Query 006581
Match_columns 639
No_of_seqs 387 out of 2671
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 03:24:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006581.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006581hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 4E-119 1E-123 1014.5 52.5 604 1-632 31-646 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 2E-110 8E-115 945.8 51.0 590 1-632 29-621 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.1E-81 3.8E-86 739.4 44.1 520 1-630 24-605 (926)
4 1y9z_A Alkaline serine proteas 100.0 1.7E-53 5.9E-58 464.1 22.3 334 70-508 58-436 (441)
5 3afg_A Subtilisin-like serine 100.0 3.2E-51 1.1E-55 454.3 29.3 267 1-488 146-418 (539)
6 1dbi_A AK.1 serine protease; h 100.0 3.2E-49 1.1E-53 404.6 22.7 242 1-487 38-279 (280)
7 4h6x_A Thiazoline oxidase/subt 100.0 1.3E-50 4.5E-55 429.2 11.0 291 1-487 38-337 (357)
8 1r0r_E Subtilisin carlsberg; h 100.0 6.8E-49 2.3E-53 401.1 20.7 214 71-487 57-274 (274)
9 1gci_A Subtilisin; hydrolase, 100.0 1.3E-48 4.4E-53 397.5 22.4 215 70-487 55-269 (269)
10 1thm_A Thermitase; hydrolase(s 100.0 1.9E-48 6.3E-53 398.9 23.3 242 1-487 37-278 (279)
11 1to2_E Subtilisin BPN'; serine 100.0 1.9E-48 6.4E-53 399.1 21.4 214 72-488 59-276 (281)
12 3zxy_A Subtilisin-like protein 100.0 2.1E-49 7.3E-54 407.1 13.1 223 73-487 47-274 (282)
13 2x8j_A Intracellular subtilisi 100.0 4.3E-48 1.5E-52 404.7 20.0 247 1-487 48-310 (327)
14 3lxu_X Tripeptidyl-peptidase 2 100.0 2.1E-47 7.1E-52 445.6 27.8 353 72-629 267-651 (1354)
15 2z2z_A TK-subtilisin precursor 100.0 2.3E-48 7.9E-53 417.7 15.4 248 1-487 111-391 (395)
16 2ixt_A 36KDA protease; serine 100.0 7.8E-47 2.7E-51 393.5 24.9 264 1-482 33-309 (310)
17 2z30_A TK-subtilisin; thermoco 100.0 1.1E-47 3.9E-52 401.0 16.5 248 1-487 36-316 (320)
18 4h6w_A N-terminal cyanobactin 100.0 9.5E-48 3.2E-52 399.9 13.6 225 71-487 58-287 (306)
19 1r6v_A Subtilisin-like serine 100.0 6.1E-47 2.1E-51 424.8 19.3 247 70-496 193-447 (671)
20 2iy9_A SUBA; toxin, shiga, pla 100.0 4.6E-47 1.6E-51 401.4 16.2 254 1-488 51-329 (347)
21 3t41_A Epidermin leader peptid 100.0 1.3E-46 4.3E-51 414.4 18.8 222 68-488 192-465 (471)
22 1wmd_A Protease; alpha-beta hy 100.0 9.3E-46 3.2E-50 402.7 20.8 249 70-489 61-319 (434)
23 3lpc_A APRB2; protease, subtil 100.0 3.9E-45 1.3E-49 385.8 18.1 227 69-488 96-337 (340)
24 1sh7_A Extracellular subtilisi 100.0 3E-44 1E-48 368.0 22.9 218 1-453 36-256 (284)
25 2pwa_A Proteinase K; structure 100.0 1.6E-44 5.4E-49 369.2 18.1 214 1-453 38-259 (279)
26 2oxa_A Extracellular serine pr 100.0 2.9E-44 1E-48 405.7 20.6 254 70-490 107-427 (600)
27 2b6n_A Proteinase K; S binding 100.0 8.7E-44 3E-48 364.1 20.9 220 1-453 38-260 (278)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 1.3E-43 4.4E-48 362.9 21.5 219 1-454 38-259 (276)
29 2qtw_B Proprotein convertase s 100.0 7.4E-43 2.5E-47 379.7 18.5 231 70-487 67-313 (546)
30 2id4_A Kexin; KEX2, kexin, fur 100.0 2.5E-42 8.7E-47 381.4 22.7 232 72-488 95-342 (503)
31 1p8j_A Furin precursor; prohor 100.0 4.8E-43 1.6E-47 384.7 16.8 239 70-488 80-330 (471)
32 3f7m_A Alkaline serine proteas 100.0 9.4E-43 3.2E-47 357.0 17.4 214 1-453 39-260 (279)
33 2p4e_P Proprotein convertase s 100.0 3.7E-44 1.3E-48 399.7 0.0 197 70-453 219-422 (692)
34 3hjr_A Extracellular serine pr 100.0 4.2E-41 1.4E-45 381.2 24.0 275 71-488 109-425 (600)
35 1ga6_A Serine-carboxyl protein 99.8 2.9E-21 9.9E-26 203.8 12.4 102 104-206 90-207 (372)
36 1t1e_A Kumamolisin; proenzyme, 99.8 6.7E-21 2.3E-25 210.9 10.1 99 101-206 272-384 (552)
37 3edy_A Tripeptidyl-peptidase 1 99.0 7.8E-10 2.7E-14 121.6 11.2 101 104-206 262-375 (544)
38 3icu_A E3 ubiquitin-protein li 98.7 6.3E-08 2.2E-12 91.2 11.4 91 254-346 82-187 (194)
39 2ek8_A Aminopeptidase; metallo 96.7 0.0059 2E-07 65.3 11.0 69 263-333 108-182 (421)
40 3iib_A Peptidase M28; YP_92679 95.8 0.028 9.7E-07 60.3 10.2 80 265-346 124-227 (444)
41 3kas_A Transferrin receptor pr 95.3 0.027 9.4E-07 62.9 7.8 66 266-333 128-230 (640)
42 3fed_A Glutamate carboxypeptid 94.8 0.024 8.2E-07 64.1 5.4 68 265-334 150-268 (707)
43 2ys4_A Hydrocephalus-inducing 94.7 0.1 3.5E-06 45.1 8.3 74 545-626 40-114 (122)
44 2e6j_A Hydin protein; PAPD, st 87.7 0.79 2.7E-05 38.5 5.6 66 535-601 13-81 (112)
45 1y9z_A Alkaline serine proteas 87.3 0.35 1.2E-05 51.7 3.8 31 352-390 181-211 (441)
46 2r39_A FIXG-related protein; s 85.5 4.1 0.00014 34.6 9.1 54 547-602 32-85 (118)
47 3qbt_B Inositol polyphosphate 83.9 11 0.00037 33.0 11.3 83 546-629 43-136 (140)
48 2qsv_A Uncharacterized protein 83.2 7.9 0.00027 36.7 10.9 80 546-629 19-104 (220)
49 3qis_A Inositol polyphosphate 73.7 10 0.00035 39.0 9.1 56 546-602 46-105 (366)
50 3e9t_A Na/Ca exchange protein; 73.1 34 0.0011 28.6 10.6 94 535-632 8-109 (114)
51 1m1s_A WR4; structural genomic 70.4 48 0.0016 27.9 11.7 50 549-601 26-75 (116)
52 3idu_A Uncharacterized protein 64.3 26 0.0009 30.0 8.1 51 545-599 32-83 (127)
53 2qsv_A Uncharacterized protein 64.2 61 0.0021 30.4 11.7 77 546-627 134-217 (220)
54 3zyz_A Beta-D-glucoside glucoh 62.5 15 0.00051 41.5 7.9 52 547-601 614-674 (713)
55 3ead_A Na/Ca exchange protein; 58.8 57 0.0019 28.1 9.5 63 534-599 9-77 (137)
56 3isy_A Bsupi, intracellular pr 56.2 76 0.0026 26.8 9.5 69 544-614 16-102 (120)
57 4ay0_A Chaperone protein CAF1M 56.2 75 0.0025 29.9 10.5 61 546-607 26-91 (218)
58 2kq1_A BH0266 protein; solutio 55.0 2.5 8.4E-05 36.1 -0.1 54 548-601 55-110 (119)
59 1msp_A MSP, major sperm protei 53.3 37 0.0013 28.9 7.2 51 547-600 26-76 (126)
60 1w8o_A Bacterial sialidase; 3D 53.2 83 0.0028 34.2 12.1 67 535-605 363-430 (601)
61 1z9l_A Vesicle-associated memb 52.5 38 0.0013 28.8 7.2 53 546-601 27-79 (128)
62 1row_A SSP-19, MSP-domain prot 52.2 61 0.0021 26.8 8.2 50 549-601 18-67 (109)
63 2x41_A Beta-glucosidase; hydro 51.4 26 0.00089 39.5 7.6 69 530-601 594-677 (721)
64 3q48_A Chaperone CUPB2; IG fol 49.9 1.1E+02 0.0038 29.5 10.9 55 546-601 42-104 (257)
65 1wic_A Hypothetical protein ri 49.3 42 0.0014 29.7 7.1 53 546-601 35-87 (152)
66 3abz_A Beta-glucosidase I; gly 46.7 1.2E+02 0.0041 34.8 12.1 67 530-599 714-795 (845)
67 1wgl_A TOLL-interacting protei 44.2 13 0.00044 27.3 2.4 34 419-452 5-38 (59)
68 2cri_A Vesicle-associated memb 42.9 49 0.0017 29.0 6.5 53 546-601 31-83 (147)
69 2xg5_A PAPD, chaperone protein 41.5 2.2E+02 0.0076 26.5 11.6 54 546-600 14-73 (218)
70 4djm_A DRAB; chaperone, PILI; 39.0 2.6E+02 0.0089 26.5 12.2 60 546-606 36-98 (239)
71 3fso_A Integrin beta-4, GP150; 38.5 1.8E+02 0.006 24.4 9.2 63 534-599 10-78 (123)
72 3gin_A Sodium/calcium exchange 37.3 1.9E+02 0.0065 25.6 9.6 64 533-599 26-96 (160)
73 3gfu_C Chaperone protein FAEE; 37.0 2.1E+02 0.0072 26.9 10.3 60 546-607 14-79 (224)
74 2co7_B SAFB chaperone, putativ 34.6 2.9E+02 0.0099 25.8 11.8 91 546-637 26-131 (221)
75 1ni7_A ER75, hypothetical prot 30.9 36 0.0012 30.3 3.6 32 412-444 78-109 (155)
76 4ep8_B Urease subunit beta; al 30.1 71 0.0024 25.9 4.7 17 546-562 18-34 (101)
77 3sd2_A Putative member of DUF3 28.3 2.4E+02 0.0082 22.9 7.9 64 538-614 35-99 (101)
78 2l0d_A Cell surface protein; s 27.8 1.7E+02 0.0058 24.4 7.0 25 545-569 18-43 (114)
79 3rfr_A PMOB; membrane, oxidore 27.7 4.6E+02 0.016 26.8 11.3 85 545-636 297-414 (419)
80 3g0m_A Cysteine desulfuration 26.3 35 0.0012 29.8 2.6 33 411-444 70-102 (141)
81 2l04_A Major tail protein V; b 24.8 65 0.0022 25.7 3.7 28 575-603 8-35 (91)
82 1yew_A Particulate methane mon 24.5 2.1E+02 0.0072 28.9 8.1 54 545-600 263-336 (382)
83 2qvk_A CBD2, sodium/calcium ex 24.3 2.6E+02 0.0091 25.5 8.3 63 534-599 10-79 (192)
84 3lyw_A YBBR family protein; st 24.3 48 0.0016 26.5 2.8 38 548-585 43-81 (90)
85 4ac7_B Urease subunit beta; hy 22.9 96 0.0033 26.2 4.4 17 546-562 24-40 (126)
86 4ubp_B Protein (urease (chain 22.9 96 0.0033 26.2 4.4 17 546-562 24-40 (126)
87 1otr_A Protein CUE2; protein-p 21.4 84 0.0029 22.0 3.3 26 426-451 7-32 (49)
88 3us9_A Sodium/calcium exchange 21.4 3.4E+02 0.012 26.6 9.1 64 534-600 145-215 (295)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=3.8e-119 Score=1014.54 Aligned_cols=604 Identities=37% Similarity=0.622 Sum_probs=543.0
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.++++.++|.+|+|.|+.+.+|+...||+|++++++|.+++..... ....+..+++|..|||||
T Consensus 31 iDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~~~~~~~~~----~~~~~~~~~~D~~GHGTh 106 (649)
T 3i6s_A 31 LDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFNKGILANDP----TVNITMNSARDTDGHGTH 106 (649)
T ss_dssp EESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECCHHHHHHCT----TCCCTTCSSBCSSSHHHH
T ss_pred EccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEeccCccccccc----ccccCCCCCCCCCCcHHH
Confidence 7999999999999999999999999999999999999999999999999977654321 123456688999999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccCCCCCCCCCccc
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLGSSLPLSTYVDD 160 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~ 160 (639)
|||||||+..++.+.+|++.+.+.||||+|+|++||+++.. ++..+++++||+||+++|+||||||||... ..+..+
T Consensus 107 VAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~-g~~~~~i~~Ai~~A~~~gvdVIn~SlG~~~--~~~~~~ 183 (649)
T 3i6s_A 107 CASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE-GTFTSDLIAAMDQAVADGVDMISISYGYRF--IPLYED 183 (649)
T ss_dssp HHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETT-EECHHHHHHHHHHHHHTTCSEEEECCCCCS--CCGGGC
T ss_pred HHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCC-CCCHHHHHHHHHHHHHcCCCEEEeCCccCC--cccchh
Confidence 99999999988888888888889999999999999999984 499999999999999999999999999873 347789
Q ss_pred hHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCceeeeE
Q 006581 161 IISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKFYPIV 240 (639)
Q Consensus 161 ~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~pl~ 240 (639)
++.+++++|+++|++||+||||+|+...++.+.+||+|+|||++.+|.|...+.+++++.+.|.+++.... ....+|++
T Consensus 184 ~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lgng~~~~g~sl~~~~~-~~~~~plv 262 (649)
T 3i6s_A 184 AISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLGNGLKIRGWSLFPARA-FVRDSPVI 262 (649)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEETTSCEEEEECCCSSCB-CEEEEEEE
T ss_pred HHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeCCCcEEeeeecccCcc-cCcceeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987765 46689999
Q ss_pred EccccccCCCCccccCccCCCCCCCccc--cccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccEE
Q 006581 241 IGKDIATFDADEGSARSCESGTLNATLV--RGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPYI 318 (639)
Q Consensus 241 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~~ 318 (639)
+.. ....|.+..++..++ +||||+|.| |.|.+.+|..+++++|+.|+|++++........+.+|++
T Consensus 263 ~~~----------~~~~C~~~~l~~~~vdl~GkIvlc~~--g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~P~~ 330 (649)
T 3i6s_A 263 YNK----------TLSDCSSEELLSQVENPENTIVICDD--NGDFSDQMRIITRARLKAAIFISEDPGVFRSATFPNPGV 330 (649)
T ss_dssp CCT----------TTTTCCCHHHHTTSSSGGGCEEEECC--CSCHHHHHHHHHHHTCSEEEEECCCGGGGGCCCCCSCEE
T ss_pred ecc----------cccccccccccccccccCCcEEEEeC--CCccHHHHHHHHHhcCceEEEEecCccccccccCcCCEE
Confidence 864 357899888888777 999999999 899999999999999999999999884446678899999
Q ss_pred EEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCccCC
Q 006581 319 QVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQTD 398 (639)
Q Consensus 319 ~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~ 398 (639)
.++..+++.|++|++++.+++++|.+..++.+....+.++.||||||+...+++|||||+|||++|+|+|+.........
T Consensus 331 ~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~ 410 (649)
T 3i6s_A 331 VVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIG 410 (649)
T ss_dssp EECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEET
T ss_pred EEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEEeCCCCeEeecCCCCCccccc
Confidence 99999999999999999999999999999988888999999999999997789999999999999999999754433222
Q ss_pred CCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCCCCCCCCC
Q 006581 399 HVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQADPFDYGGG 478 (639)
Q Consensus 399 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G 478 (639)
.+. + +...|..+||||||||||||++|||||+||+|+|++||++||+||.++++.+.|+.++ ....++++++||+|
T Consensus 411 ~d~--~-~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~-~~~~~a~~~~~GaG 486 (649)
T 3i6s_A 411 TNI--L-LSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDS-DNNKAATPLDMGAG 486 (649)
T ss_dssp TTE--E-ECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEET-TTSSBCCHHHHTTC
T ss_pred ccc--c-cccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCccccc-ccCCcCCcCCCCee
Confidence 220 0 1378999999999999999999999999999999999999999999999999999886 25678899999999
Q ss_pred CCCcCCcCCCCeeeeCcccchhhhhhcCCCCccceeecccCccc--ccCCCccccccCCcCeEEecc-cCcc-----EEE
Q 006581 479 HVDPNKAMDPGLVYDMEVSDYVRFLCAMGYNNSAISLMNRASTT--CNDKSTKFLVNLNLPSITIPE-LKKS-----ITV 550 (639)
Q Consensus 479 ~id~~~A~~~~lv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ln~ps~~~~~-~~~~-----~~~ 550 (639)
+||+.+|++||||||++.+||+.|||++||+..+|+.|++.+.. |+. ...+||||||++.. +.+. ++|
T Consensus 487 ~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~----~~~~lNyPs~~~~~~~~~~~~~~~~~~ 562 (649)
T 3i6s_A 487 HVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN----PSADLNYPSFIALYSIEGNFTLLEQKF 562 (649)
T ss_dssp BCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC----CCCCCCCSSEEEEECCSSCCCCEEEEE
T ss_pred eeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC----chhhcCCCcEEeecccCCCCccceEEE
Confidence 99999999999999999999999999999999999999998877 974 56799999999987 5666 899
Q ss_pred EEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEeecCCCceEEEEEEEEc--CceEEEEeEEE
Q 006581 551 SRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQGRYSFGNLFWED--GIHVVRIPLIV 628 (639)
Q Consensus 551 ~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~~~--~~~~v~~P~~~ 628 (639)
+|||||||+...+|++.++.|.|++|+|+|++|+|.+.+|+++|+|+|+......+.|.||+|+|++ +.|.||+||+|
T Consensus 563 ~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w~~~~~~h~vrsPi~v 642 (649)
T 3i6s_A 563 KRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQNGNHSVRSPIVT 642 (649)
T ss_dssp EEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEEEETTSCCEEEEEEEE
T ss_pred EEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEEEEEEEEcCCCCeEEEEeEEE
Confidence 9999999998999999999999999999999999988899999999999765556778999999999 89999999999
Q ss_pred EeEe
Q 006581 629 RTII 632 (639)
Q Consensus 629 ~~~~ 632 (639)
+.++
T Consensus 643 ~~~~ 646 (649)
T 3i6s_A 643 SPII 646 (649)
T ss_dssp EECC
T ss_pred EEcc
Confidence 8753
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=2.4e-110 Score=945.81 Aligned_cols=590 Identities=43% Similarity=0.738 Sum_probs=495.1
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
|||||||+||+|+|++++++|.+|+|.|+.+.+|. ||+|++++++|..+.... ..+..+|+|.+|||||
T Consensus 29 iDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~---~n~k~ig~~~~~~~~~~~--------~~~~~~p~D~~GHGTH 97 (621)
T 3vta_A 29 LDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYHIGRPIS--------PGDVNGPRDTNGHGTH 97 (621)
T ss_dssp EESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCC---CCSSEEEEEECCCSSSCC--------TTCCSSSBCSSSHHHH
T ss_pred EecCCCCCChhhcCCCCCCcccccccccccCCCcc---cCcceeeeeecccCCccC--------CCCCCCCCCCCcCHHH
Confidence 79999999999999999999999999999998886 999999999998764432 3455689999999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccCCCCCCCCCccc
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLGSSLPLSTYVDD 160 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~ 160 (639)
|||||||+..++.+..|++.+.++||||+|+|++||+|++ .+|..+++++||++|+++|+||||||||+.. +.++..+
T Consensus 98 vAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~-~g~~~~di~~a~~~a~~~g~dVin~SlG~~~-~~~~~~~ 175 (621)
T 3vta_A 98 TASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWN-DGCSDTDILAAYDDAIADGVDIISLSVGGAN-PRHYFVD 175 (621)
T ss_dssp HHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEET-TEECHHHHHHHHHHHHHHTCSEEEECCCCCC-GGGGGGC
T ss_pred HHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecC-CCCCHHHHHHHHHHHHHhCCCEEEecCCCCC-CCCcCCc
Confidence 9999999998888888888888999999999999999998 5688999999999999999999999999886 5557788
Q ss_pred hHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCceeeeE
Q 006581 161 IISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKFYPIV 240 (639)
Q Consensus 161 ~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~pl~ 240 (639)
++++++++|+++||+||+||||+|+...++.+.+||+++|++++.++.+...+.++++..+.+.++... ....++++
T Consensus 176 ~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s~~~~---~~~~~~~~ 252 (621)
T 3vta_A 176 AIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINTF---DNQYYPLV 252 (621)
T ss_dssp THHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEEEBCCCCS---CCEEECEE
T ss_pred HHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceeeeeecccC---CCcccccc
Confidence 999999999999999999999999999999999999999999999999999999999999988877543 34577888
Q ss_pred EccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccEEEE
Q 006581 241 IGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPYIQV 320 (639)
Q Consensus 241 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~~~i 320 (639)
+..+.............|.+..+++.+++|||++|.+. +..+..+....|+.++|++++... ..+.+.+|...+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~-----~~~~~~~~~~~Ga~gvi~~~~~~~-~~~~~~lP~~~v 326 (621)
T 3vta_A 253 SGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS-----FGPHEFFKSLDGAAGVLMTSNTRD-YADSYPLPSSVL 326 (621)
T ss_dssp ETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC-----CCHHHHHHHHTTCSEEEEECSCCS-SCCCCSSSEEEE
T ss_pred cccccccccccccccccccccccccccccceEEEEecC-----CChhHHhhhhcceeEEEEEecCCC-cccccccceEEE
Confidence 87765555555566778999999999999999999762 335666778889999999987654 345678999999
Q ss_pred chhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCccCCCC
Q 006581 321 DFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQTDHV 400 (639)
Q Consensus 321 ~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~ 400 (639)
+..++..++.|+..+..+...+....+.. +...+.++.||||||+...++++||||+|||++|+|+++.........
T Consensus 327 ~~~~g~~i~~~~~~~~~~~a~~~~~~~~~-~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~-- 403 (621)
T 3vta_A 327 DPNDLLATLRYIYSIRSPGATIFKSTTIL-NASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVGGIR-- 403 (621)
T ss_dssp CHHHHHHHHHHHHHHSSCCEEECCCEEEE-CTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCSSSCBTTBC--
T ss_pred CHHHHHHHHHHHhccCCcceEEecceEec-cCCCCceeeecCCCCCCCCCCeeccccccCCcceEeecCccccccCcC--
Confidence 99999999999999998888876655544 456789999999999987789999999999999999998654332211
Q ss_pred CCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCCCCCCCCCCC
Q 006581 401 TPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQADPFDYGGGHV 480 (639)
Q Consensus 401 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G~i 480 (639)
+...|..|||||||||||||+||||||+||+|+|++||++||+||++++.. ..++.+++||+|+|
T Consensus 404 -----~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~----------~~~~~~~~~GaG~v 468 (621)
T 3vta_A 404 -----RNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNAR----------FNPQAEFAYGSGHV 468 (621)
T ss_dssp -----CCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTT----------TCTTTHHHHTTCBC
T ss_pred -----CCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCccccc----------CCCCCchhcCCCcc
Confidence 157899999999999999999999999999999999999999999977543 34567789999999
Q ss_pred CcCCcCCCCeeeeCcccchhhhhhcCCCCccceeecccCcccccCCCccccccCCcCeEEec---ccCccEEEEEEEEEc
Q 006581 481 DPNKAMDPGLVYDMEVSDYVRFLCAMGYNNSAISLMNRASTTCNDKSTKFLVNLNLPSITIP---ELKKSITVSRQVTNV 557 (639)
Q Consensus 481 d~~~A~~~~lv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~---~~~~~~~~~~tvtn~ 557 (639)
|+.+|++||||||++.+||+.|||+++|+.++++.+++....|+........+||||||++. ++..+++|+|||||+
T Consensus 469 ~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnv 548 (621)
T 3vta_A 469 NPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSV 548 (621)
T ss_dssp CHHHHSCCSEECCCCGGGCC-----------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEEC
T ss_pred CHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcccccccccEEEEccCCCceEEEEEEEEEcc
Confidence 99999999999999999999999999999999999999988998766677899999999985 455789999999999
Q ss_pred CCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEeecCCCceEEEEEEEEcCceEEEEeEEEEeEe
Q 006581 558 SPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQGRYSFGNLFWEDGIHVVRIPLIVRTII 632 (639)
Q Consensus 558 ~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~~~~~~~v~~P~~~~~~~ 632 (639)
|....+|+++++.|+|++|+|+|++|+|.+.+|+++|+|+|+. ..++.|+||+|+|+++.|.||+||+|+..|
T Consensus 549 g~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~--~~~~~~~~g~l~w~d~~h~Vr~Pi~v~~~i 621 (621)
T 3vta_A 549 APQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG--SIKGFVVSASLVWSDGVHYVRSPITITSLV 621 (621)
T ss_dssp SSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEE--CCCSSEEEEEEEEECSSCCCEEEEEEECC-
T ss_pred CCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEe--cCCCceEEEEEEEEcCCEEEEeCEEEEEeC
Confidence 9999999999999999999999999999988999999999975 467889999999999999999999999765
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.1e-81 Score=739.41 Aligned_cols=520 Identities=23% Similarity=0.266 Sum_probs=409.0
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCc----------CCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCC
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGF----------NRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLS 70 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f----------~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (639)
||||||++||+|++. ..|++.|..+..| ...+||+|++++++|.++. .
