Query 006586
Match_columns 639
No_of_seqs 481 out of 1918
Neff 5.9
Searched_HMMs 46136
Date Thu Mar 28 11:34:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006586.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006586hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1737 Oxysterol-binding prot 100.0 2.1E-87 4.5E-92 758.7 29.9 537 82-639 67-643 (799)
2 KOG2209 Oxysterol-binding prot 100.0 3.2E-70 6.9E-75 554.3 11.1 224 412-638 26-253 (445)
3 PF01237 Oxysterol_BP: Oxyster 100.0 1.3E-62 2.8E-67 527.7 14.7 207 429-639 1-209 (354)
4 KOG2210 Oxysterol-binding prot 100.0 2.8E-46 6E-51 397.9 11.9 211 425-638 32-253 (392)
5 cd01247 PH_GPBP Goodpasture an 99.9 7.8E-24 1.7E-28 185.6 12.0 89 95-221 1-90 (91)
6 cd01265 PH_PARIS-1 PARIS-1 ple 99.8 3.6E-21 7.8E-26 169.9 10.5 89 95-223 1-94 (95)
7 PF15413 PH_11: Pleckstrin hom 99.8 1E-20 2.2E-25 172.0 8.5 110 95-222 1-112 (112)
8 cd01251 PH_centaurin_alpha Cen 99.8 1.2E-19 2.6E-24 162.5 11.2 90 95-224 1-101 (103)
9 cd01233 Unc104 Unc-104 pleckst 99.8 2.6E-19 5.6E-24 159.4 12.0 90 94-223 3-98 (100)
10 cd01264 PH_melted Melted pleck 99.8 3.1E-19 6.7E-24 159.1 11.0 89 95-222 2-100 (101)
11 cd01235 PH_SETbf Set binding f 99.8 2.5E-18 5.5E-23 151.8 11.4 89 95-223 1-101 (101)
12 cd01238 PH_Tec Tec pleckstrin 99.8 2E-18 4.3E-23 155.5 10.7 91 94-222 1-106 (106)
13 cd01246 PH_oxysterol_bp Oxyste 99.8 7.4E-18 1.6E-22 145.0 11.7 90 95-222 1-91 (91)
14 PF15409 PH_8: Pleckstrin homo 99.7 7E-18 1.5E-22 146.7 9.6 86 97-223 1-89 (89)
15 cd01260 PH_CNK Connector enhan 99.7 1.4E-17 3E-22 146.5 11.0 88 95-222 2-96 (96)
16 cd01236 PH_outspread Outspread 99.7 1.3E-17 2.9E-22 149.6 10.8 88 95-221 1-102 (104)
17 cd01252 PH_cytohesin Cytohesin 99.7 8.1E-17 1.8E-21 148.8 12.7 92 95-226 2-116 (125)
18 cd01257 PH_IRS Insulin recepto 99.7 1.3E-16 2.8E-21 142.6 11.9 90 93-221 2-100 (101)
19 cd01266 PH_Gab Gab (Grb2-assoc 99.7 1.1E-16 2.3E-21 144.5 10.5 88 95-222 1-107 (108)
20 cd01250 PH_centaurin Centaurin 99.7 3.8E-16 8.2E-21 135.1 10.5 90 95-222 1-94 (94)
21 cd01241 PH_Akt Akt pleckstrin 99.6 2.1E-15 4.6E-20 134.9 11.6 92 94-222 2-101 (102)
22 PF00169 PH: PH domain; Inter 99.6 1.6E-14 3.4E-19 124.8 12.7 93 94-223 2-103 (104)
23 cd01245 PH_RasGAP_CG5898 RAS G 99.6 3.1E-15 6.6E-20 132.9 8.3 85 96-221 2-97 (98)
24 cd01244 PH_RasGAP_CG9209 RAS_G 99.6 1.1E-14 2.4E-19 129.5 10.4 85 97-222 5-98 (98)
25 cd01219 PH_FGD FGD (faciogenit 99.5 1.9E-13 4E-18 122.1 12.0 96 94-224 3-100 (101)
26 cd01263 PH_anillin Anillin Ple 99.5 1.7E-13 3.8E-18 126.3 9.6 92 94-222 2-122 (122)
27 cd01237 Unc112 Unc-112 pleckst 99.5 2.9E-13 6.3E-18 121.1 9.6 81 105-223 16-103 (106)
28 KOG0930 Guanine nucleotide exc 99.4 5.8E-13 1.3E-17 135.3 9.8 96 92-227 259-379 (395)
29 cd01254 PH_PLD Phospholipase D 99.4 2.2E-12 4.8E-17 119.0 9.8 88 95-222 1-121 (121)
30 smart00233 PH Pleckstrin homol 99.4 7.9E-12 1.7E-16 105.8 12.5 93 94-223 2-101 (102)
31 cd01253 PH_beta_spectrin Beta- 99.3 1.7E-11 3.7E-16 109.3 10.3 90 95-222 1-104 (104)
32 cd01220 PH_CDEP Chondrocyte-de 99.2 8.2E-11 1.8E-15 105.0 11.7 93 94-224 3-98 (99)
33 cd00821 PH Pleckstrin homology 99.2 4.2E-11 9.1E-16 100.5 9.2 91 95-222 1-96 (96)
34 KOG1739 Serine/threonine prote 99.2 1.2E-11 2.7E-16 133.3 5.6 93 94-224 25-117 (611)
35 cd00900 PH-like Pleckstrin hom 99.1 8.5E-10 1.8E-14 93.2 11.3 87 96-222 2-99 (99)
36 KOG1090 Predicted dual-specifi 99.1 5.6E-11 1.2E-15 135.9 2.7 90 94-223 1635-1731(1732)
37 KOG0690 Serine/threonine prote 98.9 1.4E-09 3.1E-14 113.8 6.2 99 93-228 15-121 (516)
38 cd01230 PH_EFA6 EFA6 Pleckstri 98.9 1.2E-08 2.6E-13 93.7 11.5 99 95-226 2-114 (117)
39 PF14593 PH_3: PH domain; PDB: 98.8 1.5E-08 3.2E-13 91.2 9.0 88 93-226 13-102 (104)
40 cd01256 PH_dynamin Dynamin ple 98.8 2.5E-08 5.3E-13 87.8 9.7 89 94-222 2-104 (110)
41 cd01218 PH_phafin2 Phafin2 Pl 98.8 4.7E-08 1E-12 88.0 11.7 94 94-226 5-101 (104)
42 cd01249 PH_oligophrenin Oligop 98.6 1.4E-07 3E-12 84.6 8.8 47 174-220 52-102 (104)
43 cd01234 PH_CADPS CADPS (Ca2+-d 98.6 7.1E-08 1.5E-12 85.6 6.4 88 95-224 4-111 (117)
44 PF15410 PH_9: Pleckstrin homo 98.6 6.1E-07 1.3E-11 82.6 11.2 103 95-223 2-118 (119)
45 KOG0521 Putative GTPase activa 98.5 5.3E-08 1.2E-12 114.3 3.0 98 91-228 272-373 (785)
46 cd01243 PH_MRCK MRCK (myotonic 98.5 1.7E-06 3.8E-11 79.1 11.4 99 92-224 1-120 (122)
47 cd01242 PH_ROK Rok (Rho- assoc 98.3 3.7E-06 8E-11 75.9 10.1 92 95-223 2-110 (112)
48 cd01261 PH_SOS Son of Sevenles 98.2 1.1E-05 2.3E-10 73.8 11.3 102 94-224 5-110 (112)
49 cd01239 PH_PKD Protein kinase 98.2 1.1E-05 2.4E-10 73.4 9.3 88 95-222 2-117 (117)
50 cd01262 PH_PDK1 3-Phosphoinosi 98.1 1.1E-05 2.3E-10 70.5 7.6 86 94-223 2-88 (89)
51 cd01259 PH_Apbb1ip Apbb1ip (Am 98.1 7.3E-06 1.6E-10 74.2 6.8 92 95-223 2-108 (114)
52 KOG3640 Actin binding protein 98.1 4.6E-06 9.9E-11 96.8 6.4 100 90-226 987-1109(1116)
53 KOG0248 Cytoplasmic protein Ma 98.0 2.2E-06 4.7E-11 96.5 3.0 95 94-226 250-344 (936)
54 PTZ00267 NIMA-related protein 97.7 6.1E-05 1.3E-09 84.5 7.9 96 94-224 378-477 (478)
55 PLN02866 phospholipase D 97.5 0.00051 1.1E-08 82.3 11.5 109 93-226 182-310 (1068)
56 KOG3723 PH domain protein Melt 97.5 4.4E-05 9.6E-10 84.8 2.3 98 92-228 734-841 (851)
57 PLN00188 enhanced disease resi 97.5 0.00043 9.3E-09 80.1 10.3 96 93-226 4-112 (719)
58 KOG0705 GTPase-activating prot 97.5 4.8E-05 1E-09 84.8 2.4 37 190-226 445-482 (749)
59 PF12814 Mcp5_PH: Meiotic cell 97.4 0.00097 2.1E-08 61.9 10.1 33 191-223 89-121 (123)
60 cd01258 PH_syntrophin Syntroph 97.3 0.00052 1.1E-08 62.3 6.9 90 97-221 3-107 (108)
61 KOG2059 Ras GTPase-activating 97.3 0.00038 8.2E-09 79.5 6.2 81 107-228 584-669 (800)
62 KOG3751 Growth factor receptor 97.3 0.00046 9.9E-09 76.5 6.6 98 90-224 314-425 (622)
63 cd01222 PH_clg Clg (common-sit 97.2 0.0043 9.4E-08 55.4 11.0 87 94-223 5-95 (97)
64 KOG1451 Oligophrenin-1 and rel 97.1 0.0015 3.3E-08 73.2 8.2 98 91-222 263-366 (812)
65 cd01224 PH_Collybistin Collybi 97.1 0.0072 1.6E-07 55.0 11.1 93 94-223 3-107 (109)
66 KOG0932 Guanine nucleotide exc 97.0 0.0031 6.8E-08 70.6 9.9 106 91-228 504-622 (774)
67 cd01221 PH_ephexin Ephexin Ple 96.9 0.0026 5.6E-08 59.3 7.3 79 109-220 27-119 (125)
68 PF15406 PH_6: Pleckstrin homo 96.8 0.0032 6.9E-08 56.9 6.2 51 170-221 61-111 (112)
69 PF15404 PH_4: Pleckstrin homo 96.4 0.021 4.5E-07 56.8 9.9 32 95-126 1-32 (185)
70 cd01240 PH_beta-ARK Beta adren 96.3 0.0036 7.9E-08 56.6 3.5 92 94-227 4-102 (116)
71 KOG4424 Predicted Rho/Rac guan 96.2 0.0073 1.6E-07 68.1 5.9 100 94-228 273-374 (623)
72 KOG1117 Rho- and Arf-GTPase ac 95.7 0.0043 9.3E-08 72.3 1.6 95 90-225 84-179 (1186)
73 KOG3543 Ca2+-dependent activat 95.5 0.0037 7.9E-08 70.6 0.2 92 94-226 465-568 (1218)
74 KOG1117 Rho- and Arf-GTPase ac 95.5 0.057 1.2E-06 63.4 9.5 89 94-222 493-600 (1186)
75 KOG3531 Rho guanine nucleotide 95.3 0.0073 1.6E-07 70.4 1.7 95 93-227 924-1023(1036)
76 PTZ00283 serine/threonine prot 95.3 0.041 9E-07 62.3 7.8 35 190-224 455-490 (496)
77 cd01232 PH_TRIO Trio pleckstri 95.0 0.34 7.5E-06 44.6 11.4 51 174-224 57-113 (114)
78 cd01226 PH_exo84 Exocyst compl 94.9 0.29 6.2E-06 44.1 10.1 51 174-224 46-99 (100)
79 KOG0248 Cytoplasmic protein Ma 94.6 0.01 2.2E-07 67.9 0.3 87 94-222 260-347 (936)
80 cd01228 PH_BCR-related BCR (br 94.3 0.27 5.8E-06 43.8 8.4 90 94-223 4-94 (96)
81 cd01248 PH_PLC Phospholipase C 94.1 0.28 6.2E-06 44.6 8.6 34 188-221 77-114 (115)
82 cd01225 PH_Cool_Pix Cool (clon 93.0 0.6 1.3E-05 42.7 8.5 79 107-222 26-108 (111)
83 KOG4807 F-actin binding protei 91.9 0.0023 5.1E-08 68.7 -9.7 80 108-224 34-115 (593)
84 cd01227 PH_Dbs Dbs (DBL's big 90.4 3.5 7.6E-05 39.1 10.9 52 174-225 63-117 (133)
85 PF15408 PH_7: Pleckstrin homo 89.8 0.15 3.2E-06 44.4 1.1 96 96-225 1-99 (104)
86 cd01223 PH_Vav Vav pleckstrin 87.3 4.8 0.0001 37.3 9.2 34 192-225 78-113 (116)
87 KOG0592 3-phosphoinositide-dep 84.9 2.1 4.6E-05 48.9 6.8 90 92-226 450-540 (604)
88 KOG1738 Membrane-associated gu 84.2 0.4 8.7E-06 55.1 0.9 37 91-127 560-599 (638)
89 KOG3551 Syntrophins (type beta 78.9 1.3 2.8E-05 48.4 2.3 93 94-221 293-399 (506)
90 KOG3727 Mitogen inducible gene 78.8 0.39 8.4E-06 54.5 -1.7 53 172-224 400-459 (664)
91 KOG1170 Diacylglycerol kinase 74.3 0.14 3E-06 60.0 -6.8 90 95-225 4-96 (1099)
92 PF15405 PH_5: Pleckstrin homo 74.2 4 8.6E-05 38.7 4.0 34 94-127 2-35 (135)
93 KOG3520 Predicted guanine nucl 72.0 3.3 7.2E-05 51.1 3.6 57 173-229 667-727 (1167)
94 KOG3531 Rho guanine nucleotide 71.6 2.9 6.2E-05 49.8 2.8 98 94-230 751-851 (1036)
95 PF09726 Macoilin: Transmembra 68.3 16 0.00035 43.7 8.1 73 245-317 441-520 (697)
96 KOG4236 Serine/threonine prote 65.2 15 0.00032 42.4 6.6 99 94-224 414-524 (888)
97 KOG4424 Predicted Rho/Rac guan 64.5 7.7 0.00017 44.6 4.3 92 94-225 498-597 (623)
98 KOG3523 Putative guanine nucle 56.0 16 0.00035 42.4 4.9 21 200-220 571-591 (695)
99 KOG3551 Syntrophins (type beta 55.0 15 0.00032 40.6 4.2 53 173-225 215-273 (506)
100 cd01231 PH_Lnk LNK-family Plec 54.0 68 0.0015 29.2 7.5 35 187-221 71-106 (107)
101 cd01255 PH_TIAM TIAM Pleckstri 52.9 82 0.0018 30.4 8.3 29 198-226 129-157 (160)
102 KOG3003 Molecular chaperone of 52.3 28 0.0006 36.0 5.5 40 503-554 180-220 (236)
103 PF08458 PH_2: Plant pleckstri 46.0 35 0.00075 31.4 4.5 35 191-225 71-105 (110)
104 PF09755 DUF2046: Uncharacteri 42.8 1E+02 0.0022 33.4 8.1 21 292-312 156-176 (310)
105 KOG1737 Oxysterol-binding prot 42.4 33 0.00071 41.5 4.8 57 171-229 117-174 (799)
106 KOG4047 Docking protein 1 (p62 41.0 14 0.0003 41.5 1.5 29 93-121 8-38 (429)
107 KOG2070 Guanine nucleotide exc 40.6 40 0.00087 38.4 4.8 48 174-221 353-404 (661)
108 cd05135 RasGAP_RASAL Ras GTPas 33.3 12 0.00027 40.7 -0.4 23 94-116 304-332 (333)
109 PF14254 DUF4348: Domain of un 32.8 57 0.0012 34.5 4.3 41 587-627 224-266 (273)
110 PF06785 UPF0242: Uncharacteri 32.7 1.3E+02 0.0028 32.9 6.9 49 266-314 108-156 (401)
111 cd05134 RasGAP_RASA3 RASA3 (or 27.8 16 0.00034 39.5 -0.8 26 93-118 280-310 (310)
112 cd05128 RasGAP_GAP1_like The G 27.7 16 0.00034 39.6 -0.8 24 93-116 286-314 (315)
113 cd05394 RasGAP_RASA2 RASA2 (or 27.3 13 0.00028 40.1 -1.5 26 93-118 283-313 (313)
114 PRK00846 hypothetical protein; 26.2 2.7E+02 0.0059 24.1 6.6 15 242-256 5-19 (77)
115 KOG0689 Guanine nucleotide exc 26.0 66 0.0014 36.5 3.6 38 187-224 320-361 (448)
116 PF10504 DUF2452: Protein of u 25.8 57 0.0012 31.9 2.7 25 506-530 85-109 (159)
117 KOG3915 Transcription regulato 25.7 1.8E+02 0.0038 33.2 6.7 42 276-317 547-588 (641)
118 KOG1264 Phospholipase C [Lipid 23.9 2.4E+02 0.0052 34.5 7.6 77 173-276 853-936 (1267)
119 PF15277 Sec3-PIP2_bind: Exocy 21.3 2.9E+02 0.0064 24.3 6.1 34 190-224 56-89 (91)
120 COG4026 Uncharacterized protei 21.2 3.2E+02 0.007 28.4 7.0 80 174-256 33-120 (290)
121 PF09340 NuA4: Histone acetylt 20.9 1.1E+02 0.0025 26.4 3.3 33 278-310 2-34 (80)
122 PF00170 bZIP_1: bZIP transcri 20.3 4.4E+02 0.0095 21.2 6.6 44 262-305 17-60 (64)
123 PLN03188 kinesin-12 family pro 20.1 5.2E+02 0.011 33.3 9.8 78 209-291 1050-1127(1320)
No 1
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-87 Score=758.68 Aligned_cols=537 Identities=34% Similarity=0.520 Sum_probs=412.5
Q ss_pred CccccccccCCCcEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhccc--c
Q 006586 82 PVDVKINDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKH--K 159 (639)
Q Consensus 82 ~~~~~~~~~~~~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~--~ 159 (639)
.....+.. .+..++|||+||++++++|++|||+|.+|.|+||++.++.+.++..+.....+.|+...-..++..+. +
T Consensus 67 ~~~~~~~~-~~~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~~q 145 (799)
T KOG1737|consen 67 TSEAGIKK-SGASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSFSKTTCGGGINLVTAWIQNGERMDICSVDGSCQ 145 (799)
T ss_pred cccccccc-ccccccceeeccccccCCcccceEEecCcceeeeccCCccccCCCCcccccccccccCCCcccchhhcccc
Confidence 33344445 67789999999999999999999999999999999999988887666666667777543322222221 1
Q ss_pred cccc--hhcccCCCCceeEEcc-ceEEEecCCCCCcEEEEeCCeEEEEEcCC---H-HHHHHHHHHHHHHHHhccccccC
Q 006586 160 KETT--SQRLLNRKPFGEVHLK-VSSIRDSKSDDKRFSIFTGTKRLHLRAET---R-EDRFAWMEALQAVKDMFPRMSNS 232 (639)
Q Consensus 160 ~~~~--~~~~~~~kp~G~I~L~-~ssi~~~~~d~~~F~I~t~~kt~~L~AeS---~-edr~~WI~AL~~a~~~~~~~~~~ 232 (639)
+.+. ..........+.++|. ...++.. ++..++.+.+.+++.+++.+. . .++..|+++++.+..+.++....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (799)
T KOG1737|consen 146 IYLVELSKKLQRQGWLHALELAPLIAVEQT-SEYENENKSVMTKRIPLSIAVISVAQETREINVDVLRLLSSLPNLTGQL 224 (799)
T ss_pred hhhhhhhHHHhhcchhhhhhhccchhhhcc-ccccccccccccccccchhhhhcccccchhhhhhhhhhccccccchhhh
Confidence 1111 1123444566777887 5566665 677888888888888888774 3 78899999999999988775433
Q ss_pred C--cCCCCCc-----------ccccHHHHHHHHHhhcccHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 006586 233 E--LMAPMDS-----------IQVSTEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLET 299 (639)
Q Consensus 233 ~--~~~~~~~-----------~~~s~~~L~~~L~e~~~~~~~i~~~eq~~~~e~~~l~~qL~~~~e~~~~L~d~L~~le~ 299 (639)
. ...+..+ +...++++++++..++.+..++++||+++++++...|.++..+.++++.|+++|++++.
T Consensus 225 ~~r~l~~~~~~~~~~s~s~~k~~~~~e~~~~k~~~s~~s~~a~~~~e~~~~s~~~~~s~~s~~~~~q~~~l~~~l~~le~ 304 (799)
T KOG1737|consen 225 LLRELNALLEDKKEQSSSKSKLQERTERIALKVLTSLASVFAECDDEAELLSQSRIESDASHSESEQRIRLQEALSALEN 304 (799)
T ss_pred hhhhhccccccccccccchhhhHHHHHHHHHHHhhhhHHHHhHHHHHHHHHHHhHhhhhhhcchhhhhhhhhhHHHHHHh
Confidence 2 1111111 23347888999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhhHHhhhhhhhhccccccccccCCCCCCCCCCCCCCcccCCCCCCCccccccccccccccc--cCcccc-----
Q 006586 300 EKVDLENTVVDESQRQLIDQDASSTLRQDKFSEGTTESDDDNERVDGVEDETDEDENTFFDTRDFLS--SSSLRS----- 372 (639)
Q Consensus 300 ek~~LE~tvv~~sk~~~~~~~~~~~~~~~~~~~~st~s~~~~~~~~~~~~~~~dde~~f~Da~e~~~--~~~~~~----- 372 (639)
|+.+||..++..-.++....... . +. . .....++.....+|++|||||.+.++ .....+
T Consensus 305 q~~~le~a~~~~~~~~~~~~~~~-------~----~~-~--~~~~~~~~~~~~~e~~e~~da~s~~s~~~~~~~s~~~~e 370 (799)
T KOG1737|consen 305 QNTDLEVALRRAHAAQAALDLSK-------V----TR-L--SLLHEEESFSESDELTEQFDAESSLSDAQESLDSNSESE 370 (799)
T ss_pred hhhhHHHHHhHhhhhhhccCccc-------c----cc-c--cccccccccccccccccccccccccchhhhccCCccccc
Confidence 99999988775433332211100 0 01 0 00011224444567789999987654 111111
Q ss_pred -CCCCCCCCCC--C-CCccccccccccccccc--cc--ccccCCCccccccccCCCcccccccchhHHHHhhhcCCCCcc
Q 006586 373 -NGSDFRSSSF--S-SDEESLQIVESENDIDA--SI--RFVGTNYPYIKRRKKLPDPVEKEKGVSLWAMIKDNIGKDLTK 444 (639)
Q Consensus 373 -~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~R~~lp~~~~~~~~~~lwsilK~~iGkDLsk 444 (639)
.+..+..+.. . ..+..... +.+.... .. .....-.+.++||++||++..++.+++||+|||++||||||+
T Consensus 371 ~~~s~~~~s~~s~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~~~~~~~rr~~lp~~~~~~~~islw~~~k~~iGkDlsk 448 (799)
T KOG1737|consen 371 NEGSEDEESYTSDISDNGSSDAL--SADGDKSSQALNEKVPSGSGAEVARRTNLPAPSKPSSSISLWSILRNNIGKDLSK 448 (799)
T ss_pred ccccccccccccccccCCCcccc--ccccccccccccccccccccccccccccCCCCcCcCCCccHHHHHhhcccccccc
Confidence 1111111100 0 00000000 0000000 00 000001344699999999999999999999999999999999
Q ss_pred cccccccccCCchhhhhhcccchhHHHHHHhhccCCCCHHHHHHHHHHHHhhhccccCCCCCCCCCCCCCCeEEEEeCCC
Q 006586 445 ICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDK 524 (639)
Q Consensus 445 islPv~~~eP~S~Lqr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~af~vS~~~~~~~~~~KPfNPiLGETfe~~~~d~ 524 (639)
|+|||+||||+|+|||++|+|||++|||+|+++ +|+++||++|++|++|+|+.+..|.+|||||||||||||+++|+
T Consensus 449 v~~PV~~nEP~S~LQr~~EdlEYs~LLd~A~~~---~d~~~R~~~vaafavS~Ya~t~~r~~KPFNPlLgETyE~~r~dk 525 (799)
T KOG1737|consen 449 VSMPVEFNEPLSLLQRVAEDLEYSELLDKAANY---EDPLERMVYVAAFAVSSYSSTSRRTAKPFNPLLGETYEMDRPDK 525 (799)
T ss_pred cccceecCCcchHHHHhhhhccchhhhHHHHhc---CCcHHHHHHHHHHHhhhcchhcccccCCCCcccccceEeeccCC
Confidence 999999999999999999999999999999986 78999999999999999998889999999999999999999999
Q ss_pred CeEEEeeccccCCcceeeEEeCCceEEEEEeeeeEEEEeeEEEEEeceeEEEEeCC-CceEEEeeccceeeeeccceeee
Q 006586 525 GLQFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDD-GEVFQWSKVTSSIYNLILGKLYC 603 (639)
Q Consensus 525 g~~~iaEQVSHHPPIsA~~~e~~g~~~~g~~~~k~kF~G~si~i~~~G~~~i~f~~-gE~Y~~~~p~~~v~nii~G~~~~ 603 (639)
|+|||+|||||||||+|+|||+++|.|||++.+++||||+||+|.|.|.++|+|++ |++|+|.+|+++|+|||+|++|+
T Consensus 526 g~rf~sEqVSHhPPi~A~h~es~~w~~~~ds~~~sKF~Gksi~v~P~G~l~l~~~~~G~~~~w~kvtt~v~nii~Gk~~~ 605 (799)
T KOG1737|consen 526 GLRFFSEQVSHHPPISACHAESNNWTFWGDSKVKSKFWGKSIEVPPLGILHVTLKNIGEHYSWAKVTTTVHNIILGKLWV 605 (799)
T ss_pred ceeeeeeeeccCCCcccccccCCCceeeccccccccccccceeecCCceEEEEEcCCCccccccCccceecceeeccccc
Confidence 99999999999999999999999999999999999999999999999999999995 99999999999999999999999
Q ss_pred eeceeEEEEeC-Cc-cEEEEEEeecCcccCCCccccCC
Q 006586 604 DHYGTMRIEGN-RE-YSCKLKFKEQSIIDRNPHQVFPS 639 (639)
Q Consensus 604 e~~G~~~I~~~-tg-~~~~l~F~~~~~~g~~~~~v~G~ 639 (639)
|++|+|.|+++ ++ .+|+|+|++.|||+++.|+|+|.
