Query 006590
Match_columns 639
No_of_seqs 356 out of 1427
Neff 5.4
Searched_HMMs 46136
Date Thu Mar 28 11:37:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006590.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006590hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02869 fatty aldehyde decarb 100.0 9E-200 2E-204 1627.7 49.2 617 1-638 1-619 (620)
2 PF12076 Wax2_C: WAX2 C-termin 100.0 4.5E-67 9.8E-72 493.4 11.7 164 466-634 1-164 (164)
3 PRK14982 acyl-ACP reductase; P 100.0 1.6E-36 3.4E-41 322.2 19.8 263 357-636 35-338 (340)
4 COG5322 Predicted dehydrogenas 100.0 1.3E-36 2.8E-41 307.4 15.7 234 388-636 85-351 (351)
5 KOG0873 C-4 sterol methyl oxid 100.0 3.9E-33 8.4E-38 285.0 14.4 225 50-287 35-272 (283)
6 COG3000 ERG3 Sterol desaturase 99.9 1.2E-26 2.6E-31 240.4 15.9 152 127-287 94-247 (271)
7 KOG0872 Sterol C5 desaturase [ 99.9 6.9E-24 1.5E-28 214.5 10.9 144 126-283 126-269 (312)
8 KOG0874 Sphingolipid hydroxyla 99.8 1.2E-21 2.6E-26 192.9 1.9 147 128-284 122-273 (287)
9 PF04116 FA_hydroxylase: Fatty 99.7 4.3E-17 9.3E-22 145.5 7.6 111 134-254 3-114 (114)
10 cd01078 NAD_bind_H4MPT_DH NADP 99.3 9.6E-12 2.1E-16 122.3 11.1 166 445-630 1-194 (194)
11 PLN02434 fatty acid hydroxylas 99.0 6.7E-09 1.4E-13 106.2 15.1 136 128-277 83-230 (237)
12 KOG0539 Sphingolipid fatty aci 97.7 6.4E-05 1.4E-09 75.2 7.1 137 129-278 84-234 (240)
13 PLN02601 beta-carotene hydroxy 97.4 0.00099 2.1E-08 69.1 10.9 132 118-265 126-272 (303)
14 PF01488 Shikimate_DH: Shikima 97.3 0.00043 9.4E-09 64.9 6.4 92 462-558 11-113 (135)
15 COG0300 DltE Short-chain dehyd 97.2 0.00063 1.4E-08 71.2 6.9 49 461-511 4-54 (265)
16 COG4221 Short-chain alcohol de 97.1 0.00075 1.6E-08 69.6 5.5 44 464-509 7-52 (246)
17 PRK00258 aroE shikimate 5-dehy 97.0 0.0021 4.6E-08 67.3 7.8 125 444-574 103-248 (278)
18 KOG1014 17 beta-hydroxysteroid 96.9 0.0011 2.3E-08 70.6 5.4 47 464-512 50-98 (312)
19 TIGR00507 aroE shikimate 5-deh 96.9 0.0025 5.4E-08 66.3 7.8 124 445-574 99-241 (270)
20 PRK00045 hemA glutamyl-tRNA re 96.8 0.0025 5.3E-08 70.8 6.8 151 461-628 180-360 (423)
21 PRK07424 bifunctional sterol d 96.7 0.0052 1.1E-07 68.1 8.5 135 138-275 18-174 (406)
22 PLN00203 glutamyl-tRNA reducta 96.7 0.0056 1.2E-07 69.9 8.7 210 397-628 201-449 (519)
23 PRK08618 ornithine cyclodeamin 96.6 0.013 2.8E-07 62.9 10.7 140 409-552 64-220 (325)
24 PF13460 NAD_binding_10: NADH( 96.5 0.0049 1.1E-07 59.0 6.2 35 466-502 1-37 (183)
25 COG0169 AroE Shikimate 5-dehyd 96.4 0.0058 1.3E-07 64.7 6.6 138 445-590 106-266 (283)
26 cd01065 NAD_bind_Shikimate_DH 96.4 0.012 2.7E-07 55.1 7.7 123 446-573 2-142 (155)
27 TIGR02853 spore_dpaA dipicolin 96.3 0.02 4.3E-07 60.6 9.8 125 405-554 108-241 (287)
28 PLN03209 translocon at the inn 96.2 0.013 2.8E-07 67.5 8.3 59 447-507 59-124 (576)
29 PRK13940 glutamyl-tRNA reducta 96.2 0.0062 1.3E-07 67.7 5.4 210 395-629 116-354 (414)
30 CHL00194 ycf39 Ycf39; Provisio 96.1 0.014 3E-07 61.6 7.3 61 465-546 2-64 (317)
31 PF02423 OCD_Mu_crystall: Orni 96.1 0.027 5.9E-07 60.2 9.4 140 408-554 64-225 (313)
32 TIGR02371 ala_DH_arch alanine 96.0 0.058 1.3E-06 58.0 11.9 140 408-554 64-223 (325)
33 PRK06407 ornithine cyclodeamin 96.0 0.035 7.5E-07 59.2 10.0 132 409-553 62-212 (301)
34 PRK07340 ornithine cyclodeamin 96.0 0.046 1E-06 58.2 10.9 138 409-554 62-218 (304)
35 PRK09186 flagellin modificatio 96.0 0.014 3.1E-07 58.5 6.6 44 463-508 4-49 (256)
36 PRK06949 short chain dehydroge 96.0 0.016 3.4E-07 58.3 6.6 46 460-507 6-53 (258)
37 cd01080 NAD_bind_m-THF_DH_Cycl 95.9 0.023 4.9E-07 55.8 7.3 85 449-558 28-120 (168)
38 PF00670 AdoHcyase_NAD: S-aden 95.9 0.019 4.1E-07 56.2 6.6 88 462-558 22-115 (162)
39 KOG1370 S-adenosylhomocysteine 95.8 0.022 4.7E-07 60.7 7.1 151 463-623 214-395 (434)
40 PRK12549 shikimate 5-dehydroge 95.8 0.023 5.1E-07 60.0 7.5 127 445-574 109-254 (284)
41 PRK08306 dipicolinate synthase 95.8 0.028 6.1E-07 59.7 8.0 87 462-557 151-244 (296)
42 cd05213 NAD_bind_Glutamyl_tRNA 95.8 0.016 3.5E-07 61.8 6.2 148 395-558 113-277 (311)
43 PRK06482 short chain dehydroge 95.8 0.023 4.9E-07 58.2 6.9 44 463-508 2-47 (276)
44 PRK05867 short chain dehydroge 95.7 0.019 4.1E-07 58.0 6.2 45 462-508 8-54 (253)
45 PRK12548 shikimate 5-dehydroge 95.7 0.027 5.8E-07 59.5 7.5 62 445-509 108-175 (289)
46 PRK08339 short chain dehydroge 95.7 0.017 3.8E-07 59.1 5.9 45 463-509 8-54 (263)
47 PRK08265 short chain dehydroge 95.7 0.025 5.4E-07 57.6 7.0 44 463-508 6-51 (261)
48 PRK06141 ornithine cyclodeamin 95.7 0.078 1.7E-06 56.7 10.9 138 409-553 62-219 (314)
49 COG1086 Predicted nucleoside-d 95.7 0.049 1.1E-06 62.4 9.6 146 362-546 146-323 (588)
50 PRK08063 enoyl-(acyl carrier p 95.7 0.021 4.5E-07 57.1 6.1 42 464-507 5-49 (250)
51 PRK06823 ornithine cyclodeamin 95.6 0.11 2.5E-06 55.7 11.6 139 409-554 64-223 (315)
52 PRK06046 alanine dehydrogenase 95.5 0.1 2.2E-06 56.1 11.2 141 408-554 65-224 (326)
53 PRK07454 short chain dehydroge 95.5 0.026 5.6E-07 56.4 6.2 43 463-507 6-50 (241)
54 PRK07523 gluconate 5-dehydroge 95.5 0.029 6.4E-07 56.5 6.6 45 462-508 9-55 (255)
55 PRK06196 oxidoreductase; Provi 95.5 0.026 5.7E-07 59.4 6.4 55 451-507 14-70 (315)
56 PRK06924 short chain dehydroge 95.5 0.031 6.8E-07 56.0 6.6 41 464-506 2-45 (251)
57 PRK07589 ornithine cyclodeamin 95.4 0.1 2.2E-06 56.9 10.7 139 408-553 65-225 (346)
58 PF03446 NAD_binding_2: NAD bi 95.4 0.0089 1.9E-07 57.5 2.3 102 464-575 2-124 (163)
59 PRK07478 short chain dehydroge 95.4 0.031 6.8E-07 56.3 6.2 44 463-508 6-51 (254)
60 PRK12429 3-hydroxybutyrate deh 95.4 0.033 7.2E-07 55.7 6.3 42 464-507 5-48 (258)
61 PRK07067 sorbitol dehydrogenas 95.3 0.044 9.6E-07 55.3 6.9 44 463-508 6-51 (257)
62 COG0373 HemA Glutamyl-tRNA red 95.2 0.024 5.1E-07 63.0 5.2 89 462-558 177-278 (414)
63 PRK07326 short chain dehydroge 95.2 0.039 8.4E-07 54.7 6.4 44 463-508 6-51 (237)
64 TIGR01963 PHB_DH 3-hydroxybuty 95.2 0.034 7.4E-07 55.6 6.0 42 464-507 2-45 (255)
65 PRK08267 short chain dehydroge 95.2 0.041 8.8E-07 55.7 6.6 43 464-508 2-46 (260)
66 PRK08643 acetoin reductase; Va 95.2 0.039 8.5E-07 55.6 6.3 43 464-508 3-47 (256)
67 TIGR00518 alaDH alanine dehydr 95.2 0.096 2.1E-06 57.4 9.7 92 463-558 167-271 (370)
68 PRK07890 short chain dehydroge 95.2 0.036 7.8E-07 55.7 5.9 44 463-508 5-50 (258)
69 PRK07231 fabG 3-ketoacyl-(acyl 95.2 0.051 1.1E-06 54.2 7.0 44 463-508 5-50 (251)
70 PRK06194 hypothetical protein; 95.2 0.038 8.2E-07 56.8 6.2 43 464-508 7-51 (287)
71 PRK07109 short chain dehydroge 95.2 0.038 8.1E-07 59.2 6.4 45 462-508 7-53 (334)
72 PRK06200 2,3-dihydroxy-2,3-dih 95.1 0.046 9.9E-07 55.5 6.7 44 463-508 6-51 (263)
73 PLN02780 ketoreductase/ oxidor 95.1 0.024 5.3E-07 60.4 4.9 45 463-509 53-99 (320)
74 PTZ00075 Adenosylhomocysteinas 95.1 0.086 1.9E-06 59.6 9.2 143 460-612 251-419 (476)
75 TIGR01035 hemA glutamyl-tRNA r 95.1 0.051 1.1E-06 60.4 7.2 151 462-628 179-357 (417)
76 PRK14175 bifunctional 5,10-met 95.0 0.07 1.5E-06 56.7 7.9 151 392-566 43-245 (286)
77 PRK08085 gluconate 5-dehydroge 95.0 0.054 1.2E-06 54.6 6.7 45 462-508 8-54 (254)
78 PRK09291 short chain dehydroge 95.0 0.047 1E-06 54.8 6.3 41 464-506 3-45 (257)
79 PRK06180 short chain dehydroge 95.0 0.057 1.2E-06 55.5 7.0 43 463-507 4-48 (277)
80 PRK06139 short chain dehydroge 95.0 0.041 8.9E-07 59.0 6.1 44 463-508 7-52 (330)
81 PRK05717 oxidoreductase; Valid 95.0 0.068 1.5E-06 54.0 7.3 44 462-507 9-54 (255)
82 PRK06124 gluconate 5-dehydroge 95.0 0.052 1.1E-06 54.7 6.4 45 461-507 9-55 (256)
83 PRK05866 short chain dehydroge 95.0 0.055 1.2E-06 56.6 6.8 43 463-507 40-84 (293)
84 PRK06199 ornithine cyclodeamin 94.9 0.17 3.6E-06 55.9 10.6 155 409-569 92-278 (379)
85 PRK06101 short chain dehydroge 94.9 0.038 8.2E-07 55.5 5.3 41 464-506 2-44 (240)
86 PRK06500 short chain dehydroge 94.9 0.063 1.4E-06 53.5 6.8 44 463-508 6-51 (249)
87 PRK08213 gluconate 5-dehydroge 94.9 0.057 1.2E-06 54.6 6.5 43 463-507 12-56 (259)
88 PRK14192 bifunctional 5,10-met 94.9 0.11 2.3E-06 55.2 8.7 126 389-557 100-234 (283)
89 PRK07774 short chain dehydroge 94.9 0.06 1.3E-06 53.8 6.5 43 463-507 6-50 (250)
90 COG2423 Predicted ornithine cy 94.9 0.13 2.8E-06 55.8 9.4 157 408-571 66-251 (330)
91 TIGR03325 BphB_TodD cis-2,3-di 94.8 0.067 1.5E-06 54.4 6.9 43 463-507 5-49 (262)
92 PRK10538 malonic semialdehyde 94.8 0.064 1.4E-06 54.0 6.7 42 465-508 2-45 (248)
93 COG0702 Predicted nucleoside-d 94.8 0.053 1.2E-06 54.7 6.1 38 465-504 2-41 (275)
94 PRK08416 7-alpha-hydroxysteroi 94.8 0.054 1.2E-06 55.1 6.0 43 463-507 8-53 (260)
95 TIGR02415 23BDH acetoin reduct 94.8 0.063 1.4E-06 53.8 6.4 42 464-507 1-44 (254)
96 PRK12826 3-ketoacyl-(acyl-carr 94.8 0.062 1.4E-06 53.4 6.3 43 463-507 6-50 (251)
97 TIGR01472 gmd GDP-mannose 4,6- 94.7 0.044 9.5E-07 58.2 5.4 29 464-494 1-29 (343)
98 PRK07102 short chain dehydroge 94.7 0.06 1.3E-06 53.9 6.1 42 464-507 2-45 (243)
99 PRK07097 gluconate 5-dehydroge 94.7 0.069 1.5E-06 54.3 6.6 49 458-508 5-55 (265)
100 PRK05653 fabG 3-ketoacyl-(acyl 94.7 0.066 1.4E-06 52.9 6.2 42 464-507 6-49 (246)
101 PRK08251 short chain dehydroge 94.6 0.078 1.7E-06 53.1 6.7 43 464-508 3-47 (248)
102 PLN02896 cinnamyl-alcohol dehy 94.6 0.09 2E-06 56.2 7.5 48 457-506 4-53 (353)
103 PLN02986 cinnamyl-alcohol dehy 94.6 0.064 1.4E-06 56.3 6.2 38 464-503 6-45 (322)
104 PRK07063 short chain dehydroge 94.6 0.044 9.4E-07 55.5 4.8 45 463-509 7-53 (260)
105 PRK07825 short chain dehydroge 94.6 0.051 1.1E-06 55.5 5.3 44 463-508 5-50 (273)
106 PRK07677 short chain dehydroge 94.5 0.074 1.6E-06 53.6 6.3 43 464-508 2-46 (252)
107 KOG1208 Dehydrogenases with di 94.5 0.053 1.1E-06 58.3 5.4 53 455-509 27-81 (314)
108 PF00106 adh_short: short chai 94.5 0.071 1.5E-06 49.9 5.7 43 464-508 1-48 (167)
109 PRK09072 short chain dehydroge 94.5 0.085 1.9E-06 53.5 6.7 43 463-507 5-49 (263)
110 PF05368 NmrA: NmrA-like famil 94.5 0.065 1.4E-06 53.7 5.7 39 466-506 1-43 (233)
111 PRK05854 short chain dehydroge 94.5 0.047 1E-06 57.7 5.0 44 463-508 14-59 (313)
112 PRK05557 fabG 3-ketoacyl-(acyl 94.5 0.088 1.9E-06 52.0 6.6 43 463-507 5-50 (248)
113 PRK12939 short chain dehydroge 94.5 0.084 1.8E-06 52.6 6.5 43 463-507 7-51 (250)
114 PRK05876 short chain dehydroge 94.5 0.08 1.7E-06 54.8 6.5 44 463-508 6-51 (275)
115 PRK07024 short chain dehydroge 94.5 0.063 1.4E-06 54.4 5.6 44 464-509 3-48 (257)
116 PRK06947 glucose-1-dehydrogena 94.5 0.08 1.7E-06 53.0 6.3 42 464-507 3-47 (248)
117 PRK07453 protochlorophyllide o 94.4 0.086 1.9E-06 55.6 6.7 44 463-508 6-51 (322)
118 cd05212 NAD_bind_m-THF_DH_Cycl 94.4 0.14 3E-06 48.9 7.4 71 458-553 23-100 (140)
119 PRK13394 3-hydroxybutyrate deh 94.4 0.087 1.9E-06 52.9 6.4 43 463-507 7-51 (262)
120 PF10520 Kua-UEV1_localn: Kua- 94.4 0.11 2.4E-06 51.6 6.9 55 215-274 99-156 (178)
121 PRK05476 S-adenosyl-L-homocyst 94.4 0.17 3.7E-06 56.7 9.1 138 460-609 209-373 (425)
122 PRK06172 short chain dehydroge 94.4 0.086 1.9E-06 53.0 6.3 43 463-507 7-51 (253)
123 PRK12746 short chain dehydroge 94.4 0.089 1.9E-06 52.8 6.4 42 464-507 7-51 (254)
124 PRK06138 short chain dehydroge 94.4 0.099 2.1E-06 52.2 6.7 44 463-508 5-50 (252)
125 PRK12384 sorbitol-6-phosphate 94.3 0.084 1.8E-06 53.3 6.2 42 464-507 3-46 (259)
126 PRK06935 2-deoxy-D-gluconate 3 94.3 0.095 2.1E-06 53.0 6.6 44 461-507 13-58 (258)
127 PRK07074 short chain dehydroge 94.3 0.097 2.1E-06 52.8 6.6 43 464-508 3-47 (257)
128 PRK08277 D-mannonate oxidoredu 94.3 0.083 1.8E-06 54.1 6.2 44 463-508 10-55 (278)
129 PRK08589 short chain dehydroge 94.3 0.078 1.7E-06 54.4 6.0 43 463-508 6-50 (272)
130 PRK08340 glucose-1-dehydrogena 94.3 0.054 1.2E-06 55.0 4.8 42 465-508 2-45 (259)
131 PRK07831 short chain dehydroge 94.3 0.087 1.9E-06 53.5 6.2 45 463-508 17-63 (262)
132 PRK05993 short chain dehydroge 94.3 0.064 1.4E-06 55.3 5.3 42 463-506 4-47 (277)
133 TIGR00561 pntA NAD(P) transhyd 94.2 0.13 2.8E-06 58.8 8.0 181 406-608 104-337 (511)
134 PRK05884 short chain dehydroge 94.2 0.067 1.4E-06 53.6 5.1 41 465-507 2-44 (223)
135 TIGR01809 Shik-DH-AROM shikima 94.2 0.15 3.3E-06 53.8 8.0 125 445-574 105-258 (282)
136 PRK12749 quinate/shikimate deh 94.2 0.14 2.9E-06 54.4 7.7 168 383-574 63-260 (288)
137 PRK06125 short chain dehydroge 94.2 0.088 1.9E-06 53.3 6.0 45 463-509 7-53 (259)
138 PRK05872 short chain dehydroge 94.2 0.081 1.8E-06 55.3 5.9 46 462-509 8-55 (296)
139 TIGR03206 benzo_BadH 2-hydroxy 94.2 0.1 2.2E-06 52.0 6.4 43 463-507 3-47 (250)
140 PLN02968 Probable N-acetyl-gam 94.2 0.072 1.6E-06 58.7 5.7 138 462-607 37-196 (381)
141 PRK06197 short chain dehydroge 94.1 0.092 2E-06 54.9 6.2 44 462-507 15-60 (306)
142 PRK07814 short chain dehydroge 94.1 0.11 2.4E-06 52.9 6.6 44 462-507 9-54 (263)
143 PRK05650 short chain dehydroge 94.1 0.1 2.2E-06 53.3 6.3 41 465-507 2-44 (270)
144 PRK05599 hypothetical protein; 94.1 0.09 2E-06 53.3 5.9 42 465-509 2-45 (246)
145 PRK09135 pteridine reductase; 94.1 0.1 2.2E-06 51.8 6.2 43 463-507 6-51 (249)
146 COG2910 Putative NADH-flavin r 94.1 0.11 2.4E-06 52.0 6.3 141 465-609 2-201 (211)
147 PRK08017 oxidoreductase; Provi 94.1 0.074 1.6E-06 53.4 5.2 40 464-505 3-44 (256)
148 PRK07666 fabG 3-ketoacyl-(acyl 94.1 0.12 2.6E-06 51.5 6.6 43 463-507 7-51 (239)
149 PF02719 Polysacc_synt_2: Poly 94.1 0.068 1.5E-06 57.0 5.0 78 466-553 1-86 (293)
150 PRK07062 short chain dehydroge 94.1 0.067 1.4E-06 54.3 4.8 46 462-509 7-54 (265)
151 KOG1205 Predicted dehydrogenas 94.0 0.069 1.5E-06 56.6 4.9 43 463-507 12-56 (282)
152 PRK14027 quinate/shikimate deh 94.0 0.22 4.7E-06 52.8 8.7 63 445-510 109-174 (283)
153 TIGR02992 ectoine_eutC ectoine 94.0 0.14 3.1E-06 55.0 7.4 117 430-553 86-224 (326)
154 PRK12936 3-ketoacyl-(acyl-carr 94.0 0.14 3E-06 50.9 6.8 43 463-507 6-50 (245)
155 PRK07775 short chain dehydroge 94.0 0.13 2.8E-06 52.9 6.7 44 462-507 9-54 (274)
156 PRK12829 short chain dehydroge 94.0 0.083 1.8E-06 53.2 5.3 45 462-508 10-56 (264)
157 PRK14179 bifunctional 5,10-met 93.9 0.079 1.7E-06 56.3 5.2 148 393-566 44-245 (284)
158 PRK00676 hemA glutamyl-tRNA re 93.9 0.089 1.9E-06 57.2 5.7 137 395-558 110-265 (338)
159 PRK06484 short chain dehydroge 93.9 0.13 2.8E-06 57.8 7.1 46 462-509 268-315 (520)
160 PLN02253 xanthoxin dehydrogena 93.8 0.12 2.7E-06 52.9 6.3 45 463-509 18-64 (280)
161 PRK06181 short chain dehydroge 93.8 0.13 2.9E-06 51.9 6.4 42 464-507 2-45 (263)
162 PRK07576 short chain dehydroge 93.8 0.14 3.1E-06 52.3 6.7 44 462-507 8-53 (264)
163 PRK06057 short chain dehydroge 93.8 0.1 2.2E-06 52.8 5.4 44 463-508 7-52 (255)
164 PRK06182 short chain dehydroge 93.8 0.099 2.2E-06 53.5 5.5 41 463-505 3-45 (273)
165 PRK08642 fabG 3-ketoacyl-(acyl 93.7 0.17 3.7E-06 50.6 6.9 44 463-508 5-51 (253)
166 PRK12825 fabG 3-ketoacyl-(acyl 93.7 0.13 2.9E-06 50.6 6.1 41 464-506 7-50 (249)
167 PLN00198 anthocyanidin reducta 93.7 0.14 2.9E-06 54.3 6.5 42 459-502 5-48 (338)
168 PLN02583 cinnamoyl-CoA reducta 93.7 0.18 3.9E-06 52.8 7.3 31 462-494 5-35 (297)
169 PRK07806 short chain dehydroge 93.6 0.15 3.2E-06 51.0 6.3 43 463-507 6-51 (248)
170 PRK08862 short chain dehydroge 93.6 0.11 2.3E-06 52.6 5.2 43 463-507 5-49 (227)
171 PRK12742 oxidoreductase; Provi 93.6 0.11 2.5E-06 51.4 5.4 44 463-508 6-52 (237)
172 PF01210 NAD_Gly3P_dh_N: NAD-d 93.6 0.19 4.1E-06 48.2 6.7 63 465-531 1-75 (157)
173 PRK12828 short chain dehydroge 93.5 0.11 2.4E-06 51.2 5.2 41 463-505 7-49 (239)
174 PRK08703 short chain dehydroge 93.5 0.098 2.1E-06 52.2 4.9 43 463-507 6-50 (239)
175 PLN02662 cinnamyl-alcohol dehy 93.5 0.12 2.5E-06 54.0 5.6 34 464-499 5-40 (322)
176 PRK08628 short chain dehydroge 93.5 0.15 3.3E-06 51.4 6.3 42 462-506 6-49 (258)
177 TIGR01289 LPOR light-dependent 93.5 0.19 4.1E-06 53.2 7.1 44 463-508 3-49 (314)
178 PRK05875 short chain dehydroge 93.5 0.13 2.9E-06 52.4 5.8 44 462-507 6-51 (276)
179 PRK12550 shikimate 5-dehydroge 93.4 0.22 4.7E-06 52.6 7.4 60 445-508 105-167 (272)
180 PRK14174 bifunctional 5,10-met 93.4 0.49 1.1E-05 50.6 10.1 140 393-557 43-238 (295)
181 PRK08303 short chain dehydroge 93.4 0.14 3E-06 54.2 6.1 43 463-507 8-62 (305)
182 TIGR03589 PseB UDP-N-acetylglu 93.4 0.18 3.8E-06 53.7 6.8 42 464-507 5-50 (324)
183 COG0451 WcaG Nucleoside-diphos 93.4 0.064 1.4E-06 55.2 3.3 101 465-601 2-108 (314)
184 PRK08263 short chain dehydroge 93.3 0.13 2.9E-06 52.7 5.5 43 464-508 4-48 (275)
185 PRK08177 short chain dehydroge 93.3 0.11 2.4E-06 51.5 4.8 40 464-505 2-43 (225)
186 TIGR01832 kduD 2-deoxy-D-gluco 93.2 0.18 3.8E-06 50.5 6.1 31 462-494 4-34 (248)
187 PLN02427 UDP-apiose/xylose syn 93.2 0.19 4.2E-06 54.4 6.8 44 459-504 10-56 (386)
188 PRK08945 putative oxoacyl-(acy 93.1 0.12 2.6E-06 51.9 4.8 45 462-508 11-57 (247)
189 PRK14185 bifunctional 5,10-met 93.1 0.53 1.2E-05 50.3 9.8 140 392-557 42-236 (293)
190 PRK09134 short chain dehydroge 93.1 0.22 4.8E-06 50.3 6.8 44 462-507 8-54 (258)
191 PRK00066 ldh L-lactate dehydro 93.1 0.092 2E-06 56.3 4.1 67 462-531 5-79 (315)
192 PRK05786 fabG 3-ketoacyl-(acyl 93.1 0.15 3.2E-06 50.6 5.3 42 464-507 6-49 (238)
193 PRK07035 short chain dehydroge 93.1 0.15 3.2E-06 51.3 5.3 44 463-508 8-53 (252)
194 PRK07832 short chain dehydroge 93.1 0.14 3.1E-06 52.3 5.3 42 464-507 1-44 (272)
195 PRK05693 short chain dehydroge 93.0 0.14 3.1E-06 52.3 5.3 41 464-506 2-44 (274)
196 PRK06914 short chain dehydroge 93.0 0.15 3.3E-06 52.1 5.4 42 464-507 4-47 (280)
197 PLN02650 dihydroflavonol-4-red 93.0 0.19 4E-06 53.6 6.3 42 462-505 4-47 (351)
198 PRK07985 oxidoreductase; Provi 93.0 0.19 4.1E-06 52.6 6.1 42 463-506 49-94 (294)
199 PRK06953 short chain dehydroge 93.0 0.14 3.1E-06 50.6 5.0 40 464-505 2-43 (222)
200 PRK12827 short chain dehydroge 93.0 0.22 4.8E-06 49.4 6.3 43 463-507 6-54 (249)
201 PRK08278 short chain dehydroge 92.9 0.17 3.8E-06 52.0 5.8 34 463-498 6-41 (273)
202 PRK12937 short chain dehydroge 92.9 0.24 5.3E-06 49.2 6.6 42 463-506 5-49 (245)
203 PLN02686 cinnamoyl-CoA reducta 92.9 0.22 4.7E-06 54.1 6.7 42 461-504 51-94 (367)
204 TIGR01746 Thioester-redct thio 92.9 0.15 3.3E-06 53.3 5.4 32 465-498 1-36 (367)
205 PRK08291 ectoine utilization p 92.9 0.29 6.2E-06 52.7 7.5 116 431-553 90-227 (330)
206 PRK14190 bifunctional 5,10-met 92.8 0.19 4.2E-06 53.4 6.0 149 392-566 43-245 (284)
207 PLN02494 adenosylhomocysteinas 92.8 0.74 1.6E-05 52.3 10.9 156 442-610 232-418 (477)
208 PF02826 2-Hacid_dh_C: D-isome 92.8 0.21 4.5E-06 48.9 5.8 86 462-558 35-135 (178)
209 PRK12743 oxidoreductase; Provi 92.8 0.22 4.8E-06 50.4 6.3 42 464-507 3-47 (256)
210 PRK08690 enoyl-(acyl carrier p 92.8 0.22 4.9E-06 50.9 6.3 32 463-494 6-37 (261)
211 PRK07060 short chain dehydroge 92.8 0.2 4.4E-06 49.8 5.8 44 462-507 8-53 (245)
212 PF01118 Semialdhyde_dh: Semia 92.7 0.19 4E-06 46.1 5.0 98 465-567 1-109 (121)
213 PRK06123 short chain dehydroge 92.7 0.23 5E-06 49.6 6.1 42 464-507 3-47 (248)
214 PRK12481 2-deoxy-D-gluconate 3 92.7 0.2 4.4E-06 50.8 5.8 31 462-494 7-37 (251)
215 PRK09730 putative NAD(P)-bindi 92.7 0.25 5.4E-06 49.1 6.3 41 464-506 2-45 (247)
216 PRK06128 oxidoreductase; Provi 92.7 0.2 4.4E-06 52.3 5.9 30 463-494 55-84 (300)
217 PRK09242 tropinone reductase; 92.6 0.18 4E-06 50.9 5.3 43 463-507 9-53 (257)
218 PRK07904 short chain dehydroge 92.5 0.16 3.4E-06 51.9 4.7 44 463-508 8-55 (253)
219 PLN00141 Tic62-NAD(P)-related 92.5 0.17 3.7E-06 51.4 4.9 39 463-503 17-57 (251)
220 PRK12745 3-ketoacyl-(acyl-carr 92.5 0.27 5.8E-06 49.3 6.3 29 464-494 3-31 (256)
221 PRK09496 trkA potassium transp 92.5 0.45 9.7E-06 52.6 8.6 85 407-507 178-274 (453)
222 PRK14194 bifunctional 5,10-met 92.5 0.3 6.4E-06 52.4 6.8 160 393-579 45-267 (301)
223 PF02737 3HCDH_N: 3-hydroxyacy 92.4 0.24 5.1E-06 48.9 5.7 39 465-506 1-41 (180)
224 PRK06198 short chain dehydroge 92.4 0.27 5.9E-06 49.5 6.3 43 463-507 6-51 (260)
225 PRK08264 short chain dehydroge 92.4 0.17 3.6E-06 50.4 4.6 37 463-501 6-45 (238)
226 TIGR00936 ahcY adenosylhomocys 92.4 0.48 1E-05 52.8 8.5 157 441-610 172-357 (406)
227 PRK05565 fabG 3-ketoacyl-(acyl 92.4 0.32 6.9E-06 48.2 6.6 43 463-507 5-50 (247)
228 PLN02214 cinnamoyl-CoA reducta 92.3 0.31 6.6E-06 52.2 6.8 35 463-499 10-46 (342)
229 PRK08217 fabG 3-ketoacyl-(acyl 92.3 0.29 6.2E-06 48.7 6.2 43 463-507 5-49 (253)
230 PRK06484 short chain dehydroge 92.3 0.3 6.5E-06 54.9 7.1 46 462-509 4-51 (520)
231 PRK06603 enoyl-(acyl carrier p 92.3 0.26 5.6E-06 50.4 6.0 43 464-506 9-56 (260)
232 KOG0725 Reductases with broad 92.2 0.31 6.6E-06 51.2 6.5 44 462-507 7-52 (270)
233 PRK08936 glucose-1-dehydrogena 92.2 0.31 6.7E-06 49.4 6.4 43 463-507 7-52 (261)
234 PRK07370 enoyl-(acyl carrier p 92.2 0.26 5.6E-06 50.4 5.8 32 463-494 6-37 (258)
235 PRK07792 fabG 3-ketoacyl-(acyl 92.2 0.32 7E-06 51.2 6.7 44 462-507 11-57 (306)
236 PLN02989 cinnamyl-alcohol dehy 92.1 0.27 5.9E-06 51.5 6.1 39 463-503 5-45 (325)
237 PRK06113 7-alpha-hydroxysteroi 92.1 0.24 5.2E-06 50.0 5.5 44 462-507 10-55 (255)
238 cd01076 NAD_bind_1_Glu_DH NAD( 92.1 0.88 1.9E-05 46.8 9.5 79 462-544 30-128 (227)
239 PRK06841 short chain dehydroge 92.1 0.25 5.4E-06 49.7 5.5 36 462-499 14-51 (255)
240 PRK06505 enoyl-(acyl carrier p 92.1 0.24 5.2E-06 51.2 5.5 35 463-497 7-43 (271)
241 TIGR02685 pter_reduc_Leis pter 92.1 0.24 5.2E-06 50.6 5.4 43 464-508 2-47 (267)
242 KOG1502 Flavonol reductase/cin 92.1 0.18 4E-06 54.5 4.7 38 462-501 5-44 (327)
243 PLN02730 enoyl-[acyl-carrier-p 92.1 0.22 4.8E-06 53.1 5.3 47 462-508 8-55 (303)
244 PRK07889 enoyl-(acyl carrier p 92.0 0.33 7.2E-06 49.5 6.4 45 463-509 7-57 (256)
245 PRK07023 short chain dehydroge 92.0 0.31 6.7E-06 48.8 6.1 33 464-498 2-36 (243)
246 PRK07201 short chain dehydroge 92.0 0.27 5.9E-06 56.8 6.4 43 463-507 371-415 (657)
247 PRK06997 enoyl-(acyl carrier p 92.0 0.24 5.2E-06 50.7 5.4 46 463-508 6-56 (260)
248 PRK09260 3-hydroxybutyryl-CoA 92.0 0.26 5.7E-06 51.6 5.7 92 464-558 2-123 (288)
249 COG1748 LYS9 Saccharopine dehy 92.0 0.26 5.6E-06 54.6 5.8 88 464-554 2-100 (389)
250 PRK07819 3-hydroxybutyryl-CoA 91.9 0.17 3.7E-06 53.4 4.2 88 464-554 6-122 (286)
251 TIGR01500 sepiapter_red sepiap 91.9 0.21 4.5E-06 50.7 4.7 43 465-509 2-50 (256)
252 PLN03139 formate dehydrogenase 91.9 0.094 2E-06 58.0 2.3 99 461-569 197-322 (386)
253 PRK15461 NADH-dependent gamma- 91.9 0.18 3.9E-06 53.3 4.4 102 465-576 3-126 (296)
254 PRK06114 short chain dehydroge 91.8 0.37 8.1E-06 48.7 6.5 44 462-507 7-53 (254)
255 PRK14178 bifunctional 5,10-met 91.8 0.62 1.3E-05 49.5 8.2 141 393-557 38-227 (279)
256 PRK08594 enoyl-(acyl carrier p 91.8 0.26 5.6E-06 50.4 5.3 46 463-508 7-57 (257)
257 PRK07069 short chain dehydroge 91.8 0.2 4.4E-06 49.9 4.4 41 466-508 2-45 (251)
258 PRK14189 bifunctional 5,10-met 91.7 0.34 7.3E-06 51.6 6.2 146 394-565 45-244 (285)
259 PRK14193 bifunctional 5,10-met 91.7 0.45 9.7E-06 50.7 7.0 161 393-579 44-264 (284)
260 PRK06179 short chain dehydroge 91.7 0.2 4.4E-06 50.9 4.4 35 464-500 5-41 (270)
261 PRK12823 benD 1,6-dihydroxycyc 91.6 0.37 8E-06 48.6 6.1 42 463-507 8-51 (260)
262 PRK08219 short chain dehydroge 91.6 0.25 5.4E-06 48.4 4.8 41 464-507 4-46 (227)
263 PF01262 AlaDh_PNT_C: Alanine 91.6 0.31 6.7E-06 47.2 5.3 92 463-558 20-143 (168)
264 PRK05855 short chain dehydroge 91.5 0.38 8.2E-06 54.1 6.7 44 462-507 314-359 (582)
265 PRK06463 fabG 3-ketoacyl-(acyl 91.5 0.28 6.2E-06 49.5 5.2 41 463-505 7-50 (255)
266 cd01075 NAD_bind_Leu_Phe_Val_D 91.5 0.96 2.1E-05 45.4 8.9 148 462-634 27-186 (200)
267 PF10727 Rossmann-like: Rossma 91.5 0.21 4.7E-06 46.9 3.9 66 463-537 10-83 (127)
268 COG2085 Predicted dinucleotide 91.4 0.71 1.5E-05 47.2 7.8 147 467-635 4-176 (211)
269 TIGR01831 fabG_rel 3-oxoacyl-( 91.4 0.35 7.5E-06 48.1 5.6 40 466-507 1-43 (239)
270 PRK09310 aroDE bifunctional 3- 91.3 0.42 9E-06 54.2 6.8 61 445-508 314-376 (477)
271 PRK15181 Vi polysaccharide bio 91.3 0.4 8.6E-06 51.4 6.3 31 462-494 14-44 (348)
272 PRK12744 short chain dehydroge 91.2 0.26 5.7E-06 49.8 4.6 30 463-494 8-37 (257)
273 PF03807 F420_oxidored: NADP o 91.2 0.43 9.4E-06 41.2 5.3 58 465-531 1-67 (96)
274 PRK07791 short chain dehydroge 91.2 0.44 9.6E-06 49.6 6.4 44 463-508 6-60 (286)
275 PRK12747 short chain dehydroge 91.2 0.29 6.3E-06 49.3 4.9 43 463-507 4-49 (252)
276 PRK14191 bifunctional 5,10-met 91.2 0.43 9.4E-06 50.8 6.3 149 393-565 43-243 (285)
277 PRK14187 bifunctional 5,10-met 91.2 0.34 7.4E-06 51.8 5.5 138 394-557 45-235 (294)
278 TIGR01829 AcAcCoA_reduct aceto 91.1 0.44 9.6E-06 47.1 6.0 41 464-506 1-44 (242)
279 PRK08226 short chain dehydroge 91.1 0.47 1E-05 48.0 6.3 33 463-497 6-40 (263)
280 PRK12938 acetyacetyl-CoA reduc 91.1 0.54 1.2E-05 46.9 6.6 30 463-494 3-32 (246)
281 PRK14170 bifunctional 5,10-met 91.0 0.4 8.7E-06 51.0 5.9 148 392-565 42-243 (284)
282 TIGR00658 orni_carb_tr ornithi 91.0 2.2 4.7E-05 45.8 11.5 158 406-572 61-267 (304)
283 PRK14182 bifunctional 5,10-met 91.0 0.41 8.8E-06 50.9 5.8 160 394-579 43-262 (282)
284 PRK06701 short chain dehydroge 90.9 0.45 9.8E-06 49.7 6.1 42 463-506 46-90 (290)
285 PRK07041 short chain dehydroge 90.9 0.29 6.4E-06 48.3 4.5 40 467-508 1-42 (230)
286 PLN02657 3,8-divinyl protochlo 90.8 0.37 8.1E-06 52.9 5.7 42 457-500 54-97 (390)
287 PLN02520 bifunctional 3-dehydr 90.8 0.68 1.5E-05 53.3 7.9 44 462-508 378-423 (529)
288 TIGR01505 tartro_sem_red 2-hyd 90.7 0.31 6.8E-06 51.0 4.8 97 466-572 2-120 (291)
289 PRK14180 bifunctional 5,10-met 90.7 0.49 1.1E-05 50.4 6.1 151 392-566 42-244 (282)
290 PRK08268 3-hydroxy-acyl-CoA de 90.7 0.51 1.1E-05 54.0 6.7 94 462-558 6-128 (507)
291 PRK12935 acetoacetyl-CoA reduc 90.7 0.34 7.4E-06 48.4 4.8 43 463-507 6-51 (247)
292 TIGR03649 ergot_EASG ergot alk 90.6 0.21 4.6E-06 51.4 3.4 34 465-500 1-36 (285)
293 PRK06483 dihydromonapterin red 90.6 0.41 8.9E-06 47.6 5.2 35 463-499 2-38 (236)
294 PRK06720 hypothetical protein; 90.5 0.42 9.2E-06 46.6 5.1 44 462-507 15-60 (169)
295 PRK14171 bifunctional 5,10-met 90.5 0.52 1.1E-05 50.3 6.1 146 394-565 45-245 (288)
296 PRK14184 bifunctional 5,10-met 90.4 0.53 1.2E-05 50.1 6.1 146 394-565 44-246 (286)
297 TIGR02279 PaaC-3OHAcCoADH 3-hy 90.4 0.97 2.1E-05 51.7 8.7 92 464-558 6-126 (503)
298 PRK14166 bifunctional 5,10-met 90.4 0.53 1.2E-05 50.0 6.1 161 393-579 42-262 (282)
299 PRK12859 3-ketoacyl-(acyl-carr 90.4 0.6 1.3E-05 47.4 6.3 32 463-494 6-37 (256)
300 PRK08159 enoyl-(acyl carrier p 90.3 0.46 1E-05 49.2 5.5 46 463-508 10-60 (272)
301 PRK10217 dTDP-glucose 4,6-dehy 90.2 0.41 8.8E-06 50.9 5.2 29 464-494 2-30 (355)
302 PRK14173 bifunctional 5,10-met 90.1 0.5 1.1E-05 50.4 5.6 140 392-557 40-230 (287)
303 PRK06079 enoyl-(acyl carrier p 90.1 0.44 9.6E-06 48.4 5.1 43 463-506 7-51 (252)
304 cd00401 AdoHcyase S-adenosyl-L 90.1 1.3 2.9E-05 49.5 9.2 102 442-555 180-291 (413)
305 PRK07577 short chain dehydroge 90.1 0.33 7.1E-06 48.0 4.0 33 464-498 4-38 (234)
306 PRK07984 enoyl-(acyl carrier p 90.1 0.48 1E-05 48.9 5.4 31 464-494 7-37 (262)
307 PRK08993 2-deoxy-D-gluconate 3 90.1 0.4 8.7E-06 48.5 4.7 32 461-494 8-39 (253)
308 PRK07856 short chain dehydroge 90.1 0.35 7.6E-06 48.7 4.3 36 462-499 5-42 (252)
309 PRK08415 enoyl-(acyl carrier p 89.9 0.5 1.1E-05 49.1 5.4 46 463-508 5-55 (274)
310 PRK07530 3-hydroxybutyryl-CoA 89.8 0.72 1.6E-05 48.4 6.6 39 464-505 5-45 (292)
311 PRK12748 3-ketoacyl-(acyl-carr 89.8 0.69 1.5E-05 46.7 6.2 32 463-494 5-36 (256)
312 PRK14176 bifunctional 5,10-met 89.8 0.73 1.6E-05 49.2 6.5 138 395-557 52-239 (287)
313 PRK14169 bifunctional 5,10-met 89.8 0.47 1E-05 50.5 5.1 147 393-565 42-242 (282)
314 PRK06940 short chain dehydroge 89.8 0.66 1.4E-05 47.9 6.1 41 464-508 3-45 (275)
315 PF03435 Saccharop_dh: Sacchar 89.7 0.5 1.1E-05 51.5 5.4 85 466-553 1-98 (386)
316 COG0499 SAM1 S-adenosylhomocys 89.7 0.85 1.8E-05 50.0 6.9 151 462-622 208-388 (420)
317 PRK08655 prephenate dehydrogen 89.6 0.83 1.8E-05 51.3 7.1 83 465-555 2-94 (437)
318 PLN02545 3-hydroxybutyryl-CoA 89.5 0.63 1.4E-05 48.9 5.9 92 464-558 5-125 (295)
319 PF02882 THF_DHG_CYH_C: Tetrah 89.5 0.55 1.2E-05 45.9 5.0 79 451-553 19-108 (160)
320 PRK07533 enoyl-(acyl carrier p 89.5 0.61 1.3E-05 47.6 5.5 46 462-507 9-59 (258)
321 cd08270 MDR4 Medium chain dehy 89.5 1.3 2.9E-05 45.4 8.1 87 463-554 133-223 (305)
322 TIGR01830 3oxo_ACP_reduc 3-oxo 89.3 0.63 1.4E-05 45.9 5.4 40 466-507 1-43 (239)
323 PRK01713 ornithine carbamoyltr 89.3 1.9 4.1E-05 46.9 9.4 164 406-571 68-277 (334)
324 PRK14188 bifunctional 5,10-met 89.3 0.47 1E-05 50.8 4.7 100 393-494 44-187 (296)
325 TIGR02622 CDP_4_6_dhtase CDP-g 89.2 0.65 1.4E-05 49.6 5.8 36 464-501 5-42 (349)
326 PRK06523 short chain dehydroge 89.2 0.5 1.1E-05 47.7 4.7 35 462-498 8-44 (260)
327 PRK14618 NAD(P)H-dependent gly 89.1 1 2.2E-05 48.1 7.2 92 464-558 5-110 (328)
328 PLN02778 3,5-epimerase/4-reduc 89.1 0.56 1.2E-05 49.4 5.1 36 457-494 2-38 (298)
329 KOG0409 Predicted dehydrogenas 89.0 0.57 1.2E-05 50.2 5.0 147 440-598 15-184 (327)
330 COG1090 Predicted nucleoside-d 88.9 0.42 9.2E-06 50.7 3.9 64 466-538 1-71 (297)
331 PRK07424 bifunctional sterol d 88.9 0.58 1.3E-05 52.1 5.3 38 463-502 178-217 (406)
332 COG3268 Uncharacterized conser 88.9 0.43 9.4E-06 51.7 4.0 66 463-530 6-76 (382)
333 PRK10792 bifunctional 5,10-met 88.8 1.1 2.3E-05 47.9 6.9 139 393-557 45-234 (285)
334 PRK12824 acetoacetyl-CoA reduc 88.8 1.1 2.4E-05 44.4 6.7 29 464-494 3-31 (245)
335 PRK14172 bifunctional 5,10-met 88.7 0.76 1.7E-05 48.8 5.7 147 394-566 45-244 (278)
336 PRK07417 arogenate dehydrogena 88.7 0.94 2E-05 47.4 6.4 85 465-558 2-96 (279)
337 PRK14186 bifunctional 5,10-met 88.6 0.73 1.6E-05 49.4 5.6 139 393-557 44-233 (297)
338 PRK06398 aldose dehydrogenase; 88.6 0.48 1E-05 48.3 4.1 34 463-498 6-41 (258)
339 PRK08324 short chain dehydroge 88.6 0.84 1.8E-05 53.8 6.6 45 463-509 422-468 (681)
340 PRK15057 UDP-glucose 6-dehydro 88.5 1.2 2.7E-05 49.2 7.4 124 465-596 2-162 (388)
341 PRK06077 fabG 3-ketoacyl-(acyl 88.4 0.6 1.3E-05 46.6 4.6 30 463-494 6-35 (252)
342 PLN02653 GDP-mannose 4,6-dehyd 88.4 0.85 1.8E-05 48.3 5.9 30 463-494 6-35 (340)
343 PRK14183 bifunctional 5,10-met 88.2 0.91 2E-05 48.3 5.9 163 393-579 43-262 (281)
344 PRK11559 garR tartronate semia 88.2 0.76 1.6E-05 48.2 5.3 85 464-558 3-101 (296)
345 PRK14177 bifunctional 5,10-met 88.1 0.8 1.7E-05 48.8 5.4 138 394-557 46-234 (284)
346 COG0111 SerA Phosphoglycerate 88.0 0.94 2E-05 49.0 6.0 83 463-554 142-234 (324)
347 TIGR03466 HpnA hopanoid-associ 88.0 0.39 8.4E-06 49.9 3.0 34 465-500 2-37 (328)
348 PRK00779 ornithine carbamoyltr 87.9 3.1 6.7E-05 44.6 9.8 162 405-572 64-268 (304)
349 PLN02516 methylenetetrahydrofo 87.8 0.88 1.9E-05 48.8 5.6 139 393-557 51-242 (299)
350 PRK14181 bifunctional 5,10-met 87.8 1.3 2.8E-05 47.3 6.8 139 393-557 38-232 (287)
351 PLN00015 protochlorophyllide r 87.8 0.97 2.1E-05 47.6 5.9 40 467-508 1-43 (308)
352 smart00859 Semialdhyde_dh Semi 87.8 1.5 3.3E-05 39.8 6.5 86 465-553 1-99 (122)
353 PLN02616 tetrahydrofolate dehy 87.8 0.8 1.7E-05 50.3 5.3 140 392-557 114-306 (364)
354 PRK06171 sorbitol-6-phosphate 87.7 0.56 1.2E-05 47.6 3.9 35 463-499 9-45 (266)
355 PRK14168 bifunctional 5,10-met 87.7 0.85 1.9E-05 48.9 5.4 139 393-557 45-240 (297)
356 PF00056 Ldh_1_N: lactate/mala 87.5 1.4 3.1E-05 41.7 6.3 65 465-531 2-75 (141)
357 PRK12562 ornithine carbamoyltr 87.3 2.6 5.6E-05 45.9 8.9 165 406-572 67-278 (334)
358 PRK07574 formate dehydrogenase 87.3 0.95 2.1E-05 50.2 5.6 99 462-569 191-315 (385)
359 cd05293 LDH_1 A subgroup of L- 87.2 0.5 1.1E-05 50.7 3.4 66 463-531 3-77 (312)
360 PLN02695 GDP-D-mannose-3',5'-e 87.1 0.7 1.5E-05 50.2 4.4 31 462-494 20-50 (370)
361 PLN02928 oxidoreductase family 87.1 1.4 2.9E-05 48.1 6.6 94 462-558 158-270 (347)