T Consensus 24 IDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~----------------~ 81 (926)
T 1xf1_A 24 IDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDG----------------K 81 (926)
T ss_dssp EESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCS----------------C
T ss_pred EecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccCC----------------C
Confidence 799999999999853 4566666432211 1346999999999997641 1
Q ss_pred CCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCC-CCHHHHHHHHHHHHhCCCcEEEEccC
Q 006581 71 PRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGG-CSSADLLAAFDDATFDGVDVISLSLG 149 (639)
Q Consensus 71 ~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~-~~~~~i~~ai~~a~~~g~dVIn~SlG 149 (639)
..|..||||||||||||+...+.+. ++.+.||||+|+|++||+|+..+. +..+++++||++|+++|+||||||||
T Consensus 82 ~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~Ai~~gvdVIn~SlG 157 (926)
T 1xf1_A 82 TAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRDAINLGAKVINMSFG 157 (926)
T ss_dssp CCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHHHHHhCCcEEEECCC
Confidence 2288999999999999987554321 346799999999999999987432 45678999999999999999999999
Q ss_pred CCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCC-------------CCcccCC--CCcEEEEEeeccCCccceEEE
Q 006581 150 SSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPY-------------PQTVINT--APWVITVAASTIDRAFPTAIT 214 (639)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------------~~~~~~~--ap~vitVgA~~~~~~~~~~~~ 214 (639)
......+...+.+..++++|+++||+||+||||+|+. ..++.++ +||+|+|||++.++.+...+.
T Consensus 158 ~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~~~~~~~~~~~ 237 (926)
T 1xf1_A 158 NAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQLTETVR 237 (926)
T ss_dssp SCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEBCSEEEEEEEE
T ss_pred CCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEeccccccccccceE
Confidence 8742233456788999999999999999999999963 2334444 799999999999999988888
Q ss_pred e-CCceEEEeEEeecC-cCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhh
Q 006581 215 M-GNNQTVVGQAFYNG-KEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVL 292 (639)
Q Consensus 215 ~-~~~~~~~g~~~~~~-~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~ 292 (639)
+ +++....+.++... .++....+|+++... .|.+..+ .+++||||+|+| |.|.+.+|..+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~------------g~~~~~~--~~v~Gkivl~~r--g~~~~~~k~~~~~ 301 (926)
T 1xf1_A 238 VKTADQQDKEMPVLSTNRFEPNKAYDYAYANR------------GTKEDDF--KDVKGKIALIER--GDIDFKDKIAKAK 301 (926)
T ss_dssp EECTTSCEEEEEEEEESCCCTTCCEEEEECTT------------SCSTTTT--TTCTTSEEEEEC--CSSCHHHHHHHHH
T ss_pred EEcCCCcceeeEEEecCCCCCCceEEEEECCC------------CCCccch--hhcCCeEEEEEC--CCCCHHHHHHHHH
Confidence 7 55544444444332 222456789988643 3665555 689999999999 8999999999999
Q ss_pred cCCceEEEEecCCCCC----CCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCC
Q 006581 293 DSGGVGLIFAKFPTKD----VHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSL 368 (639)
Q Consensus 293 ~~Ga~g~i~~~~~~~~----~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~ 368 (639)
++|++|+|++++.... ......+|+..++..++.+|++ ....++++............+.++.||||||+.
T Consensus 302 ~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~- 376 (926)
T 1xf1_A 302 KAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPTASGTKLSRFSSWGLTA- 376 (926)
T ss_dssp HTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEECSSCSBCCTTSCCCBCT-
T ss_pred hCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceecccCCcceeccccCCCCCC-
Confidence 9999999999887543 3466889999999999998874 444444444444345566678999999999997
Q ss_pred CCCCcCCceEcCCCcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHh----hCCCCCHHH---
Q 006581 369 SPSVLKPDIAAPGVNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKA----IHPTWSPAA--- 441 (639)
Q Consensus 369 ~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~ls~~~--- 441 (639)
++++||||+|||++|+|+++ ++.|..+||||||||||||+||||+| .||+|+|+|
T Consensus 377 -~~~lKPDI~APG~~I~sa~~-----------------~~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~ 438 (926)
T 1xf1_A 377 -DGNIKPDIAAPGQDILSSVA-----------------NNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLD 438 (926)
T ss_dssp -TSCBSCCEEEECCCEEESSS-----------------CSSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHH
T ss_pred -CCccCceEECCCCCEEeecc-----------------CCcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHH
Confidence 99999999999999999997 47899999999999999999999964 599999997
Q ss_pred -HHHHHHhcCccCCcCCccccccCCCCCCCCCCCCCCCCCCcCCcCCCCeeeeCcccchhhhhhcCCCCccceeecccCc
Q 006581 442 -IKSAIVTTASLKDEYAQSIVAEGAPHKQADPFDYGGGHVDPNKAMDPGLVYDMEVSDYVRFLCAMGYNNSAISLMNRAS 520 (639)
Q Consensus 442 -vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 520 (639)
||++||+||++++..+ ....+++++||+|+||+.+|+++.+ |||..+++..
T Consensus 439 ~Iks~L~~TA~~~~~~~--------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~--------- 490 (926)
T 1xf1_A 439 LAKKVLMSSATALYDED--------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS--------- 490 (926)
T ss_dssp HHHHHHHHHSBCCEEGG--------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS---------
T ss_pred HHHHHHHhcCCCcccCC--------CCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc---------
Confidence 9999999999764321 1235678899999999999999854 5677654332
Q ss_pred ccccCCCccccccCCcCeEEecccCccEEEEEEEEEcCCCC--eeEEEEEeC--CCCceEEEecCeEEEc-------CCC
Q 006581 521 TTCNDKSTKFLVNLNLPSITIPELKKSITVSRQVTNVSPMN--SVYTARVQA--PAGTTVRVEPSTLTFN-------STR 589 (639)
Q Consensus 521 ~~~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~tvtn~~~~~--~ty~~~~~~--~~g~~v~v~p~~~~~~-------~~g 589 (639)
+|.+.++.+.++++|||||+|+.+ .+|++++.. |.+..++|+|..|.+. ++|
T Consensus 491 -----------------~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag 553 (926)
T 1xf1_A 491 -----------------KVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPAN 553 (926)
T ss_dssp -----------------CEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTT
T ss_pred -----------------eeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCC
Confidence 345555566889999999999754 567777764 6788888888766554 359
Q ss_pred cEEEEEEEEEEee--------cCCCceEEEEEEEEc--Cce-EEEEeEEEEe
Q 006581 590 KKLKFKVTFYSRL--------RVQGRYSFGNLFWED--GIH-VVRIPLIVRT 630 (639)
Q Consensus 590 ~~~~~~v~~~~~~--------~~~~~~~~G~i~~~~--~~~-~v~~P~~~~~ 630 (639)
|+++|+|+|++.. .+++.|+||+|+|++ +.| .||+||+++.
T Consensus 554 ~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 554 SSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred CEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 9999999999751 246679999999994 555 5999999975
No 4
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=1.7e-53 Score=464.11 Aligned_cols=334 Identities=21% Similarity=0.285 Sum_probs=246.6
Q ss_pred CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCC--eEEEEEeecCCCCCCHHHHHHHHHHHHhC-CCcEEEE
Q 006581 70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLA--WLAIYKICWAPGGCSSADLLAAFDDATFD-GVDVISL 146 (639)
Q Consensus 70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A--~L~~~kv~~~~~~~~~~~i~~ai~~a~~~-g~dVIn~ 146 (639)
++.|..||||||||||+|... +.++.||||+| +|+.+|+++..+.+..+++++||+||+++ |++||||
T Consensus 58 ~~~d~~gHGT~vAgiia~~~~---------~~g~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~Vin~ 128 (441)
T 1y9z_A 58 QPGNNNAHGTHVAGTIAAIAN---------NEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTM 128 (441)
T ss_dssp CCCSSCCHHHHHHHHHHCCCS---------SSBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCCCCcHHHHHHHHhcccC---------CCCceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcEEEe
Confidence 567889999999999999852 12468999995 99999999876667888999999999999 9999999
Q ss_pred ccCCCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCC---------
Q 006581 147 SLGSSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGN--------- 217 (639)
Q Consensus 147 SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~--------- 217 (639)
|||... ....+..++.++.++|++||+||||+|......+...+++|+|||++.+.....+...+.
T Consensus 129 S~G~~~-----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG~ 203 (441)
T 1y9z_A 129 SLGGSG-----STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGE 203 (441)
T ss_dssp CCCBSC-----CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEECS
T ss_pred CCCCCC-----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEeccC
Confidence 999873 234677888999999999999999999877777778899999999987754322211111
Q ss_pred ----------ce----EEEeEEeecCcC-CCCceee--eEEccccccCCCCccccCccCCC--CCCCccccccEEEEEeC
Q 006581 218 ----------NQ----TVVGQAFYNGKE-DLNKFYP--IVIGKDIATFDADEGSARSCESG--TLNATLVRGKIVICFQS 278 (639)
Q Consensus 218 ----------~~----~~~g~~~~~~~~-~~~~~~p--l~~~~~~~~~~~~~~~~~~c~~~--~~~~~~~~gkivl~~~~ 278 (639)
++ .+.|.+++.... +....++ +.+..... ..........|... .++..+++|||++|+|
T Consensus 204 ~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~-~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~r- 281 (441)
T 1y9z_A 204 AILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPI-NASATGALAECTVNGTSFSCGNMANKICLVER- 281 (441)
T ss_dssp SEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCC-CCEEEEEEEEEEEETTEEECCCCTTEEEEEEC-
T ss_pred CeeccccCCCcccceeecccccccccccCcccccccCCcccccccc-ccccccchhccccccccccCCCccccEEEEec-
Confidence 11 122222211100 0000000 11111100 00001123457753 5677899999999999
Q ss_pred CCc-----chHHHHHHhhhcCCceEEEEecCCCCC---------CCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEe
Q 006581 279 QFQ-----RSAATAARTVLDSGGVGLIFAKFPTKD---------VHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSF 344 (639)
Q Consensus 279 ~g~-----~~~~~k~~~~~~~Ga~g~i~~~~~~~~---------~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~ 344 (639)
+. +.+.+|..+++++|+.++|++++.... ......+|.+.++..+++.|+.|+.++ +
T Consensus 282 -g~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~---- 352 (441)
T 1y9z_A 282 -VGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----T---- 352 (441)
T ss_dssp -CSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----E----
T ss_pred -cccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----c----
Confidence 54 478899999999999999999876432 123467999999999999999876321 0
Q ss_pred ceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHH
Q 006581 345 TKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHIS 424 (639)
Q Consensus 345 ~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VA 424 (639)
.+ ++.. .+.|..++||||||||||
T Consensus 353 -------------------------------t~--------~~~~-----------------~~~y~~~sGTSmAaP~VA 376 (441)
T 1y9z_A 353 -------------------------------TV--------SNQG-----------------NQDYEYYNGTSMATPHVS 376 (441)
T ss_dssp -------------------------------EE--------EEEE-----------------EESEEEECSHHHHHHHHH
T ss_pred -------------------------------cc--------cccc-----------------CCCceeecccccCCcccc
Confidence 00 1111 478999999999999999
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCCCCCCCCCCCCcCCcCCCCeeeeCcccchhhhhh
Q 006581 425 GIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQADPFDYGGGHVDPNKAMDPGLVYDMEVSDYVRFLC 504 (639)
Q Consensus 425 G~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~~~~~~~l~ 504 (639)
|++|||+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+ ||+.|||
T Consensus 377 G~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g-------------~~~~~G~G~vn~~~A~-----------~~~~~lc 432 (441)
T 1y9z_A 377 GVATLVWSYHPECSASQVRAALNATADDLSVAG-------------RDNQTGYGMINAVAAK-----------AYLDESC 432 (441)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS-------------CBTTTBTCBCCHHHHH-----------HHHHHCT
T ss_pred hHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC-------------CcccccccccCHHHHH-----------HHHHhhh
Confidence 999999999999999999999999999765432 2457999999999996 4999999
Q ss_pred cCCC
Q 006581 505 AMGY 508 (639)
Q Consensus 505 ~~~~ 508 (639)
++++
T Consensus 433 ~~~~ 436 (441)
T 1y9z_A 433 TGPT 436 (441)
T ss_dssp TCC-
T ss_pred cCCC
Confidence 9874
No 5
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=3.2e-51 Score=454.26 Aligned_cols=267 Identities=38% Similarity=0.516 Sum_probs=218.7
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.+ ++++.++|..+ ..++.|+.|||||
T Consensus 146 iDtGid~~Hpdl~~---------------------------~i~~~~d~~~~---------------~~~~~D~~gHGTh 183 (539)
T 3afg_A 146 IDTGIDASHPDLQG---------------------------KVIGWVDFVNG---------------KTTPYDDNGHGTH 183 (539)
T ss_dssp EESBCCTTSGGGTT---------------------------TEEEEEETTTC---------------CSSCCBSSSHHHH
T ss_pred EecCCCCCChHHhC---------------------------CEeeeEECCCC---------------CCCCCCCCCCHHH
Confidence 79999999999943 35566677543 1256789999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhC----CCcEEEEccCCCCCCCC
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFD----GVDVISLSLGSSLPLST 156 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~----g~dVIn~SlG~~~~~~~ 156 (639)
|||||||+... ..+.+.||||+|+|+++|+++..+.+..+++++||+||+++ |++|||||||... ..
T Consensus 184 VAgiiag~~~~-------~~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~--~~ 254 (539)
T 3afg_A 184 VASIAAGTGAA-------SNGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQ--SS 254 (539)
T ss_dssp HHHHHHCCCGG-------GTTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCS--CC
T ss_pred HHHHHhCcCcc-------CCCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCC--CC
Confidence 99999998532 12346899999999999999876677889999999999986 9999999999874 22
Q ss_pred CccchHHHHHHHhHhCCcEEEEeccCCCCCCCcc--cCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCC
Q 006581 157 YVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTV--INTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLN 234 (639)
Q Consensus 157 ~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~--~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 234 (639)
...+.+..+++++.++|++||+||||+|+...++ +...+++|+|||++..
T Consensus 255 ~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~---------------------------- 306 (539)
T 3afg_A 255 DGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDKY---------------------------- 306 (539)
T ss_dssp CSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECTT----------------------------
T ss_pred ccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecCC----------------------------
Confidence 4567889999999999999999999999865443 4567899999975421
Q ss_pred ceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCcccc
Q 006581 235 KFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFG 314 (639)
Q Consensus 235 ~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ 314 (639)
T Consensus 307 -------------------------------------------------------------------------------- 306 (539)
T 3afg_A 307 -------------------------------------------------------------------------------- 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCC
Q 006581 315 VPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNL 394 (639)
Q Consensus 315 ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~ 394 (639)
+.++.||||||+. ++++||||+|||++|+++++.....
T Consensus 307 ----------------------------------------~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~ 344 (539)
T 3afg_A 307 ----------------------------------------DVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM 344 (539)
T ss_dssp ----------------------------------------SCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC
T ss_pred ----------------------------------------cccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC
Confidence 3778999999998 8999999999999999999753211
Q ss_pred ccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCCCCC
Q 006581 395 EQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQADPFD 474 (639)
Q Consensus 395 ~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~ 474 (639)
.. .....|..++|||||||||||++|||+|++|+|++++||++|++||+++... ..+.+.
T Consensus 345 ~~--------~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~------------~~~~~~ 404 (539)
T 3afg_A 345 GQ--------PINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPD------------EIADIA 404 (539)
T ss_dssp SE--------ECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGG------------GCSBTT
T ss_pred CC--------CCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCC------------CCCccC
Confidence 00 0024699999999999999999999999999999999999999999975321 134568
Q ss_pred CCCCCCCcCCcCCC
Q 006581 475 YGGGHVDPNKAMDP 488 (639)
Q Consensus 475 ~G~G~id~~~A~~~ 488 (639)
||+|+||+.+|++.
T Consensus 405 ~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 405 YGAGRVNAYKAAYY 418 (539)
T ss_dssp TBTCBCCHHHHHTG
T ss_pred ccCCccCHHHHhhh
Confidence 99999999999984
No 6
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=3.2e-49 Score=404.57 Aligned_cols=242 Identities=28% Similarity=0.323 Sum_probs=198.6
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.+. ++.+++|.++ ..+|.|..|||||
T Consensus 38 iDtGvd~~hp~l~~~---------------------------~~~~~~~~~~---------------~~~~~d~~gHGT~ 75 (280)
T 1dbi_A 38 IDTGVDYTHPDLDGK---------------------------VIKGYDFVDN---------------DYDPMDLNNHGTH 75 (280)
T ss_dssp EESCCCTTSTTTTTT---------------------------EEEEEETTTT---------------BSCCCCSSSHHHH
T ss_pred EeCCcCCCChhhccC---------------------------cccceeccCC---------------CCCCCCCCCcHHH
Confidence 799999999999542 3455666543 1246788999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccCCCCCCCCCccc
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLGSSLPLSTYVDD 160 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~ 160 (639)
|||||+|...++ ..+.||||+|+|+.+|++...+.+..+++++||+||+++|++|||||||... ...
T Consensus 76 vAgiia~~~~~~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~-----~~~ 142 (280)
T 1dbi_A 76 VAGIAAAETNNA--------TGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLGCDC-----HTT 142 (280)
T ss_dssp HHHHHHCCCSSS--------SSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCSSCC-----CCH
T ss_pred HHHHHhCcCCCC--------CcceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCCC-----CCH
Confidence 999999985432 2458999999999999998767788999999999999999999999999873 346
Q ss_pred hHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCceeeeE
Q 006581 161 IISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKFYPIV 240 (639)
Q Consensus 161 ~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~pl~ 240 (639)
.+..+++++.++|++||+||||+|......+...+++|+|||++..
T Consensus 143 ~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------------------------- 188 (280)
T 1dbi_A 143 TLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY---------------------------------- 188 (280)
T ss_dssp HHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT----------------------------------
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC----------------------------------
Confidence 7888889999999999999999997766667778999999975422
Q ss_pred EccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccEEEE
Q 006581 241 IGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPYIQV 320 (639)
Q Consensus 241 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~~~i 320 (639)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCccCCCC
Q 006581 321 DFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQTDHV 400 (639)
Q Consensus 321 ~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~ 400 (639)
+.++.||++||.+ ||+|||++|+++++
T Consensus 189 ----------------------------------~~~~~~S~~G~~~--------dv~ApG~~i~s~~~----------- 215 (280)
T 1dbi_A 189 ----------------------------------DRLASFSNYGTWV--------DVVAPGVDIVSTIT----------- 215 (280)
T ss_dssp ----------------------------------SCBCTTBCCSTTC--------CEEEECSSEEEEET-----------
T ss_pred ----------------------------------CCcCCCCCCCCCc--------eEEEecCCeEeecC-----------
Confidence 3678999999866 99999999999987
Q ss_pred CCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCCCCCCCCCCC
Q 006581 401 TPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQADPFDYGGGHV 480 (639)
Q Consensus 401 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G~i 480 (639)
++.|..++|||||||||||++|||++ |++++.+||++|++||+++.. ....||+|+|
T Consensus 216 ------~~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~---------------~~~~~G~G~v 272 (280)
T 1dbi_A 216 ------GNRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG---------------TGTYFKYGRI 272 (280)
T ss_dssp ------TTEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT---------------BTTTBSSEEC
T ss_pred ------CCCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC---------------CCCcccCCEE
Confidence 57899999999999999999999987 899999999999999997531 1246999999
Q ss_pred CcCCcCC
Q 006581 481 DPNKAMD 487 (639)
Q Consensus 481 d~~~A~~ 487 (639)
|+.+|++
T Consensus 273 n~~~A~~ 279 (280)
T 1dbi_A 273 NSYNAVT 279 (280)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999976
No 7
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.3e-50 Score=429.19 Aligned_cols=291 Identities=21% Similarity=0.177 Sum_probs=184.1
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|++..+.+....|+..++.....+. ..+..+.. ............. ....+..++.|.+|||||
T Consensus 38 iDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~D~~gHGTh 112 (357)
T 4h6x_A 38 IDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDY-AAFQSIRD--QGLKGKEKEEALE--AVIPDTKDRIVLNDHACH 112 (357)
T ss_dssp EESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHH-HHHHHHHH--HTCCSHHHHHHHH--HHCTTTHHHHHHHHHHHH
T ss_pred EcCCCCCCChhHcCCCcccccccccccccccCcccc-cccccccC--ccccccccccccc--cccCCCCCCcCCCCcHHH
Confidence 799999999999987666666677765442211000 00000000 0000000000000 001122345677899999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCC-----CCCCHHHHHHHHHHHHhCCCcEEEEccCCCCCCC
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAP-----GGCSSADLLAAFDDATFDGVDVISLSLGSSLPLS 155 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~-----~~~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~ 155 (639)
|||||||+.. ..+.||||+|+|+.+|++... +.....+++++|+||++.|++|||||||... ..
T Consensus 113 VAGiiag~~~----------~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~-~~ 181 (357)
T 4h6x_A 113 VTSTIVGQEH----------SPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANIIHCAFCRPT-QT 181 (357)
T ss_dssp HHHHHHCCTT----------SSCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTCSEEEEC--------
T ss_pred HHHHHhccCC----------CCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcCCCEEeeccccCC-cc
Confidence 9999999742 245899999999999997542 2344567899999999999999999999875 33
Q ss_pred CCccchHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCc
Q 006581 156 TYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNK 235 (639)
Q Consensus 156 ~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 235 (639)
....+.+..++.++.++|++||+||||+|......+...|++|+|||++.+
T Consensus 182 ~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~----------------------------- 232 (357)
T 4h6x_A 182 SEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD----------------------------- 232 (357)
T ss_dssp ----CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT-----------------------------
T ss_pred ccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC-----------------------------
Confidence 345677888999999999999999999998777777778999999985422
Q ss_pred eeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccc
Q 006581 236 FYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGV 315 (639)
Q Consensus 236 ~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~i 315 (639)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCc
Q 006581 316 PYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLE 395 (639)
Q Consensus 316 p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~ 395 (639)
+.++.|||||+.. .||||+|||++|+++++.
T Consensus 233 ---------------------------------------~~~~~fSn~G~~~-----~~~di~APG~~i~s~~~~----- 263 (357)
T 4h6x_A 233 ---------------------------------------GTPCHFSNWGGNN-----TKEGILAPGEEILGAQPC----- 263 (357)
T ss_dssp ---------------------------------------SSBCTTCC---CT-----TTTEEEEECSSEEECCTT-----
T ss_pred ---------------------------------------CcccccccCCCCC-----CccceeecCCCeEeccCC-----
Confidence 4778999999754 599999999999999874
Q ss_pred cCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCC
Q 006581 396 QTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKA----IHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQAD 471 (639)
Q Consensus 396 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~ 471 (639)
++.|..++|||||||||||++|||++ ++|.|+++|||++|++||++++. .....
T Consensus 264 -----------~~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~-----------~~~~~ 321 (357)
T 4h6x_A 264 -----------TEEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDP-----------EVVEE 321 (357)
T ss_dssp -----------CSCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC----------------------
T ss_pred -----------CCcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCC-----------CCCCC
Confidence 46778899999999999999999995 45789999999999999996532 12334
Q ss_pred CCCCCCCCCCcCCcCC
Q 006581 472 PFDYGGGHVDPNKAMD 487 (639)
Q Consensus 472 ~~~~G~G~id~~~A~~ 487 (639)
+.+||+|+||+.+|++
T Consensus 322 ~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 322 PERCLRGFVNIPGAMK 337 (357)
T ss_dssp ---CTTCBCCHHHHHH
T ss_pred cccceeEEecHHHHHH
Confidence 5679999999999987
No 8
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=6.8e-49 Score=401.09 Aligned_cols=214 Identities=30% Similarity=0.421 Sum_probs=184.6
Q ss_pred CCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccCC
Q 006581 71 PRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLGS 150 (639)
Q Consensus 71 ~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG~ 150 (639)
+.|..||||||||||+|..+ ...+.||||+|+|+.+|++...+.+..++++++|+||++++++|||||||.
T Consensus 57 ~~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~ 127 (274)
T 1r0r_E 57 NTDGNGHGTHVAGTVAALDN---------TTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLGG 127 (274)
T ss_dssp TCCSSSHHHHHHHHHHCCSS---------SSBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEB
T ss_pred CCCCCCCHHHHHHHHHccCC---------CCceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEeCCCC
Confidence 56789999999999999731 224689999999999999987667788999999999999999999999998
Q ss_pred CCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCC----CcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEe
Q 006581 151 SLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYP----QTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAF 226 (639)
Q Consensus 151 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~ 226 (639)
.. ....+..+++++.++|++||+||||+|... ...+...+++|+|||++.+
T Consensus 128 ~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~-------------------- 182 (274)
T 1r0r_E 128 AS-----GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN-------------------- 182 (274)
T ss_dssp SS-----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT--------------------
T ss_pred CC-----CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC--------------------
Confidence 74 346788889999999999999999999752 3345566889999975321
Q ss_pred ecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCC
Q 006581 227 YNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPT 306 (639)
Q Consensus 227 ~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~ 306 (639)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEe
Q 006581 307 KDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILA 386 (639)
Q Consensus 307 ~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~s 386 (639)
+.++.||++||.+ ||+|||++|++
T Consensus 183 ------------------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s 206 (274)
T 1r0r_E 183 ------------------------------------------------SNRASFSSVGAEL--------EVMAPGAGVYS 206 (274)
T ss_dssp ------------------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEE
T ss_pred ------------------------------------------------CCcCccCCCCCCc--------eEEeCCCCeEe
Confidence 3678899999855 99999999999
Q ss_pred ccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCC
Q 006581 387 SWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAP 466 (639)
Q Consensus 387 a~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~ 466 (639)
+++ .+.|..++|||||||||||++|||+|++|+|++.+||++|++||+++.