T Consensus 606 D~~ge~~i~n~~~~~~~c~L~F~~~~~~~~~~~ev~g~ 643 (799)
T KOG1737|consen 606 DHYGEMEITNHTTGSDKCKLKFVKAGYFSRNAREVEGS 643 (799)
T ss_pred cccccEEEecCCCCcceeEEEEeeecccCCCcceeEEE
Confidence 99999999996 55 67999999999999999999984
No 2
>KOG2209 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-70 Score=554.30 Aligned_cols=224 Identities=42% Similarity=0.736 Sum_probs=218.7
Q ss_pred ccccccCCCcccccccchhHHHHhhhcCCCCcccccccccccCCchhhhhhcccchhHHHHHHhhccCCCCHHHHHHHHH
Q 006586 412 IKRRKKLPDPVEKEKGVSLWAMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVA 491 (639)
Q Consensus 412 ~~~R~~lp~~~~~~~~~~lwsilK~~iGkDLskislPv~~~eP~S~Lqr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~ 491 (639)
.+.||+||+++-....+|||+|||+||||||+||+|||+||||+||||||+|.|+|.+||.+|+. +.||+|||.+|+
T Consensus 26 hk~RT~LPa~m~sr~d~SIW~Ilr~ciGkelSkiTmPV~~NEPLSFLQRltEyme~~yLi~kAs~---~~~p~eRmqyVA 102 (445)
T KOG2209|consen 26 HKHRTSLPAPMFSRNDFSIWSILRKCIGKELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASS---QSDPVERMQYVA 102 (445)
T ss_pred hhhcccCCccccccccccHHHHHHhhhchhhhheeeeeeeCCcHHHHHHHHHHHHHHHHHHHHhh---CCChHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999997 489999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCCCeEEEEeCCCCeEEEeeccccCCcceeeEEe--CCceEEEEEeeeeEEEEeeEEEEE
Q 006586 492 AFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLQFFSEKVSHHPMIVACHCQ--GTGWKFWGDSNLKSKFWGRSIQLD 569 (639)
Q Consensus 492 af~vS~~~~~~~~~~KPfNPiLGETfe~~~~d~g~~~iaEQVSHHPPIsA~~~e--~~g~~~~g~~~~k~kF~G~si~i~ 569 (639)
|||||+.++...|..||||||||||||+.+.|.|+|||||||||||||||||+| ++.|.|.|.+.+|.||||+||++.
T Consensus 103 AFAvsavas~weR~gKPFNPLl~et~el~r~dlg~R~i~EQVSHHPPiSAfhaEgl~~dF~fhGsi~PklkFWgksvea~ 182 (445)
T KOG2209|consen 103 AFAVSAVASQWERTGKPFNPLLGETYELEREDLGFRFISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAE 182 (445)
T ss_pred HHHHHHHHHhHHHhcCCCcchhhhhhhheecccceEEeehhhccCCChhHhhhcccCcceEEeeeecccceeccceeecC
Confidence 999999999999999999999999999999999999999999999999999999 579999999999999999999999
Q ss_pred eceeEEEEeC-CCceEEEeeccceeeeeccceeeeeeceeEEEEeC-CccEEEEEEeecCcccCCCccccC
Q 006586 570 PVGVLTLEFD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGN-REYSCKLKFKEQSIIDRNPHQVFP 638 (639)
Q Consensus 570 ~~G~~~i~f~-~gE~Y~~~~p~~~v~nii~G~~~~e~~G~~~I~~~-tg~~~~l~F~~~~~~g~~~~~v~G 638 (639)
|.|+++|+|. .||.|+|+.|+++|||||+|++|||++|+|+|.++ ||++|+|+|+++|+||++.|+|+|
T Consensus 183 Pkgtitle~~k~nEaYtWtnp~CcvhNiIvGklwieqyg~~eI~nh~Tg~~~vl~Fk~~G~~gk~lHkVEG 253 (445)
T KOG2209|consen 183 PKGTITLELLKHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGHKCVLNFKPCGLFGKELHKVEG 253 (445)
T ss_pred CCceEEEEecccCcceeccCCcceeeeehhhhhhHhhcCcEEEEecCccceeEEecccccccccchhheee
Confidence 9999999998 69999999999999999999999999999999997 899999999999999999999998
No 3
>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related. These include mammalian oxysterol-binding protein (OSBP), a protein of about 800 amino-acid residues that binds a variety of oxysterols (oxygenated derivatives of cholesterol); yeast OSH1, a protein of 859 residues that also plays a role in ergosterol synthesis; yeast proteins HES1 and KES1, highly related proteins of 434 residues that seem to play a role in ergosterol synthesis; and yeast hypothetical proteins YHR001w, YHR073w and YKR003w.; PDB: 3SPW_A 1ZI7_C 1ZHW_A 1ZHX_A 1ZHY_A 1ZHZ_A 1ZHT_A.
Probab=100.00 E-value=1.3e-62 Score=527.69 Aligned_cols=207 Identities=47% Similarity=0.866 Sum_probs=179.5
Q ss_pred hhHHHHhhhcCCCCcccccccccccCCchhhhhhcccchhHHHHHHhhccCCCCHHHHHHHHHHHHhhhccccCCCCCCC
Q 006586 429 SLWAMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRICKP 508 (639)
Q Consensus 429 ~lwsilK~~iGkDLskislPv~~~eP~S~Lqr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~af~vS~~~~~~~~~~KP 508 (639)
|||++||+++||||++|+|||+|+||+|+|||++++|+|++||++|+. .+||++||++|++|++|+|+.+..|++||
T Consensus 1 s~w~~lK~~~G~dLs~islPv~~~eP~S~Lqr~~~~~~y~~lL~~Aa~---~~d~~eR~~~V~~f~~S~~~~~~~~~~KP 77 (354)
T PF01237_consen 1 SIWSFLKQKIGKDLSRISLPVFFNEPRSFLQRLAEDFEYPDLLDKAAE---EDDPLERMLYVAAFALSSYSSTPGRTKKP 77 (354)
T ss_dssp HHHHHHHHT--S-GGGS---GGGEEEEEGGGGGGGGSSSHHHHHGGGG---S-HHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHhhhcCCCChhcCccCceecCCCcHHHhhhhhhhChHHHhccCC---CCCHHHHHHHHHHHHHhhhhhhcCCCCcC
Confidence 699999999999999999999999999999999999999999999996 58999999999999999999887788999
Q ss_pred CCCCCCCeEEEEeCCCCeEEEeeccccCCcceeeEEeCCceEEEEEeeeeEEEEeeEEEEEeceeEEEEeCC-CceEEEe
Q 006586 509 FNPLLGETYEADYPDKGLQFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDD-GEVFQWS 587 (639)
Q Consensus 509 fNPiLGETfe~~~~d~g~~~iaEQVSHHPPIsA~~~e~~g~~~~g~~~~k~kF~G~si~i~~~G~~~i~f~~-gE~Y~~~ 587 (639)
||||||||||+.++ +|++|+||||||||||+|||++++||+++|++.++++|+|+||++.+.|.++|+|++ ||+|+|+
T Consensus 78 fNPiLGETfe~~~~-~~~~~~aEQVSHHPPisa~~~~~~~~~~~g~~~~~~kf~g~sv~~~~~G~~~i~f~~~~e~Y~~~ 156 (354)
T PF01237_consen 78 FNPILGETFELVRP-DGTRFIAEQVSHHPPISAFHAEGRGWKFYGHIEPKSKFWGNSVEVNPIGKVTITFPDGGETYTWT 156 (354)
T ss_dssp E---TT-EE--TT--T-EEEEEEEEETTTTEEEEEEEETTEEEEEEEEEEEEE-TT-EEEEEEEEEEEEET--TEEEEEE
T ss_pred cCCCCcceeeeccC-ceEEEEEecccCCCCceEEEEEcCCEEEEEEEeeeEEEeceEEEEEECCcEEEEEcCCceEEEEe
Confidence 99999999999988 799999999999999999999999999999999999999999999999999999996 7999999
Q ss_pred eccceeeeeccceeeeeeceeEEEEeC-CccEEEEEEeecCcccCCCccccCC
Q 006586 588 KVTSSIYNLILGKLYCDHYGTMRIEGN-REYSCKLKFKEQSIIDRNPHQVFPS 639 (639)
Q Consensus 588 ~p~~~v~nii~G~~~~e~~G~~~I~~~-tg~~~~l~F~~~~~~g~~~~~v~G~ 639 (639)
+|+++|+|||+|++|+|++|+|+|+|. +|++|+|+|+++||||++.|+|+|.
T Consensus 157 ~p~~~i~gi~~G~~~~e~~G~~~i~~~~tg~~~~i~f~~~~~f~~~~~~v~G~ 209 (354)
T PF01237_consen 157 KPTTYIRGIIFGKRYIEHVGKMVITCHKTGLKAEIEFKPKGWFSGKSNEVEGK 209 (354)
T ss_dssp --SEEEESTTTTS-EEEEESEEEEEET-TS-EEEEEEETSSSTSSSTTEEEEE
T ss_pred cCcEEEeeeecccEEEEecCCEEEEcCCcceEEEEEEecCCcccccceeeEEE
Confidence 999999999999999999999999996 9999999999999999999999883
No 4
>KOG2210 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-46 Score=397.93 Aligned_cols=211 Identities=26% Similarity=0.349 Sum_probs=194.9
Q ss_pred cccchhHHHHhh-hcCCCCcccccccccccCCchhhhhhcccchhHHHHHHhhccCCCCHHHHHHHHHHHHhhhccccCC
Q 006586 425 EKGVSLWAMIKD-NIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEG 503 (639)
Q Consensus 425 ~~~~~lwsilK~-~iGkDLskislPv~~~eP~S~Lqr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~af~vS~~~~~~~ 503 (639)
+.+..||.++++ .+|+||++|+||.|++||+|+||++++.+.+.+||-.|.. .+||++||+.|++|++|+|+....
T Consensus 32 ~~~s~i~~L~sq~rpg~DLs~v~LPtfile~rs~Le~~~~~~~~~dll~~~~~---~~~p~~R~~~VvkwylS~~~~~~~ 108 (392)
T KOG2210|consen 32 EGKSIILDLLSQLRPGMDLSRVVLPTFILEPRSLLEKYTDFSYHPDLLLEASS---EADPLERMLAVVKWYLSGFHAGPK 108 (392)
T ss_pred hccceeecHhhhccCCCCcccccchhhhhhhHHHHHHhhhhhhccchhccccc---CCCHHHHhhhheeeeehhcccccc
Confidence 455668999999 8999999999999999999999999999988888877764 689999999999999999998877
Q ss_pred CCCCCCCCCCCCeEEEEeC-----C-CCeEEEeeccccCCcceeeEEeC--CceEEEEEeeeeEEEEeeEEEEEeceeEE
Q 006586 504 RICKPFNPLLGETYEADYP-----D-KGLQFFSEKVSHHPMIVACHCQG--TGWKFWGDSNLKSKFWGRSIQLDPVGVLT 575 (639)
Q Consensus 504 ~~~KPfNPiLGETfe~~~~-----d-~g~~~iaEQVSHHPPIsA~~~e~--~g~~~~g~~~~k~kF~G~si~i~~~G~~~ 575 (639)
..+|||||||||||.|.|. + +.+.|+||||||||||||||++. .|+++.|++.+|++|.|+||.|.+.|..+
T Consensus 109 ~~~~PyNPILGEtF~~~w~~~~~p~~~~~~~iAEQVSHHPPvSAf~~~~~~~~i~v~g~v~~kSkF~G~s~~V~~~G~~~ 188 (392)
T KOG2210|consen 109 GRKKPYNPILGETFTCHWKYPPHPSKGDTVFVAEQVSHHPPVSAFYVTCPKKGIQVDGHVWAKSKFLGNSIAVAMIGKGV 188 (392)
T ss_pred cccCCCCccchhhcccccccCCCCCCceEEEEeecccCCCCcceeeEEccccCeEEEEEEeecccccccceeEEEcCCcE
Confidence 7788999999999999982 2 35999999999999999999874 69999999999999999999999999999
Q ss_pred EEeC-CCceEEEeeccceeeeeccceeeeeeceeEEEEeC-CccEEEEEEeecCcccCCCccccC
Q 006586 576 LEFD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGN-REYSCKLKFKEQSIIDRNPHQVFP 638 (639)
Q Consensus 576 i~f~-~gE~Y~~~~p~~~v~nii~G~~~~e~~G~~~I~~~-tg~~~~l~F~~~~~~g~~~~~v~G 638 (639)
|+|. .+|+|.+++|.++++|+|+|.+|+|+.|+++|.|. +++.+.+.|+.++|+|+..+.+.|
T Consensus 189 l~ll~~~E~Y~~t~P~~~~rg~~~~~p~velggkv~I~c~kt~~~a~~~~~~~~f~g~~~s~~~~ 253 (392)
T KOG2210|consen 189 LKLLDHDETYLITFPNAYARGILLGAPWVELGGKVVIECPKTGLSAILESILKPFLGGKNSFNAR 253 (392)
T ss_pred EEEEecCcceeeccCCceeeeeeeccceEecCceEEEEcCCcceeeeEeeccCcccccccccceE
Confidence 9987 59999999999999999999999999999999995 899999999999999999877655
No 5
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.91 E-value=7.8e-24 Score=185.58 Aligned_cols=89 Identities=39% Similarity=0.699 Sum_probs=78.2
Q ss_pred EEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCce
Q 006586 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (639)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (639)
++|||.||+|++|+||+|||||++|.|+||+++. + ....|+|
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~--------~------------------------------~~~~~~G 42 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEA--------E------------------------------KSHGCRG 42 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCc--------c------------------------------CcCCCcE
Confidence 4799999999999999999999999999999862 1 1123669
Q ss_pred eEEccceEEEecCCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHH
Q 006586 175 EVHLKVSSIRDSKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQA 221 (639)
Q Consensus 175 ~I~L~~ssi~~~~~d~~~F~I~t~~-kt~~L~AeS~edr~~WI~AL~~ 221 (639)
.|+|+.|.|...+.+.++|.|.++. |+|+|+|+|++||++||+||+.
T Consensus 43 ~I~L~~~~i~~~~~~~~~F~i~~~~~r~~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 43 SIFLKKAIIAAHEFDENRFDISVNENVVWYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred EEECcccEEEcCCCCCCEEEEEeCCCeEEEEEeCCHHHHHHHHHHHhh
Confidence 9999999998877778999997766 9999999999999999999984
No 6
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.85 E-value=3.6e-21 Score=169.89 Aligned_cols=89 Identities=30% Similarity=0.533 Sum_probs=76.6
Q ss_pred EEEEEEeecC--CCCCceeeEEEEe--CCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCC
Q 006586 95 ISGVLYKWVN--YGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (639)
Q Consensus 95 ~~G~L~K~~n--~~KgWkrRWFVL~--~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (639)
++|||.|+++ ..|+||+|||||+ ++.|+|||++. ..
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~----------------------------------------d~ 40 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQ----------------------------------------DA 40 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCC----------------------------------------cc
Confidence 4799999976 6899999999997 46899999852 12
Q ss_pred CCceeEEccceEEEecCCC-CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 171 KPFGEVHLKVSSIRDSKSD-DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 171 kp~G~I~L~~ssi~~~~~d-~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
+|.|.|+|..+++.....+ +..|.|.|++|+|+|+|+|++||++||+||+.++
T Consensus 41 ~p~G~I~L~~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~~~ 94 (95)
T cd01265 41 KPLGRVDLSGAAFTYDPREEKGRFEIHSNNEVIALKASSDKQMNYWLQALQSKR 94 (95)
T ss_pred cccceEECCccEEEcCCCCCCCEEEEEcCCcEEEEECCCHHHHHHHHHHHHhhc
Confidence 4789999999888765544 7899999999999999999999999999999875
No 7
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.83 E-value=1e-20 Score=172.02 Aligned_cols=110 Identities=51% Similarity=0.868 Sum_probs=59.8
Q ss_pred EEEEEEeecCC-CCCceeeEEEEe-CCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCC
Q 006586 95 ISGVLYKWVNY-GKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (639)
Q Consensus 95 ~~G~L~K~~n~-~KgWkrRWFVL~-~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (639)
++|||+||+++ ++|||+|||||+ +|+|+|||.++ ...+.+|+|+.+.+.+.+.......+...
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~---------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------ 65 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPR---------DKKDVRIIGEESSRVIRKGDWSISRRSSR------ 65 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS----------------------TT-SB-SEEEE---GGGT------
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeeccc---------ccccccccccchhceEeecccCccccccc------
Confidence 68999999998 999999999999 99999999842 24567777777655444322221111000
Q ss_pred ceeEEccceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
...++.. . .......+.|.|+|++|+|||+|++.+|+.+||+||++|
T Consensus 66 ~~~~~~~-~--~~~~~~~~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 66 IQGIKDK-N--PFGEIHLKVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp -EEEES--T----SS-SSEEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred ccccccC-C--cccCcCCCCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 0111111 0 011234577888999999999999999999999999986
No 8
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.81 E-value=1.2e-19 Score=162.50 Aligned_cols=90 Identities=28% Similarity=0.458 Sum_probs=73.6
Q ss_pred EEEEEEeecCC-CCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 95 ISGVLYKWVNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 95 ~~G~L~K~~n~-~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
++|||.|++.. .|+||+|||||+++.|+||+++. + ..|.
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~--------d--------------------------------~~~~ 40 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPL--------D--------------------------------AFAK 40 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCC--------C--------------------------------cCcC
Confidence 48999999986 69999999999999999999852 1 2377
Q ss_pred eeEEccce----EEEec-----CCC-CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVS----SIRDS-----KSD-DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 174 G~I~L~~s----si~~~-----~~d-~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
|+|.|..+ +|... ..+ ...|.|.|+.|+|+|.|+|++||.+||+||+.|+.
T Consensus 41 G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 41 GEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPERKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred cEEEeeccccceeEeccCCccccccccceEEEEeCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 99999754 34321 111 23899999999999999999999999999999875
No 9
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.80 E-value=2.6e-19 Score=159.37 Aligned_cols=90 Identities=19% Similarity=0.347 Sum_probs=78.0
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
.++|||.|+++..+.|++|||||+++.|+|||++.. ..|.
T Consensus 3 ~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~----------------------------------------~~~~ 42 (100)
T cd01233 3 SKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDKD----------------------------------------PVER 42 (100)
T ss_pred ceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCCC----------------------------------------ccEe
Confidence 589999999999999999999999999999998521 2366
Q ss_pred eeEEccceEEEecCC------CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSKS------DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 174 G~I~L~~ssi~~~~~------d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
|.|+|..+.+....+ .+..|.|.++.|+|+|+|+|++|+++||+||+...
T Consensus 43 ~~I~L~~~~v~~~~~~~~~~~~~~~F~I~t~~rt~~~~A~s~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 43 GVINLSTARVEHSEDQAAMVKGPNTFAVCTKHRGYLFQALSDKEMIDWLYALNPLY 98 (100)
T ss_pred eEEEecccEEEEccchhhhcCCCcEEEEECCCCEEEEEcCCHHHHHHHHHHhhhhh
Confidence 999999887765543 25689999999999999999999999999998764
No 10
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.80 E-value=3.1e-19 Score=159.08 Aligned_cols=89 Identities=24% Similarity=0.397 Sum_probs=74.0
Q ss_pred EEEEEEeecC---CCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCC
Q 006586 95 ISGVLYKWVN---YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (639)
Q Consensus 95 ~~G~L~K~~n---~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (639)
++|||.|.++ ++|.||+|||||+++.|+|||.+.. ..+
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~---------------------------------------~~~ 42 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSK---------------------------------------DDP 42 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCc---------------------------------------cCC
Confidence 6899999988 8999999999999999999997521 122
Q ss_pred CceeEEccceEE-EecCCC------CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 172 PFGEVHLKVSSI-RDSKSD------DKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 172 p~G~I~L~~ssi-~~~~~d------~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
+.|+|+|..|.. ...... +..|.|.|+.|+|+|+|+|++++++||++|+.|
T Consensus 43 ~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~rt~~l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 43 DDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred CCceEEcccceEEeeccccccccccCcEEEEEcCCceEEEEeCCHHHHHHHHHHHHhh
Confidence 349999998854 332211 368999999999999999999999999999976
No 11
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.77 E-value=2.5e-18 Score=151.81 Aligned_cols=89 Identities=29% Similarity=0.502 Sum_probs=71.8
Q ss_pred EEEEEEeecCCCCCceeeEEEEe--CCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCC
Q 006586 95 ISGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (639)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~--~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (639)
.+|||.|+++..+.||+|||||. ++.|+||+++. ..+|
T Consensus 1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~----------------------------------------~~~~ 40 (101)
T cd01235 1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFE----------------------------------------DTAE 40 (101)
T ss_pred CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCC----------------------------------------CCcc
Confidence 37999999999999999999997 56999999751 1337
Q ss_pred ceeEEccceE-EEecC---------CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 173 FGEVHLKVSS-IRDSK---------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 173 ~G~I~L~~ss-i~~~~---------~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
.|.|+|..+. +.... .....|.|.+++|+|+|.|+|++|+++||+||+.++
T Consensus 41 ~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 41 KGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTSKRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred ceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeCCceEEEECCCHHHHHHHHHHHHhhC
Confidence 7999999764 33211 123457788999999999999999999999999864
No 12
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.77 E-value=2e-18 Score=155.48 Aligned_cols=91 Identities=26% Similarity=0.321 Sum_probs=72.1
Q ss_pred cEEEEEEeecCC-----CCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhccc
Q 006586 94 GISGVLYKWVNY-----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (639)
Q Consensus 94 ~~~G~L~K~~n~-----~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (639)
+++|||+|++.. .++||+|||||+++.|+||+++. + .