362 TIGR02632 RhaD_aldol-ADH rhamn 87.1 0.92 2E-05 53.6 5.7 45 462-508 413-459 (676)
363 PLN03154 putative allyl alcoho 87.0 2.3 5E-05 45.7 8.3 101 448-553 142-258 (348)
364 PRK07066 3-hydroxybutyryl-CoA 87.0 1.3 2.8E-05 47.9 6.4 86 462-550 6-116 (321)
365 PRK08309 short chain dehydroge 87.0 0.87 1.9E-05 44.9 4.6 41 465-508 2-44 (177)
366 cd05191 NAD_bind_amino_acid_DH 86.9 1.7 3.6E-05 37.5 5.8 30 462-494 22-52 (86)
367 PF01073 3Beta_HSD: 3-beta hyd 86.7 0.62 1.3E-05 49.0 3.7 65 467-547 1-67 (280)
368 PRK10675 UDP-galactose-4-epime 86.7 0.92 2E-05 47.7 4.9 28 465-494 2-29 (338)
369 PRK02102 ornithine carbamoyltr 86.6 7.7 0.00017 42.3 12.0 167 399-571 64-275 (331)
370 PLN02897 tetrahydrofolate dehy 86.6 0.99 2.2E-05 49.3 5.2 82 450-557 196-289 (345)
371 cd05311 NAD_bind_2_malic_enz N 86.5 1.1 2.3E-05 46.0 5.1 110 462-581 24-161 (226)
372 TIGR01915 npdG NADPH-dependent 86.3 1.2 2.6E-05 45.0 5.3 40 465-506 2-43 (219)
373 COG2084 MmsB 3-hydroxyisobutyr 86.2 0.61 1.3E-05 49.7 3.3 102 465-576 2-126 (286)
374 PRK08293 3-hydroxybutyryl-CoA 86.1 1.1 2.4E-05 47.0 5.2 40 464-506 4-45 (287)
375 PLN02240 UDP-glucose 4-epimera 86.1 1.2 2.5E-05 47.2 5.4 29 464-494 6-34 (352)
376 TIGR01181 dTDP_gluc_dehyt dTDP 85.8 1.3 2.8E-05 45.5 5.5 28 465-494 1-30 (317)
377 PRK02255 putrescine carbamoylt 85.8 8 0.00017 42.3 11.6 162 406-572 64-275 (338)
378 PRK09496 trkA potassium transp 85.5 2.1 4.6E-05 47.3 7.2 39 465-506 2-42 (453)
379 PLN02527 aspartate carbamoyltr 85.4 6.9 0.00015 42.1 10.8 159 406-570 61-267 (306)
380 PLN00112 malate dehydrogenase 85.4 1.1 2.4E-05 50.5 5.0 66 463-531 100-182 (444)
381 TIGR03026 NDP-sugDHase nucleot 85.4 2.8 6.1E-05 46.4 8.2 110 465-577 2-160 (411)
382 PRK08261 fabG 3-ketoacyl-(acyl 85.3 1.5 3.2E-05 48.7 5.9 45 462-508 209-257 (450)
383 PF13561 adh_short_C2: Enoyl-( 85.2 1.1 2.3E-05 45.1 4.4 39 470-508 1-45 (241)
384 cd08294 leukotriene_B4_DH_like 85.2 2.7 5.9E-05 43.7 7.5 55 449-505 128-186 (329)
385 TIGR00872 gnd_rel 6-phosphoglu 85.1 1.4 3.1E-05 46.6 5.5 102 465-573 2-121 (298)
386 PRK14167 bifunctional 5,10-met 85.1 1.5 3.2E-05 47.1 5.5 138 394-557 44-236 (297)
387 COG1028 FabG Dehydrogenases wi 85.0 1.5 3.2E-05 43.9 5.3 45 462-508 4-52 (251)
388 PRK12367 short chain dehydroge 84.9 1.2 2.6E-05 45.7 4.6 33 463-497 14-48 (245)
389 PRK08125 bifunctional UDP-gluc 84.7 2.9 6.3E-05 49.2 8.2 31 462-494 314-345 (660)
390 COG0569 TrkA K+ transport syst 84.7 2.4 5.1E-05 43.4 6.6 36 464-502 1-38 (225)
391 PRK08220 2,3-dihydroxybenzoate 84.6 1.2 2.6E-05 44.5 4.4 31 462-494 7-37 (252)
392 PRK06550 fabG 3-ketoacyl-(acyl 84.5 1 2.2E-05 44.6 3.9 30 463-494 5-34 (235)
393 COG0686 Ald Alanine dehydrogen 84.3 1.4 3.1E-05 47.6 4.9 120 424-571 151-293 (371)
394 PRK12490 6-phosphogluconate de 84.2 2.7 5.8E-05 44.5 7.0 103 465-577 2-126 (299)
395 TIGR01777 yfcH conserved hypot 84.2 0.8 1.7E-05 46.7 3.0 33 466-500 1-35 (292)
396 PF01370 Epimerase: NAD depend 84.1 1.6 3.5E-05 42.9 5.0 27 466-494 1-27 (236)
397 PF02254 TrkA_N: TrkA-N domain 84.1 3.9 8.4E-05 36.4 7.0 39 466-507 1-41 (116)
398 COG3967 DltE Short-chain dehyd 84.1 1.7 3.7E-05 44.6 5.1 44 464-509 6-51 (245)
399 cd05276 p53_inducible_oxidored 84.0 1.9 4.1E-05 43.7 5.6 42 462-505 139-182 (323)
400 cd05291 HicDH_like L-2-hydroxy 83.8 1.7 3.6E-05 46.3 5.3 64 465-531 2-74 (306)
401 PRK13243 glyoxylate reductase; 83.8 2 4.4E-05 46.5 6.0 97 462-570 149-272 (333)
402 cd08292 ETR_like_2 2-enoyl thi 83.7 2.3 4.9E-05 44.0 6.2 86 462-553 139-238 (324)
403 PLN02858 fructose-bisphosphate 83.4 1.7 3.6E-05 55.6 5.9 176 386-577 234-452 (1378)
404 cd01079 NAD_bind_m-THF_DH NAD 83.4 2.6 5.6E-05 42.7 6.1 86 460-553 59-156 (197)
405 PRK10669 putative cation:proto 82.9 2.6 5.7E-05 48.5 6.8 41 463-506 417-459 (558)
406 PRK14619 NAD(P)H-dependent gly 82.9 8.4 0.00018 40.9 10.2 28 464-494 5-32 (308)
407 PRK06130 3-hydroxybutyryl-CoA 82.9 1.9 4.2E-05 45.5 5.3 40 464-506 5-46 (311)
408 cd08289 MDR_yhfp_like Yhfp put 82.8 2.8 6E-05 43.5 6.4 101 450-553 129-243 (326)
409 PRK11891 aspartate carbamoyltr 82.7 5.6 0.00012 44.9 9.0 166 399-571 144-357 (429)
410 TIGR01327 PGDH D-3-phosphoglyc 82.6 2.6 5.6E-05 48.5 6.5 100 462-570 137-261 (525)
411 PRK12480 D-lactate dehydrogena 82.6 3.5 7.6E-05 44.7 7.2 94 462-569 145-265 (330)
412 TIGR01759 MalateDH-SF1 malate 82.5 1.5 3.3E-05 47.4 4.4 25 464-490 4-28 (323)
413 PLN02996 fatty acyl-CoA reduct 82.5 1.4 3.1E-05 50.0 4.4 25 462-488 10-34 (491)
414 PRK11199 tyrA bifunctional cho 82.4 1.4 3E-05 48.4 4.1 39 457-497 92-130 (374)
415 PRK07502 cyclohexadienyl dehyd 82.3 4.3 9.4E-05 42.9 7.7 86 464-557 7-104 (307)
416 cd00704 MDH Malate dehydrogena 82.3 1.5 3.2E-05 47.4 4.2 24 465-490 2-25 (323)
417 cd08243 quinone_oxidoreductase 82.1 4 8.8E-05 41.8 7.2 100 450-553 128-238 (320)
418 PRK12491 pyrroline-5-carboxyla 82.1 4.2 9E-05 42.8 7.4 84 464-558 3-103 (272)
419 PRK06300 enoyl-(acyl carrier p 82.0 2.2 4.8E-05 45.4 5.3 33 462-494 7-39 (299)
420 PRK00257 erythronate-4-phospha 81.9 4.8 0.0001 44.6 8.1 80 462-554 115-208 (381)
421 PLN00016 RNA-binding protein; 81.8 1.4 3E-05 47.9 3.8 38 460-499 49-92 (378)
422 PRK15469 ghrA bifunctional gly 81.6 1.3 2.9E-05 47.5 3.6 97 463-569 136-257 (312)
423 TIGR02437 FadB fatty oxidation 81.6 2.2 4.8E-05 50.9 5.7 42 460-504 310-353 (714)
424 PRK04284 ornithine carbamoyltr 81.4 16 0.00034 39.9 11.7 168 399-572 63-277 (332)
425 COG0604 Qor NADPH:quinone redu 81.4 3.1 6.7E-05 44.9 6.2 139 408-553 80-241 (326)
426 cd01338 MDH_choloroplast_like 81.3 1.3 2.8E-05 47.8 3.3 25 464-490 3-27 (322)
427 KOG1371 UDP-glucose 4-epimeras 81.1 3.1 6.7E-05 45.2 6.0 75 463-553 2-85 (343)
428 PRK03562 glutathione-regulated 80.8 3.2 7E-05 48.7 6.6 45 459-506 396-442 (621)
429 PRK15438 erythronate-4-phospha 80.7 5 0.00011 44.5 7.7 84 462-558 115-215 (378)
430 TIGR02441 fa_ox_alpha_mit fatt 80.6 2.5 5.4E-05 50.7 5.7 41 461-504 333-375 (737)
431 PRK09424 pntA NAD(P) transhydr 80.6 5.6 0.00012 45.8 8.3 90 462-556 164-287 (509)
432 smart00822 PKS_KR This enzymat 80.4 1.9 4E-05 39.6 3.6 33 464-498 1-36 (180)
433 PRK05442 malate dehydrogenase; 80.3 1.6 3.5E-05 47.2 3.7 26 463-490 4-29 (326)
434 cd05211 NAD_bind_Glu_Leu_Phe_V 80.0 3.8 8.3E-05 41.8 6.0 30 462-494 22-51 (217)
435 PRK07201 short chain dehydroge 79.9 4 8.7E-05 47.3 7.0 28 465-494 2-31 (657)
436 PRK11064 wecC UDP-N-acetyl-D-m 79.8 8.3 0.00018 43.0 9.1 91 463-558 3-124 (415)
437 cd08295 double_bond_reductase_ 79.7 4.5 9.9E-05 42.7 6.8 99 450-553 137-251 (338)
438 cd05292 LDH_2 A subgroup of L- 79.5 3.8 8.3E-05 43.8 6.1 63 465-531 2-73 (308)
439 PRK11880 pyrroline-5-carboxyla 79.3 3.6 7.7E-05 42.4 5.7 40 465-507 4-48 (267)
440 cd08250 Mgc45594_like Mgc45594 79.0 6.4 0.00014 41.0 7.5 87 462-554 139-238 (329)
441 PLN02256 arogenate dehydrogena 79.0 5.2 0.00011 42.9 6.9 57 435-494 5-64 (304)
442 PRK09599 6-phosphogluconate de 78.9 6.1 0.00013 41.8 7.4 102 465-576 2-125 (301)
443 PRK08192 aspartate carbamoyltr 78.8 6.8 0.00015 42.8 7.8 162 406-571 66-276 (338)
444 TIGR01179 galE UDP-glucose-4-e 78.8 2 4.3E-05 44.3 3.6 28 465-494 1-28 (328)
445 PLN02306 hydroxypyruvate reduc 78.7 4.5 9.7E-05 44.9 6.6 94 462-558 164-280 (386)
446 KOG1203 Predicted dehydrogenas 78.7 2.6 5.7E-05 47.1 4.7 62 442-505 57-121 (411)
447 KOG4169 15-hydroxyprostaglandi 78.6 3.8 8.3E-05 42.7 5.5 74 463-539 5-97 (261)
448 KOG1200 Mitochondrial/plastidi 78.5 3.5 7.7E-05 42.1 5.1 45 463-509 14-60 (256)
449 PLN02206 UDP-glucuronate decar 78.4 2.3 5.1E-05 47.7 4.3 30 463-494 119-148 (442)
450 PRK00856 pyrB aspartate carbam 78.3 18 0.00038 39.0 10.7 156 399-573 63-266 (305)
451 KOG2380 Prephenate dehydrogena 78.3 1.7 3.8E-05 47.4 3.0 144 428-577 14-174 (480)
452 COG0039 Mdh Malate/lactate deh 78.2 2.5 5.4E-05 45.7 4.2 25 464-491 1-25 (313)
453 PTZ00142 6-phosphogluconate de 78.2 3 6.4E-05 47.5 5.1 106 464-573 2-129 (470)
454 cd05282 ETR_like 2-enoyl thioe 78.1 5 0.00011 41.4 6.3 86 462-553 138-237 (323)
455 PLN02350 phosphogluconate dehy 77.8 2.4 5.3E-05 48.5 4.3 110 462-576 5-138 (493)
456 PRK14106 murD UDP-N-acetylmura 77.6 5.3 0.00011 44.3 6.8 29 463-494 5-33 (450)
457 PRK11730 fadB multifunctional 77.6 3.7 8.1E-05 49.0 5.9 38 462-502 312-351 (715)
458 PRK06436 glycerate dehydrogena 77.6 4.3 9.4E-05 43.5 5.9 80 462-554 121-210 (303)
459 PRK11908 NAD-dependent epimera 77.5 3 6.6E-05 44.3 4.7 36 464-501 2-40 (347)
460 PLN02166 dTDP-glucose 4,6-dehy 77.4 2.7 6E-05 47.1 4.5 31 462-494 119-149 (436)
461 TIGR01757 Malate-DH_plant mala 77.3 2.3 4.9E-05 47.3 3.7 65 464-531 45-126 (387)
462 PLN02602 lactate dehydrogenase 77.3 2.2 4.8E-05 46.7 3.6 64 464-531 38-111 (350)
463 PLN02572 UDP-sulfoquinovose sy 77.1 2.4 5.3E-05 47.5 4.0 30 463-494 47-76 (442)
464 KOG1210 Predicted 3-ketosphing 77.0 3.3 7.1E-05 44.8 4.6 63 450-514 20-84 (331)
465 cd05294 LDH-like_MDH_nadp A la 77.0 2.9 6.2E-05 44.8 4.3 28 465-494 2-31 (309)
466 PRK14805 ornithine carbamoyltr 77.0 12 0.00026 40.3 8.9 163 406-572 60-264 (302)
467 cd08259 Zn_ADH5 Alcohol dehydr 76.8 6.3 0.00014 40.7 6.7 42 462-505 162-205 (332)
468 PLN02342 ornithine carbamoyltr 76.7 23 0.00051 38.9 11.2 162 406-572 107-310 (348)
469 cd05280 MDR_yhdh_yhfp Yhdh and 76.7 6 0.00013 40.8 6.5 44 462-508 146-191 (325)
470 PRK15409 bifunctional glyoxyla 76.6 5 0.00011 43.4 6.0 98 462-569 144-267 (323)
471 TIGR01692 HIBADH 3-hydroxyisob 76.5 2.9 6.3E-05 43.9 4.1 92 476-575 6-120 (288)
472 COG1484 DnaC DNA replication p 76.4 5.6 0.00012 41.5 6.2 86 442-534 81-176 (254)
473 COG1250 FadB 3-hydroxyacyl-CoA 76.3 1.6 3.5E-05 47.0 2.1 37 463-502 3-41 (307)
474 cd08293 PTGR2 Prostaglandin re 76.2 7.1 0.00015 41.1 7.0 85 464-553 156-254 (345)
475 PRK11150 rfaD ADP-L-glycero-D- 76.1 2.4 5.2E-05 44.1 3.4 27 466-494 2-28 (308)
476 PRK13581 D-3-phosphoglycerate 76.1 5.3 0.00012 46.0 6.4 82 462-554 139-231 (526)
477 PRK06035 3-hydroxyacyl-CoA deh 76.1 3.5 7.6E-05 43.3 4.6 39 464-505 4-44 (291)
478 PRK09009 C factor cell-cell si 76.1 3 6.6E-05 41.3 3.9 28 465-494 2-31 (235)
479 cd00650 LDH_MDH_like NAD-depen 75.7 3.2 7E-05 43.0 4.2 64 466-531 1-76 (263)
480 TIGR01214 rmlD dTDP-4-dehydror 75.7 2.8 6E-05 42.9 3.7 28 465-494 1-28 (287)
481 TIGR01724 hmd_rel H2-forming N 75.5 4.8 0.0001 43.9 5.4 74 478-558 32-121 (341)
482 cd08253 zeta_crystallin Zeta-c 75.5 11 0.00023 38.4 7.9 41 463-505 145-187 (325)
483 cd00300 LDH_like L-lactate deh 75.4 2.3 5E-05 45.3 3.0 63 466-531 1-72 (300)
484 cd05195 enoyl_red enoyl reduct 75.3 9.5 0.00021 37.8 7.3 89 462-554 108-210 (293)
485 PLN02477 glutamate dehydrogena 75.0 12 0.00025 42.1 8.5 29 462-493 205-233 (410)
486 PRK08605 D-lactate dehydrogena 75.0 6.3 0.00014 42.6 6.3 81 462-554 145-237 (332)
487 PRK00094 gpsA NAD(P)H-dependen 74.6 7.1 0.00015 41.1 6.5 91 465-558 3-111 (325)
488 COG0287 TyrA Prephenate dehydr 74.6 5.3 0.00011 42.5 5.5 29 463-494 3-31 (279)
489 PRK06932 glycerate dehydrogena 74.6 4.4 9.6E-05 43.5 5.0 94 462-569 146-264 (314)
490 PRK06223 malate dehydrogenase; 74.4 6.6 0.00014 41.5 6.2 65 464-531 3-76 (307)
491 PRK06129 3-hydroxyacyl-CoA deh 74.1 4.8 0.0001 42.8 5.0 37 465-504 4-42 (308)
492 PRK08664 aspartate-semialdehyd 74.0 4.9 0.00011 43.7 5.2 29 464-494 4-33 (349)
493 cd05288 PGDH Prostaglandin deh 73.9 7.7 0.00017 40.3 6.5 88 463-555 146-246 (329)
494 cd05290 LDH_3 A subgroup of L- 73.7 5.5 0.00012 42.8 5.4 64 465-531 1-74 (307)
495 PRK08410 2-hydroxyacid dehydro 73.6 7.6 0.00016 41.7 6.5 84 462-558 144-240 (311)
496 COG1052 LdhA Lactate dehydroge 73.5 6.2 0.00014 42.8 5.8 86 463-558 146-244 (324)
497 PLN02712 arogenate dehydrogena 73.4 5.5 0.00012 47.3 5.8 103 463-576 52-173 (667)
498 TIGR01751 crot-CoA-red crotony 72.9 7.4 0.00016 42.4 6.3 41 463-505 190-232 (398)
499 PRK07680 late competence prote 72.9 6.7 0.00015 40.8 5.7 40 465-507 2-47 (273)
500 PRK06487 glycerate dehydrogena 72.8 5.9 0.00013 42.6 5.4 93 462-569 147-264 (317)
No 1
>PLN02869 fatty aldehyde decarbonylase
Probab=100.00 E-value=8.9e-200 Score=1627.71 Aligned_cols=617 Identities=72% Similarity=1.277 Sum_probs=594.1
Q ss_pred CCCCCCCCCCCCCCCCCCccEEeehHHHhhhhhhhhcCccccccccchhhHHHHHHHHHHHhHHHHHhhchhhHhcCcCC
Q 006590 1 MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIV 80 (639)
Q Consensus 1 ~~~~~~~l~~wpw~~lg~~ky~~~~P~v~~~~~~~~~~~~~~~~~~~~~il~~~llRyl~~~~wi~~~~~~~~~~k~KIq 80 (639)
||++||+||+|||++||||||++|+|+|++++|++.+++++++|+.|++|++++++|++++|+|++++|++++++|+||+
T Consensus 1 ma~~pg~lt~wpW~~lG~~Ky~~~~p~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~l~~q~W~s~sr~~~~~~~~ri~ 80 (620)
T PLN02869 1 MASKPGILTDWPWKPLGSFKYVVLAPWVIHSIYSFVVKDEKERDLSYFLIFPFLLWRMLHNQLWISLSRYRTAKGNNRIV 80 (620)
T ss_pred CCCCCcccccCcccccCCeeeeeehHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhceeee
Confidence 99999999999999999999999999999999999988777777779999999999999999999999999999999999
Q ss_pred CCCCcccchhhhhcchhhHHHHHHHHHHHHhhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhcccc
Q 006590 81 DKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYH 160 (639)
Q Consensus 81 ~~~~~~~qvdrE~~~~n~iil~~li~~~~~~~~p~~~~~lP~w~~~gli~~lll~~lv~Df~~Yw~HRllH~~~Ly~r~H 160 (639)
+++++|+|+|||++||||+|+++++++++++.+| ..+.+|.|+..|++..+++|+++.|++|||+||++|++++||++|
T Consensus 81 ~~~i~f~QvDre~~wDd~iil~~l~~~~~~~~~p-~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~H 159 (620)
T PLN02869 81 DKGIEFEQVDRERNWDDQILFNGILFYVGYMILP-GASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYH 159 (620)
T ss_pred ccCCCceeeccccccchHHHHHHHHHHHHHHhhh-hhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 9999999999999999999999999999999999 789999999999999999999999999999999999999999999
Q ss_pred ccccccccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhccCCceecccccccccCCcc
Q 006590 161 SHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 240 (639)
Q Consensus 161 kvHH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~ 240 (639)
++||++.+|+|+++..+++.|++.+.+++.+|+++..+++..|+.++++|+++.+++++++|||+|++|+++++.+|+++
T Consensus 160 kvHHss~~~~P~Ts~~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLk 239 (620)
T PLN02869 160 SHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLK 239 (620)
T ss_pred hhccCCCCCCchhhhcCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcch
Confidence 99999999999998754445778777778899988777777789999999999999999999999999999988889999
Q ss_pred cccCCchhhhhhhcCCCCCcCCCchhhhhhcCCCCCCCchHHHHHhhcCCccccccCCCCceeeecccCCccccccccch
Q 006590 241 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIG 320 (639)
Q Consensus 241 ~li~tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~~~~~~~~~~~~~~~~~~~~~~~pd~v~l~h~~~~~s~~h~~~~ 320 (639)
|+++||++|++||+++++|||++|++||++|||+++++|+++|+... +.++ +||||||||+||++|+||+|||
T Consensus 240 yll~TPsfHdlHHs~fd~NYGlfF~~WDrLFGT~d~~s~~l~e~~~~--~~~~-----~pd~V~l~H~t~~~s~~h~~~~ 312 (620)
T PLN02869 240 YLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLK--RPEE-----IPDVVHLTHLTTPDSIYHLRLG 312 (620)
T ss_pred heecCchHHhHHhccCCcCcccchHHHHhccCCCCCCchhHHHHhhc--Cccc-----CCCEEEEeccCCHHHhhccchH
Confidence 99999999999999999999999999999999999999999999887 4344 9999999999999999999999
Q ss_pred hhhhccCCccccccCcchhhcchhhHHHHHHHHHHHHhcceEEEeecccCcccceeEEeeccCcccccchhhHHHHHHHH
Q 006590 321 FASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIE 400 (639)
Q Consensus 321 ~~~~~s~p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~I~ 400 (639)
|||+||+||+ ++||||||||+|+++|+++ |+|||||++|+|+|||+++|||+||||||||++|+++|+||++||
T Consensus 313 ~~s~as~p~~-----~~~~l~~~wp~~~~~m~~~-w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie 386 (620)
T PLN02869 313 FASLASKPYI-----SKWYLRLMWPVTSWSMMLT-WIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIE 386 (620)
T ss_pred HHHhccCCcc-----chhHHHHHHHHHHHHHHHH-HHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHH
Confidence 9999999999 9999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHH
Q 006590 401 EAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 480 (639)
Q Consensus 401 ~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~a 480 (639)
+||++|||+||||+|||+|||+|+|||+|++||+|||+ ||||||||||||||||+|+||++++|||++|||+ |||||
T Consensus 387 ~ail~ad~~Gvkv~sLg~LNk~~~LN~~G~l~v~k~p~-L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~s--K~~ra 463 (620)
T PLN02869 387 EAILEADKRGVKVLSLGLLNQGEELNRYGELYIHRNPK-LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS--KVAYF 463 (620)
T ss_pred HHHHHHHhcCCEEEechhcchhhhhcCCceEeeecCCC-cceEEEeCCchHHHHHHHhcCCCCceEEEecCcc--HHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999996 99999
Q ss_pred HHHHHhccCcEEEecchhhHHHHHhhCcc-ccccceeeeccccccceeEEEEcCcCChhhhhcCCCCceeecccccCCcC
Q 006590 481 VASSLCQMGIKVATICKDDYEKLKLRIPV-EAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRK 559 (639)
Q Consensus 481 va~~L~~~~~~v~~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~~ 559 (639)
||.+||||||||++.++|||++||+|++. ++|+||+++|++ +||+|||||+++++||++|||||+||||||+|+++
T Consensus 464 ia~~lc~r~i~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~k~w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~ 540 (620)
T PLN02869 464 IASALCQRGIQVATFREDEYEKLNKKLPNTECGSKLLLSKNY---SEKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPKR 540 (620)
T ss_pred HHHHHHhcCCeEeecCHHHHHHHHHhccchhhhhhEEEeecc---CceeEEecCCCCHHHHhhCCCCCeecccccCCchh
Confidence 99999999999666899999999999888 899999999998 99999999999999999999999999999999999
Q ss_pred CCCCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchh-hhhHHHHHHHHHhcCCccCCCC
Q 006590 560 LRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQT-MCDIHQVWHASLRHGFRPLFPV 638 (639)
Q Consensus 560 ~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~~e~G~i-v~~i~~i~~aa~kHGF~p~~~~ 638 (639)
.||||+|+++|||++|+++||++|||||||||+|+||||||||||||||++|||| + |++||++|+||+||||+|+...
T Consensus 541 ~R~dC~Y~~~pam~~p~~~~~~~sce~~l~r~v~~a~~~~givh~legw~~he~g-~~v~~id~~W~aal~hgf~p~~~~ 619 (620)
T PLN02869 541 LRKDCFYHTTPAMMSPKSFENVDSCENWLPRRAMSAWRVAGILHALEGWNVHECG-YTMFDIEKIWEASLQHGFRPLLIP 619 (620)
T ss_pred hhccccccCCccccCChhhcccchhhccccchhhhHhhhcceeeeecCccccccc-cccccHHHHHHHHHHcCCccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999 8 9999999999999999998754
No 2
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=100.00 E-value=4.5e-67 Score=493.38 Aligned_cols=164 Identities=61% Similarity=1.106 Sum_probs=160.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccccceeEEEEcCcCChhhhhcCCC
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPK 545 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~a~~ 545 (639)
|||+|+++ |||||||.+|||||+||+|.++|+|++||++++.++++||++++++ ++|+|||||+||++||++|||
T Consensus 1 V~L~G~~s--KvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~~~~~~~~Lv~~~~~---~~K~WlVGd~l~~~EQ~~Ap~ 75 (164)
T PF12076_consen 1 VFLTGNTS--KVARAIALALCRRGVQVVMLSKERYESLKSEAPEECQSNLVQSTSY---QAKTWLVGDGLTEEEQKWAPK 75 (164)
T ss_pred Ceeccccc--HHHHHHHHHHHhcCCEEEEecHHHHHHHHHHcCHHhhccEEeecCC---CceeEEeCCCCCHHHHhcCCC
Confidence 79999995 9999999999999999999999999999999999999999999998 679999999999999999999
Q ss_pred CceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchhhhhHHHHHH
Q 006590 546 GTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWH 625 (639)
Q Consensus 546 G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~~e~G~iv~~i~~i~~ 625 (639)
||+|||||||||+++||||+|++||||++|++++|+||||||||||+||||||||||||||||++||||.-|++||++|+
T Consensus 76 Gt~FipfsqfP~~~~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG~~v~~idkvW~ 155 (164)
T PF12076_consen 76 GTHFIPFSQFPPKKVRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECGDDVDRIDKVWE 155 (164)
T ss_pred CCEEeeccCCCcHHHhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccCcccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999943999999999
Q ss_pred HHHhcCCcc
Q 006590 626 ASLRHGFRP 634 (639)
Q Consensus 626 aa~kHGF~p 634 (639)
||++|||+|
T Consensus 156 AAl~HGF~P 164 (164)
T PF12076_consen 156 AALKHGFRP 164 (164)
T ss_pred HHHHcCCCC
Confidence 999999998
No 3
>PRK14982 acyl-ACP reductase; Provisional
Probab=100.00 E-value=1.6e-36 Score=322.23 Aligned_cols=263 Identities=15% Similarity=0.195 Sum_probs=205.0
Q ss_pred HhcceEEEeecccCcc---cceeEEe--eccCcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCce
Q 006590 357 IYGRTFVSESNTLDKL---KLQTWVV--PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI 431 (639)
Q Consensus 357 ~~~~~f~~~~~~~~~~---~~~~w~~--pr~~~~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~ 431 (639)
....+|++++-.++-- ..+-|.| |-.+=|- ...+.|.+.++|++|+..|+|.|++|++||++++ +.+++ .
T Consensus 35 ~~~~p~~~~~~~v~S~~g~~~eg~~i~~~~~pe~l-~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~ts---iv~~~-~ 109 (340)
T PRK14982 35 CSAPPQLVDHIEVTSATGQTIEGKYIESCFLPEML-SNRRFKTARRKVLNAMALAQKKGINITALGGFSS---IIFEN-F 109 (340)
T ss_pred hhCCCeEeeeEEEEeCCCCEEEEEEEeCCCCHHHH-hccChHHHHHHHHHHHHHHHHCCCeEEEcCChHH---HhcCC-c
Confidence 3346899998888544 4477876 3333233 4445666667799999999999999999999999 66555 3
Q ss_pred eeecCCC--Ccce---eeecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhc-cCc-EEEe-
Q 006590 432 YLERQPN--KLKI---KVVDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQ-MGI-KVAT- 494 (639)
Q Consensus 432 ~~~k~p~--~L~i---rvv~Gnsltaavv~~~ip~---------~~~~V~~~Gatg~~kig~ava~~L~~-~~~-~v~~- 494 (639)
.+.++.+ .++| +|||||||||++.++++.. ..++|+|+||+| +||+.+|+.|++ .|+ ++++
T Consensus 110 ~~~~~~~~r~i~ie~~~~TtGNs~T~~ll~~~V~la~~~lg~~l~~k~VLVtGAtG--~IGs~lar~L~~~~gv~~lilv 187 (340)
T PRK14982 110 NLLQHKQVRNTTLEWERFTTGNTHTAYVICRQVEQNAPRLGIDLSKATVAVVGATG--DIGSAVCRWLDAKTGVAELLLV 187 (340)
T ss_pred ccccccccccceeccccccCCchhHHHHHHHHHHHhHHHhccCcCCCEEEEEccCh--HHHHHHHHHHHhhCCCCEEEEE
Confidence 3332211 1555 8999999999999998865 368999999999 999999999985 454 6666
Q ss_pred -cchhhHHHHHhhCccccccceeeeccccc--cceeE--EEEcC----cCChhhhhcCCCCceeecccccCCc----CCC
Q 006590 495 -ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKI--WLVGD----DLTGKEQARAPKGTIFIPYTQIPPR----KLR 561 (639)
Q Consensus 495 -~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~v--wivg~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R 561 (639)
|++++++.+++++..+. +.++.+ +.+++ ++.+. .+++++. ++|.++||.+ +|+. .-|
T Consensus 188 ~R~~~rl~~La~el~~~~------i~~l~~~l~~aDiVv~~ts~~~~~~I~~~~l---~~~~~viDiA-vPRDVd~~v~~ 257 (340)
T PRK14982 188 ARQQERLQELQAELGGGK------ILSLEEALPEADIVVWVASMPKGVEIDPETL---KKPCLMIDGG-YPKNLDTKVQG 257 (340)
T ss_pred cCCHHHHHHHHHHhcccc------HHhHHHHHccCCEEEECCcCCcCCcCCHHHh---CCCeEEEEec-CCCCCCcccCC
Confidence 88899999988865332 223332 44444 44443 4888877 7999999999 5555 335
Q ss_pred CCceeecCCccccCCCCc-cc-cccccccCcchhHHHHHhhhhhhhcCCCCC-ccch--h-hhhHHHHHHHHHhcCCccC
Q 006590 562 KDCFYHSTPAMIIPPSLS-NM-HSCENWLGRRVMSAWRIAGIIHALEGWDLN-ECGQ--T-MCDIHQVWHASLRHGFRPL 635 (639)
Q Consensus 562 ~dc~y~~~~a~~~P~~~~-~~-~~~e~~~p~~~~~Ac~a~~~v~alEgw~~~-e~G~--i-v~~i~~i~~aa~kHGF~p~ 635 (639)
+|+.+.+++.+++|.+++ ++ ...|+++|+|+++||+||+||++||||++| ++|| | +++|++|.++|+||||+|+
T Consensus 258 ~~V~v~~gG~V~~p~~vd~~l~~~v~~~~~~r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~ 337 (340)
T PRK14982 258 PGIHVLKGGIVEHSLDIDWKIMEIAEMDNPQRQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPL 337 (340)
T ss_pred CCEEEEeCCccccCCCcCccHHHHHhccchhhHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCccc
Confidence 999999999999999987 43 346789999999999999999999999999 5997 8 9999999999999999996
Q ss_pred C
Q 006590 636 F 636 (639)
Q Consensus 636 ~ 636 (639)
-
T Consensus 338 ~ 338 (340)
T PRK14982 338 L 338 (340)
T ss_pred c
Confidence 4
No 4
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=307.40 Aligned_cols=234 Identities=20% Similarity=0.223 Sum_probs=191.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCc-eeeecCCCCcc-eeeecCChhHHHHHHhcCcC----
Q 006590 388 LPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGE-IYLERQPNKLK-IKVVDGSSLAAAVVVNSLPK---- 461 (639)
Q Consensus 388 ~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~-~~~~k~p~~L~-irvv~Gnsltaavv~~~ip~---- 461 (639)
+-++.|++.|.+.+|++.|+|.|++|++||+|++ +.++-+ ....|+|+ +. +|+|||||+||+++|.++.+
T Consensus 85 ~~s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e-~t~~~~ttgns~Tayaa~r~Vl~~~~~ 160 (351)
T COG5322 85 LRSRPKAATRRVLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVE-LTFTRFTTGNSHTAYAACRQVLKHFAQ 160 (351)
T ss_pred HhhCHHHHHHHHHHHHHHHHHcCCeEEeecchhh---hhccccccccccceE-EEEEecccCCccchHHHHHHHHHHHHH
Confidence 3456889999999999999999999999999999 666433 45569999 98 99999999999999999977
Q ss_pred -----CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe------cchhhHHHHHhhCccccccceeeeccccc--ccee
Q 006590 462 -----TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT------ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTK 527 (639)
Q Consensus 462 -----~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~------~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~ 527 (639)
..++|.+||||| +||++||++|+ +-+++.++ +++++++.||+++..+. +-+++++. ++..
T Consensus 161 lGidlsqatvaivGa~G--~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~----i~s~d~~~~~e~i~ 234 (351)
T COG5322 161 LGIDLSQATVAIVGATG--DIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGK----IMSLDYALPQEDIL 234 (351)
T ss_pred hCcCHHHCeEEEecCCc--hHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCe----eeeccccccccceE
Confidence 488999999999 99999999999 77777777 66777888888877776 22334443 5557
Q ss_pred EEEE----cCcCChhhhhcCCCCceeecccc---cCCc-CCCCCceeecCCccccCCC--CccccccccccCcchhHHHH
Q 006590 528 IWLV----GDDLTGKEQARAPKGTIFIPYTQ---IPPR-KLRKDCFYHSTPAMIIPPS--LSNMHSCENWLGRRVMSAWR 597 (639)
Q Consensus 528 vwiv----g~~~~~~~q~~a~~G~~f~~~~~---~~~~-~~R~dc~y~~~~a~~~P~~--~~~~~~~e~~~p~~~~~Ac~ 597 (639)
+|++ |-.|.|+.+ +||...+|=.. +++. +-|.|+..++++.+.-|.+ |..+...+| |.|+++||.
T Consensus 235 v~vAs~~~g~~I~pq~l---kpg~~ivD~g~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~~~~~--p~~~l~aCl 309 (351)
T COG5322 235 VWVASMPKGVEIFPQHL---KPGCLIVDGGYPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMKIVGM--PVRQLFACL 309 (351)
T ss_pred EEEeecCCCceechhhc---cCCeEEEcCCcCcccccccccCCCeEEecCccccCccccchhHHHHccc--chhhHHHHH
Confidence 7984 556677666 78887777662 3333 4456778888888877776 565554444 999999999
Q ss_pred HhhhhhhhcCCCCC-ccch-h-hhhHHHHHHHHHhcCCccCC
Q 006590 598 IAGIIHALEGWDLN-ECGQ-T-MCDIHQVWHASLRHGFRPLF 636 (639)
Q Consensus 598 a~~~v~alEgw~~~-e~G~-i-v~~i~~i~~aa~kHGF~p~~ 636 (639)
||++|+++|||++| +||| | +|||++|.++|.||||+|+.
T Consensus 310 AEtlil~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~~ 351 (351)
T COG5322 310 AETLILEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPLD 351 (351)
T ss_pred HHHHHHHhcchhhhccccccccHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999 5999 8 99999999999999999964
No 5
>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]
Probab=100.00 E-value=3.9e-33 Score=284.96 Aligned_cols=225 Identities=19% Similarity=0.240 Sum_probs=176.4
Q ss_pred hHHHHHHHHHHHhHHHHHh--hchhhHhcCcCCCCCCcccchhhhhcc-----hhhHHHHHHHHHHHHhhcC-C---CCC
Q 006590 50 IFPFLLLRMLHDQIWISLS--RYRTAKRNNRIVDKAIEFDQVDRERNW-----DDQIVFNGLIFYIVRMLIP-P---SYS 118 (639)
Q Consensus 50 il~~~llRyl~~~~wi~~~--~~~~~~~k~KIq~~~~~~~qvdrE~~~-----~n~iil~~li~~~~~~~~p-~---~~~ 118 (639)
++...+.-++.+..|+.++ +.+++++|||||+++.+ ..++.+++ .||++++.++..+.+...+ . ...
T Consensus 35 ~~~~~~~y~l~~lpf~~iD~t~~~~~~~rYKIQp~k~~--s~~~~~kc~k~vl~n~~~v~~p~~~~~y~~~~~~~~~~~~ 112 (283)
T KOG0873|consen 35 FIVHELVYWLFCLPFIFIDVTNRPPFLRRYKIQPKKNP--SLSKQLKCLKVVLLNHFLVVLPLTLVSYPFVEWFGLPSGA 112 (283)
T ss_pred HHHHHHHHHHhcchheEeecccCcchhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHhHHHHHHhCCCcCC
Confidence 4555555555566666544 46889999999998764 34444444 3777777777666654432 1 223
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccccccccccccCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 006590 119 NLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMV 198 (639)
Q Consensus 119 ~lP~w~~~gli~~lll~~lv~Df~~Yw~HRllH~~~Ly~r~HkvHH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~l 198 (639)
.+|.|.+ ++.+++++++++|+.|||.||++|++++||.+||+||++++|.+.+|.|+||+|+++.++ .|+.++.+
T Consensus 113 plPt~~~--~l~~l~i~~liEd~~fY~~HRL~H~~~~Yk~iHKvHHe~taPf~~sa~YaHp~E~~~lg~---~~~~~p~~ 187 (283)
T KOG0873|consen 113 PLPSWKE--MLAQLVVFFLIEDIGFYWSHRLFHHKWLYKYIHKVHHEYTAPFGLSAEYAHPLEHLFLGL---GTVMGPAL 187 (283)
T ss_pred CCCcHHH--HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhhhhcccCchhHhhhhcCHHHHHHcCC---hhhhhhHH
Confidence 4667665 999999999999999999999999999999999999999999999999999999998875 23333333
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcCCCCCcCCCchhhhhhcCCCCCCC
Q 006590 199 LKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSS 278 (639)
Q Consensus 199 lg~~s~~~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~~ 278 (639)
++ +|+.+.++|+++..+.++..||||++ |+.+.+.+|+. .+.++||+||..+.+||+..|+.||||+||....+
T Consensus 188 ~~-~H~~t~wiw~~l~i~~t~~~HsGY~f-Pwsl~~~~pfy----~ga~~HD~HH~~f~~n~~~~f~~~D~i~GTd~~~~ 261 (283)
T KOG0873|consen 188 LC-GHVITLWIWIALRILETVESHSGYDF-PWSLSKLIPFY----GGAEHHDYHHLVFIGNFASVFGYLDRIHGTDSTYR 261 (283)
T ss_pred hh-hHHHHHHHHHHHHHHHHhhccCCCCC-CccccccCccc----CCCcccchhhhhccccccchhHHHHHHhccCccHh
Confidence 33 39999999999999999999999997 99988888863 58999999999999999999999999999976543
Q ss_pred --chHHHHHhh
Q 006590 279 --DSVYEKSLK 287 (639)
Q Consensus 279 --~~~~~~~~~ 287 (639)
.+..|++.+
T Consensus 262 ~~k~~~~~~~~ 272 (283)
T KOG0873|consen 262 ALKELKEAIKK 272 (283)
T ss_pred hhhhHHHHHHH
Confidence 333444443
No 6
>COG3000 ERG3 Sterol desaturase [Lipid metabolism]
Probab=99.94 E-value=1.2e-26 Score=240.41 Aligned_cols=152 Identities=27% Similarity=0.436 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhhhccccccccccccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 006590 127 GVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIAS 206 (639)
Q Consensus 127 gli~~lll~~lv~Df~~Yw~HRllH~~~Ly~r~HkvHH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~~ 206 (639)
.+++++++.+++.|+.+||.||++|+.++||++|++||++.+|+++++.+.||+|.++......+|+.++ + .+..+
T Consensus 94 ~~~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l~---~-~~~~~ 169 (271)
T COG3000 94 PFALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLLL---G-LSPVA 169 (271)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCcccCCchhhhhcChHHHHHHHHHHHHHHHHh---c-CCHHH
Confidence 3577888888899999999999999999999999999999999999999999999999877655666543 3 57777
Q ss_pred HHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcCC--CCCcCCCchhhhhhcCCCCCCCchHHHH
Q 006590 207 FVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQF--RTNYSLFMPIYDYIYGTIDRSSDSVYEK 284 (639)
Q Consensus 207 ~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~~--~~NYG~~f~~WDrLFGT~~~~~~~~~~~ 284 (639)
+..+.++..+.+.++|||++. | .. .+++++++.+|++|++||+++ ++|||.++++|||+|||+.++.++.+++
T Consensus 170 ~~~~~~~~~~~~~~~H~~~~~-~-~~---~~~~~~v~~~p~~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~ 244 (271)
T COG3000 170 VALLFIFLLFWAVLIHSNLDL-P-LP---LGWLRYVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDK 244 (271)
T ss_pred HHHHHHHHHHHHHHHhcCccc-c-CC---cccceeeecCchHHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCccc
Confidence 777888889999999999996 4 22 345666789999999999997 4999999999999999999998887777
Q ss_pred Hhh
Q 006590 285 SLK 287 (639)
Q Consensus 285 ~~~ 287 (639)
+..