T Consensus 207 ~~~-----------------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------------ 257 (274)
T 1r0r_E 207 TYP-----------------TNTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG------------ 257 (274)
T ss_dssp EET-----------------TTEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS------------
T ss_pred ecC-----------------CCCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC------------
Confidence 987 578999999999999999999999999999999999999999999652
Q ss_pred CCCCCCCCCCCCCCCcCCcCC
Q 006581 467 HKQADPFDYGGGHVDPNKAMD 487 (639)
Q Consensus 467 ~~~~~~~~~G~G~id~~~A~~ 487 (639)
++..||+|+||+.+|++
T Consensus 258 ----~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 ----SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp ----CHHHHTTCBCCHHHHTC
T ss_pred ----CCCCcccCccCHHHHhC
Confidence 24579999999999985
No 9
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.3e-48 Score=397.55 Aligned_cols=215 Identities=32% Similarity=0.412 Sum_probs=188.4
Q ss_pred CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccC
Q 006581 70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLG 149 (639)
Q Consensus 70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG 149 (639)
++.|..||||||||||+|..+ ...+.||||+|+|+.+|++...+.+..+++++||+||++++++|||||||
T Consensus 55 ~~~d~~gHGT~vAgiia~~~~---------~~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S~G 125 (269)
T 1gci_A 55 STQDGNGHGTHVAGTIAALNN---------SIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLG 125 (269)
T ss_dssp SCSCSSSHHHHHHHHHHCCCS---------SSBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCCCCCCChHHHHHHHhcCcC---------CCCcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 356889999999999999731 22458999999999999998767788899999999999999999999999
Q ss_pred CCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecC
Q 006581 150 SSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNG 229 (639)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~ 229 (639)
... ....+..+++++.++|++||+||||+|......+...+++|+|||++.+
T Consensus 126 ~~~-----~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~----------------------- 177 (269)
T 1gci_A 126 SPS-----PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN----------------------- 177 (269)
T ss_dssp BSS-----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT-----------------------
T ss_pred CCC-----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC-----------------------
Confidence 873 2457888889999999999999999998777777778999999975422
Q ss_pred cCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCC
Q 006581 230 KEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDV 309 (639)
Q Consensus 230 ~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~ 309 (639)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccC
Q 006581 310 HFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWS 389 (639)
Q Consensus 310 ~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~ 389 (639)
+.++.||++||.+ ||+|||++|+++++
T Consensus 178 ---------------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~ 204 (269)
T 1gci_A 178 ---------------------------------------------NNRASFSQYGAGL--------DIVAPGVNVQSTYP 204 (269)
T ss_dssp ---------------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEET
T ss_pred ---------------------------------------------CCCCCCCCCCCCc--------ceEecCCCeEeecC
Confidence 3678999999976 99999999999987
Q ss_pred CCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCC
Q 006581 390 PVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQ 469 (639)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~ 469 (639)
++.|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 205 -----------------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g--------------- 252 (269)
T 1gci_A 205 -----------------GSTYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--------------- 252 (269)
T ss_dssp -----------------TTEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---------------
T ss_pred -----------------CCCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC---------------
Confidence 578999999999999999999999999999999999999999999652
Q ss_pred CCCCCCCCCCCCcCCcCC
Q 006581 470 ADPFDYGGGHVDPNKAMD 487 (639)
Q Consensus 470 ~~~~~~G~G~id~~~A~~ 487 (639)
++..||+|+||+.+|++
T Consensus 253 -~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 -STNLYGSGLVNAEAATR 269 (269)
T ss_dssp -CHHHHTTCBCCHHHHTC
T ss_pred -CCCCcccCccCHHHHcC
Confidence 24479999999999985
No 10
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1.9e-48 Score=398.91 Aligned_cols=242 Identities=29% Similarity=0.372 Sum_probs=205.4
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.+ +++.+++|.++ ..++.|..|||||
T Consensus 37 iDtGvd~~h~~l~~---------------------------~~~~~~~~~~~---------------~~~~~d~~gHGT~ 74 (279)
T 1thm_A 37 VDTGVQSNHPDLAG---------------------------KVVGGWDFVDN---------------DSTPQNGNGHGTH 74 (279)
T ss_dssp EESCCCTTCTTTTT---------------------------TEEEEEETTTT---------------BSCCCCSSSHHHH
T ss_pred EccCCCCCCcchhc---------------------------CccccccccCC---------------CCCCCCCCCcHHH
Confidence 79999999999954 24455666543 1246788999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccCCCCCCCCCccc
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLGSSLPLSTYVDD 160 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~ 160 (639)
|||||+|...++ ..+.||||+|+|+.+|++...+.+..+++++||+||+++|++|||||||... ..+
T Consensus 75 vAgiia~~~~n~--------~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~-----~~~ 141 (279)
T 1thm_A 75 CAGIAAAVTNNS--------TGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGGTV-----GNS 141 (279)
T ss_dssp HHHHHHCCCSSS--------SSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECCCBSS-----CCH
T ss_pred HHHHHhCccCCC--------CccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEecCCCC-----CCH
Confidence 999999986432 2458999999999999998767788899999999999999999999999873 346
Q ss_pred hHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCceeeeE
Q 006581 161 IISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKFYPIV 240 (639)
Q Consensus 161 ~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~pl~ 240 (639)
.+..+++++.++|++||+||||+|......+...+++|+|||++.+
T Consensus 142 ~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------------------------- 187 (279)
T 1thm_A 142 GLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN---------------------------------- 187 (279)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT----------------------------------
T ss_pred HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC----------------------------------
Confidence 7888889999999999999999998777777778999999975422
Q ss_pred EccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccEEEE
Q 006581 241 IGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPYIQV 320 (639)
Q Consensus 241 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~~~i 320 (639)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCccCCCC
Q 006581 321 DFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQTDHV 400 (639)
Q Consensus 321 ~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~ 400 (639)
+.++.||++||.+ ||+|||++|+++++
T Consensus 188 ----------------------------------~~~~~fS~~G~~~--------dv~APG~~i~s~~~----------- 214 (279)
T 1thm_A 188 ----------------------------------DNKSSFSTYGSWV--------DVAAPGSSIYSTYP----------- 214 (279)
T ss_dssp ----------------------------------SCBCTTCCCCTTC--------CEEEECSSEEEEET-----------
T ss_pred ----------------------------------CCcCCcCCCCCce--------EEEEcCCCeEEEeC-----------
Confidence 3678999999866 99999999999987
Q ss_pred CCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCCCCCCCCCCC
Q 006581 401 TPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQADPFDYGGGHV 480 (639)
Q Consensus 401 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G~i 480 (639)
.+.|..++|||||||||||++||| ++|.+++++||++|++||+++...+ ..||+|+|
T Consensus 215 ------~~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~---------------~~~G~G~v 271 (279)
T 1thm_A 215 ------TSTYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG---------------TYWAKGRV 271 (279)
T ss_dssp ------TTEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT---------------TTBSSEEC
T ss_pred ------CCCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC---------------ccccCCee
Confidence 578999999999999999999999 5799999999999999999763221 36899999
Q ss_pred CcCCcCC
Q 006581 481 DPNKAMD 487 (639)
Q Consensus 481 d~~~A~~ 487 (639)
|+.+|++
T Consensus 272 n~~~A~~ 278 (279)
T 1thm_A 272 NAYKAVQ 278 (279)
T ss_dssp CHHHHHH
T ss_pred CHHHHhc
Confidence 9999875
No 11
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=1.9e-48 Score=399.08 Aligned_cols=214 Identities=32% Similarity=0.429 Sum_probs=185.2
Q ss_pred CCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccCCC
Q 006581 72 RDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLGSS 151 (639)
Q Consensus 72 ~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG~~ 151 (639)
.|..||||||||||+|... ...+.||||+|+|+.+|++...+.+..++++++|+|+++++++|||||||..
T Consensus 59 ~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~ 129 (281)
T 1to2_E 59 QDNNSHGTHVAGTVAALNN---------SIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGP 129 (281)
T ss_dssp CCSSSHHHHHHHHHHCCSS---------SSSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBS
T ss_pred CCCCCcHHHHHHHHhccCC---------CCcceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEECCcCC
Confidence 5789999999999999731 2246899999999999999876677889999999999999999999999987
Q ss_pred CCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCC----CcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEee
Q 006581 152 LPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYP----QTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFY 227 (639)
Q Consensus 152 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~ 227 (639)
. ....+..+++++.++|++||+||||+|... ...+...|++|+|||++..
T Consensus 130 ~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~--------------------- 183 (281)
T 1to2_E 130 S-----GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS--------------------- 183 (281)
T ss_dssp C-----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT---------------------
T ss_pred C-----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC---------------------
Confidence 4 346788889999999999999999999752 3345566889999975321
Q ss_pred cCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCC
Q 006581 228 NGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTK 307 (639)
Q Consensus 228 ~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~ 307 (639)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEec
Q 006581 308 DVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILAS 387 (639)
Q Consensus 308 ~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa 387 (639)
+.++.||++||.+ ||+|||++|+++
T Consensus 184 -----------------------------------------------~~~~~fS~~G~~~--------di~APG~~i~s~ 208 (281)
T 1to2_E 184 -----------------------------------------------NQRASFSSVGPEL--------DVMAPGVSIQST 208 (281)
T ss_dssp -----------------------------------------------SCBCTTCCCSTTC--------CEEEECSSEEEE
T ss_pred -----------------------------------------------CCcCCcCCCCCCc--------eEEecCCCeEee
Confidence 3678999999965 999999999999
Q ss_pred cCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCC
Q 006581 388 WSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPH 467 (639)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~ 467 (639)
++ ++.|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 209 ~~-----------------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------------- 258 (281)
T 1to2_E 209 LP-----------------GNKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG------------- 258 (281)
T ss_dssp ET-----------------TTEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS-------------
T ss_pred cC-----------------CCCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC-------------
Confidence 87 578999999999999999999999999999999999999999999652
Q ss_pred CCCCCCCCCCCCCCcCCcCCC
Q 006581 468 KQADPFDYGGGHVDPNKAMDP 488 (639)
Q Consensus 468 ~~~~~~~~G~G~id~~~A~~~ 488 (639)
+++.||+|+||+.+|++.
T Consensus 259 ---~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 ---DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp ---CHHHHTTCBCCHHHHTSS
T ss_pred ---CCCCcccceecHHHHhhh
Confidence 345799999999999985
No 12
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=2.1e-49 Score=407.14 Aligned_cols=223 Identities=24% Similarity=0.221 Sum_probs=185.7
Q ss_pred CCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCC-CCCCHHHHHHHHHHHHhCCCcEEEEccCCC
Q 006581 73 DAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAP-GGCSSADLLAAFDDATFDGVDVISLSLGSS 151 (639)
Q Consensus 73 D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~-~~~~~~~i~~ai~~a~~~g~dVIn~SlG~~ 151 (639)
|.+||||||||||+|+.. ..+.||||+|+|+.+|++.+. +.....+++++|+||++++++|||||||..
T Consensus 47 ~~~gHGT~VAGiiag~~~----------~~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~ 116 (282)
T 3zxy_A 47 FMSAHGTHVASIIFGQPE----------TSVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGEL 116 (282)
T ss_dssp HHHHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEE
T ss_pred CCCCcccceeehhhccCC----------ceeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccc
Confidence 467999999999999742 235899999999999998654 466788899999999999999999999976
Q ss_pred CCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcC
Q 006581 152 LPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKE 231 (639)
Q Consensus 152 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (639)
. .....+..+..++.++.++|+++|+||||+|......+...+++|+|||++.+
T Consensus 117 ~-~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------- 170 (282)
T 3zxy_A 117 T-DFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH------------------------- 170 (282)
T ss_dssp E-SSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT-------------------------
T ss_pred c-ccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC-------------------------
Confidence 4 22234566788889999999999999999998877777888999999975422
Q ss_pred CCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCc
Q 006581 232 DLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHF 311 (639)
Q Consensus 232 ~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~ 311 (639)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCC
Q 006581 312 SFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPV 391 (639)
Q Consensus 312 ~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~ 391 (639)
+.++.||+||+.. .||||+|||++|+++++
T Consensus 171 -------------------------------------------~~~~~~S~~~~~~-----~~~di~ApG~~i~s~~~-- 200 (282)
T 3zxy_A 171 -------------------------------------------GHPLDFSNWGSTY-----EQQGILAPGEDILGAKP-- 200 (282)
T ss_dssp -------------------------------------------SCBCSSSCCCHHH-----HHHEEEEECSSEEEECT--
T ss_pred -------------------------------------------CccccccCCCCCc-----cccceeccCcceeeecC--
Confidence 4677899998653 68899999999999987
Q ss_pred CCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhC----CCCCHHHHHHHHHhcCccCCcCCccccccCCCC
Q 006581 392 SNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIH----PTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPH 467 (639)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~ 467 (639)
++.|..++|||||||||||++|||+|++ |.++++|||++|++||++++. .
T Consensus 201 ---------------~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~-----------~ 254 (282)
T 3zxy_A 201 ---------------GGGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD-----------D 254 (282)
T ss_dssp ---------------TSCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC--------------
T ss_pred ---------------CCceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC-----------C
Confidence 5789999999999999999999999875 789999999999999996532 2
Q ss_pred CCCCCCCCCCCCCCcCCcCC
Q 006581 468 KQADPFDYGGGHVDPNKAMD 487 (639)
Q Consensus 468 ~~~~~~~~G~G~id~~~A~~ 487 (639)
.+.....+|+|+||+.+|++
T Consensus 255 ~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 255 APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp ----CGGGTTCBCCHHHHHH
T ss_pred CCCccCceeeeEeCHHHHHH
Confidence 23345579999999999986
No 13
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=4.3e-48 Score=404.74 Aligned_cols=247 Identities=27% Similarity=0.333 Sum_probs=200.9
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.+ +++.+++|..++.. +..++.|..|||||
T Consensus 48 iDtGid~~Hp~l~~---------------------------~~~~~~~~~~~~~~-----------~~~~~~d~~gHGT~ 89 (327)
T 2x8j_A 48 IDTGCQVDHPDLAE---------------------------RIIGGVNLTTDYGG-----------DETNFSDNNGHGTH 89 (327)
T ss_dssp EESCCCTTCTTTGG---------------------------GEEEEEECSSGGGG-----------CTTCCCCSSSHHHH
T ss_pred EcCCCCCCChhHhh---------------------------cccCCccccCCCCC-----------CCCCCCCCCCchHH
Confidence 79999999999954 34556677655321 11245688999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHh------CCCcEEEEccCCCCCC
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATF------DGVDVISLSLGSSLPL 154 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~------~g~dVIn~SlG~~~~~ 154 (639)
|||||+|... +..+.||||+|+|+.+|++...+.+..+++++||+||++ .+++|||||||...
T Consensus 90 VAgiia~~~~---------~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~Vin~S~G~~~-- 158 (327)
T 2x8j_A 90 VAGTVAAAET---------GSGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRIITMSLGGPT-- 158 (327)
T ss_dssp HHHHHHCCCC---------SSBCCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCCSEEEECEEBSC--
T ss_pred HHHHHhccCC---------CCCcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCceEEEECCCcCC--
Confidence 9999999841 224689999999999999987667788999999999999 89999999999873
Q ss_pred CCCccchHHHHHHHhHhCCcEEEEeccCCCCCC-----CcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecC
Q 006581 155 STYVDDIISIGSFHAVAKGISVVCSAGNSGPYP-----QTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNG 229 (639)
Q Consensus 155 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~ 229 (639)
....+..+++++.++|++||+||||+|... ...+...+++|+|||++.+
T Consensus 159 ---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~----------------------- 212 (327)
T 2x8j_A 159 ---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD----------------------- 212 (327)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT-----------------------
T ss_pred ---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC-----------------------
Confidence 346688888999999999999999999652 3445567899999975422
Q ss_pred cCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCC
Q 006581 230 KEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDV 309 (639)
Q Consensus 230 ~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~ 309 (639)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccC
Q 006581 310 HFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWS 389 (639)
Q Consensus 310 ~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~ 389 (639)
+.++.||++||.+ ||+|||++|+++++
T Consensus 213 ---------------------------------------------~~~~~fS~~G~~~--------di~APG~~i~s~~~ 239 (327)
T 2x8j_A 213 ---------------------------------------------LRLSDFTNTNEEI--------DIVAPGVGIKSTYL 239 (327)
T ss_dssp ---------------------------------------------CCBSCC---CCCC--------SEEEECSSEEEECS
T ss_pred ---------------------------------------------CCCCCccCCCCCc--------eEecCcCceEeecC
Confidence 4678999999855 99999999999987
Q ss_pred CCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhh-----CCCCCHHHHHHHHHhcCccCCcCCccccccC
Q 006581 390 PVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAI-----HPTWSPAAIKSAIVTTASLKDEYAQSIVAEG 464 (639)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~ 464 (639)
++.|..++|||||||||||++|||+|+ +|.|++.+||++|++||+++.
T Consensus 240 -----------------~~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g---------- 292 (327)
T 2x8j_A 240 -----------------DSGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIG---------- 292 (327)
T ss_dssp -----------------TTCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCS----------
T ss_pred -----------------CCCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCC----------
Confidence 578999999999999999999999999 999999999999999999652
Q ss_pred CCCCCCCCCCCCCCCCCcCCcCC
Q 006581 465 APHKQADPFDYGGGHVDPNKAMD 487 (639)
Q Consensus 465 ~~~~~~~~~~~G~G~id~~~A~~ 487 (639)
++...||+|+||+.+|++
T Consensus 293 -----~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 293 -----FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp -----SCHHHHTTCEECTTHHHH
T ss_pred -----CCCCceeeeEECHHHHHH
Confidence 235579999999999987
No 14
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=2.1e-47 Score=445.55 Aligned_cols=353 Identities=26% Similarity=0.258 Sum_probs=243.4
Q ss_pred CCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCC--CCHHHHHHHHHHHHh-----CCCcEE
Q 006581 72 RDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGG--CSSADLLAAFDDATF-----DGVDVI 144 (639)
Q Consensus 72 ~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~--~~~~~i~~ai~~a~~-----~g~dVI 144 (639)
.|++||||||||||||.. + +..+.||||+|+|+.+|+++.... .....++++|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N--------~~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-S--------SRDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-S--------SSSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-C--------CCCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478999999999999985 2 234689999999999999976422 256778888888887 799999
Q ss_pred EEccCCCCCCCCCccchHHHHHHHhH-hCCcEEEEeccCCCCCCCcc--cC--CCCcEEEEEeeccCCccceEEEeCCce
Q 006581 145 SLSLGSSLPLSTYVDDIISIGSFHAV-AKGISVVCSAGNSGPYPQTV--IN--TAPWVITVAASTIDRAFPTAITMGNNQ 219 (639)
Q Consensus 145 n~SlG~~~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~~~--~~--~ap~vitVgA~~~~~~~~~~~~~~~~~ 219 (639)
|||||.... ....+.+..++.++. ++|++||+||||+|+...++ +. .++++|+|||++...........
T Consensus 338 NmS~G~~~~--~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~---- 411 (1354)
T 3lxu_X 338 NMSYGEHAN--WSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM---- 411 (1354)
T ss_dssp EECCCCCCS--CSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC--------
T ss_pred EcCCccCCC--CCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc----
Confidence 999999851 133467778888886 89999999999999865544 33 36999999997644211000000
Q ss_pred EEEeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEE
Q 006581 220 TVVGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGL 299 (639)
Q Consensus 220 ~~~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~ 299 (639)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEc
Q 006581 300 IFAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAA 379 (639)
Q Consensus 300 i~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~A 379 (639)
.....+.++.|||+||+. ++++||||+|
T Consensus 412 --------------------------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaA 439 (1354)
T 3lxu_X 412 --------------------------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCA 439 (1354)
T ss_dssp --------------------------------------------------------CCCCCCCCSCCS--SSSCCEEEEE
T ss_pred --------------------------------------------------ccCCCCccccccCCCCCc--cCCCcceEEe
Confidence 001125789999999998 8999999999
Q ss_pred CCCcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHHhcCccCCc
Q 006581 380 PGVNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKA----IHPTWSPAAIKSAIVTTASLKDE 455 (639)
Q Consensus 380 PG~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~ls~~~vk~~L~~TA~~~~~ 455 (639)
||++|+++.... .+.|..++|||||||||||++|||++ .+|+|++.+||++|++||+++.
T Consensus 440 PG~~I~St~~~~---------------~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~- 503 (1354)
T 3lxu_X 440 PGGAIASVPQFT---------------MSKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLG- 503 (1354)
T ss_dssp EC------------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCT-
T ss_pred cCceEEEeecCC---------------CCceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCC-
Confidence 999999876532 47899999999999999999999986 7999999999999999999652
Q ss_pred CCccccccCCCCCCCCCCCCCCCCCCcCCcCCCCeeeeCcccchhhhhhcCCCCcc-ceeecccCcccccCCCccccccC
Q 006581 456 YAQSIVAEGAPHKQADPFDYGGGHVDPNKAMDPGLVYDMEVSDYVRFLCAMGYNNS-AISLMNRASTTCNDKSTKFLVNL 534 (639)
Q Consensus 456 ~g~p~~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 534 (639)
..+++.||+|+||+.+|++..+.++..+.+++.|+|..+.... .|-+ +.
T Consensus 504 -------------~~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIyl--R~--------------- 553 (1354)
T 3lxu_X 504 -------------YVDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIHL--RQ--------------- 553 (1354)
T ss_dssp -------------TSCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEEE--CS---------------
T ss_pred -------------CCCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceEE--ec---------------
Confidence 1345689999999999999988999999999999999874322 1111 10
Q ss_pred CcCeEEecccCccEEEEEEEE----EcC---C-CCeeEE--EEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEeecC
Q 006581 535 NLPSITIPELKKSITVSRQVT----NVS---P-MNSVYT--ARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRV 604 (639)
Q Consensus 535 n~ps~~~~~~~~~~~~~~tvt----n~~---~-~~~ty~--~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~ 604 (639)
+ ......+++++|+ |.. . ....|. +.+...+ --|++ |..|.+ .++.++|.|.++....
T Consensus 554 --~-----~~~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~~-p~~l~l--~~~~r~~~v~vDp~~L- 621 (1354)
T 3lxu_X 554 --G-----VQRNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQC-GAFLDL--SYGTRSIAVRVDPTGL- 621 (1354)
T ss_dssp --S-----CCCSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEEE-CSCEEC--TTSCEEEEEEECGGGC-
T ss_pred --c-----ccCCceEEEEEEeeeecCcccCChhhccceEEEEEEecCC-Cceec-ccceee--cCCCceEEEEECCCCC-
Confidence 0 0112333333332 211 1 111122 2222111 12332 666766 4778899999986544
Q ss_pred CCceEEEEEEEEc-----CceEEEEeEEEE
Q 006581 605 QGRYSFGNLFWED-----GIHVVRIPLIVR 629 (639)
Q Consensus 605 ~~~~~~G~i~~~~-----~~~~v~~P~~~~ 629 (639)
..+..++.|...| ..+..|+|+-|-
T Consensus 622 ~~G~h~~~v~~~D~~~~~~gp~f~ipvTv~ 651 (1354)
T 3lxu_X 622 QPGVHSAVIRAYDTDCVQKGSLFEIPVTVV 651 (1354)
T ss_dssp CSEEEEEEEEEEESSCTTSCCSEEEEEEEE
T ss_pred CCcceeEEEEEEEcCCcccCceEEeeEEEE
Confidence 5567899998877 258899999765
No 15
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=2.3e-48 Score=417.74 Aligned_cols=248 Identities=29% Similarity=0.364 Sum_probs=205.4
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.++ +..+++|..+... .+..++.|..|||||
T Consensus 111 iDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~~----------~~~~~~~d~~gHGT~ 153 (395)
T 2z2z_A 111 LDTGVDYDHPDLAAN---------------------------IAWCVSTLRGKVS----------TKLRDCADQNGHGTH 153 (395)
T ss_dssp EESCBCTTCTTTGGG---------------------------EEEEEECGGGCCB----------CCHHHHBCSSSHHHH
T ss_pred EcCCCCCCChhHhhc---------------------------cccCccccCCccc----------CCCCCCCCCCCCHHH
Confidence 799999999999653 3344555433110 001124678999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhC--------------------C
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFD--------------------G 140 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~--------------------g 140 (639)
|||||+|.. + ...+.||||+|+|+.+|+++..+.+..+++++||+||+++ +
T Consensus 154 vAgiia~~~-n--------~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~ 224 (395)
T 2z2z_A 154 VIGTIAALN-N--------DIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDA 224 (395)
T ss_dssp HHHHHHCCC-S--------SSSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCC
T ss_pred HHHHHHeec-C--------CCceEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCC
Confidence 999999973 1 2245899999999999999876667889999999999988 9
Q ss_pred CcEEEEccCCCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceE
Q 006581 141 VDVISLSLGSSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQT 220 (639)
Q Consensus 141 ~dVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~ 220 (639)
++|||||||... ....+..++.++.++|++||+||||+|......+...+++|+|||++.+
T Consensus 225 ~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------- 285 (395)
T 2z2z_A 225 AEVISMSLGGPA-----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN-------------- 285 (395)
T ss_dssp CSEEEECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT--------------
T ss_pred CeEEEecCCCCC-----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecCC--------------
Confidence 999999999873 2456788889999999999999999998777777788999999985422
Q ss_pred EEeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEE
Q 006581 221 VVGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLI 300 (639)
Q Consensus 221 ~~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i 300 (639)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcC
Q 006581 301 FAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAP 380 (639)
Q Consensus 301 ~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~AP 380 (639)
+.++.||++|| +|+||
T Consensus 286 ------------------------------------------------------~~~a~fS~~G~----------~v~AP 301 (395)
T 2z2z_A 286 ------------------------------------------------------DNIASFSNRQP----------EVSAP 301 (395)
T ss_dssp ------------------------------------------------------SCBCTTSCSSC----------SEEEE
T ss_pred ------------------------------------------------------CCCCcccCCCC----------CEEeC
Confidence 47789999997 67999
Q ss_pred CCcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCC-------------CCCHHHHHHHHH
Q 006581 381 GVNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHP-------------TWSPAAIKSAIV 447 (639)
Q Consensus 381 G~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-------------~ls~~~vk~~L~ 447 (639)
|++|+|+++ ++.|..++|||||||||||++|||+|++| .|++.+||++|+
T Consensus 302 G~~i~s~~~-----------------~~~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~ 364 (395)
T 2z2z_A 302 GVDILSTYP-----------------DDSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILH 364 (395)
T ss_dssp CSSEEEEET-----------------TTEEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHH
T ss_pred CCCeeeecC-----------------CCceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHH
Confidence 999999997 57899999999999999999999999999 999999999999
Q ss_pred hcCccCCcCCccccccCCCCCCCCCCCCCCCCCCcCCcCC
Q 006581 448 TTASLKDEYAQSIVAEGAPHKQADPFDYGGGHVDPNKAMD 487 (639)
Q Consensus 448 ~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G~id~~~A~~ 487 (639)
+||+++... ..+..||+|+||+.+|++
T Consensus 365 ~tA~~~~~~-------------g~~~~~G~G~vd~~~A~~ 391 (395)
T 2z2z_A 365 ITADDLGPT-------------GWDADYGYGVVRAALAVQ 391 (395)
T ss_dssp HHSBCCSSS-------------SSBTTTBTCBCCHHHHHH
T ss_pred hhccccCCC-------------CCCCCccCceeCHHHHHH
Confidence 999975321 234689999999999986
No 16
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=7.8e-47 Score=393.50 Aligned_cols=264 Identities=30% Similarity=0.326 Sum_probs=209.3
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.+. +..+++|..... .......|..|||||
T Consensus 33 iDtGvd~~H~~l~~~---------------------------~~~~~~~~~~~~-----------~~~~~~~d~~gHGT~ 74 (310)
T 2ixt_A 33 LDTGVNTSHPDLVNN---------------------------VEQCKDFTGATT-----------PINNSCTDRNGHGTH 74 (310)
T ss_dssp EESCCCTTCTTTTTT---------------------------EEEEEESSSSSS-----------CEETCCCCSSSHHHH
T ss_pred EecCCCCCCHHHhhc---------------------------ccccccccCCCC-----------CCCCCCCCCCCCHHH
Confidence 799999999999553 334456654311 111245678999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCC-----cEEEEccCCCCCCC
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGV-----DVISLSLGSSLPLS 155 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~-----dVIn~SlG~~~~~~ 155 (639)
|||||+|.... +...+.||||+|+|+.+|++...+.+..+++++||+|++++++ +|||||||...