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~--------~------------------------------~ 42 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDF--------E------------------------------K 42 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCc--------c------------------------------c
Confidence 368999999632 24899999999999999999851 1 1
Q ss_pred CCCCceeEEccceEEEec----C------CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 169 NRKPFGEVHLKVSSIRDS----K------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~----~------~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
...|+|+|+|..+.+... . .+...|.|.+++|+|+|.|+|++||++||+||+.+
T Consensus 43 ~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i~t~~r~~yl~A~s~~er~~WI~ai~~~ 106 (106)
T cd01238 43 RGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQVVHDEGTLYVFAPTEELRKRWIKALKQV 106 (106)
T ss_pred ccCcceeEECCcceEEEEecCCcCcccccccCccEEEEeCCCeEEEEcCCHHHHHHHHHHHHhC
Confidence 133779999998754321 1 13568999999999999999999999999999863
No 13
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.75 E-value=7.4e-18 Score=145.02 Aligned_cols=90 Identities=49% Similarity=0.902 Sum_probs=78.7
Q ss_pred EEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCce
Q 006586 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (639)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (639)
++|||+|+++..++|++|||||+++.|+||+++.. ....|.|
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~--------------------------------------~~~~~~~ 42 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSS--------------------------------------MRGKPRG 42 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCcc--------------------------------------CCCCceE
Confidence 58999999988899999999999999999998621 0023679
Q ss_pred eEEccceEEEecCCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 006586 175 EVHLKVSSIRDSKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 175 ~I~L~~ssi~~~~~d~~~F~I~t~~-kt~~L~AeS~edr~~WI~AL~~a 222 (639)
.|+|..+.+..+..+...|.|.++. ++|+|+|+|.+|+.+||.||+.|
T Consensus 43 ~i~l~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 43 TILLSGAVISEDDSDDKCFTIDTGGDKTLHLRANSEEERQRWVDALELA 91 (91)
T ss_pred EEEeceEEEEECCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHhC
Confidence 9999999888776668899999887 99999999999999999999875
No 14
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.74 E-value=7e-18 Score=146.69 Aligned_cols=86 Identities=36% Similarity=0.621 Sum_probs=75.3
Q ss_pred EEEEee-cCCCCCceeeEEEE--eCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 97 GVLYKW-VNYGKGWRPRWFVL--QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 97 G~L~K~-~n~~KgWkrRWFVL--~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
|||.|+ .+..+||++||||| ++|+|+||+++. + .+.+
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~--------~--------------------------------~~~r 40 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQN--------S--------------------------------GKLR 40 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCC--------C--------------------------------CeeE
Confidence 788887 78999999999999 999999999751 1 1245
Q ss_pred eeEEccceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
|+|+|..+.|..++ +.++|.|.++..+|||+|.|.+|++.||.||+.|+
T Consensus 41 Gsi~v~~a~is~~~-~~~~I~idsg~~i~hLKa~s~~~f~~Wv~aL~~a~ 89 (89)
T PF15409_consen 41 GSIDVSLAVISANK-KSRRIDIDSGDEIWHLKAKSQEDFQRWVSALQKAK 89 (89)
T ss_pred eEEEccceEEEecC-CCCEEEEEcCCeEEEEEcCCHHHHHHHHHHHHhcC
Confidence 99999999887754 67899999999999999999999999999999874
No 15
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.74 E-value=1.4e-17 Score=146.45 Aligned_cols=88 Identities=28% Similarity=0.491 Sum_probs=73.2
Q ss_pred EEEEEEeecCCC----CCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCC
Q 006586 95 ISGVLYKWVNYG----KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (639)
Q Consensus 95 ~~G~L~K~~n~~----KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (639)
++|||+|++..+ +.|++|||||.++.|+||+++.. .
T Consensus 2 ~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~----------------------------------------~ 41 (96)
T cd01260 2 CDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQD----------------------------------------E 41 (96)
T ss_pred ceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCC----------------------------------------C
Confidence 689999997544 48999999999999999998521 2
Q ss_pred CCceeEEccceEEEecCC--CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 006586 171 KPFGEVHLKVSSIRDSKS--DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 171 kp~G~I~L~~ssi~~~~~--d~~~F~I~t~~-kt~~L~AeS~edr~~WI~AL~~a 222 (639)
+|.|.|.|..+.|..... ....|.|.++. ++|+|+|+|++|+++||.||+.|
T Consensus 42 ~~~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~~~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 42 KAEGLIFLSGFTIESAKEVKKKYAFKVCHPVYKSFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred ccceEEEccCCEEEEchhcCCceEEEECCCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 366999999987765422 34678888887 99999999999999999999875
No 16
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.73 E-value=1.3e-17 Score=149.63 Aligned_cols=88 Identities=25% Similarity=0.408 Sum_probs=70.1
Q ss_pred EEEEEEeec---------CCCCCceeeEEEEe-CCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccch
Q 006586 95 ISGVLYKWV---------NYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (639)
Q Consensus 95 ~~G~L~K~~---------n~~KgWkrRWFVL~-~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~ 164 (639)
.+|||+|.. ...|+||||||||+ +|.|+||+++.
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~------------------------------------ 44 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEM------------------------------------ 44 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCC------------------------------------
Confidence 369999974 24789999999996 68888887641
Q ss_pred hcccCCCCceeEEccceEEEecCC----CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 006586 165 QRLLNRKPFGEVHLKVSSIRDSKS----DDKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (639)
Q Consensus 165 ~~~~~~kp~G~I~L~~ssi~~~~~----d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~ 221 (639)
...+|.|+|+|..|....... ....|.|.|++|+|+|.|+|++|+++||++|..
T Consensus 45 ---~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~tp~R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 45 ---PTTLPQGTIDMNQCTDVVDAEARTGQKFSICILTPDKEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred ---CCcccceEEEccceEEEeecccccCCccEEEEECCCceEEEEeCCHHHHHHHHHHHHh
Confidence 123578999999886554322 236799999999999999999999999999964
No 17
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.71 E-value=8.1e-17 Score=148.77 Aligned_cols=92 Identities=26% Similarity=0.492 Sum_probs=76.3
Q ss_pred EEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCce
Q 006586 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (639)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (639)
++|||+|+++..+.|++|||||.++.|+||+++. ...|.|
T Consensus 2 k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~----------------------------------------~~~~~g 41 (125)
T cd01252 2 REGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTT----------------------------------------DKEPRG 41 (125)
T ss_pred cEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCC----------------------------------------CCCceE
Confidence 6899999999999999999999999999999752 123679
Q ss_pred eEEccceEEEecCC--CCCcEEEEeCC---------------------eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 175 EVHLKVSSIRDSKS--DDKRFSIFTGT---------------------KRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 175 ~I~L~~ssi~~~~~--d~~~F~I~t~~---------------------kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
.|+|..+.|..... ....|.|.+++ ++|+|+|+|.+|+++||+||+.++..-
T Consensus 42 ~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~~ 116 (125)
T cd01252 42 IIPLENVSIREVEDPSKPFCFELFSPSDKQQIKACKTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISPN 116 (125)
T ss_pred EEECCCcEEEEcccCCCCeeEEEECCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 99999888776533 34568776543 689999999999999999999998754
No 18
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.70 E-value=1.3e-16 Score=142.63 Aligned_cols=90 Identities=23% Similarity=0.338 Sum_probs=71.8
Q ss_pred CcEEEEEEeecCCCCCceeeEEEEeCC------eEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhc
Q 006586 93 NGISGVLYKWVNYGKGWRPRWFVLQDG------VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (639)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g------~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~ 166 (639)
..++|||.|+ |.||+|||||+++ .|.||+++. + .+
T Consensus 2 v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek--------~----~~----------------------- 42 (101)
T cd01257 2 VRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEK--------K----FL----------------------- 42 (101)
T ss_pred ccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChh--------h----cc-----------------------
Confidence 3689999998 8999999999877 899999852 1 00
Q ss_pred ccCCCCceeEEccceEEEecCCC---CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 006586 167 LLNRKPFGEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (639)
Q Consensus 167 ~~~~kp~G~I~L~~ssi~~~~~d---~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~ 221 (639)
....+|.|+|+|..|.......+ ...|.|.|++++|+|.|+|++|+++||++|..
T Consensus 43 ~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~t~dr~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 43 QKGSAPKRVIPLESCFNINKRADAKHRHLIALYTRDEYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred ccCCCceEEEEccceEEEeeccccccCeEEEEEeCCceEEEEeCCHHHHHHHHHHHhh
Confidence 11245889999999965432222 46788999999999999999999999999964
No 19
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.69 E-value=1.1e-16 Score=144.48 Aligned_cols=88 Identities=30% Similarity=0.385 Sum_probs=69.9
Q ss_pred EEEEEEeecCCCC----CceeeEEEEeCCe-------EEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccc
Q 006586 95 ISGVLYKWVNYGK----GWRPRWFVLQDGV-------LSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (639)
Q Consensus 95 ~~G~L~K~~n~~K----gWkrRWFVL~~g~-------LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~ 163 (639)
.+|||.|++...+ +||+|||||+++. |+||+++.
T Consensus 1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~----------------------------------- 45 (108)
T cd01266 1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSR----------------------------------- 45 (108)
T ss_pred CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCC-----------------------------------
Confidence 3799999987544 9999999998765 69999751
Q ss_pred hhcccCCCCceeEEccceEEEecC----CCC----CcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 164 SQRLLNRKPFGEVHLKVSSIRDSK----SDD----KRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 164 ~~~~~~~kp~G~I~L~~ssi~~~~----~d~----~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
..+|.|.|+|..+.+.... ... ..|.|.++.|+|+|.|+|++|+++||.||+..
T Consensus 46 -----~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 46 -----KFKLEFVIDLESCSQVDPGLLCTAGNCIFGYGFDIETIVRDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred -----CCccceEEECCccEEEcccccccccCcccceEEEEEeCCccEEEEECCHHHHHHHHHHHHhh
Confidence 1347799999997654321 111 24889999999999999999999999999753
No 20
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.66 E-value=3.8e-16 Score=135.14 Aligned_cols=90 Identities=30% Similarity=0.604 Sum_probs=73.8
Q ss_pred EEEEEEeecCC-CCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 95 ISGVLYKWVNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 95 ~~G~L~K~~n~-~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
++|||.|++.. .++|++|||||.++.|.||++.. + ....+.
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~--------~------------------------------~~~~~~ 42 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLK--------D------------------------------YDNAHV 42 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCc--------c------------------------------cccccc
Confidence 57999999865 78899999999999999999751 1 012255
Q ss_pred eeEEccceEEEecCC---CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSKS---DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 174 G~I~L~~ssi~~~~~---d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
+.|+|..+++..... ....|.|.++.++|+|+|+|.+|+++||.||+.+
T Consensus 43 ~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~f~a~s~~~~~~Wi~al~~~ 94 (94)
T cd01250 43 KEIDLRRCTVRHNGKQPDRRFCFEVISPTKTWHFQADSEEERDDWISAIQES 94 (94)
T ss_pred eEEeccceEEecCccccCCceEEEEEcCCcEEEEECCCHHHHHHHHHHHhcC
Confidence 899999887765543 3568999999999999999999999999999863
No 21
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.63 E-value=2.1e-15 Score=134.86 Aligned_cols=92 Identities=27% Similarity=0.434 Sum_probs=66.7
Q ss_pred cEEEEEEeecCCCCCceeeEEEEe-CCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCC
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~-~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (639)
.++|||.|+++..+.||+|||||+ ++.|.||+++.. +. .....|
T Consensus 2 ~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~-------~~----------------------------~~~~i~ 46 (102)
T cd01241 2 VKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPE-------DG----------------------------DPFLPP 46 (102)
T ss_pred cEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCC-------cc----------------------------Cccccc
Confidence 589999999999999999999998 899999997521 00 000123
Q ss_pred ceeEEccceEEEe-cCCCCCcEEEE------eCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 173 FGEVHLKVSSIRD-SKSDDKRFSIF------TGTKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 173 ~G~I~L~~ssi~~-~~~d~~~F~I~------t~~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
.+.+.|..|++.. +......|.|. +..|+| .|+|++||++||+||+.+
T Consensus 47 l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~~~~~r~f--~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 47 LNNFSVAECQLMKTERPRPNTFIIRCLQWTTVIERTF--HVESPEEREEWIHAIQTV 101 (102)
T ss_pred cCCeEEeeeeeeeccCCCcceEEEEeccCCcccCEEE--EeCCHHHHHHHHHHHHhh
Confidence 4555666665532 23335689987 234555 599999999999999886
No 22
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.59 E-value=1.6e-14 Score=124.82 Aligned_cols=93 Identities=32% Similarity=0.487 Sum_probs=78.7
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
.++|||.|++...++|++|||||.++.|+||++... .....|.
T Consensus 2 ~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~-------------------------------------~~~~~~~ 44 (104)
T PF00169_consen 2 IKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKD-------------------------------------KSDSKPK 44 (104)
T ss_dssp EEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTT-------------------------------------TTESSES
T ss_pred EEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCcc-------------------------------------ccceeee
Confidence 589999999988999999999999999999998521 1123477
Q ss_pred eeEEccceEEEecCC--------CCCcEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSKS--------DDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 174 G~I~L~~ssi~~~~~--------d~~~F~I~t~~k-t~~L~AeS~edr~~WI~AL~~a~ 223 (639)
+.|+|..+.|..... ....|.|.++.+ +|+|+|+|++++.+||++|+.|.
T Consensus 45 ~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 45 GSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGKSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEecCceEEEcCccccccccCCCcEEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 999999998876433 357899998875 99999999999999999999985
No 23
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.59 E-value=3.1e-15 Score=132.94 Aligned_cols=85 Identities=25% Similarity=0.312 Sum_probs=72.3
Q ss_pred EEEEEeecCC-CCCceeeEEEEeC----CeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCC
Q 006586 96 SGVLYKWVNY-GKGWRPRWFVLQD----GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (639)
Q Consensus 96 ~G~L~K~~n~-~KgWkrRWFVL~~----g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (639)
.|||.|+++. .|.||+|||+|.+ +.|+||+.+.. .
T Consensus 2 ~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~----------------------------------------~ 41 (98)
T cd01245 2 KGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKK----------------------------------------T 41 (98)
T ss_pred CCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCC----------------------------------------C
Confidence 5999999987 9999999999976 99999998621 2
Q ss_pred CCceeEEccceEEEecCC----CCCcEEEEeCCe--EEEEEcCCHHHHHHHHHHHHH
Q 006586 171 KPFGEVHLKVSSIRDSKS----DDKRFSIFTGTK--RLHLRAETREDRFAWMEALQA 221 (639)
Q Consensus 171 kp~G~I~L~~ssi~~~~~----d~~~F~I~t~~k--t~~L~AeS~edr~~WI~AL~~ 221 (639)
.|.|.|+|..+.|++..+ .+..|.|.++.+ +|+++|++ +||++||++|+.
T Consensus 42 ~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 42 KPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERALPTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred CccceeeccccEEEEccccccCCCeEEEEecCCCCeEEEEeCCH-HHHHHHHHHHhc
Confidence 377999999998887433 247899998875 99999999 999999999985
No 24
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.57 E-value=1.1e-14 Score=129.51 Aligned_cols=85 Identities=16% Similarity=0.166 Sum_probs=67.0
Q ss_pred EEEEeec----CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCC
Q 006586 97 GVLYKWV----NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (639)
Q Consensus 97 G~L~K~~----n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (639)
|.|.|+. ...++||+|||||.++.|+||+++. .+|
T Consensus 5 ~~~~kr~~~~~~~~~n~KkRwF~Lt~~~L~Y~k~~~-----------------------------------------~~~ 43 (98)
T cd01244 5 LQQVDRSRLAWKKVLHFKKRYFQLTTTHLSWAKDVQ-----------------------------------------CKK 43 (98)
T ss_pred cEEEEcccCCCccCcCCceeEEEECCCEEEEECCCC-----------------------------------------Cce
Confidence 5566664 2347899999999999999999641 347
Q ss_pred ceeEEccceEEEec-CC----CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 173 FGEVHLKVSSIRDS-KS----DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 173 ~G~I~L~~ssi~~~-~~----d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
.|+|+|......+. .. ....|.|.++.|+|+|+|+|++||++||.||+.+
T Consensus 44 ~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi~al~k~ 98 (98)
T cd01244 44 SALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPVEATDWLNALEKQ 98 (98)
T ss_pred eeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHHHHHHHHHHHhcC
Confidence 79999987644322 11 2357999999999999999999999999999863
No 25
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.50 E-value=1.9e-13 Score=122.12 Aligned_cols=96 Identities=16% Similarity=0.197 Sum_probs=79.4
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
.++|||.|.+...++||+|||.|-+++|-|++.+.. - .....+++
T Consensus 3 ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~-------~----------------------------~~~~y~~~ 47 (101)
T cd01219 3 LKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKM-------I----------------------------GGSKFKVR 47 (101)
T ss_pred ccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccc-------c----------------------------CCCcEEEE
Confidence 479999999999999999999998889999996410 0 01223466
Q ss_pred eeEEccceEEEecC--CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSK--SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 174 G~I~L~~ssi~~~~--~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
+.|+|....|.... ...+.|.|.+..|+|+|.|+|++|+.+||+||+.|++
T Consensus 48 ~~i~l~~~~v~~~~~~~~~~~F~I~~~~rsf~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 48 ARIDVSGMQVCEGDNLERPHSFLVSGKQRCLELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred EEEecccEEEEeCCCCCcCceEEEecCCcEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 99999998887542 2368899999999999999999999999999999975
No 26
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.47 E-value=1.7e-13 Score=126.30 Aligned_cols=92 Identities=22% Similarity=0.416 Sum_probs=69.4
Q ss_pred cEEEEEEe-e-cCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCC
Q 006586 94 GISGVLYK-W-VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (639)
Q Consensus 94 ~~~G~L~K-~-~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (639)
...|||.- + ++..|.|+||||||+++.|+||+.+.+ .....
T Consensus 2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d-------------------------------------~~~~~ 44 (122)
T cd01263 2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDD-------------------------------------EKRKG 44 (122)
T ss_pred ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCc-------------------------------------cccCC
Confidence 46799984 3 578899999999999999999997521 11234
Q ss_pred CceeEEccceEEEec-------CCCCCcEEEEe--CC-----------------eE-EEEEcCCHHHHHHHHHHHHHH
Q 006586 172 PFGEVHLKVSSIRDS-------KSDDKRFSIFT--GT-----------------KR-LHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 172 p~G~I~L~~ssi~~~-------~~d~~~F~I~t--~~-----------------kt-~~L~AeS~edr~~WI~AL~~a 222 (639)
|.|.|+|..|.+... ....+.|.|.+ ++ |+ +.|.|+|++||++||.||+.|
T Consensus 45 Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 45 PTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRPKMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred ceEEEEhhhCcccccccCChhhcCCCCeEEEEEecccccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 889999999876533 22356788743 21 33 568999999999999999864
No 27
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.45 E-value=2.9e-13 Score=121.11 Aligned_cols=81 Identities=26% Similarity=0.559 Sum_probs=63.8
Q ss_pred CCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCceeEEccceEEE
Q 006586 105 YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIR 184 (639)
Q Consensus 105 ~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi~ 184 (639)
..|+||+|||+|+++.|+|||++. + ....|.+.|+|++|.|.
T Consensus 16 ~~K~~KrrwF~lk~~~L~YyK~ke--------e------------------------------~~~~p~i~lnl~gcev~ 57 (106)
T cd01237 16 TLKGYKQYWFTFRDTSISYYKSKE--------D------------------------------SNGAPIGQLNLKGCEVT 57 (106)
T ss_pred hhhhheeEEEEEeCCEEEEEccch--------h------------------------------cCCCCeEEEecCceEEc
Confidence 368899999999999999999862 1 12346788899999887
Q ss_pred ecCC-CCCcEE--EEeCC----eEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 185 DSKS-DDKRFS--IFTGT----KRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 185 ~~~~-d~~~F~--I~t~~----kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
++.. ....|. +.++. |+|+|+|+|++++++||+|++.|.
T Consensus 58 ~dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya~Wmaa~rlas 103 (106)
T cd01237 58 PDVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYAKWMAACRLAS 103 (106)
T ss_pred ccccccccceEEEEecCCccCCeEEEEECCCHHHHHHHHHHHHHhh
Confidence 6541 133455 45555 999999999999999999999874
No 28
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.41 E-value=5.8e-13 Score=135.25 Aligned_cols=96 Identities=26% Similarity=0.511 Sum_probs=77.4
Q ss_pred CCcEEEEEEeecC-CCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCC
Q 006586 92 GNGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (639)
Q Consensus 92 ~~~~~G~L~K~~n-~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (639)
.+..+|||.|.++ ..|.||||||+|.+++||||.--.+ .
T Consensus 259 npdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tTD----------------------------------------K 298 (395)
T KOG0930|consen 259 NPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTTD----------------------------------------K 298 (395)
T ss_pred CccccceeeeecCCcccchhheeEEeecceeeeeeeccC----------------------------------------C
Confidence 4679999999965 7899999999999999999986421 2
Q ss_pred CCceeEEccceEEEecCC--CCCcEEEEe----------------------CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 171 KPFGEVHLKVSSIRDSKS--DDKRFSIFT----------------------GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 171 kp~G~I~L~~ssi~~~~~--d~~~F~I~t----------------------~~kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
.|+|.|.|..-+|+.... .+.+|.|+. ....|.++|.+.+|+..||++|++++..-
T Consensus 299 EPrGIIpLeNlsir~VedP~kP~cfEly~ps~~gq~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is~~ 378 (395)
T KOG0930|consen 299 EPRGIIPLENLSIREVEDPKKPNCFELYIPSNKGQVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAISRD 378 (395)
T ss_pred CCCcceeccccceeeccCCCCCCeEEEecCCCCcCeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhccC
Confidence 277999999988886533 345666654 12569999999999999999999998855
Q ss_pred c
Q 006586 227 P 227 (639)
Q Consensus 227 ~ 227 (639)
|
T Consensus 379 P 379 (395)
T KOG0930|consen 379 P 379 (395)
T ss_pred c
Confidence 4
No 29
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.37 E-value=2.2e-12 Score=118.96 Aligned_cols=88 Identities=16% Similarity=0.399 Sum_probs=65.3
Q ss_pred EEEEEEeecCC-----C-C------------CceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhc
Q 006586 95 ISGVLYKWVNY-----G-K------------GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKR 156 (639)
Q Consensus 95 ~~G~L~K~~n~-----~-K------------gWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~ 156 (639)
++||++|+++. . . +|++|||||+++.|.||+++..
T Consensus 1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~~--------------------------- 53 (121)
T cd01254 1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPSS--------------------------- 53 (121)
T ss_pred CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCCC---------------------------
Confidence 47888888532 1 1 6999999999999999997521
Q ss_pred ccccccchhcccCCCCceeEEccce-EEEecC--------------CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 006586 157 KHKKETTSQRLLNRKPFGEVHLKVS-SIRDSK--------------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (639)
Q Consensus 157 ~~~~~~~~~~~~~~kp~G~I~L~~s-si~~~~--------------~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~ 221 (639)
.+|.|+|.|... .|.... ...+.|.|.++.|+|.|.|+|+.++.+||++|+.