T Consensus 245 ~~~ 247 (271)
T COG3000 245 IGV 247 (271)
T ss_pred ccc
Confidence 665
No 7
>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]
Probab=99.90 E-value=6.9e-24 Score=214.55 Aligned_cols=144 Identities=21% Similarity=0.365 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccccccccccccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 006590 126 DGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIA 205 (639)
Q Consensus 126 ~gli~~lll~~lv~Df~~Yw~HRllH~~~Ly~r~HkvHH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~ 205 (639)
...++.+.+++++.||.+||.||.+|++.+||+.|+.||.+..++|+++.++||++.++.. +|-.+..+..+.|..
T Consensus 126 ~~~~~~i~~flfF~Df~iYw~HR~lH~~~vy~~LH~~HH~~~~~tpfAslafhpidg~lqa----ip~~I~~Fi~Plh~~ 201 (312)
T KOG0872|consen 126 FLLFVSIFLFLFFTDFGIYWAHRELHHRGVYKRLHKPHHIWNICTPFASLAFHPIDGFLQA----IPYHIYPFIFPLHKV 201 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhcchhhhhhccCchhhhhcCcchhHhhh----chhHheeeeecchHH
Confidence 4467778888889999999999999999999999999999999999999999999998876 344444333445666
Q ss_pred HHHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcCCCCCcCCCchhhhhhcCCCCCCCchHHH
Q 006590 206 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYE 283 (639)
Q Consensus 206 ~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~~~~~~~ 283 (639)
+.++...+..+++++.|.|.-. -+.+.++||.+|..||..++.|||.++.+|||+|||++.+.++.++
T Consensus 202 t~L~l~~f~~iwt~~IHd~~~~----------~l~~~ingaahHtvHH~~f~~NYG~~tilwDrmfgSfr~p~~~~~d 269 (312)
T KOG0872|consen 202 TYLSLFTFVNIWTISIHDGIYG----------SLNPPINGAAHHTVHHTYFDYNYGQYTILWDRMFGSFRAPDHEDFD 269 (312)
T ss_pred HHHHHHHHHHhHheeeeccccc----------cccCccccccccceeeeeEecCCCcEEEeHHhccCcccCccccccc
Confidence 6666666778899999998643 1334578999999999999999999999999999999998877665
No 8
>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]
Probab=99.83 E-value=1.2e-21 Score=192.93 Aligned_cols=147 Identities=20% Similarity=0.360 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-hhhhhccccccccccccCChhhhhhhhhHHHHHHHHH-HHHHHHHHHHhhhhhHH
Q 006590 128 VILTILVHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL-FAIPLVTTMVLKNASIA 205 (639)
Q Consensus 128 li~~lll~~lv~Df~~Yw~HRllH-~~~Ly~r~HkvHH~s~~p~~~ta~~~hplE~ll~~~l-~~iPll~~~llg~~s~~ 205 (639)
...+++..+++.|.|.|++||.|| .+.||+.+|++||+-.+|.+..|.+.||+|.++...+ -++..+ +.| .|+-
T Consensus 122 ~A~q~f~aflviDtWQYF~HRymH~NK~LYk~iHs~HHrL~VPYayGALyNhP~EGllLDT~G~gla~l---~sg-lspr 197 (287)
T KOG0874|consen 122 LARQFFAAFLVIDTWQYFLHRYMHMNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGGLAFL---LSG-LSPR 197 (287)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhceeEecchhhhhhhcCcchhhhhhhhchHHHHH---HcC-CCcc
Confidence 356677888899999999999999 6889999999999999999999999999999987542 112211 122 3444
Q ss_pred HHHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcC--CCCCcCC-CchhhhhhcCCCCCCCchHH
Q 006590 206 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYSL-FMPIYDYIYGTIDRSSDSVY 282 (639)
Q Consensus 206 ~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~--~~~NYG~-~f~~WDrLFGT~~~~~~~~~ 282 (639)
+..++..+..+-++.+||||-+ |..+++.+ +-+.+.+||+||.. ...||+. +|++||+++||+.+.+.|..
T Consensus 198 ~aiifFtfaTiKTVDDHCGy~l-P~dpfqm~-----F~NNa~YHDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~E~~ 271 (287)
T KOG0874|consen 198 TAIIFFTFATIKTVDDHCGYWL-PGDPFQMF-----FPNNAAYHDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSLEKR 271 (287)
T ss_pred ceEEEEEeeeeeeecccccccc-CCCceeEe-----ccCCchhhhhhhhhhccccccCCcHHHHHHHHHhhcCCchhccc
Confidence 4334445556778899999976 88777652 22579999999998 6799985 89999999999998875544
Q ss_pred HH
Q 006590 283 EK 284 (639)
Q Consensus 283 ~~ 284 (639)
.+
T Consensus 272 ~e 273 (287)
T KOG0874|consen 272 LE 273 (287)
T ss_pred cc
Confidence 33
No 9
>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.69 E-value=4.3e-17 Score=145.49 Aligned_cols=111 Identities=29% Similarity=0.480 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHhhc-hhhhhccccccccccccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 006590 134 VHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYII 212 (639)
Q Consensus 134 l~~lv~Df~~Yw~HRllH-~~~Ly~r~HkvHH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~~~~~y~i 212 (639)
+.+++.|+++||+||++| .+++| ++|+.||++++|+++++.+.+|+|.++..++ ++++..+++..+..++.++.+
T Consensus 3 ~~~l~~d~~~Y~~HRl~H~~~~l~-~~H~~HH~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 78 (114)
T PF04116_consen 3 LGFLLWDFWEYWMHRLLHKIPFLW-RIHKVHHSPKNPTPLSAFRFHPLEALLLALL---PLLLPLLLLPFHALAFLLGIA 78 (114)
T ss_pred eeHHHHHHHHHHHHHHHhcCchHH-HHHHHHhCCcccCchHHHHcChHHHHHHHHH---HHHHHHHHHhHhHHHHHHHHH
Confidence 446678999999999999 66666 9999999999999999999999999987653 333333344567777778888
Q ss_pred HHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhc
Q 006590 213 YVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHT 254 (639)
Q Consensus 213 ~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~ 254 (639)
+..+.+.++|||+.. + ..+..+++..+|++|+.||+
T Consensus 79 ~~~~~~~~~H~~~~~-~-----~~~~~~~~~~~~~~H~~HH~ 114 (114)
T PF04116_consen 79 LFYLWYIFIHSGYHH-R-----FPPRLRYLFVTPRHHDLHHS 114 (114)
T ss_pred HHHHHHHHhhcCccC-C-----CCCcchhHhcCHHHHHhhCc
Confidence 888999999999921 1 12456777889999999995
No 10
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.31 E-value=9.6e-12 Score=122.29 Aligned_cols=166 Identities=15% Similarity=0.093 Sum_probs=117.1
Q ss_pred ecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccc
Q 006590 445 VDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH 513 (639)
Q Consensus 445 v~Gnsltaavv~~~ip~---------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~ 513 (639)
|+||++|||++++.+.+ ..++|+++|++| .+|+++++.|+++|.+|.+ |+.++.+++.+++....+.
T Consensus 1 ~~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG--~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~ 78 (194)
T cd01078 1 SNGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE 78 (194)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 68999999999988875 346999999999 9999999999999999988 8889998888776433222
Q ss_pred ceee--ecc---ccc--cceeEEE----EcCcCChhhhhcCC-CCceeecccccCCc-----CCCCCceeecCCccccCC
Q 006590 514 NLVL--STS---YAA--HKTKIWL----VGDDLTGKEQARAP-KGTIFIPYTQIPPR-----KLRKDCFYHSTPAMIIPP 576 (639)
Q Consensus 514 ~l~~--~~~---~~~--~~~~vwi----vg~~~~~~~q~~a~-~G~~f~~~~~~~~~-----~~R~dc~y~~~~a~~~P~ 576 (639)
.+.. ..+ +++ +.++++| .|.. .+.+..+++ +|.+++|+...|+. +.|+|.++.+++...-|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~diVi~at~~g~~-~~~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g~~~~g~- 156 (194)
T cd01078 79 GVGAVETSDDAARAAAIKGADVVFAAGAAGVE-LLEKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREGKVPYGA- 156 (194)
T ss_pred cEEEeeCCCHHHHHHHHhcCCEEEECCCCCce-echhhhcccCceeEEEEccCCCCCCcccccccCCceecCCCeEEEe-
Confidence 2221 122 222 6677776 3332 122222233 48999999954443 56899999998733212
Q ss_pred CCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchhhhhHHHHHHHHHhc
Q 006590 577 SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRH 630 (639)
Q Consensus 577 ~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~~e~G~iv~~i~~i~~aa~kH 630 (639)
...+++|+++.+||++|.|. +|++.. +.++|-+.|+||
T Consensus 157 ------~~~~g~~~~~~~~~~ae~~~--~~~~~~--------~~~~~~~~~~~~ 194 (194)
T cd01078 157 ------IGVGGLKMKTHRACIAKLFE--SNPLVL--------DAEEIYDLAKEM 194 (194)
T ss_pred ------eccchhHHHHHHHHHHHHhh--cCCeee--------chHHHHHHHhcC
Confidence 13478999999999999998 476544 356666666665
No 11
>PLN02434 fatty acid hydroxylase
Probab=99.01 E-value=6.7e-09 Score=106.20 Aligned_cols=136 Identities=20% Similarity=0.273 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-hchh-------hhhccccccccccccCChhhhhhhhhHHHHHHHHHHHHHHHHHH--
Q 006590 128 VILTILVHMGPVEFLYYWFHRA-LHHH-------YLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM-- 197 (639)
Q Consensus 128 li~~lll~~lv~Df~~Yw~HRl-lH~~-------~Ly~r~HkvHH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~-- 197 (639)
.+..+++.+++.-+.+|.+||. +|.. .+....|..||.. |....-..++|.-.++....+..++..+.
T Consensus 83 ~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~--P~D~~rLv~PP~~~~~l~~~~~~l~~~~~~~ 160 (237)
T PLN02434 83 VVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKH--PMDGLRLVFPPAATAILCVPFWNLIALFATP 160 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcC--CCCCCCeecCcHHHHHHHHHHHHHHHHHcch
Confidence 4556677788899999999996 7852 2334678899975 33333344666554433322211111100
Q ss_pred -HhhhhhHHHHHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcC-CCCCcCCCchhhhhhcCCCC
Q 006590 198 -VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID 275 (639)
Q Consensus 198 -llg~~s~~~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT~~ 275 (639)
.....-...+.+|+. .+......|.+ + |.. ++++. --++|..||.+ .+.|||...++||++|||+.
T Consensus 161 ~~a~~~~~G~l~gYl~-Yd~~Hy~lH~~-~--p~~-----~~~r~---lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT~~ 228 (237)
T PLN02434 161 ATAPALFGGGLLGYVM-YDCTHYFLHHG-Q--PST-----DVLRN---LKKYHLNHHFRDQDKGFGITSSLWDRVFGTLP 228 (237)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHhc-C--cch-----HHHHH---HHHHHHHHcCCCCCCCCCcCchHHHHhcCCCC
Confidence 000011123344544 35666777764 2 321 22332 47899999987 59999999999999999985
Q ss_pred CC
Q 006590 276 RS 277 (639)
Q Consensus 276 ~~ 277 (639)
++
T Consensus 229 ~~ 230 (237)
T PLN02434 229 PS 230 (237)
T ss_pred Cc
Confidence 54
No 12
>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]
Probab=97.74 E-value=6.4e-05 Score=75.23 Aligned_cols=137 Identities=20% Similarity=0.298 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-hchhh---hh------ccccccccccccCChhhhhhhhhHHHHHHHHHHHHHHHHHH-
Q 006590 129 ILTILVHMGPVEFLYYWFHRA-LHHHY---LY------SRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM- 197 (639)
Q Consensus 129 i~~lll~~lv~Df~~Yw~HRl-lH~~~---Ly------~r~HkvHH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~- 197 (639)
...+++.++...+.+|-.||. +|.++ =| --+|..||.-. ..-.-..++|+-..+....+..++-.+.
T Consensus 84 ~~~f~~Gvf~WTl~EY~lHRflFH~k~~~~s~~~~t~Hfl~HGcHHk~P--~D~~RLVfPP~~~~il~~pfy~~~~~vl~ 161 (240)
T KOG0539|consen 84 SGLFVIGVFTWTLIEYTLHRFLFHIKPNPDSYWLITLHFLIHGCHHKLP--MDGYRLVFPPTPFAILAAPFYLILSLVLP 161 (240)
T ss_pred hHHHHHHHHHHHHHHHHHHheEEEecCCCCchHHHHHHHHHhcccccCC--CCCceEecCCchHHHHHHHHHHHHHHhcC
Confidence 344556677889999999997 68542 11 13699999753 3333345666655544333222221110
Q ss_pred --HhhhhhHHHHHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcC-CCCCcCCCchhhhhhcCCC
Q 006590 198 --VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTI 274 (639)
Q Consensus 198 --llg~~s~~~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT~ 274 (639)
.....-...+++|+.+- .....-|-|-- |+. |.++ .--.+|.-||-+ .+..||....+||++|||.
T Consensus 162 ~~~~~a~faG~l~GYV~YD-mtHYyLHhg~p--~~~-----~~~~---~lK~yHl~HHfk~q~~GfGItS~lWD~VFgTl 230 (240)
T KOG0539|consen 162 HPVAPAGFAGGLLGYVCYD-MTHYYLHHGSP--PKR-----PYLK---HLKKYHLNHHFKHQDLGFGITSSLWDYVFGTL 230 (240)
T ss_pred cchhhhhhccchhhhhhhh-hhhhhhhcCCC--CCc-----hHHH---HHHHHHhhhhhhccccCccccHHHHHHHhccC
Confidence 00011122455676653 44444454311 221 2332 246789999987 8999999999999999998
Q ss_pred CCCC
Q 006590 275 DRSS 278 (639)
Q Consensus 275 ~~~~ 278 (639)
-...
T Consensus 231 ~~~~ 234 (240)
T KOG0539|consen 231 GPLK 234 (240)
T ss_pred CCCc
Confidence 7654
No 13
>PLN02601 beta-carotene hydroxylase
Probab=97.44 E-value=0.00099 Score=69.14 Aligned_cols=132 Identities=21% Similarity=0.304 Sum_probs=70.4
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hchhhhhccccccccccccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 006590 118 SNLRFWRSDGVILTILVHMGPVEFLYYWFHRA-LHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTT 196 (639)
Q Consensus 118 ~~lP~w~~~gli~~lll~~lv~Df~~Yw~HRl-lH~~~Ly~r~HkvHH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~ 196 (639)
.+.|.-...+.+..++..++..|++-.|.||. +|. +.|..|+-||+...- ++. ..+ ++.+++++|.+.+
T Consensus 126 g~~p~~em~~~~al~lgtfvgMEf~Aw~aHKYvMHG--~LW~lH~sHH~Pr~g-~FE--~ND-----lFaVifAvpAIaL 195 (303)
T PLN02601 126 GEVSMLEMFGTFALSVGAAVGMEFWARWAHRALWHD--SLWNMHESHHKPREG-AFE--LND-----VFAIVNAVPAIGL 195 (303)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cchhhhhhcCCCCCC-Ccc--ccc-----chhhhhHHHHHHH
Confidence 45664332233344455566789999999996 776 347899999987642 221 111 1112233344333
Q ss_pred HHhhhhh-----------HHHHHHHH-HHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcC--CCCCcCC
Q 006590 197 MVLKNAS-----------IASFVGYI-IYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYSL 262 (639)
Q Consensus 197 ~llg~~s-----------~~~~~~y~-i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~--~~~NYG~ 262 (639)
+..|..+ -..+.+|. +|+.+...+.|--+ |......-|+++. -...|.+||+. ...+||.
T Consensus 196 ~~~G~~~~g~~p~~~fgiGlGITlYGiaYffVHDgLVHqRf---p~~~~a~~~Y~rr---l~~AHklHHa~Ke~Gv~FGf 269 (303)
T PLN02601 196 LYYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRF---PVGPIANVPYLRK---VAAAHQLHHTDKFKGVPYGL 269 (303)
T ss_pred HHHhhccccccHHHHHHHHHhHHHHHHHHHHHhhhhhcccc---ccCCCCCCHHHHH---HHHHHHhhccCCcCCccceE
Confidence 3323210 01122232 34455566666433 3222222345554 47899999983 5688998
Q ss_pred Cch
Q 006590 263 FMP 265 (639)
Q Consensus 263 ~f~ 265 (639)
++.
T Consensus 270 ll~ 272 (303)
T PLN02601 270 FLG 272 (303)
T ss_pred Eec
Confidence 654
No 14
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.34 E-value=0.00043 Score=64.88 Aligned_cols=92 Identities=21% Similarity=0.241 Sum_probs=64.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEE----Ec
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VG 532 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg 532 (639)
..++|+++||. ..|+++|.+|++.|.+ +++ |+.+|.++|.++.+... -..+....+.+ .+++++| +|
T Consensus 11 ~~~~vlviGaG---g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~-~~~~~~~~~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 11 KGKRVLVIGAG---GAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVN-IEAIPLEDLEEALQEADIVINATPSG 86 (135)
T ss_dssp TTSEEEEESSS---HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCS-EEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred CCCEEEEECCH---HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccc-cceeeHHHHHHHHhhCCeEEEecCCC
Confidence 57899999995 7999999999999988 777 99999999999873222 11122223332 6678877 44
Q ss_pred -CcCChhhhhcCCCCc-eeecccccCCc
Q 006590 533 -DDLTGKEQARAPKGT-IFIPYTQIPPR 558 (639)
Q Consensus 533 -~~~~~~~q~~a~~G~-~f~~~~~~~~~ 558 (639)
..++++....+++.. +++|.+ +|+.
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla-~Pr~ 113 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLA-VPRD 113 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES--SS-S
T ss_pred CcccCHHHHHHHHhhhhceeccc-cCCC
Confidence 356677775554444 899998 6666
No 15
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.23 E-value=0.00063 Score=71.23 Aligned_cols=49 Identities=16% Similarity=0.252 Sum_probs=45.0
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 006590 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA 511 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~ 511 (639)
...+.++++||++ -||+++|+.|+++|.+|++ |++||+++|++++....
T Consensus 4 ~~~~~~lITGASs--GIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~ 54 (265)
T COG0300 4 MKGKTALITGASS--GIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT 54 (265)
T ss_pred CCCcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh
Confidence 3567899999997 9999999999999999999 99999999999987766
No 16
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.07 E-value=0.00075 Score=69.63 Aligned_cols=44 Identities=25% Similarity=0.323 Sum_probs=41.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
+-|+++||++ -||.|+|+.|++.|.+|.+ |++||+++|+++++.
T Consensus 7 kv~lITGASS--GiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~ 52 (246)
T COG4221 7 KVALITGASS--GIGEATARALAEAGAKVVLAARREERLEALADEIGA 52 (246)
T ss_pred cEEEEecCcc--hHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc
Confidence 6789999996 9999999999999999999 999999999999886
No 17
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.96 E-value=0.0021 Score=67.31 Aligned_cols=125 Identities=15% Similarity=0.121 Sum_probs=77.8
Q ss_pred eecCChhHHHHHH-hcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeee-
Q 006590 444 VVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLS- 518 (639)
Q Consensus 444 vv~Gnsltaavv~-~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~- 518 (639)
=|||-...++.-- .......++|+|+|+ | -+|++++.+|++.| .+|++ |+.++.+++++++..... +.+
T Consensus 103 NTD~~G~~~~l~~~~~~~~~~k~vlVlGa-G--g~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~---~~~~ 176 (278)
T PRK00258 103 NTDGIGFVRALEERLGVDLKGKRILILGA-G--GAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK---AELD 176 (278)
T ss_pred cccHHHHHHHHHhccCCCCCCCEEEEEcC-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc---eeec
Confidence 3677776666642 233345678999998 6 89999999999999 67888 999999999888653211 111
Q ss_pred cccc-c-cceeEEE----EcC----cCChhhhhcCCCCceeecccccCCc-C----CC-CCceeecCCcccc
Q 006590 519 TSYA-A-HKTKIWL----VGD----DLTGKEQARAPKGTIFIPYTQIPPR-K----LR-KDCFYHSTPAMII 574 (639)
Q Consensus 519 ~~~~-~-~~~~vwi----vg~----~~~~~~q~~a~~G~~f~~~~~~~~~-~----~R-~dc~y~~~~a~~~ 574 (639)
.+.. . ..++++| +|- ..++-+....++++.++|++--|.. . .| +-|.+..+-.|-+
T Consensus 177 ~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~Ml~ 248 (278)
T PRK00258 177 LELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAWAKAQGARTIDGLGMLV 248 (278)
T ss_pred ccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCcCeecCCHHHHH
Confidence 1121 2 4567777 332 1223333455778888888743322 1 12 5666666666643
No 18
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.95 E-value=0.0011 Score=70.56 Aligned_cols=47 Identities=17% Similarity=0.283 Sum_probs=42.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ 512 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~ 512 (639)
.=.+|+|||. +||++.|+-|||||.+|.+ |++||++.+++|+.+...
T Consensus 50 ~WAVVTGaTD--GIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~ 98 (312)
T KOG1014|consen 50 SWAVVTGATD--GIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK 98 (312)
T ss_pred CEEEEECCCC--cchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC
Confidence 4567889997 9999999999999999999 999999999999877664
No 19
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.91 E-value=0.0025 Score=66.33 Aligned_cols=124 Identities=17% Similarity=0.194 Sum_probs=78.6
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 006590 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA 522 (639)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 522 (639)
|||-....+.--.......+.|+++|+ | -+|+++|..|++.|.+|++ |+.++.+++.+++.... . +...++.
T Consensus 99 TD~~G~~~~l~~~~~~~~~k~vliiGa-G--g~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~--~-~~~~~~~ 172 (270)
T TIGR00507 99 TDGIGLVSDLERLIPLRPNQRVLIIGA-G--GAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG--E-IQAFSMD 172 (270)
T ss_pred CCHHHHHHHHHhcCCCccCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC--c-eEEechh
Confidence 677777666322122334678999999 6 8999999999999999888 88888888888754311 1 1111222
Q ss_pred --c-cceeEEE----Ec--CcCC--hhhhhcCCCCceeecccccCCc-----CCC-CCceeecCCcccc
Q 006590 523 --A-HKTKIWL----VG--DDLT--GKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 574 (639)
Q Consensus 523 --~-~~~~vwi----vg--~~~~--~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~ 574 (639)
+ .+++++| +| ..++ +-+....++|.+++|.+=.|++ +.| +.|.+.++-.|-+
T Consensus 173 ~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~~A~~~G~~~vdG~~Ml~ 241 (270)
T TIGR00507 173 ELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLAEAKSLGTKTIDGLGMLV 241 (270)
T ss_pred hhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeeeCCHHHHH
Confidence 1 4567777 22 1111 1112345788899999865554 223 6788887777754
No 20
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.77 E-value=0.0025 Score=70.81 Aligned_cols=151 Identities=17% Similarity=0.264 Sum_probs=95.3
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-cceeEEEE--c-
Q 006590 461 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV--G- 532 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwiv--g- 532 (639)
...++|+++|+ | .+|+.++++|...|. +|++ |+.++.+.++++++... +...+.. . ..++++|. |
T Consensus 180 ~~~~~vlViGa-G--~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~~~~~l~~aDvVI~aT~s 252 (423)
T PRK00045 180 LSGKKVLVIGA-G--EMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEA----IPLDELPEALAEADIVISSTGA 252 (423)
T ss_pred ccCCEEEEECc-h--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcE----eeHHHHHHHhccCCEEEECCCC
Confidence 35679999998 6 999999999999997 6776 88888888888865321 2222333 2 55677662 2
Q ss_pred --CcCChhhhhcC-----CCCceeecccccCCc---CCC--CCceeecCCccccCCCCccccc-cccccCcchhHHHHHh
Q 006590 533 --DDLTGKEQARA-----PKGTIFIPYTQIPPR---KLR--KDCFYHSTPAMIIPPSLSNMHS-CENWLGRRVMSAWRIA 599 (639)
Q Consensus 533 --~~~~~~~q~~a-----~~G~~f~~~~~~~~~---~~R--~dc~y~~~~a~~~P~~~~~~~~-~e~~~p~~~~~Ac~a~ 599 (639)
-.+++++...+ .++.+++|.+ +|+. ++. +++.+. +++.+.. ++.....|.-.+-.|+
T Consensus 253 ~~~~i~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~---------~vDdl~~~~~~n~~~r~~~~~~a~ 322 (423)
T PRK00045 253 PHPIIGKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLY---------DVDDLQEIVEENLAQRQEAAEKAE 322 (423)
T ss_pred CCcEEcHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEE---------EHHHHHHHHHhhHHHHHHHHHHHH
Confidence 24556655443 3568899998 6654 121 222211 1222222 3456667888889999
Q ss_pred hhhh----hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006590 600 GIIH----ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 628 (639)
Q Consensus 600 ~~v~----alEgw~~~-e~G~-i--v-~~i~~i~~aa~ 628 (639)
.||- .++.|... +... | + +++++|-+.-+
T Consensus 323 ~ii~~~~~~f~~~~~~~~~~p~I~~lr~~~~~i~~~el 360 (423)
T PRK00045 323 AIVEEEVAEFMEWLRSLEVVPTIRALREQAEEIREEEL 360 (423)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 9986 67777554 6666 4 3 66666555443
No 21
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.69 E-value=0.0052 Score=68.13 Aligned_cols=135 Identities=19% Similarity=0.146 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHhhchhhhhccccccccccccCChh---------hhhhhhhHHHHHHHHHHHHHHHHHH-HhhhhhHH--
Q 006590 138 PVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPI---------TSVIHPFAEHIVYFLLFAIPLVTTM-VLKNASIA-- 205 (639)
Q Consensus 138 v~Df~~Yw~HRllH~~~Ly~r~HkvHH~s~~p~~~---------ta~~~hplE~ll~~~l~~iPll~~~-llg~~s~~-- 205 (639)
..|..+=.+|-+.|+.....|.|..||+...++-. +..++.|.|+++..++-.+|-.+.. ........
T Consensus 18 ~~~~~~d~~h~~~h~~~~l~~~h~~hh~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (406)
T PRK07424 18 WVEIVRDSYHALAHQWNPLYRLHNWHHRVFRPDLSVVSEEIYRKAHWYNDVPEALVMLLFGTLPVLLLQQWNVPYGWLAW 97 (406)
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHhHHhhcCCcCCcccHHHHhhhhhhcCCHHHHHHHHHhhHHHHHHhhhcccccchhh
Confidence 34555555666666544445799999998877532 3458899997765443222222211 10000000
Q ss_pred HHHHHHHHHH------HHHhhcc-CCcee--cccccccccCCcccccCCchhhhhhhcCCC-CCcCCCchhhhhhcCCCC
Q 006590 206 SFVGYIIYVD------FMNNMGH-CNFEF--IPMWLFTVFPPLKFLMYTPSYHSLHHTQFR-TNYSLFMPIYDYIYGTID 275 (639)
Q Consensus 206 ~~~~y~i~~~------~~~~~~H-sg~e~--~P~~~~~~lp~L~~li~tp~~H~lHH~~~~-~NYG~~f~~WDrLFGT~~ 275 (639)
.-..|.+.+. ...+... ++-+. .|..+.+ ++-.| +..+.||-.||-..+ .-||.++++.|+..||..
T Consensus 98 ~~~~~~~~~~~~~~~r~~~~~~~~~~~d~~h~~~~~~~--~~~~~-~v~~~~h~rh~~~~~~~~~~~~~~~~d~~~~ta~ 174 (406)
T PRK07424 98 LGVLYTLTFLFGAIARGLGLPNADELTDLTHLPGPFET--LPSQW-FVNRPYHWRHHFDNQNAYYCGTFTLVDKLMGTAL 174 (406)
T ss_pred hhhHHHHHHHHHHHHHhcccccccccccccCCCCcccC--CCccC-eecCceeEEEEeccccceeeeeEEEeehhcCccc
Confidence 0011111111 1111122 11111 2332221 12234 457899999998865 778999999999999964
No 22
>PLN00203 glutamyl-tRNA reductase
Probab=96.65 E-value=0.0056 Score=69.90 Aligned_cols=210 Identities=14% Similarity=0.204 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHcCCcEEEec-ccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcC----cC---CCcEEEE
Q 006590 397 SLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSL----PK---TTAHVLL 468 (639)
Q Consensus 397 ~~I~~Ai~~A~k~G~kv~~LG-~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i----p~---~~~~V~~ 468 (639)
.+|-+|...|++.|.- | .||. |=.. .+.+.|.-. =+.++-.|..=.+.++++-. +. ..++|+|
T Consensus 201 gQVK~A~~~A~~~g~~----g~~L~~---LF~~-Ai~~~KrVR-teT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkVlV 271 (519)
T PLN00203 201 AQVKQVVKVGQGVDGF----GRNLSG---LFKH-AITAGKRVR-TETNIASGAVSVSSAAVELALMKLPESSHASARVLV 271 (519)
T ss_pred HHHHHHHHHHHHcCCc----cHHHHH---HHHH-HHHHHHHHh-hccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEEEE
Confidence 4577888888887742 2 1222 1111 234444422 22444444443333333322 32 3689999
Q ss_pred ecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-cceeEEEE----cC-cCChh
Q 006590 469 RGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GD-DLTGK 538 (639)
Q Consensus 469 ~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwiv----g~-~~~~~ 538 (639)
+|+ | ++|+++++.|+.+|. +|++ |+.++.+.++++.+. .........+.. . .+++++|. ++ .++++
T Consensus 272 IGA-G--~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~~e 347 (519)
T PLN00203 272 IGA-G--KMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYKPLDEMLACAAEADVVFTSTSSETPLFLKE 347 (519)
T ss_pred EeC-H--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEeecHhhHHHHHhcCCEEEEccCCCCCeeCHH
Confidence 999 6 999999999999896 5777 899999999988642 111101112333 2 66777662 22 57777
Q ss_pred hhhcCCC-------CceeecccccCCc-C--CC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhh---
Q 006590 539 EQARAPK-------GTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH--- 603 (639)
Q Consensus 539 ~q~~a~~-------G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~--- 603 (639)
..+.+++ ..+|+|.+ +|+. + +. +++.+.+ -+|++. .++-.+..|.-.+=.|+.||-
T Consensus 348 ~l~~~~~~~~~~~~~~~~IDLA-vPRdIdp~v~~l~~v~lyd------iDdL~~--i~~~n~~~R~~~~~~Ae~II~ee~ 418 (519)
T PLN00203 348 HVEALPPASDTVGGKRLFVDIS-VPRNVGACVSELESARVYN------VDDLKE--VVAANKEDRLRKAMEAQTIIREES 418 (519)
T ss_pred HHHHhhhcccccCCCeEEEEeC-CCCCCccccccCCCCeEEE------eccHHH--HHHHhHHHHHHHHHHHHHHHHHHH
Confidence 7777654 25899999 8876 2 21 2222111 123332 245567777777777888875
Q ss_pred -hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006590 604 -ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 628 (639)
Q Consensus 604 -alEgw~~~-e~G~-i--v-~~i~~i~~aa~ 628 (639)
.++.|... +... | + ++.+.|-+.-+
T Consensus 419 ~~F~~w~~~~~~~p~I~~lr~~~~~i~~~El 449 (519)
T PLN00203 419 KNFEAWRDSLETVPTIKKLRSYAERIRAAEL 449 (519)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 78888766 6777 5 4 66666655443
No 23
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.61 E-value=0.013 Score=62.91 Aligned_cols=140 Identities=14% Similarity=0.114 Sum_probs=88.5
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006590 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (639)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig~ 479 (639)
.|+|+++-=-=|....+-.--++.+.-+|+ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+- .+|+
T Consensus 64 ~g~K~~~~~p~n~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGaG---~~a~ 140 (325)
T PRK08618 64 LGLKIVSVVPENKKKGKPTIPGTVILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGTG---GQAK 140 (325)
T ss_pred EEEEEEeecCCCcccCCCcceEEEEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECCc---HHHH
Confidence 578887753223212222111245555554 46699999999985 3334555 5678899999998 7899
Q ss_pred HHHHHHh-ccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEEcCcCC-hh-hhhcCCCCceeec
Q 006590 480 AVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT-GK-EQARAPKGTIFIP 551 (639)
Q Consensus 480 ava~~L~-~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~-~~-~q~~a~~G~~f~~ 551 (639)
+.+.+|+ .+++ +|.+ |++++.+++.+++..+.+.......++++ +++++++....-. |. + .+.++|++++.
T Consensus 141 ~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p~i~-~~l~~G~hV~~ 219 (325)
T PRK08618 141 GQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTPVFS-EKLKKGVHINA 219 (325)
T ss_pred HHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCcchH-HhcCCCcEEEe
Confidence 9999887 4454 4444 99999999988765443333223344553 7788877433222 21 2 56799999987
Q ss_pred c
Q 006590 552 Y 552 (639)
Q Consensus 552 ~ 552 (639)
+
T Consensus 220 i 220 (325)
T PRK08618 220 V 220 (325)
T ss_pred c
Confidence 7
No 24
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.53 E-value=0.0049 Score=58.98 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=32.4
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
|+|+|||| .+|+.+++.|.++|.+|.. |++++.++
T Consensus 1 I~V~GatG--~vG~~l~~~L~~~~~~V~~~~R~~~~~~~ 37 (183)
T PF13460_consen 1 ILVFGATG--FVGRALAKQLLRRGHEVTALVRSPSKAED 37 (183)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTSEEEEEESSGGGHHH
T ss_pred eEEECCCC--hHHHHHHHHHHHCCCEEEEEecCchhccc
Confidence 78999999 9999999999999999999 88887775
No 25
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.44 E-value=0.0058 Score=64.70 Aligned_cols=138 Identities=21% Similarity=0.247 Sum_probs=88.2
Q ss_pred ecCChhHHHHHHhcCcCC--CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec
Q 006590 445 VDGSSLAAAVVVNSLPKT--TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST 519 (639)
Q Consensus 445 v~Gnsltaavv~~~ip~~--~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~ 519 (639)
|||-.+.-+-.-+.++.+ .++|++.||-| -+|||+.+|.+.|+ ++++ |+.+|.++|++..++... . ++..
T Consensus 106 TD~~G~~~~L~~~~~~~~~~~~~vlilGAGG---AarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~-~~~~ 180 (283)
T COG0169 106 TDGIGFLRALKEFGLPVDVTGKRVLILGAGG---AARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-A-VEAA 180 (283)
T ss_pred CCHHHHHHHHHhcCCCcccCCCEEEEECCcH---HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-c-cccc
Confidence 677777666665565554 48999999998 48999999999995 5777 999999999988665432 1 1122
Q ss_pred c---cccc-ceeEEE----EcCcCCh----hhhhcCCCCceeecccccCCc-----CCC-CCceeecCCccccCCCCccc
Q 006590 520 S---YAAH-KTKIWL----VGDDLTG----KEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSNM 581 (639)
Q Consensus 520 ~---~~~~-~~~vwi----vg~~~~~----~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~P~~~~~~ 581 (639)
. ++.. +.+++| +|-.-.+ -+-.-.++++++.|+.=.|.+ ..| +=|.+.++..|-+- |+.
T Consensus 181 ~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~~idGl~Mlv~---Qaa 257 (283)
T COG0169 181 ALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAKTIDGLGMLVH---QAA 257 (283)
T ss_pred cccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCeEECcHHHHHH---HHH
Confidence 2 2222 467777 2221111 111234888888888855544 223 56777777777664 444
Q ss_pred cccccccCc
Q 006590 582 HSCENWLGR 590 (639)
Q Consensus 582 ~~~e~~~p~ 590 (639)
.++|-|.+.
T Consensus 258 ~aF~lwtg~ 266 (283)
T COG0169 258 EAFELWTGV 266 (283)
T ss_pred HHHHHHhCC
Confidence 455555544
No 26
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.35 E-value=0.012 Score=55.10 Aligned_cols=123 Identities=15% Similarity=0.140 Sum_probs=72.5
Q ss_pred cCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 006590 446 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA 522 (639)
Q Consensus 446 ~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 522 (639)
||-.+..|.--..+....++|.++|+ | .+|+++|+.|++.| .+|.+ |+.++.+++.+++.... .. ...++.+
T Consensus 2 d~~g~~~a~~~~~~~~~~~~i~iiG~-G--~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~ 76 (155)
T cd01065 2 DGLGFVRALEEAGIELKGKKVLILGA-G--GAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IA-IAYLDLE 76 (155)
T ss_pred CHHHHHHHHHhhCCCCCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cc-eeecchh
Confidence 44444444443344455688999998 7 99999999999885 67777 88888888877754321 00 1122333
Q ss_pred c--cceeEEEE--cCcC---Chh--hhhcCCCCceeecccccCCc-----CCC-CCceeecCCccc
Q 006590 523 A--HKTKIWLV--GDDL---TGK--EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMI 573 (639)
Q Consensus 523 ~--~~~~vwiv--g~~~---~~~--~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~ 573 (639)
+ .+++++|. .... ++. ....+++|+.++|.+-+|+. +.| ..|.+..+..|-
T Consensus 77 ~~~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~ 142 (155)
T cd01065 77 ELLAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEML 142 (155)
T ss_pred hccccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHH
Confidence 2 55666662 1111 110 01234788888888766552 233 456665555553
No 27
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.31 E-value=0.02 Score=60.62 Aligned_cols=125 Identities=16% Similarity=0.180 Sum_probs=77.1
Q ss_pred HHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHH
Q 006590 405 EADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVA 482 (639)
Q Consensus 405 ~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip--~~~~~V~~~Gatg~~kig~ava 482 (639)
.|+++|++|+.+-..+ ++.. .|. +.+ -..+.+.+++..+ -..++|.++|. | .+|+++|
T Consensus 108 ~a~~~gi~v~~~~~~~---~va~-------~n~----~~~---Ae~ai~~al~~~~~~l~gk~v~IiG~-G--~iG~avA 167 (287)
T TIGR02853 108 LAADAGVKLIELFERD---DVAI-------YNS----IPT---AEGAIMMAIEHTDFTIHGSNVMVLGF-G--RTGMTIA 167 (287)
T ss_pred HHHHCCCeEEEEEecc---ceEE-------Ecc----HhH---HHHHHHHHHHhcCCCCCCCEEEEEcC-h--HHHHHHH
Confidence 6778888888766532 2211 110 000 1123334454432 24679999999 4 8999999
Q ss_pred HHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEEc---CcCChhhhhcCCCCceeecccc
Q 006590 483 SSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---DDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 483 ~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg---~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
+.|...|.+|++ |+.++.++.++. .... +...++++ +++++++.- ..++.+....+++|++++|.+-
T Consensus 168 ~~L~~~G~~V~v~~R~~~~~~~~~~~-g~~~----~~~~~l~~~l~~aDiVint~P~~ii~~~~l~~~k~~aliIDlas 241 (287)
T TIGR02853 168 RTFSALGARVFVGARSSADLARITEM-GLIP----FPLNKLEEKVAEIDIVINTIPALVLTADVLSKLPKHAVIIDLAS 241 (287)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHHC-CCee----ecHHHHHHHhccCCEEEECCChHHhCHHHHhcCCCCeEEEEeCc
Confidence 999999999998 777766655432 1110 11223333 566776632 2356777888999999999993
No 28
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.22 E-value=0.013 Score=67.49 Aligned_cols=59 Identities=19% Similarity=0.363 Sum_probs=49.1
Q ss_pred CChhHHHHHHhcCcC-----CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 447 GSSLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 447 Gnsltaavv~~~ip~-----~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
|.+.....+.+.+|+ +.+.|+|+||+| .||+++++.|+++|.+|.+ |+.++.+.+.+++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATG--gIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l 124 (576)
T PLN03209 59 GATKFSSAAIEAIPKELDTKDEDLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSV 124 (576)
T ss_pred cchhhhhhhhhccccccccCCCCEEEEECCCC--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence 566666777888875 456899999999 9999999999999999987 8888888776653
No 29
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.19 E-value=0.0062 Score=67.69 Aligned_cols=210 Identities=11% Similarity=0.106 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 006590 395 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR 469 (639)
Q Consensus 395 in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~-----~~~~V~~~ 469 (639)
|=.+|-+|...|.+.|.-=--|. . |=.. .+.+.|.-. =+.++-.|..=.+.++++-..+ ..++|+|+
T Consensus 116 IlgQVK~A~~~A~~~g~~g~~L~---~---lf~~-A~~~aKrVr-teT~I~~~~vSv~~~Av~la~~~~~~l~~kkvlvi 187 (414)
T PRK13940 116 ILGQVKDSYTLSKKNHAIGKELD---R---VFQK-VFATAKRVR-SETRIGHCPVSVAFSAITLAKRQLDNISSKNVLII 187 (414)
T ss_pred HHHHHHHHHHHHHHcCCchHHHH---H---HHHH-HHHHHHHHH-hccCCCCCCcCHHHHHHHHHHHHhcCccCCEEEEE
Confidence 34448888888888876321111 1 1111 244445433 3355656665555555554433 45789999
Q ss_pred cccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEEcC-----cCChhh
Q 006590 470 GTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-----DLTGKE 539 (639)
Q Consensus 470 Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-----~~~~~~ 539 (639)
|+ | ++|+++|.+|+.+|+ ++++ |+.++-++|.++.+... .+....+.+ .+++++|... .++.++
T Consensus 188 Ga-G--~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~---~~~~~~l~~~l~~aDiVI~aT~a~~~vi~~~~ 261 (414)
T PRK13940 188 GA-G--QTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNAS---AHYLSELPQLIKKADIIIAAVNVLEYIVTCKY 261 (414)
T ss_pred cC-c--HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCe---EecHHHHHHHhccCCEEEECcCCCCeeECHHH
Confidence 99 5 899999999999986 4666 88899999988865211 111223332 5677777222 245544
Q ss_pred hhcCCCCceeecccccCCc-C--CC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhh----hhcCCCC
Q 006590 540 QARAPKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEGWDL 610 (639)
Q Consensus 540 q~~a~~G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~----alEgw~~ 610 (639)
. + .+..+++|.+ +|+. + +. +++.+.+-- +++. .++-.+..|...+=.|+.||- .++.|..
T Consensus 262 ~-~-~~~~~~iDLa-vPRdidp~v~~l~~v~l~~iD------dl~~--i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~ 330 (414)
T PRK13940 262 V-G-DKPRVFIDIS-IPQALDPKLGELEQNVYYCVD------DINA--VIEDNKDKRKYESSKAQKIIVKSLEEYLEKEK 330 (414)
T ss_pred h-C-CCCeEEEEeC-CCCCCCccccCcCCeEEEeHH------HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 2 3567999999 7766 2 21 222222111 1221 133345567766667777765 6777765
Q ss_pred C-ccch-h--h-hhHHHHHHHHHh
Q 006590 611 N-ECGQ-T--M-CDIHQVWHASLR 629 (639)
Q Consensus 611 ~-e~G~-i--v-~~i~~i~~aa~k 629 (639)
. .+.. | + ++.++|-+..++
T Consensus 331 ~~~~~p~I~~lr~~~~~i~~~el~ 354 (414)
T PRK13940 331 AIISNSAIKELFQKADGLVDLSLE 354 (414)
T ss_pred hccchHHHHHHHHHHHHHHHHHHH
Confidence 5 5666 5 4 777776554443
No 30
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.09 E-value=0.014 Score=61.60 Aligned_cols=61 Identities=16% Similarity=0.102 Sum_probs=44.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccccceeEEEEcCcCChhhhhc
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR 542 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~ 542 (639)
+|+|+|||| -||+.+++.|.++|.+|.. |+.++...++.. + ..++.||..++++...