T Consensus 75 vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~Vin~S~G~~~--- 144 (310)
T 2ixt_A 75 VAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTIISMSLGSSA--- 144 (310)
T ss_dssp HHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEEEECCCBSS---
T ss_pred HHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCCeEEEEcCCCCC---
Confidence 99999998521 2234689999999999999987677889999999999999888 99999999873
Q ss_pred CCccchHHHHHHHhHhCCcEEEEeccCCCCCC--CcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCC
Q 006581 156 TYVDDIISIGSFHAVAKGISVVCSAGNSGPYP--QTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDL 233 (639)
Q Consensus 156 ~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~--~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 233 (639)
....+..+++++.++|++||+||||+|... ...+...+++|+|||+....
T Consensus 145 --~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~-------------------------- 196 (310)
T 2ixt_A 145 --NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ-------------------------- 196 (310)
T ss_dssp --CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE--------------------------
T ss_pred --CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc--------------------------
Confidence 346778888999999999999999999763 34455679999999854210
Q ss_pred CceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccc
Q 006581 234 NKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSF 313 (639)
Q Consensus 234 ~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~ 313 (639)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCC--eeecccCCCCCCCC----CCCcCCceEcCCCcEEec
Q 006581 314 GVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISP--EVAFFSSRGPSSLS----PSVLKPDIAAPGVNILAS 387 (639)
Q Consensus 314 ~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSS~Gp~~~~----~~~~KPDI~APG~~I~sa 387 (639)
..+ .++.||++||.... ..+.||||+|||++|+++
T Consensus 197 ---------------------------------------~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s~ 237 (310)
T 2ixt_A 197 ---------------------------------------QNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYST 237 (310)
T ss_dssp ---------------------------------------ETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEEE
T ss_pred ---------------------------------------cCCCeeeccccCCCCccCCccccccCCCeeEECCCCCEeee
Confidence 002 67789999995421 123599999999999999
Q ss_pred cCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCC
Q 006581 388 WSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPH 467 (639)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~ 467 (639)
++ ++.|..++|||||||||||++|||+|++|+|++.+||++|++||++++..+. ...
T Consensus 238 ~~-----------------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~------~~a 294 (310)
T 2ixt_A 238 WY-----------------NGGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG------YGA 294 (310)
T ss_dssp CT-----------------TSSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS------TTC
T ss_pred cC-----------------CCCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC------ccc
Confidence 87 5789999999999999999999999999999999999999999998754321 123
Q ss_pred CCCCCCCCCCCCCCc
Q 006581 468 KQADPFDYGGGHVDP 482 (639)
Q Consensus 468 ~~~~~~~~G~G~id~ 482 (639)
.......+|+|++|+
T Consensus 295 ~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 295 AIGDDYASGFGFARV 309 (310)
T ss_dssp CSSSBTTTBTCBCCC
T ss_pred ccCCccccccceeec
Confidence 455667899999996
No 17
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1.1e-47 Score=401.02 Aligned_cols=248 Identities=29% Similarity=0.369 Sum_probs=204.0
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|+++ +..+++|..+... .+..+..|..|||||
T Consensus 36 iDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~~----------~~~~~~~d~~gHGT~ 78 (320)
T 2z30_A 36 LDTGVDYDHPDLAAN---------------------------IAWCVSTLRGKVS----------TKLRDCADQNGHGTH 78 (320)
T ss_dssp EESCBCTTCTTTGGG---------------------------EEEEEECGGGCCB----------CCHHHHBCSSSHHHH
T ss_pred ECCCCCCCChhHhcc---------------------------cccCccccCCccC----------CCCCCCCCCCCCHHH
Confidence 799999999999552 3344555443110 001123578999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhC--------------------C
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFD--------------------G 140 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~--------------------g 140 (639)
|||||+|.. +...+.||||+|+|+.+|++...+.+..++++++|+||+++ +
T Consensus 79 vAgiia~~~---------n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~ 149 (320)
T 2z30_A 79 VIGTIAALN---------NDIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDA 149 (320)
T ss_dssp HHHHHHCCS---------SSBSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSCTTSSSCCTTCTTSCC
T ss_pred HHHHHHccc---------CCCceEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCcccccccccccccccccccCC
Confidence 999999973 12245899999999999999876677889999999999987 9
Q ss_pred CcEEEEccCCCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceE
Q 006581 141 VDVISLSLGSSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQT 220 (639)
Q Consensus 141 ~dVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~ 220 (639)
++|||||||... ....+..++.++.++|++||+||||+|......+...|++|+|||++.+
T Consensus 150 ~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------- 210 (320)
T 2z30_A 150 AEVISMSLGGPA-----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN-------------- 210 (320)
T ss_dssp CSEEEECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT--------------
T ss_pred ceEEEecCCCCC-----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCCC--------------
Confidence 999999999874 2456788888999999999999999998777777788999999985422
Q ss_pred EEeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEE
Q 006581 221 VVGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLI 300 (639)
Q Consensus 221 ~~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i 300 (639)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcC
Q 006581 301 FAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAP 380 (639)
Q Consensus 301 ~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~AP 380 (639)
+.++.||++|| +|+||
T Consensus 211 ------------------------------------------------------~~~~~~S~~g~----------~v~AP 226 (320)
T 2z30_A 211 ------------------------------------------------------DNIASFSNRQP----------EVSAP 226 (320)
T ss_dssp ------------------------------------------------------SCBCTTSCSSC----------SEEEE
T ss_pred ------------------------------------------------------CCcCcccCCCC----------CEEeC
Confidence 36788999987 78999
Q ss_pred CCcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhC-------------CCCCHHHHHHHHH
Q 006581 381 GVNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIH-------------PTWSPAAIKSAIV 447 (639)
Q Consensus 381 G~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-------------p~ls~~~vk~~L~ 447 (639)
|++|+++++ .+.|..++|||||||||||++|||+|++ |+|++.+||++|+
T Consensus 227 G~~i~s~~~-----------------~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~ 289 (320)
T 2z30_A 227 GVDILSTYP-----------------DDSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILH 289 (320)
T ss_dssp CSSEEEEET-----------------TTEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHH
T ss_pred CCCeEEecc-----------------CCCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHH
Confidence 999999987 5789999999999999999999999998 9999999999999
Q ss_pred hcCccCCcCCccccccCCCCCCCCCCCCCCCCCCcCCcCC
Q 006581 448 TTASLKDEYAQSIVAEGAPHKQADPFDYGGGHVDPNKAMD 487 (639)
Q Consensus 448 ~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G~id~~~A~~ 487 (639)
+||+++.. +.....||+|+||+.+|++
T Consensus 290 ~ta~~~~~-------------~g~~~~~G~G~vd~~~A~~ 316 (320)
T 2z30_A 290 ITADDLGP-------------TGWDADYGYGVVRAALAVQ 316 (320)
T ss_dssp HHSBCCSS-------------SSSBTTTBTCBCCHHHHHH
T ss_pred hhCccCCC-------------CCCCCCcCCceeCHHHHHH
Confidence 99997532 1234579999999999986
No 18
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=9.5e-48 Score=399.86 Aligned_cols=225 Identities=24% Similarity=0.244 Sum_probs=188.3
Q ss_pred CCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCC-CCCCHHHHHHHHHHHHhCCCcEEEEccC
Q 006581 71 PRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAP-GGCSSADLLAAFDDATFDGVDVISLSLG 149 (639)
Q Consensus 71 ~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~-~~~~~~~i~~ai~~a~~~g~dVIn~SlG 149 (639)
..|..||||||||||+|+.. ..+.||||+|+|+.+|++.+. +......+++||+||++++++|||+|||
T Consensus 58 ~~d~~gHGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g 127 (306)
T 4h6w_A 58 NGSMSTHGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAG 127 (306)
T ss_dssp -CCCCHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCCCCCchHHHHHHHHcccc----------CCcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeecccc
Confidence 34678999999999999742 245899999999999998653 5677888999999999999999999999
Q ss_pred CCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecC
Q 006581 150 SSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNG 229 (639)
Q Consensus 150 ~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~ 229 (639)
... ........+..+++++.++|++||+||||+|......+...+++|+|||++..
T Consensus 128 ~~~-~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~----------------------- 183 (306)
T 4h6w_A 128 QLT-DAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ----------------------- 183 (306)
T ss_dssp EEE-SSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT-----------------------
T ss_pred ccc-cCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC-----------------------
Confidence 764 22244566888899999999999999999998777777778999999975422
Q ss_pred cCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCC
Q 006581 230 KEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDV 309 (639)
Q Consensus 230 ~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~ 309 (639)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccC
Q 006581 310 HFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWS 389 (639)
Q Consensus 310 ~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~ 389 (639)
+.++.||++|+.. .||||+|||++|+++++
T Consensus 184 ---------------------------------------------~~~~~~s~~g~~~-----~~~di~APG~~i~s~~~ 213 (306)
T 4h6w_A 184 ---------------------------------------------GKPVDFSNWGDAY-----QKQGILAPGKDILGAKP 213 (306)
T ss_dssp ---------------------------------------------SCBCSSSCBCHHH-----HHHEEEEECSSEEEECT
T ss_pred ---------------------------------------------CCccccccccCCc-----CcceeecCCcCcccccC
Confidence 3667889998643 68899999999999987
Q ss_pred CCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhh----CCCCCHHHHHHHHHhcCccCCcCCccccccCC
Q 006581 390 PVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAI----HPTWSPAAIKSAIVTTASLKDEYAQSIVAEGA 465 (639)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~ 465 (639)
++.|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+
T Consensus 214 -----------------~~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~-------- 268 (306)
T 4h6w_A 214 -----------------NGGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD-------- 268 (306)
T ss_dssp -----------------TSCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT--------
T ss_pred -----------------CCceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC--------
Confidence 578999999999999999999999864 699999999999999999764222
Q ss_pred CCCCCCCCCCCCCCCCcCCcCC
Q 006581 466 PHKQADPFDYGGGHVDPNKAMD 487 (639)
Q Consensus 466 ~~~~~~~~~~G~G~id~~~A~~ 487 (639)
......||+|+||+.+|++
T Consensus 269 ---~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 269 ---TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp ---CSCGGGGTTCBCCHHHHHH
T ss_pred ---CCCCCCcceeecCHHHHHH
Confidence 2334579999999999987
No 19
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=6.1e-47 Score=424.81 Aligned_cols=247 Identities=27% Similarity=0.198 Sum_probs=193.1
Q ss_pred CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecC------CCCCCHHHHHHHHHHHHhCCCcE
Q 006581 70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWA------PGGCSSADLLAAFDDATFDGVDV 143 (639)
Q Consensus 70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~------~~~~~~~~i~~ai~~a~~~g~dV 143 (639)
++.|..||||||||||||..+ +.++.||||+|+|+.+|+++. .+....+.+++||+||+++|++|
T Consensus 193 d~~d~~gHGThVAGiIAa~~n---------g~gv~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadV 263 (671)
T 1r6v_A 193 DSSYGGSAGTHVAGTIAAKKD---------GKGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKV 263 (671)
T ss_dssp BCCTTCSHHHHHHHHHHCCCS---------SSSCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSE
T ss_pred CCccCCCcchhhhhhhhccCC---------CCceEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCE
Confidence 345678999999999999741 224689999999999999976 13345677999999999999999
Q ss_pred EEEccCCCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCC-CcccCCCCcEEEEEeeccCCccceEEEeCCceEEE
Q 006581 144 ISLSLGSSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYP-QTVINTAPWVITVAASTIDRAFPTAITMGNNQTVV 222 (639)
Q Consensus 144 In~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~ 222 (639)
||||||... ....+..++++|.++|++||+||||+|... ...+...|++|+|||++.+.
T Consensus 264 IN~SlG~~~-----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g--------------- 323 (671)
T 1r6v_A 264 MNHSWGGWG-----YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYG--------------- 323 (671)
T ss_dssp EEECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEET---------------
T ss_pred EEeCCCCCC-----CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCC---------------
Confidence 999999863 346788899999999999999999999764 45566779999999864321
Q ss_pred eEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEe
Q 006581 223 GQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFA 302 (639)
Q Consensus 223 g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~ 302 (639)
T Consensus 324 -------------------------------------------------------------------------------- 323 (671)
T 1r6v_A 324 -------------------------------------------------------------------------------- 323 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCC
Q 006581 303 KFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGV 382 (639)
Q Consensus 303 ~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~ 382 (639)
....++.||++||.. ||+|||+
T Consensus 324 --------------------------------------------------~~~~~a~fSn~G~~v--------dv~APG~ 345 (671)
T 1r6v_A 324 --------------------------------------------------GTFRVAGFSSRSDGV--------SVGAPGV 345 (671)
T ss_dssp --------------------------------------------------TEEEECSSSCCCTTE--------EEEEECS
T ss_pred --------------------------------------------------CceeeccccCCCCCe--------eEEecCC
Confidence 001578999999987 9999999
Q ss_pred cEEeccCCCCCCccCCCC-CCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCcccc
Q 006581 383 NILASWSPVSNLEQTDHV-TPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIV 461 (639)
Q Consensus 383 ~I~sa~~~~~~~~~~~~~-~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~ 461 (639)
+|+|+++......-.... ......++.|..++|||||||||||++|||+|++|+|++.+||++|++||+++...|
T Consensus 346 ~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g---- 421 (671)
T 1r6v_A 346 TILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG---- 421 (671)
T ss_dssp SEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS----
T ss_pred CEEeecCCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC----
Confidence 999998854211100000 000011458999999999999999999999999999999999999999999764222
Q ss_pred ccCCCCCCCCCCCCCCCCCCcCCcCCCCeeeeCcc
Q 006581 462 AEGAPHKQADPFDYGGGHVDPNKAMDPGLVYDMEV 496 (639)
Q Consensus 462 ~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~ 496 (639)
....||||+||+.+|++..|..+...
T Consensus 422 ---------~d~~~G~G~vna~~Al~~~l~~~~~~ 447 (671)
T 1r6v_A 422 ---------WDHDTGYGLVKLDAALQGPLPTQGGV 447 (671)
T ss_dssp ---------CBTTTBTCBCCHHHHHHCCCCSSSEE
T ss_pred ---------CCCCcccceeCHHHHhhhhcCCCCCc
Confidence 24579999999999999766555433
No 20
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=4.6e-47 Score=401.38 Aligned_cols=254 Identities=19% Similarity=0.122 Sum_probs=201.2
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
|||||| +||+|.+. ++.+++|..+.. ......+.|..|||||
T Consensus 51 iDsGid-~Hp~l~~~---------------------------~~~~~~~~~~~~----------~~~~~~~~d~~gHGT~ 92 (347)
T 2iy9_A 51 VDSGVA-FIGGLSDS---------------------------EFAKFSFTQDGS----------PFPVKKSEALYIHGTA 92 (347)
T ss_dssp EESCCC-CCGGGTTC---------------------------EEEEEECBTTCC----------SSCCSSSHHHHHHHHH
T ss_pred EcCCCc-CChhhhcC---------------------------cccCCcccCCCC----------CCCCCCCCCCCCcHHH
Confidence 799999 99999543 344455654311 0111245678899999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhC------CCcEEEEccCCCCCC
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFD------GVDVISLSLGSSLPL 154 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~------g~dVIn~SlG~~~~~ 154 (639)
|||||+|+. ++.||||+|+|+.+|++...+.. ++++||+||+++ |++|||||||...
T Consensus 93 vAgiia~~~------------g~~GvAp~a~l~~~~v~~~~~~~---~~~~ai~~a~~~~~~~~~~~~Vin~S~G~~~-- 155 (347)
T 2iy9_A 93 MASLIASRY------------GIYGVYPHALISSRRVIPDGVQD---SWIRAIESIMSNVFLAPGEEKIINISGGQKG-- 155 (347)
T ss_dssp HHHHHHCSS------------SSCCSSTTCEEEEEECCSSBCTT---HHHHHHHHHHTCTTSCTTEEEEEEESSCBCC--
T ss_pred HHHHHhccc------------CCcccCCCCEEEEEEEecCCCHH---HHHHHHHHHHhhhhcccCCceEEEeccccCC--
Confidence 999999871 24899999999999999763322 999999999999 9999999999873
Q ss_pred CCCccchHHHHHHHhHhCCcEEEEeccCCCCC-------CCcccCCCC----------cEEEEEeecc--CCccceEEEe
Q 006581 155 STYVDDIISIGSFHAVAKGISVVCSAGNSGPY-------PQTVINTAP----------WVITVAASTI--DRAFPTAITM 215 (639)
Q Consensus 155 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------~~~~~~~ap----------~vitVgA~~~--~~~~~~~~~~ 215 (639)
.......+..++.++.++|++||+||||+|.. ....+...+ ++|+|||++. +..
T Consensus 156 ~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~~g~------- 228 (347)
T 2iy9_A 156 VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRKGE------- 228 (347)
T ss_dssp C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCCTTS-------
T ss_pred CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCCCCc-------
Confidence 12356778889999999999999999999975 334555567 9999998654 110
Q ss_pred CCceEEEeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCC
Q 006581 216 GNNQTVVGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSG 295 (639)
Q Consensus 216 ~~~~~~~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~G 295 (639)
.
T Consensus 229 ---------------~---------------------------------------------------------------- 229 (347)
T 2iy9_A 229 ---------------T---------------------------------------------------------------- 229 (347)
T ss_dssp ---------------C----------------------------------------------------------------
T ss_pred ---------------e----------------------------------------------------------------
Confidence 0
Q ss_pred ceEEEEecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCC
Q 006581 296 GVGLIFAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKP 375 (639)
Q Consensus 296 a~g~i~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KP 375 (639)
....+.++.||++||+ ||
T Consensus 230 -------------------------------------------------------~~~~~~~~~fS~~G~~-------~~ 247 (347)
T 2iy9_A 230 -------------------------------------------------------PVLHGGGITGSRFGNN-------WV 247 (347)
T ss_dssp -------------------------------------------------------CCBCCCSSSCBCBCTT-------TC
T ss_pred -------------------------------------------------------ecccCCCCCCCCCCCC-------CC
Confidence 0001356799999994 67
Q ss_pred ceEcCCCcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCc
Q 006581 376 DIAAPGVNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDE 455 (639)
Q Consensus 376 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~ 455 (639)
||+|||++|+++++ ++.|..++|||||||||||++|||+|++|+|++.+||++|++||+++..
T Consensus 248 di~APG~~i~s~~~-----------------~~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 310 (347)
T 2iy9_A 248 DIAAPGQNITFLRP-----------------DAKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPS 310 (347)
T ss_dssp SEEEECSSEEEECT-----------------TSCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGG
T ss_pred EEEeCCCCeEeecC-----------------CCCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCC
Confidence 99999999999998 5789999999999999999999999999999999999999999997532
Q ss_pred CCccccccCCCCCCCCCCCCCCCCCCcCCcCCC
Q 006581 456 YAQSIVAEGAPHKQADPFDYGGGHVDPNKAMDP 488 (639)
Q Consensus 456 ~g~p~~~~~~~~~~~~~~~~G~G~id~~~A~~~ 488 (639)
. ....+|+|+||+.+|++.
T Consensus 311 ~--------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 311 L--------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp G--------------TTTSGGGEECCHHHHHHH
T ss_pred C--------------CCccccCCEecHHHHHHH
Confidence 1 125899999999999983
No 21
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=1.3e-46 Score=414.37 Aligned_cols=222 Identities=26% Similarity=0.293 Sum_probs=187.0
Q ss_pred CCCCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEc
Q 006581 68 FLSPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLS 147 (639)
Q Consensus 68 ~~~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~S 147 (639)
...+.|..||||||||||+|+. .+.||||+|+|+++|+++. +.+...++++||+||+++|++|||||
T Consensus 192 ~~~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~-~~~~~~~i~~ai~~a~~~g~~Vin~S 258 (471)
T 3t41_A 192 VHDVNDRKGHGTMVSGQTSANG------------KLIGVAPNNKFTMYRVFGS-KKTELLWVSKAIVQAANDGNQVINIS 258 (471)
T ss_dssp TTCCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSCEEEEECCSS-SCCCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCcCCCCccchhhheeecCC------------ceeEECCCCeEEEEEeccC-CCCcHHHHHHHHHHHHhCCCCEEEeC
Confidence 3467889999999999999863 2589999999999999987 77889999999999999999999999
Q ss_pred cCCCCC------CC-----CCccchHHHHHHHhHhCCcEEEEeccCCCCCCCc------------------ccCCCCcEE
Q 006581 148 LGSSLP------LS-----TYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQT------------------VINTAPWVI 198 (639)
Q Consensus 148 lG~~~~------~~-----~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~------------------~~~~ap~vi 198 (639)
||.... .. ....+.+..+++++.++|++||+||||+|..... .+...+++|
T Consensus 259 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vi 338 (471)
T 3t41_A 259 VGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVV 338 (471)
T ss_dssp CCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEE
T ss_pred CCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeE
Confidence 997420 00 0123567888889999999999999999976432 455678899
Q ss_pred EEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeC
Q 006581 199 TVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQS 278 (639)
Q Consensus 199 tVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~ 278 (639)
+|||++.+
T Consensus 339 tVgA~~~~------------------------------------------------------------------------ 346 (471)
T 3t41_A 339 TVGSTDQK------------------------------------------------------------------------ 346 (471)
T ss_dssp EEEEECTT------------------------------------------------------------------------
T ss_pred EEEeeCCC------------------------------------------------------------------------
Confidence 99975422
Q ss_pred CCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeee
Q 006581 279 QFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVA 358 (639)
Q Consensus 279 ~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 358 (639)
+.++
T Consensus 347 ----------------------------------------------------------------------------~~~a 350 (471)
T 3t41_A 347 ----------------------------------------------------------------------------SNLS 350 (471)
T ss_dssp ----------------------------------------------------------------------------SSBC
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 4678
Q ss_pred cccCCCCCCCCCCCcCCceEcCCCc----------------------EEeccCCCCCCccCCCCCCCccCCCceeeeccc
Q 006581 359 FFSSRGPSSLSPSVLKPDIAAPGVN----------------------ILASWSPVSNLEQTDHVTPNYIPQFNFKVESGT 416 (639)
Q Consensus 359 ~fSS~Gp~~~~~~~~KPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGT 416 (639)
.||++||+. |||+|||++ |+++++ ++.|..++||
T Consensus 351 ~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~-----------------~~~~~~~sGT 406 (471)
T 3t41_A 351 EFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTAN-----------------NGRYIYQAGT 406 (471)
T ss_dssp TTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECT-----------------TSSEEEECSH
T ss_pred CccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCC-----------------CCCEEeecch
Confidence 999999963 499999987 888887 5789999999
Q ss_pred cchhHHHHHHHHHHHhhCC-CCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCCCCCCCCCCCCcCCcCCC
Q 006581 417 SMSCPHISGIVALLKAIHP-TWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQADPFDYGGGHVDPNKAMDP 488 (639)
Q Consensus 417 SmAaP~VAG~aALl~q~~p-~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G~id~~~A~~~ 488 (639)
|||||||||++|||+|++| .|+|++||++|++||.+.. ..+...||||+||+.+|++.
T Consensus 407 S~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~--------------~~~~~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 407 ALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKN--------------NKPFSRYGHGELDVYKALNV 465 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCS--------------CCCHHHHTTCBBCHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCC--------------CCCcCccccChhCHHHHHHH
Confidence 9999999999999999999 8999999999999999642 14456899999999999984
No 22
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=9.3e-46 Score=402.74 Aligned_cols=249 Identities=28% Similarity=0.301 Sum_probs=192.6
Q ss_pred CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCC--CHHHHHHHHHHHHhCCCcEEEEc
Q 006581 70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGC--SSADLLAAFDDATFDGVDVISLS 147 (639)
Q Consensus 70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~--~~~~i~~ai~~a~~~g~dVIn~S 147 (639)
++.|..||||||||||+|+.. .+.||||+|+|+++|++...+.. ...++.++|++|+++|++|||||
T Consensus 61 ~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~~g~~Vin~S 129 (434)
T 1wmd_A 61 NANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHTNS 129 (434)
T ss_dssp CCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHhcCCeEEEec
Confidence 467889999999999998642 25799999999999999764433 45679999999999999999999
Q ss_pred cCCCCCCCCCccchHHHHHHHh-HhCCcEEEEeccCCCCCCCc--ccCCCCcEEEEEeeccCCccceEEEeCCceEEEeE
Q 006581 148 LGSSLPLSTYVDDIISIGSFHA-VAKGISVVCSAGNSGPYPQT--VINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQ 224 (639)
Q Consensus 148 lG~~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~~~--~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~ 224 (639)
||... .. ..+....+++++ .++|++||+||||+|....+ .+..++++|+|||++..+..