T Consensus 54 -------------~~~~~vil~D~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~ 120 (121)
T cd01254 54 -------------AQILDVILFDVDFKVNGGGKEDISLAVELKDITGLRHGLKITNSNRSLKLKCKSSRKLKQWMASIED 120 (121)
T ss_pred -------------CceeeEEEEcCCccEEeCCcccccccccccccCCCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 124566666422 222211 2246789999999999999999999999999987
Q ss_pred H
Q 006586 222 V 222 (639)
Q Consensus 222 a 222 (639)
|
T Consensus 121 a 121 (121)
T cd01254 121 A 121 (121)
T ss_pred C
Confidence 5
No 30
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.37 E-value=7.9e-12 Score=105.85 Aligned_cols=93 Identities=32% Similarity=0.528 Sum_probs=76.8
Q ss_pred cEEEEEEeecC-CCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCC
Q 006586 94 GISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (639)
Q Consensus 94 ~~~G~L~K~~n-~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (639)
.++|||.++.. ....|++|||+|.++.|.||+.... .....+
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~-------------------------------------~~~~~~ 44 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKA-------------------------------------KKDYKP 44 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCc-------------------------------------cccCCC
Confidence 58999999986 6678999999999999999997521 001336
Q ss_pred ceeEEccceEEEecCC-----CCCcEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHH
Q 006586 173 FGEVHLKVSSIRDSKS-----DDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 173 ~G~I~L~~ssi~~~~~-----d~~~F~I~t~~k-t~~L~AeS~edr~~WI~AL~~a~ 223 (639)
.+.|+|..+.+..... ....|.|.++.+ +|+|+|+|++|+..|+.+|+.+.
T Consensus 45 ~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~~~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 45 KGSIDLSGITVREAPDPDSAKKPHCFEIKTADRRSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred ceEEECCcCEEEeCCCCccCCCceEEEEEecCCceEEEEcCCHHHHHHHHHHHHHhh
Confidence 6999999998776544 367899988887 99999999999999999999875
No 31
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.29 E-value=1.7e-11 Score=109.30 Aligned_cols=90 Identities=20% Similarity=0.309 Sum_probs=65.1
Q ss_pred EEEEEEeec--------CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhc
Q 006586 95 ISGVLYKWV--------NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (639)
Q Consensus 95 ~~G~L~K~~--------n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~ 166 (639)
++|||..+. ...+.|++|||||.++.|+||++++...
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~~----------------------------------- 45 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMAA----------------------------------- 45 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcccc-----------------------------------
Confidence 468888432 2466899999999999999999753100
Q ss_pred ccCCCCce--eEEccceEEEecCC---CCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 167 LLNRKPFG--EVHLKVSSIRDSKS---DDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 167 ~~~~kp~G--~I~L~~ssi~~~~~---d~~~F~I~t-~~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
..+.| .|+|..+.|....+ .+..|.|.+ +++.|+|+|+|.++++.||.||+.+
T Consensus 46 ---~~~~~~~~i~l~~~~i~~~~~~~k~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~aL~~~ 104 (104)
T cd01253 46 ---ENVHGEPPVDLTGAQCEVASDYTKKKHVFRLRLPDGAEFLFQAPDEEEMSSWVRALKSA 104 (104)
T ss_pred ---cCCCCCCcEeccCCEEEecCCcccCceEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 00113 67777776655432 346788864 5699999999999999999999863
No 32
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.23 E-value=8.2e-11 Score=104.97 Aligned_cols=93 Identities=20% Similarity=0.290 Sum_probs=68.8
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
..+|+|.|.+.. +.|+|+||.+.| +|-|+..... . ...-+++
T Consensus 3 ikEG~L~K~~~k-~~~~R~~FLFnD-~LlY~~~~~~-------~-----------------------------~~~y~~~ 44 (99)
T cd01220 3 IRQGCLLKLSKK-GLQQRMFFLFSD-LLLYTSKSPT-------D-----------------------------QNSFRIL 44 (99)
T ss_pred eeEEEEEEEeCC-CCceEEEEEccc-eEEEEEeecC-------C-----------------------------CceEEEE
Confidence 579999998763 356666665566 5555543210 0 0112366
Q ss_pred eeEEccceEEEecCC---CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSKS---DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 174 G~I~L~~ssi~~~~~---d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
|.|+|....|..... ..+.|.|.++.|.|.|.|.|++|+.+||++|+.|++
T Consensus 45 ~~i~L~~~~V~~~~~~~~~~~~F~I~~~~ks~~l~A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 45 GHLPLRGMLTEESEHEWGVPHCFTIFGGQCAITVAASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred EEEEcCceEEeeccCCcCCceeEEEEcCCeEEEEECCCHHHHHHHHHHHHHHhh
Confidence 999999998876443 257999999999999999999999999999999986
No 33
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.23 E-value=4.2e-11 Score=100.49 Aligned_cols=91 Identities=37% Similarity=0.625 Sum_probs=74.4
Q ss_pred EEEEEEeecCCC-CCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 95 ISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 95 ~~G~L~K~~n~~-KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
++|||.++.... ..|++|||+|.++.|.||+..... ....+.
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~-------------------------------------~~~~~~ 43 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSK-------------------------------------KSYKPK 43 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCC-------------------------------------cCCCCc
Confidence 479999987655 789999999999999999974210 013367
Q ss_pred eeEEccceEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~~-kt~~L~AeS~edr~~WI~AL~~a 222 (639)
+.|+|..+.+...... .+.|.|.+.. +.|+|+|+|.+|+..|+.+|+.+
T Consensus 44 ~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~l~~~ 96 (96)
T cd00821 44 GSIPLSGAEVEESPDDSGRKNCFEIRTPDGRSYLLQAESEEEREEWIEALQSA 96 (96)
T ss_pred ceEEcCCCEEEECCCcCCCCcEEEEecCCCcEEEEEeCCHHHHHHHHHHHhcC
Confidence 9999999888776553 6889998877 99999999999999999999864
No 34
>KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms]
Probab=99.20 E-value=1.2e-11 Score=133.26 Aligned_cols=93 Identities=40% Similarity=0.713 Sum_probs=85.0
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
.+.|+|.||.||..||+.|||||.+|.|+||++. .+++-| |+
T Consensus 25 e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse--------~E~~hG----------------------------cR-- 66 (611)
T KOG1739|consen 25 ERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSE--------DETEHG----------------------------CR-- 66 (611)
T ss_pred hhcceeeeeecccccccceEEEEcccchhhhhhh--------hhhhcc----------------------------cc--
Confidence 5899999999999999999999999999999986 333334 44
Q ss_pred eeEEccceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
|.|.|+.+.|.....|.++|.|.++...++|+|.+...++.|+++|+--+.
T Consensus 67 gsi~l~ka~i~ahEfDe~rfdIsvn~nv~~lra~~~~hr~~w~d~L~wmk~ 117 (611)
T KOG1739|consen 67 GSICLSKAVITAHEFDECRFDISVNDNVWYLRAQDPDHRQQWIDALEWMKT 117 (611)
T ss_pred eeeEeccCCcccccchhheeeeEeccceeeehhcCcHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999998776
No 35
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.10 E-value=8.5e-10 Score=93.24 Aligned_cols=87 Identities=31% Similarity=0.537 Sum_probs=69.3
Q ss_pred EEEEEeecCCC----CCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCC
Q 006586 96 SGVLYKWVNYG----KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (639)
Q Consensus 96 ~G~L~K~~n~~----KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (639)
+|||.+++... +.|++|||+|.++.|.||+.+.. ..
T Consensus 2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~----------------------------------------~~ 41 (99)
T cd00900 2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDK----------------------------------------KE 41 (99)
T ss_pred ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCC----------------------------------------Cc
Confidence 69999997654 68999999999999999997521 01
Q ss_pred Cc-eeEEccceEEEecCC---CCCcEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 172 PF-GEVHLKVSSIRDSKS---DDKRFSIFTG---TKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 172 p~-G~I~L~~ssi~~~~~---d~~~F~I~t~---~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
+. +.++|....+..... .+..|.|.+. .+.++|+|+|.+++..|+.||+.|
T Consensus 42 ~~~~~~~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 42 IKPGSIPLSEISVEEDPDGSDDPNCFAIVTKDRGRRVFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred CCCCEEEccceEEEECCCCCCCCceEEEECCCCCcEEEEEEcCCHHHHHHHHHHHhcC
Confidence 11 567777766655543 3688999887 899999999999999999999864
No 36
>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]
Probab=99.06 E-value=5.6e-11 Score=135.88 Aligned_cols=90 Identities=31% Similarity=0.486 Sum_probs=72.9
Q ss_pred cEEEEEEeecCCCCCceeeEEEE--eCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCC
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVL--QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL--~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (639)
+.+|||+|+|...|+||.||||| ....|+||... . ..+
T Consensus 1635 ~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~--------e--------------------------------dt~ 1674 (1732)
T KOG1090|consen 1635 IPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDF--------E--------------------------------DTK 1674 (1732)
T ss_pred CcccchhhcchhhcccccceeEecCCccceeeeccc--------c--------------------------------ccc
Confidence 45999999999999999999999 46889999974 1 134
Q ss_pred CceeEEccce-EEE---ecCCCC-CcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 172 PFGEVHLKVS-SIR---DSKSDD-KRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 172 p~G~I~L~~s-si~---~~~~d~-~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
|+|+|+|..- ++. +...|. ..|.+.|..|+|.|+|.+.-..++|++.||++.
T Consensus 1675 pkG~IdLaevesv~~~~~k~vdekgffdlktt~rvynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1675 PKGCIDLAEVESVALIGPKTVDEKGFFDLKTTNRVYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred ccchhhhhhhhhhcccCccccCccceeeeehhhHHHHHHhccchHHHHHHHHHHHhh
Confidence 7799999743 332 233344 456799999999999999999999999999875
No 37
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.91 E-value=1.4e-09 Score=113.83 Aligned_cols=99 Identities=27% Similarity=0.448 Sum_probs=72.8
Q ss_pred CcEEEEEEeecCCCCCceeeEEEE-eCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCC
Q 006586 93 NGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (639)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL-~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (639)
..++|||+|+|.+.|+||+|||+| .||.|.=||.+- ++. +....
T Consensus 15 vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP-------~~~----------------------------~~~p~ 59 (516)
T KOG0690|consen 15 VVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKP-------KEV----------------------------QPTPE 59 (516)
T ss_pred hHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCC-------ccC----------------------------CCCcc
Confidence 379999999999999999999999 789999999751 110 12223
Q ss_pred CceeEEccceEE-EecCCCCCcEEEEeC------CeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006586 172 PFGEVHLKVSSI-RDSKSDDKRFSIFTG------TKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (639)
Q Consensus 172 p~G~I~L~~ssi-~~~~~d~~~F~I~t~------~kt~~L~AeS~edr~~WI~AL~~a~~~~~~ 228 (639)
|..-..++.|.+ ...+..+..|.|.+- .||| .++|+++|++|++|||++.....+
T Consensus 60 pLNnF~v~~cq~m~~erPrPntFiiRcLQWTTVIERTF--~ves~~eRq~W~~AIq~vsn~l~q 121 (516)
T KOG0690|consen 60 PLNNFMVRDCQTMKTERPRPNTFIIRCLQWTTVIERTF--YVESAEERQEWIEAIQAVSNRLKQ 121 (516)
T ss_pred cccchhhhhhhhhhccCCCCceEEEEeeeeeeeeeeee--ecCCHHHHHHHHHHHHHHhhhhhh
Confidence 445555566533 234556788888653 3555 479999999999999999877654
No 38
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.91 E-value=1.2e-08 Score=93.75 Aligned_cols=99 Identities=15% Similarity=0.247 Sum_probs=70.7
Q ss_pred EEEEEEeec---------CC-CCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccch
Q 006586 95 ISGVLYKWV---------NY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (639)
Q Consensus 95 ~~G~L~K~~---------n~-~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~ 164 (639)
++|+|..+- .. ...|++||.||+++.|+.||++......
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~------------------------------- 50 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKS------------------------------- 50 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccc-------------------------------
Confidence 467777642 11 2479999999999999999986311000
Q ss_pred hcccCCCCceeEEccceEEEecC---CCCCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 165 QRLLNRKPFGEVHLKVSSIRDSK---SDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 165 ~~~~~~kp~G~I~L~~ssi~~~~---~d~~~F~I~t~-~kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
.........|.|..+.+.+.. ..+..|.|.++ ++.|.|+|.+.+|++.||.+|+.+.+.+
T Consensus 51 --~~~~~~~~~Isi~~a~~~ia~dy~Kr~~VF~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~~~ 114 (117)
T cd01230 51 --LSETELKNAISIHHALATRASDYSKKPHVFRLRTADWREFLFQTSSLKELQSWIERINVVAAAF 114 (117)
T ss_pred --cccccccceEEeccceeEeeccccCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 000112367788877644332 23578999987 4999999999999999999999999876
No 39
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.83 E-value=1.5e-08 Score=91.21 Aligned_cols=88 Identities=24% Similarity=0.278 Sum_probs=66.5
Q ss_pred CcEEEEEEeecCCCCCceeeEEEEeCC-eEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCC
Q 006586 93 NGISGVLYKWVNYGKGWRPRWFVLQDG-VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (639)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g-~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (639)
..++|++.|+.+.+ +|+|||+|.++ -|.|+...+ ..
T Consensus 13 Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~---------------------------------------~~-- 49 (104)
T PF14593_consen 13 ILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKK---------------------------------------MV-- 49 (104)
T ss_dssp EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTT---------------------------------------TE--
T ss_pred EEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCC---------------------------------------Ce--
Confidence 37899999998877 99999999887 888888531 01
Q ss_pred CceeEEccce-EEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 172 PFGEVHLKVS-SIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 172 p~G~I~L~~s-si~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
-+|+|++..+ .+. ..+...|.|.|++|+|+|.. ...+...|+++|+.++..+
T Consensus 50 ~KGeI~~~~~l~v~--~k~~~~F~I~tp~RtY~l~d-~~~~A~~W~~~I~~~~~~~ 102 (104)
T PF14593_consen 50 LKGEIPWSKELSVE--VKSFKTFFIHTPKRTYYLED-PEGNAQQWVEAIEEVKKQY 102 (104)
T ss_dssp EEEEE--STT-EEE--ECSSSEEEEEETTEEEEEE--TTS-HHHHHHHHHHHHHHH
T ss_pred ECcEEecCCceEEE--EccCCEEEEECCCcEEEEEC-CCCCHHHHHHHHHHHHHHh
Confidence 2399999855 333 34567999999999999987 4566888999999998754
No 40
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.82 E-value=2.5e-08 Score=87.77 Aligned_cols=89 Identities=29% Similarity=0.382 Sum_probs=69.0
Q ss_pred cEEEEEEeec-CCCC-CceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCC
Q 006586 94 GISGVLYKWV-NYGK-GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (639)
Q Consensus 94 ~~~G~L~K~~-n~~K-gWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (639)
+..|||.-.. +.+| |=|+|||||.+.+|+|||.. .| ..
T Consensus 2 irkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~--------ee--------------------------------KE 41 (110)
T cd01256 2 IRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDD--------EE--------------------------------KE 41 (110)
T ss_pred eeeeeEEeeccceecCCCcceEEEEecceeeeeccc--------cc--------------------------------cc
Confidence 6789998763 4445 48999999999999999975 22 11
Q ss_pred CceeEEccceEEEecCC----CCCcEEEEeC--------CeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 172 PFGEVHLKVSSIRDSKS----DDKRFSIFTG--------TKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 172 p~G~I~L~~ssi~~~~~----d~~~F~I~t~--------~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
|+|.|+|....++.... ....|.++.+ .|++.|.|+|.+|...|...+-.|
T Consensus 42 ~kyilpLdnLk~Rdve~gf~sk~~~FeLfnpd~rnvykd~k~lel~~~~~e~vdswkasflra 104 (110)
T cd01256 42 KKYMLPLDGLKLRDIEGGFMSRNHKFALFYPDGRNVYKDYKQLELGCETLEEVDSWKASFLRA 104 (110)
T ss_pred ccceeeccccEEEeecccccCCCcEEEEEcCcccccccchheeeecCCCHHHHHHHHHHHHhc
Confidence 66999999888875433 3467777753 478999999999999999887655
No 41
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.81 E-value=4.7e-08 Score=88.05 Aligned_cols=94 Identities=23% Similarity=0.237 Sum_probs=75.0
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
..+|-|.|.. .|+-+.|||.|=+++|-|-+.- ++ ...-+..
T Consensus 5 i~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~~~-----------------~~--------------------~~~~~~~ 45 (104)
T cd01218 5 VGEGVLTKMC--RKKPKQRQFFLFNDILVYGNIV-----------------IS--------------------KKKYNKQ 45 (104)
T ss_pred EecCcEEEee--cCCCceEEEEEecCEEEEEEee-----------------cC--------------------CceeeEe
Confidence 4799999987 6789999999988899996531 00 1112244
Q ss_pred eeEEccceEEEecCCC---CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 174 GEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
+.|+|....|....++ .+.|.|.++.|+|.+.|+|++|+.+||++|+.|++..
T Consensus 46 ~~i~L~~~~v~~~~d~~~~~n~f~I~~~~kSf~v~A~s~~eK~eWl~~i~~ai~~~ 101 (104)
T cd01218 46 HILPLEGVQVESIEDDGIERNGWIIKTPTKSFAVYAATETEKREWMLHINKCVTDL 101 (104)
T ss_pred eEEEccceEEEecCCcccccceEEEecCCeEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 8899998877654432 5899999999999999999999999999999999864
No 42
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.63 E-value=1.4e-07 Score=84.57 Aligned_cols=47 Identities=34% Similarity=0.519 Sum_probs=41.0
Q ss_pred eeEEccceEEEecCCCCCcEE--EEeCCe--EEEEEcCCHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSKSDDKRFS--IFTGTK--RLHLRAETREDRFAWMEALQ 220 (639)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~--I~t~~k--t~~L~AeS~edr~~WI~AL~ 220 (639)
-.|.|+.|+++..+..++||+ |.+.++ ++.|+|+|+.++..||+|+.
T Consensus 52 e~~~l~sc~~r~~~~~dRRFCFei~~~~~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 52 ETLTLKSCSRRKTESIDKRFCFDVEVEEKPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred eEEeeeeccccccCCccceeeEeeeecCCCCeEEEEecCHHHHHHHHHhhc
Confidence 357899999999888888877 666776 89999999999999999985
No 43
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.62 E-value=7.1e-08 Score=85.60 Aligned_cols=88 Identities=22% Similarity=0.417 Sum_probs=61.6
Q ss_pred EEEEEEeecC-CCCCceeeEEEEeCCeEEE------EEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcc
Q 006586 95 ISGVLYKWVN-YGKGWRPRWFVLQDGVLSY------YKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (639)
Q Consensus 95 ~~G~L~K~~n-~~KgWkrRWFVL~~g~LsY------YK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~ 167 (639)
.+|||+|.|+ ..|.||+|||||.+ +=-| |+.+
T Consensus 4 ~sGyL~k~Gg~~~KkWKKRwFvL~q-vsQYtfamcsy~ek---------------------------------------- 42 (117)
T cd01234 4 HCGYLYAIGKNVWKKWKKRFFVLVQ-VSQYTFAMCSYREK---------------------------------------- 42 (117)
T ss_pred eeEEEEeccchhhhhhheeEEEEEc-hhHHHHHHHhhhhh----------------------------------------
Confidence 7999999987 89999999999983 2222 3322
Q ss_pred cCCCCceeEEccceEEEecCC-------------CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 168 LNRKPFGEVHLKVSSIRDSKS-------------DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~~~~-------------d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
+..|.-.|.|.+-+|.-.+. ....|...-.+.++.+..+++.||+-||+||=.|..
T Consensus 43 -ks~P~e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~ff~avkegd~~~fa~~de~~r~lwvqa~yratg 111 (117)
T cd01234 43 -KAEPTEFIQLDGYTVDYMPESDPDPNSELSLQGGRHFFNAVKEGDELKFATDDENERHLWVQAMYRATG 111 (117)
T ss_pred -cCCchhheeecceEEeccCCCCCCcccccccccchhhhheeccCcEEEEeccchHHHHHHHHHHHHHcC
Confidence 22355566666666543211 123455556678899999999999999999987754
No 44
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=98.56 E-value=6.1e-07 Score=82.60 Aligned_cols=103 Identities=20% Similarity=0.333 Sum_probs=60.9
Q ss_pred EEEEEEeec-----C-----CCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccch
Q 006586 95 ISGVLYKWV-----N-----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (639)
Q Consensus 95 ~~G~L~K~~-----n-----~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~ 164 (639)
++|||+.+. + ...+|+.-|.||++++|+.||++.+.. ... ....
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~---------~~~-----------------~~~~ 55 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPA---------SST-----------------PPDI 55 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHC---------CT------------------BS--
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccc---------cCC-----------------cccc
Confidence 588988752 1 234699999999999999999842100 000 0000
Q ss_pred hcccCCCCceeEEccceEEEecC---CCCCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 165 QRLLNRKPFGEVHLKVSSIRDSK---SDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 165 ~~~~~~kp~G~I~L~~ssi~~~~---~d~~~F~I~t~-~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
......+|.+.|.|..|...... ..++.|.+.++ +..|.|+|.|.+||++||.+|+-+.
T Consensus 56 ~~~~~~~p~~~i~L~~a~a~~a~dY~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~A 118 (119)
T PF15410_consen 56 QSVENAKPDSSISLHHALAEIASDYTKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAA 118 (119)
T ss_dssp -SS--E-----EE-TT-EEEEETTBTTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred cccccCcceeEEEecceEEEeCcccccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhc
Confidence 00233457788999988766532 23678999886 6999999999999999999999775
No 45
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.49 E-value=5.3e-08 Score=114.34 Aligned_cols=98 Identities=31% Similarity=0.462 Sum_probs=80.1
Q ss_pred CCCcEEEEEEeec-CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccC
Q 006586 91 VGNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (639)
Q Consensus 91 ~~~~~~G~L~K~~-n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (639)
.+..+.|||+|+. +..+.|+||||-.+++.|.|+..-. +
T Consensus 272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~--------~-------------------------------- 311 (785)
T KOG0521|consen 272 LGYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGA--------D-------------------------------- 311 (785)
T ss_pred chhhhhhhhhhhcccchhhHHhhhhhhhccccccccccc--------c--------------------------------
Confidence 3457899999985 5688999999999999999998631 0
Q ss_pred CCCceeEEccceEEEecCCC-C--CcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006586 170 RKPFGEVHLKVSSIRDSKSD-D--KRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (639)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~d-~--~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~~~ 228 (639)
..+...++|..|+|+..+.. + ++|.|++++|+|+|+|+|+.|+++||.+|+..+.....
T Consensus 312 ~~~~~~~dL~~csvk~~~~~~drr~CF~iiS~tks~~lQAes~~d~~~Wi~~i~nsi~s~l~ 373 (785)
T KOG0521|consen 312 AENVLIEDLRTCSVKPDAEQRDRRFCFEIISPTKSYLLQAESEKDCQDWISALQNSILSALN 373 (785)
T ss_pred ccccccccchhccccCCcccccceeeEEEecCCcceEEecCchhHHHHHHHHHHHHHHHHHh
Confidence 00147889999999987664 4 45669999999999999999999999999999987654
No 46
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.47 E-value=1.7e-06 Score=79.10 Aligned_cols=99 Identities=24% Similarity=0.265 Sum_probs=65.9
Q ss_pred CCcEEEEEEe--ecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccC
Q 006586 92 GNGISGVLYK--WVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (639)
Q Consensus 92 ~~~~~G~L~K--~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (639)
|+.++|||.- .++..+||+++|.||.+..|+.|....+.+- ...