T Consensus 2 kIlVtGatG--~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~------------------~-v~~v~~Dl~d~~~l~~ 60 (317)
T CHL00194 2 SLLVIGATG--TLGRQIVRQALDEGYQVRCLVRNLRKASFLKEW------------------G-AELVYGDLSLPETLPP 60 (317)
T ss_pred EEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhc------------------C-CEEEECCCCCHHHHHH
Confidence 699999999 9999999999999999887 665544333211 1 1256677777777666
Q ss_pred CCCC
Q 006590 543 APKG 546 (639)
Q Consensus 543 a~~G 546 (639)
|-+|
T Consensus 61 al~g 64 (317)
T CHL00194 61 SFKG 64 (317)
T ss_pred HHCC
Confidence 6666
No 31
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=96.07 E-value=0.027 Score=60.23 Aligned_cols=140 Identities=18% Similarity=0.101 Sum_probs=85.9
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006590 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 408 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig 478 (639)
-.|+|+++.--=|....+..--++.+.-+|+ +.-+-+.||+.+|+ |++.+-+ |++.+.+.++|+- ..|
T Consensus 64 ~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGaG---~QA 140 (313)
T PF02423_consen 64 VAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGAG---VQA 140 (313)
T ss_dssp EEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE--S---HHH
T ss_pred EEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECCC---HHH
Confidence 4688888864444433343333455555544 35588999999984 3333333 6788899999987 999
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEE----cC---cCChhhhhcCCC
Q 006590 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD---DLTGKEQARAPK 545 (639)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~---~~~~~~q~~a~~ 545 (639)
+.-+++|+ +.-.+|.+ |++++.+++.+++.. .+.....+.+.++ ++++|++. .+ .++.+ +.++
T Consensus 141 ~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDii~taT~s~~~~P~~~~~---~l~~ 216 (313)
T PF02423_consen 141 RWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVRGADIIVTATPSTTPAPVFDAE---WLKP 216 (313)
T ss_dssp HHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHTTSSEEEE----SSEEESB-GG---GS-T
T ss_pred HHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcccCCEEEEccCCCCCCccccHH---HcCC
Confidence 99999998 45445555 999999999999776 4445345556664 88888772 22 34444 4589
Q ss_pred Cceeecccc
Q 006590 546 GTIFIPYTQ 554 (639)
Q Consensus 546 G~~f~~~~~ 554 (639)
|+++..+.-
T Consensus 217 g~hi~~iGs 225 (313)
T PF02423_consen 217 GTHINAIGS 225 (313)
T ss_dssp T-EEEE-S-
T ss_pred CcEEEEecC
Confidence 999988875
No 32
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.05 E-value=0.058 Score=58.01 Aligned_cols=140 Identities=17% Similarity=0.148 Sum_probs=90.8
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006590 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 408 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig 478 (639)
-.|+|+++.--=|....|..-.++.+.-+|+ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+- ..|
T Consensus 64 ~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~G---~qA 140 (325)
T TIGR02371 64 MAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGAG---RQA 140 (325)
T ss_pred eEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHH
Confidence 3688888753333323333334456666655 45699999999985 2333444 6688899999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEE-c---C-cCChhhhhcCCCCc
Q 006590 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-G---D-DLTGKEQARAPKGT 547 (639)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-g---~-~~~~~~q~~a~~G~ 547 (639)
++-+++|+ +...+|.+ |++++.+.+.+++.+ .+.....+.+.++ ++++|++. - + .++++ +.+||+
T Consensus 141 ~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~-~g~~v~~~~~~~eav~~aDiVitaT~s~~P~~~~~---~l~~g~ 216 (325)
T TIGR02371 141 WTQLEALSRVFDLEEVSVYCRTPSTREKFALRASD-YEVPVRAATDPREAVEGCDILVTTTPSRKPVVKAD---WVSEGT 216 (325)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHh-hCCcEEEeCCHHHHhccCCEEEEecCCCCcEecHH---HcCCCC
Confidence 99888877 66677777 999999988887642 2222112335553 77877662 1 2 22333 449999
Q ss_pred eeecccc
Q 006590 548 IFIPYTQ 554 (639)
Q Consensus 548 ~f~~~~~ 554 (639)
+++.+..
T Consensus 217 ~v~~vGs 223 (325)
T TIGR02371 217 HINAIGA 223 (325)
T ss_pred EEEecCC
Confidence 9998864
No 33
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.04 E-value=0.035 Score=59.20 Aligned_cols=132 Identities=13% Similarity=0.043 Sum_probs=89.8
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcCcCCCcEEEEecccCchhhHHH
Q 006590 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSLPKTTAHVLLRGTVTANKVANA 480 (639)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~ip~~~~~V~~~Gatg~~kig~a 480 (639)
.|+|+++-+ . |+-.++.+.-+|+ +.-..+.||+.+|+ |++.+-..++.+.+.++|+- ..|+.
T Consensus 62 ~g~K~~~~~---~----~~~~g~v~L~d~~TG~p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGaG---~QA~~ 131 (301)
T PRK06407 62 AGLKTYIAG---R----NGARFVVLLFDVNNPELVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGSG---FQAET 131 (301)
T ss_pred eEEEEEecC---C----CCccEEEEEEECCCCCEEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECCc---HHHHH
Confidence 577776642 1 2222355555555 45589999999986 45556667788999999987 89999
Q ss_pred HHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEE----EcCc-CChhhhhcCCCCcee
Q 006590 481 VASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDD-LTGKEQARAPKGTIF 549 (639)
Q Consensus 481 va~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~-~~~~~q~~a~~G~~f 549 (639)
-++++| +.-.+|.+ |++++.+++.+++....+....-+.+.++ ++++|++ ..+. ++.+. .+||+|+
T Consensus 132 ~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P~~~~~~---l~pg~hV 208 (301)
T PRK06407 132 QLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTPIFNRKY---LGDEYHV 208 (301)
T ss_pred HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCcEecHHH---cCCCceE
Confidence 999999 55556666 99999999988876544334223445654 8888877 1222 34443 4789998
Q ss_pred eccc
Q 006590 550 IPYT 553 (639)
Q Consensus 550 ~~~~ 553 (639)
..+-
T Consensus 209 ~aiG 212 (301)
T PRK06407 209 NLAG 212 (301)
T ss_pred EecC
Confidence 8874
No 34
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.02 E-value=0.046 Score=58.23 Aligned_cols=138 Identities=12% Similarity=0.096 Sum_probs=90.6
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006590 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (639)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig~ 479 (639)
.|+|+++.--=|..+.|..--++.+.-+|+ +.-.-+.||+.+|+ |++.+-+ +++.++|.++|+- ..|+
T Consensus 62 ~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGaG---~qa~ 138 (304)
T PRK07340 62 AITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGTG---VQAR 138 (304)
T ss_pred cEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHHH
Confidence 578887743333333333333456666655 45599999999985 3444555 5688899999994 8999
Q ss_pred HHHHHHhc-cC-cEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEE----EcCcCChhhhhcCCCCcee
Q 006590 480 AVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDLTGKEQARAPKGTIF 549 (639)
Q Consensus 480 ava~~L~~-~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~~~~~q~~a~~G~~f 549 (639)
+.+++||. ++ .+|.+ |++++.+++.+++... ... +...+.++ ++++|++ ..+.+=+++ .+||+|+
T Consensus 139 ~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~-~~~-~~~~~~~~av~~aDiVitaT~s~~Pl~~~~---~~~g~hi 213 (304)
T PRK07340 139 AHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL-GPT-AEPLDGEAIPEAVDLVVTATTSRTPVYPEA---ARAGRLV 213 (304)
T ss_pred HHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc-CCe-eEECCHHHHhhcCCEEEEccCCCCceeCcc---CCCCCEE
Confidence 99999983 55 45666 9999999998887532 112 12334553 7788877 222222223 4899999
Q ss_pred ecccc
Q 006590 550 IPYTQ 554 (639)
Q Consensus 550 ~~~~~ 554 (639)
..+.-
T Consensus 214 ~~iGs 218 (304)
T PRK07340 214 VAVGA 218 (304)
T ss_pred EecCC
Confidence 88874
No 35
>PRK09186 flagellin modification protein A; Provisional
Probab=96.02 E-value=0.014 Score=58.54 Aligned_cols=44 Identities=18% Similarity=0.249 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 4 ~k~vlItGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~ 49 (256)
T PRK09186 4 GKTILITGAGG--LIGSALVKAILEAGGIVIAADIDKEALNELLESLG 49 (256)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 88888887776653
No 36
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.016 Score=58.33 Aligned_cols=46 Identities=22% Similarity=0.255 Sum_probs=40.3
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 460 p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+...+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++++++
T Consensus 6 ~~~~k~ilItGasg--~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 53 (258)
T PRK06949 6 NLEGKVALVTGASS--GLGARFAQVLAQAGAKVVLASRRVERLKELRAEI 53 (258)
T ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 34567999999998 9999999999999999988 8888888887764
No 37
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.91 E-value=0.023 Score=55.78 Aligned_cols=85 Identities=15% Similarity=0.142 Sum_probs=56.6
Q ss_pred hhHHHHHHhcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccc
Q 006590 449 SLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH 524 (639)
Q Consensus 449 sltaavv~~~ip~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 524 (639)
+.++.-.++++.. ..++|+|+|+.. -+|..+|.+|.++|.+|++ |+.+ ++++.+ +
T Consensus 28 ~~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r~~~---~l~~~l----------------~ 86 (168)
T cd01080 28 PAGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHSKTK---NLKEHT----------------K 86 (168)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEECCch---hHHHHH----------------h
Confidence 4444445555543 689999999963 4699999999999999888 4322 222211 2
Q ss_pred ceeEEE----EcCcCChhhhhcCCCCceeecccccCCc
Q 006590 525 KTKIWL----VGDDLTGKEQARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 525 ~~~vwi----vg~~~~~~~q~~a~~G~~f~~~~~~~~~ 558 (639)
+++++| ..+.+++++. ++|+++||++ +|+.
T Consensus 87 ~aDiVIsat~~~~ii~~~~~---~~~~viIDla-~prd 120 (168)
T cd01080 87 QADIVIVAVGKPGLVKGDMV---KPGAVVIDVG-INRV 120 (168)
T ss_pred hCCEEEEcCCCCceecHHHc---cCCeEEEEcc-CCCc
Confidence 344444 1235677655 7799999999 7775
No 38
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.89 E-value=0.019 Score=56.17 Aligned_cols=88 Identities=20% Similarity=0.279 Sum_probs=61.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccc-c-cceeEEE--Ec--CcC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG--DDL 535 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--vg--~~~ 535 (639)
.-++|+|+|-- ++|+.||+.|...|.+|++...|....+|... .++ ++.+++ + .+++++| -| +.|
T Consensus 22 ~Gk~vvV~GYG---~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf-----~v~~~~~a~~~adi~vtaTG~~~vi 92 (162)
T PF00670_consen 22 AGKRVVVIGYG---KVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGF-----EVMTLEEALRDADIFVTATGNKDVI 92 (162)
T ss_dssp TTSEEEEE--S---HHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT------EEE-HHHHTTT-SEEEE-SSSSSSB
T ss_pred CCCEEEEeCCC---cccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCc-----EecCHHHHHhhCCEEEECCCCcccc
Confidence 56789999987 99999999999999999996667777776653 333 244544 3 6667766 34 568
Q ss_pred ChhhhhcCCCCceeecccccCCc
Q 006590 536 TGKEQARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 536 ~~~~q~~a~~G~~f~~~~~~~~~ 558 (639)
+.|+...+|.|++.+....++-+
T Consensus 93 ~~e~~~~mkdgail~n~Gh~d~E 115 (162)
T PF00670_consen 93 TGEHFRQMKDGAILANAGHFDVE 115 (162)
T ss_dssp -HHHHHHS-TTEEEEESSSSTTS
T ss_pred CHHHHHHhcCCeEEeccCcCcee
Confidence 99999999999999998876655
No 39
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=95.83 E-value=0.022 Score=60.73 Aligned_cols=151 Identities=17% Similarity=0.194 Sum_probs=108.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEE----EcCcCC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDLT 536 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~~ 536 (639)
-+.++++|-. +||.-||.+|--.|-+|.+..-|..-.||.... ++ +++++++ +..+|.| --|+|+
T Consensus 214 GKv~Vv~GYG---dVGKgCaqaLkg~g~~VivTEiDPI~ALQAaMe-G~-----~V~tm~ea~~e~difVTtTGc~dii~ 284 (434)
T KOG1370|consen 214 GKVAVVCGYG---DVGKGCAQALKGFGARVIVTEIDPICALQAAME-GY-----EVTTLEEAIREVDIFVTTTGCKDIIT 284 (434)
T ss_pred ccEEEEeccC---ccchhHHHHHhhcCcEEEEeccCchHHHHHHhh-cc-----EeeeHHHhhhcCCEEEEccCCcchhh
Confidence 4556666655 999999999999999999977788888877632 22 4777774 7777777 347889
Q ss_pred hhhhhcCCCCceeecccccCCc----CCCCC-------------ceeecCCcccc--CCCCccccccccccCcchhHHHH
Q 006590 537 GKEQARAPKGTIFIPYTQIPPR----KLRKD-------------CFYHSTPAMII--PPSLSNMHSCENWLGRRVMSAWR 597 (639)
Q Consensus 537 ~~~q~~a~~G~~f~~~~~~~~~----~~R~d-------------c~y~~~~a~~~--P~~~~~~~~~e~~~p~~~~~Ac~ 597 (639)
.+..++||.++++|-.-.|+-+ -+|.+ ...+++-.+.+ -+-+-|+. |-.+.|.=+||-.+
T Consensus 285 ~~H~~~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL~-CatghpSFvmS~sf 363 (434)
T KOG1370|consen 285 GEHFDQMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNLG-CATGHPSFVMSNSF 363 (434)
T ss_pred HHHHHhCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeecc-cccCCCceEEecch
Confidence 9999999999999988775544 22211 11222222221 12367787 99999999999999
Q ss_pred HhhhhhhhcCCCCCc----cch-h-hhhHHHH
Q 006590 598 IAGIIHALEGWDLNE----CGQ-T-MCDIHQV 623 (639)
Q Consensus 598 a~~~v~alEgw~~~e----~G~-i-v~~i~~i 623 (639)
.--++.-+|=|++.+ .|- + ..++|+-
T Consensus 364 tnQvlAqIeLwt~p~~kY~~~V~~LPKklDE~ 395 (434)
T KOG1370|consen 364 TNQVLAQIELWTAPEGKYKVGVYVLPKKLDEY 395 (434)
T ss_pred HHHHHHHHHHhcCCCCccccceEecchhhHHH
Confidence 999999999999885 333 2 3777764
No 40
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.83 E-value=0.023 Score=59.95 Aligned_cols=127 Identities=15% Similarity=0.102 Sum_probs=73.5
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcccccc-ceeeecc
Q 006590 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQH-NLVLSTS 520 (639)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~-~l~~~~~ 520 (639)
|||-....+.--+......++|++.|+- -.|+|+|..|++.|+ ++++ |+.++.++|.+++...... ......+
T Consensus 109 TD~~G~~~~l~~~~~~~~~k~vlIlGaG---Gaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~ 185 (284)
T PRK12549 109 TDWSGFAESFRRGLPDASLERVVQLGAG---GAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD 185 (284)
T ss_pred CCHHHHHHHHHhhccCccCCEEEEECCc---HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc
Confidence 5565555544322122345789999997 589999999999998 6777 8999999998876433211 1111112
Q ss_pred cc-c-cceeEEE----EcCcC---ChhhhhcCCCCceeecccccCCc-----CCC-CCceeecCCcccc
Q 006590 521 YA-A-HKTKIWL----VGDDL---TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 574 (639)
Q Consensus 521 ~~-~-~~~~vwi----vg~~~---~~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~ 574 (639)
+. + ++++++| +|-.- .|-+....+++..+.|++--|+. .-| +-|....+..|-+
T Consensus 186 ~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~ML~ 254 (284)
T PRK12549 186 LAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLETELLRAARALGCRTLDGGGMAV 254 (284)
T ss_pred hHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCCHHHHHHHHCCCeEecCHHHHH
Confidence 22 2 5677777 33110 11122334667777777733322 112 4566666666643
No 41
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.81 E-value=0.028 Score=59.72 Aligned_cols=87 Identities=17% Similarity=0.213 Sum_probs=60.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEE--c-Cc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--G-DD 534 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g-~~ 534 (639)
..++|+++|+ | .+|++++..|.+.|.+|++ |+.++.+..++ .+... +...++++ ++++++|. . ..
T Consensus 151 ~g~kvlViG~-G--~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~----~~~~~l~~~l~~aDiVI~t~p~~~ 222 (296)
T PRK08306 151 HGSNVLVLGF-G--RTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSP----FHLSELAEEVGKIDIIFNTIPALV 222 (296)
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCee----ecHHHHHHHhCCCCEEEECCChhh
Confidence 4689999997 5 8999999999999999998 66666554432 22211 11223332 56677662 2 23
Q ss_pred CChhhhhcCCCCceeecccccCC
Q 006590 535 LTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 535 ~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
++++....+++|++++|++ ..|
T Consensus 223 i~~~~l~~~~~g~vIIDla-~~p 244 (296)
T PRK08306 223 LTKEVLSKMPPEALIIDLA-SKP 244 (296)
T ss_pred hhHHHHHcCCCCcEEEEEc-cCC
Confidence 6777778899999999999 444
No 42
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=95.78 E-value=0.016 Score=61.78 Aligned_cols=148 Identities=16% Similarity=0.203 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 006590 395 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR 469 (639)
Q Consensus 395 in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~-----~~~~V~~~ 469 (639)
|=.++.+|...|++.|.-=- .||. |=.. -+.+.|.-. -+..+-.|..=++..+++...+ ..++|+++
T Consensus 113 IlgQvk~A~~~a~~~g~~~~---~L~~---lf~~-a~~~~k~vr-~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~Vi 184 (311)
T cd05213 113 ILGQVKNAYKLAKEAGTSGK---LLNR---LFQK-AIKVGKRVR-TETGISRGAVSISSAAVELAEKIFGNLKGKKVLVI 184 (311)
T ss_pred HHHHHHHHHHHHHHcCCchH---HHHH---HHHH-HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEE
Confidence 33448899999998876211 1121 1111 122333311 2244444443333334444433 47889999
Q ss_pred cccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEEcCcCC-h----hh
Q 006590 470 GTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT-G----KE 539 (639)
Q Consensus 470 Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~-~----~~ 539 (639)
|+ | .+|+.+++.|+++| .+|++ |+.++.++++++++... +...++++ ..++++|.-..-. + ++
T Consensus 185 Ga-G--~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~~~~~l~~aDvVi~at~~~~~~~~~~~ 257 (311)
T cd05213 185 GA-G--EMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNA----VPLDELLELLNEADVVISATGAPHYAKIVER 257 (311)
T ss_pred Cc-H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeE----EeHHHHHHHHhcCCEEEECCCCCchHHHHHH
Confidence 98 6 99999999999766 56666 88889999988875421 11223332 5677766322211 1 11
Q ss_pred hh-cC-CCCceeecccccCCc
Q 006590 540 QA-RA-PKGTIFIPYTQIPPR 558 (639)
Q Consensus 540 q~-~a-~~G~~f~~~~~~~~~ 558 (639)
.. .. .+|.+++|.+ +|+.
T Consensus 258 ~~~~~~~~~~~viDla-vPrd 277 (311)
T cd05213 258 AMKKRSGKPRLIVDLA-VPRD 277 (311)
T ss_pred HHhhCCCCCeEEEEeC-CCCC
Confidence 11 11 2578999998 6655
No 43
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.023 Score=58.15 Aligned_cols=44 Identities=20% Similarity=0.277 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+++|+|+|++| -||+++|+.|+++|.+|.+ |+.++.++++++.+
T Consensus 2 ~k~vlVtGasg--~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (276)
T PRK06482 2 SKTWFITGASS--GFGRGMTERLLARGDRVAATVRRPDALDDLKARYG 47 (276)
T ss_pred CCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc
Confidence 35799999998 9999999999999999988 88888888877644
No 44
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.019 Score=57.96 Aligned_cols=45 Identities=29% Similarity=0.320 Sum_probs=39.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 8 ~~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 54 (253)
T PRK05867 8 HGKRALITGAST--GIGKRVALAYVEAGAQVAIAARHLDALEKLADEIG 54 (253)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence 457899999997 9999999999999999998 88888888877653
No 45
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.74 E-value=0.027 Score=59.53 Aligned_cols=62 Identities=16% Similarity=0.190 Sum_probs=43.9
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cch---hhHHHHHhhCcc
Q 006590 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLRIPV 509 (639)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~---~~~~~l~~~~~~ 509 (639)
|||.-...+.--.......+.|+++|| | -+|+|+|..|++.|.+ |.+ |+. ++.+++.+++..
T Consensus 108 TD~~G~~~~l~~~~~~~~~k~vlI~GA-G--GagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~ 175 (289)
T PRK12548 108 TDGLGFVRNLREHGVDVKGKKLTVIGA-G--GAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ 175 (289)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh
Confidence 555555554432233334578999999 5 7999999999999987 877 765 677777776543
No 46
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.017 Score=59.13 Aligned_cols=45 Identities=16% Similarity=0.193 Sum_probs=39.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++++++++++..
T Consensus 8 ~k~~lItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 54 (263)
T PRK08339 8 GKLAFTTASSK--GIGFGVARVLARAGADVILLSRNEENLKKAREKIKS 54 (263)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46789999997 9999999999999999998 888888888776543
No 47
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.025 Score=57.63 Aligned_cols=44 Identities=25% Similarity=0.307 Sum_probs=38.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++.
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (261)
T PRK08265 6 GKVAIVTGGAT--LIGAAVARALVAAGARVAIVDIDADNGAAVAASLG 51 (261)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 46899999998 9999999999999999998 88888888877763
No 48
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.69 E-value=0.078 Score=56.70 Aligned_cols=138 Identities=21% Similarity=0.189 Sum_probs=86.4
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006590 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (639)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig~ 479 (639)
.|+|+++---=|....+-.--++.+.-+++ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+ | ..|+
T Consensus 62 ~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~-G--~~a~ 138 (314)
T PRK06141 62 IGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGT-G--RLAS 138 (314)
T ss_pred eEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECC-c--HHHH
Confidence 588888843323222222222355666665 45599999999984 2333333 567889999996 5 9999
Q ss_pred HHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-cceeEEEE--c--Cc-CChhhhhcCCCCce
Q 006590 480 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV--G--DD-LTGKEQARAPKGTI 548 (639)
Q Consensus 480 ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwiv--g--~~-~~~~~q~~a~~G~~ 548 (639)
.++++++ +...+|.+ |++++.+++.+++... +....-..+.+ + ++++|++. . +. ++. .+.++|++
T Consensus 139 ~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~-g~~~~~~~~~~~av~~aDIVi~aT~s~~pvl~~---~~l~~g~~ 214 (314)
T PRK06141 139 LLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQ-GFDAEVVTDLEAAVRQADIISCATLSTEPLVRG---EWLKPGTH 214 (314)
T ss_pred HHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhc-CCceEEeCCHHHHHhcCCEEEEeeCCCCCEecH---HHcCCCCE
Confidence 9999888 34466777 9999999998886432 11211223444 3 67777662 1 11 333 34589997
Q ss_pred eeccc
Q 006590 549 FIPYT 553 (639)
Q Consensus 549 f~~~~ 553 (639)
+..+.
T Consensus 215 i~~ig 219 (314)
T PRK06141 215 LDLVG 219 (314)
T ss_pred EEeeC
Confidence 66554
No 49
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.67 E-value=0.049 Score=62.37 Aligned_cols=146 Identities=19% Similarity=0.244 Sum_probs=90.7
Q ss_pred EEEeecccCcccceeEEeeccCcccccchhhHHHHHHHHHHHHHHHHcCCc--EEEecccccc------cccccCCceee
Q 006590 362 FVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVK--VISLGLLNQG------EELNRNGEIYL 433 (639)
Q Consensus 362 f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~I~~Ai~~A~k~G~k--v~~LG~ln~~------e~ln~~g~~~~ 433 (639)
|+=+.-.+.+.+.+- +|-+|. ++ -...+++.+++ +++...+++. +.+|..| +.+
T Consensus 146 fiDdd~~~~g~~i~G--v~V~g~--------------~~-i~~~v~~~~~~~iiiAips~~~~~~~~i~~~l~~~~-~~v 207 (588)
T COG1086 146 FLDDDPDLTGMKIRG--VPVLGR--------------IE-IERVVEELGIQLILIAIPSASQEERRRILLRLARTG-IAV 207 (588)
T ss_pred EECCChhhcCCEEec--eeeech--------------hH-HHHHHHHcCCceEEEecCCCCHHHHHHHHHHHHhcC-CcE
Confidence 444444444444443 666654 44 34456777777 6676666665 5677777 677
Q ss_pred ecCCCCcceeeecCChhHHHHHHhcCcC--------------------CCcEEEEecccCchhhHHHHHHHHhccCcEEE
Q 006590 434 ERQPNKLKIKVVDGSSLAAAVVVNSLPK--------------------TTAHVLLRGTVTANKVANAVASSLCQMGIKVA 493 (639)
Q Consensus 434 ~k~p~~L~irvv~Gnsltaavv~~~ip~--------------------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~ 493 (639)
..-|+ +.. +++ -+.-+++|.- +.++|+++||+| +||+.+|+-+++.+.+.+
T Consensus 208 ~~lP~-~~~-l~~-----~~~~lreI~ieDLLgR~pV~~d~~~i~~~~~gK~vLVTGagG--SiGsel~~qil~~~p~~i 278 (588)
T COG1086 208 RILPQ-LTD-LKD-----LNGQLREIEIEDLLGRPPVALDTELIGAMLTGKTVLVTGGGG--SIGSELCRQILKFNPKEI 278 (588)
T ss_pred EecCc-HHH-HHH-----hccccccCCHHHHhCCCCCCCCHHHHHhHcCCCEEEEeCCCC--cHHHHHHHHHHhcCCCEE
Confidence 76666 431 111 1111344421 478999999999 999999999998787776
Q ss_pred e---cchhhHHHHHhhCccccccceeeecccccccee-EEEEcCcCChhhhhcCCCC
Q 006590 494 T---ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTK-IWLVGDDLTGKEQARAPKG 546 (639)
Q Consensus 494 ~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-vwivg~~~~~~~q~~a~~G 546 (639)
+ +++-....+++++.+..+ + .| .-+.||.-|.+-...|-.|
T Consensus 279 ~l~~~~E~~~~~i~~el~~~~~-~-----------~~~~~~igdVrD~~~~~~~~~~ 323 (588)
T COG1086 279 ILFSRDEYKLYLIDMELREKFP-E-----------LKLRFYIGDVRDRDRVERAMEG 323 (588)
T ss_pred EEecCchHHHHHHHHHHHhhCC-C-----------cceEEEecccccHHHHHHHHhc
Confidence 6 666677777777665442 1 22 2456777777666555444
No 50
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.66 E-value=0.021 Score=57.11 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=35.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 5 ~~vlItGa~g--~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 49 (250)
T PRK08063 5 KVALVTGSSR--GIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI 49 (250)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 5799999998 9999999999999999765 7777777666554
No 51
>PRK06823 ornithine cyclodeaminase; Validated
Probab=95.56 E-value=0.11 Score=55.69 Aligned_cols=139 Identities=17% Similarity=0.076 Sum_probs=89.0
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-Ccceeee-cCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006590 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVV-DGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv-~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig 478 (639)
.|+|+++.--=|....+-.--++.+.-+|+ +.-+.+. ||+.+|+ |+..+-+ +++.+++.++|+- ..|
T Consensus 64 ~g~K~v~~~p~N~~~glP~~~g~v~l~d~~TG~p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~G---~qA 140 (315)
T PRK06823 64 FVVKVSTGFYDNPAQGLPSNQGLMLAFSAKTGEPQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGTG---IQA 140 (315)
T ss_pred EEEEEEeecCCCccCCCCCeeEEEEEEECCCCceEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECCc---HHH
Confidence 567777643333322232222345555655 3446675 9999975 3334444 6788999999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEE----cC-cCChhhhhcCCCCc
Q 006590 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD-DLTGKEQARAPKGT 547 (639)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~-~~~~~~q~~a~~G~ 547 (639)
+.-++++| +.-.+|.+ |++++-+++++++.+. +....-+.+.++ ++++|++. .+ .++.+ +.+||+
T Consensus 141 ~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIV~taT~s~~P~~~~~---~l~~G~ 216 (315)
T PRK06823 141 RMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL-GFAVNTTLDAAEVAHAANLIVTTTPSREPLLQAE---DIQPGT 216 (315)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc-CCcEEEECCHHHHhcCCCEEEEecCCCCceeCHH---HcCCCc
Confidence 99999999 66667777 9999999988776432 233222335654 78888772 11 23444 448999
Q ss_pred eeecccc
Q 006590 548 IFIPYTQ 554 (639)
Q Consensus 548 ~f~~~~~ 554 (639)
++..+.-
T Consensus 217 hi~~iGs 223 (315)
T PRK06823 217 HITAVGA 223 (315)
T ss_pred EEEecCC
Confidence 9998863
No 52
>PRK06046 alanine dehydrogenase; Validated
Probab=95.54 E-value=0.1 Score=56.11 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=88.6
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006590 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 408 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig 478 (639)
..|+|+++.--=|..+.+..-.++.+.-+++ +.-..+.||+.+|+ |++.+-+ +++.+.|.++|+- ..|
T Consensus 65 ~~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~G---~qa 141 (326)
T PRK06046 65 IAGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGAG---NQA 141 (326)
T ss_pred eEEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence 3678887754334333333322355555554 45589999999985 2333555 6788899999987 789
Q ss_pred HHHHHHHh-ccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc-cceeEEEEcC-----cCChhhhhcCCCCce
Q 006590 479 NAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGD-----DLTGKEQARAPKGTI 548 (639)
Q Consensus 479 ~ava~~L~-~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg~-----~~~~~~q~~a~~G~~ 548 (639)
++.++.|+ .++++... |++++.+++++++.+..........++++ ..+++++.-. .++.+ +.++|+|
T Consensus 142 ~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~aDiVv~aTps~~P~~~~~---~l~~g~h 218 (326)
T PRK06046 142 RTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACDCDILVTTTPSRKPVVKAE---WIKEGTH 218 (326)
T ss_pred HHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhhCCEEEEecCCCCcEecHH---HcCCCCE
Confidence 99999998 44555544 88999999888865433322112334554 2277755211 12333 4489999
Q ss_pred eecccc
Q 006590 549 FIPYTQ 554 (639)
Q Consensus 549 f~~~~~ 554 (639)
+..+.-
T Consensus 219 V~~iGs 224 (326)
T PRK06046 219 INAIGA 224 (326)
T ss_pred EEecCC
Confidence 988863
No 53
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.026 Score=56.36 Aligned_cols=43 Identities=21% Similarity=0.356 Sum_probs=37.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 6 ~k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (241)
T PRK07454 6 MPRALITGASS--GIGKATALAFAKAGWDLALVARSQDALEALAAEL 50 (241)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 8888777776654
No 54
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.51 E-value=0.029 Score=56.54 Aligned_cols=45 Identities=20% Similarity=0.213 Sum_probs=38.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| .||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 9 ~~k~vlItGa~g--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~ 55 (255)
T PRK07523 9 TGRRALVTGSSQ--GIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLK 55 (255)
T ss_pred CCCEEEEECCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 356899999998 9999999999999999998 88887777666653
No 55
>PRK06196 oxidoreductase; Provisional
Probab=95.48 E-value=0.026 Score=59.36 Aligned_cols=55 Identities=16% Similarity=0.132 Sum_probs=45.4
Q ss_pred HHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 451 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 451 taavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
++..+++.++...+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasg--gIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l 70 (315)
T PRK06196 14 TAEEVLAGHDLSGKTAIVTGGYS--GLGLETTRALAQAGAHVIVPARRPDVAREALAGI 70 (315)
T ss_pred cHHHHhcCCCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 35555666665567899999998 9999999999999999998 8888888776664
No 56
>PRK06924 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.031 Score=56.01 Aligned_cols=41 Identities=24% Similarity=0.372 Sum_probs=33.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~ 506 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |++ ++++++.++
T Consensus 2 k~vlItGasg--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~ 45 (251)
T PRK06924 2 RYVIITGTSQ--GLGEAIANQLLEKGTHVISISRTENKELTKLAEQ 45 (251)
T ss_pred cEEEEecCCc--hHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc
Confidence 4799999998 9999999999999999988 655 556555443
No 57
>PRK07589 ornithine cyclodeaminase; Validated
Probab=95.43 E-value=0.1 Score=56.92 Aligned_cols=139 Identities=14% Similarity=0.007 Sum_probs=91.6
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006590 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 408 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig 478 (639)
-.|+|+++.=-=|....+-.--+..+.-+++ +.-+-+.||+.+|+ |+..+-+ +++.+++.++|+- ..|
T Consensus 65 ~~gvK~v~~~p~N~~~glP~i~g~v~L~D~~TG~p~Alldg~~lT~~RTaA~sala~~~Lar~da~~l~iiGaG---~QA 141 (346)
T PRK07589 65 LYSFKYVNGHPKNTRRGLQTVMAFGVLADVDTGYPLLLSEMTLLTALRTAATSALAAKYLARPDSRTMALIGNG---AQS 141 (346)
T ss_pred ceEEEEEeeCCCccccCCCceeEEEEEEECCCCCEEEEEcCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HHH
Confidence 3678877643334333343333445555554 45589999999984 3344555 6788999999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEEcC-------cCChhhhhcCCC
Q 006590 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-------DLTGKEQARAPK 545 (639)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-------~~~~~~q~~a~~ 545 (639)
+.-++++| +.-.+|.+ |++++.+++.+++... +.+..-+.+.++ ++++|++-=. .++.+ +.++
T Consensus 142 ~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIIvtaT~S~~~~Pvl~~~---~lkp 217 (346)
T PRK07589 142 EFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP-GLRIVACRSVAEAVEGADIITTVTADKTNATILTDD---MVEP 217 (346)
T ss_pred HHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc-CCcEEEeCCHHHHHhcCCEEEEecCCCCCCceecHH---HcCC
Confidence 99999888 66666777 9999999998887542 223222345664 7888877311 13333 5599
Q ss_pred Cceeeccc
Q 006590 546 GTIFIPYT 553 (639)
Q Consensus 546 G~~f~~~~ 553 (639)
|+|+.-+-
T Consensus 218 G~hV~aIG 225 (346)
T PRK07589 218 GMHINAVG 225 (346)
T ss_pred CcEEEecC
Confidence 99988764
No 58
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.39 E-value=0.0089 Score=57.55 Aligned_cols=102 Identities=24% Similarity=0.293 Sum_probs=66.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEE--E------
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--V------ 531 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--v------ 531 (639)
++|-++|- | .+|+++|+.|.+.|.+|.. |++++.++++++- . ....+.++ +.+++++ +
T Consensus 2 ~~Ig~IGl-G--~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-~------~~~~s~~e~~~~~dvvi~~v~~~~~v 71 (163)
T PF03446_consen 2 MKIGFIGL-G--NMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-A------EVADSPAEAAEQADVVILCVPDDDAV 71 (163)
T ss_dssp BEEEEE---S--HHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-E------EEESSHHHHHHHBSEEEE-SSSHHHH
T ss_pred CEEEEEch-H--HHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-h------hhhhhhhhHhhcccceEeecccchhh
Confidence 47889998 4 9999999999999999999 8899999988772 1 11334443 5555544 2
Q ss_pred cCcCChhh-hhcCCCCceeecccccCCc-------CCC-CCceeecCCccccC
Q 006590 532 GDDLTGKE-QARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIP 575 (639)
Q Consensus 532 g~~~~~~~-q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P 575 (639)
.+.+..++ ...+++|+++++.+-.+|+ +++ +.+.|.+.|.+--|
T Consensus 72 ~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~ 124 (163)
T PF03446_consen 72 EAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSGGP 124 (163)
T ss_dssp HHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHH
T ss_pred hhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeeccc
Confidence 12222211 2346899999999998887 222 67889988876544
No 59
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.031 Score=56.32 Aligned_cols=44 Identities=18% Similarity=0.289 Sum_probs=38.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 6 ~k~~lItGas~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (254)
T PRK07478 6 GKVAIITGASS--GIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIR 51 (254)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 88888888877643
No 60
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.35 E-value=0.033 Score=55.75 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=37.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| .||+++|+.|.++|.+|.+ |++++.+++++++
T Consensus 5 ~~vlItG~sg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 48 (258)
T PRK12429 5 KVALVTGAAS--GIGLEIALALAKEGAKVVIADLNDEAAAAAAEAL 48 (258)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 6899999998 9999999999999999988 8888888777664
No 61
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.25 E-value=0.044 Score=55.33 Aligned_cols=44 Identities=25% Similarity=0.258 Sum_probs=38.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 6 ~~~vlItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (257)
T PRK07067 6 GKVALLTGAAS--GIGEAVAERYLAEGARVVIADIKPARARLAALEIG 51 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC
Confidence 46799999998 9999999999999999988 88888888877654
No 62
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.25 E-value=0.024 Score=63.03 Aligned_cols=89 Identities=21% Similarity=0.272 Sum_probs=67.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc--cceeEEEEc----
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---- 532 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg---- 532 (639)
..++|+++||. ++|.-+|.+|+++|++.++ |+.+|-++|.+++..+. +....+.+ .++||+|.+
T Consensus 177 ~~~~vlvIGAG---em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~----~~l~el~~~l~~~DvVissTsa~ 249 (414)
T COG0373 177 KDKKVLVIGAG---EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA----VALEELLEALAEADVVISSTSAP 249 (414)
T ss_pred ccCeEEEEccc---HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee----ecHHHHHHhhhhCCEEEEecCCC
Confidence 68899999998 9999999999999966555 99999999999988332 22233443 677888844
Q ss_pred -CcCChhhhhcC---CCCceeecccccCCc
Q 006590 533 -DDLTGKEQARA---PKGTIFIPYTQIPPR 558 (639)
Q Consensus 533 -~~~~~~~q~~a---~~G~~f~~~~~~~~~ 558 (639)
-+++.++.+.+ +++.+++|++ +|+.
T Consensus 250 ~~ii~~~~ve~a~~~r~~~livDia-vPRd 278 (414)
T COG0373 250 HPIITREMVERALKIRKRLLIVDIA-VPRD 278 (414)
T ss_pred ccccCHHHHHHHHhcccCeEEEEec-CCCC
Confidence 34666665555 4447899999 8887
No 63
>PRK07326 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.039 Score=54.72 Aligned_cols=44 Identities=23% Similarity=0.262 Sum_probs=38.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| .||+++|+.|.++|.+|.+ |+.++.+++.+++.
T Consensus 6 ~~~ilItGatg--~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~ 51 (237)
T PRK07326 6 GKVALITGGSK--GIGFAIAEALLAEGYKVAITARDQKELEEAAAELN 51 (237)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHh
Confidence 36799999998 9999999999999999988 88888887777654
No 64
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.24 E-value=0.034 Score=55.57 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=36.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 2 ~~vlItGa~g--~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 45 (255)
T TIGR01963 2 KTALVTGAAS--GIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA 45 (255)
T ss_pred CEEEEcCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4699999998 9999999999999999988 8888887777654
No 65
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.041 Score=55.68 Aligned_cols=43 Identities=16% Similarity=0.299 Sum_probs=38.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |+++..++++++++
T Consensus 2 k~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 46 (260)
T PRK08267 2 KSIFITGAAS--GIGRATALLFAAEGWRVGAYDINEAGLAALAAELG 46 (260)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999998 88888888877755
No 66
>PRK08643 acetoin reductase; Validated
Probab=95.19 E-value=0.039 Score=55.56 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=37.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 3 k~~lItGas~--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 47 (256)
T PRK08643 3 KVALVTGAGQ--GIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLS 47 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 88888888777653
No 67
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.18 E-value=0.096 Score=57.42 Aligned_cols=92 Identities=14% Similarity=0.169 Sum_probs=65.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEE-----cC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----GD 533 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----g~ 533 (639)
.++|+|+|+ | .+|+.+|+.|.+.|.+|++ ++.++.+.++++..........+...+++ +.++++|- |+
T Consensus 167 ~~~VlViGa-G--~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 167 PGDVTIIGG-G--VVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CceEEEEcC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 345999999 6 9999999999999999888 77888888877654321100000112332 56677663 32
Q ss_pred ----cCChhhhhcCCCCceeecccccCCc
Q 006590 534 ----DLTGKEQARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 534 ----~~~~~~q~~a~~G~~f~~~~~~~~~ 558 (639)
.++.+..+.+++|.+++|++ +++-
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva-~d~G 271 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVA-IDQG 271 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEe-cCCC
Confidence 26889999999999999999 7776
No 68
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.036 Score=55.71 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=38.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 5 ~k~vlItGa~~--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (258)
T PRK07890 5 GKVVVVSGVGP--GLGRTLAVRAARAGADVVLAARTAERLDEVAAEID 50 (258)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 36799999998 9999999999999999998 88888887776653
No 69
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.17 E-value=0.051 Score=54.18 Aligned_cols=44 Identities=14% Similarity=0.273 Sum_probs=38.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|.++|.+|++ |+.++.+.+.+++.
T Consensus 5 ~~~vlItGasg--~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (251)
T PRK07231 5 GKVAIVTGASS--GIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL 50 (251)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 35899999998 9999999999999999988 88888887766643
No 70
>PRK06194 hypothetical protein; Provisional
Probab=95.16 E-value=0.038 Score=56.75 Aligned_cols=43 Identities=14% Similarity=0.251 Sum_probs=37.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++++.+++.
T Consensus 7 k~vlVtGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (287)
T PRK06194 7 KVAVITGAAS--GFGLAFARIGAALGMKLVLADVQQDALDRAVAELR 51 (287)
T ss_pred CEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 77777777766643
No 71
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.038 Score=59.19 Aligned_cols=45 Identities=24% Similarity=0.313 Sum_probs=39.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++++++.
T Consensus 7 ~~k~vlITGas~--gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~ 53 (334)
T PRK07109 7 GRQVVVITGASA--GVGRATARAFARRGAKVVLLARGEEGLEALAAEIR 53 (334)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 356899999998 9999999999999999988 88888888877653
No 72
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.15 E-value=0.046 Score=55.51 Aligned_cols=44 Identities=18% Similarity=0.279 Sum_probs=39.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.++++
T Consensus 6 ~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (263)
T PRK06200 6 GQVALITGGGS--GIGRALVERFLAEGARVAVLERSAEKLASLRQRFG 51 (263)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 35799999997 9999999999999999988 88889988887754
No 73
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.14 E-value=0.024 Score=60.37 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=40.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.|+++||+| -||+++|+.|+++|.+|.+ |++++++++++++..
T Consensus 53 g~~~lITGAs~--GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~ 99 (320)
T PLN02780 53 GSWALVTGPTD--GIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS 99 (320)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
Confidence 36789999997 9999999999999999998 999999988877643
No 74
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.12 E-value=0.086 Score=59.63 Aligned_cols=143 Identities=17% Similarity=0.189 Sum_probs=92.7
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEE--Ec--C
Q 006590 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--D 533 (639)
Q Consensus 460 p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~ 533 (639)
.-..++|.|+|.- .||+++|+.|...|.+|+..+.+....++... .+. +..++++ +.+++++ .| .
T Consensus 251 ~LaGKtVgVIG~G---~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~-----~~~~leell~~ADIVI~atGt~~ 321 (476)
T PTZ00075 251 MIAGKTVVVCGYG---DVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGY-----QVVTLEDVVETADIFVTATGNKD 321 (476)
T ss_pred CcCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCc-----eeccHHHHHhcCCEEEECCCccc
Confidence 3457789999966 89999999999999999883223222222111 111 1234443 5667766 23 4
Q ss_pred cCChhhhhcCCCCceeecccccCCc----CCC--CC--ceee--cCCccccCC----------CCccccccccccCcchh
Q 006590 534 DLTGKEQARAPKGTIFIPYTQIPPR----KLR--KD--CFYH--STPAMIIPP----------SLSNMHSCENWLGRRVM 593 (639)
Q Consensus 534 ~~~~~~q~~a~~G~~f~~~~~~~~~----~~R--~d--c~y~--~~~a~~~P~----------~~~~~~~~e~~~p~~~~ 593 (639)
.++.+....|++|++++.+++++.+ .++ .| +.-. ......+|. .+-|+. |-.+.|..+|
T Consensus 322 iI~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~-~~~GhP~~vM 400 (476)
T PTZ00075 322 IITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLG-CATGHPSFVM 400 (476)
T ss_pred ccCHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccC-CCCCCCeeEe
Confidence 6888999999999999999997633 122 11 1111 111122442 366787 8899999999
Q ss_pred HHHHHhhhhhhhcCCCCCc
Q 006590 594 SAWRIAGIIHALEGWDLNE 612 (639)
Q Consensus 594 ~Ac~a~~~v~alEgw~~~e 612 (639)
+-.++--.+-.+|=|..++
T Consensus 401 d~sfa~Q~la~~~l~~~~~ 419 (476)
T PTZ00075 401 SNSFTNQVLAQIELWENRD 419 (476)
T ss_pred eHHHHHHHHHHHHHHhccC
Confidence 9988877777777665544
No 75
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.06 E-value=0.051 Score=60.44 Aligned_cols=151 Identities=19% Similarity=0.204 Sum_probs=91.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEE-----
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----- 531 (639)
..++|+++|+ | .+|+.++++|++.| .+|++ |+.++.+++.++++... +...++.+ ..++++|.