T Consensus 130 ~G~~~-~~--~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~--------------- 191 (434)
T 1wmd_A 130 WGAAV-NG--AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPS--------------- 191 (434)
T ss_dssp CCBCC-TT--CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGG---------------
T ss_pred CCCCc-CC--cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCcc---------------
Confidence 99874 11 123455666665 58999999999999976443 44567999999997643200
Q ss_pred EeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecC
Q 006581 225 AFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKF 304 (639)
Q Consensus 225 ~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~ 304 (639)
. +..
T Consensus 192 ------~------------------------------------------------~~~---------------------- 195 (434)
T 1wmd_A 192 ------F------------------------------------------------GSY---------------------- 195 (434)
T ss_dssp ------G------------------------------------------------CGG----------------------
T ss_pred ------c------------------------------------------------Ccc----------------------
Confidence 0 000
Q ss_pred CCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcE
Q 006581 305 PTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNI 384 (639)
Q Consensus 305 ~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I 384 (639)
....+.++.||++||+. ++++||||+|||++|
T Consensus 196 ----------------------------------------------~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i 227 (434)
T 1wmd_A 196 ----------------------------------------------ADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFI 227 (434)
T ss_dssp ----------------------------------------------GSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSE
T ss_pred ----------------------------------------------cCCCCccccccCCCCCC--CCCCCceEEcCCCCe
Confidence 01235889999999998 899999999999999
Q ss_pred EeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCC-----CHHHHHHHHHhcCccCCcCCcc
Q 006581 385 LASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTW-----SPAAIKSAIVTTASLKDEYAQS 459 (639)
Q Consensus 385 ~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~l-----s~~~vk~~L~~TA~~~~~~g~p 459 (639)
+++++......... ....+.|..++|||||||||||++|||+|++|++ ++++||++|++||+++.
T Consensus 228 ~s~~~~~~~~~~~~-----~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~----- 297 (434)
T 1wmd_A 228 LSARSSLAPDSSFW-----ANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG----- 297 (434)
T ss_dssp EEECCTTCCGGGSS-----EEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS-----
T ss_pred EecCCCCCCCcccc-----cCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccC-----
Confidence 99986432110000 0004689999999999999999999999998875 89999999999998641
Q ss_pred ccccCCCCCCCCCCCCCCCCCCcCCcCCCC
Q 006581 460 IVAEGAPHKQADPFDYGGGHVDPNKAMDPG 489 (639)
Q Consensus 460 ~~~~~~~~~~~~~~~~G~G~id~~~A~~~~ 489 (639)
...+...||||+||+.+|++..
T Consensus 298 --------~~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 298 --------LGYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp --------SCSSCTTTTTCBCCHHHHHTCE
T ss_pred --------CCCCCccCCcCeEeHHHhcccc
Confidence 2345678999999999999754
No 23
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=3.9e-45 Score=385.76 Aligned_cols=227 Identities=27% Similarity=0.260 Sum_probs=187.4
Q ss_pred CCCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHh----------
Q 006581 69 LSPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATF---------- 138 (639)
Q Consensus 69 ~~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~---------- 138 (639)
.+..|..||||||||||+|...++ ..+.||||+|+|+.+|++...+ +...+++++|+||++
T Consensus 96 ~~~~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~~v~~~~~-~~~~~~~~ai~~a~~~~~~~~~~~~ 166 (340)
T 3lpc_A 96 KERSDSSWHGSHVAGTIAAVTNNR--------IGVAGVAYGAKVVPVRALGRCG-GYDSDISDGLYWAAGGRIAGIPENR 166 (340)
T ss_dssp GSCBCCCCHHHHHHHHHHCCCSSS--------SSCCCTTTTSEEEEEECCBTTB-CCHHHHHHHHHHHHTCCCTTSCCCS
T ss_pred cCCCCCCCCHHHHHHHHHccCCCC--------CcceeecCCCEEEEEEEecCCC-CcHHHHHHHHHHHhccccccccccc
Confidence 346788999999999999986432 2358999999999999998744 788999999999998
Q ss_pred CCCcEEEEccCCCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCC-cccCCCCcEEEEEeeccCCccceEEEeCC
Q 006581 139 DGVDVISLSLGSSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQ-TVINTAPWVITVAASTIDRAFPTAITMGN 217 (639)
Q Consensus 139 ~g~dVIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgA~~~~~~~~~~~~~~~ 217 (639)
.+++|||||||... .....+..+++++.++|++||+||||+|.... ..+...+++|+|||++..
T Consensus 167 ~~~~Vin~S~G~~~----~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------- 231 (340)
T 3lpc_A 167 NPAKVINMSLGSDG----QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR----------- 231 (340)
T ss_dssp SCCSEEEECCCEES----CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT-----------
T ss_pred CCCeEEEeCcCCCC----CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC-----------
Confidence 89999999999863 34556778889999999999999999997643 345667899999975422
Q ss_pred ceEEEeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCce
Q 006581 218 NQTVVGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGV 297 (639)
Q Consensus 218 ~~~~~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~ 297 (639)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCce
Q 006581 298 GLIFAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDI 377 (639)
Q Consensus 298 g~i~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI 377 (639)
+.++.||++||. |||
T Consensus 232 ---------------------------------------------------------~~~~~~S~~g~~--------~di 246 (340)
T 3lpc_A 232 ---------------------------------------------------------GIRASFSNYGVD--------VDL 246 (340)
T ss_dssp ---------------------------------------------------------SSBCTTCCBSTT--------CCE
T ss_pred ---------------------------------------------------------CCcCCCCCCCCC--------ceE
Confidence 467899999984 599
Q ss_pred EcCCCcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhh-C---CCCCHHHHHHHHHhcCccC
Q 006581 378 AAPGVNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAI-H---PTWSPAAIKSAIVTTASLK 453 (639)
Q Consensus 378 ~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---p~ls~~~vk~~L~~TA~~~ 453 (639)
+|||++|+++++...... . .+.|..++|||||||||||++|||+|+ + |.|++++||++|++||+++
T Consensus 247 ~ApG~~i~s~~~~~~~~~---------~-~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~ 316 (340)
T 3lpc_A 247 AAPGQDILSTVDSGTRRP---------V-SDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPF 316 (340)
T ss_dssp EEECSSEEEEEESCSSSC---------C-SEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCC
T ss_pred EecCCCeecccCCCCcCC---------C-CCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcC
Confidence 999999999987532110 0 356999999999999999999999998 5 9999999999999999965
Q ss_pred CcCCccccccCCCCCCCCCCCCCCCCCCcCCcCCC
Q 006581 454 DEYAQSIVAEGAPHKQADPFDYGGGHVDPNKAMDP 488 (639)
Q Consensus 454 ~~~g~p~~~~~~~~~~~~~~~~G~G~id~~~A~~~ 488 (639)
. ..+...||+|+||+.+|++.
T Consensus 317 ~--------------~~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 317 N--------------GRLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp S--------------SCCSSCCCSSBCCHHHHHHH
T ss_pred C--------------CCCCCCcccceecHHHHHHH
Confidence 2 12345899999999999874
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=3e-44 Score=368.02 Aligned_cols=218 Identities=27% Similarity=0.381 Sum_probs=186.3
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.+. ++.+++|.+. ..++.|..|||||
T Consensus 36 iDtGvd~~h~~l~~~---------------------------~~~~~~~~~~---------------~~~~~d~~gHGT~ 73 (284)
T 1sh7_A 36 IDTGVNNNHEEFGGR---------------------------SVSGYDFVDN---------------DADSSDCNGHGTH 73 (284)
T ss_dssp EESCCCTTCTTTTTC---------------------------EEEEEETTTT---------------BSCCCCSSSHHHH
T ss_pred EcCCCCCCChhHcCC---------------------------ccccccccCC---------------CCCCCCCCCcHHH
Confidence 799999999999542 3345566543 1246788999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHh--CCCcEEEEccCCCCCCCCCc
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATF--DGVDVISLSLGSSLPLSTYV 158 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~--~g~dVIn~SlG~~~~~~~~~ 158 (639)
|||||+|.. .||||+|+|+.+|++...+.+..+++++||+|+++ .+++|||||||...
T Consensus 74 vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~~~------ 133 (284)
T 1sh7_A 74 VAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLGGGQ------ 133 (284)
T ss_dssp HHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEECCCBSC------
T ss_pred HHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCCCCC------
Confidence 999999873 69999999999999987677889999999999998 47999999999862
Q ss_pred cchHHHHHHHhHhCCcEEEEeccCCCCCCC-cccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCcee
Q 006581 159 DDIISIGSFHAVAKGISVVCSAGNSGPYPQ-TVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKFY 237 (639)
Q Consensus 159 ~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 237 (639)
...+..+++++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 134 ~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------------- 182 (284)
T 1sh7_A 134 STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS------------------------------- 182 (284)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT-------------------------------
T ss_pred CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC-------------------------------
Confidence 356888889999999999999999996542 345567899999975422
Q ss_pred eeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccE
Q 006581 238 PIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPY 317 (639)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~ 317 (639)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCccC
Q 006581 318 IQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQT 397 (639)
Q Consensus 318 ~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~ 397 (639)
+.++.||++||.+ ||+|||++|+++++
T Consensus 183 -------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~-------- 209 (284)
T 1sh7_A 183 -------------------------------------DSRSSFSNWGSCV--------DLFAPGSQIKSAWY-------- 209 (284)
T ss_dssp -------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECT--------
T ss_pred -------------------------------------CCcCcccCCCCcc--------EEEeccCCeEEecC--------
Confidence 4678999999976 99999999999987
Q ss_pred CCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccC
Q 006581 398 DHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLK 453 (639)
Q Consensus 398 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~ 453 (639)
.+.|..++|||||||||||++|||+|++|+|+++|||++|++||++.
T Consensus 210 ---------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 256 (284)
T 1sh7_A 210 ---------DGGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASEN 256 (284)
T ss_dssp ---------TSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred ---------CCCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccC
Confidence 47899999999999999999999999999999999999999999964
No 25
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=1.6e-44 Score=369.16 Aligned_cols=214 Identities=30% Similarity=0.351 Sum_probs=183.8
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.+. +..+++|.. ++.|..|||||
T Consensus 38 iDsGvd~~H~~l~~~---------------------------~~~~~~~~~------------------~~~d~~gHGT~ 72 (279)
T 2pwa_A 38 IDTGIEASHPEFEGR---------------------------AQMVKTYYY------------------SSRDGNGHGTH 72 (279)
T ss_dssp EESCCCTTCGGGTTC---------------------------EEEEEESSS------------------CSSCSSSHHHH
T ss_pred EeCCCCCCChhHhCc---------------------------cccccCCCC------------------CCCCCCCCHHH
Confidence 799999999999553 233455541 34578999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCC-------cEEEEccCCCCC
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGV-------DVISLSLGSSLP 153 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~-------dVIn~SlG~~~~ 153 (639)
|||||+|+. .||||+|+|+.+|++...+.+..++++++|+|++++++ +|||||||..
T Consensus 73 vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~-- 136 (279)
T 2pwa_A 73 CAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGG-- 136 (279)
T ss_dssp HHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE--
T ss_pred HHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEEEecCCCC--
Confidence 999999862 69999999999999987677889999999999999887 9999999975
Q ss_pred CCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCC-cccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCC
Q 006581 154 LSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQ-TVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKED 232 (639)
Q Consensus 154 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 232 (639)
..+.+..+++++.++|++||+||||+|.... ..+...|++|+|||++.+
T Consensus 137 ----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~-------------------------- 186 (279)
T 2pwa_A 137 ----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY-------------------------- 186 (279)
T ss_dssp ----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT--------------------------
T ss_pred ----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC--------------------------
Confidence 2467888889999999999999999997543 345667999999975422
Q ss_pred CCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCcc
Q 006581 233 LNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFS 312 (639)
Q Consensus 233 ~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~ 312 (639)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCC
Q 006581 313 FGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVS 392 (639)
Q Consensus 313 ~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~ 392 (639)
+.++.||++||.+ ||+|||++|+++++
T Consensus 187 ------------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~--- 213 (279)
T 2pwa_A 187 ------------------------------------------DRRSSFSNYGSVL--------DIFGPGTDILSTWI--- 213 (279)
T ss_dssp ------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEEET---
T ss_pred ------------------------------------------CCcCCcCCCCCcc--------eEEEecCCeEEeec---
Confidence 4678999999976 99999999999987
Q ss_pred CCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccC
Q 006581 393 NLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLK 453 (639)
Q Consensus 393 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~ 453 (639)
.+.|..++|||||||||||++|||+|+ |++++.|||++|++||++.
T Consensus 214 --------------~~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~ 259 (279)
T 2pwa_A 214 --------------GGSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKG 259 (279)
T ss_dssp --------------TTEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEES
T ss_pred --------------CCCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccc
Confidence 468999999999999999999999999 9999999999999999964
No 26
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=2.9e-44 Score=405.74 Aligned_cols=254 Identities=23% Similarity=0.186 Sum_probs=170.2
Q ss_pred CCCC-CCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCC-HHHHHHHHHHHHhCCCcEEEEc
Q 006581 70 SPRD-AVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCS-SADLLAAFDDATFDGVDVISLS 147 (639)
Q Consensus 70 ~~~D-~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~-~~~i~~ai~~a~~~g~dVIn~S 147 (639)
.|.| ..||||||||||||. .++ ..+.||||+|+|+.+|++...+... ...+++....+..++++|||||
T Consensus 107 ~p~d~~~gHGT~vAGiiaa~-~n~--------~g~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S 177 (600)
T 2oxa_A 107 TPTDPDTGHGTSVSGIIAAV-DNA--------IGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHS 177 (600)
T ss_dssp CCCSTTCCHHHHHHHHHHCC-SSS--------SSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEEC
T ss_pred CCCCCCCCCccHHHHHhhcc-cCC--------CcceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEe
Confidence 3455 789999999999998 322 2358999999999999998744332 2344444444777899999999
Q ss_pred cCCCCCCCCCcc----chHHHHHHH---hHhCCcEEEEeccCCCCCCCc----------------------ccCCCCcEE
Q 006581 148 LGSSLPLSTYVD----DIISIGSFH---AVAKGISVVCSAGNSGPYPQT----------------------VINTAPWVI 198 (639)
Q Consensus 148 lG~~~~~~~~~~----~~~~~a~~~---a~~~Gi~vV~AAGN~G~~~~~----------------------~~~~ap~vi 198 (639)
||.... ..... ..+..++.+ +.++|++||+||||+|..... ..+.++|+|
T Consensus 178 ~G~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vI 256 (600)
T 2oxa_A 178 YRMSVV-DPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNL 256 (600)
T ss_dssp CCCCCS-SCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEE
T ss_pred ccCCCC-CccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeE
Confidence 998741 11111 222222222 457899999999999963210 111233444
Q ss_pred EEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeC
Q 006581 199 TVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQS 278 (639)
Q Consensus 199 tVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~ 278 (639)
+|||++
T Consensus 257 tVgA~~-------------------------------------------------------------------------- 262 (600)
T 2oxa_A 257 VVSALN-------------------------------------------------------------------------- 262 (600)
T ss_dssp EEEEEC--------------------------------------------------------------------------
T ss_pred EEeccc--------------------------------------------------------------------------
Confidence 444422
Q ss_pred CCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeee
Q 006581 279 QFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVA 358 (639)
Q Consensus 279 ~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 358 (639)
..+.++
T Consensus 263 --------------------------------------------------------------------------~~g~~a 268 (600)
T 2oxa_A 263 --------------------------------------------------------------------------ADGVRS 268 (600)
T ss_dssp --------------------------------------------------------------------------TTSSBC
T ss_pred --------------------------------------------------------------------------CCCCcC
Confidence 235788
Q ss_pred cccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCccCCCCCCCc------------------cCCCceeeeccccchh
Q 006581 359 FFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQTDHVTPNY------------------IPQFNFKVESGTSMSC 420 (639)
Q Consensus 359 ~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~------------------~~~~~y~~~sGTSmAa 420 (639)
.||++||+. ||+|||++|.++.+...... ..++...+ ...+.|..++||||||
T Consensus 269 ~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd-~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~Aa 339 (600)
T 2oxa_A 269 SYSSVGSNI--------FLSATGGEYGTDTPAMVTTD-LPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSAT 339 (600)
T ss_dssp TTCCBCTTE--------EEEEECCSCSSSSCCEEEEC-CSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHH
T ss_pred CcCCCCCCe--------EEEeccCCCCcCCCceEecc-ccccccccccccccccccccccccccCCcccccccccchHHh
Confidence 999999988 99999999755544210000 00000000 0024589999999999
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccc---------------cC---CCCCCCCCCCCCCCCCCc
Q 006581 421 PHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVA---------------EG---APHKQADPFDYGGGHVDP 482 (639)
Q Consensus 421 P~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~---------------~~---~~~~~~~~~~~G~G~id~ 482 (639)
|||||++|||+|++|+|++++||++|++||++++..+.++.. .+ ........+.||||+||+
T Consensus 340 P~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda 419 (600)
T 2oxa_A 340 PSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDV 419 (600)
T ss_dssp HHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhH
Confidence 999999999999999999999999999999988654422110 00 012223457899999999
Q ss_pred CCcCCCCe
Q 006581 483 NKAMDPGL 490 (639)
Q Consensus 483 ~~A~~~~l 490 (639)
.+|++.+.
T Consensus 420 ~~Av~~A~ 427 (600)
T 2oxa_A 420 NKALELAA 427 (600)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99998433
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=8.7e-44 Score=364.06 Aligned_cols=220 Identities=29% Similarity=0.377 Sum_probs=186.3
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.+. +..+++|.++ ..++.|..|||||
T Consensus 38 iDtGid~~Hpdl~~~---------------------------~~~~~d~~~~---------------~~~~~d~~gHGT~ 75 (278)
T 2b6n_A 38 IDTGVLNTHNEFGGR---------------------------ASSGYDFIDN---------------DYDATDCNGHGTH 75 (278)
T ss_dssp EESCCCTTCGGGTTC---------------------------EEEEEETTTT---------------BSCCCCSSSHHHH
T ss_pred EeCCCCCCChhHhcc---------------------------cccCeecCCC---------------CCCCCCCCCcHHH
Confidence 799999999999553 2334566543 1246788999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHh--CCCcEEEEccCCCCCCCCCc
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATF--DGVDVISLSLGSSLPLSTYV 158 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~--~g~dVIn~SlG~~~~~~~~~ 158 (639)
|||||+|.. .||||+|+|+.+|++.+.+.+..++++++|+|+++ .+++|||||||...
T Consensus 76 vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~~~------ 135 (278)
T 2b6n_A 76 VAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLGGGA------ 135 (278)
T ss_dssp HHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC------
T ss_pred HHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEECCCCCc------
Confidence 999999862 69999999999999987677889999999999997 59999999999863
Q ss_pred cchHHHHHHHhHhCCcEEEEeccCCCCCCC-cccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCcee
Q 006581 159 DDIISIGSFHAVAKGISVVCSAGNSGPYPQ-TVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKFY 237 (639)
Q Consensus 159 ~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 237 (639)
.+.+..+++++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 136 ~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------------- 184 (278)
T 2b6n_A 136 SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN------------------------------- 184 (278)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-------------------------------
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC-------------------------------
Confidence 356788889999999999999999997543 235567899999975422
Q ss_pred eeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccE
Q 006581 238 PIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPY 317 (639)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~ 317 (639)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCccC
Q 006581 318 IQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQT 397 (639)
Q Consensus 318 ~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~ 397 (639)
+.++.||++||.+ ||+|||++|++++...
T Consensus 185 -------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~------ 213 (278)
T 2b6n_A 185 -------------------------------------DSRSSFSNYGTCL--------DIYAPGSSITSSWYTS------ 213 (278)
T ss_dssp -------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTS------
T ss_pred -------------------------------------CCcCCcCCCCCCC--------eEEeCCCCeECcccCC------
Confidence 3677899999865 9999999999998742
Q ss_pred CCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccC
Q 006581 398 DHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLK 453 (639)
Q Consensus 398 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~ 453 (639)
.+.|..++|||||||||||++|||+|++|+|++.|||++|++||++.
T Consensus 214 ---------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 214 ---------NSATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp ---------TTCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred ---------CCCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 47899999999999999999999999999999999999999999864
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.3e-43 Score=362.86 Aligned_cols=219 Identities=28% Similarity=0.373 Sum_probs=187.0
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.+. +...++|... ++.|..|||||
T Consensus 38 iDtGvd~~h~~l~~~---------------------------~~~~~~~~~~-----------------~~~d~~gHGT~ 73 (276)
T 4dzt_A 38 IDTGIRTTHREFGGR---------------------------ARVGYDALGG-----------------NGQDCNGHGTH 73 (276)
T ss_dssp EESCCCTTCGGGTTC---------------------------EEEEEETTSS-----------------CSCCSSSHHHH
T ss_pred EccCCCCCChhHccC---------------------------eeccccCCCC-----------------CCCCCCCCHHH
Confidence 799999999999553 2334455432 45678999999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhC--CCcEEEEccCCCCCCCCCc
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFD--GVDVISLSLGSSLPLSTYV 158 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~--g~dVIn~SlG~~~~~~~~~ 158 (639)
|||||+|.. .||||+|+|+.+|++...+.....+++++|+|+++. +++|||||||...
T Consensus 74 vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~~~------ 133 (276)
T 4dzt_A 74 VAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLGGGV------ 133 (276)
T ss_dssp HHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC------
T ss_pred HHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECCCCCC------
Confidence 999999873 699999999999999877788999999999999986 9999999999762
Q ss_pred cchHHHHHHHhHhCCcEEEEeccCCCCCCCcc-cCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCcee
Q 006581 159 DDIISIGSFHAVAKGISVVCSAGNSGPYPQTV-INTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKFY 237 (639)
Q Consensus 159 ~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 237 (639)
...+..+++++.++|+++|+||||+|...... +...+++|+|||++.+
T Consensus 134 ~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------------- 182 (276)
T 4dzt_A 134 STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS------------------------------- 182 (276)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-------------------------------
T ss_pred CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC-------------------------------
Confidence 46688888999999999999999999764433 5667889999975422
Q ss_pred eeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccE
Q 006581 238 PIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPY 317 (639)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~ 317 (639)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCccC
Q 006581 318 IQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQT 397 (639)
Q Consensus 318 ~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~ 397 (639)
+.++.||++||.. ||+|||++|++++...
T Consensus 183 -------------------------------------~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~------ 211 (276)
T 4dzt_A 183 -------------------------------------DARASFSNYGSCV--------DLFAPGASIPSAWYTS------ 211 (276)
T ss_dssp -------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTS------
T ss_pred -------------------------------------CCcCCcCCCCCCc--------eEEeCCCCeEccccCC------
Confidence 4778999999987 9999999999998753
Q ss_pred CCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCC
Q 006581 398 DHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKD 454 (639)
Q Consensus 398 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~ 454 (639)
...|..++|||||||+|||++|||+|++|+|++++||++|++||++..
T Consensus 212 ---------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 212 ---------DTATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp ---------SSCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred ---------CCceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 468999999999999999999999999999999999999999999753
No 29
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=7.4e-43 Score=379.67 Aligned_cols=231 Identities=20% Similarity=0.208 Sum_probs=177.8
Q ss_pred CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhC------CCcE
Q 006581 70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFD------GVDV 143 (639)
Q Consensus 70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~------g~dV 143 (639)
++.|..||||||||||+|+. .||||+|+|+.+|+++..+.+..+++++||+|+++. +++|
T Consensus 67 ~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~V 132 (546)
T 2qtw_B 67 QASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLV 132 (546)
T ss_dssp -CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEE
T ss_pred CCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeE
Confidence 45688999999999999873 699999999999999876677889999999999974 9999
Q ss_pred EEEccCCCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCC-cccCCCCcEEEEEeeccCCccceEEEeCCceEEE
Q 006581 144 ISLSLGSSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQ-TVINTAPWVITVAASTIDRAFPTAITMGNNQTVV 222 (639)
Q Consensus 144 In~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~ 222 (639)
||||||.. ....+..+++++.++|++||+||||+|.... ..+...|++|+|||++.....
T Consensus 133 INmSlGg~------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~------------- 193 (546)
T 2qtw_B 133 VLLPLAGG------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------------- 193 (546)
T ss_dssp EEECEEEE------CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB-------------
T ss_pred EEecCCCC------CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc-------------
Confidence 99999965 2457888899999999999999999997542 335667999999986543100
Q ss_pred eEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEe
Q 006581 223 GQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFA 302 (639)
Q Consensus 223 g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~ 302 (639)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCC
Q 006581 303 KFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGV 382 (639)
Q Consensus 303 ~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~ 382 (639)
...-..||++|+.+ ||+|||+
T Consensus 194 ---------------------------------------------------a~~s~~fSn~G~~v--------DI~APG~ 214 (546)
T 2qtw_B 194 ---------------------------------------------------VTLGTLGTNFGRCV--------DLFAPGE 214 (546)
T ss_dssp ---------------------------------------------------CEETTEECCBSTTC--------CEEEECS
T ss_pred ---------------------------------------------------ccccCCcCCCCCcc--------eEEecCc
Confidence 00001289999854 9999999
Q ss_pred cEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccc
Q 006581 383 NILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVA 462 (639)
Q Consensus 383 ~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~ 462 (639)
+|+++++.. ...|..++|||||||||||++|||+|++|+|+++|||++|++||.+.......+..
T Consensus 215 ~I~St~~~~---------------~~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~ 279 (546)
T 2qtw_B 215 DIIGASSDC---------------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPE 279 (546)
T ss_dssp SEEEECTTS---------------TTCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCH
T ss_pred cEEeeccCC---------------CCcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCcc
Confidence 999998743 46799999999999999999999999999999999999999999864321110000
Q ss_pred ---cCCC----CCCCCCCCCCCCC--CCcCCcCC
Q 006581 463 ---EGAP----HKQADPFDYGGGH--VDPNKAMD 487 (639)
Q Consensus 463 ---~~~~----~~~~~~~~~G~G~--id~~~A~~ 487 (639)
.+.. ..+.....+|+|+ .++..+..
T Consensus 280 ~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 280 DQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp HHHTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred ccCCCCccchhccCCcccccCCCcchhchhccCC
Confidence 0000 1122455678888 77776664
No 30
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=2.5e-42 Score=381.44 Aligned_cols=232 Identities=18% Similarity=0.122 Sum_probs=180.6
Q ss_pred CCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccCCC
Q 006581 72 RDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLGSS 151 (639)
Q Consensus 72 ~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG~~ 151 (639)
.|..||||||||||||...++ ..+.||||+|+|+.+|++.. .+...++++||+|+++++ +|||||||..