T Consensus 1 gt~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~----------------------------------~p~ 46 (122)
T cd01243 1 GTAYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRAS----------------------------------QPS 46 (122)
T ss_pred CccceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccC----------------------------------Ccc
Confidence 5689999964 3466689999999999999999997521100 000
Q ss_pred CCCceeEEccc-----eE------EEecCCC-CCcEEEEe-------CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 170 RKPFGEVHLKV-----SS------IRDSKSD-DKRFSIFT-------GTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 170 ~kp~G~I~L~~-----ss------i~~~~~d-~~~F~I~t-------~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
..|.=.|+|+. ++ |..++.| ++-|.|.+ +..+.+|-|+|..|++.|+.||.....
T Consensus 47 ~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l~~ 120 (122)
T cd01243 47 VVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSELHK 120 (122)
T ss_pred CceeEEEEcCCCCEEEEEecHHHccccCcccCCeEEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHHHh
Confidence 01122233321 11 1222333 67888865 358999999999999999999988654
No 47
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.33 E-value=3.7e-06 Score=75.93 Aligned_cols=92 Identities=20% Similarity=0.328 Sum_probs=63.3
Q ss_pred EEEEEEee--cCC--CCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCC
Q 006586 95 ISGVLYKW--VNY--GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (639)
Q Consensus 95 ~~G~L~K~--~n~--~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (639)
++|||.=- ++. .+||+++|.||.+..|..|....+. ...
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~-------------------------------------~~~ 44 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDK-------------------------------------ENS 44 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCccc-------------------------------------cCC
Confidence 78999654 344 3599999999999999999975210 001
Q ss_pred CCceeEEccc---------e-EEEecCCC-CCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 171 KPFGEVHLKV---------S-SIRDSKSD-DKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 171 kp~G~I~L~~---------s-si~~~~~d-~~~F~I~t~--~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
.|.-+++|.. + .+..++.| ++-|.|..+ .++.+|-|++..|++.|+.||..-+
T Consensus 45 ~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I~~~~~~~~lllLA~s~~ek~kWV~~L~~~~ 110 (112)
T cd01242 45 TPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQILYANEARDLLLLAPQTDEQNKWVSRLVKKI 110 (112)
T ss_pred CcEEEEEccceeeeecccHHHeeecCcccCCeEEEEEeCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence 1333343331 1 22333333 688998775 4999999999999999999998643
No 48
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.25 E-value=1.1e-05 Score=73.80 Aligned_cols=102 Identities=20% Similarity=0.262 Sum_probs=74.2
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
+.+|-|.|-+...+.++.|+|-|=|++|-|.|.... ..++.|.. ....+-+
T Consensus 5 I~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~-----------~~~~~g~~------------------~~~y~~k 55 (112)
T cd01261 5 IMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHG-----------QPRLPGAS------------------SAEYRLK 55 (112)
T ss_pred cccCcEEEEecccCCcceEEEEEecCeEEEEEeccC-----------cccccccc------------------cceEEEE
Confidence 578999998755577999999999999999996421 01111110 0122244
Q ss_pred eeEEccceEEEecCCC---CCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSKSD---DKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~-~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
+.|.|....|...++. .+.|.|.+. ++.|.|+|.|++++.+||++|..++.
T Consensus 56 ~~~~l~~~~V~d~~d~~~~knaF~I~~~~~~s~~l~Akt~eeK~~Wm~~l~~~~~ 110 (112)
T cd01261 56 EKFFMRKVDINDKPDSSEYKNAFEIILKDGNSVIFSAKNAEEKNNWMAALISVQT 110 (112)
T ss_pred EEEeeeeeEEEEcCCCcccCceEEEEcCCCCEEEEEECCHHHHHHHHHHHHHHhc
Confidence 7788887766543322 588999985 78999999999999999999998874
No 49
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.16 E-value=1.1e-05 Score=73.39 Aligned_cols=88 Identities=16% Similarity=0.305 Sum_probs=65.1
Q ss_pred EEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCce
Q 006586 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (639)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (639)
++|||.-.++.=+.|||+||+|+...|+||++... .++--
T Consensus 2 kEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~~----------------------------------------skyyK 41 (117)
T cd01239 2 KEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEESG----------------------------------------SRYYK 41 (117)
T ss_pred ccceEEEEecCccceeeeEEEecCCeEEEEEcCCC----------------------------------------CeeeE
Confidence 68999999999999999999999999999998421 12334
Q ss_pred eEEccce-EEEe-------cCCCCCcEEEEeCCeEEEEEcC--------------------CHHHHHHHHHHHHHH
Q 006586 175 EVHLKVS-SIRD-------SKSDDKRFSIFTGTKRLHLRAE--------------------TREDRFAWMEALQAV 222 (639)
Q Consensus 175 ~I~L~~s-si~~-------~~~d~~~F~I~t~~kt~~L~Ae--------------------S~edr~~WI~AL~~a 222 (639)
+|.|..- +|.. ....++.|.|.|+..+|++.++ ..+..+.|-.||+.|
T Consensus 42 eIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~~vY~VG~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 42 EIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTTNVYFVGGEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred EeehHHheEEeccCCCcCCCCCCCcEEEEEecCEEEEecccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence 4444422 2211 1346789999999999999764 345568899988864
No 50
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.10 E-value=1.1e-05 Score=70.48 Aligned_cols=86 Identities=16% Similarity=0.180 Sum_probs=65.0
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeC-CeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCC
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQD-GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~-g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (639)
.+.|.+.|+.++ -+|+|=|+|.| ..|.|+... ... -
T Consensus 2 l~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvdp~---------------------------------------~~~--~ 38 (89)
T cd01262 2 LKIGAVKKRKGL--FAKKRQLILTNGPRLIYVDPV---------------------------------------KKV--V 38 (89)
T ss_pred ceeeeeeehhcc--ccceeeEEEecCceEEEEcCC---------------------------------------cCe--E
Confidence 468999999876 47999999955 567777642 011 2
Q ss_pred ceeEEccceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
+|+|.+....+++.......|.|.|++|+|+|. +-.....+|+++|..+.
T Consensus 39 KgeIp~s~~~l~v~~~~~~~F~I~Tp~rty~le-D~~~~a~~W~~~I~~~~ 88 (89)
T cd01262 39 KGEIPWSDVELRVEVKNSSHFFVHTPNKVYSFE-DPKGRASQWKKAIEDLQ 88 (89)
T ss_pred EeEecccccceEEEEecCccEEEECCCceEEEE-CCCCCHHHHHHHHHHHh
Confidence 399999884444444456899999999999995 55688999999998864
No 51
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.10 E-value=7.3e-06 Score=74.18 Aligned_cols=92 Identities=22% Similarity=0.275 Sum_probs=61.2
Q ss_pred EEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCce
Q 006586 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (639)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G 174 (639)
++|+|+-+.--.|.||+|||+|+..-|+|+.+..- +..| +..|
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgks----------k~sr-----------------------dL~c---- 44 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEKT----------KNTR-----------------------DLAC---- 44 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCCc----------CCHH-----------------------HHHH----
Confidence 68999998777789999999999999999876311 1111 0000
Q ss_pred eEEccceEEE--------ecCCCCCcEEEEeC-------CeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 175 EVHLKVSSIR--------DSKSDDKRFSIFTG-------TKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 175 ~I~L~~ssi~--------~~~~d~~~F~I~t~-------~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
-..+....|- -....+..|+|..+ .-.-.|+|++++.+..||.||+-++
T Consensus 45 l~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~~q~~~s~~ik~lCaeDe~t~~~W~ta~Ri~K 108 (114)
T cd01259 45 LNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVGDQSKGSQSIKYLCAEDLPTLDRWLTAIRIAK 108 (114)
T ss_pred HHhcccCcEEEEechhhccCCCCCceEEEeccccCcccchhheeeccCCHHHHHHHHHHHHHHh
Confidence 0111111111 12345788888542 1346899999999999999999886
No 52
>KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=98.08 E-value=4.6e-06 Score=96.80 Aligned_cols=100 Identities=20% Similarity=0.447 Sum_probs=73.8
Q ss_pred cCCCcEEEEEEee--cCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcc
Q 006586 90 IVGNGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (639)
Q Consensus 90 ~~~~~~~G~L~K~--~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~ 167 (639)
.+.+...|||+-. +.-+..|.|||++|.+|++.|+|.+. | |
T Consensus 987 ~idVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~Pd--------D-E---------------------------- 1029 (1116)
T KOG3640|consen 987 AIDVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPD--------D-E---------------------------- 1029 (1116)
T ss_pred ccceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcc--------h-h----------------------------
Confidence 3445788999886 33344599999999999999999852 2 1
Q ss_pred cCCCCceeEEccceEEEe---cC----CCCCcEEEEe-------------CCe-EEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 168 LNRKPFGEVHLKVSSIRD---SK----SDDKRFSIFT-------------GTK-RLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~---~~----~d~~~F~I~t-------------~~k-t~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
+...|.|.|+|..|+-.. .. ..++.|.|.+ ..| ...|.|++.++++.|+.+|..+-...
T Consensus 1030 krK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~L 1109 (1116)
T KOG3640|consen 1030 KRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVWRPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQL 1109 (1116)
T ss_pred cccCcceeeehhhhhccccccchhhhccCCceeEEEeecccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHHH
Confidence 223488999999985432 22 2356788873 124 67899999999999999999986543
No 53
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=98.05 E-value=2.2e-06 Score=96.47 Aligned_cols=95 Identities=18% Similarity=0.396 Sum_probs=79.6
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
..+||+.|.+...|.|+|||||+++|..+||+.++.. ..+|.
T Consensus 250 ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~--------------------------------------~~~p~ 291 (936)
T KOG0248|consen 250 EKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNR--------------------------------------DEEPA 291 (936)
T ss_pred hcccchhcchHHHHHHHhHheeeccceEEEEEcCCCc--------------------------------------ccccc
Confidence 5789999999889999999999999999999997531 12355
Q ss_pred eeEEccceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 174 GEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
|.|++..-.+.+..+....|..++.+++|++.++|.---.+|+..|++++...
T Consensus 292 s~~d~~s~~~~~~~~~s~~fqli~~t~~~~~~~~s~~lt~dw~~iL~~~iKv~ 344 (936)
T KOG0248|consen 292 SKIDIRSVTKLEQQGAAYAFQLITSTDKMNFMTESERTTHDWVTILSAAIKAT 344 (936)
T ss_pred CcccccccceeeccchhHHhhhhhhceeEEEeccChhhhhhhHHHHHHHHHHH
Confidence 77777666666666667889999999999999999999999999999988654
No 54
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.74 E-value=6.1e-05 Score=84.46 Aligned_cols=96 Identities=20% Similarity=0.337 Sum_probs=62.5
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
...|||.|.+...+ |++|||.|.+|.+......++++- ....++.
T Consensus 378 ~~~G~l~k~~~~~~-wk~ry~~l~~~~l~~~~~~~~~~~----------------------------------~~~~~~~ 422 (478)
T PTZ00267 378 THGGYLYKYSSDMR-WKKRYFYIGNGQLRISLSENPEND----------------------------------GVAPKSV 422 (478)
T ss_pred ccceEEeccCCCcc-hhhheEEecCCceEEEeccccccC----------------------------------CCCCccc
Confidence 67999999988776 999999998877777655322110 0001111
Q ss_pred eeEEccceEEE-e--cCCCCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIR-D--SKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 174 G~I~L~~ssi~-~--~~~d~~~F~I~t-~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
....+..+... . ....+..|.|.+ ..+.+.+.|+|+++|..||.+||.|..
T Consensus 423 ~l~~~~~v~pv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 477 (478)
T PTZ00267 423 NLETVNDVFPVPEVYSQKHPNQLVLWFNNGQKIIAYAKTAEDRDQWISKFQRACG 477 (478)
T ss_pred cHHHhcccccccHHhcCCCCceEEEEecCCcEEEEecCChHHHHHHHHHHHHHhC
Confidence 11112222111 1 123467788755 578889999999999999999999863
No 55
>PLN02866 phospholipase D
Probab=97.52 E-value=0.00051 Score=82.31 Aligned_cols=109 Identities=17% Similarity=0.241 Sum_probs=70.9
Q ss_pred CcEEEEEEeec-----C------C---------CCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhh
Q 006586 93 NGISGVLYKWV-----N------Y---------GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRI 152 (639)
Q Consensus 93 ~~~~G~L~K~~-----n------~---------~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~ 152 (639)
..++||+.|+. + . ..+|++|||||+++.|.|.+++...++ .-||=-+..-
T Consensus 182 K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~---------~~v~lfD~~~- 251 (1068)
T PLN02866 182 KLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKP---------LDIIVFDVLP- 251 (1068)
T ss_pred CcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCce---------eEEEEEeccc-
Confidence 46899999992 1 0 135999999999999999987543222 1122111100
Q ss_pred hhhcccccccchhcccCCCCceeEEccceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 153 ISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
....+-.|.|.|..- +.+...-...|.|.+++|++.|+|.|.....+|+.+|+.+....
T Consensus 252 --------------~~~~~~~~~~~~~~~-~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~ 310 (1068)
T PLN02866 252 --------------ASNGNGEGQISLAKE-IKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRP 310 (1068)
T ss_pred --------------ccccCCCcceeeccc-ccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhcc
Confidence 001111244444322 12222335788999999999999999999999999999998544
No 56
>KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms]
Probab=97.51 E-value=4.4e-05 Score=84.82 Aligned_cols=98 Identities=26% Similarity=0.357 Sum_probs=69.6
Q ss_pred CCcEEEEEEee-c--CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhccc
Q 006586 92 GNGISGVLYKW-V--NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (639)
Q Consensus 92 ~~~~~G~L~K~-~--n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (639)
++.++|-|.-+ | .++|+|+.|||.|.+..|.|-|-+.++... .
T Consensus 734 qp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~--------~-------------------------- 779 (851)
T KOG3723|consen 734 QPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSD--------D-------------------------- 779 (851)
T ss_pred CchhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCC--------C--------------------------
Confidence 34678888643 3 468999999999999999998865432110 0
Q ss_pred CCCCceeEEccc-eEE------EecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006586 169 NRKPFGEVHLKV-SSI------RDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (639)
Q Consensus 169 ~~kp~G~I~L~~-ssi------~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~~~ 228 (639)
-.|+|.. -+| +..++-.+.|.|+|.++||.|+|.++....+|++.|+-|.+...+
T Consensus 780 -----~~IDl~~IRSVk~v~~kr~~rslpKAFEIFTAD~T~ILKaKDeKNAEEWlqCL~IavAHa~~ 841 (851)
T KOG3723|consen 780 -----CPIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIAVAHAKE 841 (851)
T ss_pred -----CCccHHHhhhHHHHHhhhhhcccchhhheeecCceEEeecccccCHHHHHHHHHHHHHHHHH
Confidence 0122211 011 112344678999999999999999999999999999998886643
No 57
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=97.50 E-value=0.00043 Score=80.07 Aligned_cols=96 Identities=19% Similarity=0.387 Sum_probs=61.6
Q ss_pred CcEEEEEEeecC-C-CCC-ceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccC
Q 006586 93 NGISGVLYKWVN-Y-GKG-WRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (639)
Q Consensus 93 ~~~~G~L~K~~n-~-~Kg-WkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (639)
..++|||+.-+. . +.. -++|||||++..|.|||.+-.++
T Consensus 4 ~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~-------------------------------------- 45 (719)
T PLN00188 4 VVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDN-------------------------------------- 45 (719)
T ss_pred ceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccc--------------------------------------
Confidence 469999999863 2 333 68999999999999999852111
Q ss_pred CCCceeEEccceEEEecCC----CCCcEE---EEe---CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 170 RKPFGEVHLKVSSIRDSKS----DDKRFS---IFT---GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~----d~~~F~---I~t---~~kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
-.|..+.-+..+.-.++.. ..+.|+ |.. ..+...|-|.+.+|..+||+||+.|++..
T Consensus 46 ~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 46 QVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred cccceeeccCCCceEeecCceEEcCceEEEEEEecCCCccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 1121111122111111110 123333 332 46889999999999999999999999954
No 58
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.49 E-value=4.8e-05 Score=84.77 Aligned_cols=37 Identities=32% Similarity=0.470 Sum_probs=31.8
Q ss_pred CCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 190 DKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 190 ~~~F~I~t~-~kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
+..|.|++. ..++||.|.+-+||++||+||+.-+...
T Consensus 445 de~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIlaS 482 (749)
T KOG0705|consen 445 DECFEIVSNTGQTWHFEATTYEERDAWVQAIQSQILAS 482 (749)
T ss_pred cceEEEeccccchhhhhhcchhhHHHHHHHHHHHHHHH
Confidence 457888776 5899999999999999999999987654
No 59
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.44 E-value=0.00097 Score=61.87 Aligned_cols=33 Identities=33% Similarity=0.479 Sum_probs=29.2
Q ss_pred CcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 191 KRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 191 ~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
..|.|.++.|++.|.|.|.++.+-|+.||+-..
T Consensus 89 ~si~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~ 121 (123)
T PF12814_consen 89 KSIIIVTPDRSLDLTAPSRERHEIWFNALRYLL 121 (123)
T ss_pred eEEEEEcCCeEEEEEeCCHHHHHHHHHHHHHHh
Confidence 455678999999999999999999999998754
No 60
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.35 E-value=0.00052 Score=62.32 Aligned_cols=90 Identities=30% Similarity=0.456 Sum_probs=59.6
Q ss_pred EEEEeecC----CCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCC
Q 006586 97 GVLYKWVN----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (639)
Q Consensus 97 G~L~K~~n----~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (639)
|||..+.. ..+.||+|+++|+++-|..|+.. |. +.+ . +.+ |
T Consensus 3 GW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~-P~----s~e--~------------w~~----------------p 47 (108)
T cd01258 3 GWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETP-PL----SVE--D------------WSR----------------P 47 (108)
T ss_pred eecccccCCCCccccccceEEEEEcCCcEEEEeCC-CC----CHH--H------------HhC----------------h
Confidence 89988843 34789999999999999999984 11 011 0 000 1
Q ss_pred ceeEEcc-----ceEE----EecCCCCCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHH
Q 006586 173 FGEVHLK-----VSSI----RDSKSDDKRFSIFTGT--KRLHLRAETREDRFAWMEALQA 221 (639)
Q Consensus 173 ~G~I~L~-----~ssi----~~~~~d~~~F~I~t~~--kt~~L~AeS~edr~~WI~AL~~ 221 (639)
.-..+|- .... ......+..|.|.+++ ...+|+.|+..|+..|..||+.
T Consensus 48 ~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irtg~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 48 LYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRTGTQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred hhhChhHHhhhheeccCCccCcCCCCceEEEEEcCCceeeEEEEecCHHHHHHHHHHHhc
Confidence 1111111 0000 0012446789999987 6899999999999999999974
No 61
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.27 E-value=0.00038 Score=79.47 Aligned_cols=81 Identities=22% Similarity=0.380 Sum_probs=63.4
Q ss_pred CCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCceeEEccceE-EE-
Q 006586 107 KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSS-IR- 184 (639)
Q Consensus 107 KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~I~L~~ss-i~- 184 (639)
+.+|+|||-|.+..|+|-|+++ ++|.+.|.|..-- +.
T Consensus 584 ~~FKKryf~LT~~~Ls~~Ksp~-----------------------------------------~q~~~~Ipl~nI~avEk 622 (800)
T KOG2059|consen 584 KNFKKRYFRLTTEELSYAKSPG-----------------------------------------KQPIYTIPLSNIRAVEK 622 (800)
T ss_pred hhhhheEEEeccceeEEecCCc-----------------------------------------cCcccceeHHHHHHHHH
Confidence 4578999999999999999853 3466888886431 11
Q ss_pred --ec-CCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006586 185 --DS-KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (639)
Q Consensus 185 --~~-~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~~~ 228 (639)
+. =...+.|.|+..+|+++|+|.+-.|..+|+.||..+..+.+.
T Consensus 623 lee~sF~~knv~qVV~~drtly~Q~~n~vEandWldaL~kvs~~N~~ 669 (800)
T KOG2059|consen 623 LEEKSFKMKNVFQVVHTDRTLYVQAKNCVEANDWLDALRKVSCCNQN 669 (800)
T ss_pred hhhhccCCCceEEEEecCcceeEecCCchHHHHHHHHHHHHhccCcc
Confidence 11 123678999999999999999999999999999998776543
No 62
>KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms]
Probab=97.27 E-value=0.00046 Score=76.54 Aligned_cols=98 Identities=24% Similarity=0.341 Sum_probs=65.3
Q ss_pred cCCCcEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccC
Q 006586 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (639)
Q Consensus 90 ~~~~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~ 169 (639)
...+.++|+||-+.--.|+|||-||||+..-|||+.+... ++-| +..
T Consensus 314 ~~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~ts----------k~~r-----------------------~Lq 360 (622)
T KOG3751|consen 314 SSPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTS----------KEPR-----------------------HLQ 360 (622)
T ss_pred CCCccccceeeecccccccceeEEEEEecCcceEccCCCC----------CCch-----------------------hhH
Confidence 4567899999999888899999999999999999875311 1111 000
Q ss_pred CCCceeEEccceEEEe--------cCCCCCcEEEEeC-----CeE-EEEEcCCHHHHHHHHHHHHHHHH
Q 006586 170 RKPFGEVHLKVSSIRD--------SKSDDKRFSIFTG-----TKR-LHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 170 ~kp~G~I~L~~ssi~~--------~~~d~~~F~I~t~-----~kt-~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
|. -+|..+.|.. ....+..|+|... +|- =.|+|+++..+..|+.||+-++-
T Consensus 361 ~l----~~~~~snVYt~i~~rKkyksPTd~~f~~K~~~~~~~~r~lk~lCAEDe~t~~~WltAiRl~Ky 425 (622)
T KOG3751|consen 361 CL----ADLHSSNVYTGIGGRKKYKSPTDYGFCIKPNKLRNKRRFLKMLCAEDEQTRTCWLTAIRLLKY 425 (622)
T ss_pred HH----HhcccCceEEeecchhccCCCCCceEEeeeccccCcccceeeeecccchhHHHHHHHHHHHHH
Confidence 00 0011111111 1234788888642 232 37899999999999999998874
No 63
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.20 E-value=0.0043 Score=55.41 Aligned_cols=87 Identities=18% Similarity=0.214 Sum_probs=62.8
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
.++|.|.-++. =+.|+.-|=+.+|-|.|..+. ...-+
T Consensus 5 lleg~l~~~~~----~~eR~vFLFe~~ll~~K~~~~---------------------------------------~y~~K 41 (97)
T cd01222 5 LLEGRFREHGG----GKPRLLFLFQTMLLIAKPRGD---------------------------------------KYQFK 41 (97)
T ss_pred eeeceEEeecC----CCceEEEEecccEEEEEecCC---------------------------------------eeEEE
Confidence 47888875443 346888888899999887531 01122
Q ss_pred eeEEccceEEEecC-CCCCcEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSK-SDDKRFSIFTGT---KRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 174 G~I~L~~ssi~~~~-~d~~~F~I~t~~---kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
..|.+..-.|.++. .++++|.|...+ +.|.|+|.|.++++.||++|+.++
T Consensus 42 ~~i~~~~l~i~e~~~~d~~~F~v~~~~~p~~~~~l~A~s~e~K~~W~~~i~~~i 95 (97)
T cd01222 42 AYIPCKNLMLVEHLPGEPLCFRVIPFDDPKGALQLTARNREEKRIWTQQLKRAM 95 (97)
T ss_pred EEEEecceEEecCCCCCCcEEEEEecCCCceEEEEEecCHHHHHHHHHHHHHHh
Confidence 56666655555543 468999996643 799999999999999999999875
No 64
>KOG1451 consensus Oligophrenin-1 and related Rho GTPase-activating proteins [Signal transduction mechanisms]
Probab=97.07 E-value=0.0015 Score=73.21 Aligned_cols=98 Identities=23% Similarity=0.333 Sum_probs=68.8
Q ss_pred CCCcEEEEEEee--cCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhccc
Q 006586 91 VGNGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (639)
Q Consensus 91 ~~~~~~G~L~K~--~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (639)
.+.+++||||-+ ..+++.|-+-|+|.+...-.+--.... +. . ..