T Consensus 179 ~~~~VlViGa-G--~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~----i~~~~l~~~l~~aDvVi~aT~s~ 251 (417)
T TIGR01035 179 KGKKALLIGA-G--EMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA----VKFEDLEEYLAEADIVISSTGAP 251 (417)
T ss_pred cCCEEEEECC-h--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE----eeHHHHHHHHhhCCEEEECCCCC
Confidence 4578999998 7 99999999999999 56777 88888888887765421 11223332 56677662
Q ss_pred cCcCChhhhhcCC----CCceeecccccCCc-C--CC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhhhh
Q 006590 532 GDDLTGKEQARAP----KGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGII 602 (639)
Q Consensus 532 g~~~~~~~q~~a~----~G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v 602 (639)
.-.+++++.+.+. .+.+++|.+ +|+. . .. +++.+. .-++++.+ ++..+..|.-.+=.|+.||
T Consensus 252 ~~ii~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~------~vDdl~~~--~~~n~~~r~~~~~~a~~ii 322 (417)
T TIGR01035 252 HPIVSKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLY------DVDDLQPV--VEENLAERREEAEKAEEIV 322 (417)
T ss_pred CceEcHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEE------EHHHHHHH--HHHhHHHHHHHHHHHHHHH
Confidence 1235666665442 356889998 6554 1 11 222211 11122211 3334555666667888887
Q ss_pred h----hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006590 603 H----ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 628 (639)
Q Consensus 603 ~----alEgw~~~-e~G~-i--v-~~i~~i~~aa~ 628 (639)
- +++.|... ..-. | + +++++|-+.-+
T Consensus 323 ~~~~~~f~~w~~~~~~~p~I~~lr~~~~~i~~~el 357 (417)
T TIGR01035 323 EEETAEFKQWLRSLEVEPTIKALRSLAEIVREKEL 357 (417)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 6 67777655 5555 4 3 66666544433
No 76
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.04 E-value=0.07 Score=56.72 Aligned_cols=151 Identities=21% Similarity=0.267 Sum_probs=94.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006590 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (639)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (639)
..+-+.-+..-.+.|++.|++..- |. +++.++++|.|. ++.++.= |++++. +=|||=
T Consensus 43 ~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl 122 (286)
T PRK14175 43 DGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGF 122 (286)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 334555566777788999987654 33 344447788873 3555522 332331 223443
Q ss_pred h----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006590 449 S----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (639)
Q Consensus 449 s----------------ltaavv~~~ip-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (639)
+ -|++.|++-+. -..++|+|+|+.+ -+|+.+|..|.++|..|++ .++. .+|++.
T Consensus 123 ~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~--~VG~pla~lL~~~gatVtv~~s~t--~~l~~~ 198 (286)
T PRK14175 123 HPINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSH--IVGQPVSKLLLQKNASVTILHSRS--KDMASY 198 (286)
T ss_pred CccchHhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCc--hhHHHH
Confidence 2 36666666553 3578999999996 7999999999999999999 2211 111111
Q ss_pred CccccccceeeeccccccceeEEE--EcCc--CChhhhhcCCCCceeecccccCCc---CCCCCcee
Q 006590 507 IPVEAQHNLVLSTSYAAHKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 566 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~~~vwi--vg~~--~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y 566 (639)
+ ++++++| +|+- ++++.. ++|++++|+. +++. ++--||-+
T Consensus 199 ------------~----~~ADIVIsAvg~p~~i~~~~v---k~gavVIDvG-i~~~~~gkl~GDvd~ 245 (286)
T PRK14175 199 ------------L----KDADVIVSAVGKPGLVTKDVV---KEGAVIIDVG-NTPDENGKLKGDVDY 245 (286)
T ss_pred ------------H----hhCCEEEECCCCCcccCHHHc---CCCcEEEEcC-CCcCCCCCeecCccH
Confidence 0 3556655 4544 777654 8999999999 7763 34456553
No 77
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.03 E-value=0.054 Score=54.62 Aligned_cols=45 Identities=16% Similarity=0.316 Sum_probs=38.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 8 ~~k~~lItGas~--giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~ 54 (254)
T PRK08085 8 AGKNILITGSAQ--GIGFLLATGLAEYGAEIIINDITAERAELAVAKLR 54 (254)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH
Confidence 456899999998 9999999999999999999 88888877766653
No 78
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.047 Score=54.81 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=35.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+.|+|+|++| -||+++++.|+++|.+|.. |+.++.+++++.
T Consensus 3 ~~vlVtGasg--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 45 (257)
T PRK09291 3 KTILITGAGS--GFGREVALRLARKGHNVIAGVQIAPQVTALRAE 45 (257)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4799999998 9999999999999999988 777777666554
No 79
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.057 Score=55.50 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=37.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+.+++..
T Consensus 4 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~ 48 (277)
T PRK06180 4 MKTWLITGVSS--GFGRALAQAALAAGHRVVGTVRSEAARADFEALH 48 (277)
T ss_pred CCEEEEecCCC--hHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc
Confidence 45799999998 9999999999999999998 8888888777653
No 80
>PRK06139 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.041 Score=59.02 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=39.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 7 ~k~vlITGAs~--GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~ 52 (330)
T PRK06139 7 GAVVVITGASS--GIGQATAEAFARRGARLVLAARDEEALQAVAEECR 52 (330)
T ss_pred CCEEEEcCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 46899999997 9999999999999999999 99999988877753
No 81
>PRK05717 oxidoreductase; Validated
Probab=94.98 E-value=0.068 Score=54.02 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=37.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ +++++.+++.+++
T Consensus 9 ~~k~vlItG~sg--~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~ 54 (255)
T PRK05717 9 NGRVALVTGAAR--GIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL 54 (255)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc
Confidence 456899999998 9999999999999999988 6777777665554
No 82
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.96 E-value=0.052 Score=54.70 Aligned_cols=45 Identities=16% Similarity=0.159 Sum_probs=38.7
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
...+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++++.+++
T Consensus 9 ~~~k~ilItGas~--~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 55 (256)
T PRK06124 9 LAGQVALVTGSAR--GLGFEIARALAGAGAHVLVNGRNAATLEAAVAAL 55 (256)
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence 3467899999998 9999999999999999999 8778777776664
No 83
>PRK05866 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.055 Score=56.65 Aligned_cols=43 Identities=23% Similarity=0.346 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 40 ~k~vlItGasg--gIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l 84 (293)
T PRK05866 40 GKRILLTGASS--GIGEAAAEQFARRGATVVAVARREDLLDAVADRI 84 (293)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 8888888887765
No 84
>PRK06199 ornithine cyclodeaminase; Validated
Probab=94.92 E-value=0.17 Score=55.88 Aligned_cols=155 Identities=13% Similarity=0.115 Sum_probs=100.7
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006590 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (639)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig~ 479 (639)
.|+|+++.=-=|....+..-.++.+--+|+ +.-.-+.||+.+|+ |+..+-+ +++.+.+.++|+- -.|+
T Consensus 92 ~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~G---~QA~ 168 (379)
T PRK06199 92 AGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGPG---VMGK 168 (379)
T ss_pred eEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECCc---HHHH
Confidence 577877753334433444444566666665 45589999999985 4445556 6788999999987 8999
Q ss_pred HHHHHHhc--c-CcEEEe--cchhhHHHHHhhCcccccc--ceeeeccccc--cceeEEEEcC-----------cCChhh
Q 006590 480 AVASSLCQ--M-GIKVAT--ICKDDYEKLKLRIPVEAQH--NLVLSTSYAA--HKTKIWLVGD-----------DLTGKE 539 (639)
Q Consensus 480 ava~~L~~--~-~~~v~~--~~~~~~~~l~~~~~~~~~~--~l~~~~~~~~--~~~~vwivg~-----------~~~~~~ 539 (639)
.-++++|+ . -.+|.+ |++++.+++.+++...... ...-+.+.++ ++++|++.-. .++.+
T Consensus 169 ~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s~~~~~s~~Pv~~~~- 247 (379)
T PRK06199 169 TILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSGETGDPSTYPYVKRE- 247 (379)
T ss_pred HHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCCCCCCCCcCcEecHH-
Confidence 99999984 3 346666 9999999998887654321 2223345664 8888877322 23344
Q ss_pred hhcCCCCceeecccc--cCCcCCCCC-ceeecC
Q 006590 540 QARAPKGTIFIPYTQ--IPPRKLRKD-CFYHST 569 (639)
Q Consensus 540 q~~a~~G~~f~~~~~--~~~~~~R~d-c~y~~~ 569 (639)
+.++|+|+.-... +|+.-+++| ..|-+.
T Consensus 248 --~lkpG~hv~~ig~~eld~~~l~~~a~vvvD~ 278 (379)
T PRK06199 248 --WVKPGAFLLMPAACRIDEGMEQGDVRKVVDN 278 (379)
T ss_pred --HcCCCcEEecCCcccCCHHHHhCCCcEEEcC
Confidence 4489999875432 555555553 444443
No 85
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.038 Score=55.52 Aligned_cols=41 Identities=17% Similarity=0.313 Sum_probs=36.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++
T Consensus 2 ~~vlItGas~--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATS--GIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence 5689999998 9999999999999999988 888888888665
No 86
>PRK06500 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.063 Score=53.52 Aligned_cols=44 Identities=16% Similarity=0.190 Sum_probs=38.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++++
T Consensus 6 ~k~vlItGasg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK06500 6 GKTALITGGTS--GIGLETARQFLAEGARVAITGRDPASLEAARAELG 51 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC
Confidence 35799999998 9999999999999999988 77788887777654
No 87
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.89 E-value=0.057 Score=54.62 Aligned_cols=43 Identities=16% Similarity=0.249 Sum_probs=37.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 12 ~k~ilItGa~g--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i 56 (259)
T PRK08213 12 GKTALVTGGSR--GLGLQIAEALGEAGARVVLSARKAEELEEAAAHL 56 (259)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8888877776654
No 88
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.88 E-value=0.11 Score=55.20 Aligned_cols=126 Identities=13% Similarity=0.124 Sum_probs=76.0
Q ss_pred chhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHh-----cCcCCC
Q 006590 389 PWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVN-----SLPKTT 463 (639)
Q Consensus 389 ~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~-----~ip~~~ 463 (639)
|.-.....+.+.+++..|.. .|++|. +| +|.++..+. +-..= |...+++ .++-..
T Consensus 100 Plp~~i~~~~~ld~I~~aKD-------Vdg~n~---~n-~G~l~~~~~---~~~p~------T~~gii~~L~~~~i~l~G 159 (283)
T PRK14192 100 PVPAQIDERACFDAISLAKD-------VDGVTC---LG-FGRMAMGEA---AYGSA------TPAGIMRLLKAYNIELAG 159 (283)
T ss_pred CCccccCHHHHHhccCHHHh-------cCCCCc---cc-cCccccCCC---cccCC------cHHHHHHHHHHcCCCCCC
Confidence 33333444456677754444 356676 55 555554332 22222 3344444 345567
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccccceeEEEEc----CcCChhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVG----DDLTGKE 539 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg----~~~~~~~ 539 (639)
++|+++|+.| -+|+++|..|.++|..|++-+. +-++|++.+ ++++++|.. +.++++.
T Consensus 160 k~vvViG~gg--~vGkpia~~L~~~gatVtv~~~-~t~~L~~~~----------------~~aDIvI~AtG~~~~v~~~~ 220 (283)
T PRK14192 160 KHAVVVGRSA--ILGKPMAMMLLNANATVTICHS-RTQNLPELV----------------KQADIIVGAVGKPELIKKDW 220 (283)
T ss_pred CEEEEECCcH--HHHHHHHHHHHhCCCEEEEEeC-CchhHHHHh----------------ccCCEEEEccCCCCcCCHHH
Confidence 7999999997 8999999999999999998211 223333332 245565522 2455555
Q ss_pred hhcCCCCceeecccccCC
Q 006590 540 QARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 540 q~~a~~G~~f~~~~~~~~ 557 (639)
. ++|++++|+. ..|
T Consensus 221 l---k~gavViDvg-~n~ 234 (283)
T PRK14192 221 I---KQGAVVVDAG-FHP 234 (283)
T ss_pred c---CCCCEEEEEE-Eee
Confidence 4 8999999998 555
No 89
>PRK07774 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.06 Score=53.85 Aligned_cols=43 Identities=21% Similarity=0.338 Sum_probs=36.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+++..+++++++
T Consensus 6 ~k~vlItGasg--~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 50 (250)
T PRK07774 6 DKVAIVTGAAG--GIGQAYAEALAREGASVVVADINAEGAERVAKQI 50 (250)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 7777777776654
No 90
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=94.87 E-value=0.13 Score=55.76 Aligned_cols=157 Identities=15% Similarity=0.123 Sum_probs=104.1
Q ss_pred HcCCcEEEeccccc-ccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhh
Q 006590 408 AKGVKVISLGLLNQ-GEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 477 (639)
Q Consensus 408 k~G~kv~~LG~ln~-~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~ki 477 (639)
-.|+|+++ |-... ...|..--++.+--.|+ +..+-+.||+.+|+ |++.+-+ |++.+.+.++|+- ..
T Consensus 66 ~~gvK~v~-~~p~N~~~glp~v~g~~~L~d~~TG~plal~d~~~lTa~RTaAasavAa~~LA~~da~~laiIGaG---~q 141 (330)
T COG2423 66 VAGVKIVG-VHPDNPARGLPTVSGVIVLFDAETGEPLALLDATRLTALRTAAASAVAAKYLARKDASTLAIIGAG---AQ 141 (330)
T ss_pred eEEEEEec-CcCCccccCCCcceEEEEEEecCCCCEEEEecCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HH
Confidence 35666666 22221 13444444555555555 45599999999985 3444544 6689999999997 89
Q ss_pred HHHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEE-----EcCcCChhhhhcCCCC
Q 006590 478 ANAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL-----VGDDLTGKEQARAPKG 546 (639)
Q Consensus 478 g~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi-----vg~~~~~~~q~~a~~G 546 (639)
|+.-+++++ +...++.+ |+++.-+++.+.+..........+.+.++ ..++|++ -.-.++.+.+ +||
T Consensus 142 A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pil~~~~l---~~G 218 (330)
T COG2423 142 ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWL---KPG 218 (330)
T ss_pred HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCeecHhhc---CCC
Confidence 999999999 55556666 99999998887766665544234555554 6777776 2234455555 799
Q ss_pred ceeecccc-------cCCc-CCCCCceeecCCc
Q 006590 547 TIFIPYTQ-------IPPR-KLRKDCFYHSTPA 571 (639)
Q Consensus 547 ~~f~~~~~-------~~~~-~~R~dc~y~~~~a 571 (639)
+|+.-+.. ++++ -.|-||.+-+.+.
T Consensus 219 ~hI~aiGad~p~k~Eld~e~l~ra~~vvvD~~~ 251 (330)
T COG2423 219 THINAIGADAPGKRELDPEVLARADRVVVDSLE 251 (330)
T ss_pred cEEEecCCCCcccccCCHHHHHhcCeEEEcCHH
Confidence 99998874 4444 3345576665554
No 91
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=94.85 E-value=0.067 Score=54.36 Aligned_cols=43 Identities=19% Similarity=0.281 Sum_probs=38.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++.
T Consensus 5 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~ 49 (262)
T TIGR03325 5 GEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH 49 (262)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc
Confidence 46899999998 9999999999999999998 8888888887653
No 92
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.83 E-value=0.064 Score=54.04 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=37.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.++++++
T Consensus 2 ~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 45 (248)
T PRK10538 2 IVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDELG 45 (248)
T ss_pred EEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 589999998 9999999999999999998 88888888877653
No 93
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.82 E-value=0.053 Score=54.68 Aligned_cols=38 Identities=24% Similarity=0.269 Sum_probs=35.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (639)
.|+|+|||| .||+++|+.|.++|.+|.. |+.++...+.
T Consensus 2 ~ilV~GatG--~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~ 41 (275)
T COG0702 2 KILVTGATG--FVGGAVVRELLARGHEVRAAVRNPEAAAALA 41 (275)
T ss_pred eEEEEeccc--chHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence 689999999 9999999999999999999 9999999887
No 94
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.76 E-value=0.054 Score=55.08 Aligned_cols=43 Identities=14% Similarity=0.301 Sum_probs=35.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
.+.|+++|+++ -||+++|+.|+++|.+|.+ +++++.+++.+++
T Consensus 8 ~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 53 (260)
T PRK08416 8 GKTLVISGGTR--GIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDL 53 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 46899999997 9999999999999999987 4566777666554
No 95
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.75 E-value=0.063 Score=53.82 Aligned_cols=42 Identities=19% Similarity=0.318 Sum_probs=36.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
++|+++|++| -||+++++.|+++|.+|++ |+.++.+++.+++
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l 44 (254)
T TIGR02415 1 KVALVTGGAQ--GIGKGIAERLAKDGFAVAVADLNEETAKETAKEI 44 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4689999998 9999999999999999988 7777777666554
No 96
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.75 E-value=0.062 Score=53.42 Aligned_cols=43 Identities=26% Similarity=0.366 Sum_probs=36.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 6 ~~~ilItGasg--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (251)
T PRK12826 6 GRVALVTGAAR--GIGRAIAVRLAADGAEVIVVDICGDDAAATAELV 50 (251)
T ss_pred CCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35799999998 9999999999999999988 7777776666554
No 97
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=94.72 E-value=0.044 Score=58.25 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=27.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
++|+|+||+| =||+++++.|.++|.+|..
T Consensus 1 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~ 29 (343)
T TIGR01472 1 KIALITGITG--QDGSYLAEFLLEKGYEVHG 29 (343)
T ss_pred CeEEEEcCCC--cHHHHHHHHHHHCCCEEEE
Confidence 4799999999 9999999999999999997
No 98
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.70 E-value=0.06 Score=53.89 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=36.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
++|+++|++| -||+++|+.|+++|.+|++ |++++.+.+.+++
T Consensus 2 ~~vlItGas~--giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 45 (243)
T PRK07102 2 KKILIIGATS--DIARACARRYAAAGARLYLAARDVERLERLADDL 45 (243)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence 4799999998 9999999999999999988 8887777665553
No 99
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.69 E-value=0.069 Score=54.35 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=40.5
Q ss_pred cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 458 ~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+...+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 5 ~~~~~~k~~lItGa~~--~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~ 55 (265)
T PRK07097 5 LFSLKGKIALITGASY--GIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYR 55 (265)
T ss_pred ccCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence 3344567899999998 9999999999999999988 78788877766643
No 100
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.66 E-value=0.066 Score=52.86 Aligned_cols=42 Identities=24% Similarity=0.313 Sum_probs=36.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| .||+.+|+.|.++|.+|.+ |++++.+.+.+++
T Consensus 6 ~~ilItGasg--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 49 (246)
T PRK05653 6 KTALVTGASR--GIGRAIALRLAADGAKVVIYDSNEEAAEALAAEL 49 (246)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Confidence 5799999998 9999999999999999888 8877777665553
No 101
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.63 E-value=0.078 Score=53.06 Aligned_cols=43 Identities=21% Similarity=0.337 Sum_probs=37.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++++++.
T Consensus 3 k~vlItGas~--giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (248)
T PRK08251 3 QKILITGASS--GLGAGMAREFAAKGRDLALCARRTDRLEELKAELL 47 (248)
T ss_pred CEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 88888888876644
No 102
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.61 E-value=0.09 Score=56.17 Aligned_cols=48 Identities=15% Similarity=0.078 Sum_probs=37.5
Q ss_pred hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 457 ~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
++......+|+|+|++| -||+.+|+.|.++|.+|.. |+.++.+.+.++
T Consensus 4 ~~~~~~~~~vLVtG~~G--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~ 53 (353)
T PLN02896 4 EGRESATGTYCVTGATG--YIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSK 53 (353)
T ss_pred cccccCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh
Confidence 34444567899999999 9999999999999999987 666555554444
No 103
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.60 E-value=0.064 Score=56.31 Aligned_cols=38 Identities=21% Similarity=0.136 Sum_probs=32.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l 503 (639)
+.|+|+|++| -||+++++.|.++|.+|.. |+.++.+++
T Consensus 6 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 45 (322)
T PLN02986 6 KLVCVTGASG--YIASWIVKLLLLRGYTVKATVRDLTDRKKT 45 (322)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCCcchHHH
Confidence 6899999999 9999999999999999975 666554443
No 104
>PRK07063 short chain dehydrogenase; Provisional
Probab=94.58 E-value=0.044 Score=55.48 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=39.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++..
T Consensus 7 ~k~vlVtGas~--gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~ 53 (260)
T PRK07063 7 GKVALVTGAAQ--GIGAAIARAFAREGAAVALADLDAALAERAAAAIAR 53 (260)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46799999998 9999999999999999988 888888888777543
No 105
>PRK07825 short chain dehydrogenase; Provisional
Probab=94.57 E-value=0.051 Score=55.46 Aligned_cols=44 Identities=18% Similarity=0.215 Sum_probs=38.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| .||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 5 ~~~ilVtGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (273)
T PRK07825 5 GKVVAITGGAR--GIGLATARALAALGARVAIGDLDEALAKETAAELG 50 (273)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 35799999998 9999999999999999988 88888888777654
No 106
>PRK07677 short chain dehydrogenase; Provisional
Probab=94.52 E-value=0.074 Score=53.62 Aligned_cols=43 Identities=26% Similarity=0.392 Sum_probs=37.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 2 k~~lItG~s~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~ 46 (252)
T PRK07677 2 KVVIITGGSS--GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIE 46 (252)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 88888888776653
No 107
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.51 E-value=0.053 Score=58.30 Aligned_cols=53 Identities=19% Similarity=0.203 Sum_probs=44.7
Q ss_pred HHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 455 v~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
+.+.++-..+.++++|+|+ -||+++|+.|+++|.+|.| ||.++-++.++++..
T Consensus 27 ~~~~~~~~~~~~vVTGans--GIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~ 81 (314)
T KOG1208|consen 27 VTHGIDLSGKVALVTGATS--GIGFETARELALRGAHVVLACRNEERGEEAKEQIQK 81 (314)
T ss_pred eeccccCCCcEEEEECCCC--chHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3444454557899999996 9999999999999999999 999898888888665
No 108
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.51 E-value=0.071 Score=49.89 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=34.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cc--hhhHHHHHhhCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--IC--KDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~--~~~~~~l~~~~~ 508 (639)
|.|+++|+++ -||+++|+.|+++ +.+|.+ |+ .++.+++.++++
T Consensus 1 k~~lItGa~~--giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~ 48 (167)
T PF00106_consen 1 KTVLITGASS--GIGRALARALARRGARVVILTSRSEDSEGAQELIQELK 48 (167)
T ss_dssp EEEEEETTTS--HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCC--HHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence 5789999997 9999999999988 556566 77 677887776655
No 109
>PRK09072 short chain dehydrogenase; Provisional
Probab=94.50 E-value=0.085 Score=53.53 Aligned_cols=43 Identities=26% Similarity=0.394 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++++++
T Consensus 5 ~~~vlItG~s~--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (263)
T PRK09072 5 DKRVLLTGASG--GIGQALAEALAAAGARLLLVGRNAEKLEALAARL 49 (263)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 8888888888775
No 110
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.50 E-value=0.065 Score=53.67 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=32.5
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhh
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLR 506 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~--~~~~~l~~~ 506 (639)
|+|+|||| ++|+.|+++|.+++.+|.. |+. ++.++|++.
T Consensus 1 I~V~GatG--~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~ 43 (233)
T PF05368_consen 1 ILVTGATG--NQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL 43 (233)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT
T ss_pred CEEECCcc--HHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc
Confidence 78999999 9999999999999999888 653 456666654
No 111
>PRK05854 short chain dehydrogenase; Provisional
Probab=94.49 E-value=0.047 Score=57.70 Aligned_cols=44 Identities=16% Similarity=0.150 Sum_probs=38.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.++++|+++ -||+++|+.|+++|.+|.+ |+.++.++..+++.
T Consensus 14 gk~~lITGas~--GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~ 59 (313)
T PRK05854 14 GKRAVVTGASD--GLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIR 59 (313)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999997 9999999999999999998 88888887766653
No 112
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.48 E-value=0.088 Score=52.04 Aligned_cols=43 Identities=23% Similarity=0.315 Sum_probs=33.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh-hHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD-DYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~-~~~~l~~~~ 507 (639)
.+.|+++|++| .||+++|+.|+++|.+|.+ ++.+ +.+++.+++
T Consensus 5 ~~~vlItG~sg--~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 50 (248)
T PRK05557 5 GKVALVTGASR--GIGRAIAERLAAQGANVVINYASSEAGAEALVAEI 50 (248)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 46899999998 9999999999999999966 4333 455554443
No 113
>PRK12939 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.084 Score=52.58 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=37.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 7 ~~~vlItGa~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (250)
T PRK12939 7 GKRALVTGAAR--GLGAAFAEALAEAGATVAFNDGLAAEARELAAAL 51 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 47899999998 9999999999999999888 7777777776654
No 114
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.46 E-value=0.08 Score=54.81 Aligned_cols=44 Identities=11% Similarity=0.203 Sum_probs=37.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 6 ~k~vlVTGas~--gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~ 51 (275)
T PRK05876 6 GRGAVITGGAS--GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR 51 (275)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35799999997 9999999999999999998 88888887766653
No 115
>PRK07024 short chain dehydrogenase; Provisional
Probab=94.46 E-value=0.063 Score=54.38 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=38.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.++++++++.
T Consensus 3 ~~vlItGas~--gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~ 48 (257)
T PRK07024 3 LKVFITGASS--GIGQALAREYARQGATLGLVARRTDALQAFAARLPK 48 (257)
T ss_pred CEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc
Confidence 5799999998 9999999999999999998 888888888777643
No 116
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=94.45 E-value=0.08 Score=52.98 Aligned_cols=42 Identities=19% Similarity=0.133 Sum_probs=34.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 3 k~ilItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 47 (248)
T PRK06947 3 KVVLITGASR--GIGRATAVLAAARGWSVGINYARDAAAAEETADAV 47 (248)
T ss_pred cEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 5799999998 9999999999999999876 5666666665554
No 117
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.42 E-value=0.086 Score=55.58 Aligned_cols=44 Identities=18% Similarity=0.183 Sum_probs=38.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 6 ~k~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~ 51 (322)
T PRK07453 6 KGTVIITGASS--GVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELG 51 (322)
T ss_pred CCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence 46799999998 9999999999999999988 88888888877753
No 118
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.39 E-value=0.14 Score=48.91 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=51.5
Q ss_pred cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc--cceeEEE--Ec
Q 006590 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG 532 (639)
Q Consensus 458 ~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg 532 (639)
+++-..++|.++|.+. .+|+.+|..|.++|..|++ .++. .++++ +.+||+| +|
T Consensus 23 ~~~~~gk~v~VvGrs~--~vG~pla~lL~~~gatV~~~~~~t--------------------~~l~~~v~~ADIVvsAtg 80 (140)
T cd05212 23 GVRLDGKKVLVVGRSG--IVGAPLQCLLQRDGATVYSCDWKT--------------------IQLQSKVHDADVVVVGSP 80 (140)
T ss_pred CCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeCCCC--------------------cCHHHHHhhCCEEEEecC
Confidence 4455788999999998 9999999999999999999 2111 01221 4566655 33
Q ss_pred --CcCChhhhhcCCCCceeeccc
Q 006590 533 --DDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 533 --~~~~~~~q~~a~~G~~f~~~~ 553 (639)
..++++.. ++|++++|+.
T Consensus 81 ~~~~i~~~~i---kpGa~Vidvg 100 (140)
T cd05212 81 KPEKVPTEWI---KPGATVINCS 100 (140)
T ss_pred CCCccCHHHc---CCCCEEEEcC
Confidence 33555555 9999999887
No 119
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.39 E-value=0.087 Score=52.94 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=37.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 ~~~vlItGasg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (262)
T PRK13394 7 GKTAVVTGAAS--GIGKEIALELARAGAAVAIADLNQDGANAVADEI 51 (262)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8887777776664
No 120
>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1. UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].
Probab=94.38 E-value=0.11 Score=51.63 Aligned_cols=55 Identities=18% Similarity=0.356 Sum_probs=39.9
Q ss_pred HHHHhhccCCceecccc--cccccCCcccccCCchhhhhhhcC-CCCCcCCCchhhhhhcCCC
Q 006590 215 DFMNNMGHCNFEFIPMW--LFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTI 274 (639)
Q Consensus 215 ~~~~~~~Hsg~e~~P~~--~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT~ 274 (639)
....-+.|.... .|.+ +.+..+ ++.+|++|..||.. +++|||...++|+.+....
T Consensus 99 nq~HkWsH~~~~-~P~~V~~LQ~~g----illsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~~ 156 (178)
T PF10520_consen 99 NQFHKWSHTYKS-LPPWVRFLQDAG----ILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDKI 156 (178)
T ss_pred HHHHHHHcCCCC-CCHHHHHHHHCC----cccCchhhhccccCcccCCeEeecccchHHHHHh
Confidence 344567788655 4654 122223 45689999999999 8999999999999887653
No 121
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=94.37 E-value=0.17 Score=56.66 Aligned_cols=138 Identities=14% Similarity=0.139 Sum_probs=86.5
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEE--Ec-
Q 006590 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG- 532 (639)
Q Consensus 460 p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg- 532 (639)
....++|+|+|. | .||+.+|+.|...|.+|++ +++.+....... +. .+.++++ ..++++| .|
T Consensus 209 ~l~Gk~VlViG~-G--~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~---G~-----~v~~l~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 209 LIAGKVVVVAGY-G--DVGKGCAQRLRGLGARVIVTEVDPICALQAAMD---GF-----RVMTMEEAAELGDIFVTATGN 277 (425)
T ss_pred CCCCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc---CC-----EecCHHHHHhCCCEEEECCCC
Confidence 335678999997 5 9999999999999999999 444443222111 11 1223332 5667766 33
Q ss_pred -CcCChhhhhcCCCCceeecccccCCc--------------CCCCCceeecCCc---cc--cCCCCccccccccccCcch
Q 006590 533 -DDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---MI--IPPSLSNMHSCENWLGRRV 592 (639)
Q Consensus 533 -~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~~--~P~~~~~~~~~e~~~p~~~ 592 (639)
+.++.+....+++|++++-+..++.+ +.|+.+.-.+.|. +. --+..-|+- |..+.|..+
T Consensus 278 ~~vI~~~~~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl~-~~~ghp~~v 356 (425)
T PRK05476 278 KDVITAEHMEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNLG-AATGHPSEV 356 (425)
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCcccccC-CCCCCccee
Confidence 35777888899999999998876542 2233333111111 11 112355676 899999999
Q ss_pred hHHHHHhhhhhhhcCCC
Q 006590 593 MSAWRIAGIIHALEGWD 609 (639)
Q Consensus 593 ~~Ac~a~~~v~alEgw~ 609 (639)
|.-.+|.=.+-+++=|.
T Consensus 357 md~sfa~q~l~~~~l~~ 373 (425)
T PRK05476 357 MDMSFANQALAQIELFT 373 (425)
T ss_pred eCHHHHHHHHHHHHHHh
Confidence 97766655555555554
No 122
>PRK06172 short chain dehydrogenase; Provisional
Probab=94.36 E-value=0.086 Score=53.01 Aligned_cols=43 Identities=21% Similarity=0.170 Sum_probs=37.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 7 ~k~ilItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (253)
T PRK06172 7 GKVALVTGGAA--GIGRATALAFAREGAKVVVADRDAAGGEETVALI 51 (253)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8888877766654
No 123
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.36 E-value=0.089 Score=52.82 Aligned_cols=42 Identities=24% Similarity=0.237 Sum_probs=35.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 ~~ilItGasg--~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~ 51 (254)
T PRK12746 7 KVALVTGASR--GIGRAIAMRLANDGALVAIHYGRNKQAADETIREI 51 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 6899999998 9999999999999999965 6777776665554
No 124
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.35 E-value=0.099 Score=52.22 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=37.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.++++|++| .||+++|+.|.++|.+|.+ |+.++.+..++++.
T Consensus 5 ~k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (252)
T PRK06138 5 GRVAIVTGAGS--GIGRATAKLFAREGARVVVADRDAEAAERVAAAIA 50 (252)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh
Confidence 46899999998 9999999999999999988 88887777666643
No 125
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.35 E-value=0.084 Score=53.29 Aligned_cols=42 Identities=17% Similarity=0.244 Sum_probs=36.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 3 k~ilItG~~~--~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 46 (259)
T PRK12384 3 QVAVVIGGGQ--TLGAFLCHGLAEEGYRVAVADINSEKAANVAQEI 46 (259)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 7777777776654
No 126
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.35 E-value=0.095 Score=53.04 Aligned_cols=44 Identities=14% Similarity=0.220 Sum_probs=35.8
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
...+.|+++|++| -||+++|+.|+++|.+|.+ |+ ++.+++++++
T Consensus 13 l~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~ 58 (258)
T PRK06935 13 LDGKVAIVTGGNT--GLGQGYAVALAKAGADIIITTHG-TNWDETRRLI 58 (258)
T ss_pred CCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH
Confidence 3457899999998 9999999999999999988 55 5556665553
No 127
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.33 E-value=0.097 Score=52.76 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=37.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 3 k~ilItGat~--~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (257)
T PRK07074 3 RTALVTGAAG--GIGQALARRFLAAGDRVLALDIDAAALAAFADALG 47 (257)
T ss_pred CEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999988 88888887777653
No 128
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.33 E-value=0.083 Score=54.08 Aligned_cols=44 Identities=23% Similarity=0.256 Sum_probs=38.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 10 ~k~vlVtGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 55 (278)
T PRK08277 10 GKVAVITGGGG--VLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK 55 (278)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 88888887777653
No 129
>PRK08589 short chain dehydrogenase; Validated
Probab=94.32 E-value=0.078 Score=54.44 Aligned_cols=43 Identities=23% Similarity=0.278 Sum_probs=36.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+ ++.+++.+++.
T Consensus 6 ~k~vlItGas~--gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~ 50 (272)
T PRK08589 6 NKVAVITGAST--GIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIK 50 (272)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHH
Confidence 46799999998 9999999999999999998 66 77777666653
No 130
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.32 E-value=0.054 Score=54.95 Aligned_cols=42 Identities=21% Similarity=0.286 Sum_probs=37.4
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 2 ~vlItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 45 (259)
T PRK08340 2 NVLVTASSR--GIGFNVARELLKKGARVVISSRNEENLEKALKELK 45 (259)
T ss_pred eEEEEcCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 689999998 9999999999999999998 88888888777754
No 131
>PRK07831 short chain dehydrogenase; Provisional
Probab=94.29 E-value=0.087 Score=53.46 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=37.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| +-||+++|+.|+++|.+|.+ |+.++++...+++.
T Consensus 17 ~k~vlItG~sg-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~ 63 (262)
T PRK07831 17 GKVVLVTAAAG-TGIGSATARRALEEGARVVISDIHERRLGETADELA 63 (262)
T ss_pred CCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999996 35999999999999999998 77777776665543
No 132
>PRK05993 short chain dehydrogenase; Provisional
Probab=94.28 E-value=0.064 Score=55.25 Aligned_cols=42 Identities=19% Similarity=0.265 Sum_probs=37.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++.++++
T Consensus 4 ~k~vlItGasg--giG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~ 47 (277)
T PRK05993 4 KRSILITGCSS--GIGAYCARALQSDGWRVFATCRKEEDVAALEAE 47 (277)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC
Confidence 35799999998 9999999999999999998 888888888754
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=94.22 E-value=0.13 Score=58.79 Aligned_cols=181 Identities=15% Similarity=0.154 Sum_probs=105.4
Q ss_pred HHHcCCcEEEecccc------------cccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccC
Q 006590 406 ADAKGVKVISLGLLN------------QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 473 (639)
Q Consensus 406 A~k~G~kv~~LG~ln------------~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~~~~~V~~~Gatg 473 (639)
..++|+.++++=.+. ++-++.|+..+..+-| .|.-++ +|.+-++. .+| .++|+|.|+-
T Consensus 104 l~~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~--~lgr~~-~g~~taag----~vp--~akVlViGaG- 173 (511)
T TIGR00561 104 LAAKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAH--EFGRFF-TGQITAAG----KVP--PAKVLVIGAG- 173 (511)
T ss_pred HHHcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHH--Hhhhhc-CCceecCC----CCC--CCEEEEECCC-
Confidence 356778888766443 3345555554444433 033333 45544332 344 4899999984
Q ss_pred chhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc------------ccceeeec-c--------ccc--cceeE
Q 006590 474 ANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA------------QHNLVLST-S--------YAA--HKTKI 528 (639)
Q Consensus 474 ~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~------------~~~l~~~~-~--------~~~--~~~~v 528 (639)
-+|.+.+..+...|.+|.. ++.++++..++ ++.+. ..+-...+ . +.+ +.+||
T Consensus 174 --~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DI 250 (511)
T TIGR00561 174 --VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDI 250 (511)
T ss_pred --HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCE
Confidence 8999999999999998887 77778776664 33322 01100011 1 111 55677
Q ss_pred EE--E---cC----cCChhhhhcCCCCceeecccccCCc----CCCCCceeecCCccccCCCCccccccccccCcc---h
Q 006590 529 WL--V---GD----DLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR---V 592 (639)
Q Consensus 529 wi--v---g~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~---~ 592 (639)
+| + |+ .+++++.+.+++|.+++|++ .++- -.|.|.+|.+. +.+. +.|--.+|.+ +
T Consensus 251 VI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA-~d~GGn~E~t~p~~~~~~~------~GV~--~~gv~nlPs~~p~~ 321 (511)
T TIGR00561 251 IITTALIPGKPAPKLITEEMVDSMKAGSVIVDLA-AEQGGNCEYTKPGEVYTTE------NQVK--VIGYTDLPSRLPTQ 321 (511)
T ss_pred EEECcccCCCCCCeeehHHHHhhCCCCCEEEEee-eCCCCCEEEecCceEEEec------CCEE--EEeeCCccccCHHH
Confidence 66 3 43 38999999999999999999 6654 22333333221 1122 2355666665 3
Q ss_pred hHHHHHhhhhhhhcCC
Q 006590 593 MSAWRIAGIIHALEGW 608 (639)
Q Consensus 593 ~~Ac~a~~~v~alEgw 608 (639)
.+--.+..++.-||.-
T Consensus 322 AS~l~s~nl~~~l~~l 337 (511)
T TIGR00561 322 SSQLYGTNLVNLLKLL 337 (511)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3335556665555543
No 134
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.21 E-value=0.067 Score=53.56 Aligned_cols=41 Identities=27% Similarity=0.348 Sum_probs=36.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 2 ~vlItGas~--giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~ 44 (223)
T PRK05884 2 EVLVTGGDT--DLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL 44 (223)
T ss_pred eEEEEeCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 589999998 9999999999999999988 8888888887665
No 135
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.21 E-value=0.15 Score=53.77 Aligned_cols=125 Identities=13% Similarity=0.049 Sum_probs=77.1
Q ss_pred ecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec
Q 006590 445 VDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST 519 (639)
Q Consensus 445 v~Gnsltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~ 519 (639)
|||.-...+.--+.+ +...++|+|+||- -.|||++.+|.+.|+ ++++ |+.+|.++|.++...... .....
T Consensus 105 TD~~G~~~~l~~~~~~~~~~~k~vlvlGaG---Gaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~--~~~~~ 179 (282)
T TIGR01809 105 TDWDGIAGALANIGKFEPLAGFRGLVIGAG---GTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGV--ITRLE 179 (282)
T ss_pred CCHHHHHHHHHhhCCccccCCceEEEEcCc---HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCc--ceecc
Confidence 666666666543332 2245789999996 579999999999997 5777 999999999887543211 11111
Q ss_pred ---ccc-c-cceeEEE----EcCcCChhhhhc---------CCCCceeecccccCCc-----CCC-CCceeecCCcccc
Q 006590 520 ---SYA-A-HKTKIWL----VGDDLTGKEQAR---------APKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 574 (639)
Q Consensus 520 ---~~~-~-~~~~vwi----vg~~~~~~~q~~---------a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~ 574 (639)
.++ . .+++++| +|..++++++.. .+++..+.|..=-|.+ ..| +-|....+..|-+
T Consensus 180 ~~~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv 258 (282)
T TIGR01809 180 GDSGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWPTPLVAIVSAAGWRVISGLQMLL 258 (282)
T ss_pred chhhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCCCHHHHHHHHCCCEEECcHHHHH
Confidence 122 2 4567777 676666655421 2456677777732222 112 4466666666654
No 136
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.21 E-value=0.14 Score=54.45 Aligned_cols=168 Identities=17% Similarity=0.188 Sum_probs=89.7
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCC
Q 006590 383 IVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT 462 (639)
Q Consensus 383 ~~~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~~ 462 (639)
|+-=.+|.-.++ -+++.+.=..|++.| +.|-. ++.+|.+ .--| |||--...+.--..+...
T Consensus 63 G~nVTiP~K~~~-~~~~D~l~~~A~~iG-------AVNTv--~~~~g~l-~G~N--------TD~~Gf~~~l~~~~~~~~ 123 (288)
T PRK12749 63 GTGVSMPNKQLA-CEYVDELTPAAKLVG-------AINTI--VNDDGYL-RGYN--------TDGTGHIRAIKESGFDIK 123 (288)
T ss_pred EEEECcCCHHHH-HHHhccCCHHHHHhC-------ceeEE--EccCCEE-EEEe--------cCHHHHHHHHHhcCCCcC
Confidence 444556664333 333555555566655 44442 1233321 2223 566665555543344444
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cch---hhHHHHHhhCccccccceeeeccc------c-c-cceeE
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICK---DDYEKLKLRIPVEAQHNLVLSTSY------A-A-HKTKI 528 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~---~~~~~l~~~~~~~~~~~l~~~~~~------~-~-~~~~v 528 (639)
.++|+|.||-| . ||||+..|++.|+ ++++ |+. ++.++|.+++....... +.+.++ + + .++++
T Consensus 124 ~k~vlvlGaGG--a-arAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~-~~~~~~~~~~~l~~~~~~aDi 199 (288)
T PRK12749 124 GKTMVLLGAGG--A-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCV-VTVTDLADQQAFAEALASADI 199 (288)
T ss_pred CCEEEEECCcH--H-HHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCce-EEEechhhhhhhhhhcccCCE
Confidence 56899999987 3 8999999998887 5666 763 58888887765433221 112222 2 2 45677
Q ss_pred EE----EcCcC--C---hhhhhcCCCCceeecccccCCc------CCC-CCceeecCCcccc
Q 006590 529 WL----VGDDL--T---GKEQARAPKGTIFIPYTQIPPR------KLR-KDCFYHSTPAMII 574 (639)
Q Consensus 529 wi----vg~~~--~---~~~q~~a~~G~~f~~~~~~~~~------~~R-~dc~y~~~~a~~~ 574 (639)
+| +|-.= + +.+....+++..+.|+. ..|. +.| +-|....+..|-+
T Consensus 200 vINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v-Y~P~~T~ll~~A~~~G~~~~~Gl~ML~ 260 (288)
T PRK12749 200 LTNGTKVGMKPLENESLVNDISLLHPGLLVTECV-YNPHMTKLLQQAQQAGCKTIDGYGMLL 260 (288)
T ss_pred EEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEec-CCCccCHHHHHHHHCCCeEECCHHHHH
Confidence 77 33210 0 01222345677777776 3333 112 4566666655543
No 137
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.20 E-value=0.088 Score=53.32 Aligned_cols=45 Identities=20% Similarity=0.265 Sum_probs=38.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++..
T Consensus 7 ~k~vlItG~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 53 (259)
T PRK06125 7 GKRVLITGASK--GIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA 53 (259)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence 47899999997 9999999999999999988 888888887776543
No 138
>PRK05872 short chain dehydrogenase; Provisional
Probab=94.19 E-value=0.081 Score=55.27 Aligned_cols=46 Identities=17% Similarity=0.244 Sum_probs=40.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.++++.
T Consensus 8 ~gk~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~ 55 (296)
T PRK05872 8 AGKVVVVTGAAR--GIGAELARRLHARGAKLALVDLEEAELAALAAELGG 55 (296)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC
Confidence 356899999998 9999999999999999988 899999998888753
No 139
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.18 E-value=0.1 Score=52.05 Aligned_cols=43 Identities=21% Similarity=0.326 Sum_probs=36.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 3 ~~~ilItGas~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 47 (250)
T TIGR03206 3 DKTAIVTGGGG--GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI 47 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999988 7777777776654
No 140
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=94.16 E-value=0.072 Score=58.73 Aligned_cols=138 Identities=13% Similarity=0.093 Sum_probs=75.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhhCccccccceeeecccc--c-cceeEEE--EcC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL--VGD 533 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~-~~~~vwi--vg~ 533 (639)
...+|.++|||| -+|+.+.+.|.++ +.+++. ++++.-+.+...-+.-.+..+..+.+++ + +++|+++ +|.