T Consensus 95 ~d~~gHGT~vAGiiaa~~~n~--------~~~~GvAp~a~i~~~rv~~~--~~~~~~~~~ai~~a~~~~-~Iin~S~G~~ 163 (503)
T 2id4_A 95 LSDDYHGTRCAGEIAAKKGNN--------FCGVGVGYNAKISGIRILSG--DITTEDEAASLIYGLDVN-DIYSCSWGPA 163 (503)
T ss_dssp STTTTHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECTTS--CCCHHHHHHHTTTTTTTC-SEEEECEESC
T ss_pred CCCCChHHHHHHHHHhccCCC--------CCcEEECCCCEEEEEEeeCC--CCChHHHHHHHHhHhhcC-CEEEeCCCcC
Confidence 578899999999999986332 23589999999999999974 477889999999999998 9999999987
Q ss_pred CCCCC--CccchHHHHHHHhH-----hCCcEEEEeccCCCCCCCc--ccC--CCCcEEEEEeeccCCccceEEEeCCceE
Q 006581 152 LPLST--YVDDIISIGSFHAV-----AKGISVVCSAGNSGPYPQT--VIN--TAPWVITVAASTIDRAFPTAITMGNNQT 220 (639)
Q Consensus 152 ~~~~~--~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~~--~~~--~ap~vitVgA~~~~~~~~~~~~~~~~~~ 220 (639)
..+.. .....+..++.++. .+|++||+||||+|..... .+. .++++|+|||++.+
T Consensus 164 ~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~-------------- 229 (503)
T 2id4_A 164 DDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK-------------- 229 (503)
T ss_dssp CSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT--------------
T ss_pred CCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC--------------
Confidence 42111 12244666666666 4799999999999965332 222 45789999975422
Q ss_pred EEeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEE
Q 006581 221 VVGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLI 300 (639)
Q Consensus 221 ~~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i 300 (639)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEc-
Q 006581 301 FAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAA- 379 (639)
Q Consensus 301 ~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~A- 379 (639)
+.++.||++||.. |++|
T Consensus 230 ------------------------------------------------------~~~a~~S~~g~~~--------~~~a~ 247 (503)
T 2id4_A 230 ------------------------------------------------------DLHPPYSEGCSAV--------MAVTY 247 (503)
T ss_dssp ------------------------------------------------------SCCCTTCCCCTTE--------EEEEE
T ss_pred ------------------------------------------------------CCcCCcCCCCCcc--------eEeec
Confidence 4677999999988 8887
Q ss_pred ---CCCcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcC
Q 006581 380 ---PGVNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEY 456 (639)
Q Consensus 380 ---PG~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~ 456 (639)
||..|+++... ++.|..++|||||||||||++|||+|++|+|++.+||.+|+.||++++..
T Consensus 248 ~~gpG~~I~st~~~----------------~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~ 311 (503)
T 2id4_A 248 SSGSGEYIHSSDIN----------------GRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKN 311 (503)
T ss_dssp CSBTTBCEEEECST----------------TCEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTC
T ss_pred CCCCCCceEeecCC----------------CCceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCC
Confidence 89999998543 47899999999999999999999999999999999999999999987533
Q ss_pred -CccccccCCCCCCCCCCCCCCCCCCcCCcCCC
Q 006581 457 -AQSIVAEGAPHKQADPFDYGGGHVDPNKAMDP 488 (639)
Q Consensus 457 -g~p~~~~~~~~~~~~~~~~G~G~id~~~A~~~ 488 (639)
....... .........||||+||+++|++.
T Consensus 312 ~~~~~~~~--~~g~~~~~~~G~G~vda~~Av~~ 342 (503)
T 2id4_A 312 ADGDWRDS--AMGKKYSHRYGFGKIDAHKLIEM 342 (503)
T ss_dssp GGGCCEEC--SSSSEEBTTTBTCBCCHHHHHHH
T ss_pred cCCCceec--CCCCccCcccCCcEecHHHHHHH
Confidence 1111111 11122345799999999999984
No 31
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=4.8e-43 Score=384.68 Aligned_cols=239 Identities=18% Similarity=0.140 Sum_probs=183.0
Q ss_pred CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHh-CCCcEEEEcc
Q 006581 70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATF-DGVDVISLSL 148 (639)
Q Consensus 70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~-~g~dVIn~Sl 148 (639)
.+.|..||||||||||||...++ ..+.||||+|+|+.+|++. +...++++|++++++ ++++||||||
T Consensus 80 ~~~d~~gHGT~vAGiiaa~~~n~--------~g~~GvAp~a~i~~~rv~~----g~~~~~~~ai~~a~~~~~~~Vin~S~ 147 (471)
T 1p8j_A 80 TQMNDNRHGTRCAGEVAAVANNG--------VCGVGVAYNARIGGVRMLD----GEVTDAVEARSLGLNPNHIHIYSASW 147 (471)
T ss_dssp CTTCTTCHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECSS----SCCCHHHHHHHHTSCTTTCCEEEECC
T ss_pred CCCCCCCcHHHHHHHHHeeccCC--------CCCEEECCCCeEEEEEccC----CchhHHHHHHHhhhccCCCeEEEecc
Confidence 45688999999999999975432 2358999999999999985 335789999999999 9999999999
Q ss_pred CCCCCCCC--CccchHHHHHHHhHh-----CCcEEEEeccCCCCCCCc--c--cCCCCcEEEEEeeccCCccceEEEeCC
Q 006581 149 GSSLPLST--YVDDIISIGSFHAVA-----KGISVVCSAGNSGPYPQT--V--INTAPWVITVAASTIDRAFPTAITMGN 217 (639)
Q Consensus 149 G~~~~~~~--~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~G~~~~~--~--~~~ap~vitVgA~~~~~~~~~~~~~~~ 217 (639)
|....+.. .....+..++.++.+ +|++||+||||+|..... . ...++++|+|||++.+
T Consensus 148 G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~----------- 216 (471)
T 1p8j_A 148 GPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF----------- 216 (471)
T ss_dssp BSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT-----------
T ss_pred CcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC-----------
Confidence 98642110 112334555555553 699999999999975332 1 2245889999975422
Q ss_pred ceEEEeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCce
Q 006581 218 NQTVVGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGV 297 (639)
Q Consensus 218 ~~~~~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~ 297 (639)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCce
Q 006581 298 GLIFAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDI 377 (639)
Q Consensus 298 g~i~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI 377 (639)
+.++.||++||.. ....+|..
T Consensus 217 ---------------------------------------------------------g~~a~~S~~g~~~--~~~~~~~~ 237 (471)
T 1p8j_A 217 ---------------------------------------------------------GNVPWYSEACSST--LATTYSSG 237 (471)
T ss_dssp ---------------------------------------------------------SCCCTTCCBCTTC--CEEEECCC
T ss_pred ---------------------------------------------------------CCcccccCCCCcc--eEEeCCCC
Confidence 4678999999987 55566677
Q ss_pred EcCCCcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCC
Q 006581 378 AAPGVNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYA 457 (639)
Q Consensus 378 ~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g 457 (639)
.+||..|+++... +..|..++|||||||||||++|||+|++|+|++++||++|++||++++...
T Consensus 238 ~~~g~~i~st~~~----------------~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~ 301 (471)
T 1p8j_A 238 NQNEKQIVTTDLR----------------QKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA 301 (471)
T ss_dssp STTSCCEEEEETT----------------TEEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCC
T ss_pred CCCCCCEEEeeCC----------------CCccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCC
Confidence 7778899998763 467999999999999999999999999999999999999999999875432
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCcCCcCCC
Q 006581 458 QSIVAEGAPHKQADPFDYGGGHVDPNKAMDP 488 (639)
Q Consensus 458 ~p~~~~~~~~~~~~~~~~G~G~id~~~A~~~ 488 (639)
.....+ .........||||+||+.+|++.
T Consensus 302 ~~~~~n--~~g~~~~~~~G~G~vda~~Av~~ 330 (471)
T 1p8j_A 302 DDWATN--GVGRKVSHSYGYGLLDAGAMVAL 330 (471)
T ss_dssp SCCEEC--TTSCEEBTTTBTCBCCHHHHHHH
T ss_pred CCceec--CCCcccCCCCCCEEEcHhHHHHH
Confidence 212111 11122456899999999999984
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=9.4e-43 Score=357.01 Aligned_cols=214 Identities=29% Similarity=0.359 Sum_probs=183.2
Q ss_pred CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006581 1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH 80 (639)
Q Consensus 1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH 80 (639)
||||||++||+|.+. +...+.|..+ ..|..|||||
T Consensus 39 iDtGvd~~h~~l~~~---------------------------~~~~~~~~~~------------------~~d~~gHGT~ 73 (279)
T 3f7m_A 39 IDTGVEDTHPDFEGR---------------------------AKQIKSYAST------------------ARDGHGHGTH 73 (279)
T ss_dssp EESCCCTTCGGGTTC---------------------------EEEEEECSSS------------------SSCSSSHHHH
T ss_pred EcCCCCCCChhhccc---------------------------cccccCCCCC------------------CCCCCCcHHH
Confidence 799999999999553 2334445332 2278899999
Q ss_pred hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCC-------CcEEEEccCCCCC
Q 006581 81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDG-------VDVISLSLGSSLP 153 (639)
Q Consensus 81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g-------~dVIn~SlG~~~~ 153 (639)
|||||+|+. .||||+|+|+.+|++...+.+..++++++|+|+++++ ++|||||||..
T Consensus 74 vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~-- 137 (279)
T 3f7m_A 74 CAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGG-- 137 (279)
T ss_dssp HHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE--
T ss_pred HHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcC--
Confidence 999999863 6999999999999998877889999999999999876 89999999965
Q ss_pred CCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCCcc-cCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCC
Q 006581 154 LSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTV-INTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKED 232 (639)
Q Consensus 154 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 232 (639)
..+.+..++.++.++|++||+||||+|...... +...+++|+|||++.+
T Consensus 138 ----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~-------------------------- 187 (279)
T 3f7m_A 138 ----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN-------------------------- 187 (279)
T ss_dssp ----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT--------------------------
T ss_pred ----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC--------------------------
Confidence 346788888999999999999999999764433 5667899999975422
Q ss_pred CCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCcc
Q 006581 233 LNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFS 312 (639)
Q Consensus 233 ~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~ 312 (639)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCC
Q 006581 313 FGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVS 392 (639)
Q Consensus 313 ~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~ 392 (639)
+.++.||++||.. ||+|||++|+++++
T Consensus 188 ------------------------------------------~~~~~~S~~g~~~--------di~ApG~~i~s~~~--- 214 (279)
T 3f7m_A 188 ------------------------------------------DVRSTFSNYGRVV--------DIFAPGTSITSTWI--- 214 (279)
T ss_dssp ------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECG---
T ss_pred ------------------------------------------CCCCCCCCCCCCC--------eEEECCCCeEeecC---
Confidence 4678999999976 99999999999987
Q ss_pred CCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccC
Q 006581 393 NLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLK 453 (639)
Q Consensus 393 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~ 453 (639)
.+.|..++|||||||+|||++|||+|++|+ ++++||++|++||++.
T Consensus 215 --------------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~ 260 (279)
T 3f7m_A 215 --------------GGRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKN 260 (279)
T ss_dssp --------------GGCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEES
T ss_pred --------------CCCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccc
Confidence 577999999999999999999999999999 9999999999999964
No 33
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=3.7e-44 Score=399.71 Aligned_cols=197 Identities=22% Similarity=0.281 Sum_probs=0.0
Q ss_pred CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhC------CCcE
Q 006581 70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFD------GVDV 143 (639)
Q Consensus 70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~------g~dV 143 (639)
++.|..||||||||||+|+. .||||+|+|+++||+++.+.+..+++++||+|++++ |++|
T Consensus 219 ~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~V 284 (692)
T 2p4e_P 219 QASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLV 284 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceE
Confidence 56789999999999999873 699999999999999876778889999999999986 8999
Q ss_pred EEEccCCCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCCc-ccCCCCcEEEEEeeccCCccceEEEeCCceEEE
Q 006581 144 ISLSLGSSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQT-VINTAPWVITVAASTIDRAFPTAITMGNNQTVV 222 (639)
Q Consensus 144 In~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~ 222 (639)
||||||+.. ...+..+++++.++|++||+||||+|..... .++..|++|+|||++.+..
T Consensus 285 INmSlGg~~------s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~-------------- 344 (692)
T 2p4e_P 285 VLLPLAGGY------SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQ-------------- 344 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEecCCCCC------cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCC--------------
Confidence 999999652 3567778888999999999999999976433 3556799999998653310
Q ss_pred eEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEe
Q 006581 223 GQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFA 302 (639)
Q Consensus 223 g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~ 302 (639)
T Consensus 345 -------------------------------------------------------------------------------- 344 (692)
T 2p4e_P 345 -------------------------------------------------------------------------------- 344 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCC
Q 006581 303 KFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGV 382 (639)
Q Consensus 303 ~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~ 382 (639)
....-+.||+|||. |||+|||+
T Consensus 345 --------------------------------------------------~a~~ss~fSn~G~~--------vDI~APG~ 366 (692)
T 2p4e_P 345 --------------------------------------------------PVTLGTLGTNFGRC--------VDLFAPGE 366 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------ccccccccCCCCCc--------eeEEecCC
Confidence 00001238999984 49999999
Q ss_pred cEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccC
Q 006581 383 NILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLK 453 (639)
Q Consensus 383 ~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~ 453 (639)
+|+|+++.. .+.|..++|||||||||||++|||+|++|+|++++||++|++||.+.
T Consensus 367 ~I~St~~~~---------------~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 367 DIIGASSDC---------------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cEEeeccCC---------------CCceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 999999742 36799999999999999999999999999999999999999999864
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=4.2e-41 Score=381.23 Aligned_cols=275 Identities=19% Similarity=0.087 Sum_probs=168.6
Q ss_pred CCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHH-HHHHhCCCcEEEEccC
Q 006581 71 PRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAF-DDATFDGVDVISLSLG 149 (639)
Q Consensus 71 ~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai-~~a~~~g~dVIn~SlG 149 (639)
..|.+||||||||||||.. + +..+.||||+|+|+.+|++++.+.....+++.|+ +++..++++|||||||
T Consensus 109 ~~~~~gHGThVAGiIAa~~-n--------~~g~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G 179 (600)
T 3hjr_A 109 TDPDTAHGTSVSGIIAAVD-N--------AIGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYG 179 (600)
T ss_dssp CSTTCCHHHHHHHHHHCCS-S--------SSSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCC
T ss_pred CCCCCChHHHHHHHHhEeC-C--------CCCcEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccC
Confidence 3457899999999999863 1 1235899999999999999876777788877776 6677889999999999
Q ss_pred CCCCCCCCccch----HHHHHHHh--HhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEe
Q 006581 150 SSLPLSTYVDDI----ISIGSFHA--VAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVG 223 (639)
Q Consensus 150 ~~~~~~~~~~~~----~~~a~~~a--~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g 223 (639)
............ +..++..+ ..+|+++|+||||.+....... +.+.+....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~------~~~~~~g~~----------------- 236 (600)
T 3hjr_A 180 MSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG------YVLNRTGNG----------------- 236 (600)
T ss_dssp CCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT------EEEEEESSC-----------------
T ss_pred ccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc------cccccCCCC-----------------
Confidence 764221122211 22222222 2689999999999874211000 000000000
Q ss_pred EEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEec
Q 006581 224 QAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAK 303 (639)
Q Consensus 224 ~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~ 303 (639)
.. .....|..... ......|
T Consensus 237 -----------~~----------------~~~~~~~~d~~--~~~~~~I------------------------------- 256 (600)
T 3hjr_A 237 -----------PK----------------LPFENSNLDPS--NSNFWNL------------------------------- 256 (600)
T ss_dssp -----------CC----------------CCSSBTTSSGG--GGSSSEE-------------------------------
T ss_pred -----------CC----------------CCcccccccCc--cccCcce-------------------------------
Confidence 00 00001100000 0000000
Q ss_pred CCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCc
Q 006581 304 FPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVN 383 (639)
Q Consensus 304 ~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~ 383 (639)
++......+.++.||++|+.. +++|||..
T Consensus 257 -------------------------------------------sVgA~~~~g~~a~yS~~G~~v--------~~~apg~~ 285 (600)
T 3hjr_A 257 -------------------------------------------VVSALNADGVRSSYSSVGSNI--------FLSATGGE 285 (600)
T ss_dssp -------------------------------------------EEEEECTTSSBCTTCCBCTTC--------CEEEECCS
T ss_pred -------------------------------------------EEeeecCCCCEeecccCCcce--------eeccCCCC
Confidence 011122346888999999988 89999876
Q ss_pred EE--------eccCCCCCCc---------cCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHH
Q 006581 384 IL--------ASWSPVSNLE---------QTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAI 446 (639)
Q Consensus 384 I~--------sa~~~~~~~~---------~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L 446 (639)
+. +..+...... ..............|..++|||||||||||++|||+|++|+|+++|||++|
T Consensus 286 ~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L 365 (600)
T 3hjr_A 286 YGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLL 365 (600)
T ss_dssp CSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHH
T ss_pred CCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHH
Confidence 32 2222110000 000000000114678999999999999999999999999999999999999
Q ss_pred HhcCccCCcCCcccccc---------------CC---CCCCCCCCCCCCCCCCcCCcCCC
Q 006581 447 VTTASLKDEYAQSIVAE---------------GA---PHKQADPFDYGGGHVDPNKAMDP 488 (639)
Q Consensus 447 ~~TA~~~~~~g~p~~~~---------------~~---~~~~~~~~~~G~G~id~~~A~~~ 488 (639)
++||++++....|+... ++ .....-...||||+||+.+|++.
T Consensus 366 ~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~ 425 (600)
T 3hjr_A 366 ARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALEL 425 (600)
T ss_dssp HHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHH
T ss_pred HhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHH
Confidence 99999998766653211 00 11122245699999999999873
No 35
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=2.9e-21 Score=203.85 Aligned_cols=102 Identities=21% Similarity=0.189 Sum_probs=78.9
Q ss_pred eeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHh-CCCcEEEEccCCCCCC--CCCccchHHHHHHHhHhCCcEEEEec
Q 006581 104 RGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATF-DGVDVISLSLGSSLPL--STYVDDIISIGSFHAVAKGISVVCSA 180 (639)
Q Consensus 104 ~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~-~g~dVIn~SlG~~~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AA 180 (639)
..+||+|+++.|++... ..+..++++.+|+||++ ++++|||||||..... .....+.+..++.+|..+||+||+||
T Consensus 90 g~~aP~a~~~~~~~~~~-~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~As 168 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQ-SASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSS 168 (372)
T ss_dssp HHTTSCEEEEEEEEECT-TSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhcCCCCcEEEEEeCCC-CCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 44789999999999865 34677889999999998 8999999999976300 00122456777778889999999999
Q ss_pred cCCCCCCC-------------cccCCCCcEEEEEeeccC
Q 006581 181 GNSGPYPQ-------------TVINTAPWVITVAASTID 206 (639)
Q Consensus 181 GN~G~~~~-------------~~~~~ap~vitVgA~~~~ 206 (639)
||+|...+ ..+...|+|++||+++..
T Consensus 169 Gd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 169 GDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp CSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 99996532 334567999999998654
No 36
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.83 E-value=6.7e-21 Score=210.94 Aligned_cols=99 Identities=23% Similarity=0.333 Sum_probs=78.3
Q ss_pred ccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHh---CCCcEEEEccCCCCCCCCCc---cchHHHHHHHhHhCCc
Q 006581 101 GLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATF---DGVDVISLSLGSSLPLSTYV---DDIISIGSFHAVAKGI 174 (639)
Q Consensus 101 ~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~---~g~dVIn~SlG~~~~~~~~~---~~~~~~a~~~a~~~Gi 174 (639)
..+.||||+|+|+.|++.+ ..++++.+|+||++ ++++|||||||... ..+. ...+..++.+|..+||
T Consensus 272 ~~~~gvAp~a~i~~~~~~~-----~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e--~~~~~~~~~~~~~~~~~a~~~Gi 344 (552)
T 1t1e_A 272 EVAGALAPGAKIAVYFAPN-----TDAGFLNAITTAVHDPTHKPSIVSISWGGPE--DSWAPASIAAMNRAFLDAAALGV 344 (552)
T ss_dssp HHHHHHCTTSEEEEEECCS-----SHHHHHHHHHHHHTCTTTCCSEEEECEEEEG--GGSCHHHHHHHHHHHHHHHHTTC
T ss_pred hhhhccCCCCeEEEEEcCC-----CCchHHHHHHHHHhcccCCCCEEEecccCCc--ccCCHHHHHHHHHHHHHHHhCCe
Confidence 3568999999999999742 45789999999998 79999999999873 1111 2456777778889999
Q ss_pred EEEEeccCCCCCC--------CcccCCCCcEEEEEeeccC
Q 006581 175 SVVCSAGNSGPYP--------QTVINTAPWVITVAASTID 206 (639)
Q Consensus 175 ~vV~AAGN~G~~~--------~~~~~~ap~vitVgA~~~~ 206 (639)
+||+||||+|... ...+...|+|++||+++..
T Consensus 345 ~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 345 TVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp EEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred EEEEecCCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 9999999999643 2344567999999998643
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.02 E-value=7.8e-10 Score=121.57 Aligned_cols=101 Identities=17% Similarity=0.143 Sum_probs=62.9
Q ss_pred eeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHH--hCCCcEEEEccCCCCCC-CCCccchHHHHHHHhHhCCcEEEEec
Q 006581 104 RGGAPLAWLAIYKICWAPGGCSSADLLAAFDDAT--FDGVDVISLSLGSSLPL-STYVDDIISIGSFHAVAKGISVVCSA 180 (639)
Q Consensus 104 ~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~--~~g~dVIn~SlG~~~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AA 180 (639)
.+++++..++.|-.... ....+.++..+++.. .+-++|||+|||..... ...+.+.+..++.++..+||.|++|+
T Consensus 262 ~a~~~~i~~~~~~~~g~--~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~AS 339 (544)
T 3edy_A 262 MSAGANISTWVYSSPGR--HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFAS 339 (544)
T ss_dssp HHHSTTSEEEEECCCSC--CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hccCCCceEEEEecCCc--ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 34555556555543211 112234455444443 35688999999987410 00112345566677889999999999
Q ss_pred cCCCCCC----------CcccCCCCcEEEEEeeccC
Q 006581 181 GNSGPYP----------QTVINTAPWVITVAASTID 206 (639)
Q Consensus 181 GN~G~~~----------~~~~~~ap~vitVgA~~~~ 206 (639)
||+|... ...++..|||++||+++..
T Consensus 340 GD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l~ 375 (544)
T 3edy_A 340 GDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSFQ 375 (544)
T ss_dssp CSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEES
T ss_pred CCCCccccCCCCCccccCCCcCCCCcEEEEeeeecc
Confidence 9999643 2345577999999998653
No 38
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.72 E-value=6.3e-08 Score=91.24 Aligned_cols=91 Identities=13% Similarity=0.163 Sum_probs=74.2
Q ss_pred ccCccCCCCCCCcc-------ccccEEEEEeCCCc-chHHHHHHhhhcCCceEEEEecCCC-C-C---C--CccccccEE
Q 006581 254 SARSCESGTLNATL-------VRGKIVICFQSQFQ-RSAATAARTVLDSGGVGLIFAKFPT-K-D---V--HFSFGVPYI 318 (639)
Q Consensus 254 ~~~~c~~~~~~~~~-------~~gkivl~~~~~g~-~~~~~k~~~~~~~Ga~g~i~~~~~~-~-~---~--~~~~~ip~~ 318 (639)
....|.+....... .++||+|++| |. |+|.+|..+++++||.++||||+.. + . + +....||++
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~R--G~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv 159 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQR--GGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAI 159 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEES--CTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEEC--CCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEE
Confidence 46789886543322 4789999999 98 9999999999999999999999742 1 1 1 233579999
Q ss_pred EEchhhHHHHHHHHHhcCCcEEEEEece
Q 006581 319 QVDFAIGTSLLTYMEANRNPIVKFSFTK 346 (639)
Q Consensus 319 ~i~~~~~~~l~~~~~~~~~~~~~i~~~~ 346 (639)
+|+..+|+.|++++.++..++++|....
T Consensus 160 ~Is~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 160 MIGNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp EECHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred EECHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 9999999999999999988888877654
No 39
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.74 E-value=0.0059 Score=65.26 Aligned_cols=69 Identities=16% Similarity=0.127 Sum_probs=58.5
Q ss_pred CCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCC----C--CccccccEEEEchhhHHHHHHHHH
Q 006581 263 LNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKD----V--HFSFGVPYIQVDFAIGTSLLTYME 333 (639)
Q Consensus 263 ~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~----~--~~~~~ip~~~i~~~~~~~l~~~~~ 333 (639)
+...+++|||||+.+ |.|.|.+|..+++++||.|+|++++.... . +....||...++.++++.|+..+.
T Consensus 108 ~~~~dv~GkIvlv~~--g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 108 VAGKDLNGKIALIQR--GNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTSCCTTSEEEEEC--CSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred cCCCCcCceEEEEeC--CCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 344589999999999 89999999999999999999999876433 1 134679999999999999999984
No 40
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.85 E-value=0.028 Score=60.29 Aligned_cols=80 Identities=14% Similarity=0.209 Sum_probs=60.5
Q ss_pred CccccccEEEEEeCCCcch---------HHHH----HHhhhcCCceEEEEecCCCCC--------C--C-ccccccEEEE
Q 006581 265 ATLVRGKIVICFQSQFQRS---------AATA----ARTVLDSGGVGLIFAKFPTKD--------V--H-FSFGVPYIQV 320 (639)
Q Consensus 265 ~~~~~gkivl~~~~~g~~~---------~~~k----~~~~~~~Ga~g~i~~~~~~~~--------~--~-~~~~ip~~~i 320 (639)
..+++|||||+.+ +.|. +..| ..+|.++||.|+|++++.... . . ....||++.|
T Consensus 124 ~~dvkGKIVlv~~--~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~I 201 (444)
T 3iib_A 124 AGSLNDKIAFIDA--KTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAI 201 (444)
T ss_dssp TTTTTTCEEEECC--CCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEE
T ss_pred ccccCccEEEEeC--CCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEe
Confidence 4689999999988 6663 4444 457999999999999864321 1 1 2357999999
Q ss_pred chhhHHHHHHHHHhcCCcEEEEEece
Q 006581 321 DFAIGTSLLTYMEANRNPIVKFSFTK 346 (639)
Q Consensus 321 ~~~~~~~l~~~~~~~~~~~~~i~~~~ 346 (639)
+.++++.|+..+..+...++++....