T Consensus 263 ~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~------qk--~--------------------------g~ 308 (812)
T KOG1451|consen 263 TPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPAN------QK--T--------------------------GT 308 (812)
T ss_pred CCcccceeeeehhhhhccchhhhheeEeecccceEEEeecc------cC--C--------------------------CC
Confidence 446899999987 568899999999874432222111100 00 0 11
Q ss_pred CCCCceeEEccceEEEecCCCCCcEE--EEeCC--eEEEEEcCCHHHHHHHHHHHHHH
Q 006586 169 NRKPFGEVHLKVSSIRDSKSDDKRFS--IFTGT--KRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~~d~~~F~--I~t~~--kt~~L~AeS~edr~~WI~AL~~a 222 (639)
...+..++.|+.|+-+..++-++||| |.+.. -+.+++|-|++||..||+|+-.+
T Consensus 309 k~g~~~~~~lKsC~RRktdSIdKRFCFDve~~erpgviTmQALSE~drrlWmeAMDG~ 366 (812)
T KOG1451|consen 309 KMGQTATFKLKSCSRRKTDSIDKRFCFDVEVEERPGVITMQALSEKDRRLWMEAMDGA 366 (812)
T ss_pred cCCCcceEEehhhccCcccccccceeeeeeecccCCeeehHhhhhhHHHHHHHHhcCC
Confidence 12255778999999887777788888 45544 58999999999999999998876
No 65
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.06 E-value=0.0072 Score=55.02 Aligned_cols=93 Identities=15% Similarity=0.244 Sum_probs=67.4
Q ss_pred cEEEEEEeecCCCCCc-eeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCC
Q 006586 94 GISGVLYKWVNYGKGW-RPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgW-krRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (639)
+++|-|.+.+ ..+|| +.|.|-|=|+.|-|.|..-. | .....-
T Consensus 3 i~~Gel~~~s-~~~g~~q~R~~FLFD~~LI~CKkd~~-------------r-----------------------~~~~~y 45 (109)
T cd01224 3 FLQGEATRQK-QNKGWNSSRVLFLFDHQMVLCKKDLI-------------R-----------------------RDHLYY 45 (109)
T ss_pred eEeeeEEEEe-cccCCcccEEEEEecceEEEEecccc-------------c-----------------------CCcEEE
Confidence 5789998876 33455 56999999999999995200 0 011223
Q ss_pred ceeEEccceEEEecCCC---------CCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 173 FGEVHLKVSSIRDSKSD---------DKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 173 ~G~I~L~~ssi~~~~~d---------~~~F~I~t~--~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
+|.|.|..+.|...++. .+.|.|+.. .+.|.|.|.|+++.+.||+||..-+
T Consensus 46 Kgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~~~~~~~f~~Kt~e~K~~Wm~a~~~er 107 (109)
T cd01224 46 KGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSESTDEWYLFSFKSAERKHRWLSAFALER 107 (109)
T ss_pred EEEEEcccEEEEECCCCccccCCceeEEEEEEEEcCCCeEEEEEECCHHHHHHHHHHHHHhh
Confidence 49999999888754322 246788765 4789999999999999999998654
No 66
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.01 E-value=0.0031 Score=70.55 Aligned_cols=106 Identities=21% Similarity=0.336 Sum_probs=66.2
Q ss_pred CCCcEEEEEEeec---------CCC-CCceeeEEEEeCCeEEEEEecCC-Cccccchhhcccceeeccchhhhhhhcccc
Q 006586 91 VGNGISGVLYKWV---------NYG-KGWRPRWFVLQDGVLSYYKIHGP-DKIIVSEETERGCKVIGEESTRIISKRKHK 159 (639)
Q Consensus 91 ~~~~~~G~L~K~~---------n~~-KgWkrRWFVL~~g~LsYYK~~~~-~~~~~~~e~~~~~rvig~~~~~~~~~~~~~ 159 (639)
+.+-+.|+|..+. -.+ .|||.-|-||++-+||+-|++-. ++...-.+ ++.
T Consensus 504 a~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kalse~~---------------lkn---- 564 (774)
T KOG0932|consen 504 AATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALSESD---------------LKN---- 564 (774)
T ss_pred chhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchhhhh---------------hhh----
Confidence 4456889887653 233 36999999999999888886432 11110000 000
Q ss_pred cccchhcccCCCCceeEEccceEEEec-CCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006586 160 KETTSQRLLNRKPFGEVHLKVSSIRDS-KSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (639)
Q Consensus 160 ~~~~~~~~~~~kp~G~I~L~~ssi~~~-~~d~~~F~I~t~~-kt~~L~AeS~edr~~WI~AL~~a~~~~~~ 228 (639)
+. .||=..++-..+ ....+.|.+.|.+ |.|.|+|.+.++|+.||..|.-+.+.|.-
T Consensus 565 ------------av-svHHALAt~AtdY~KKp~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA~fSa 622 (774)
T KOG0932|consen 565 ------------AV-SVHHALATPATDYSKKPHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVAAAFSA 622 (774)
T ss_pred ------------hh-hhhhhhcCCCcccccCCceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHHhccC
Confidence 00 011111111111 1235788898875 99999999999999999999999998853
No 67
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.95 E-value=0.0026 Score=59.31 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=50.2
Q ss_pred ceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCceeEEccceEEEe---
Q 006586 109 WRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD--- 185 (639)
Q Consensus 109 WkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi~~--- 185 (639)
-+.||+-|=+++|-|-|.+..++..| +. .-|++.|.+..+....
T Consensus 27 ~~~vylfLFnDlLl~tkkK~~~~f~V----------~d-----------------------y~~r~~l~V~~~e~~~~~~ 73 (125)
T cd01221 27 ARTIYLFLFNDLLLITKKKLGSTFVV----------FD-----------------------YAPRSFLRVEKIEPDNQKI 73 (125)
T ss_pred CCcEEEEEecceEEEEEecCCCeEEE----------Ee-----------------------eccccceEEeecccccccc
Confidence 45789999999999999865433332 11 0122333333221110
Q ss_pred -----cCCCCCcEEEE------eCCeEEEEEcCCHHHHHHHHHHHH
Q 006586 186 -----SKSDDKRFSIF------TGTKRLHLRAETREDRFAWMEALQ 220 (639)
Q Consensus 186 -----~~~d~~~F~I~------t~~kt~~L~AeS~edr~~WI~AL~ 220 (639)
.....+.|.|. ..++.+.|+|+|+.|+.+||+||.
T Consensus 74 ~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al~ 119 (125)
T cd01221 74 PLGSNLVGRPNLFLLTLLRNADDKQAELLLSADSQSDRERWLSALA 119 (125)
T ss_pred cccccccCCCceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhcC
Confidence 11346778875 234789999999999999999984
No 68
>PF15406 PH_6: Pleckstrin homology domain
Probab=96.77 E-value=0.0032 Score=56.90 Aligned_cols=51 Identities=22% Similarity=0.364 Sum_probs=41.5
Q ss_pred CCCceeEEccceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 006586 170 RKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (639)
Q Consensus 170 ~kp~G~I~L~~ssi~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~ 221 (639)
..|.|.|+|...+-. .++....|.+...+....|+|.|..||+.||.+|+.
T Consensus 61 a~P~GiinLadase~-~~~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk~ 111 (112)
T PF15406_consen 61 ASPSGIINLADASEP-EKDGSNKFHFKIKGHKHTFEAASAAERDNWVAQLKA 111 (112)
T ss_pred cCCcceEehhhcccc-ccCCCceEEEEeCCceeeeecCCHHHhccHHHHhhc
Confidence 358899999765322 244678899888999999999999999999999864
No 69
>PF15404 PH_4: Pleckstrin homology domain
Probab=96.42 E-value=0.021 Score=56.78 Aligned_cols=32 Identities=25% Similarity=0.467 Sum_probs=29.3
Q ss_pred EEEEEEeecCCCCCceeeEEEEeCCeEEEEEe
Q 006586 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKI 126 (639)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~ 126 (639)
++|+||.+.+....|+++++||-.|.|--|+.
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~ 32 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQL 32 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEE
Confidence 57999999988889999999999999988886
No 70
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=96.30 E-value=0.0036 Score=56.56 Aligned_cols=92 Identities=17% Similarity=0.272 Sum_probs=60.4
Q ss_pred cEEEEEEeecCCC-CCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCC
Q 006586 94 GISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (639)
Q Consensus 94 ~~~G~L~K~~n~~-KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (639)
++.||+.|-|+-+ ..|++|||-|-.+.|-+|-..+..+.
T Consensus 4 IvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~~~~---------------------------------------- 43 (116)
T cd01240 4 IVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEANKP---------------------------------------- 43 (116)
T ss_pred EEeeehhhhCCHHHHHHHHHHheeCcceeeecccccccCC----------------------------------------
Confidence 7899999998765 45999999999888888643211000
Q ss_pred ceeEEcc----ce-EEEecCCCCCcEEE-EeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006586 173 FGEVHLK----VS-SIRDSKSDDKRFSI-FTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (639)
Q Consensus 173 ~G~I~L~----~s-si~~~~~d~~~F~I-~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~~ 227 (639)
--|.+. +| .....+ .+++..| .-+++.|.|+++++-+..+|...|+.|-....
T Consensus 44 -eLi~M~~i~~V~~e~~~iK-~~~CI~ik~k~~~k~vlt~~d~i~l~qW~~elr~a~r~Sq 102 (116)
T cd01240 44 -ELITMDQIEDVSVEFQQIK-EENCILLKIRDEKKIVLTNSDEIELKQWKKELRDAHRESQ 102 (116)
T ss_pred -cEEEeehhhhcchhheeec-cCceEEEEEcCCceEEEecCCcHHHHHHHHHHHHHHHHHH
Confidence 111111 11 000112 3344444 44678999999999999999999998866543
No 71
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=96.19 E-value=0.0073 Score=68.09 Aligned_cols=100 Identities=16% Similarity=0.249 Sum_probs=75.2
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
+++|-|+|.+.....-+.||.+|=+.+|-|.+-+- |+- .....++
T Consensus 273 iKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~--------------~~~---------------------~~k~~~r 317 (623)
T KOG4424|consen 273 IKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRK--------------RLP---------------------GSKYEVR 317 (623)
T ss_pred hhccceeeeeccCCCcceeEEEEehhHHHhhhhhh--------------hcc---------------------cceeccc
Confidence 68999999987777899999999999999988541 100 1111233
Q ss_pred eeEEccceEEEecCCC--CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 006586 174 GEVHLKVSSIRDSKSD--DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (639)
Q Consensus 174 G~I~L~~ssi~~~~~d--~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~~~ 228 (639)
-.+.+..+.+..+... .+.|.+....|.+.|+|.|.++..+||++|+.+++.+..
T Consensus 318 ~~~s~~~~~v~~~~~~~~~~tF~~~G~~r~vel~a~t~~ek~eWv~~I~~~Id~~kq 374 (623)
T KOG4424|consen 318 ARCSISHMQVQEDDNEELPHTFILTGKKRGVELQARTEQEKKEWVQAIQDAIDKHKQ 374 (623)
T ss_pred eeeccCcchhcccccccCCceEEEecccceEEeecCchhhHHHHHHHHHHHHHHHHH
Confidence 4445555544444333 678988888999999999999999999999999998753
No 72
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=95.73 E-value=0.0043 Score=72.29 Aligned_cols=95 Identities=23% Similarity=0.375 Sum_probs=74.0
Q ss_pred cCCCcEEEEEEeecCCCCC-ceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhccc
Q 006586 90 IVGNGISGVLYKWVNYGKG-WRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (639)
Q Consensus 90 ~~~~~~~G~L~K~~n~~Kg-WkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~ 168 (639)
+....+.|||.|-.--+.. .++||.-++...|.||....+
T Consensus 84 isp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k~--------------------------------------- 124 (1186)
T KOG1117|consen 84 ISPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPKD--------------------------------------- 124 (1186)
T ss_pred cCchhhcchhhccCcCcccccCccceecCCCCccccCCCCC---------------------------------------
Confidence 3346899999997543332 899999999999999997521
Q ss_pred CCCCceeEEccceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006586 169 NRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (639)
Q Consensus 169 ~~kp~G~I~L~~ssi~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~ 225 (639)
.-+.|.|.|...+... ...+..|.++++.|+|.+++++..++..|+..++++...
T Consensus 125 -py~k~~i~va~is~v~-~~gd~kfevitn~r~fvfr~e~~~~r~~w~s~l~s~~~~ 179 (1186)
T KOG1117|consen 125 -PYSKGPIPVAAISAVR-NFGDNKFEVITNQRTFVFRQESEGERFIWVSPLQSALKE 179 (1186)
T ss_pred -CCCCCceeeehhhhhh-hccCceEEEEecceEEEEecCCcccceeeechhhhcchh
Confidence 1234777776543322 346889999999999999999999999999999998654
No 73
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]
Probab=95.54 E-value=0.0037 Score=70.55 Aligned_cols=92 Identities=21% Similarity=0.373 Sum_probs=63.0
Q ss_pred cEEEEEEeec-CCCCCceeeEEEEeCC-----eEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcc
Q 006586 94 GISGVLYKWV-NYGKGWRPRWFVLQDG-----VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (639)
Q Consensus 94 ~~~G~L~K~~-n~~KgWkrRWFVL~~g-----~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~ 167 (639)
..+||||--+ |.+|.||+|||||-.- .+.-|+.+
T Consensus 465 khsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyrek---------------------------------------- 504 (1218)
T KOG3543|consen 465 KHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYREK---------------------------------------- 504 (1218)
T ss_pred ccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhhc----------------------------------------
Confidence 5789999886 6789999999999321 12222321
Q ss_pred cCCCCceeEEccceEEEecCCC------CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 168 LNRKPFGEVHLKVSSIRDSKSD------DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 168 ~~~kp~G~I~L~~ssi~~~~~d------~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
...|.--|.|.+-+|...+.. ...|.-+..+.+..|..+++.||.-|++|+-.|....
T Consensus 505 -kaepqel~qldgytvdytdp~pglqgg~~ffnavkegdtvifasddeqdr~lwvqamyratgqs 568 (1218)
T KOG3543|consen 505 -KAEPQELIQLDGYTVDYTDPSPGLQGGKHFFNAVKEGDTVIFASDDEQDRHLWVQAMYRATGQS 568 (1218)
T ss_pred -ccChHHHhhccCeeeccCCCCCccccchHHHHHhccCceEEeccCchhhhhHHHHHHHHhhCCc
Confidence 122445677777776543221 2345555667889999999999999999998876544
No 74
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=95.51 E-value=0.057 Score=63.40 Aligned_cols=89 Identities=24% Similarity=0.390 Sum_probs=63.3
Q ss_pred cEEEEEEeecCCCC----------CceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccc
Q 006586 94 GISGVLYKWVNYGK----------GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (639)
Q Consensus 94 ~~~G~L~K~~n~~K----------gWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~ 163 (639)
...|+||+.-...+ --.++|+||.+|.|+||....
T Consensus 493 ~~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~----------------------------------- 537 (1186)
T KOG1117|consen 493 FLCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEK----------------------------------- 537 (1186)
T ss_pred cccceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcC-----------------------------------
Confidence 58899999743221 245799999999999999741
Q ss_pred hhcccCCCCceeEEccce-EEEecCCCC-------CcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 164 SQRLLNRKPFGEVHLKVS-SIRDSKSDD-------KRFSIFT-GTKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 164 ~~~~~~~kp~G~I~L~~s-si~~~~~d~-------~~F~I~t-~~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
...|.|.|+...- .+.+.+.+. ..|.|.. +.|.|++-+++++....|..|+...
T Consensus 538 -----S~tP~~lI~~~Eivclav~~pd~~pn~~~~f~fE~~l~~er~~~fgle~ad~l~~wt~aiaKh 600 (1186)
T KOG1117|consen 538 -----STTPNGLININEIVCLAVHPPDTYPNTGFIFIFEIYLPGERVFLFGLETADALRKWTEAIAKH 600 (1186)
T ss_pred -----CCCCCceeeccceEEEeecCCCCCCCcCceeEEEEeecccceEEeecccHHHHHHHHHHHHHh
Confidence 2337799988643 222333332 2455655 5799999999999999999998653
No 75
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=95.34 E-value=0.0073 Score=70.35 Aligned_cols=95 Identities=24% Similarity=0.404 Sum_probs=72.0
Q ss_pred CcEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCC
Q 006586 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (639)
Q Consensus 93 ~~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp 172 (639)
..+.|||..+-..-.||++=|.|..+-+|++||++. |. -|
T Consensus 924 ~qLsg~LlrkfknssgwqkLwvvft~fcl~fyKS~q--------D~--------------------------------~~ 963 (1036)
T KOG3531|consen 924 NQLSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQ--------DS--------------------------------EP 963 (1036)
T ss_pred hhhhHHHHHHhhccccceeeeeeecceeeEeecccc--------cc--------------------------------cc
Confidence 468999988755556999999999999999999983 31 13
Q ss_pred ceeEEccceEEEecC-C----CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 006586 173 FGEVHLKVSSIRDSK-S----DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (639)
Q Consensus 173 ~G~I~L~~ssi~~~~-~----d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~~ 227 (639)
..++.|.+-++.... . .+..|.+.-...+|+++|++.=-...||+.|+.+-...-
T Consensus 964 laslPlLgysvs~P~~~d~i~K~~vfkl~fk~hvyffraes~yt~~rw~evi~~a~~s~d 1023 (1036)
T KOG3531|consen 964 LASLPLLGYSVSIPAEPDPIQKDYVFKLKFKSHVYFFRAESYYTFERWMEVITDAPSSAD 1023 (1036)
T ss_pred cccccccccccCCCCCCCCcchhheeeeehhhhHHHHhhhhhhhhhhHHHHhhcCCccCC
Confidence 355556665543321 1 246788888889999999999999999999998865543
No 76
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=95.34 E-value=0.041 Score=62.35 Aligned_cols=35 Identities=31% Similarity=0.610 Sum_probs=30.6
Q ss_pred CCcEEE-EeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 190 DKRFSI-FTGTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 190 ~~~F~I-~t~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
+..|.+ ++++|.+.|+|.+.++|+.||.+||.+..
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (496)
T PTZ00283 455 AHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLG 490 (496)
T ss_pred CcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcC
Confidence 567776 45789999999999999999999999865
No 77
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.04 E-value=0.34 Score=44.59 Aligned_cols=51 Identities=18% Similarity=0.554 Sum_probs=39.6
Q ss_pred eeEEccceEEEec-CCCCCcEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDS-KSDDKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 174 G~I~L~~ssi~~~-~~d~~~F~I~t~~-----kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
..|.|..-.+.+. +.|+++|.|...+ .+|.|+|.|.+.+++||..|+.+.+
T Consensus 57 ~~ikls~l~l~e~v~gd~~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 57 SKLQVSKMGLTEHVEGDPCRFALWSGDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred cceeeeeeEeEEccCCCCceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 6666665555554 4568999986543 6999999999999999999998753
No 78
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.86 E-value=0.29 Score=44.09 Aligned_cols=51 Identities=14% Similarity=0.255 Sum_probs=40.5
Q ss_pred eeEEccceEEEe---cCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRD---SKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 174 G~I~L~~ssi~~---~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
.+++|..-.|.. ++.-.+.|.|.++.+.+.++|+|++++.+||+.|+.|+.
T Consensus 46 ~~~~L~~i~V~ni~D~~~~kNafki~t~~~s~i~qaes~~~K~eWl~~le~a~~ 99 (100)
T cd01226 46 STYSLNSVAVVNVKDRENAKKVLKLLIFPESRIYQCESARIKTEWFEELEQAKR 99 (100)
T ss_pred EEEehHHeEEEecCCCcCcCceEEEEeCCccEEEEeCCHHHHHHHHHHHHHHhc
Confidence 666666443322 222368999999999999999999999999999999974
No 79
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=94.61 E-value=0.01 Score=67.85 Aligned_cols=87 Identities=6% Similarity=-0.255 Sum_probs=60.7
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
...|||.|+...+|.||.|||++.+|.+.||+++- + ++.
T Consensus 260 s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~--------d---------------------------------~~s 298 (936)
T KOG0248|consen 260 SRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKI--------D---------------------------------IRS 298 (936)
T ss_pred HHHHHHHhHheeeccceEEEEEcCCCccccccCcc--------c---------------------------------ccc
Confidence 67899999999999999999999999999999862 1 122
Q ss_pred eeEEccc-eEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 006586 174 GEVHLKV-SSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 174 G~I~L~~-ssi~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a 222 (639)
|++-+.. |++.- ....-.-...+-+.+++|-++...-.++||.+++..
T Consensus 299 ~~~~~~~~~s~~f-qli~~t~~~~~~~~s~~lt~dw~~iL~~~iKv~~~~ 347 (936)
T KOG0248|consen 299 VTKLEQQGAAYAF-QLITSTDKMNFMTESERTTHDWVTILSAAIKATTLR 347 (936)
T ss_pred cceeeccchhHHh-hhhhhceeEEEeccChhhhhhhHHHHHHHHHHHhcc
Confidence 3333332 22210 001111223344678999999999999999998764
No 80
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.30 E-value=0.27 Score=43.75 Aligned_cols=90 Identities=19% Similarity=0.175 Sum_probs=61.0
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
..+|+|.|-. .+.=|.|=|-|=+++|-|-+.... . + | .....+-.
T Consensus 4 v~eg~lvel~--~~~rK~R~~FLFnDlLvc~~ik~~-------~---~----~-------------------k~~kY~~~ 48 (96)
T cd01228 4 VKDSFLVELV--EGSRKLRHLFLFTDVLLCAKLKKT-------S---R----G-------------------KHQQYDCK 48 (96)
T ss_pred cccceeeeeh--hCCCcceEEEeeccEEEEEEeeec-------c---C----c-------------------ccccccee
Confidence 3579999976 344678888899999999886310 0 0 0 01111222
Q ss_pred eeEEccceEEEecCCCCCcEEE-EeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSKSDDKRFSI-FTGTKRLHLRAETREDRFAWMEALQAVK 223 (639)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I-~t~~kt~~L~AeS~edr~~WI~AL~~a~ 223 (639)
-.|+|..-.+... .|.+ .+++|+|.+-|.|..|+.+||++|+...
T Consensus 49 w~IPL~dl~~~~~-----~~~~~~~~~KSf~~~asS~~Er~eW~~hI~~~~ 94 (96)
T cd01228 49 WYIPLADLSFPSE-----PFRIHNKNGKSYTFLLSSDYERSEWRESIQKLQ 94 (96)
T ss_pred EEEEhHHheecch-----hhhccccCCceEEEEecCHHHHHHHHHHHHHHh
Confidence 5677776555432 2554 4689999999999999999999997643
No 81
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.11 E-value=0.28 Score=44.65 Aligned_cols=34 Identities=32% Similarity=0.602 Sum_probs=29.0
Q ss_pred CCCCcEEEEeCC----eEEEEEcCCHHHHHHHHHHHHH
Q 006586 188 SDDKRFSIFTGT----KRLHLRAETREDRFAWMEALQA 221 (639)
Q Consensus 188 ~d~~~F~I~t~~----kt~~L~AeS~edr~~WI~AL~~ 221 (639)
..++.|+|+-+. ++++|.|+|+++++.|++.|+.