T Consensus 37 ~~~kVaIvGATG--~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~ 114 (381)
T PLN02968 37 EKKRIFVLGASG--YTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH 114 (381)
T ss_pred cccEEEEECCCC--hHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence 456999999999 9999999999955 888777 3322222222221111111111122233 1 5677766 455
Q ss_pred cCChhhhhcCCCCceeecccccCCc-CCCCCceeecC--CccccCCCCccccccccccC---------cc-hhHH-HHHh
Q 006590 534 DLTGKEQARAPKGTIFIPYTQIPPR-KLRKDCFYHST--PAMIIPPSLSNMHSCENWLG---------RR-VMSA-WRIA 599 (639)
Q Consensus 534 ~~~~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~~~--~a~~~P~~~~~~~~~e~~~p---------~~-~~~A-c~a~ 599 (639)
..+.+--..+.+|..+||.| .. .+++|..|.+- -....|+-.+. +-+++| ++ +.-+ |.+-
T Consensus 115 ~~s~~i~~~~~~g~~VIDlS---s~fRl~~~~~y~~~y~~p~~~pe~~~~---~~yglpE~~r~~i~~~~iIAnPgC~~t 188 (381)
T PLN02968 115 GTTQEIIKALPKDLKIVDLS---ADFRLRDIAEYEEWYGHPHRAPELQKE---AVYGLTELQREEIKSARLVANPGCYPT 188 (381)
T ss_pred HHHHHHHHHHhCCCEEEEcC---chhccCCcccchhccCCCCCCcccchh---hhcccchhCHHHhcCCCEEECCCCHHH
Confidence 54444444456788888887 22 44456665554 22233432221 124443 22 2223 9999
Q ss_pred hhhhhhcC
Q 006590 600 GIIHALEG 607 (639)
Q Consensus 600 ~~v~alEg 607 (639)
+++++|--
T Consensus 189 ~~~laL~P 196 (381)
T PLN02968 189 GIQLPLVP 196 (381)
T ss_pred HHHHHHHH
Confidence 99987743
No 141
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.14 E-value=0.092 Score=54.89 Aligned_cols=44 Identities=20% Similarity=0.201 Sum_probs=36.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.++..+++
T Consensus 15 ~~k~vlItGas~--gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l 60 (306)
T PRK06197 15 SGRVAVVTGANT--GLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI 60 (306)
T ss_pred CCCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 457899999998 9999999999999999877 7777766554443
No 142
>PRK07814 short chain dehydrogenase; Provisional
Probab=94.14 E-value=0.11 Score=52.90 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=38.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 9 ~~~~vlItGasg--gIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 54 (263)
T PRK07814 9 DDQVAVVTGAGR--GLGAAIALAFAEAGADVLIAARTESQLDEVAEQI 54 (263)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 8888887776664
No 143
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.13 E-value=0.1 Score=53.34 Aligned_cols=41 Identities=17% Similarity=0.296 Sum_probs=35.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 2 ~vlVtGasg--gIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 44 (270)
T PRK05650 2 RVMITGAAS--GLGRAIALRWAREGWRLALADVNEEGGEETLKLL 44 (270)
T ss_pred EEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 689999998 9999999999999999988 7877777666554
No 144
>PRK05599 hypothetical protein; Provisional
Probab=94.12 E-value=0.09 Score=53.25 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=36.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.|+++|+++ -||+++|+.|++ |.+|.+ |++++++++.+++..
T Consensus 2 ~vlItGas~--GIG~aia~~l~~-g~~Vil~~r~~~~~~~~~~~l~~ 45 (246)
T PRK05599 2 SILILGGTS--DIAGEIATLLCH-GEDVVLAARRPEAAQGLASDLRQ 45 (246)
T ss_pred eEEEEeCcc--HHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHh
Confidence 589999997 999999999995 999999 899999988877643
No 145
>PRK09135 pteridine reductase; Provisional
Probab=94.11 E-value=0.1 Score=51.77 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=34.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+.+|+.|+++|.+|.+ | ++++.+.+++++
T Consensus 6 ~~~vlItGa~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK09135 6 AKVALITGGAR--RIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL 51 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 4 345566665443
No 146
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.10 E-value=0.11 Score=52.05 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=88.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEE--EcCcCChh
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDDLTGK 538 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~~~~~ 538 (639)
+|.++||+| ++|+.|+.-..+||.+|+- ||..+...+|.. .-.+..+...+++.+ ...+++| .|.+.+.+
T Consensus 2 KIaiIgAsG--~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~--~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASG--KAGSRILKEALKRGHEVTAIVRNASKLAARQGV--TILQKDIFDLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCc--hhHHHHHHHHHhCCCeeEEEEeChHhccccccc--eeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence 689999999 9999999999999999998 998887654222 011112112222221 3334444 44443222
Q ss_pred hh-----------------------------hcCCCCceeecccccCCc-------------CCC----CCceeecCCcc
Q 006590 539 EQ-----------------------------ARAPKGTIFIPYTQIPPR-------------KLR----KDCFYHSTPAM 572 (639)
Q Consensus 539 ~q-----------------------------~~a~~G~~f~~~~~~~~~-------------~~R----~dc~y~~~~a~ 572 (639)
|. .-+-+|+..+|.-+||.+ .+| -|-+|.+-+++
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~ 157 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAF 157 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHh
Confidence 22 123456777777777753 122 57789999999
Q ss_pred ccCCCCcc-cc------ccccccCcchhHHHHHhhhhhhhcCCC
Q 006590 573 IIPPSLSN-MH------SCENWLGRRVMSAWRIAGIIHALEGWD 609 (639)
Q Consensus 573 ~~P~~~~~-~~------~~e~~~p~~~~~Ac~a~~~v~alEgw~ 609 (639)
-.|+.=.| +. -.|-.=..|..+|=-|.+|+-++|.=.
T Consensus 158 f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~ 201 (211)
T COG2910 158 FEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ 201 (211)
T ss_pred cCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc
Confidence 99974111 00 022223467788899999999999743
No 147
>PRK08017 oxidoreductase; Provisional
Probab=94.10 E-value=0.074 Score=53.37 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=35.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++.+.+++
T Consensus 3 k~vlVtGasg--~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~ 44 (256)
T PRK08017 3 KSVLITGCSS--GIGLEAALELKRRGYRVLAACRKPDDVARMNS 44 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh
Confidence 5799999998 9999999999999999988 88888776654
No 148
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.09 E-value=0.12 Score=51.54 Aligned_cols=43 Identities=19% Similarity=0.339 Sum_probs=36.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 7 ~~~vlVtG~sg--~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~ 51 (239)
T PRK07666 7 GKNALITGAGR--GIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV 51 (239)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 36799999998 9999999999999999988 8877777766554
No 149
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.07 E-value=0.068 Score=56.97 Aligned_cols=78 Identities=14% Similarity=0.193 Sum_probs=48.8
Q ss_pred EEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccccccee-EEEEcCcCChhhhh
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTK-IWLVGDDLTGKEQA 541 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-vwivg~~~~~~~q~ 541 (639)
|+++||+| +||+.+|+.|++.+. ++.+ +++..+-.+++++....... ++ ..+ +-++||.-+.+...
T Consensus 1 VLVTGa~G--SIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~-----~v---~~~~~~vigDvrd~~~l~ 70 (293)
T PF02719_consen 1 VLVTGAGG--SIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDP-----KV---RFEIVPVIGDVRDKERLN 70 (293)
T ss_dssp EEEETTTS--HHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--T-----TC---EEEEE--CTSCCHHHHHH
T ss_pred CEEEcccc--HHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhccccc-----Cc---ccccCceeecccCHHHHH
Confidence 78999999 999999999998886 4555 88889999999975443221 01 112 35678887777654
Q ss_pred cC----CCCceeeccc
Q 006590 542 RA----PKGTIFIPYT 553 (639)
Q Consensus 542 ~a----~~G~~f~~~~ 553 (639)
.+ .+-.+||--+
T Consensus 71 ~~~~~~~pdiVfHaAA 86 (293)
T PF02719_consen 71 RIFEEYKPDIVFHAAA 86 (293)
T ss_dssp HHTT--T-SEEEE---
T ss_pred HHHhhcCCCEEEEChh
Confidence 44 4555555444
No 150
>PRK07062 short chain dehydrogenase; Provisional
Probab=94.05 E-value=0.067 Score=54.28 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=39.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
..+.++++|++| -||+++|+.|+++|.+|.+ |+.++++++.+++..
T Consensus 7 ~~k~~lItGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 54 (265)
T PRK07062 7 EGRVAVVTGGSS--GIGLATVELLLEAGASVAICGRDEERLASAEARLRE 54 (265)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh
Confidence 356899999997 9999999999999999988 888888877766543
No 151
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.00 E-value=0.069 Score=56.65 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=37.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++||++ =||.++|..|+++|.++.+ |..+|++++++++
T Consensus 12 ~kvVvITGASs--GIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l 56 (282)
T KOG1205|consen 12 GKVVLITGASS--GIGEALAYELAKRGAKLVLVARRARRLERVAEEL 56 (282)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHH
Confidence 56789999995 9999999999999999777 8888888886663
No 152
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.00 E-value=0.22 Score=52.81 Aligned_cols=63 Identities=22% Similarity=0.168 Sum_probs=46.1
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc
Q 006590 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE 510 (639)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~ 510 (639)
|||.-...+.--+..+...++|++.||-| .|||++-+|++.|+ ++.+ |+.+|-++|.+++...
T Consensus 109 TD~~Gf~~~L~~~~~~~~~k~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~ 174 (283)
T PRK14027 109 TDVSGFGRGMEEGLPNAKLDSVVQVGAGG---VGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA 174 (283)
T ss_pred CCHHHHHHHHHhcCcCcCCCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence 66666666553222233457899999986 58999999999997 4556 8999999998876543
No 153
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=93.98 E-value=0.14 Score=55.03 Aligned_cols=117 Identities=15% Similarity=0.071 Sum_probs=74.9
Q ss_pred ceeeecCCCCcc--eee-ecCChhHH-------HHHHhc-CcCCCcEEEEecccCchhhHHHHHHHHh-ccCc-EEEe--
Q 006590 430 EIYLERQPNKLK--IKV-VDGSSLAA-------AVVVNS-LPKTTAHVLLRGTVTANKVANAVASSLC-QMGI-KVAT-- 494 (639)
Q Consensus 430 ~~~~~k~p~~L~--irv-v~Gnslta-------avv~~~-ip~~~~~V~~~Gatg~~kig~ava~~L~-~~~~-~v~~-- 494 (639)
++.+.-+|+ -. ..+ .||+.+|+ ++.... -+++.++|.++|+- ..|++.+++|+ .+++ +|.+
T Consensus 86 g~i~l~d~~-tG~~~ai~~d~~~lT~~RTaa~~~laa~~la~~~~~~v~iiGaG---~qA~~~~~al~~~~~i~~v~V~~ 161 (326)
T TIGR02992 86 GMMVLLSSR-TGLLQALLLDNGYLTDVRTAAAGAVAARHLAREDSSVVAIFGAG---MQARLQLEALTLVRDIRSARIWA 161 (326)
T ss_pred EEEEEEECC-CCCceEEEcCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCC---HHHHHHHHHHHHhCCccEEEEEC
Confidence 355555554 22 344 37777763 122222 25677899999996 79999999998 4664 4666
Q ss_pred cchhhHHHHHhhCccccccceeeeccccc--cceeEEEEcC-----cCChhhhhcCCCCceeeccc
Q 006590 495 ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-----DLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 495 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-----~~~~~~q~~a~~G~~f~~~~ 553 (639)
|+.++.+++.+++..+.+.......++++ ++++|++.-. .++++. .++|+++..+.
T Consensus 162 R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p~i~~~~---l~~g~~i~~vg 224 (326)
T TIGR02992 162 RDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETPILHAEW---LEPGQHVTAMG 224 (326)
T ss_pred CCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCcEecHHH---cCCCcEEEeeC
Confidence 99999999988875443333122334554 7788877322 244444 48999988775
No 154
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=93.98 E-value=0.14 Score=50.89 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=36.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|..|.+ |+.++.+++.+++
T Consensus 6 ~~~vlItGa~g--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (245)
T PRK12936 6 GRKALVTGASG--GIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL 50 (245)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 46899999998 9999999999999999887 7777777776554
No 155
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.97 E-value=0.13 Score=52.94 Aligned_cols=44 Identities=25% Similarity=0.288 Sum_probs=36.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 9 ~~~~vlVtGa~g--~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~ 54 (274)
T PRK07775 9 DRRPALVAGASS--GIGAATAIELAAAGFPVALGARRVEKCEELVDKI 54 (274)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 346899999998 9999999999999999877 7777777665553
No 156
>PRK12829 short chain dehydrogenase; Provisional
Probab=93.96 E-value=0.083 Score=53.16 Aligned_cols=45 Identities=20% Similarity=0.420 Sum_probs=38.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..++|+++|++| .||+++|+.|+++|.+|.+ |++++.++++++.+
T Consensus 10 ~~~~vlItGa~g--~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~ 56 (264)
T PRK12829 10 DGLRVLVTGGAS--GIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP 56 (264)
T ss_pred CCCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 347899999998 9999999999999999988 88888877766643
No 157
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.94 E-value=0.079 Score=56.28 Aligned_cols=148 Identities=22% Similarity=0.255 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 006590 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 449 (639)
.+-+.-+...++.|++.|++.. -|. +++..++||.|- ++.++.= |++++. +=|||=|
T Consensus 44 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~ 123 (284)
T PRK14179 44 PASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFH 123 (284)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccC
Confidence 3445556667778888888764 344 233336778764 3555421 222331 2234433
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006590 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|++.|++=+ +-.-++|.++|..| -+|+.+|..|.++|..|++ .++.+
T Consensus 124 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~--ivG~Pla~lL~~~gatVtv~~s~t~-------- 193 (284)
T PRK14179 124 PMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSN--IVGKPMAQLLLDKNATVTLTHSRTR-------- 193 (284)
T ss_pred HhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cCcHHHHHHHHHCCCEEEEECCCCC--------
Confidence 4667766544 44678999999998 9999999999999999999 21111
Q ss_pred ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCcee
Q 006590 508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 566 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y 566 (639)
++++ ++++|+| +| +.++++. .++|+++||++ +.+. ++.-|+-+
T Consensus 194 ------------~l~~~~~~ADIVI~avg~~~~v~~~~---ik~GavVIDvg-in~~~~gkl~GDVdf 245 (284)
T PRK14179 194 ------------NLAEVARKADILVVAIGRGHFVTKEF---VKEGAVVIDVG-MNRDENGKLIGDVDF 245 (284)
T ss_pred ------------CHHHHHhhCCEEEEecCccccCCHHH---ccCCcEEEEec-ceecCCCCeecCccH
Confidence 1222 4566655 33 3455544 69999999999 6652 44456553
No 158
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=93.92 E-value=0.089 Score=57.16 Aligned_cols=137 Identities=17% Similarity=0.207 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEec-ccccccccccCCceeeecCCCCcceeeecCChhHHHHHH---hcCc-CCCcEEEEe
Q 006590 395 INSLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVV---NSLP-KTTAHVLLR 469 (639)
Q Consensus 395 in~~I~~Ai~~A~k~G~kv~~LG-~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~---~~ip-~~~~~V~~~ 469 (639)
|=-+|.+|...|.+.|.-=--|. +|++ .+.+.|.-. -+.++-+|..=.++++. +..+ -+.++|+|+
T Consensus 110 IlGQVK~Ay~~A~~~g~~g~~L~~lf~~--------A~~~aKrVR-teT~I~~~~vSv~s~av~~~~~~~~l~~k~vLvI 180 (338)
T PRK00676 110 IQGQVKRAYLKAARERKLPFALHFLFQK--------ALKEGKVFR-SKGGAPYAEVTIESVVQQELRRRQKSKKASLLFI 180 (338)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHhCCccCCEEEEE
Confidence 34458899999999885311111 1111 244444422 23444444322222233 3332 257899999
Q ss_pred cccCchhhHHHHHHHHhccCcE-EEe--cchhh--HHHHH-hhCccccccceeeeccccccceeEEEEcC--------cC
Q 006590 470 GTVTANKVANAVASSLCQMGIK-VAT--ICKDD--YEKLK-LRIPVEAQHNLVLSTSYAAHKTKIWLVGD--------DL 535 (639)
Q Consensus 470 Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~--~~~l~-~~~~~~~~~~l~~~~~~~~~~~~vwivg~--------~~ 535 (639)
|+ | ++|+-+|++|.++|++ +++ |+.++ |+.+. +.+.-. ..+||+|.+. .+
T Consensus 181 Ga-G--em~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~-------------~~~DvVIs~t~~Tas~~p~i 244 (338)
T PRK00676 181 GY-S--EINRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQ-------------DPYDVIFFGSSESAYAFPHL 244 (338)
T ss_pred cc-c--HHHHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcc-------------cCCCEEEEcCCcCCCCCcee
Confidence 99 5 9999999999999854 666 54432 22211 001101 2446666541 34
Q ss_pred ChhhhhcCCCCceeecccccCCc
Q 006590 536 TGKEQARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 536 ~~~~q~~a~~G~~f~~~~~~~~~ 558 (639)
+.++....++ -.|+|.+ +|+.
T Consensus 245 ~~~~~~~~~~-r~~iDLA-vPRd 265 (338)
T PRK00676 245 SWESLADIPD-RIVFDFN-VPRT 265 (338)
T ss_pred eHHHHhhccC-cEEEEec-CCCC
Confidence 4454444333 4899999 7766
No 159
>PRK06484 short chain dehydrogenase; Validated
Probab=93.87 E-value=0.13 Score=57.82 Aligned_cols=46 Identities=17% Similarity=0.184 Sum_probs=40.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
..+.++++|++| -||+++|+.|+++|.+|.+ |+++++++++++++.
T Consensus 268 ~~k~~lItGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 315 (520)
T PRK06484 268 SPRVVAITGGAR--GIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGD 315 (520)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 457899999998 9999999999999999998 888999988877643
No 160
>PLN02253 xanthoxin dehydrogenase
Probab=93.82 E-value=0.12 Score=52.90 Aligned_cols=45 Identities=16% Similarity=0.163 Sum_probs=38.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.+..+++.+++..
T Consensus 18 ~k~~lItGas~--gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~ 64 (280)
T PLN02253 18 GKVALVTGGAT--GIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG 64 (280)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC
Confidence 46899999998 9999999999999999988 667777777776643
No 161
>PRK06181 short chain dehydrogenase; Provisional
Probab=93.78 E-value=0.13 Score=51.92 Aligned_cols=42 Identities=17% Similarity=0.287 Sum_probs=35.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+|+|++| .||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 2 ~~vlVtGasg--~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l 45 (263)
T PRK06181 2 KVVIITGASE--GIGRALAVRLARAGAQLVLAARNETRLASLAQEL 45 (263)
T ss_pred CEEEEecCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4689999998 9999999999999999998 7777777665554
No 162
>PRK07576 short chain dehydrogenase; Provisional
Probab=93.77 E-value=0.14 Score=52.28 Aligned_cols=44 Identities=14% Similarity=0.288 Sum_probs=37.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 8 ~~k~ilItGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 53 (264)
T PRK07576 8 AGKNVVVVGGTS--GINLGIAQAFARAGANVAVASRSQEKVDAAVAQL 53 (264)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 7777777665554
No 163
>PRK06057 short chain dehydrogenase; Provisional
Probab=93.77 E-value=0.1 Score=52.80 Aligned_cols=44 Identities=16% Similarity=0.122 Sum_probs=38.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++.
T Consensus 7 ~~~vlItGasg--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 52 (255)
T PRK06057 7 GRVAVITGGGS--GIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG 52 (255)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Confidence 36899999998 9999999999999999988 88888887776654
No 164
>PRK06182 short chain dehydrogenase; Validated
Probab=93.77 E-value=0.099 Score=53.45 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=35.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+.++++++.+
T Consensus 3 ~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~l~~~~~ 45 (273)
T PRK06182 3 KKVALVTGASS--GIGKATARRLAAQGYTVYGAARRVDKMEDLAS 45 (273)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 36799999998 9999999999999999998 88888776654
No 165
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.70 E-value=0.17 Score=50.57 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=35.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~ 508 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ +++++.+.+.++++
T Consensus 5 ~k~ilItGas~--gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~ 51 (253)
T PRK08642 5 EQTVLVTGGSR--GLGAAIARAFAREGARVVVNYHQSEDAAEALADELG 51 (253)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 36799999998 9999999999999999976 45666666666543
No 166
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.69 E-value=0.13 Score=50.64 Aligned_cols=41 Identities=22% Similarity=0.266 Sum_probs=33.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (639)
++|+++|++| .||+++|+.|+++|.+|++ ++.++.+.+.++
T Consensus 7 ~~vlItGasg--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (249)
T PRK12825 7 RVALVTGAAR--GLGRAIALRLARAGADVVVHYRSDEEAAEELVEA 50 (249)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 5899999998 9999999999999999877 445555555544
No 167
>PLN00198 anthocyanidin reductase; Provisional
Probab=93.68 E-value=0.14 Score=54.31 Aligned_cols=42 Identities=21% Similarity=0.184 Sum_probs=34.2
Q ss_pred CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006590 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 459 ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
.|...++|+++|++| -||+.+|+.|.++|.+|.. |+.+....
T Consensus 5 ~~~~~~~vlItG~~G--fIG~~l~~~L~~~g~~V~~~~r~~~~~~~ 48 (338)
T PLN00198 5 TPTGKKTACVIGGTG--FLASLLIKLLLQKGYAVNTTVRDPENQKK 48 (338)
T ss_pred cCCCCCeEEEECCch--HHHHHHHHHHHHCCCEEEEEECCCCCHHH
Confidence 366678899999999 9999999999999999854 66554443
No 168
>PLN02583 cinnamoyl-CoA reductase
Probab=93.66 E-value=0.18 Score=52.77 Aligned_cols=31 Identities=16% Similarity=0.111 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..+.|+|+|++| -||+++++.|.++|.+|..
T Consensus 5 ~~k~vlVTGatG--~IG~~lv~~Ll~~G~~V~~ 35 (297)
T PLN02583 5 SSKSVCVMDASG--YVGFWLVKRLLSRGYTVHA 35 (297)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 356899999999 9999999999999999987
No 169
>PRK07806 short chain dehydrogenase; Provisional
Probab=93.59 E-value=0.15 Score=51.03 Aligned_cols=43 Identities=21% Similarity=0.224 Sum_probs=34.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+. ++.+++.+++
T Consensus 6 ~k~vlItGasg--giG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l 51 (248)
T PRK07806 6 GKTALVTGSSR--GIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI 51 (248)
T ss_pred CcEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHH
Confidence 36799999998 9999999999999999977 654 3555555443
No 170
>PRK08862 short chain dehydrogenase; Provisional
Probab=93.58 E-value=0.11 Score=52.57 Aligned_cols=43 Identities=5% Similarity=0.156 Sum_probs=38.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|+++ -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 5 ~k~~lVtGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i 49 (227)
T PRK08862 5 SSIILITSAGS--VLGRTISCHFARLGATLILCDQDQSALKDTYEQC 49 (227)
T ss_pred CeEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 46899999997 9999999999999999999 8899888876664
No 171
>PRK12742 oxidoreductase; Provisional
Probab=93.57 E-value=0.11 Score=51.39 Aligned_cols=44 Identities=23% Similarity=0.240 Sum_probs=36.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ +++++.+++.++.+
T Consensus 6 ~k~vlItGasg--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~ 52 (237)
T PRK12742 6 GKKVLVLGGSR--GIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG 52 (237)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC
Confidence 46899999998 9999999999999999876 45677777766543
No 172
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=93.57 E-value=0.19 Score=48.23 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=45.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-cc------cccceeeec-cccc--cceeEEEE
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-VE------AQHNLVLST-SYAA--HKTKIWLV 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-~~------~~~~l~~~~-~~~~--~~~~vwiv 531 (639)
+|.++|+- ..|.|+|..|+++|.+|+| |+++..+.|+++-. .. ...+ +.++ ++++ ++++++|+
T Consensus 1 KI~ViGaG---~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~-i~~t~dl~~a~~~ad~Iii 75 (157)
T PF01210_consen 1 KIAVIGAG---NWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPEN-IKATTDLEEALEDADIIII 75 (157)
T ss_dssp EEEEESSS---HHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETT-EEEESSHHHHHTT-SEEEE
T ss_pred CEEEECcC---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcc-cccccCHHHHhCcccEEEe
Confidence 58899998 8999999999999999999 88899999987622 11 1123 2344 4653 77777664
No 173
>PRK12828 short chain dehydrogenase; Provisional
Probab=93.53 E-value=0.11 Score=51.15 Aligned_cols=41 Identities=20% Similarity=0.130 Sum_probs=33.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.++..+
T Consensus 7 ~k~vlItGatg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~ 49 (239)
T PRK12828 7 GKVVAITGGFG--GLGRATAAWLAARGARVALIGRGAAPLSQTLP 49 (239)
T ss_pred CCEEEEECCCC--cHhHHHHHHHHHCCCeEEEEeCChHhHHHHHH
Confidence 46799999998 9999999999999999888 76665544333
No 174
>PRK08703 short chain dehydrogenase; Provisional
Probab=93.52 E-value=0.098 Score=52.22 Aligned_cols=43 Identities=21% Similarity=0.270 Sum_probs=38.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 6 ~k~vlItG~sg--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (239)
T PRK08703 6 DKTILVTGASQ--GLGEQVAKAYAAAGATVILVARHQKKLEKVYDAI 50 (239)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH
Confidence 36899999998 9999999999999999998 8888888877664
No 175
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=93.52 E-value=0.12 Score=54.02 Aligned_cols=34 Identities=24% Similarity=0.204 Sum_probs=29.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
++|+|+|++| -||+.+++.|.++|.+|.. |+.++
T Consensus 5 ~~ilVtGatG--fIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 5 KVVCVTGASG--YIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CEEEEECChH--HHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 6899999999 9999999999999999876 66544
No 176
>PRK08628 short chain dehydrogenase; Provisional
Probab=93.51 E-value=0.15 Score=51.36 Aligned_cols=42 Identities=14% Similarity=0.189 Sum_probs=34.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
..+.++++||+| -||+++|+.|+++|.+|.+ |+++.. ++.++
T Consensus 6 ~~~~ilItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~ 49 (258)
T PRK08628 6 KDKVVIVTGGAS--GIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEE 49 (258)
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHH
Confidence 456899999998 9999999999999999988 666655 44333
No 177
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.47 E-value=0.19 Score=53.18 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=38.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|+++ -||+++|+.|+++| .+|.+ |++++.+++++++.
T Consensus 3 ~k~vlITGas~--GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~ 49 (314)
T TIGR01289 3 KPTVIITGASS--GLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG 49 (314)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence 45789999997 99999999999999 99988 88888888877764
No 178
>PRK05875 short chain dehydrogenase; Provisional
Probab=93.45 E-value=0.13 Score=52.42 Aligned_cols=44 Identities=20% Similarity=0.222 Sum_probs=37.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+++++
T Consensus 6 ~~k~vlItGasg--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (276)
T PRK05875 6 QDRTYLVTGGGS--GIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI 51 (276)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 357899999998 9999999999999999998 7777777666654
No 179
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=93.45 E-value=0.22 Score=52.56 Aligned_cols=60 Identities=23% Similarity=0.200 Sum_probs=45.1
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCc
Q 006590 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~ 508 (639)
|||-....+.--..++. .++|++.||-| .|||++.+|.+.|++ +.+ |+.++-++|.+++.
T Consensus 105 TD~~Gf~~~L~~~~~~~-~~~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~ 167 (272)
T PRK12550 105 TDYIAIAKLLASYQVPP-DLVVALRGSGG---MAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG 167 (272)
T ss_pred cCHHHHHHHHHhcCCCC-CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC
Confidence 66766665553334433 35899999976 589999999998975 777 99999999987754
No 180
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.44 E-value=0.49 Score=50.61 Aligned_cols=140 Identities=19% Similarity=0.267 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006590 393 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 442 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 442 (639)
.+-+.-++..++.|++.|+++.-. . +++.++++|.|- ++.+..= |++++.
T Consensus 43 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~ 122 (295)
T PRK14174 43 PASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFH 122 (295)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 345555777788999999987654 3 444557888884 3555522 332331
Q ss_pred -----eeecCC------hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEe--cchhhH
Q 006590 443 -----KVVDGS------SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDY 500 (639)
Q Consensus 443 -----rvv~Gn------sltaavv~~~ip-----~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~~--~~~~~~ 500 (639)
|+..|. .-|++.|++-+. -.-++|+++|... -||+-+|..|.+ ++..|++ .++..+
T Consensus 123 ~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l 200 (295)
T PRK14174 123 PENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSN--IVGKPMANLMLQKLKESNCTVTICHSATKDI 200 (295)
T ss_pred hhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHhccccCCCEEEEEeCCchhH
Confidence 222332 257777776554 3578999999997 999999999986 7888888 211111
Q ss_pred HHHHhhCccccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006590 501 EKLKLRIPVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 501 ~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
+ +.+ +.++++| +| +.++++.. ++|++++|++ ++.
T Consensus 201 ~---~~~----------------~~ADIvI~Avg~~~li~~~~v---k~GavVIDVg-i~~ 238 (295)
T PRK14174 201 P---SYT----------------RQADILIAAIGKARFITADMV---KPGAVVIDVG-INR 238 (295)
T ss_pred H---HHH----------------HhCCEEEEecCccCccCHHHc---CCCCEEEEee-ccc
Confidence 1 110 3556666 23 45777777 9999999998 554
No 181
>PRK08303 short chain dehydrogenase; Provisional
Probab=93.42 E-value=0.14 Score=54.19 Aligned_cols=43 Identities=16% Similarity=0.175 Sum_probs=35.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc----------hhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------KDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~----------~~~~~~l~~~~ 507 (639)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+ +++.+++++++
T Consensus 8 ~k~~lITGgs~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l 62 (305)
T PRK08303 8 GKVALVAGATR--GAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELV 62 (305)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHH
Confidence 46899999997 8999999999999999988 65 34666665554
No 182
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=93.40 E-value=0.18 Score=53.66 Aligned_cols=42 Identities=14% Similarity=0.107 Sum_probs=33.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+|+|++| -||+++|+.|+++| .+|.+ |+..+.+++++++
T Consensus 5 k~vLVTGatG--~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~ 50 (324)
T TIGR03589 5 KSILITGGTG--SFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF 50 (324)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh
Confidence 5799999999 99999999999886 67776 5555555565554
No 183
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=93.37 E-value=0.064 Score=55.19 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=64.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccccceeEEEEcCcCChhhhhc
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR 542 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~ 542 (639)
.|+|+|+|| -||+++++.|.++|.+|.. |+.+....+. . -..++.++..+.+....
T Consensus 2 ~ILVtG~tG--fiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~------------~~~~~~~d~~~~~~~~~ 59 (314)
T COG0451 2 RILVTGGAG--FIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------S------------GVEFVVLDLTDRDLVDE 59 (314)
T ss_pred eEEEEcCcc--cHHHHHHHHHHhCCCeEEEEeCCCccccccc--------c------------ccceeeecccchHHHHH
Confidence 389999999 9999999999999999998 3333222111 0 01355555555533322
Q ss_pred CCCCceeecccccCCcCCCCCceeecCCccccCCCCcc----ccccccccCcchhHHHHHhhh
Q 006590 543 APKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSN----MHSCENWLGRRVMSAWRIAGI 601 (639)
Q Consensus 543 a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~----~~~~e~~~p~~~~~Ac~a~~~ 601 (639)
+.++ .+ |+.++-......+....+ +..-|....+++..||.++++
T Consensus 60 ~~~~-------------~~-d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~ 108 (314)
T COG0451 60 LAKG-------------VP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV 108 (314)
T ss_pred HHhc-------------CC-CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2222 11 777777777766665432 445667778888888888554
No 184
>PRK08263 short chain dehydrogenase; Provisional
Probab=93.32 E-value=0.13 Score=52.68 Aligned_cols=43 Identities=12% Similarity=0.079 Sum_probs=37.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.++++++..
T Consensus 4 k~vlItGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~ 48 (275)
T PRK08263 4 KVWFITGASR--GFGRAWTEAALERGDRVVATARDTATLADLAEKYG 48 (275)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc
Confidence 5799999998 9999999999999999988 88888888776653
No 185
>PRK08177 short chain dehydrogenase; Provisional
Probab=93.31 E-value=0.11 Score=51.50 Aligned_cols=40 Identities=15% Similarity=0.183 Sum_probs=34.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++++
T Consensus 2 k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 43 (225)
T PRK08177 2 RTALIIGASR--GLGLGLVDRLLERGWQVTATVRGPQQDTALQA 43 (225)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh
Confidence 5799999998 9999999999999999998 77776666543
No 186
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=93.22 E-value=0.18 Score=50.50 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 4 ~~k~vlItGas~--gIG~~ia~~l~~~G~~vi~ 34 (248)
T TIGR01832 4 EGKVALVTGANT--GLGQGIAVGLAEAGADIVG 34 (248)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 347899999998 9999999999999999998
No 187
>PLN02427 UDP-apiose/xylose synthase
Probab=93.19 E-value=0.19 Score=54.39 Aligned_cols=44 Identities=16% Similarity=0.190 Sum_probs=34.1
Q ss_pred CcCCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHH
Q 006590 459 LPKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 459 ip~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~ 504 (639)
-|-...+|+|+|+|| =||+.+++.|.++ |.+|.. |+.++.+.+.
T Consensus 10 ~~~~~~~VlVTGgtG--fIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~ 56 (386)
T PLN02427 10 KPIKPLTICMIGAGG--FIGSHLCEKLMTETPHKVLALDVYNDKIKHLL 56 (386)
T ss_pred CcccCcEEEEECCcc--hHHHHHHHHHHhcCCCEEEEEecCchhhhhhh
Confidence 344566899999999 9999999999987 588886 5555555443
No 188
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.14 E-value=0.12 Score=51.90 Aligned_cols=45 Identities=16% Similarity=0.200 Sum_probs=38.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 11 ~~k~vlItG~~g--~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~ 57 (247)
T PRK08945 11 KDRIILVTGAGD--GIGREAALTYARHGATVILLGRTEEKLEAVYDEIE 57 (247)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 77777777766543
No 189
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.13 E-value=0.53 Score=50.30 Aligned_cols=140 Identities=15% Similarity=0.210 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCcE--EEeccccc-------ccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006590 392 REAINSLIEEAILEADAKGVKV--ISLGLLNQ-------GEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (639)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv--~~LG~ln~-------~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (639)
..+-+.-+....+.|++.|++. .-|..-.+ ++++|.|- ++.++.= |++++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl 121 (293)
T PRK14185 42 DGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF 121 (293)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCC
Confidence 3445555777788999999998 55554322 25788874 3555532 333431 123333
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHH
Q 006590 449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEK 502 (639)
Q Consensus 449 s----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~ 502 (639)
+ -|++.|++=+ +-.-++|+++|... -||+-+|..|.++ +..|++ .++-
T Consensus 122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T---- 195 (293)
T PRK14185 122 HPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSN--IVGKPMAQLMMQKAYPGDCTVTVCHSRS---- 195 (293)
T ss_pred CHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHcCCCCCCCEEEEecCCC----
Confidence 2 2677776644 44678999999997 9999999999988 678888 2111
Q ss_pred HHhhCccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCC
Q 006590 503 LKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 503 l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ +.++|+| +|+ -++++.. ++|+++||+. +.+
T Consensus 196 ----------~------nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~ 236 (293)
T PRK14185 196 ----------K------NLKKECLEADIIIAALGQPEFVKADMV---KEGAVVIDVG-TTR 236 (293)
T ss_pred ----------C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence 0 1222 3566766 443 4677666 9999999998 654
No 190
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.13 E-value=0.22 Score=50.35 Aligned_cols=44 Identities=27% Similarity=0.437 Sum_probs=35.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ ++.++.+++.+++
T Consensus 8 ~~k~vlItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 54 (258)
T PRK09134 8 APRAALVTGAAR--RIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEI 54 (258)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 346899999998 9999999999999999976 3456666665553
No 191
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=93.10 E-value=0.092 Score=56.32 Aligned_cols=67 Identities=18% Similarity=0.300 Sum_probs=45.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccc--cc-eeeeccccc-cceeEEEE
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ--HN-LVLSTSYAA-HKTKIWLV 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~--~~-l~~~~~~~~-~~~~vwiv 531 (639)
...+|.++|| | .||+++|..|+.+|+ ++.| +++++.+-...++..... .+ -+...++++ ++++|+|+
T Consensus 5 ~~~ki~iiGa-G--~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIi 79 (315)
T PRK00066 5 QHNKVVLVGD-G--AVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVI 79 (315)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEE
Confidence 3459999998 8 999999999998888 5666 667776655554332211 11 122334777 89988776
No 192
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.07 E-value=0.15 Score=50.62 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=36.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 6 ~~vlItGa~g--~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (238)
T PRK05786 6 KKVAIIGVSE--GLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL 49 (238)
T ss_pred cEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 5899999998 9999999999999999998 8888887775553
No 193
>PRK07035 short chain dehydrogenase; Provisional
Probab=93.07 E-value=0.15 Score=51.29 Aligned_cols=44 Identities=23% Similarity=0.228 Sum_probs=38.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++.
T Consensus 8 ~k~vlItGas~--gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~ 53 (252)
T PRK07035 8 GKIALVTGASR--GIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIV 53 (252)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 88888887777653
No 194
>PRK07832 short chain dehydrogenase; Provisional
Probab=93.06 E-value=0.14 Score=52.34 Aligned_cols=42 Identities=14% Similarity=0.172 Sum_probs=36.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.++++|++| -||+++|+.|+++|.+|.+ |+.+..+++.+++
T Consensus 1 k~vlItGas~--giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~ 44 (272)
T PRK07832 1 KRCFVTGAAS--GIGRATALRLAAQGAELFLTDRDADGLAQTVADA 44 (272)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 3689999998 9999999999999999888 7778777776654
No 195
>PRK05693 short chain dehydrogenase; Provisional
Probab=93.03 E-value=0.14 Score=52.30 Aligned_cols=41 Identities=24% Similarity=0.306 Sum_probs=35.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.++++
T Consensus 2 k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 44 (274)
T PRK05693 2 PVVLITGCSS--GIGRALADAFKAAGYEVWATARKAEDVEALAAA 44 (274)
T ss_pred CEEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC
Confidence 4789999998 9999999999999999988 888877776543
No 196
>PRK06914 short chain dehydrogenase; Provisional
Probab=93.02 E-value=0.15 Score=52.15 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=36.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++++++
T Consensus 4 k~~lItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 47 (280)
T PRK06914 4 KIAIVTGASS--GFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA 47 (280)
T ss_pred CEEEEECCCc--hHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence 5689999998 9999999999999999988 8888887776653
No 197
>PLN02650 dihydroflavonol-4-reductase
Probab=93.00 E-value=0.19 Score=53.64 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=34.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
..++|+|+|++| -||+++++.|.++|.+|.. |+.++.+.++.
T Consensus 4 ~~k~iLVTGatG--fIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~ 47 (351)
T PLN02650 4 QKETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPANVKKVKH 47 (351)
T ss_pred CCCEEEEeCCcH--HHHHHHHHHHHHCCCEEEEEEcCcchhHHHHH
Confidence 356899999999 9999999999999999986 66665555443
No 198
>PRK07985 oxidoreductase; Provisional
Probab=92.97 E-value=0.19 Score=52.62 Aligned_cols=42 Identities=21% Similarity=0.296 Sum_probs=33.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~--~~~~~~l~~~ 506 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ ++ +++.+++++.
T Consensus 49 ~k~vlITGas~--gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~ 94 (294)
T PRK07985 49 DRKALVTGGDS--GIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKI 94 (294)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHH
Confidence 36899999998 9999999999999999988 32 3455555544
No 199
>PRK06953 short chain dehydrogenase; Provisional
Probab=92.97 E-value=0.14 Score=50.64 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=35.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++++
T Consensus 2 ~~vlvtG~sg--~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~ 43 (222)
T PRK06953 2 KTVLIVGASR--GIGREFVRQYRADGWRVIATARDAAALAALQA 43 (222)
T ss_pred ceEEEEcCCC--chhHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence 4689999998 9999999999999999988 77777777654
No 200
>PRK12827 short chain dehydrogenase; Provisional
Probab=92.95 E-value=0.22 Score=49.44 Aligned_cols=43 Identities=21% Similarity=0.291 Sum_probs=34.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe------cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT------ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~------~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..+++.+++
T Consensus 6 ~~~ilItGasg--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 54 (249)
T PRK12827 6 SRRVLITGGSG--GLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGI 54 (249)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHH
Confidence 36799999998 9999999999999999877 3455556555553
No 201
>PRK08278 short chain dehydrogenase; Provisional
Probab=92.95 E-value=0.17 Score=52.00 Aligned_cols=34 Identities=12% Similarity=0.221 Sum_probs=29.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.+
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 6 GKTLFITGASR--GIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecccc
Confidence 36799999998 9999999999999999988 5543
No 202
>PRK12937 short chain dehydrogenase; Provisional
Probab=92.93 E-value=0.24 Score=49.19 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=33.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~ 506 (639)
.+.|+++|++| -||+++|+.|+++|.++++ + ++++.+++.++
T Consensus 5 ~~~vlItG~~~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~ 49 (245)
T PRK12937 5 NKVAIVTGASR--GIGAAIARRLAADGFAVAVNYAGSAAAADELVAE 49 (245)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH
Confidence 46899999998 9999999999999999877 3 34445555444
No 203
>PLN02686 cinnamoyl-CoA reductase
Probab=92.92 E-value=0.22 Score=54.10 Aligned_cols=42 Identities=26% Similarity=0.321 Sum_probs=34.9
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006590 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (639)
...+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+.++
T Consensus 51 ~~~k~VLVTGatG--fIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 51 AEARLVCVTGGVS--FLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 3567899999999 9999999999999999975 6666665553
No 204
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=92.91 E-value=0.15 Score=53.35 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=27.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccC--cEEEe--cchh
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKD 498 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~~--~~~~ 498 (639)
+|+|+|||| -||+.+++.|.++| .+|.. |+.+
T Consensus 1 ~vlvtGatG--~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATG--FLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccch--HHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 489999999 99999999999988 56666 6554
No 205
>PRK08291 ectoine utilization protein EutC; Validated
Probab=92.88 E-value=0.29 Score=52.75 Aligned_cols=116 Identities=10% Similarity=0.037 Sum_probs=70.6
Q ss_pred eeeecCCCCcc--eee-ecCChhHHH-----HHH--hc-CcCCCcEEEEecccCchhhHHHHHHHHhc-cC-cEEEe--c
Q 006590 431 IYLERQPNKLK--IKV-VDGSSLAAA-----VVV--NS-LPKTTAHVLLRGTVTANKVANAVASSLCQ-MG-IKVAT--I 495 (639)
Q Consensus 431 ~~~~k~p~~L~--irv-v~Gnsltaa-----vv~--~~-ip~~~~~V~~~Gatg~~kig~ava~~L~~-~~-~~v~~--~ 495 (639)
..+.-+++ .. .-+ .||+.+|+. ..+ .. -+++.++|.++|+- ..|++.+.+|+. ++ .+|.+ |
T Consensus 90 ~i~l~d~~-tG~~~ai~~d~~~lt~~rT~a~~~~a~~~la~~~~~~v~IiGaG---~~a~~~~~al~~~~~~~~V~v~~R 165 (330)
T PRK08291 90 LMVVLSAR-TGLVEALLLDNGYLTDVRTAAAGAVAARHLAREDASRAAVIGAG---EQARLQLEALTLVRPIREVRVWAR 165 (330)
T ss_pred EEEEEeCC-CCceEEEEcCCchHHHHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEcC
Confidence 44444554 22 233 378777631 121 11 25567899999997 679999999983 55 45666 9
Q ss_pred chhhHHHHHhhCccccccceeeeccccc--cceeEEEE----cC-cCChhhhhcCCCCceeeccc
Q 006590 496 CKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD-DLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 496 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~-~~~~~~q~~a~~G~~f~~~~ 553 (639)
++++.+++.+++..+.+.......++++ +++++++. .+ .++.+ +.++|+++..+.
T Consensus 166 ~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~~p~i~~~---~l~~g~~v~~vg 227 (330)
T PRK08291 166 DAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSEEPILKAE---WLHPGLHVTAMG 227 (330)
T ss_pred CHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCCCcEecHH---HcCCCceEEeeC
Confidence 9999999998865443333112334553 67777662 12 23333 347888877653
No 206
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.84 E-value=0.19 Score=53.36 Aligned_cols=149 Identities=22% Similarity=0.259 Sum_probs=96.1
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006590 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (639)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (639)
..+-+.-+....+.|++.|++..- |. +++..+++|.|- ++.+..= |++++. +=|||=
T Consensus 43 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl 122 (284)
T PRK14190 43 DPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGF 122 (284)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccccccc
Confidence 334555567778889999998754 44 334447788885 3555422 332431 123333
Q ss_pred ----------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006590 449 ----------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (639)
Q Consensus 449 ----------------sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (639)
.-|+..|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++. .
T Consensus 123 ~~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~atVt~chs~t--~----- 193 (284)
T PRK14190 123 HPINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSN--IVGKPVGQLLLNENATVTYCHSKT--K----- 193 (284)
T ss_pred CHhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEEeCCc--h-----
Confidence 23666666533 44688999999998 9999999999999999998 2111 1
Q ss_pred Cccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCcee
Q 006590 507 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 566 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y 566 (639)
++++ +.+||+| +| +.++++.. ++|+++||+. +++. ++--|+-+
T Consensus 194 -------------~l~~~~~~ADIvI~AvG~p~~i~~~~i---k~gavVIDvG-i~~~~~gkl~GDvd~ 245 (284)
T PRK14190 194 -------------NLAELTKQADILIVAVGKPKLITADMV---KEGAVVIDVG-VNRLENGKLCGDVDF 245 (284)
T ss_pred -------------hHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-ccccCCCCeeccCcH
Confidence 1221 3556655 33 35788877 9999999998 6652 44455553
No 207
>PLN02494 adenosylhomocysteinase
Probab=92.84 E-value=0.74 Score=52.27 Aligned_cols=156 Identities=15% Similarity=0.132 Sum_probs=97.2
Q ss_pred eeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 006590 442 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 517 (639)
Q Consensus 442 irvv~Gnsltaavv~~~ip--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~ 517 (639)
-|.=||.|. .-.+++... ...++|.|+|.- +||+.+|+.|...|.+|+. ++..+...-... ..+
T Consensus 232 n~yGtgqS~-~d~i~r~t~i~LaGKtVvViGyG---~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~-G~~------- 299 (477)
T PLN02494 232 NLYGCRHSL-PDGLMRATDVMIAGKVAVICGYG---DVGKGCAAAMKAAGARVIVTEIDPICALQALME-GYQ------- 299 (477)
T ss_pred ccccccccH-HHHHHHhcCCccCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhc-CCe-------
Confidence 455567775 333444433 256789999987 9999999999999999998 444443221111 111
Q ss_pred eccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---------------CCCCCceeecCC----cc
Q 006590 518 STSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---------------KLRKDCFYHSTP----AM 572 (639)
Q Consensus 518 ~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---------------~~R~dc~y~~~~----a~ 572 (639)
+.++++ +.+++++ .| ..+..+....+++|++++-++++.+. +.|..+..-+.+ .+
T Consensus 300 vv~leEal~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~i 379 (477)
T PLN02494 300 VLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSGI 379 (477)
T ss_pred eccHHHHHhhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCEE
Confidence 112332 4566666 33 23578899999999999999985422 222222222221 12
Q ss_pred c--cCCCCccccccccccCcchhHHHHHhhhhhhhcCCCC
Q 006590 573 I--IPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL 610 (639)
Q Consensus 573 ~--~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~ 610 (639)
. --+.+-|+. |-.+.|..+|.-.++--.+-..|-|..