T Consensus 202 s~~da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 202 SNPDADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp CHHHHHHHHHHHTTTCCCEEEEEEEE
T ss_pred cHHHHHHHHHHHhCCCCeEEEEEEee
Confidence 99999999999988776666665443
No 41
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.30 E-value=0.027 Score=62.94 Aligned_cols=66 Identities=23% Similarity=0.160 Sum_probs=54.5
Q ss_pred ccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCC-C-----------------C-----------------
Q 006581 266 TLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKD-V-----------------H----------------- 310 (639)
Q Consensus 266 ~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~-~-----------------~----------------- 310 (639)
.+++|||||+++ |.|.+.+|..+|+++||.|+|+|++..+. . +
T Consensus 128 vdv~GkIvlv~~--g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~ 205 (640)
T 3kas_A 128 TPVNGSIVIVRA--GKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSR 205 (640)
T ss_dssp SCCTTSEEEEES--CSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCS
T ss_pred cccCCcEEEEec--CCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccc
Confidence 579999999999 89999999999999999999999865321 0 0
Q ss_pred --ccccccEEEEchhhHHHHHHHHH
Q 006581 311 --FSFGVPYIQVDFAIGTSLLTYME 333 (639)
Q Consensus 311 --~~~~ip~~~i~~~~~~~l~~~~~ 333 (639)
....||+..|+.++++.|...+.
T Consensus 206 ~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 206 SSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp SCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred ccCCCCCCEEecCHHHHHHHHHHcc
Confidence 01258999999999999987654
No 42
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.75 E-value=0.024 Score=64.10 Aligned_cols=68 Identities=21% Similarity=0.268 Sum_probs=55.4
Q ss_pred CccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCC------------------C-----C------Cc----
Q 006581 265 ATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTK------------------D-----V------HF---- 311 (639)
Q Consensus 265 ~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~------------------~-----~------~~---- 311 (639)
..+++|||||+++ |.|.+.+|..+|+++||.|+|+|+++.+ . . .+
T Consensus 150 ~~~v~GkIvlv~~--G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TP 227 (707)
T 3fed_A 150 GINCTGKIVIARY--GKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTP 227 (707)
T ss_dssp CCCCTTCEEEEEC--CSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCT
T ss_pred CCCCCCeEEEEEC--CCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCC
Confidence 4579999999999 8899999999999999999999985210 0 0 00
Q ss_pred ------------------cccccEEEEchhhHHHHHHHHHh
Q 006581 312 ------------------SFGVPYIQVDFAIGTSLLTYMEA 334 (639)
Q Consensus 312 ------------------~~~ip~~~i~~~~~~~l~~~~~~ 334 (639)
...||+.-|+..+++.|+..+..
T Consensus 228 G~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 228 GYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp TSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred CCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 13689999999999999987753
No 43
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.73 E-value=0.1 Score=45.11 Aligned_cols=74 Identities=22% Similarity=0.230 Sum_probs=53.1
Q ss_pred CccEEEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEeecCCCceEEEEEEEE-cCceEEE
Q 006581 545 KKSITVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQGRYSFGNLFWE-DGIHVVR 623 (639)
Q Consensus 545 ~~~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~~-~~~~~v~ 623 (639)
+.+.+.+++|+|.|+.+..|++.... .++++|.+-++ ++|++..++|+|.+. .-..+.+.+... ++...+.
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~---~~g~~~~~l~v~~~~g~~~~ 111 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQ---SVGDHSGRLIVCYDTGEKVF 111 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCS---SSBCCCCBCEEEESSSCEEC
T ss_pred CCeEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcC---CCccEEEEEEEEECCCCEEE
Confidence 35788889999999999999877643 47889999888 579999999999864 223345554443 4444444
Q ss_pred EeE
Q 006581 624 IPL 626 (639)
Q Consensus 624 ~P~ 626 (639)
+++
T Consensus 112 v~L 114 (122)
T 2ys4_A 112 VSL 114 (122)
T ss_dssp CEE
T ss_pred EEE
Confidence 444
No 44
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.66 E-value=0.79 Score=38.49 Aligned_cols=66 Identities=11% Similarity=0.175 Sum_probs=46.8
Q ss_pred CcCeEEeccc--CccEEEEEEEEEcCCCCeeEEEEEeC-CCCceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006581 535 NLPSITIPEL--KKSITVSRQVTNVSPMNSVYTARVQA-PAGTTVRVEPSTLTFNSTRKKLKFKVTFYSR 601 (639)
Q Consensus 535 n~ps~~~~~~--~~~~~~~~tvtn~~~~~~ty~~~~~~-~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 601 (639)
+...+-++.+ +...+.+++++|.|+.+..|++.... +.+..++++|..-.+ ++|++.+++|++.+.
T Consensus 13 ~~~~ldFG~v~~g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~ 81 (112)
T 2e6j_A 13 NFELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSI 81 (112)
T ss_dssp SCSEEEEEEEESSCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCC
T ss_pred CcccEecEeEEECCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECC
Confidence 3344444433 34677788999999999999984211 112357789999888 579999999999864
No 45
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=87.25 E-value=0.35 Score=51.66 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=26.9
Q ss_pred cCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCC
Q 006581 352 QISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSP 390 (639)
Q Consensus 352 ~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~ 390 (639)
...+.++.||++|+.. ||+|||++|+++++.
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 3457899999999876 999999999999874
No 46
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=85.53 E-value=4.1 Score=34.57 Aligned_cols=54 Identities=13% Similarity=0.104 Sum_probs=42.6
Q ss_pred cEEEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEee
Q 006581 547 SITVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSRL 602 (639)
Q Consensus 547 ~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~ 602 (639)
.-..++++.|....+.+|.++++..+++++. .+..+++ ++|+.+++.|.+.++.
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 3556778899999999999999877775543 3556777 5799999999998863
No 47
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=83.92 E-value=11 Score=33.01 Aligned_cols=83 Identities=11% Similarity=0.055 Sum_probs=55.8
Q ss_pred ccEEEEEEEEEcCCCCeeEEEEEeCC----CCceEEEecCeEEEcCCCcEEEEEEEEEEeec----C-CC-ceEEEEEEE
Q 006581 546 KSITVSRQVTNVSPMNSVYTARVQAP----AGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLR----V-QG-RYSFGNLFW 615 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~~~~~~----~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~----~-~~-~~~~G~i~~ 615 (639)
...+-+++|+|.|.-+.+|++..... ..--++++|..-++ .+|++.+++|++.+.+. . .+ .-++--|++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 45677789999999999999974321 12247788999888 67999999999987531 0 01 112344444
Q ss_pred E-cCceEEEEeEEEE
Q 006581 616 E-DGIHVVRIPLIVR 629 (639)
Q Consensus 616 ~-~~~~~v~~P~~~~ 629 (639)
. .++.+..+|+-..
T Consensus 122 ~Ve~G~d~fI~v~g~ 136 (140)
T 3qbt_B 122 HLDRGKDYFLTISGN 136 (140)
T ss_dssp EETTSCEEEEEEEEE
T ss_pred EeecCCcEEEEEecc
Confidence 3 4567777777553
No 48
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=83.17 E-value=7.9 Score=36.74 Aligned_cols=80 Identities=11% Similarity=0.020 Sum_probs=52.1
Q ss_pred ccEEEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEeecCCCceEEEEEEEEc----C--c
Q 006581 546 KSITVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQGRYSFGNLFWED----G--I 619 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~~~----~--~ 619 (639)
...+.+++++|.|+.+.+++.. ..|....+...|..| ++|++.+++|++.......-+...+.|.+.. + .
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~-~~p~~~~~~~~~~~I---~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~ 94 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVV-SLPSFVSLDDRAFRL---QAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKK 94 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEE-ECCTTEECSCCEEEE---CSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCE
T ss_pred CcceEEEEEEeCCCCceEEEec-cCCCceEeeeCccee---CCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCcc
Confidence 3566688999999999888864 346665554444444 6799999999998653333345566666543 2 2
Q ss_pred eEEEEeEEEE
Q 006581 620 HVVRIPLIVR 629 (639)
Q Consensus 620 ~~v~~P~~~~ 629 (639)
...++|+...
T Consensus 95 ~~~~i~v~g~ 104 (220)
T 2qsv_A 95 AVDSVMVSLP 104 (220)
T ss_dssp EEEEEEEEEE
T ss_pred cccEEEEEEE
Confidence 3446666653
No 49
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=73.65 E-value=10 Score=39.03 Aligned_cols=56 Identities=11% Similarity=0.124 Sum_probs=43.8
Q ss_pred ccEEEEEEEEEcCCCCeeEEEEEeCCCCce----EEEecCeEEEcCCCcEEEEEEEEEEee
Q 006581 546 KSITVSRQVTNVSPMNSVYTARVQAPAGTT----VRVEPSTLTFNSTRKKLKFKVTFYSRL 602 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~~~~~~~g~~----v~v~p~~~~~~~~g~~~~~~v~~~~~~ 602 (639)
...+-++|++|.|..+.+|++......... ++++|..-++ .+|++++++|++.+..
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~ 105 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSK 105 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCT
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECH
Confidence 467777899999999999999654322222 7789998888 5799999999998764
No 50
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=73.07 E-value=34 Score=28.58 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=47.4
Q ss_pred CcCeEEecccCccEEEEEEEEEcCCCCeeEEEEEe-----CCCCceEEEecCeEEEcCCCc-EEEEEEEEEEeecCCCce
Q 006581 535 NLPSITIPELKKSITVSRQVTNVSPMNSVYTARVQ-----APAGTTVRVEPSTLTFNSTRK-KLKFKVTFYSRLRVQGRY 608 (639)
Q Consensus 535 n~ps~~~~~~~~~~~~~~tvtn~~~~~~ty~~~~~-----~~~g~~v~v~p~~~~~~~~g~-~~~~~v~~~~~~~~~~~~ 608 (639)
..+++.+.+-.+..+++++.+. +...+-++.+. +.+|........+|+|. +|| +++|+|.+.-+.......
T Consensus 8 ~~~~y~V~E~~g~~~v~V~R~g--~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~-~Get~k~i~V~I~dD~~~E~~E 84 (114)
T 3e9t_A 8 EPGHYTVMENCGEFEVRVVRRG--DISTYASVEYETQDGTASAGTDFVGRKGLLSFP-PGVDEQRFRIEVIDDDVFEEDE 84 (114)
T ss_dssp SSSEEEEETTCCEEEEEEEEEE--CCSSCEEEEEEEECSSSCBTTTBCCCEEEEEEC-TTCCEEEEEEEBCCCSSCCCCE
T ss_pred eCCEEEEEcCCeEEEEEEEEEC--CCCeeEEEEEEeECCccCCCCCceEcceEEEEe-CCcEEEEEEEEEEcCCCccCCE
Confidence 3456777765565555444444 33333333332 44565555556789995 565 466666554333333333
Q ss_pred EEEEEEEEc--CceEEEEeEEEEeEe
Q 006581 609 SFGNLFWED--GIHVVRIPLIVRTII 632 (639)
Q Consensus 609 ~~G~i~~~~--~~~~v~~P~~~~~~~ 632 (639)
.| +|.+.. +.-.+-.|-...++|
T Consensus 85 ~F-~v~L~~p~~~a~lg~~~~atvtI 109 (114)
T 3e9t_A 85 CF-YIRLFNPSEGVKLAVPMIATVMI 109 (114)
T ss_dssp EE-EEEEECCCTTEEECSCCEEEEEE
T ss_pred EE-EEEEECCCCCcEECCCCEEEEEE
Confidence 33 255554 234444454444444
No 51
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=70.41 E-value=48 Score=27.91 Aligned_cols=50 Identities=14% Similarity=0.167 Sum_probs=40.0
Q ss_pred EEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006581 549 TVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSR 601 (639)
Q Consensus 549 ~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 601 (639)
+.+++|+|.++....|.+....|.- ..|.|..=.+ .+|++.++.|+.+..
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 5678999999988999998877754 5567876555 689999999999864
No 52
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=64.34 E-value=26 Score=30.03 Aligned_cols=51 Identities=16% Similarity=0.198 Sum_probs=35.4
Q ss_pred CccEEEEEEEEEcCCCC-eeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEE
Q 006581 545 KKSITVSRQVTNVSPMN-SVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFY 599 (639)
Q Consensus 545 ~~~~~~~~tvtn~~~~~-~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~ 599 (639)
+...+++.+|+|.|... ..|++.+-. .|..+.-. .+.+ ++|++++|+++..
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~ 83 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWT 83 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEEC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEE
Confidence 45789999999999754 678887654 34444332 3345 6789888877775
No 53
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=64.17 E-value=61 Score=30.38 Aligned_cols=77 Identities=8% Similarity=0.074 Sum_probs=45.1
Q ss_pred ccEEEEEEEEEcCCCCeeEEEEEeCCCCc-eEEEecCeEEEcCCCcEEEEEEEEEEeecCCCc-e--EEEEEEEEcC---
Q 006581 546 KSITVSRQVTNVSPMNSVYTARVQAPAGT-TVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQGR-Y--SFGNLFWEDG--- 618 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~~~~~~~g~-~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~-~--~~G~i~~~~~--- 618 (639)
...+.+++++|.|+.+...+- ++..-|. .+..... .+ ++||+.+++|++..... .+. | ....|....+
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~-v~~scgct~~~~~~~--~i-~PGe~~~i~v~~~~~~~-~g~~~~~~~~~i~v~~N~~~ 208 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHS-VTTRNPALTAVPDRT--EI-KPGGSTLLRIAVDPQVM-KAEGWQSIAADISIICNDPQ 208 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEE-EEECSTTEEEEESCS--EE-CTTCEEEEEEEECHHHH-HHTTCSEEEEEEEEEESCTT
T ss_pred CeEEEEEEEEECCCCCEEEEE-EEeCCCCEeeecCCc--cC-CCCCEEEEEEEEecCCC-CCcccceeccEEEEEECCCC
Confidence 467778899999988877642 2333333 3333332 34 68999999999985422 122 1 4556654432
Q ss_pred ceEEEEeEE
Q 006581 619 IHVVRIPLI 627 (639)
Q Consensus 619 ~~~v~~P~~ 627 (639)
.+.+++.+-
T Consensus 209 ~p~~~l~i~ 217 (220)
T 2qsv_A 209 APLRRIKVK 217 (220)
T ss_dssp CSEEEEEEE
T ss_pred CcEEEEEEE
Confidence 344455544
No 54
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=62.45 E-value=15 Score=41.48 Aligned_cols=52 Identities=13% Similarity=0.194 Sum_probs=33.0
Q ss_pred cEEEEEEEEEcCCCCee--EEEEEeCCCCceEEEecC-------eEEEcCCCcEEEEEEEEEEe
Q 006581 547 SITVSRQVTNVSPMNSV--YTARVQAPAGTTVRVEPS-------TLTFNSTRKKLKFKVTFYSR 601 (639)
Q Consensus 547 ~~~~~~tvtn~~~~~~t--y~~~~~~~~g~~v~v~p~-------~~~~~~~g~~~~~~v~~~~~ 601 (639)
..+++++|||+|+.... -++-+..|.+. + ..|. .+.+ ++||++++++++...
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~-~-~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITYPSSA-P-RTPPKQLRGFAKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECCTTS-S-SCCSCEEEEEEEEEE-CTTCEEEEEEEEEGG
T ss_pred eEEEEEEEEeCCCCccceeeeeeeecCCCC-C-CchhHHhhhccccee-CCCCeEEEEEEEcHH
Confidence 57889999999976544 44444555332 1 1121 2234 689999999998854
No 55
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=58.78 E-value=57 Score=28.14 Aligned_cols=63 Identities=16% Similarity=0.190 Sum_probs=33.9
Q ss_pred CCcCeEEecccCccEEEEEEEEEcCCCCeeEEEEEe-----CCCCceEEEecCeEEEcCCCc-EEEEEEEEE
Q 006581 534 LNLPSITIPELKKSITVSRQVTNVSPMNSVYTARVQ-----APAGTTVRVEPSTLTFNSTRK-KLKFKVTFY 599 (639)
Q Consensus 534 ln~ps~~~~~~~~~~~~~~tvtn~~~~~~ty~~~~~-----~~~g~~v~v~p~~~~~~~~g~-~~~~~v~~~ 599 (639)
+..+++.+.+-.+..+ ++|+..|.....-++.+. +.+|........+|+|. +|| +++++|.+.
T Consensus 9 F~~~~y~V~E~~g~~~--v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~-~Get~k~i~V~I~ 77 (137)
T 3ead_A 9 FEPGHYTVMENCGEFE--VRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFP-PGVDEQRFRIEVI 77 (137)
T ss_dssp ESSCEEEEEGGGCEEE--EEEEEESCCSSCEEEEEEEECSSSCBTTTBCCCEEEEEEC-TTCCEEEEEEEBC
T ss_pred EcCCEEEEECCCeEEE--EEEEEECCCCceEEEEEEeECCCcCCCCcEeEeeEEEEEC-CCceEEEEEEEEe
Confidence 3445677766555544 445444444444444432 34455555455688995 555 456555554
No 56
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=56.22 E-value=76 Score=26.81 Aligned_cols=69 Identities=13% Similarity=0.080 Sum_probs=42.6
Q ss_pred cCccEEEEEEEEEcCCCC--------eeEEEEEeCCCCceEEEe---------cCeEEEcCCCcEEEEEEEEEEeecCCC
Q 006581 544 LKKSITVSRQVTNVSPMN--------SVYTARVQAPAGTTVRVE---------PSTLTFNSTRKKLKFKVTFYSRLRVQG 606 (639)
Q Consensus 544 ~~~~~~~~~tvtn~~~~~--------~ty~~~~~~~~g~~v~v~---------p~~~~~~~~g~~~~~~v~~~~~~~~~~ 606 (639)
..+...++++|+|.++.+ ..|.+.+....|-.|.-- -...++ ++||+++|++++.. ....+
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~-~~~pG 93 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE-VPEPG 93 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS-CCCSE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC-CCCCc
Confidence 346788999999998643 445555555566656511 123455 68999999999972 12234
Q ss_pred ce-EEEEEE
Q 006581 607 RY-SFGNLF 614 (639)
Q Consensus 607 ~~-~~G~i~ 614 (639)
.| +.+++.
T Consensus 94 ~Ytl~a~l~ 102 (120)
T 3isy_A 94 TYEVKVTFK 102 (120)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEEE
Confidence 44 455544
No 57
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=56.20 E-value=75 Score=29.91 Aligned_cols=61 Identities=10% Similarity=0.179 Sum_probs=40.0
Q ss_pred ccEEEEEEEEEcCCCCeeEEEEEeC---C--CCceEEEecCeEEEcCCCcEEEEEEEEEEeecCCCc
Q 006581 546 KSITVSRQVTNVSPMNSVYTARVQA---P--AGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQGR 607 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~~~~~---~--~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~ 607 (639)
+.+.++++|+|.++.+.--..-++. . ...-+-++|..+.+ .+|+++.++|.......+.+.
T Consensus 26 ~~k~~sl~l~N~~~~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl-~p~~~q~lRI~~~~~~LP~DR 91 (218)
T 4ay0_A 26 DAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAGGVFPRDK 91 (218)
T ss_dssp TCSCEEEEEECCSSSCEEEEEEEECTTSCCCSSCSEEEESSEEEE-CTTCEEEEEEEECSCCCCSSS
T ss_pred CCcEEEEEEEcCCCCCEEEEEEEecCCCCccccCCEEECCCeEEe-CCCCceEEEEEecCCCCCcCc
Confidence 4567789999988655433333432 1 12347899999999 578999999977643334433
No 58
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=54.98 E-value=2.5 Score=36.11 Aligned_cols=54 Identities=19% Similarity=0.180 Sum_probs=34.5
Q ss_pred EEEEEEEEEcCCCCeeEEEEEe-CCCCceEEEecCeEEEc-CCCcEEEEEEEEEEe
Q 006581 548 ITVSRQVTNVSPMNSVYTARVQ-APAGTTVRVEPSTLTFN-STRKKLKFKVTFYSR 601 (639)
Q Consensus 548 ~~~~~tvtn~~~~~~ty~~~~~-~~~g~~v~v~p~~~~~~-~~g~~~~~~v~~~~~ 601 (639)
..+..-|+|.+.+..+..+.++ .|.|++++++|.++++. ..-++++|.|++...
T Consensus 55 i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~ 110 (119)
T 2kq1_A 55 YEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMI 110 (119)
T ss_dssp CEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCC
T ss_pred EEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEEC
Confidence 3444455565533333334455 68999999999988876 345667777777643
No 59
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=53.30 E-value=37 Score=28.95 Aligned_cols=51 Identities=14% Similarity=0.175 Sum_probs=41.5
Q ss_pred cEEEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEE
Q 006581 547 SITVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYS 600 (639)
Q Consensus 547 ~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 600 (639)
..+-.++|+|.++...-|.+...+|.- ..|.|..=.+ .+|++..+.|+++.
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecC
Confidence 455668999999999999999888874 5567887666 67999999999886
No 60
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=53.23 E-value=83 Score=34.24 Aligned_cols=67 Identities=19% Similarity=0.181 Sum_probs=44.5
Q ss_pred CcCeEEecccCccEEEEEEEEEcCCCCeeE-EEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEeecCC
Q 006581 535 NLPSITIPELKKSITVSRQVTNVSPMNSVY-TARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQ 605 (639)
Q Consensus 535 n~ps~~~~~~~~~~~~~~tvtn~~~~~~ty-~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~ 605 (639)
..|.+++... ++.+++.+|+|-+.....- ++++..|.+..++. ....+ ++|++.+++++|.++....
T Consensus 363 ~~~~~~~~~g-~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~~~ 430 (601)
T 1w8o_A 363 TIPDVALEPG-QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPAGTT 430 (601)
T ss_dssp ECCCEEECTT-CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCTTCC
T ss_pred cCccceecCC-ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCCCCC
Confidence 3466776543 5888999999976543222 34466788888876 23334 5689999988888764333
No 61
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=52.48 E-value=38 Score=28.84 Aligned_cols=53 Identities=15% Similarity=0.209 Sum_probs=42.8
Q ss_pred ccEEEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006581 546 KSITVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSR 601 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 601 (639)
...+-.++|+|.++...-|.+...+|. ...|.|..=.+ .+|++.++.|+++..
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~--~y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPR--RYCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGG--GEEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCC--ceEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 456777999999999999999888885 45667887555 689999999999863
No 62
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=52.24 E-value=61 Score=26.83 Aligned_cols=50 Identities=10% Similarity=0.093 Sum_probs=40.2
Q ss_pred EEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006581 549 TVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSR 601 (639)
Q Consensus 549 ~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 601 (639)
+.+++|+|.++....|.+....|. ...|.|..=.+ .+|++.++.|+.+..
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~--~y~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNN--EYRIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSS--SEEEECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCC--ceEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 457899999999999999888775 45567877655 689999999999864
No 63
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=51.42 E-value=26 Score=39.55 Aligned_cols=69 Identities=16% Similarity=0.279 Sum_probs=42.8
Q ss_pred ccccCCcCeEEeccc-----CccEEEEEEEEEcCCCC--eeEEEEEeCCCCceEEEecC-------eE-EEcCCCcEEEE
Q 006581 530 FLVNLNLPSITIPEL-----KKSITVSRQVTNVSPMN--SVYTARVQAPAGTTVRVEPS-------TL-TFNSTRKKLKF 594 (639)
Q Consensus 530 ~~~~ln~ps~~~~~~-----~~~~~~~~tvtn~~~~~--~ty~~~~~~~~g~~v~v~p~-------~~-~~~~~g~~~~~ 594 (639)
+..=|.|.+|...++ .+..+++++|||+|+.. ++-++-+..|.+- +. .|. .+ .+ ++||++++
T Consensus 594 FG~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~-~~-~P~k~L~gF~kv~~L-~pGes~~V 670 (721)
T 2x41_A 594 FGYGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGK-ID-KPFQELKAFHKTRLL-NPGESEEV 670 (721)
T ss_dssp TTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSS-SC-CCSCEEEEEEECCCB-CTTCEEEE
T ss_pred cCCCCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCC-CC-CchHHhhcccccccC-CCCCeEEE
Confidence 344567777765543 24688999999999744 4555555555431 11 121 12 22 68999999
Q ss_pred EEEEEEe
Q 006581 595 KVTFYSR 601 (639)
Q Consensus 595 ~v~~~~~ 601 (639)
++++...
T Consensus 671 ~~~l~~~ 677 (721)
T 2x41_A 671 VLEIPVR 677 (721)
T ss_dssp EEEEEGG
T ss_pred EEEECHH
Confidence 9999864
No 64
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=49.89 E-value=1.1e+02 Score=29.46 Aligned_cols=55 Identities=13% Similarity=0.180 Sum_probs=38.2
Q ss_pred ccEEEEEEEEEcCCCCeeEEEEEeCC------C--CceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006581 546 KSITVSRQVTNVSPMNSVYTARVQAP------A--GTTVRVEPSTLTFNSTRKKLKFKVTFYSR 601 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~~~~~~------~--g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 601 (639)
+...++++|+|.++.+.-..+-++.. + ...+.++|..+.+ ++|+++.++|.....
T Consensus 42 ~~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 42 SEREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKA 104 (257)
T ss_dssp TCSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCC
T ss_pred CCcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCC
Confidence 45667899999986544333334421 1 2358899999999 579999999976543
No 65
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=49.26 E-value=42 Score=29.68 Aligned_cols=53 Identities=21% Similarity=0.219 Sum_probs=42.4
Q ss_pred ccEEEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006581 546 KSITVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSR 601 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 601 (639)
...+-.++|+|.++...-|.+...+|. ...|.|..=.+ .+|++.++.|+++..