T Consensus 77 ~e~~~fTIiy~~~~~~k~L~lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 77 LEERCFTIVYGTDLNLKSLDLVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred ccccEEEEEECCCCCeeEEEEEECCHHHHHHHHHHHhh
Confidence 457889987654 6899999999999999999974
No 82
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=93.03 E-value=0.6 Score=42.73 Aligned_cols=79 Identities=22% Similarity=0.264 Sum_probs=57.2
Q ss_pred CCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCceeEEccceEEEe-
Q 006586 107 KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD- 185 (639)
Q Consensus 107 KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi~~- 185 (639)
..=..|||||=.++|....... . -.+++ -.|.++|+.-+|..
T Consensus 26 qe~~eRyLvLFp~~LlilS~s~--------r-~sGf~----------------------------yqGkLPL~~i~v~~l 68 (111)
T cd01225 26 EEKRERYLVLFPNVLLMLSASP--------R-MSGFI----------------------------YQGKLPLTGIIVTRL 68 (111)
T ss_pred cccceeEEEEcCceEEEEEcCC--------C-ccceE----------------------------EeeeecccccEEech
Confidence 3457899999999888776421 0 01111 23889999888873
Q ss_pred --cCCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 006586 186 --SKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (639)
Q Consensus 186 --~~~d~~~F~I~t~~-kt~~L~AeS~edr~~WI~AL~~a 222 (639)
+....+.|.|..+. .+..+.|.+.+|.++||..|+.-
T Consensus 69 Ed~e~~~~aFeI~G~li~~i~v~C~~~~e~~~Wl~hL~~~ 108 (111)
T cd01225 69 EDTEALKNAFEISGPLIERIVVVCNNPQDAQEWVELLNAN 108 (111)
T ss_pred HhccCccceEEEeccCcCcEEEEeCCHHHHHHHHHHHHhh
Confidence 22235889998765 78888999999999999999874
No 83
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]
Probab=91.86 E-value=0.0023 Score=68.70 Aligned_cols=80 Identities=30% Similarity=0.490 Sum_probs=61.9
Q ss_pred CceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCceeEEccceEE--Ee
Q 006586 108 GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSI--RD 185 (639)
Q Consensus 108 gWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~I~L~~ssi--~~ 185 (639)
.|++-||||.+..|.||+..... + . ..--|+|+|..|.- ..
T Consensus 34 ~~~k~~~~~~~~~~~~~~d~~A~------~-----------------------------~--~~L~~~~~LR~C~~v~e~ 76 (593)
T KOG4807|consen 34 QWKKHWFVLTDSSLKYYRDSTAE------E-----------------------------A--DELDGEIDLRSCTDVTEY 76 (593)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHH------h-----------------------------c--ccCCccccHHHHHHHHHH
Confidence 59999999999999999974211 0 0 00228999998842 22
Q ss_pred cCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 186 SKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 186 ~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
....++.|+|.+-+..|.|.|-+.--+..||.|++..+.
T Consensus 77 a~q~nY~~~i~~~~~~~tL~~~~s~Ir~~~~~A~~kT~~ 115 (593)
T KOG4807|consen 77 AVQRNYGFQIHTKDAVYTLSAMTSGIRRNWIEALRKTVR 115 (593)
T ss_pred HHHhccceeecccchhhhhHHHHHHHHHHHHHHHHhccC
Confidence 234578999999999999999999999999999996544
No 84
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=90.41 E-value=3.5 Score=39.08 Aligned_cols=52 Identities=25% Similarity=0.436 Sum_probs=39.8
Q ss_pred eeEEccceEEEec-CCCCCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006586 174 GEVHLKVSSIRDS-KSDDKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDM 225 (639)
Q Consensus 174 G~I~L~~ssi~~~-~~d~~~F~I~t~--~kt~~L~AeS~edr~~WI~AL~~a~~~ 225 (639)
..|.|..-.+.++ ..|+++|.|-+. ..+|.|+|.|.+.++.|+..|......
T Consensus 63 ~~ikls~lglte~v~gd~~kFeiw~~~~~~~yilqA~t~e~K~~Wv~~I~~iL~~ 117 (133)
T cd01227 63 QSLKMTAVGITENVKGDTKKFEIWYNAREEVYILQAPTPEIKAAWVNEIRKVLTS 117 (133)
T ss_pred eeEEeecccccccCCCCccEEEEEeCCCCcEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 5666654455543 346799999765 469999999999999999999987653
No 85
>PF15408 PH_7: Pleckstrin homology domain
Probab=89.78 E-value=0.15 Score=44.44 Aligned_cols=96 Identities=13% Similarity=0.200 Sum_probs=54.9
Q ss_pred EEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCcee
Q 006586 96 SGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGE 175 (639)
Q Consensus 96 ~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~G~ 175 (639)
+||||.-- -..-|+|+.+|.+-.|-+|..+|...+.-=+ ++ +..=.
T Consensus 1 EGYLY~~E--~~si~rRF~~L~~K~~~~~~~KGG~~L~sF~----------------L~----------------~s~~s 46 (104)
T PF15408_consen 1 EGYLYRDE--DSSIQRRFVMLRSKQFNMYEDKGGQYLCSFQ----------------LS----------------SSVVS 46 (104)
T ss_pred CCeEEEec--cchHHHHHHhhhhceeEEecccCCceeeeee----------------hh----------------hhhhh
Confidence 58998743 1247899999999999999987753222000 00 00011
Q ss_pred EEccceEEEecCCCCCcEEE--EeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006586 176 VHLKVSSIRDSKSDDKRFSI--FTG-TKRLHLRAETREDRFAWMEALQAVKDM 225 (639)
Q Consensus 176 I~L~~ssi~~~~~d~~~F~I--~t~-~kt~~L~AeS~edr~~WI~AL~~a~~~ 225 (639)
|+|..-+-..+.-.-..|-| ..+ .+.+.+-|+|++-++.||+++..-...
T Consensus 47 ~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~~~~FA~S~~~~~~Wi~~mN~~s~~ 99 (104)
T PF15408_consen 47 HPMVNFSQAVPNLGINAFGFLMYSPSRRHVQCFASSKKVCQSWIQVMNSPSFR 99 (104)
T ss_pred cccccccccCCCCCeeEEEEEEecCCcchhhhhhhHHHHHHHHHHHhcChhhh
Confidence 11111110001101123433 333 577888999999999999999875443
No 86
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=87.29 E-value=4.8 Score=37.31 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=27.9
Q ss_pred cEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006586 192 RFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDM 225 (639)
Q Consensus 192 ~F~I~t~--~kt~~L~AeS~edr~~WI~AL~~a~~~ 225 (639)
.|.|... ...|.|.|.|++++..||+||..|+.-
T Consensus 78 ~f~L~~~~~~~~~~f~~Ktee~K~kWm~al~~a~sn 113 (116)
T cd01223 78 GFYLAHKQGKTGFTFYFKTEHLRKKWLKALEMAMSN 113 (116)
T ss_pred EEEEEecCCCccEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 4556543 367999999999999999999999863
No 87
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=84.88 E-value=2.1 Score=48.95 Aligned_cols=90 Identities=21% Similarity=0.231 Sum_probs=62.1
Q ss_pred CCcEEEEEEeecCCCCCceeeEEEE-eCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCC
Q 006586 92 GNGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (639)
Q Consensus 92 ~~~~~G~L~K~~n~~KgWkrRWFVL-~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (639)
...+.|+|.|+...+ =|+|.|+| ..+.|.|+.-+ +.+
T Consensus 450 ~i~k~~~l~k~~~lf--~rkr~lllTn~~rll~~~~~---~~~------------------------------------- 487 (604)
T KOG0592|consen 450 LILKEGALEKRQGLF--ARKRMLLLTNGPRLLYVDPQ---NLV------------------------------------- 487 (604)
T ss_pred hHHhHHHHHhhhhhh--hceeEEEecCCCeEEEEecc---cce-------------------------------------
Confidence 345778888876554 36799999 56778888732 000
Q ss_pred CCceeEEccceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 171 KPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 171 kp~G~I~L~~ssi~~~~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
..|+|.++.+. +......+.|.|.|+.|+|+|.- =+.....|-.||..+....
T Consensus 488 -lk~eip~~~~~-~~e~~n~~~~~i~TP~k~~~l~d-~~~~as~w~~ai~~~~~~~ 540 (604)
T KOG0592|consen 488 -LKGEIPWSPDL-RVELKNSSTFFIHTPNKVYYLED-PEQRASVWCKAIETVRKRY 540 (604)
T ss_pred -eccccccCccc-ceeeccCcceEEECCccceeccC-cccchhHHHHhhhhhhhcc
Confidence 22777776632 33334678899999999999965 3456678999999995544
No 88
>KOG1738 consensus Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like [Nucleotide transport and metabolism]
Probab=84.20 E-value=0.4 Score=55.10 Aligned_cols=37 Identities=30% Similarity=0.520 Sum_probs=29.9
Q ss_pred CCCcEEEEEEeec--CCC-CCceeeEEEEeCCeEEEEEec
Q 006586 91 VGNGISGVLYKWV--NYG-KGWRPRWFVLQDGVLSYYKIH 127 (639)
Q Consensus 91 ~~~~~~G~L~K~~--n~~-KgWkrRWFVL~~g~LsYYK~~ 127 (639)
....++|||++.. +++ ..|++=||||.|..|+.|+.+
T Consensus 560 ~~G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~ 599 (638)
T KOG1738|consen 560 GRGDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNH 599 (638)
T ss_pred ccchhhccchhhccchHHHHHhhhheeeecCchhhhhhhh
Confidence 3356899999875 333 349999999999999999986
No 89
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=78.89 E-value=1.3 Score=48.45 Aligned_cols=93 Identities=25% Similarity=0.309 Sum_probs=58.5
Q ss_pred cEEEEEEeec--CCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCC
Q 006586 94 GISGVLYKWV--NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (639)
Q Consensus 94 ~~~G~L~K~~--n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~k 171 (639)
..-|||.++. +-.+.|++-+.+|.+.-|..|.+- | .-++. + ..
T Consensus 293 kHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~-P------~~kea------------w----------------s~ 337 (506)
T KOG3551|consen 293 KHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESM-P------WTKEA------------W----------------SR 337 (506)
T ss_pred hhhhhHHhhccCCChhhhhhheeeechhhhhhhhcC-h------hhHHH------------h----------------cC
Confidence 3569999995 334569999999988777777763 1 11110 0 01
Q ss_pred CceeEEccceEEEe--------cCCCCCcEEEEeCC----eEEEEEcCCHHHHHHHHHHHHH
Q 006586 172 PFGEVHLKVSSIRD--------SKSDDKRFSIFTGT----KRLHLRAETREDRFAWMEALQA 221 (639)
Q Consensus 172 p~G~I~L~~ssi~~--------~~~d~~~F~I~t~~----kt~~L~AeS~edr~~WI~AL~~ 221 (639)
|..+-.|....+.- ...-+..|...||+ .++.|+++|..|+..|..+|..
T Consensus 338 P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~RtGTrqGV~thlfrvEThrdLa~WtRslVq 399 (506)
T KOG3551|consen 338 PRHTYPLVATRLVHSGSGKGSVIKGLTLSFATRTGTRQGVETHLFRVETHRELAAWTRSLVQ 399 (506)
T ss_pred hhhhhhhhhhhheecCCCCCCCcCCceEEEEEecccccceEEEEEEeccHHHHHHHHHHHHH
Confidence 22333332211110 11223578998886 6899999999999999988754
No 90
>KOG3727 consensus Mitogen inducible gene product (contains ERM and PH domains) [Cell cycle control, cell division, chromosome partitioning]
Probab=78.78 E-value=0.39 Score=54.47 Aligned_cols=53 Identities=17% Similarity=0.247 Sum_probs=39.3
Q ss_pred CceeEEccceEEEecCCC----CCcEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 172 PFGEVHLKVSSIRDSKSD----DKRFSIFT---GTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 172 p~G~I~L~~ssi~~~~~d----~~~F~I~t---~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
|-+.|+|++|.+.++-.+ ...|.|.. +..-++|||++++....||.|-+-|..
T Consensus 400 p~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~QYA~WMAaCrLASK 459 (664)
T KOG3727|consen 400 PAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQYARWMAACRLASK 459 (664)
T ss_pred CCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHHHHHHHHHHhhHhhc
Confidence 668888888877665433 23455432 457899999999999999999887653
No 91
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=74.34 E-value=0.14 Score=60.05 Aligned_cols=90 Identities=16% Similarity=0.286 Sum_probs=66.3
Q ss_pred EEEEEEeecCCCCCceeeEEEEeCCe-EEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 95 ISGVLYKWVNYGKGWRPRWFVLQDGV-LSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 95 ~~G~L~K~~n~~KgWkrRWFVL~~g~-LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
..|-+.++.|-...||.|+|.+++.+ +.|-|.. .+.-+
T Consensus 4 ~rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa-----------------------------------------~g~~~ 42 (1099)
T KOG1170|consen 4 TRGLDNDVDNEREAWKQSILRAKDRMPEKVAKTA-----------------------------------------SGPLF 42 (1099)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHhcc-----------------------------------------CCccH
Confidence 45777777888888999999998877 4444431 01122
Q ss_pred eeEEccceEEEecCC--CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006586 174 GEVHLKVSSIRDSKS--DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (639)
Q Consensus 174 G~I~L~~ssi~~~~~--d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~ 225 (639)
-++.|..+.+.++.. ....|+|+++-|+..++|++..++..||.+++.....
T Consensus 43 ~~~d~t~a~~~eSs~~n~~~sf~vi~~~rk~r~~adn~ke~e~wi~~~kt~q~~ 96 (1099)
T KOG1170|consen 43 ALLDLTSAHVAESSTNNPRPSFCVITPVRKHRLCADNRKEMEKWINQSKTPQHL 96 (1099)
T ss_pred HHHhcccccccccccCCCCCCeeEecccHHhhhhccchhHHHHhhccccchhhc
Confidence 455566666655432 3578999999999999999999999999999887653
No 92
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=74.18 E-value=4 Score=38.68 Aligned_cols=34 Identities=21% Similarity=0.069 Sum_probs=12.7
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEec
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIH 127 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~ 127 (639)
+++|-|.|++.....|-.=-+.|=|..|---|.+
T Consensus 2 i~~G~L~Rk~~~~~~~~di~~~LFDh~Lll~K~k 35 (135)
T PF15405_consen 2 IYKGDLKRKGDNSFNWVDIHVYLFDHYLLLTKPK 35 (135)
T ss_dssp ---------------S-EEEEEEESSEEEEEEEE
T ss_pred ccccccccccccccccceeEEEeeccEEEEEEEE
Confidence 4689999998888789776666777777766654
No 93
>KOG3520 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=72.01 E-value=3.3 Score=51.06 Aligned_cols=57 Identities=21% Similarity=0.415 Sum_probs=47.4
Q ss_pred ceeEEccceEEEecCCCCCcEEEEe-C---CeEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 006586 173 FGEVHLKVSSIRDSKSDDKRFSIFT-G---TKRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (639)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t-~---~kt~~L~AeS~edr~~WI~AL~~a~~~~~~~ 229 (639)
.++|.|..-.++....|.+.|.|++ . -..|-|.|.|..||..||+-|+.++...++.
T Consensus 667 spVisL~~livRevAtd~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~s~~~~ 727 (1167)
T KOG3520|consen 667 SPVISLQKLIVREVATDEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVASCPRN 727 (1167)
T ss_pred CCceehHHHHHHHHhccccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhCCcc
Confidence 4788888777777777877777554 3 4899999999999999999999999988764
No 94
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=71.55 E-value=2.9 Score=49.77 Aligned_cols=98 Identities=28% Similarity=0.406 Sum_probs=71.8
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
+.+|-|.|-+ .||-|.|-|-|-..+|-|-.+ ++ +..+-+| ..
T Consensus 751 ir~g~llK~s--kkgLqqrmfFLfsdillytsk-~~-------~~~~~fr----------------------------i~ 792 (1036)
T KOG3531|consen 751 IRSGCLLKLS--KKGLQQRMFFLFSDILLYTSK-GP-------DVQKCFR----------------------------IN 792 (1036)
T ss_pred hhcCCchhhc--cccchhhhhhhhhhhheeccC-CC-------ChhheeE----------------------------ec
Confidence 6789999975 467899988887777776543 32 2222233 34
Q ss_pred eeEEccceEEEecC---CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccccc
Q 006586 174 GEVHLKVSSIRDSK---SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPRMS 230 (639)
Q Consensus 174 G~I~L~~ssi~~~~---~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~~~~~~ 230 (639)
|.|.|. -.++.+. +-+++|.|.++.+..+..|.+..+..+|+..++.+++..++..
T Consensus 793 g~lP~~-l~~en~en~~s~p~~~ti~~~qk~i~vsast~~~sk~~~~~r~~~i~~~~k~~ 851 (1036)
T KOG3531|consen 793 GDLPLT-LTMENSENEWSVPHCFTISGAQKQIYVSASTRRESKKWEFDRRKAIDLAPKKS 851 (1036)
T ss_pred cCCceE-eeeecccccccCCceEEEeccceEEEEeccchhhhhhhhhccchhhhhccccC
Confidence 666666 3343322 1258999999999999999999999999999999999887753
No 95
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=68.27 E-value=16 Score=43.66 Aligned_cols=73 Identities=22% Similarity=0.244 Sum_probs=52.6
Q ss_pred HHHHHHHHHhhcccHHHHHHHHHHHHhhhhhHHHHHHHHHHHH-------HHHHHHHHHHHHhccchhhhHHhhhhhhhh
Q 006586 245 TEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQ-------WLLIDTLRQLETEKVDLENTVVDESQRQLI 317 (639)
Q Consensus 245 ~~~L~~~L~e~~~~~~~i~~~eq~~~~e~~~l~~qL~~~~e~~-------~~L~d~L~~le~ek~~LE~tvv~~sk~~~~ 317 (639)
.+.||.++.....+|..++-+.+.+..|-.+||.++..+...| ..|+..|..+..+|..||.++..+-+++-.
T Consensus 441 E~ELRsqis~l~~~Er~lk~eL~qlr~ene~Lq~Kl~~L~~aRq~DKq~l~~LEkrL~eE~~~R~~lEkQL~eErk~r~~ 520 (697)
T PF09726_consen 441 EQELRSQISSLTNNERSLKSELSQLRQENEQLQNKLQNLVQARQQDKQSLQQLEKRLAEERRQRASLEKQLQEERKARKE 520 (697)
T ss_pred HHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 3578888877776777777777777777777777666555333 357777887888889999998877665433
No 96
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=65.21 E-value=15 Score=42.37 Aligned_cols=99 Identities=14% Similarity=0.143 Sum_probs=56.0
Q ss_pred cEEEEEEeecCCCCCceeeEEEEeCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCCCCc
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~kp~ 173 (639)
.++||+.-.+..-..-||.|.-|+...+.-|..... .+-.|.|+..-+ .
T Consensus 414 ~kEGWmvHyt~~d~lRkrHYWrldsk~itlfqn~s~---------~ryYkeIPLsEI---l------------------- 462 (888)
T KOG4236|consen 414 LKEGWMVHYTSKDNLRKRHYWRLDSKCITLFQNEST---------NRYYKEIPLSEI---L------------------- 462 (888)
T ss_pred hhcceEEEEechhhhhhhhhheeccceeEeeecCCC---------ceeEEeecHHHh---h-------------------
Confidence 589999988765433455577787777777765311 011111211100 0
Q ss_pred eeEEccceEEEecCCCCCcEEEEeCCeEEEEEcCC------------HHHHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAET------------REDRFAWMEALQAVKD 224 (639)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t~~kt~~L~AeS------------~edr~~WI~AL~~a~~ 224 (639)
....-.+.+....+..++.|.|.|++-+|++ .++ .+..+.|-.||+.|.-
T Consensus 463 ~v~~~~~~~~vp~~~~phcFEI~T~~~vyfV-ge~p~~~~~~~~g~g~d~a~~w~~ai~~alM 524 (888)
T KOG4236|consen 463 SVSSNNGFSLVPAGTNPHCFEIRTATTVYFV-GENPSSTPGGESGVGLDAAQGWETAIQQALM 524 (888)
T ss_pred eeeccCCcccCCCCCCCceEEEEeeeEEEEe-cCCCCCCccccccccchhhccCchhhhhccc
Confidence 0000011122234567899999999955554 454 4558899999998753
No 97
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=64.48 E-value=7.7 Score=44.64 Aligned_cols=92 Identities=17% Similarity=0.139 Sum_probs=62.7
Q ss_pred cEEEEEEeecCCCCCceeeEEEE---eCCeEEEEEecCCCccccchhhcccceeeccchhhhhhhcccccccchhcccCC
Q 006586 94 GISGVLYKWVNYGKGWRPRWFVL---QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (639)
Q Consensus 94 ~~~G~L~K~~n~~KgWkrRWFVL---~~g~LsYYK~~~~~~~~~~~e~~~~~rvig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (639)
.+.+.|.+.-..+++|..-|++. ++-+++-|-.. ++ +
T Consensus 498 ~~~s~l~~~~~~~~~g~~a~~~vP~~d~~~~~~Yg~~--------qD----v---------------------------- 537 (623)
T KOG4424|consen 498 VICSHLKYMEAAGKTGILAWSVVPKSDPLVDYSYGSP--------QD----V---------------------------- 537 (623)
T ss_pred eehhhHHHHhhcCccceeeeeeccCCCCccccccCCc--------cc----c----------------------------
Confidence 45666665544678899999999 56777777764 11 0
Q ss_pred CCceeEEccceEEEec-----CCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006586 171 KPFGEVHLKVSSIRDS-----KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (639)
Q Consensus 171 kp~G~I~L~~ssi~~~-----~~d~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~ 225 (639)
.....|.|.++.+... .+-...|.+......+||.|+|++-.+.|++-|..|..-
T Consensus 538 ~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~~~~~~~a~~~q~qq~wl~~l~~A~~~ 597 (623)
T KOG4424|consen 538 RAQATIPLPGVEVTIPEFVRREDLFHVFKLVQSHLSWHLAADDEQLQQRWLEVLLLAVSG 597 (623)
T ss_pred ccccccccCccccCCCcccccchhcchhhhhhhcceeeeccCCHHHHHHHHHHHHhhhcc
Confidence 1225667776655421 111234445556789999999999999999999988754
No 98
>KOG3523 consensus Putative guanine nucleotide exchange factor TIM [Signal transduction mechanisms]
Probab=55.95 E-value=16 Score=42.36 Aligned_cols=21 Identities=43% Similarity=0.740 Sum_probs=19.5
Q ss_pred eEEEEEcCCHHHHHHHHHHHH
Q 006586 200 KRLHLRAETREDRFAWMEALQ 220 (639)
Q Consensus 200 kt~~L~AeS~edr~~WI~AL~ 220 (639)
-.|.|+|+|..||+.||.||.
T Consensus 571 ~e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 571 TELLLSAESQSDRQRWISALR 591 (695)
T ss_pred eeeeecCCchHHHHHHHHhcC
Confidence 469999999999999999997
No 99
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=54.98 E-value=15 Score=40.59 Aligned_cols=53 Identities=21% Similarity=0.402 Sum_probs=42.1
Q ss_pred ceeEEccceEEEe----cCCCCCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006586 173 FGEVHLKVSSIRD----SKSDDKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDM 225 (639)
Q Consensus 173 ~G~I~L~~ssi~~----~~~d~~~F~I~t~~--kt~~L~AeS~edr~~WI~AL~~a~~~ 225 (639)
+..|.|+-|-+.. .+..++.|.|.+++ .++.|||.+.++...|..||.++...