T Consensus 380 ~ll~eGrlvNl~-~~~GhP~evmd~sFa~Q~la~~~l~~~ 418 (477)
T PLN02494 380 IVLAEGRLMNLG-CATGHPSFVMSCSFTNQVIAQLELWNE 418 (477)
T ss_pred EEEeCCcccccc-CCCCCCcceeeHHHHHHHHHHHHHHhc
Confidence 1 223467787 899999999999887766666665554
No 208
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=92.83 E-value=0.21 Score=48.94 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=58.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEE------
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------ 531 (639)
..++|.++|-- .||+++|+.|..-|.+|.. ++.+.-+.... .. +...++++ +.++++++
T Consensus 35 ~g~tvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~-------~~~~~l~ell~~aDiv~~~~plt~ 103 (178)
T PF02826_consen 35 RGKTVGIIGYG---RIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FG-------VEYVSLDELLAQADIVSLHLPLTP 103 (178)
T ss_dssp TTSEEEEESTS---HHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TT-------EEESSHHHHHHH-SEEEE-SSSST
T ss_pred CCCEEEEEEEc---CCcCeEeeeeecCCceeEEecccCChhhhccc-cc-------ceeeehhhhcchhhhhhhhhcccc
Confidence 46789999985 9999999999999999999 33332221111 11 12334544 55666541
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCCc
Q 006590 532 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR 558 (639)
Q Consensus 532 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~ 558 (639)
-..|+.++..++|+|++||-++| |+.+
T Consensus 104 ~T~~li~~~~l~~mk~ga~lvN~aRG~~vde~ 135 (178)
T PF02826_consen 104 ETRGLINAEFLAKMKPGAVLVNVARGELVDED 135 (178)
T ss_dssp TTTTSBSHHHHHTSTTTEEEEESSSGGGB-HH
T ss_pred ccceeeeeeeeeccccceEEEeccchhhhhhh
Confidence 35688899999999999999998 5554
No 209
>PRK12743 oxidoreductase; Provisional
Probab=92.83 E-value=0.22 Score=50.41 Aligned_cols=42 Identities=12% Similarity=0.179 Sum_probs=35.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++
T Consensus 3 k~vlItGas~--giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~ 47 (256)
T PRK12743 3 QVAIVTASDS--GIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV 47 (256)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence 5799999997 9999999999999999977 4666666666654
No 210
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.81 E-value=0.22 Score=50.92 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=27.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~ 37 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGAELAF 37 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 35799999853247999999999999999988
No 211
>PRK07060 short chain dehydrogenase; Provisional
Probab=92.81 E-value=0.2 Score=49.78 Aligned_cols=44 Identities=23% Similarity=0.316 Sum_probs=38.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.++.
T Consensus 8 ~~~~~lItGa~g--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 53 (245)
T PRK07060 8 SGKSVLVTGASS--GIGRACAVALAQRGARVVAAARNAAALDRLAGET 53 (245)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 456899999998 9999999999999999988 8888887776654
No 212
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=92.74 E-value=0.19 Score=46.10 Aligned_cols=98 Identities=11% Similarity=0.104 Sum_probs=54.3
Q ss_pred EEEEecccCchhhHHHHHHHHh-ccCcEEEe--cchh-hHHHHHhhCccccccceeeecc--ccc-cceeEEE--EcCcC
Q 006590 465 HVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKD-DYEKLKLRIPVEAQHNLVLSTS--YAA-HKTKIWL--VGDDL 535 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~-~~~~~v~~--~~~~-~~~~l~~~~~~~~~~~l~~~~~--~~~-~~~~vwi--vg~~~ 535 (639)
+|.++|||| -+|+.+++.|. .....+.. .+++ .-+.+....+.-.+..-+.+.+ .++ .++++++ .++..
T Consensus 1 rV~IvGAtG--~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~ 78 (121)
T PF01118_consen 1 RVAIVGATG--YVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA 78 (121)
T ss_dssp EEEEESTTS--HHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH
T ss_pred CEEEECCCC--HHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH
Confidence 589999999 99999999999 55666555 2332 2233333322111111122222 223 7778866 33333
Q ss_pred Chh-hhhcCCCCceeecccccCCc-CCCCCceee
Q 006590 536 TGK-EQARAPKGTIFIPYTQIPPR-KLRKDCFYH 567 (639)
Q Consensus 536 ~~~-~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~ 567 (639)
+.+ ..+-+++|..++|.| .. ++.+||.|.
T Consensus 79 ~~~~~~~~~~~g~~ViD~s---~~~R~~~~~~~~ 109 (121)
T PF01118_consen 79 SKELAPKLLKAGIKVIDLS---GDFRLDDDVPYG 109 (121)
T ss_dssp HHHHHHHHHHTTSEEEESS---STTTTSTTSEEE
T ss_pred HHHHHHHHhhCCcEEEeCC---HHHhCCCCCCEE
Confidence 222 222348999888887 22 344566664
No 213
>PRK06123 short chain dehydrogenase; Provisional
Probab=92.70 E-value=0.23 Score=49.56 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=33.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
+.++++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++
T Consensus 3 ~~~lVtG~~~--~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l 47 (248)
T PRK06123 3 KVMIITGASR--GIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI 47 (248)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHH
Confidence 4789999998 9999999999999988877 4455555555443
No 214
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=92.70 E-value=0.2 Score=50.76 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..+.|+++|+++ -||+++|+.|+++|.+|.+
T Consensus 7 ~~k~~lItGas~--gIG~aia~~l~~~G~~vv~ 37 (251)
T PRK12481 7 NGKVAIITGCNT--GLGQGMAIGLAKAGADIVG 37 (251)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 347899999997 9999999999999999998
No 215
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=92.67 E-value=0.25 Score=49.07 Aligned_cols=41 Identities=24% Similarity=0.169 Sum_probs=33.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (639)
+.|+++|++| -||+++++.|+++|.+|.+ |+.++.+++.++
T Consensus 2 ~~~lItGa~g--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 45 (247)
T PRK09730 2 AIALVTGGSR--GIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNL 45 (247)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH
Confidence 4689999998 9999999999999999865 666666655554
No 216
>PRK06128 oxidoreductase; Provisional
Probab=92.66 E-value=0.2 Score=52.30 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=28.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 55 ~k~vlITGas~--gIG~~~a~~l~~~G~~V~i 84 (300)
T PRK06128 55 GRKALITGADS--GIGRATAIAFAREGADIAL 84 (300)
T ss_pred CCEEEEecCCC--cHHHHHHHHHHHcCCEEEE
Confidence 46899999998 9999999999999999988
No 217
>PRK09242 tropinone reductase; Provisional
Probab=92.60 E-value=0.18 Score=50.85 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=38.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 9 ~k~~lItGa~~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l 53 (257)
T PRK09242 9 GQTALITGASK--GIGLAIAREFLGLGADVLIVARDADALAQARDEL 53 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8888888777664
No 218
>PRK07904 short chain dehydrogenase; Provisional
Probab=92.54 E-value=0.16 Score=51.92 Aligned_cols=44 Identities=14% Similarity=0.227 Sum_probs=36.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhh-HHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDD-YEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~-~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++| .+|.+ |+.++ ++++.+++.
T Consensus 8 ~~~vlItGas~--giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~ 55 (253)
T PRK07904 8 PQTILLLGGTS--EIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMK 55 (253)
T ss_pred CcEEEEEcCCc--HHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHH
Confidence 34799999998 99999999999885 89888 77775 777766643
No 219
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=92.51 E-value=0.17 Score=51.41 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=33.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l 503 (639)
.++|+++||+| .||+++++.|.++|.+|+. |+.++.+++
T Consensus 17 ~~~ilItGasG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~ 57 (251)
T PLN00141 17 TKTVFVAGATG--RTGKRIVEQLLAKGFAVKAGVRDVDKAKTS 57 (251)
T ss_pred CCeEEEECCCc--HHHHHHHHHHHhCCCEEEEEecCHHHHHHh
Confidence 56899999999 9999999999999999876 777776544
No 220
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.50 E-value=0.27 Score=49.34 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=27.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 k~vlItG~sg--~iG~~la~~L~~~g~~vi~ 31 (256)
T PRK12745 3 PVALVTGGRR--GIGLGIARALAAAGFDLAI 31 (256)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 5799999998 9999999999999999988
No 221
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.49 E-value=0.45 Score=52.61 Aligned_cols=85 Identities=18% Similarity=0.210 Sum_probs=57.4
Q ss_pred HHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHH----------HHHHhcCcCCCcEEEEecccCchh
Q 006590 407 DAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAA----------AVVVNSLPKTTAHVLLRGTVTANK 476 (639)
Q Consensus 407 ~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnslta----------avv~~~ip~~~~~V~~~Gatg~~k 476 (639)
.+.|+.|+++- . +|. .+ .|. -+.++-.|..+.+ ...+...+...++|+++|. | +
T Consensus 178 ~~~~~~vi~i~--r-------~~~-~~--~p~-~~~~l~~gD~l~v~g~~~~l~~~~~~~~~~~~~~~~iiIiG~-G--~ 241 (453)
T PRK09496 178 PDIDVRVVAIF--R-------GGR-LI--IPR-GDTVIEAGDEVYFIGAREHIRAVMSEFGRLEKPVKRVMIVGG-G--N 241 (453)
T ss_pred CCCceEEEEEE--E-------CCE-EE--cCC-CCcEecCCCEEEEEeCHHHHHHHHHHhCccCCCCCEEEEECC-C--H
Confidence 35788888763 2 222 11 244 4444444444433 2223333335789999999 5 9
Q ss_pred hHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 477 VANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 477 ig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+|+.+++.|.++|.+|++ +++++.++++++.
T Consensus 242 ~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~ 274 (453)
T PRK09496 242 IGYYLAKLLEKEGYSVKLIERDPERAEELAEEL 274 (453)
T ss_pred HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC
Confidence 999999999999999998 8888899888764
No 222
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.47 E-value=0.3 Score=52.40 Aligned_cols=160 Identities=24% Similarity=0.290 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 006590 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 449 (639)
++-+.-+..-++.|++.|++.. -|. +++..+++|.|- ++.++.= |++++. +=|||=+
T Consensus 45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~ 124 (301)
T PRK14194 45 PASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFH 124 (301)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccC
Confidence 3455556677778999998864 443 334446677774 3555421 222331 2244433
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
-|++.|++=+ +-.-++|.++|..| -+|+.+|..|.++|..|++ +..+
T Consensus 125 ~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~--ivG~PmA~~L~~~gatVtv~~~~t~-------- 194 (301)
T PRK14194 125 SENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSN--IVGKPMAALLLQAHCSVTVVHSRST-------- 194 (301)
T ss_pred hhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEECCCCC--------
Confidence 3666666544 34688999999998 9999999999999999999 2111
Q ss_pred Cccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCCc------CCCCCceeec-----C
Q 006590 507 IPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR------KLRKDCFYHS-----T 569 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~------~~R~dc~y~~-----~ 569 (639)
++++ +.++|+| +|+ .++++ ++++|+++||++ +++. ++.-|+-+.+ .
T Consensus 195 -------------~l~e~~~~ADIVIsavg~~~~v~~~---~ik~GaiVIDvg-in~~~~~g~~kl~GDvdf~~~~~~a~ 257 (301)
T PRK14194 195 -------------DAKALCRQADIVVAAVGRPRLIDAD---WLKPGAVVIDVG-INRIDDDGRSRLVGDVDFDSALPVVS 257 (301)
T ss_pred -------------CHHHHHhcCCEEEEecCChhcccHh---hccCCcEEEEec-ccccCCCCCcceecccchHHHHhhcc
Confidence 1221 3455544 444 34443 369999999999 5542 3446665432 1
Q ss_pred CccccCCCCc
Q 006590 570 PAMIIPPSLS 579 (639)
Q Consensus 570 ~a~~~P~~~~ 579 (639)
....||+.+.
T Consensus 258 ~iTPVPGGVG 267 (301)
T PRK14194 258 AITPVPGGVG 267 (301)
T ss_pred eecCCCCchh
Confidence 1234676544
No 223
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=92.43 E-value=0.24 Score=48.86 Aligned_cols=39 Identities=18% Similarity=0.333 Sum_probs=31.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+|.|+|+ | .+|+.||..+++.|.+|++ ++++.+++.+++
T Consensus 1 ~V~ViGa-G--~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~ 41 (180)
T PF02737_consen 1 KVAVIGA-G--TMGRGIAALFARAGYEVTLYDRSPEALERARKR 41 (180)
T ss_dssp EEEEES--S--HHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred CEEEEcC-C--HHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence 5899999 4 9999999999999999999 777766655444
No 224
>PRK06198 short chain dehydrogenase; Provisional
Probab=92.43 E-value=0.27 Score=49.49 Aligned_cols=43 Identities=14% Similarity=0.191 Sum_probs=34.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+ |.+ |+.++.+.+.+++
T Consensus 6 ~k~vlItGa~g--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l 51 (260)
T PRK06198 6 GKVALVTGGTQ--GLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL 51 (260)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHH
Confidence 46799999998 8999999999999999 777 7766666554443
No 225
>PRK08264 short chain dehydrogenase; Validated
Probab=92.40 E-value=0.17 Score=50.37 Aligned_cols=37 Identities=22% Similarity=0.212 Sum_probs=31.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHH
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYE 501 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~ 501 (639)
.+.|+++|++| .||+++|+.|+++|. +|++ |+.++.+
T Consensus 6 ~~~vlItGgsg--~iG~~la~~l~~~G~~~V~~~~r~~~~~~ 45 (238)
T PRK08264 6 GKVVLVTGANR--GIGRAFVEQLLARGAAKVYAAARDPESVT 45 (238)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCcccEEEEecChhhhh
Confidence 46799999998 999999999999998 8888 6666554
No 226
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=92.37 E-value=0.48 Score=52.84 Aligned_cols=157 Identities=13% Similarity=0.099 Sum_probs=93.3
Q ss_pred ceeeecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccccee
Q 006590 441 KIKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV 516 (639)
Q Consensus 441 ~irvv~Gnsltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~ 516 (639)
+-|.=+|.|.. -.+.+.. ....++|+|+|.- .||+.+|+.|...|.+|+. +++.+....... +.
T Consensus 172 Dn~yg~g~s~~-~~i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~---G~----- 239 (406)
T TIGR00936 172 DNRYGTGQSTI-DGILRATNLLIAGKTVVVAGYG---WCGKGIAMRARGMGARVIVTEVDPIRALEAAMD---GF----- 239 (406)
T ss_pred hcccccchhHH-HHHHHhcCCCCCcCEEEEECCC---HHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhc---CC-----
Confidence 34566777744 3344433 3456799999976 9999999999999999988 455443222211 11
Q ss_pred eeccccc--cceeEEEE----cCcCChhhhhcCCCCceeecccccCCc--------------CCCCCce---eecCCcc-
Q 006590 517 LSTSYAA--HKTKIWLV----GDDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCF---YHSTPAM- 572 (639)
Q Consensus 517 ~~~~~~~--~~~~vwiv----g~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~---y~~~~a~- 572 (639)
.+.++++ +.++++|. -+.++.+....+++|++++-+.+++.+ +.|.-.. .+++-.+
T Consensus 240 ~v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~ 319 (406)
T TIGR00936 240 RVMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIY 319 (406)
T ss_pred EeCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEE
Confidence 1223332 56677662 233566677899999999998886541 2332111 1111111
Q ss_pred cc-CCCCccccccccccCcchhHHHHHhhhhhhhcCCCC
Q 006590 573 II-PPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL 610 (639)
Q Consensus 573 ~~-P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~ 610 (639)
.+ -+..-|+- |..+.|..+|.-.+|-=.+-+++=+.+
T Consensus 320 ll~~GrlvNl~-~~~ghp~~vmd~sfa~q~la~~~l~~~ 357 (406)
T TIGR00936 320 LLAEGRLVNLA-AAEGHPSEVMDMSFANQALAAEYLWKN 357 (406)
T ss_pred EEeCCceeccc-CCCCCcceeeCHHHHHHHHHHHHHHhc
Confidence 11 12355676 888999999977665544444444443
No 227
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.36 E-value=0.32 Score=48.23 Aligned_cols=43 Identities=23% Similarity=0.318 Sum_probs=34.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
.+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 5 ~~~ilI~Gasg--~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 50 (247)
T PRK05565 5 GKVAIVTGASG--GIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI 50 (247)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 35799999998 9999999999999999877 5566666555543
No 228
>PLN02214 cinnamoyl-CoA reductase
Probab=92.32 E-value=0.31 Score=52.23 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=30.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
.++|+|+|++| -||+++++.|.++|.+|.. |+.++
T Consensus 10 ~~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 10 GKTVCVTGAGG--YIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 45799999999 9999999999999999987 65554
No 229
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.32 E-value=0.29 Score=48.73 Aligned_cols=43 Identities=21% Similarity=0.314 Sum_probs=36.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 5 ~~~~lItG~~g--~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~ 49 (253)
T PRK08217 5 DKVIVITGGAQ--GLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC 49 (253)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45799999998 9999999999999999988 7777777766654
No 230
>PRK06484 short chain dehydrogenase; Validated
Probab=92.31 E-value=0.3 Score=54.86 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=40.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
..+.|+++|+++ -||+++|+.|.++|.+|.+ |+.++++++.++++.
T Consensus 4 ~~k~~lITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 51 (520)
T PRK06484 4 QSRVVLVTGAAG--GIGRAACQRFARAGDQVVVADRNVERARERADSLGP 51 (520)
T ss_pred CCeEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 346899999997 9999999999999999988 889999988887654
No 231
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.26 E-value=0.26 Score=50.41 Aligned_cols=43 Identities=14% Similarity=0.109 Sum_probs=32.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~ 506 (639)
+.++++|+++++-||+|+|+.|+++|.+|.+ |+. +..++++++
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~ 56 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEE 56 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHh
Confidence 5789999995235999999999999999988 542 234444444
No 232
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=92.20 E-value=0.31 Score=51.25 Aligned_cols=44 Identities=20% Similarity=0.297 Sum_probs=38.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.++++|++. -||+|+|+.|++.|-+|.+ |++|+.++.++++
T Consensus 7 ~gkvalVTG~s~--GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~ 52 (270)
T KOG0725|consen 7 AGKVALVTGGSS--GIGKAIALLLAKAGAKVVITGRSEERLEETAQEL 52 (270)
T ss_pred CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 356788999996 9999999999999999999 9999988877763
No 233
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=92.19 E-value=0.31 Score=49.38 Aligned_cols=43 Identities=19% Similarity=0.195 Sum_probs=34.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ | +++..+++.+++
T Consensus 7 ~k~~lItGa~~--gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l 52 (261)
T PRK08936 7 GKVVVITGGST--GLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEI 52 (261)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999987 4 344555555543
No 234
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=92.18 E-value=0.26 Score=50.37 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=27.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++|.+-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~ 37 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGI 37 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEE
Confidence 46789999973248999999999999999987
No 235
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.16 E-value=0.32 Score=51.18 Aligned_cols=44 Identities=18% Similarity=0.247 Sum_probs=35.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~ 507 (639)
+.+.++++|++| -||+++|+.|+++|.+|.+ + +.++.+++.+++
T Consensus 11 ~~k~~lVTGas~--gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i 57 (306)
T PRK07792 11 SGKVAVVTGAAA--GLGRAEALGLARLGATVVVNDVASALDASDVLDEI 57 (306)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHH
Confidence 456899999998 9999999999999999998 3 345566665554
No 236
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=92.14 E-value=0.27 Score=51.55 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=32.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l 503 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.++.
T Consensus 5 ~k~vlVtG~~G--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (325)
T PLN02989 5 GKVVCVTGASG--YIASWIVKLLLFRGYTINATVRDPKDRKKT 45 (325)
T ss_pred CCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCCcchhhH
Confidence 36899999999 9999999999999999876 666554443
No 237
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=92.14 E-value=0.24 Score=50.00 Aligned_cols=44 Identities=16% Similarity=0.251 Sum_probs=37.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.++.+ |+.++.+++.+++
T Consensus 10 ~~k~vlVtG~s~--gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l 55 (255)
T PRK06113 10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEI 55 (255)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 457899999998 9999999999999999988 7777777776654
No 238
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=92.12 E-value=0.88 Score=46.75 Aligned_cols=79 Identities=18% Similarity=0.133 Sum_probs=48.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEE-e--c----------chhhHHHHHhhCcc--ccccceeeecc--cccc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA-T--I----------CKDDYEKLKLRIPV--EAQHNLVLSTS--YAAH 524 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~-~--~----------~~~~~~~l~~~~~~--~~~~~l~~~~~--~~~~ 524 (639)
..++|++.| .| +||+.+|+.|.+.|.+|+ + . +.+++.+++++-.. +.... ..+.. +-+.
T Consensus 30 ~~~~v~I~G-~G--~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~-~~~~~~~i~~~ 105 (227)
T cd01076 30 AGARVAIQG-FG--NVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGA-ERITNEELLEL 105 (227)
T ss_pred cCCEEEEEC-CC--HHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCc-eecCCccceee
Confidence 467999999 46 999999999999999999 4 2 44555555544211 11000 00111 1114
Q ss_pred ceeEEE---EcCcCChhhhhcCC
Q 006590 525 KTKIWL---VGDDLTGKEQARAP 544 (639)
Q Consensus 525 ~~~vwi---vg~~~~~~~q~~a~ 544 (639)
+|||.| .++.|+++...+.+
T Consensus 106 ~~Dvlip~a~~~~i~~~~~~~l~ 128 (227)
T cd01076 106 DCDILIPAALENQITADNADRIK 128 (227)
T ss_pred cccEEEecCccCccCHHHHhhce
Confidence 667766 56777776665543
No 239
>PRK06841 short chain dehydrogenase; Provisional
Probab=92.10 E-value=0.25 Score=49.65 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
..+.|+++|++| .||+++|+.|+++|.+|.+ |+.+.
T Consensus 14 ~~k~vlItGas~--~IG~~la~~l~~~G~~Vi~~~r~~~~ 51 (255)
T PRK06841 14 SGKVAVVTGGAS--GIGHAIAELFAAKGARVALLDRSEDV 51 (255)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 356899999998 9999999999999999998 65543
No 240
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.07 E-value=0.24 Score=51.24 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 497 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~ 497 (639)
.+.++++|+++++-||+++|+.|+++|.+|.+ |++
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~ 43 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE 43 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence 46799999994236999999999999999998 554
No 241
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=92.07 E-value=0.24 Score=50.56 Aligned_cols=43 Identities=16% Similarity=0.296 Sum_probs=36.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~ 508 (639)
..|+++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++.
T Consensus 2 ~~~lITGas~--gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~ 47 (267)
T TIGR02685 2 PAAVVTGAAK--RIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELN 47 (267)
T ss_pred CEEEEeCCCC--cHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHH
Confidence 4689999998 8999999999999999988 45677777766654
No 242
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=92.05 E-value=0.18 Score=54.46 Aligned_cols=38 Identities=16% Similarity=0.132 Sum_probs=34.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~ 501 (639)
+.+.|+|+||+| =||+.|+..|-++|..|.- |+.++-+
T Consensus 5 ~~~~VcVTGAsG--fIgswivk~LL~rGY~V~gtVR~~~~~k 44 (327)
T KOG1502|consen 5 EGKKVCVTGASG--FIGSWIVKLLLSRGYTVRGTVRDPEDEK 44 (327)
T ss_pred CCcEEEEeCCch--HHHHHHHHHHHhCCCEEEEEEcCcchhh
Confidence 678999999999 9999999999999999987 8888743
No 243
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=92.05 E-value=0.22 Score=53.12 Aligned_cols=47 Identities=13% Similarity=0.199 Sum_probs=38.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (639)
..+.++++|+.+.+-||+|+|+.|++.|-+|.+ |+.++++.++.++.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~ 55 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLR 55 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhhh
Confidence 456899999931148999999999999999999 88899988876654
No 244
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.05 E-value=0.33 Score=49.51 Aligned_cols=45 Identities=22% Similarity=0.305 Sum_probs=35.6
Q ss_pred CcEEEEecc--cCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhhCcc
Q 006590 463 TAHVLLRGT--VTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Ga--tg~~kig~ava~~L~~~~~~v~~--~~~--~~~~~l~~~~~~ 509 (639)
.+.|+++|+ ++ -||+++|+.|+++|.+|.+ |++ +..++++++++.
T Consensus 7 ~k~~lItGa~~s~--GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~ 57 (256)
T PRK07889 7 GKRILVTGVITDS--SIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPE 57 (256)
T ss_pred CCEEEEeCCCCcc--hHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCC
Confidence 357899999 54 8999999999999999998 443 456777776543
No 245
>PRK07023 short chain dehydrogenase; Provisional
Probab=92.04 E-value=0.31 Score=48.78 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=29.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (639)
..|+++|++| -||+++|+.|+++|.+|++ |+.+
T Consensus 2 ~~vlItGasg--giG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 2 VRAIVTGHSR--GLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred ceEEEecCCc--chHHHHHHHHHhCCCEEEEEecCcc
Confidence 3689999998 9999999999999999988 5544
No 246
>PRK07201 short chain dehydrogenase; Provisional
Probab=92.03 E-value=0.27 Score=56.81 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 371 ~k~vlItGas~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 415 (657)
T PRK07201 371 GKVVLITGASS--GIGRATAIKVAEAGATVFLVARNGEALDELVAEI 415 (657)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 8888888887764
No 247
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.02 E-value=0.24 Score=50.75 Aligned_cols=46 Identities=17% Similarity=0.277 Sum_probs=35.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-----~~~~~~~~l~~~~~ 508 (639)
.+.|+++|+++++-||+|+|+.|+++|.+|.+ |++++.+++.++.+
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~ 56 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG 56 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC
Confidence 46799999753247999999999999999987 33566666666543
No 248
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.97 E-value=0.26 Score=51.63 Aligned_cols=92 Identities=15% Similarity=0.214 Sum_probs=60.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc----------------cceeeec-ccc-c
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ----------------HNLVLST-SYA-A 523 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~----------------~~l~~~~-~~~-~ 523 (639)
++|.++|+- .+|+++|..|++.|.+|++ +++++.+++++++..... ...+..+ +++ +
T Consensus 2 ~~V~VIG~G---~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 2 EKLVVVGAG---VMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred cEEEEECcc---HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 479999995 9999999999999999999 888888887654221100 0012223 465 3
Q ss_pred -cceeEEE--EcCcCChh-----h-hhcCCCCcee-ecccccCCc
Q 006590 524 -HKTKIWL--VGDDLTGK-----E-QARAPKGTIF-IPYTQIPPR 558 (639)
Q Consensus 524 -~~~~vwi--vg~~~~~~-----~-q~~a~~G~~f-~~~~~~~~~ 558 (639)
++++++| +.+..+-+ + ...+++|+++ ++-|-++|.
T Consensus 79 ~~~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~~~~ 123 (288)
T PRK09260 79 VADADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTMSPT 123 (288)
T ss_pred hcCCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCCCHH
Confidence 7787766 33332211 1 1246889866 677778877
No 249
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=91.95 E-value=0.26 Score=54.57 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=59.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecc---ccc--cceeEEE--EcC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS---YAA--HKTKIWL--VGD 533 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~---~~~--~~~~vwi--vg~ 533 (639)
..|++.|+ | .||+++|..|+++| .+|++ |+.+...+++.....+.+-..+.+.. +.+ ++.+++| +.-
T Consensus 2 ~~ilviGa-G--~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 2 MKILVIGA-G--GVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CcEEEECC-c--hhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 47899999 7 99999999999988 88988 99999999987753333222233333 333 5557766 222
Q ss_pred cCChhh-hhcCCCCceeecccc
Q 006590 534 DLTGKE-QARAPKGTIFIPYTQ 554 (639)
Q Consensus 534 ~~~~~~-q~~a~~G~~f~~~~~ 554 (639)
..+..= +.-++.|++++|.|-
T Consensus 79 ~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 79 FVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred hhhHHHHHHHHHhCCCEEEccc
Confidence 222211 234578999999995
No 250
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.93 E-value=0.17 Score=53.42 Aligned_cols=88 Identities=15% Similarity=0.141 Sum_probs=56.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-------------cc---ccceeeec-cccc-
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-------------EA---QHNLVLST-SYAA- 523 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~-------------~~---~~~l~~~~-~~~~- 523 (639)
++|.++|+- .+|+.+|..|++.|.+|++ ++++.+++.++++.. +. ....+..+ ++++
T Consensus 6 ~~V~ViGaG---~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 82 (286)
T PRK07819 6 QRVGVVGAG---QMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDLGDF 82 (286)
T ss_pred cEEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCHHHh
Confidence 579999995 9999999999999999999 788877763322111 10 01112223 4655
Q ss_pred cceeEEE--EcCcCChh-----hhhcC--CCCceeecccc
Q 006590 524 HKTKIWL--VGDDLTGK-----EQARA--PKGTIFIPYTQ 554 (639)
Q Consensus 524 ~~~~vwi--vg~~~~~~-----~q~~a--~~G~~f~~~~~ 554 (639)
++++++| |-+.++-+ +..++ ++|++++.-+-
T Consensus 83 ~~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS 122 (286)
T PRK07819 83 ADRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTS 122 (286)
T ss_pred CCCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 7887766 32333222 12243 88999887665
No 251
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=91.92 E-value=0.21 Score=50.70 Aligned_cols=43 Identities=19% Similarity=0.255 Sum_probs=37.2
Q ss_pred EEEEecccCchhhHHHHHHHHhc----cCcEEEe--cchhhHHHHHhhCcc
Q 006590 465 HVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~----~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.|+++|+++ -||+++|+.|++ +|.+|.+ |++++.+++++++..
T Consensus 2 ~vlItGas~--GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~ 50 (256)
T TIGR01500 2 VCLVTGASR--GFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGA 50 (256)
T ss_pred EEEEecCCC--chHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHh
Confidence 588999997 999999999997 7999988 888999888777543
No 252
>PLN03139 formate dehydrogenase; Provisional
Probab=91.91 E-value=0.094 Score=57.98 Aligned_cols=99 Identities=14% Similarity=0.201 Sum_probs=65.3
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEE-----
Q 006590 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----- 531 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----- 531 (639)
-..++|.++|. | .||+++|+.|..-|.+|.. ++..+-+ ..++.+.. ...++++ +.++++++
T Consensus 197 L~gktVGIVG~-G--~IG~~vA~~L~afG~~V~~~d~~~~~~~-~~~~~g~~------~~~~l~ell~~sDvV~l~lPlt 266 (386)
T PLN03139 197 LEGKTVGTVGA-G--RIGRLLLQRLKPFNCNLLYHDRLKMDPE-LEKETGAK------FEEDLDAMLPKCDVVVINTPLT 266 (386)
T ss_pred CCCCEEEEEee-c--HHHHHHHHHHHHCCCEEEEECCCCcchh-hHhhcCce------ecCCHHHHHhhCCEEEEeCCCC
Confidence 35678999994 5 9999999999999999988 3221111 11111111 1234554 56766552
Q ss_pred ---cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006590 532 ---GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 532 ---g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
-..++.+....|++|+.+|.++| ++.+ +++ -|++.++-
T Consensus 267 ~~T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~l~GAaLDV~~~EP 322 (386)
T PLN03139 267 EKTRGMFNKERIAKMKKGVLIVNNARGAIMDTQAVADACSSGHIGGYGGDVWYPQP 322 (386)
T ss_pred HHHHHHhCHHHHhhCCCCeEEEECCCCchhhHHHHHHHHHcCCceEEEEcCCCCCC
Confidence 23356788899999999999999 4433 444 68887774
No 253
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=91.91 E-value=0.18 Score=53.33 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=68.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEE--EcCc----
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD---- 534 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~---- 534 (639)
+|.++|.. .+|.++|+.|.+.|.+|.+ |++++.++++++- .. ..++.++ ++++++| +-+.
T Consensus 3 ~Ig~IGlG---~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g-~~------~~~s~~~~~~~aDvVi~~vp~~~~~~ 72 (296)
T PRK15461 3 AIAFIGLG---QMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG-AT------PAASPAQAAAGAEFVITMLPNGDLVR 72 (296)
T ss_pred eEEEEeeC---HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC-Cc------ccCCHHHHHhcCCEEEEecCCHHHHH
Confidence 68888866 9999999999999999988 8888888887651 10 1223332 5565544 2221
Q ss_pred --CChh-h-hhcCCCCceeecccccCCcCC--------CCCceeecCCccccCC
Q 006590 535 --LTGK-E-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMIIPP 576 (639)
Q Consensus 535 --~~~~-~-q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~~P~ 576 (639)
+... . ...+++|+++++.|.++|... .+.+.|.+.|.+..|.
T Consensus 73 ~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~~ 126 (296)
T PRK15461 73 SVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSD 126 (296)
T ss_pred HHHcCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCHH
Confidence 1111 1 123579999999999988722 1567788888877665
No 254
>PRK06114 short chain dehydrogenase; Provisional
Probab=91.83 E-value=0.37 Score=48.68 Aligned_cols=44 Identities=20% Similarity=0.279 Sum_probs=34.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~ 507 (639)
..+.++++|++| -||+++|+.|+++|.+|.+ |+. +..+++.+++
T Consensus 7 ~~k~~lVtG~s~--gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l 53 (254)
T PRK06114 7 DGQVAFVTGAGS--GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHI 53 (254)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 346899999998 9999999999999999998 543 3455554443
No 255
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.80 E-value=0.62 Score=49.49 Aligned_cols=141 Identities=20% Similarity=0.252 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC-
Q 006590 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS- 448 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn- 448 (639)
.+-+.-+...++.|++.|++..- |- ++...++||.|- |+.++.= |++++. +=|||=
T Consensus 38 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~ 117 (279)
T PRK14178 38 PASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFH 117 (279)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCC
Confidence 34455566778889999998744 42 344446788875 3555422 333431 112332
Q ss_pred ---------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006590 449 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 449 ---------------sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
.-|++.|++=+ +-.-++|.++|... -+|+.+|..|.++|-.|++ .++. .+|++.+
T Consensus 118 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~--~vGrpla~lL~~~~atVtv~hs~t--~~L~~~~ 193 (279)
T PRK14178 118 PLNLGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSI--DVGRPMAALLLNADATVTICHSKT--ENLKAEL 193 (279)
T ss_pred hhhHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--cccHHHHHHHHhCCCeeEEEecCh--hHHHHHH
Confidence 34666666544 33578999999997 9999999999999999998 2111 1111110
Q ss_pred ccccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006590 508 PVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
+++|++| +| +.++++.. ++|++++|++ ++.
T Consensus 194 ----------------~~ADIvI~Avgk~~lv~~~~v---k~GavVIDVg-i~~ 227 (279)
T PRK14178 194 ----------------RQADILVSAAGKAGFITPDMV---KPGATVIDVG-INQ 227 (279)
T ss_pred ----------------hhCCEEEECCCcccccCHHHc---CCCcEEEEee-ccc
Confidence 3566666 44 44677665 9999999999 665
No 256
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.78 E-value=0.26 Score=50.41 Aligned_cols=46 Identities=17% Similarity=0.229 Sum_probs=36.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~---~~~~~~l~~~~~ 508 (639)
.+.++++|+++.+-||+++|+.|+++|.+|.+ |+ +++++++++++.
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~ 57 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE 57 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC
Confidence 46789999971027999999999999999998 32 467788877764
No 257
>PRK07069 short chain dehydrogenase; Validated
Probab=91.77 E-value=0.2 Score=49.95 Aligned_cols=41 Identities=20% Similarity=0.331 Sum_probs=35.0
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCc
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIP 508 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~-~~~~~~l~~~~~ 508 (639)
|+++|++| -||+++|+.|+++|.+|.+ |+ .++++.+++++.
T Consensus 2 ilVtG~~~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~ 45 (251)
T PRK07069 2 AFITGAAG--GLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEIN 45 (251)
T ss_pred EEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH
Confidence 79999998 9999999999999999988 65 677777776643
No 258
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.74 E-value=0.34 Score=51.62 Aligned_cols=146 Identities=27% Similarity=0.322 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh-
Q 006590 394 AINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS- 449 (639)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns- 449 (639)
+-+.-+...++.|++.|++..-. . +++..++||.|. ++.++.= |++++. +=|||=+
T Consensus 45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~ 124 (285)
T PRK14189 45 ASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHV 124 (285)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCCh
Confidence 44455667778899999887543 2 233346788874 3555422 333441 2245543
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 006590 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (639)
Q Consensus 450 ---------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (639)
-|+..|++=+ +-..++|.++|.++ -||+-+|..|.++|..|++ .++
T Consensus 125 ~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVt~~hs~----------- 191 (285)
T PRK14189 125 ANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSN--IVGKPMAMLLLQAGATVTICHSK----------- 191 (285)
T ss_pred hhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEecCC-----------
Confidence 3666666543 44688999999997 8899999999999999998 111
Q ss_pred cccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006590 509 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 565 (639)
Q Consensus 509 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 565 (639)
.. ++++ +++|++| +| ..++++.. ++|+++||+. +++. ++--|+-
T Consensus 192 ---t~------~l~~~~~~ADIVV~avG~~~~i~~~~i---k~gavVIDVG-in~~~~gkl~GDVd 244 (285)
T PRK14189 192 ---TR------DLAAHTRQADIVVAAVGKRNVLTADMV---KPGATVIDVG-MNRDDAGKLCGDVD 244 (285)
T ss_pred ---CC------CHHHHhhhCCEEEEcCCCcCccCHHHc---CCCCEEEEcc-ccccCCCCeeCCcc
Confidence 00 1221 3555655 33 24666544 9999999998 6652 4445554
No 259
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.71 E-value=0.45 Score=50.67 Aligned_cols=161 Identities=19% Similarity=0.195 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC-
Q 006590 393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS- 448 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn- 448 (639)
.+-+.-+..-++.|++.|++. .-|. +++..++||.|- ++.++.= |++++. +=|||=
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~ 123 (284)
T PRK14193 44 PGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLH 123 (284)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCC
Confidence 345555677778899999986 4444 333446788874 3555522 332331 224444
Q ss_pred ---------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhc--cCcEEEe-cchhhHHHHHh
Q 006590 449 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT-ICKDDYEKLKL 505 (639)
Q Consensus 449 ---------------sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~--~~~~v~~-~~~~~~~~l~~ 505 (639)
.-|+..|++=+ +-.-++|+++|.+. -||+-+|..|.+ +|..|++ .++
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~~~atVtvchs~-------- 193 (284)
T PRK14193 124 PTNLGRLVLNEPAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGV--TVGRPIGLLLTRRSENATVTLCHTG-------- 193 (284)
T ss_pred hhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHhhccCCCEEEEeCCC--------
Confidence 23666666544 44678999999998 999999999997 7898988 221
Q ss_pred hCccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce----eecCCcc
Q 006590 506 RIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF----YHSTPAM 572 (639)
Q Consensus 506 ~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~----y~~~~a~ 572 (639)
+. ++++ +.+||+| +| +.++++.. ++|+++||+. +++. ++.-|+- -.-...+
T Consensus 194 ------T~------~l~~~~k~ADIvV~AvGkp~~i~~~~i---k~GavVIDvG-in~~~~gkl~GDvd~~v~~~a~~iT 257 (284)
T PRK14193 194 ------TR------DLAAHTRRADIIVAAAGVAHLVTADMV---KPGAAVLDVG-VSRAGDGKLVGDVHPDVWEVAGAVS 257 (284)
T ss_pred ------CC------CHHHHHHhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-ccccCCCcEEeecCHhHHhhCCEEe
Confidence 01 1222 3566655 34 35788877 9999999998 6652 3334444 2222335
Q ss_pred ccCCCCc
Q 006590 573 IIPPSLS 579 (639)
Q Consensus 573 ~~P~~~~ 579 (639)
.||+.+.
T Consensus 258 PVPGGVG 264 (284)
T PRK14193 258 PNPGGVG 264 (284)
T ss_pred CCCCChh
Confidence 5777654
No 260
>PRK06179 short chain dehydrogenase; Provisional
Probab=91.69 E-value=0.2 Score=50.89 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=30.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.
T Consensus 5 ~~vlVtGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~ 41 (270)
T PRK06179 5 KVALVTGASS--GIGRATAEKLARAGYRVFGTSRNPARA 41 (270)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCChhhc
Confidence 5799999998 9999999999999999998 665544
No 261
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=91.62 E-value=0.37 Score=48.65 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=33.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++ ..+++.+++
T Consensus 8 ~k~vlVtGas~--gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~ 51 (260)
T PRK12823 8 GKVVVVTGAAQ--GIGRGVALRAAAEGARVVLVDRSE-LVHEVAAEL 51 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHH
Confidence 46799999998 9999999999999999988 543 344454443
No 262
>PRK08219 short chain dehydrogenase; Provisional
Probab=91.61 E-value=0.25 Score=48.41 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=34.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+|+|++| .||+++|+.|+++ .+|.. |+.++.++++++.
T Consensus 4 ~~vlVtG~~g--~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~ 46 (227)
T PRK08219 4 PTALITGASR--GIGAAIARELAPT-HTLLLGGRPAERLDELAAEL 46 (227)
T ss_pred CEEEEecCCc--HHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh
Confidence 5799999998 9999999999988 88887 8878777776543
No 263
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=91.58 E-value=0.31 Score=47.25 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=59.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccc----cee-----------eecc----c
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH----NLV-----------LSTS----Y 521 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~----~l~-----------~~~~----~ 521 (639)
.++|+|+|+- .+|...++.|.+.|.+|+. .+.++.++++......... .+. .... +
T Consensus 20 p~~vvv~G~G---~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 96 (168)
T PF01262_consen 20 PAKVVVTGAG---RVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF 96 (168)
T ss_dssp T-EEEEESTS---HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred CeEEEEECCC---HHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence 4688899965 9999999999999999999 5555666555442221111 000 0111 2
Q ss_pred cc--cceeEEE---------EcCcCChhhhhcCCCCceeecccccCCc
Q 006590 522 AA--HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 522 ~~--~~~~vwi---------vg~~~~~~~q~~a~~G~~f~~~~~~~~~ 558 (639)
.+ +.++++| .-..++.++.++++||.+++|+| .+.-
T Consensus 97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis-~D~g 143 (168)
T PF01262_consen 97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS-CDQG 143 (168)
T ss_dssp HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT-GGGT
T ss_pred HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE-ecCC
Confidence 22 5567766 23578999999999999999999 5554
No 264
>PRK05855 short chain dehydrogenase; Validated
Probab=91.53 E-value=0.38 Score=54.06 Aligned_cols=44 Identities=18% Similarity=0.232 Sum_probs=38.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+...++++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 314 ~~~~~lv~G~s~--giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~ 359 (582)
T PRK05855 314 SGKLVVVTGAGS--GIGRETALAFAREGAEVVASDIDEAAAERTAELI 359 (582)
T ss_pred CCCEEEEECCcC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 346789999998 9999999999999999988 8888888877665
No 265
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.53 E-value=0.28 Score=49.50 Aligned_cols=41 Identities=22% Similarity=0.361 Sum_probs=33.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL 505 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~ 505 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..+++++
T Consensus 7 ~k~~lItGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~ 50 (255)
T PRK06463 7 GKVALITGGTR--GIGRAIAEAFLREGAKVAVLYNSAENEAKELRE 50 (255)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh
Confidence 46899999998 9999999999999999987 34445555554
No 266
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=91.53 E-value=0.96 Score=45.38 Aligned_cols=148 Identities=12% Similarity=0.146 Sum_probs=85.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccccceeEEE---EcCcCC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL---VGDDLT 536 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi---vg~~~~ 536 (639)
..++|.+.|.. ++|+++|+.|.+.|.+|+. ++.++.++++++...+. +...++-+.+++|.+ .|..|+
T Consensus 27 ~gk~v~I~G~G---~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~----v~~~~l~~~~~Dv~vp~A~~~~I~ 99 (200)
T cd01075 27 EGKTVAVQGLG---KVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV----VAPEEIYSVDADVFAPCALGGVIN 99 (200)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE----EcchhhccccCCEEEecccccccC
Confidence 45789999994 9999999999999999999 77778888877643211 111111114677766 567889
Q ss_pred hhhhhcCCCCceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhhhhcCCC---CCcc
Q 006590 537 GKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWD---LNEC 613 (639)
Q Consensus 537 ~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~---~~e~ 613 (639)
++...+++.. .++.-+.-|-...+.|=...+.+++-+|+-+-|-. |++..--.|. +.|.