T Consensus 35 ~~~~~~l~L~N~s~~~VaFKVKTT~p~--~y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 35 GEKKTLIVLTNVTKNIVAFKVRTTAPE--KYRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp SCCCEEEEEEBCSSSCEEEEEEESCTT--TEEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred ceEEEEEEEEcCCCCeEEEEEECCCCC--ceeecCCCcEE-CCCCeEEEEEEecCc
Confidence 344567899999999999999988886 45567887666 689999999999753
No 66
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=46.67 E-value=1.2e+02 Score=34.80 Aligned_cols=67 Identities=15% Similarity=0.252 Sum_probs=41.7
Q ss_pred ccccCCcCeEEec--cc---CccEEEEEEEEEcC-CCCee--EEEEEeCCCCceEEEecC-------eEEEcCCCcEEEE
Q 006581 530 FLVNLNLPSITIP--EL---KKSITVSRQVTNVS-PMNSV--YTARVQAPAGTTVRVEPS-------TLTFNSTRKKLKF 594 (639)
Q Consensus 530 ~~~~ln~ps~~~~--~~---~~~~~~~~tvtn~~-~~~~t--y~~~~~~~~g~~v~v~p~-------~~~~~~~g~~~~~ 594 (639)
+..=|.|.+|... ++ .+..+++++|||.| +.... -++-+..|.+. +. .|. .+.+ ++||++++
T Consensus 714 FG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~-~~-~P~k~L~gF~kv~L-~pGes~~V 790 (845)
T 3abz_A 714 FGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSK-VS-RPVKELKGFEKVHL-EPGEKKTV 790 (845)
T ss_dssp TTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCS-SC-CCSCEEEEEEEEEE-CTTCEEEE
T ss_pred ccCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCC-cc-hhhheeccceeEEE-CCCCEEEE
Confidence 3455777777766 44 35688999999999 65543 33444444321 10 121 2234 68999999
Q ss_pred EEEEE
Q 006581 595 KVTFY 599 (639)
Q Consensus 595 ~v~~~ 599 (639)
++++.
T Consensus 791 ~~~l~ 795 (845)
T 3abz_A 791 NIDLE 795 (845)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 99998
No 67
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=44.15 E-value=13 Score=27.29 Aligned_cols=34 Identities=12% Similarity=0.145 Sum_probs=26.2
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCcc
Q 006581 419 SCPHISGIVALLKAIHPTWSPAAIKSAIVTTASL 452 (639)
Q Consensus 419 AaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~ 452 (639)
..|..--....|++.||+++...|+.+|...=..
T Consensus 5 ~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gd 38 (59)
T 1wgl_A 5 SSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGN 38 (59)
T ss_dssp SSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTC
T ss_pred CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCC
Confidence 3344445677899999999999999999876543
No 68
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=42.94 E-value=49 Score=29.00 Aligned_cols=53 Identities=15% Similarity=0.201 Sum_probs=42.2
Q ss_pred ccEEEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006581 546 KSITVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSR 601 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 601 (639)
...+-.++|+|.++...-|.+...+|.- ..|.|..=.+ .++++..+.|+++..
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 4556678999999999999999888864 5567877555 689999999999864
No 69
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=41.50 E-value=2.2e+02 Score=26.51 Aligned_cols=54 Identities=9% Similarity=0.099 Sum_probs=37.5
Q ss_pred ccEEEEEEEEEcCCC-CeeEEEEEeCCC-----CceEEEecCeEEEcCCCcEEEEEEEEEE
Q 006581 546 KSITVSRQVTNVSPM-NSVYTARVQAPA-----GTTVRVEPSTLTFNSTRKKLKFKVTFYS 600 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~-~~ty~~~~~~~~-----g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 600 (639)
+...++++|+|.++. +.--.+-++... ...+.++|..+.+ ++|+++.++|....
T Consensus 14 ~~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~ 73 (218)
T 2xg5_A 14 SEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL-EPGAKSMVRLSTTP 73 (218)
T ss_dssp TSSEEEEEEEECCSSSCEEEEEEEECTTSCEECSSSEEEECSEEEE-CTTCEEEEEEEECG
T ss_pred CCCEEEEEEEcCCCCCcEEEEEEEecCCCCccccCCEEEcCCeEEE-CCCCceEEEEEecC
Confidence 456777999999865 444444444322 2347899999999 57999999998764
No 70
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=38.99 E-value=2.6e+02 Score=26.53 Aligned_cols=60 Identities=10% Similarity=0.063 Sum_probs=38.6
Q ss_pred ccEEEEEEEEEcCCCCeeEEEEEeCC---CCceEEEecCeEEEcCCCcEEEEEEEEEEeecCCC
Q 006581 546 KSITVSRQVTNVSPMNSVYTARVQAP---AGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQG 606 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~~~~~~---~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~ 606 (639)
+...++++|+|.++.+.--.+-++.. ....+.++|..+.+ .+|+++.++|.......+.+
T Consensus 36 ~~k~~sl~l~N~~~~P~LvQsWv~~~~~~~~~pfivtPPlfRl-ep~~~q~lRIi~~~~~LP~D 98 (239)
T 4djm_A 36 ASSGETLTVINDQDYPMLVQSEVLSEDQKSPAPFVVTPPLFRL-DGQQSSRLRIVRTGGEFPPD 98 (239)
T ss_dssp TSSCEEEEEEECSSSCEEEEEEEECTTSSSBCSEEEESSEEEE-CTTEEEEEEEEECSCCCCSS
T ss_pred CCCEEEEEEEeCCCCcEEEEEEEEcCCCCccCCEEEcCCeEEE-CCCCceEEEEEECCCCCCCC
Confidence 35667789999886543333333321 12458899999999 57999999997653323343
No 71
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=38.50 E-value=1.8e+02 Score=24.43 Aligned_cols=63 Identities=10% Similarity=0.061 Sum_probs=34.8
Q ss_pred CCcCeEEecccCccEEEEEEEEEcCCCCeeEEEEE-----eCCCCceEEEecCeEEEcCCCc-EEEEEEEEE
Q 006581 534 LNLPSITIPELKKSITVSRQVTNVSPMNSVYTARV-----QAPAGTTVRVEPSTLTFNSTRK-KLKFKVTFY 599 (639)
Q Consensus 534 ln~ps~~~~~~~~~~~~~~tvtn~~~~~~ty~~~~-----~~~~g~~v~v~p~~~~~~~~g~-~~~~~v~~~ 599 (639)
+..+++.+.+-.+. ++++|+-.+....+.+|.+ .+.+|........+|+|. +|| +++|+|.+-
T Consensus 10 F~~~~y~V~E~~g~--~~v~V~R~gg~~g~v~V~y~T~dgTA~ag~Dy~~~~g~l~F~-~Get~k~i~V~I~ 78 (123)
T 3fso_A 10 FEQPEFSVSRGDQV--ARIPVIRRVLDGGKSQVSYRTQDGTAQGNRDYIPVEGELLFQ-PGEAWKELQVKLL 78 (123)
T ss_dssp ESCSEEEEEGGGSE--EEEEEEEESCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEEC-TTCCEEEEEEEBC
T ss_pred EeCCEEEEEcCceE--EEEEEEEeCCCCceEEEEEEeeCCcEeCCccccccceEEEEC-CCCeEEEEEEEEE
Confidence 44567777765454 4455554444333333333 245566665566789995 566 466555554
No 72
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=37.34 E-value=1.9e+02 Score=25.59 Aligned_cols=64 Identities=13% Similarity=0.139 Sum_probs=34.8
Q ss_pred cCCcCeEEecccCccEEEEEEEEEc-CCCCeeEEEEE-----eCCCCceEEEecCeEEEcCCCc-EEEEEEEEE
Q 006581 533 NLNLPSITIPELKKSITVSRQVTNV-SPMNSVYTARV-----QAPAGTTVRVEPSTLTFNSTRK-KLKFKVTFY 599 (639)
Q Consensus 533 ~ln~ps~~~~~~~~~~~~~~tvtn~-~~~~~ty~~~~-----~~~~g~~v~v~p~~~~~~~~g~-~~~~~v~~~ 599 (639)
.+..+++.+.+-.+. ++++|+.. |....+.+|.+ .+-+|......+.+|+|. +|| +++++|.+.
T Consensus 26 ~F~~~~y~V~E~~G~--v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~-~Get~k~i~V~Ii 96 (160)
T 3gin_A 26 FFEQGTYQCLENCGT--VALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFK-PGETQKEIRVGII 96 (160)
T ss_dssp EESCSEEEEETTSSE--EEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBCCCEEEEEEC-TTCCEEEEEEEBC
T ss_pred EEeCCEEEEEcCcEE--EEEEEEEccCCCCcEEEEEEEEECCcccCCCCccccceEEEEc-CCcEEEEEEEEEE
Confidence 355567777765554 44555444 33222323322 344566665567789995 565 456655554
No 73
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=37.04 E-value=2.1e+02 Score=26.92 Aligned_cols=60 Identities=15% Similarity=0.169 Sum_probs=37.1
Q ss_pred ccEEEEEEEEEcCCCCeeEEE--EEeC--C--CCceEEEecCeEEEcCCCcEEEEEEEEEEeecCCCc
Q 006581 546 KSITVSRQVTNVSPMNSVYTA--RVQA--P--AGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQGR 607 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~--~~~~--~--~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~ 607 (639)
+...++++|+|.++.. .|-+ -++. . ....+.++|..+.+ .+|+++.++|.......+.+.
T Consensus 14 ~~k~~sl~l~N~~~~~-p~LvQsWid~~~~~~~~~pfivtPPlfRl-ep~~~q~lRIi~~~~~LP~DR 79 (224)
T 3gfu_C 14 DKDALTITVTNNDKER-TFGGQAWVDNIVEKDTRPTFVVTPSFFKV-KPNGQQTLRIIMASDHLPKDK 79 (224)
T ss_dssp TSSCEEEEEEECCSSC-CEEEEEEEEESSCCSCSCSEEEESSEEEE-CTTCEEEEEEEECSCCCCSSS
T ss_pred CCceEEEEEEeCCCCc-cEEEEEEEecCCCCcccCCEEEcCCeEEE-CCCCceEEEEEECCCCCCCCc
Confidence 3456678999988542 2322 2221 1 12348899999999 578999999976533334333
No 74
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=34.59 E-value=2.9e+02 Score=25.78 Aligned_cols=91 Identities=9% Similarity=0.082 Sum_probs=52.1
Q ss_pred ccEEEEEEEEEcCCCCeeEEEEEeC---CCCceEEEecCeEEEcCCCcEEEEEEEEEEeecCCCceEEEEEEEEc---C-
Q 006581 546 KSITVSRQVTNVSPMNSVYTARVQA---PAGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQGRYSFGNLFWED---G- 618 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ty~~~~~~---~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~~~---~- 618 (639)
+...++++|+|.++.+.--.+-++. -....+.++|..+.+ ++++++.++|.......+.+...-=+|.+.+ .
T Consensus 26 ~~k~~sl~l~N~~~~p~LvQsWv~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~~~lP~DrEslf~lnv~eIPp~~ 104 (221)
T 2co7_B 26 GTAGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPLFRL-EANQQSQLRIVRTGGDMPTDRETLQWVCIKAVPPEN 104 (221)
T ss_dssp TSSCEEEEEECCSSSCEEEEEEEEETTSSSBCSEEEESSEEEE-CTTCEEEEEEEECCCCCCSSSCEEEEEEEEEECCC-
T ss_pred CCCEEEEEEEcCCCCcEEEEEEEecCCCCccCCEEEeCCEEEE-CCCCceEEEEEECCCCCCCCceEEEEEEeecCCCCc
Confidence 3466678889988654333333332 123458899999999 5799999999876433344333211333322 1
Q ss_pred -c-----eE--EEEeEEEEeEeechhc
Q 006581 619 -I-----HV--VRIPLIVRTIIDEFYA 637 (639)
Q Consensus 619 -~-----~~--v~~P~~~~~~~~~~~~ 637 (639)
. .. ..+=++++.+|+=||.
T Consensus 105 ~~~~~~~~n~~~~lqia~r~rIKlFyR 131 (221)
T 2co7_B 105 EPSDTQAKGATLDLNLSINACDKLIFR 131 (221)
T ss_dssp ----------CEEEEEEEEEEEEEEEE
T ss_pred ccccccccCcceeEEEEeeeeeeEEEe
Confidence 0 11 2566666776766653
No 75
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=30.91 E-value=36 Score=30.26 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=26.6
Q ss_pred eeccccchhHHHHHHHHHHHhhCCCCCHHHHHH
Q 006581 412 VESGTSMSCPHISGIVALLKAIHPTWSPAAIKS 444 (639)
Q Consensus 412 ~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~ 444 (639)
.+.|-| =|++|-|.+|||++.+-..+|+||.+
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 344555 47999999999999999999999875
No 76
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=30.09 E-value=71 Score=25.89 Aligned_cols=17 Identities=18% Similarity=-0.054 Sum_probs=13.3
Q ss_pred ccEEEEEEEEEcCCCCe
Q 006581 546 KSITVSRQVTNVSPMNS 562 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ 562 (639)
+..+++++|+|.|+.+-
T Consensus 18 gr~~~~l~V~NtGDRPI 34 (101)
T 4ep8_B 18 GRATCRVVVENHGDRPI 34 (101)
T ss_dssp TCCEEEEEEEECSSSCE
T ss_pred CCCEEEEEEEeCCCcce
Confidence 56778899999997653
No 77
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=28.34 E-value=2.4e+02 Score=22.92 Aligned_cols=64 Identities=11% Similarity=0.051 Sum_probs=42.8
Q ss_pred eEEecccCccEEEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEc-CCCcEEEEEEEEEEeecCCCceEEEEEE
Q 006581 538 SITIPELKKSITVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFN-STRKKLKFKVTFYSRLRVQGRYSFGNLF 614 (639)
Q Consensus 538 s~~~~~~~~~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~-~~g~~~~~~v~~~~~~~~~~~~~~G~i~ 614 (639)
.+.|........+++|++|...+...|.-....|. .+++. ...++-++.|.+.. ...++.|...
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~---------~i~IdLnge~sG~Y~IeI~~----~~~~LtG~F~ 99 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTS---------IVMIDMSSCEKGEYTIHIIL----NDCLLEGTFT 99 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCS---------EEEEECTTSCSEEEEEEEEE----TTEEEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCc---------EEEEEcCCCcCceEEEEEEe----CCcEEEEEEE
Confidence 55665555667788999999878888988776543 22332 23346678888774 4557777654
No 78
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=27.78 E-value=1.7e+02 Score=24.36 Aligned_cols=25 Identities=8% Similarity=0.170 Sum_probs=18.1
Q ss_pred CccEEEEEEEEEcCCC-CeeEEEEEe
Q 006581 545 KKSITVSRQVTNVSPM-NSVYTARVQ 569 (639)
Q Consensus 545 ~~~~~~~~tvtn~~~~-~~ty~~~~~ 569 (639)
+...+++.+|+|.|.. ...+.+.+.
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEE
Confidence 4578999999999964 345666654
No 79
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=27.71 E-value=4.6e+02 Score=26.77 Aligned_cols=85 Identities=18% Similarity=0.206 Sum_probs=46.9
Q ss_pred CccEEEEEEEEEcCCCCee---EE---EEEeC----------C------CCceEEEecCeEEEcCCCcEEEEEEEEEEee
Q 006581 545 KKSITVSRQVTNVSPMNSV---YT---ARVQA----------P------AGTTVRVEPSTLTFNSTRKKLKFKVTFYSRL 602 (639)
Q Consensus 545 ~~~~~~~~tvtn~~~~~~t---y~---~~~~~----------~------~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~ 602 (639)
.++.+++++|||.|+.+.. |+ +.... | .| ++ +|. -+ .+||+++++|+++-..
T Consensus 297 gR~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI-~PGETrt~~V~a~da~ 370 (419)
T 3rfr_A 297 GRELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VI-APGESKEIVVKIQDAR 370 (419)
T ss_dssp SSEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CB-CTTCEEEEEEEEECHH
T ss_pred CcEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--Cc-CCCcceEEEEEeehHH
Confidence 3688899999999987642 22 11111 1 13 33 555 34 6899999998887321
Q ss_pred ----cC------CCceEEEEEEEEcC-ceEEEEeEEEEeEeechh
Q 006581 603 ----RV------QGRYSFGNLFWEDG-IHVVRIPLIVRTIIDEFY 636 (639)
Q Consensus 603 ----~~------~~~~~~G~i~~~~~-~~~v~~P~~~~~~~~~~~ 636 (639)
.. ...-.-|-|.|.|. .+..-+.+.-. .|-.|.
T Consensus 371 WeveRL~~l~~D~dSrfgGLLfF~d~~G~r~i~~I~~p-vIP~F~ 414 (419)
T 3rfr_A 371 WDIERLSDLAYDTDSQVGGLLFFFTPDGKRFAAEIGGP-VIPKFV 414 (419)
T ss_dssp HHHTTGGGGGGSSSCEEEEEEEEECSSSCEEEEEEEEE-CEEEC-
T ss_pred HHHHHHhhhhcCchhheeEEEEEEcCCCCEEEEeccCc-ccceec
Confidence 11 12234555666663 45554444432 344454
No 80
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=26.25 E-value=35 Score=29.81 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=27.7
Q ss_pred eeeccccchhHHHHHHHHHHHhhCCCCCHHHHHH
Q 006581 411 KVESGTSMSCPHISGIVALLKAIHPTWSPAAIKS 444 (639)
Q Consensus 411 ~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~ 444 (639)
..+.|-| =|++|-|.+|||.+.+-..+|+||.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4555666 47999999999999999999999864
No 81
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=24.81 E-value=65 Score=25.74 Aligned_cols=28 Identities=14% Similarity=0.221 Sum_probs=20.1
Q ss_pred eEEEecCeEEEcCCCcEEEEEEEEEEeec
Q 006581 575 TVRVEPSTLTFNSTRKKLKFKVTFYSRLR 603 (639)
Q Consensus 575 ~v~v~p~~~~~~~~g~~~~~~v~~~~~~~ 603 (639)
.+++.|..+++ ..|++.++++++.+..+
T Consensus 8 ~i~l~~~~~~l-~vG~t~~L~atv~P~~A 35 (91)
T 2l04_A 8 GMTVTPASTSV-VKGQSTTLTVAFQPEGV 35 (91)
T ss_dssp CEEEECCCEEE-ETTCEEEEEEEECCSSC
T ss_pred EEEEeCCceEE-EcCCEEEEEEEEecccc
Confidence 35667888877 46888888888875443
No 82
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=24.49 E-value=2.1e+02 Score=28.90 Aligned_cols=54 Identities=13% Similarity=0.146 Sum_probs=32.2
Q ss_pred CccEEEEEEEEEcCCCCee---EE-EE--EeC----------CC----CceEEEecCeEEEcCCCcEEEEEEEEEE
Q 006581 545 KKSITVSRQVTNVSPMNSV---YT-AR--VQA----------PA----GTTVRVEPSTLTFNSTRKKLKFKVTFYS 600 (639)
Q Consensus 545 ~~~~~~~~tvtn~~~~~~t---y~-~~--~~~----------~~----g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 600 (639)
.++.+++++|||.|+.+.. |+ .. .-. |. +--++|+|.+- + ++||+++++|+++-
T Consensus 263 gR~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~p-I-~PGETr~~~v~a~d 336 (382)
T 1yew_A 263 GRAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSP-L-APGETRTVDVTASD 336 (382)
T ss_dssp CSEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSC-B-CTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCC-c-CCCceeEEEEEeeh
Confidence 3678899999999976532 22 11 111 11 11234455541 2 58999999988874
No 83
>2qvk_A CBD2, sodium/calcium exchanger 1; calcium binding domain, metal binding protein; 1.45A {Canis lupus familiaris} PDB: 2qvm_A 2fwu_A 2kls_A
Probab=24.35 E-value=2.6e+02 Score=25.54 Aligned_cols=63 Identities=14% Similarity=0.121 Sum_probs=36.1
Q ss_pred CCcCeEEecccCccEEEEEEEEEcCCCCeeEEEEEe-----CCC-CceEEEecCeEEEcCCCcE-EEEEEEEE
Q 006581 534 LNLPSITIPELKKSITVSRQVTNVSPMNSVYTARVQ-----APA-GTTVRVEPSTLTFNSTRKK-LKFKVTFY 599 (639)
Q Consensus 534 ln~ps~~~~~~~~~~~~~~tvtn~~~~~~ty~~~~~-----~~~-g~~v~v~p~~~~~~~~g~~-~~~~v~~~ 599 (639)
+..+++.+.+-.+..+ ++|+-.|....+.+|.+. +-+ |........+|+|. +||+ ++|+|.+-
T Consensus 10 F~~~~y~V~E~~G~v~--vtV~R~gg~~g~VsV~y~T~dGTA~agG~DY~~~sGtL~F~-~GEt~KtI~I~Ii 79 (192)
T 2qvk_A 10 FEEPVTHVSESIGIME--VKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQ-NDEIVKTISVKVI 79 (192)
T ss_dssp ESCSEEEEETTCCEEE--EEEEEESCCCSCEEEEEEEEESSSCTTTTSBCCCEEEEEEC-TTCCEEEEEEEBC
T ss_pred EcCCeEEEEcCceEEE--EEEEEeCCCCceEEEEEEeeCCceeccCcCccccceEEEEC-CCCeEEEEEEEEe
Confidence 3446777776555444 555555544444444432 455 56665556788995 5665 66666654
No 84
>3lyw_A YBBR family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.90A {Desulfitobacterium hafniense} PDB: 2kpu_A 2l5n_A
Probab=24.26 E-value=48 Score=26.54 Aligned_cols=38 Identities=16% Similarity=0.324 Sum_probs=26.9
Q ss_pred EEEEEEEEEcCCCCeeEEEEEeCCCCce-EEEecCeEEE
Q 006581 548 ITVSRQVTNVSPMNSVYTARVQAPAGTT-VRVEPSTLTF 585 (639)
Q Consensus 548 ~~~~~tvtn~~~~~~ty~~~~~~~~g~~-v~v~p~~~~~ 585 (639)
....+-|+++..+..+|.+.+..|.|+. +.++|..+++
T Consensus 43 i~A~VDLsg~~~G~~~~~V~v~~P~G~~lv~vsP~~V~~ 81 (90)
T 3lyw_A 43 LFAYVDLSGSEPGEHDYEVKVEPIPNIKIVEISPRVVTL 81 (90)
T ss_dssp CEEEEECTTCCSEEEEEECEECCCTTEEEEEEESSEEEE
T ss_pred EEEEEECcCCCCCcEeEEEEEECCCCCEEEEEccceEEE
Confidence 3444556666666677888888999977 5688887765
No 85
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=22.87 E-value=96 Score=26.22 Aligned_cols=17 Identities=12% Similarity=0.016 Sum_probs=13.3
Q ss_pred ccEEEEEEEEEcCCCCe
Q 006581 546 KSITVSRQVTNVSPMNS 562 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ 562 (639)
+..+++++|+|.|+.+.
T Consensus 24 gr~~~~l~V~NtGDRPI 40 (126)
T 4ac7_B 24 GREKTTIRVSNTGDRPI 40 (126)
T ss_dssp TSCEEEEEEEECSSSCE
T ss_pred CCcEEEEEEEeCCCCCE
Confidence 46778899999997653
No 86
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=22.87 E-value=96 Score=26.22 Aligned_cols=17 Identities=12% Similarity=0.016 Sum_probs=13.3
Q ss_pred ccEEEEEEEEEcCCCCe
Q 006581 546 KSITVSRQVTNVSPMNS 562 (639)
Q Consensus 546 ~~~~~~~tvtn~~~~~~ 562 (639)
+..+++++|+|.|+.+.
T Consensus 24 gr~~~~l~V~NtGDRPI 40 (126)
T 4ubp_B 24 GREKTTIRVSNTGDRPI 40 (126)
T ss_dssp TSCEEEEEEEECSSSCE
T ss_pred CCcEEEEEEEeCCCCCE
Confidence 46778899999997653
No 87
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=21.38 E-value=84 Score=21.97 Aligned_cols=26 Identities=12% Similarity=0.323 Sum_probs=21.8
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhcCc
Q 006581 426 IVALLKAIHPTWSPAAIKSAIVTTAS 451 (639)
Q Consensus 426 ~aALl~q~~p~ls~~~vk~~L~~TA~ 451 (639)
-+.+|.+.||+.+..+||..|...=-
T Consensus 7 ~v~~L~EMFP~~~~~~ik~~L~~~~G 32 (49)
T 1otr_A 7 KLSILMDMFPAISKSKLQVHLLENNN 32 (49)
T ss_dssp HHHHHHHHCSSSCHHHHHHHHHHTTT
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 35688999999999999999987543
No 88
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=21.35 E-value=3.4e+02 Score=26.60 Aligned_cols=64 Identities=14% Similarity=0.114 Sum_probs=35.8
Q ss_pred CCcCeEEecccCccEEEEEEEEEcCCCCeeEEEEE-----eCCCC-ceEEEecCeEEEcCCCcE-EEEEEEEEE
Q 006581 534 LNLPSITIPELKKSITVSRQVTNVSPMNSVYTARV-----QAPAG-TTVRVEPSTLTFNSTRKK-LKFKVTFYS 600 (639)
Q Consensus 534 ln~ps~~~~~~~~~~~~~~tvtn~~~~~~ty~~~~-----~~~~g-~~v~v~p~~~~~~~~g~~-~~~~v~~~~ 600 (639)
+..+.+.+.+-.+..+ ++|+..+......++.+ .+.+| ........+|+|. +||+ ++|+|.+.-
T Consensus 145 f~~~~~~V~E~~G~~~--v~V~Rs~~~~g~VtV~y~T~~GTA~~g~~DY~~~sgtLtF~-~Get~kti~V~Iid 215 (295)
T 3us9_A 145 FEEPVTHVSESIGIME--VKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQ-NDEIVKTISVKVID 215 (295)
T ss_dssp ESCSEEEEESCSSEEE--EEEEEESCCCSCEEEEEEEECCSSCTTTTSEECCEEEEEEC-TTCCCEEEEEEECC
T ss_pred cCCCeEEEecCCCeEE--EEEEEEcCCCccEEEEEEecCCCccCCcccccccceEEEec-CCceEEEEEEEEcC
Confidence 4445666666545444 44444444333333333 24556 6676667789995 5664 666666653
Done!