T Consensus 215 ~k~IpLKm~yvaR~~~~~DpEnR~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~~ 273 (506)
T KOG3551|consen 215 RKTIPLKMAYVARNLIDADPENRQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVNT 273 (506)
T ss_pred ccccchhhHHHHhhCCCCCcccceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHhh
Confidence 4678898775432 23446889999875 78999999999999999999998754
No 100
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=54.01 E-value=68 Score=29.24 Aligned_cols=35 Identities=9% Similarity=0.222 Sum_probs=29.1
Q ss_pred CCCCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHH
Q 006586 187 KSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQA 221 (639)
Q Consensus 187 ~~d~~~F~I~t-~~kt~~L~AeS~edr~~WI~AL~~ 221 (639)
++..+.|.+.. +.--|.|.|.+.++++.|+..|+.
T Consensus 71 PD~~nTFvLK~~~~~eyI~Ea~d~~q~~SWla~Ir~ 106 (107)
T cd01231 71 PDNLYTFVLKVDDNTDIIFEVGDEQQLNSWLAELRY 106 (107)
T ss_pred cCcccEEEEEecCCceEEEEcCCHHHHHHHHHHHhc
Confidence 44578899865 445799999999999999999875
No 101
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=52.93 E-value=82 Score=30.43 Aligned_cols=29 Identities=21% Similarity=0.249 Sum_probs=25.6
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 006586 198 GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (639)
Q Consensus 198 ~~kt~~L~AeS~edr~~WI~AL~~a~~~~ 226 (639)
+.++|+|++.+++-+.+.|..|++.....
T Consensus 129 pE~vfqLCcS~~E~k~~flK~Irsilre~ 157 (160)
T cd01255 129 PEKVFVLCCSTAESRNAFLKTIRSILRES 157 (160)
T ss_pred CcceEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999877543
No 102
>KOG3003 consensus Molecular chaperone of the GrpE family [Posttranslational modification, protein turnover, chaperones]
Probab=52.32 E-value=28 Score=36.02 Aligned_cols=40 Identities=23% Similarity=0.368 Sum_probs=30.7
Q ss_pred CCCCCCCCCCCCC-eEEEEeCCCCeEEEeeccccCCcceeeEEeCCceEEEEE
Q 006586 503 GRICKPFNPLLGE-TYEADYPDKGLQFFSEKVSHHPMIVACHCQGTGWKFWGD 554 (639)
Q Consensus 503 ~~~~KPfNPiLGE-Tfe~~~~d~g~~~iaEQVSHHPPIsA~~~e~~g~~~~g~ 554 (639)
..+..||||-+=| +|++ |+ .--||-+.+||...||+++|-
T Consensus 180 dPigekFDPn~HEAvfq~--p~----------~~k~pgtV~~v~k~Gy~L~~R 220 (236)
T KOG3003|consen 180 DPIGEKFDPNEHEAVFQV--PD----------AAKEPGTVALVTKKGYKLNGR 220 (236)
T ss_pred CCCCCCCCcchhheeEec--cc----------cCCCCCeEEEEeccCcccCCe
Confidence 3578999999887 4544 23 226899999999999999875
No 103
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=45.96 E-value=35 Score=31.43 Aligned_cols=35 Identities=11% Similarity=0.359 Sum_probs=30.0
Q ss_pred CcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 006586 191 KRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (639)
Q Consensus 191 ~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~~ 225 (639)
+-|.|.|....+.|.|+|..+.+.|+++|+.-...
T Consensus 71 ~yfgL~T~~G~vEfec~~~~~~k~W~~gI~~mL~~ 105 (110)
T PF08458_consen 71 RYFGLKTAQGVVEFECDSQREYKRWVQGIQHMLSQ 105 (110)
T ss_pred EEEEEEecCcEEEEEeCChhhHHHHHHHHHHHHHH
Confidence 34668899999999999999999999999876543
No 104
>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain.
Probab=42.76 E-value=1e+02 Score=33.38 Aligned_cols=21 Identities=52% Similarity=0.732 Sum_probs=16.1
Q ss_pred HHHHHHHHhccchhhhHHhhh
Q 006586 292 DTLRQLETEKVDLENTVVDES 312 (639)
Q Consensus 292 d~L~~le~ek~~LE~tvv~~s 312 (639)
..|.++..+|++||++++++-
T Consensus 156 ~~le~Lr~EKVdlEn~LE~EQ 176 (310)
T PF09755_consen 156 EELERLRREKVDLENTLEQEQ 176 (310)
T ss_pred HHHHHHHHHHHhHHHHHHHHH
Confidence 446678889999999888543
No 105
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=42.37 E-value=33 Score=41.50 Aligned_cols=57 Identities=12% Similarity=0.175 Sum_probs=42.0
Q ss_pred CCceeEEccceEEEecCCCCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 006586 171 KPFGEVHLKVSSIRDSKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (639)
Q Consensus 171 kp~G~I~L~~ssi~~~~~d~~~F~I~t-~~kt~~L~AeS~edr~~WI~AL~~a~~~~~~~ 229 (639)
.++|.|.+..+.|.. .+.+.+++.. +.++|++.+.+..+++.|+.+++.+.....+.
T Consensus 117 ~~~~~~~~~~a~i~~--~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 174 (799)
T KOG1737|consen 117 TCGGGINLVTAWIQN--GERMDICSVDGSCQIYLVELSKKLQRQGWLHALELAPLIAVEQ 174 (799)
T ss_pred CCCCccccccccccc--CCCcccchhhcccchhhhhhhHHHhhcchhhhhhhccchhhhc
Confidence 345899998887753 3445555543 36889999999999999999999985544443
No 106
>KOG4047 consensus Docking protein 1 (p62dok) [Signal transduction mechanisms]
Probab=40.96 E-value=14 Score=41.50 Aligned_cols=29 Identities=24% Similarity=0.001 Sum_probs=23.2
Q ss_pred CcEEEEEEeecCCCC--CceeeEEEEeCCeE
Q 006586 93 NGISGVLYKWVNYGK--GWRPRWFVLQDGVL 121 (639)
Q Consensus 93 ~~~~G~L~K~~n~~K--gWkrRWFVL~~g~L 121 (639)
..+.|+++-+.+.++ .|+++|-+|..|.+
T Consensus 8 ~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~ 38 (429)
T KOG4047|consen 8 LVKDGVPDNHRNKFKVKNVRDDGAELGSGSM 38 (429)
T ss_pred ccccCccchhhhhhccccccccceeeecccc
Confidence 468899888877655 89999999977654
No 107
>KOG2070 consensus Guanine nucleotide exchange factor [Nucleotide transport and metabolism]
Probab=40.58 E-value=40 Score=38.43 Aligned_cols=48 Identities=19% Similarity=0.355 Sum_probs=34.8
Q ss_pred eeEEccceEEEecC---CCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHH
Q 006586 174 GEVHLKVSSIRDSK---SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQA 221 (639)
Q Consensus 174 G~I~L~~ssi~~~~---~d~~~F~I~t~~-kt~~L~AeS~edr~~WI~AL~~ 221 (639)
|.+.+.+-.|+.-. ...++|.|...+ ......++...|.++|+++|+.
T Consensus 353 gKlp~tG~iV~klEdte~~~nafeis~~ti~rIv~~c~~~~~l~~wve~ln~ 404 (661)
T KOG2070|consen 353 GKLPTTGMIVTKLEDTENHRNAFEISGSTIERIVVSCNNQQDLQEWVEHLNK 404 (661)
T ss_pred cccccceeEEeehhhhhcccccccccccchhheeeccCChHHHHHHHHHhhh
Confidence 66666666665322 125788887665 4567789999999999999996
No 108
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=33.32 E-value=12 Score=40.66 Aligned_cols=23 Identities=26% Similarity=0.313 Sum_probs=17.9
Q ss_pred cEEEEEEeecC-----CC-CCceeeEEEE
Q 006586 94 GISGVLYKWVN-----YG-KGWRPRWFVL 116 (639)
Q Consensus 94 ~~~G~L~K~~n-----~~-KgWkrRWFVL 116 (639)
..+|+++|+.. .. .+||+|||.|
T Consensus 304 ~~eg~~~~r~~~~~~~~~~~~fkk~~f~l 332 (333)
T cd05135 304 VKEGYLHKRKTEGPQLLTRFAFKKRYFWL 332 (333)
T ss_pred hhhhHhhhccccCCCCcccccccceeeec
Confidence 68999999862 12 2699999987
No 109
>PF14254 DUF4348: Domain of unknown function (DUF4348); PDB: 3SBU_A.
Probab=32.84 E-value=57 Score=34.51 Aligned_cols=41 Identities=22% Similarity=0.404 Sum_probs=24.5
Q ss_pred eeccceeeeeccceeeeeeceeEE-EEe-CCccEEEEEEeecC
Q 006586 587 SKVTSSIYNLILGKLYCDHYGTMR-IEG-NREYSCKLKFKEQS 627 (639)
Q Consensus 587 ~~p~~~v~nii~G~~~~e~~G~~~-I~~-~tg~~~~l~F~~~~ 627 (639)
.+|.-.|+||+.|+.|.|-..++. |++ .+|+..+|.|+.+|
T Consensus 224 ~lP~~~i~NI~YGQky~~s~~KIl~~rGi~NG~e~~l~Fk~~~ 266 (273)
T PF14254_consen 224 ELPKGKIYNINYGQKYTESNQKILVFRGIANGLETELYFKKRG 266 (273)
T ss_dssp ---SSEEEEEESS----T-SEEEEEEEESSS--EEEEEEEEET
T ss_pred cCCccceeeeecccccCCCCceEEEEEeecCceeEEEEEEEcC
Confidence 368889999999999999555443 345 58999999999765
No 110
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function.
Probab=32.72 E-value=1.3e+02 Score=32.93 Aligned_cols=49 Identities=18% Similarity=0.174 Sum_probs=29.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHhhhhh
Q 006586 266 EQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVDESQR 314 (639)
Q Consensus 266 eq~~~~e~~~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tvv~~sk~ 314 (639)
.|.+++++-..+.-+...+.+...|+..++++++|+..|+-++....++
T Consensus 108 nqkL~nqL~~~~~vf~k~k~~~q~LE~li~~~~EEn~~lqlqL~~l~~e 156 (401)
T PF06785_consen 108 NQKLKNQLFHVREVFMKTKGDIQHLEGLIRHLREENQCLQLQLDALQQE 156 (401)
T ss_pred HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3445555555555555555556667777777777777776666544444
No 111
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=27.80 E-value=16 Score=39.52 Aligned_cols=26 Identities=27% Similarity=0.429 Sum_probs=18.8
Q ss_pred CcEEEEEEeec--C---CCCCceeeEEEEeC
Q 006586 93 NGISGVLYKWV--N---YGKGWRPRWFVLQD 118 (639)
Q Consensus 93 ~~~~G~L~K~~--n---~~KgWkrRWFVL~~ 118 (639)
..++|.|.|+. . -.|.||+|||.|.+
T Consensus 280 ~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt~ 310 (310)
T cd05134 280 LLKEGFMIKRAQGRKRFGMKNFKKRWFRLTN 310 (310)
T ss_pred hhhhhhHHHhcccCCcccccchhheeeecCC
Confidence 36899999853 1 13468999999853
No 112
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=27.67 E-value=16 Score=39.57 Aligned_cols=24 Identities=25% Similarity=0.342 Sum_probs=18.6
Q ss_pred CcEEEEEEeec-C----CCCCceeeEEEE
Q 006586 93 NGISGVLYKWV-N----YGKGWRPRWFVL 116 (639)
Q Consensus 93 ~~~~G~L~K~~-n----~~KgWkrRWFVL 116 (639)
..++|++.|+. + ..+.||+|||.|
T Consensus 286 ~~k~g~~~~~~~~~~~~~~~~~k~r~~~l 314 (315)
T cd05128 286 VLKEGFMIKRAQGRGRLGRKNFKKRYFRL 314 (315)
T ss_pred hhhhhhhHhhcccCCCccccchhheeeec
Confidence 36899999975 1 235799999998
No 113
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=27.26 E-value=13 Score=40.12 Aligned_cols=26 Identities=31% Similarity=0.606 Sum_probs=19.6
Q ss_pred CcEEEEEEeecC-----CCCCceeeEEEEeC
Q 006586 93 NGISGVLYKWVN-----YGKGWRPRWFVLQD 118 (639)
Q Consensus 93 ~~~~G~L~K~~n-----~~KgWkrRWFVL~~ 118 (639)
..++|+|.|+.. -.|.||+|||.|.+
T Consensus 283 ~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~~ 313 (313)
T cd05394 283 HLKEGEMYKRAQGRTRIGKKNFKKRWFCLTS 313 (313)
T ss_pred hhHHHHHHhhccCCCccccccchhheeecCC
Confidence 368999999851 23579999999853
No 114
>PRK00846 hypothetical protein; Provisional
Probab=26.21 E-value=2.7e+02 Score=24.08 Aligned_cols=15 Identities=20% Similarity=0.182 Sum_probs=8.0
Q ss_pred cccHHHHHHHHHhhc
Q 006586 242 QVSTEKLRQLLSEEG 256 (639)
Q Consensus 242 ~~s~~~L~~~L~e~~ 256 (639)
++-.+.+..||.++.
T Consensus 5 ~~~~~~le~Ri~~LE 19 (77)
T PRK00846 5 SLRDQALEARLVELE 19 (77)
T ss_pred hHHHhhHHHHHHHHH
Confidence 334455666666544
No 115
>KOG0689 consensus Guanine nucleotide exchange factor for Rho and Rac GTPases [Signal transduction mechanisms]
Probab=25.96 E-value=66 Score=36.54 Aligned_cols=38 Identities=24% Similarity=0.455 Sum_probs=30.7
Q ss_pred CCCCCcEEEEeCC----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 187 KSDDKRFSIFTGT----KRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 187 ~~d~~~F~I~t~~----kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
..++.+|.|.... .+|.|+|.|.++.++|+++|-....
T Consensus 320 ~~s~~rF~i~~r~~~~~~~~vlqa~s~~~k~~W~~~i~~~l~ 361 (448)
T KOG0689|consen 320 DNSASRFEIWFRGRKKREAYVLQAGSKEIKYAWTRAISSLLW 361 (448)
T ss_pred CCCCcchhhhhhcccccceeEEeeCCHHHHHHHHHHHHHHHH
Confidence 4567899986543 3699999999999999999877654
No 116
>PF10504 DUF2452: Protein of unknown function (DUF2452); InterPro: IPR019534 This entry contains proteins that have no known function.
Probab=25.82 E-value=57 Score=31.94 Aligned_cols=25 Identities=24% Similarity=0.499 Sum_probs=20.1
Q ss_pred CCCCCCCCCCeEEEEeCCCCeEEEe
Q 006586 506 CKPFNPLLGETYEADYPDKGLQFFS 530 (639)
Q Consensus 506 ~KPfNPiLGETfe~~~~d~g~~~ia 530 (639)
+==|.|+.|+||.+...++|..|++
T Consensus 85 ~cnF~pipG~iYhLY~r~~G~~ylS 109 (159)
T PF10504_consen 85 KCNFEPIPGQIYHLYRRENGQDYLS 109 (159)
T ss_pred ccCceecCCCEEEEEECCCCCEEEE
Confidence 3458899999999988777877776
No 117
>KOG3915 consensus Transcription regulator dachshund, contains SKI/SNO domain [Transcription]
Probab=25.74 E-value=1.8e+02 Score=33.17 Aligned_cols=42 Identities=21% Similarity=0.272 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHhhhhhhhh
Q 006586 276 LQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVDESQRQLI 317 (639)
Q Consensus 276 l~~qL~~~~e~~~~L~d~L~~le~ek~~LE~tvv~~sk~~~~ 317 (639)
|++||+.++.-|..+.+.|+.+.+-|..|.++++.++|++..
T Consensus 547 lekql~~ErklR~~~qkr~kkEkk~k~k~qe~L~~~sk~req 588 (641)
T KOG3915|consen 547 LEKQLAMERKLRAIVQKRLKKEKKAKRKLQEALEFESKRREQ 588 (641)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchh
Confidence 345666666666666666666555566666677766666543
No 118
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=23.86 E-value=2.4e+02 Score=34.52 Aligned_cols=77 Identities=18% Similarity=0.328 Sum_probs=0.0
Q ss_pred ceeEEccceEEEecCCC--CCcEEEEe-----CCeEEEEEcCCHHHHHHHHHHHHHHHHhccccccCCcCCCCCcccccH
Q 006586 173 FGEVHLKVSSIRDSKSD--DKRFSIFT-----GTKRLHLRAETREDRFAWMEALQAVKDMFPRMSNSELMAPMDSIQVST 245 (639)
Q Consensus 173 ~G~I~L~~ssi~~~~~d--~~~F~I~t-----~~kt~~L~AeS~edr~~WI~AL~~a~~~~~~~~~~~~~~~~~~~~~s~ 245 (639)
+|..++..+.+...... ++.|..+- +..-|.|.|++.++..+|+++|+.+...+
T Consensus 853 rgi~d~~~~nvv~~~q~~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a------------------- 913 (1267)
T KOG1264|consen 853 RGILDLNTYNVVKAPQGKNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKA------------------- 913 (1267)
T ss_pred hccccccccceeecccccCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHh-------------------
Q ss_pred HHHHHHHHhhcccHHHHHHHHHHHHhhhhhH
Q 006586 246 EKLRQLLSEEGVREEVIQESEQIMRNEFAPL 276 (639)
Q Consensus 246 ~~L~~~L~e~~~~~~~i~~~eq~~~~e~~~l 276 (639)
..++.+.- +++-++.+--|++.|
T Consensus 914 ---~tk~s~~k-----~kEk~krIA~ElSdL 936 (1267)
T KOG1264|consen 914 ---DTKESEMK-----YKEKNKRIAIELSDL 936 (1267)
T ss_pred ---hhhhhhhH-----HHHHHHHHHHHhhce
No 119
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=21.33 E-value=2.9e+02 Score=24.29 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=28.6
Q ss_pred CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 006586 190 DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (639)
Q Consensus 190 ~~~F~I~t~~kt~~L~AeS~edr~~WI~AL~~a~~ 224 (639)
...|.+.- ++.|+..|.|.+|+..+|..|-..-.
T Consensus 56 ~~~F~l~~-~k~y~W~a~s~~Ek~~Fi~~L~k~~~ 89 (91)
T PF15277_consen 56 TPEFDLTF-DKPYYWEASSAKEKNTFIRSLWKLYQ 89 (91)
T ss_dssp TTEEEEES-SSEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CcCEEEEE-CCCcEEEeCCHHHHHHHHHHHHHHhc
Confidence 56788876 56999999999999999999876543
No 120
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=21.16 E-value=3.2e+02 Score=28.35 Aligned_cols=80 Identities=20% Similarity=0.233 Sum_probs=40.7
Q ss_pred eeEEccceEEEecCCCCCcEEEE-eCCeEEEEEcCC-----HHHHHHHHHHHHHHHHhcccccc--CCcCCCCCcccccH
Q 006586 174 GEVHLKVSSIRDSKSDDKRFSIF-TGTKRLHLRAET-----REDRFAWMEALQAVKDMFPRMSN--SELMAPMDSIQVST 245 (639)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~-t~~kt~~L~AeS-----~edr~~WI~AL~~a~~~~~~~~~--~~~~~~~~~~~~s~ 245 (639)
+..++.+++|.+...-. .... ..+-.+.|-|.+ ++-.....++|+.......||.. ..++ ..-++.+--
T Consensus 33 ~eYnITisSIiPTT~~e--IA~raaeGADlvlIATDaD~~GReLA~kf~eeLrg~VGhiERmK~PiGHDv-EhiD~elvr 109 (290)
T COG4026 33 SEYNITISSIIPTTNVE--IAKRAAEGADLVLIATDADRVGRELAEKFFEELRGMVGHIERMKIPIGHDV-EHIDVELVR 109 (290)
T ss_pred ccceeEEEeeccCchHH--HHHHhhccCCEEEEeecCcchhHHHHHHHHHHHHHhhhhhheeccCCCCCc-cccCHHHHH
Confidence 56778888876532110 0000 012234444443 34456788888888877766532 1111 111234445
Q ss_pred HHHHHHHHhhc
Q 006586 246 EKLRQLLSEEG 256 (639)
Q Consensus 246 ~~L~~~L~e~~ 256 (639)
..|++.|...|
T Consensus 110 kEl~nAlvRAG 120 (290)
T COG4026 110 KELKNALVRAG 120 (290)
T ss_pred HHHHHHHHHHH
Confidence 66777776666
No 121
>PF09340 NuA4: Histone acetyltransferase subunit NuA4; InterPro: IPR015418 The NuA4 histone acetyltransferase (HAT) multisubunit complex is responsible for acetylation of histone H4 and H2A N-terminal tails in yeast []. NuA4 complexes are highly conserved in eukaryotes and play primary roles in transcription, cellular response to DNA damage, and cell cycle control [].
Probab=20.86 E-value=1.1e+02 Score=26.38 Aligned_cols=33 Identities=30% Similarity=0.278 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhhhHHh
Q 006586 278 SQLLLLKQKQWLLIDTLRQLETEKVDLENTVVD 310 (639)
Q Consensus 278 ~qL~~~~e~~~~L~d~L~~le~ek~~LE~tvv~ 310 (639)
.+|+.+.+++..|.+.|..+|.+.-++|.+-.+
T Consensus 2 ~~L~~l~~~k~~Le~~L~~lE~qIy~~Et~YL~ 34 (80)
T PF09340_consen 2 KELKELLQKKKKLEKDLAALEKQIYDKETSYLE 34 (80)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467777788888899999999888888877554
No 122
>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....
Probab=20.26 E-value=4.4e+02 Score=21.24 Aligned_cols=44 Identities=23% Similarity=0.214 Sum_probs=29.6
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 006586 262 IQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLE 305 (639)
Q Consensus 262 i~~~eq~~~~e~~~l~~qL~~~~e~~~~L~d~L~~le~ek~~LE 305 (639)
-+.|-+.-...+.+|+.++..+......|...+..+..+...|.
T Consensus 17 Ar~~R~RKk~~~~~Le~~~~~L~~en~~L~~~~~~L~~~~~~L~ 60 (64)
T PF00170_consen 17 ARRSRQRKKQYIEELEEKVEELESENEELKKELEQLKKEIQSLK 60 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777777777777777777777766666666666665554444
No 123
>PLN03188 kinesin-12 family protein; Provisional
Probab=20.10 E-value=5.2e+02 Score=33.25 Aligned_cols=78 Identities=24% Similarity=0.311 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHhccccccCCcCCCCCcccccHHHHHHHHHhhcccHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 006586 209 REDRFAWMEALQAVKDMFPRMSNSELMAPMDSIQVSTEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQW 288 (639)
Q Consensus 209 ~edr~~WI~AL~~a~~~~~~~~~~~~~~~~~~~~~s~~~L~~~L~e~~~~~~~i~~~eq~~~~e~~~l~~qL~~~~e~~~ 288 (639)
..||..|+++=-.=+... .++-...+.--.-+++|+.-|..+-.|-+-++++.|..+.-.+-+-+|.+.|++++.
T Consensus 1050 ~~er~~w~e~es~wislt-----eelr~eles~r~l~Ekl~~EL~~eK~c~eel~~a~q~am~ghar~~e~ya~l~ek~~ 1124 (1320)
T PLN03188 1050 EQERLRWTEAESKWISLA-----EELRTELDASRALAEKQKHELDTEKRCAEELKEAMQMAMEGHARMLEQYADLEEKHI 1124 (1320)
T ss_pred HHHHHHHHHHhhhheech-----HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478888988633222111 111111111112236666666655555455677766644344445555555555554
Q ss_pred HHH
Q 006586 289 LLI 291 (639)
Q Consensus 289 ~L~ 291 (639)
.|+
T Consensus 1125 ~ll 1127 (1320)
T PLN03188 1125 QLL 1127 (1320)
T ss_pred HHH
Confidence 443
Done!