T Consensus 100 ~~~~~~l~~~-~v~~~AN~~~~~~~~~~~L~~~Gi~~~Pd~~~NaG-----------------Gv~~~~~e~~~~~~~~~ 161 (200)
T cd01075 100 DDTIPQLKAK-AIAGAANNQLADPRHGQMLHERGILYAPDYVVNAG-----------------GLINVADELYGGNEARV 161 (200)
T ss_pred HHHHHHcCCC-EEEECCcCccCCHhHHHHHHHCCCEEeCceeeeCc-----------------CceeehhHHhCCcHHHH
Confidence 8888776544 34444421111112222223344444554322111 1111111111 2223
Q ss_pred ch-h---hhhHHHHHHHHHhcCCcc
Q 006590 614 GQ-T---MCDIHQVWHASLRHGFRP 634 (639)
Q Consensus 614 G~-i---v~~i~~i~~aa~kHGF~p 634 (639)
-+ + .+.+.+|++.|.++|-.|
T Consensus 162 ~~~~~~~~~~~~~v~~~a~~~~~~~ 186 (200)
T cd01075 162 LAKVEAIYDTLLEIFAQAKQDGITT 186 (200)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCH
Confidence 23 2 588999999999998765
No 267
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=91.47 E-value=0.21 Score=46.91 Aligned_cols=66 Identities=17% Similarity=0.212 Sum_probs=43.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc--cceeEEEE---cCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV---GDD 534 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv---g~~ 534 (639)
.-+|-++|+- |+|.+++++|.+.|..|.- |+.+.-++++.+++... +.++++ .+++++++ ||.
T Consensus 10 ~l~I~iIGaG---rVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~------~~~~~~~~~~aDlv~iavpDda 80 (127)
T PF10727_consen 10 RLKIGIIGAG---RVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGA------ILDLEEILRDADLVFIAVPDDA 80 (127)
T ss_dssp --EEEEECTS---CCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----------TTGGGCC-SEEEE-S-CCH
T ss_pred ccEEEEECCC---HHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccc------ccccccccccCCEEEEEechHH
Confidence 4578999994 9999999999999999876 77777888877776655 444443 67788664 555
Q ss_pred CCh
Q 006590 535 LTG 537 (639)
Q Consensus 535 ~~~ 537 (639)
|.+
T Consensus 81 I~~ 83 (127)
T PF10727_consen 81 IAE 83 (127)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 268
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=91.43 E-value=0.71 Score=47.15 Aligned_cols=147 Identities=19% Similarity=0.146 Sum_probs=84.2
Q ss_pred EEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeecccc-c-cceeEEEEc----CcC-C
Q 006590 467 LLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVG----DDL-T 536 (639)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwivg----~~~-~ 536 (639)
..+|.|| .||.++|+.|.+.|..|.+ |.++.++...+++... +...+.+ + +.++|+++= .+. .
T Consensus 4 ~~i~GtG--niG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~-----i~~~~~~dA~~~aDVVvLAVP~~a~~~v 76 (211)
T COG2085 4 IAIIGTG--NIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL-----ITGGSNEDAAALADVVVLAVPFEAIPDV 76 (211)
T ss_pred EEEeccC--hHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc-----cccCChHHHHhcCCEEEEeccHHHHHhH
Confidence 4566677 9999999999999999999 6667777777765444 2233433 4 677776621 111 1
Q ss_pred hhhhhcCCCCceeecccccCCc-CCCCCceee---cCCcc-----ccCCCCccccccccccCcchhHH--HHHhhhhhhh
Q 006590 537 GKEQARAPKGTIFIPYTQIPPR-KLRKDCFYH---STPAM-----IIPPSLSNMHSCENWLGRRVMSA--WRIAGIIHAL 605 (639)
Q Consensus 537 ~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~---~~~a~-----~~P~~~~~~~~~e~~~p~~~~~A--c~a~~~v~al 605 (639)
.+|.+.+-.|.++||.. +|-. ..++--+|. ++.+- .+|++ |++.| --.++.+..+
T Consensus 77 ~~~l~~~~~~KIvID~t-np~~~~~~~~~~~~~~~~~saae~va~~lp~a-------------kVVkAFn~i~a~~l~~~ 142 (211)
T COG2085 77 LAELRDALGGKIVIDAT-NPIEVNGEPGDLYLVPSEGSAAEIVAKLLPGA-------------KVVKAFNTIPAAVLADL 142 (211)
T ss_pred HHHHHHHhCCeEEEecC-CCccccCCccccccCCCCCcHHHHHHHHCCCc-------------chhhhhcccCHHHhccC
Confidence 34454445678888887 5532 344333332 22221 24443 23333 0112222222
Q ss_pred cCCCCCc-----cchhhhhHHHHHHHHHhcCCccC
Q 006590 606 EGWDLNE-----CGQTMCDIHQVWHASLRHGFRPL 635 (639)
Q Consensus 606 Egw~~~e-----~G~iv~~i~~i~~aa~kHGF~p~ 635 (639)
..-. .. ||+-.+...++.+++.+-||+|+
T Consensus 143 ~~~~-~~~~v~vagDD~~Ak~~v~~L~~~iG~~~l 176 (211)
T COG2085 143 AKPG-GRRDVLVAGDDAEAKAVVAELAEDIGFRPL 176 (211)
T ss_pred CCcC-CceeEEEecCcHHHHHHHHHHHHhcCccee
Confidence 2221 11 33334677889999999999994
No 269
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=91.36 E-value=0.35 Score=48.11 Aligned_cols=40 Identities=25% Similarity=0.394 Sum_probs=31.6
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
|+++|++| -||+++|+.|+++|.+|.+ ++.++.+.+.+++
T Consensus 1 vlItGas~--giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l 43 (239)
T TIGR01831 1 VLVTGASR--GIGRAIANRLAADGFEICVHYHSGRSDAESVVSAI 43 (239)
T ss_pred CEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 58999997 9999999999999999877 3345555555543
No 270
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=91.32 E-value=0.42 Score=54.25 Aligned_cols=61 Identities=26% Similarity=0.382 Sum_probs=45.8
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
|||.....+.--+..+...+.|+++|+ | .+|+++|..|.+.|.++.+ |+.++.+++.++.+
T Consensus 314 TD~~G~~~~l~~~~~~~~~k~vlIiGa-G--giG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~ 376 (477)
T PRK09310 314 TDGEGLFSLLKQKNIPLNNQHVAIVGA-G--GAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ 376 (477)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 566655555433334445678999996 6 8999999999999999888 78888888877643
No 271
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=91.31 E-value=0.4 Score=51.38 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=28.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..++|+|+|+|| =||+.+++.|.++|.+|+.
T Consensus 14 ~~~~vlVtGatG--fiG~~lv~~L~~~g~~V~~ 44 (348)
T PRK15181 14 APKRWLITGVAG--FIGSGLLEELLFLNQTVIG 44 (348)
T ss_pred cCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 457899999999 9999999999999999876
No 272
>PRK12744 short chain dehydrogenase; Provisional
Probab=91.24 E-value=0.26 Score=49.82 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=26.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 8 ~k~vlItGa~~--gIG~~~a~~l~~~G~~vv~ 37 (257)
T PRK12744 8 GKVVLIAGGAK--NLGGLIARDLAAQGAKAVA 37 (257)
T ss_pred CcEEEEECCCc--hHHHHHHHHHHHCCCcEEE
Confidence 36899999998 9999999999999999554
No 273
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=91.20 E-value=0.43 Score=41.23 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=44.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccC---cEEEe---cchhhHHHHHhhCccccccceeeec-ccc-c-cceeEEEE
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMG---IKVAT---ICKDDYEKLKLRIPVEAQHNLVLST-SYA-A-HKTKIWLV 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~---~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~-~~~-~-~~~~vwiv 531 (639)
+|.++|+- ++|.|+++.|.+.| .+|.+ |++|+.++++++.+.+. .. +.+ . ++++++|+
T Consensus 1 kI~iIG~G---~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~~advvil 67 (96)
T PF03807_consen 1 KIGIIGAG---NMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQA------TADDNEEAAQEADVVIL 67 (96)
T ss_dssp EEEEESTS---HHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEE------ESEEHHHHHHHTSEEEE
T ss_pred CEEEECCC---HHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccc------ccCChHHhhccCCEEEE
Confidence 46777665 99999999999999 89885 99999999999977433 22 333 3 66777663
No 274
>PRK07791 short chain dehydrogenase; Provisional
Probab=91.19 E-value=0.44 Score=49.59 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=36.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---------hhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---------~~~~~l~~~~~ 508 (639)
.+.++++|+++ -||+++|+.|+++|.+|.+ ++. ++.+++.+++.
T Consensus 6 ~k~~lITGas~--GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~ 60 (286)
T PRK07791 6 GRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV 60 (286)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHH
Confidence 46899999997 9999999999999999988 444 66777666643
No 275
>PRK12747 short chain dehydrogenase; Provisional
Probab=91.19 E-value=0.29 Score=49.25 Aligned_cols=43 Identities=26% Similarity=0.292 Sum_probs=35.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ +++++.+++..++
T Consensus 4 ~k~~lItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 49 (252)
T PRK12747 4 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI 49 (252)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence 36899999998 9999999999999999987 4556666665554
No 276
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.18 E-value=0.43 Score=50.78 Aligned_cols=149 Identities=22% Similarity=0.268 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 006590 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 449 (639)
++-+.-+....+.|++.|++.. -|. +++..+++|.|- ++.+..= |++++. +=|||=|
T Consensus 43 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~ 122 (285)
T PRK14191 43 PASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFH 122 (285)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 3445556677778899998764 444 333347788763 3555422 332431 2245543
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006590 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++. ++|++.
T Consensus 123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~--~VG~Pla~lL~~~gAtVtv~hs~t--~~l~~~- 197 (285)
T PRK14191 123 PLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASN--IVGKPLAMLMLNAGASVSVCHILT--KDLSFY- 197 (285)
T ss_pred hhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCEEEEEeCCc--HHHHHH-
Confidence 4666666544 44678999999997 9999999999999999999 2111 111110
Q ss_pred ccccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006590 508 PVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 565 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 565 (639)
+ +.++|+| +| +.++++.. ++|+++||+. +++. ++--|+-
T Consensus 198 -----------~----~~ADIvV~AvG~p~~i~~~~v---k~GavVIDvG-i~~~~~gklvGDvd 243 (285)
T PRK14191 198 -----------T----QNADIVCVGVGKPDLIKASMV---KKGAVVVDIG-INRLNDGRLVGDVD 243 (285)
T ss_pred -----------H----HhCCEEEEecCCCCcCCHHHc---CCCcEEEEee-cccccCCceecccc
Confidence 0 2455655 33 34677766 9999999998 6542 3445554
No 277
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.18 E-value=0.34 Score=51.79 Aligned_cols=138 Identities=21% Similarity=0.260 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006590 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (639)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 442 (639)
+-+.-+...++.|++.|++.-- |. ++...++||.|- ++.++.= |++++.
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~ 124 (294)
T PRK14187 45 ASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHN 124 (294)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 4445566677889999988654 42 233346778874 3555522 332431
Q ss_pred ----eeecCC---hh---HHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006590 443 ----KVVDGS---SL---AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (639)
Q Consensus 443 ----rvv~Gn---sl---taavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (639)
|+..|+ .+ |++.|++=+ +-.-++|+|+|.+. -||+-+|..|-++|-.|++ .++-
T Consensus 125 ~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVt~chs~T-------- 194 (294)
T PRK14187 125 ENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSN--IVGKPMACLLLGENCTVTTVHSAT-------- 194 (294)
T ss_pred hhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhhCCCEEEEeCCCC--------
Confidence 333444 22 777766644 44688999999997 9999999999999999999 2111
Q ss_pred Cccccccceeeeccccc--cceeEEE--EcCc--CChhhhhcCCCCceeecccccCC
Q 006590 507 IPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ ++++|+| +|+- ++++.. ++|+++||+- +.+
T Consensus 195 ------~------~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gaiVIDVG-in~ 235 (294)
T PRK14187 195 ------R------DLADYCSKADILVAAVGIPNFVKYSWI---KKGAIVIDVG-INS 235 (294)
T ss_pred ------C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 1 1222 3566655 5544 788877 8999999996 544
No 278
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=91.10 E-value=0.44 Score=47.13 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=32.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~ 506 (639)
+.++++|++| -||+++|+.|+++|.+|.+ | ++++.+++.++
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 44 (242)
T TIGR01829 1 RIALVTGGMG--GIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE 44 (242)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence 4689999998 9999999999999999887 4 55555555443
No 279
>PRK08226 short chain dehydrogenase; Provisional
Probab=91.08 E-value=0.47 Score=47.95 Aligned_cols=33 Identities=15% Similarity=0.351 Sum_probs=29.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 497 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~ 497 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |++
T Consensus 6 ~~~~lItG~s~--giG~~la~~l~~~G~~Vv~~~r~~ 40 (263)
T PRK08226 6 GKTALITGALQ--GIGEGIARVFARHGANLILLDISP 40 (263)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCH
Confidence 46899999998 9999999999999999998 554
No 280
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=91.07 E-value=0.54 Score=46.94 Aligned_cols=30 Identities=17% Similarity=0.320 Sum_probs=27.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 ~k~~lVtG~s~--giG~~~a~~l~~~G~~vv~ 32 (246)
T PRK12938 3 QRIAYVTGGMG--GIGTSICQRLHKDGFKVVA 32 (246)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCEEEE
Confidence 36789999998 9999999999999999887
No 281
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.04 E-value=0.4 Score=51.01 Aligned_cols=148 Identities=21% Similarity=0.258 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006590 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (639)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (639)
..+-+.-+...++.|++.|+++.- |. +++.+++||.|- ++.++.= |++++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl 121 (284)
T PRK14170 42 NQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGF 121 (284)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccC
Confidence 344555577778899999998643 44 344447788875 3555522 222331 224444
Q ss_pred h----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006590 449 S----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (639)
Q Consensus 449 s----------------ltaavv~~~ip-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (639)
| -|++.|++=+. -.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 122 ~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVtichs~T-------- 191 (284)
T PRK14170 122 HPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSN--IVGKPVAQLLLNENATVTIAHSRT-------- 191 (284)
T ss_pred ChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence 3 36677666543 3688999999998 9999999999999999998 2111
Q ss_pred Cccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006590 507 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 565 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 565 (639)
. ++++ +++||+| +| +.++++.. ++|+++||+. ++.. ++--|+-
T Consensus 192 ------~------~l~~~~~~ADIvI~AvG~~~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDvd 243 (284)
T PRK14170 192 ------K------DLPQVAKEADILVVATGLAKFVKKDYI---KPGAIVIDVG-MDRDENNKLCGDVD 243 (284)
T ss_pred ------C------CHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-CcccCCCCeecccc
Confidence 0 1222 3566666 33 35777777 8999999998 6652 3445554
No 282
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=91.00 E-value=2.2 Score=45.79 Aligned_cols=158 Identities=20% Similarity=0.259 Sum_probs=95.9
Q ss_pred HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006590 406 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 456 (639)
Q Consensus 406 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 456 (639)
|.++|++++.|+.= +++|. |....-+.+.|+|+ ..++.|+.+.+ +=..++.
T Consensus 61 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 140 (304)
T TIGR00658 61 AYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVINGLTDLFHPCQALADLLTII 140 (304)
T ss_pred HHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 45699999999643 34444 35566678889987 35677877543 1134555
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhC---ccccccceeeec-ccc-c-cce
Q 006590 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRI---PVEAQHNLVLST-SYA-A-HKT 526 (639)
Q Consensus 457 ~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~~~---~~~~~~~l~~~~-~~~-~-~~~ 526 (639)
+..+. +..+|..+|..+ .+.+..+.+|.+-|++|.+-.++.++ .+.+++ ..+.+.. +..+ +++ + +++
T Consensus 141 e~~g~l~g~~v~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~a 217 (304)
T TIGR00658 141 EHFGKLKGVKVVYVGDGN--NVCNSLMLAGAKLGMDVVVATPEGYEPDADIVKKAQEIAKENGGS-VELTHDPVEAVKGA 217 (304)
T ss_pred HHhCCCCCcEEEEEeCCC--chHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence 55432 456899999986 89999999999999999994433332 111111 1112223 2233 455 4 888
Q ss_pred eEEEEcCcCChh------hhhcCCCCceeecccccCCc---CCCCCce-eecCCcc
Q 006590 527 KIWLVGDDLTGK------EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 572 (639)
Q Consensus 527 ~vwivg~~~~~~------~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~ 572 (639)
+|+.+..|.... +...+ +-+| |++.+ ..|+||. .|.+|+.
T Consensus 218 Dvvy~~~w~~~~~~~~~~~~~~~-----~~~y-~l~~~~l~~~~~~~ivmHplP~~ 267 (304)
T TIGR00658 218 DVIYTDVWVSMGEEDKKEERLKL-----FRPY-QVNEELMELAKPEVIFMHCLPAH 267 (304)
T ss_pred CEEEEcCcccCccccccHHHHHH-----hcCC-cCCHHHHhhcCCCCEEECCCCCC
Confidence 887775444211 11111 2233 37777 5678886 5888874
No 283
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.98 E-value=0.41 Score=50.92 Aligned_cols=160 Identities=18% Similarity=0.239 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006590 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (639)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 442 (639)
+-+.-+...++.|++.|++..- |. +++.++++|.|- ++.++.= |++++.
T Consensus 43 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~ 122 (282)
T PRK14182 43 ASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHP 122 (282)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCH
Confidence 4445566777889999998754 32 333446788874 3555522 333441
Q ss_pred ----eeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006590 443 ----KVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 443 ----rvv~Gn-----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
|+..|+ .-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++- .
T Consensus 123 ~n~g~l~~g~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~AtVtichs~T--~------ 192 (282)
T PRK14182 123 FNVGALSIGIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSN--IVGKPMAMMLLERHATVTIAHSRT--A------ 192 (282)
T ss_pred hHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--C------
Confidence 222232 23666666543 44688999999997 9999999999999999999 2110 1
Q ss_pred ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCceeec-----CCccc
Q 006590 508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMI 573 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~ 573 (639)
.+++ +++||+| +| .-++++.. ++|+++||+. +... ++.-|+-+.+ .....
T Consensus 193 ------------nl~~~~~~ADIvI~AvGk~~~i~~~~i---k~gaiVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTP 256 (282)
T PRK14182 193 ------------DLAGEVGRADILVAAIGKAELVKGAWV---KEGAVVIDVG-MNRLADGKLVGDVEFAAAAARASAITP 256 (282)
T ss_pred ------------CHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEee-ceecCCCCeeCCCCHHHHHhhccEecC
Confidence 1221 3566666 34 34677666 9999999998 6652 4446654322 22244
Q ss_pred cCCCCc
Q 006590 574 IPPSLS 579 (639)
Q Consensus 574 ~P~~~~ 579 (639)
||+.+.
T Consensus 257 VPGGVG 262 (282)
T PRK14182 257 VPGGVG 262 (282)
T ss_pred CCCCCh
Confidence 666544
No 284
>PRK06701 short chain dehydrogenase; Provisional
Probab=90.90 E-value=0.45 Score=49.67 Aligned_cols=42 Identities=24% Similarity=0.331 Sum_probs=33.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~ 506 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+. ++.+.+.++
T Consensus 46 ~k~iLItGasg--gIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~ 90 (290)
T PRK06701 46 GKVALITGGDS--GIGRAVAVLFAKEGADIAIVYLDEHEDANETKQR 90 (290)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH
Confidence 46799999998 9999999999999999988 443 344444444
No 285
>PRK07041 short chain dehydrogenase; Provisional
Probab=90.90 E-value=0.29 Score=48.31 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=34.3
Q ss_pred EEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 467 LLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 1 lItGas~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 42 (230)
T PRK07041 1 LVVGGSS--GIGLALARAFAAEGARVTIASRSRDRLAAAARALG 42 (230)
T ss_pred CeecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 4789998 9999999999999999988 88788877766653
No 286
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=90.83 E-value=0.37 Score=52.92 Aligned_cols=42 Identities=21% Similarity=0.226 Sum_probs=34.3
Q ss_pred hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006590 457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (639)
Q Consensus 457 ~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (639)
.+.+....+|+|+|+|| -||+++++.|.++|.+|.. |+.++.
T Consensus 54 ~~~~~~~~kVLVtGatG--~IG~~l~~~Ll~~G~~V~~l~R~~~~~ 97 (390)
T PLN02657 54 RSKEPKDVTVLVVGATG--YIGKFVVRELVRRGYNVVAVAREKSGI 97 (390)
T ss_pred cccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEEechhhc
Confidence 33444567899999999 9999999999999999988 665543
No 287
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=90.78 E-value=0.68 Score=53.27 Aligned_cols=44 Identities=14% Similarity=0.122 Sum_probs=38.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|+ | -+|+|+|..|.+.|.+|.+ |+.++.+++.+++.
T Consensus 378 ~~k~vlIlGa-G--GagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~ 423 (529)
T PLN02520 378 AGKLFVVIGA-G--GAGKALAYGAKEKGARVVIANRTYERAKELADAVG 423 (529)
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence 4578999999 5 7999999999999999888 88899999987763
No 288
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=90.75 E-value=0.31 Score=51.04 Aligned_cols=97 Identities=16% Similarity=0.257 Sum_probs=62.4
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-cceeEEE--EcCc--C--
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD--L-- 535 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--vg~~--~-- 535 (639)
|.++|. | .+|+++|+.|++.|.+|++ |++++.+.+++. +. ...++.+ . ++++++| +-+. +
T Consensus 2 IgvIG~-G--~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~------~~~~~~~~~~~~aDivi~~vp~~~~~~~ 71 (291)
T TIGR01505 2 VGFIGL-G--IMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GA------VTAETARQVTEQADVIFTMVPDSPQVEE 71 (291)
T ss_pred EEEEEe-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CC------cccCCHHHHHhcCCEEEEecCCHHHHHH
Confidence 678886 4 9999999999999999998 888888887654 11 1122333 2 5666644 2221 1
Q ss_pred ---Chhh-hhcCCCCceeecccccCCc---C----CC-CCceeecCCcc
Q 006590 536 ---TGKE-QARAPKGTIFIPYTQIPPR---K----LR-KDCFYHSTPAM 572 (639)
Q Consensus 536 ---~~~~-q~~a~~G~~f~~~~~~~~~---~----~R-~dc~y~~~~a~ 572 (639)
.+++ ...+++|+++++.|.++|. + ++ +...|.+.|.+
T Consensus 72 v~~~~~~~~~~~~~g~iivd~st~~~~~~~~l~~~l~~~g~~~~~~pv~ 120 (291)
T TIGR01505 72 VAFGENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGIDYLDAPVS 120 (291)
T ss_pred HHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEecCCC
Confidence 1111 2356899999999998885 1 22 34446665654
No 289
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.68 E-value=0.49 Score=50.35 Aligned_cols=151 Identities=20% Similarity=0.232 Sum_probs=93.7
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce----------------
Q 006590 392 REAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI---------------- 442 (639)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i---------------- 442 (639)
..+-+.-+..-++.|++.|++.--. . +++.++++|.|- ++.+..= |++++.
T Consensus 42 d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl 121 (282)
T PRK14180 42 DPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGF 121 (282)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCcccccccc
Confidence 3344555666677889999876543 3 233346788774 2554421 222331
Q ss_pred ------eeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHh
Q 006590 443 ------KVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKL 505 (639)
Q Consensus 443 ------rvv~Gn-----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~ 505 (639)
|+..|+ .-|+.+|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++- .+|++
T Consensus 122 ~~~n~g~l~~g~~~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~ATVt~chs~T--~dl~~ 197 (282)
T PRK14180 122 HPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRFT--TDLKS 197 (282)
T ss_pred ChhhHHHHhcCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEEcCCC--CCHHH
Confidence 223342 34666665544 44688999999998 9999999999999999999 2111 11111
Q ss_pred hCccccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc--CCCCCcee
Q 006590 506 RIPVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY 566 (639)
Q Consensus 506 ~~~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y 566 (639)
. + +++||+| +| +.++++.. ++|+++||+. ++.. ++.-|+-+
T Consensus 198 ~------------~----k~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~~~gkl~GDvd~ 244 (282)
T PRK14180 198 H------------T----TKADILIVAVGKPNFITADMV---KEGAVVIDVG-INHVDGKIVGDVDF 244 (282)
T ss_pred H------------h----hhcCEEEEccCCcCcCCHHHc---CCCcEEEEec-ccccCCceeCCcCH
Confidence 1 1 3566666 34 35777766 9999999998 6652 55566653
No 290
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=90.67 E-value=0.51 Score=53.97 Aligned_cols=94 Identities=14% Similarity=0.104 Sum_probs=60.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------cccc---cceee-ecccc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQ---HNLVL-STSYA 522 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-------------~~~~---~~l~~-~~~~~ 522 (639)
.-++|.++|+ | .+|+.||..|++.|++|++ ++++.+++..+.+. .+.. ...+. .++++
T Consensus 6 ~i~~V~VIGa-G--~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~ 82 (507)
T PRK08268 6 SIATVAVIGA-G--AMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA 82 (507)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH
Confidence 4578999999 5 9999999999999999999 88888877432221 1111 11122 23465
Q ss_pred c-cceeEEE--EcCcCChhh-----hh-cCCCCceee-cccccCCc
Q 006590 523 A-HKTKIWL--VGDDLTGKE-----QA-RAPKGTIFI-PYTQIPPR 558 (639)
Q Consensus 523 ~-~~~~vwi--vg~~~~~~~-----q~-~a~~G~~f~-~~~~~~~~ 558 (639)
+ ++|+++| |-+.++-++ .. -.++|+++. ..|-+|+.
T Consensus 83 ~~~~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl~i~ 128 (507)
T PRK08268 83 DLADCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLSIT 128 (507)
T ss_pred HhCCCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 5 7888777 333333222 22 248899884 77777776
No 291
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=90.66 E-value=0.34 Score=48.39 Aligned_cols=43 Identities=23% Similarity=0.326 Sum_probs=35.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|++ +++++.+++.+++
T Consensus 6 ~~~~lItG~s~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l 51 (247)
T PRK12935 6 GKVAIVTGGAK--GIGKAITVALAQEGAKVVINYNSSKEAAENLVNEL 51 (247)
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHH
Confidence 46899999998 9999999999999999987 4556666665554
No 292
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=90.62 E-value=0.21 Score=51.42 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=29.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (639)
.|+|+|||| .||+.+++.|.++|.+|.. |+.++.
T Consensus 1 ~ilVtGatG--~iG~~vv~~L~~~g~~V~~~~R~~~~~ 36 (285)
T TIGR03649 1 TILLTGGTG--KTASRIARLLQAASVPFLVASRSSSSS 36 (285)
T ss_pred CEEEEcCCC--hHHHHHHHHHHhCCCcEEEEeCCCccc
Confidence 389999999 9999999999999998888 776543
No 293
>PRK06483 dihydromonapterin reductase; Provisional
Probab=90.55 E-value=0.41 Score=47.64 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=30.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++
T Consensus 2 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQ--RIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 35799999998 9999999999999999988 65543
No 294
>PRK06720 hypothetical protein; Provisional
Probab=90.52 E-value=0.42 Score=46.62 Aligned_cols=44 Identities=18% Similarity=0.168 Sum_probs=36.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.++++|+++ -||+++|+.|+++|.+|.+ ++.++.++..+++
T Consensus 15 ~gk~~lVTGa~~--GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l 60 (169)
T PRK06720 15 AGKVAIVTGGGI--GIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI 60 (169)
T ss_pred CCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 356889999997 8999999999999999988 6666666555553
No 295
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.50 E-value=0.52 Score=50.28 Aligned_cols=146 Identities=21% Similarity=0.247 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcc-------------------
Q 006590 394 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLK------------------- 441 (639)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~------------------- 441 (639)
+-+.-++.-++.|++.|++..-.= +++.+++||.|- ++.++.= |++++
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~ 124 (288)
T PRK14171 45 ASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHP 124 (288)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCc
Confidence 444556667778899998765432 344446788774 3555421 22222
Q ss_pred ---eeeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006590 442 ---IKVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 442 ---irvv~Gn-----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
=|+..|+ .-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++-
T Consensus 125 ~N~g~l~~g~~~~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~--iVGkPla~lL~~~~ATVtichs~T--------- 193 (288)
T PRK14171 125 LNVGYLHSGISQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSN--IVGKPLSALLLKENCSVTICHSKT--------- 193 (288)
T ss_pred cchhhhhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC---------
Confidence 1233443 34666666544 34578999999998 9999999999999999998 2111
Q ss_pred ccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006590 508 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 565 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 565 (639)
. ++++ +++||+| +|+ .++++.. ++|+++||+. +... ++.-|+-
T Consensus 194 -----~------~L~~~~~~ADIvV~AvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd 245 (288)
T PRK14171 194 -----H------NLSSITSKADIVVAAIGSPLKLTAEYF---NPESIVIDVG-INRISGNKIIGDVD 245 (288)
T ss_pred -----C------CHHHHHhhCCEEEEccCCCCccCHHHc---CCCCEEEEee-ccccCCCCeECCcc
Confidence 1 1222 3566766 443 4777777 9999999998 6663 4446655
No 296
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.41 E-value=0.53 Score=50.14 Aligned_cols=146 Identities=21% Similarity=0.241 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC--
Q 006590 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS-- 448 (639)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn-- 448 (639)
+-+.-++.-++.|++.|++..- |. +++.+++||.|- ++.++.= |++++. +=|||=
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~ 123 (286)
T PRK14184 44 ASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHP 123 (286)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCH
Confidence 4445566777889999988754 33 333447788864 3555522 333441 113332
Q ss_pred --------------hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEe-cchhhHHHHH
Q 006590 449 --------------SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT-ICKDDYEKLK 504 (639)
Q Consensus 449 --------------sltaavv~~~-----ip~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~~-~~~~~~~~l~ 504 (639)
.-|++.|++= |+-.-++|+++|... -||+-+|..|.+ +|-.|++ .++. .
T Consensus 124 ~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~AtVt~~hs~t--~--- 196 (286)
T PRK14184 124 ENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSN--IVGKPLALMLGAPGKFANATVTVCHSRT--P--- 196 (286)
T ss_pred hhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhCCcccCCCEEEEEeCCc--h---
Confidence 2466666653 344678999999997 999999999998 8888888 2111 0
Q ss_pred hhCccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc--CCCCCce
Q 006590 505 LRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF 565 (639)
Q Consensus 505 ~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~ 565 (639)
++++ +++||+| +| +.++++.. ++|+++||+. +++. ++--|+-
T Consensus 197 ---------------~l~~~~~~ADIVI~AvG~p~li~~~~v---k~GavVIDVG-i~~~~~~l~GDVd 246 (286)
T PRK14184 197 ---------------DLAEECREADFLFVAIGRPRFVTADMV---KPGAVVVDVG-INRTDDGLVGDCD 246 (286)
T ss_pred ---------------hHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-eeccCCCccCCcc
Confidence 1221 3566666 33 35777766 9999999999 7663 4445554
No 297
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=90.41 E-value=0.97 Score=51.72 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=56.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--------c-----c---ccceee-eccccc-
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--------E-----A---QHNLVL-STSYAA- 523 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~--------~-----~---~~~l~~-~~~~~~- 523 (639)
++|.++|+- .+|+.||..|++.|.+|++ ++++.+++..+++.. + . ....+. .+++++
T Consensus 6 ~kV~VIGaG---~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~l 82 (503)
T TIGR02279 6 VTVAVIGAG---AMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLHAL 82 (503)
T ss_pred cEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHHHh
Confidence 469999995 9999999999999999999 888887754322111 1 0 011122 335665
Q ss_pred cceeEEE--EcCcCChhhh------hcCCCCceee-cccccCCc
Q 006590 524 HKTKIWL--VGDDLTGKEQ------ARAPKGTIFI-PYTQIPPR 558 (639)
Q Consensus 524 ~~~~vwi--vg~~~~~~~q------~~a~~G~~f~-~~~~~~~~ 558 (639)
++++++| |-+.++-++. ..+|++++++ .-|-+++.
T Consensus 83 ~~aDlVIEav~E~~~vK~~vf~~l~~~~~~~~IlasnTStl~i~ 126 (503)
T TIGR02279 83 ADAGLVIEAIVENLEVKKALFAQLEELCPADTIIASNTSSLSIT 126 (503)
T ss_pred CCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH
Confidence 7787776 3222222221 2468888876 45545544
No 298
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.38 E-value=0.53 Score=50.04 Aligned_cols=161 Identities=17% Similarity=0.242 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006590 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 442 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 442 (639)
.+-+.-+..-.+.|++.|++..- |. +++.+++||.|- ++.++.= |++++.
T Consensus 42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~ 121 (282)
T PRK14166 42 PASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFH 121 (282)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 34555566677789999988543 43 333346788773 3555421 222331
Q ss_pred -----eeecC-C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006590 443 -----KVVDG-S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (639)
Q Consensus 443 -----rvv~G-n----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (639)
|+..| + .-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ .++-
T Consensus 122 ~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVt~chs~T-------- 191 (282)
T PRK14166 122 PINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIKT-------- 191 (282)
T ss_pred hhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence 22334 1 34666666544 34678999999997 9999999999999999998 2110
Q ss_pred Cccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCceeec-----CCcc
Q 006590 507 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAM 572 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~ 572 (639)
. ++++ +++||+| +| +-++++.. ++|+++||+. +.+. ++--||-+.. ....
T Consensus 192 ------~------nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iT 255 (282)
T PRK14166 192 ------K------DLSLYTRQADLIIVAAGCVNLLRSDMV---KEGVIVVDVG-INRLESGKIVGDVDFEEVSKKSSYIT 255 (282)
T ss_pred ------C------CHHHHHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEec-ccccCCCCeeCCCCHHHHHhhccEec
Confidence 0 1221 3566766 33 35777766 9999999998 6652 4446665332 1124
Q ss_pred ccCCCCc
Q 006590 573 IIPPSLS 579 (639)
Q Consensus 573 ~~P~~~~ 579 (639)
-||+.+.
T Consensus 256 PVPGGVG 262 (282)
T PRK14166 256 PVPGGVG 262 (282)
T ss_pred CCCCCch
Confidence 4666544
No 299
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.36 E-value=0.6 Score=47.41 Aligned_cols=32 Identities=13% Similarity=0.282 Sum_probs=27.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~ 37 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFF 37 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence 46899999994337999999999999999987
No 300
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.31 E-value=0.46 Score=49.16 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=35.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~---~~~~~~l~~~~~ 508 (639)
.+.|+++|+++++-||+++|+.|+++|.+|.+ |+ +++.++++++++
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~ 60 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG 60 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC
Confidence 36799999972137999999999999999988 44 356666666653
No 301
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=90.21 E-value=0.41 Score=50.91 Aligned_cols=29 Identities=10% Similarity=0.184 Sum_probs=25.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
++|+|+|+|| -||+++|+.|+++|.+++.
T Consensus 2 ~~vlVtGatG--fIG~~l~~~L~~~g~~~v~ 30 (355)
T PRK10217 2 RKILITGGAG--FIGSALVRYIINETSDAVV 30 (355)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHHcCCCEEE
Confidence 5799999999 9999999999999977543
No 302
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.14 E-value=0.5 Score=50.40 Aligned_cols=140 Identities=24% Similarity=0.278 Sum_probs=90.3
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCC
Q 006590 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGS 448 (639)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gn 448 (639)
..+-+.-+..-++.|++.|+++.- |- +++..++||.|. ++.++.= |++++ .+=|||=
T Consensus 40 d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl 119 (287)
T PRK14173 40 DPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGF 119 (287)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccc
Confidence 334455566777889999988754 33 233346788774 3555522 33233 1224554
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006590 449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (639)
Q Consensus 449 s----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (639)
+ -|+..|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 120 ~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVtichs~T-------- 189 (287)
T PRK14173 120 HPLNVGRLWMGGEALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSN--IVGKPLAALLLREDATVTLAHSKT-------- 189 (287)
T ss_pred ChhhhHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEeCCCC--------
Confidence 3 3666666544 33578999999998 9999999999999999998 1111
Q ss_pred Cccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006590 507 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ +++||+| +| .-++++.. ++|+++||+. +++
T Consensus 190 ------~------~l~~~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDVG-in~ 230 (287)
T PRK14173 190 ------Q------DLPAVTRRADVLVVAVGRPHLITPEMV---RPGAVVVDVG-INR 230 (287)
T ss_pred ------C------CHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-Ccc
Confidence 0 1221 3556655 44 34677766 9999999998 554
No 303
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.10 E-value=0.44 Score=48.41 Aligned_cols=43 Identities=16% Similarity=0.201 Sum_probs=31.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
.+.|+++|+++++-||+++|+.|+++|.+|.+ |+ ++.++..++
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~ 51 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQK 51 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHh
Confidence 36789999982117999999999999999998 65 344433333
No 304
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=90.08 E-value=1.3 Score=49.47 Aligned_cols=102 Identities=17% Similarity=0.125 Sum_probs=68.0
Q ss_pred eeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 006590 442 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 517 (639)
Q Consensus 442 irvv~Gnsltaavv~~~ip--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~ 517 (639)
-|.=+|.|.. -.+++.+. ...++|+|+|+- .||+.+|+.+...|.+|++ +++.|.+.-++ .+..
T Consensus 180 n~~g~g~s~~-~~i~r~t~~~l~GktVvViG~G---~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~------- 247 (413)
T cd00401 180 NLYGCRESLI-DGIKRATDVMIAGKVAVVAGYG---DVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYE------- 247 (413)
T ss_pred ccchhchhhH-HHHHHhcCCCCCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCE-------
Confidence 4555777753 44445443 356789999998 9999999999999999998 66667654433 2221
Q ss_pred eccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeeccccc
Q 006590 518 STSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQI 555 (639)
Q Consensus 518 ~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~ 555 (639)
..+.++ +.++++| .| ..++.+....+++|.+++-+..+
T Consensus 248 ~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~ 291 (413)
T cd00401 248 VMTMEEAVKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF 291 (413)
T ss_pred EccHHHHHcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 112222 4567766 33 34555668899999999877753
No 305
>PRK07577 short chain dehydrogenase; Provisional
Probab=90.07 E-value=0.33 Score=48.01 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=29.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (639)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.+
T Consensus 4 k~vlItG~s~--~iG~~ia~~l~~~G~~v~~~~r~~~ 38 (234)
T PRK07577 4 RTVLVTGATK--GIGLALSLRLANLGHQVIGIARSAI 38 (234)
T ss_pred CEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5799999998 9999999999999999988 5544
No 306
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.07 E-value=0.48 Score=48.90 Aligned_cols=31 Identities=19% Similarity=0.380 Sum_probs=27.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+.++++|++++.-||+|+|+.|+++|.+|.+
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil 37 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAF 37 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEE
Confidence 5789999984236999999999999999988
No 307
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=90.06 E-value=0.4 Score=48.53 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=28.8
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
...+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 8 l~~k~~lItG~~~--gIG~a~a~~l~~~G~~vv~ 39 (253)
T PRK08993 8 LEGKVAVVTGCDT--GLGQGMALGLAEAGCDIVG 39 (253)
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 3456899999998 9999999999999999987
No 308
>PRK07856 short chain dehydrogenase; Provisional
Probab=90.05 E-value=0.35 Score=48.73 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=31.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
..+.++++|++| -||+++|+.|+++|.+|.+ |+.++
T Consensus 5 ~~k~~lItGas~--gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 5 TGRVVLVTGGTR--GIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 357899999998 9999999999999999998 65544
No 309
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.90 E-value=0.5 Score=49.07 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=35.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~~~ 508 (639)
.+.|+++|+++++-||+|+|+.|+++|.+|.+ |++ ++.+++.++++
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~ 55 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG 55 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence 36889999972137999999999999999998 653 45666655543
No 310
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=89.82 E-value=0.72 Score=48.40 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=34.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
++|.++|+- .+|+++|..|++.|.+|++ +++++.++.++
T Consensus 5 ~kI~vIGaG---~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 5 KKVGVIGAG---QMGNGIAHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred CEEEEECCc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 579999996 9999999999999999999 88888877554
No 311
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.82 E-value=0.69 Score=46.72 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=27.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++|.+-||+++|+.|.++|.+|.+
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~ 36 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFF 36 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEE
Confidence 36799999994236999999999999999998
No 312
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.80 E-value=0.73 Score=49.16 Aligned_cols=138 Identities=18% Similarity=0.203 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh--
Q 006590 395 INSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS-- 449 (639)
Q Consensus 395 in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns-- 449 (639)
-+.-+..-++.|++.|++.- -|. +++..++||.|- ++.++.= |++++. +=|||=+
T Consensus 52 S~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~ 131 (287)
T PRK14176 52 SKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPY 131 (287)
T ss_pred hHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChh
Confidence 34445566677888888653 443 344456777764 3555421 222331 2244433
Q ss_pred --------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccc
Q 006590 450 --------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVE 510 (639)
Q Consensus 450 --------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~ 510 (639)
-|++.|++-+ +-.-++|+++|... -||+-+|..|.++|-.|++-+ .+..+
T Consensus 132 N~g~l~~g~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVtv~h-s~T~~-------- 200 (287)
T PRK14176 132 NMGKLMIGDEGLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSN--VVGKPMAAMLLNRNATVSVCH-VFTDD-------- 200 (287)
T ss_pred hhhhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCEEEEEe-ccCCC--------
Confidence 2666666544 34678999999996 899999999999999999911 01011
Q ss_pred cccceeeeccccc--cceeEEEE--cC--cCChhhhhcCCCCceeecccccCC
Q 006590 511 AQHNLVLSTSYAA--HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 511 ~~~~l~~~~~~~~--~~~~vwiv--g~--~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
+++ ++++|+|+ |+ .++++.. ++|+++||+. +..
T Consensus 201 ----------l~~~~~~ADIvv~AvG~p~~i~~~~v---k~gavVIDvG-in~ 239 (287)
T PRK14176 201 ----------LKKYTLDADILVVATGVKHLIKADMV---KEGAVIFDVG-ITK 239 (287)
T ss_pred ----------HHHHHhhCCEEEEccCCccccCHHHc---CCCcEEEEec-ccc
Confidence 221 35566553 43 4666644 9999999998 554
No 313
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.78 E-value=0.47 Score=50.47 Aligned_cols=147 Identities=23% Similarity=0.265 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 006590 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns 449 (639)
++-+.-+..-.+.|++.|+++.- |. +++..+++|.|. ++.++.= |++++ .+=|||=+
T Consensus 42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~ 121 (282)
T PRK14169 42 PASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFS 121 (282)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCC
Confidence 34455566677788999987654 43 333446788864 3555521 33232 12245543
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006590 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|+..|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ .++-
T Consensus 122 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVtichs~T--------- 190 (282)
T PRK14169 122 PVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSN--IVGRPLAGLMVNHDATVTIAHSKT--------- 190 (282)
T ss_pred hhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEECCCC---------
Confidence 3666666544 44678999999997 9999999999999999998 1111
Q ss_pred ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006590 508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 565 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 565 (639)
. ++++ +++||+| +| +.++++.. ++|+++||+. +.+. ++.-||-
T Consensus 191 -----~------~l~~~~~~ADIvI~AvG~p~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd 242 (282)
T PRK14169 191 -----R------NLKQLTKEADILVVAVGVPHFIGADAV---KPGAVVIDVG-ISRGADGKLLGDVD 242 (282)
T ss_pred -----C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCcEEEEee-ccccCCCCeeecCc
Confidence 0 1221 3566666 33 35777776 9999999998 6652 4445655
No 314
>PRK06940 short chain dehydrogenase; Provisional
Probab=89.75 E-value=0.66 Score=47.92 Aligned_cols=41 Identities=20% Similarity=0.261 Sum_probs=33.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.|+++|+ | -||+++|+.|+ +|.+|.+ |+.++.+++.+++.
T Consensus 3 k~~lItGa-~--gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~ 45 (275)
T PRK06940 3 EVVVVIGA-G--GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLR 45 (275)
T ss_pred CEEEEECC-C--hHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHH
Confidence 46788887 5 79999999997 7999998 88888877766653
No 315
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=89.72 E-value=0.5 Score=51.49 Aligned_cols=85 Identities=16% Similarity=0.224 Sum_probs=50.9
Q ss_pred EEEecccCchhhHHHHHHHHhccC-c-EEEe--cchhhHHHHHhhCccc-cccceeeecc---ccc--cceeEEE--EcC
Q 006590 466 VLLRGTVTANKVANAVASSLCQMG-I-KVAT--ICKDDYEKLKLRIPVE-AQHNLVLSTS---YAA--HKTKIWL--VGD 533 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~-~-~v~~--~~~~~~~~l~~~~~~~-~~~~l~~~~~---~~~--~~~~vwi--vg~ 533 (639)
|++.|+ | .+|+++|+.|.+++ . +|++ ||.++.+++.+++... .+..-+.+++ +++ +.++++| +|.
T Consensus 1 IlvlG~-G--~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-G--RVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---S--HHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred CEEEcC-c--HHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence 689999 9 99999999999776 4 7888 9999999998874222 2111123333 333 7778877 544
Q ss_pred cCChhhhh-cCCCCceeeccc
Q 006590 534 DLTGKEQA-RAPKGTIFIPYT 553 (639)
Q Consensus 534 ~~~~~~q~-~a~~G~~f~~~~ 553 (639)
...+.=.+ =+..|++++|.+
T Consensus 78 ~~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 78 FFGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp GGHHHHHHHHHHHT-EEEESS
T ss_pred chhHHHHHHHHHhCCCeeccc
Confidence 42221111 124588888855
No 316
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=89.66 E-value=0.85 Score=50.02 Aligned_cols=151 Identities=15% Similarity=0.121 Sum_probs=103.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccc-c-cceeEEE----EcCcC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL----VGDDL 535 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi----vg~~~ 535 (639)
.-+.|+|+|=- .+|+-||..|...|-+|.+..-|....||... .++ ++.+.+ + ...+|.| .-|.|
T Consensus 208 aGK~vVV~GYG---~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~M-dGf-----~V~~m~~Aa~~gDifiT~TGnkdVi 278 (420)
T COG0499 208 AGKNVVVAGYG---WVGRGIAMRLRGMGARVIVTEVDPIRALEAAM-DGF-----RVMTMEEAAKTGDIFVTATGNKDVI 278 (420)
T ss_pred cCceEEEeccc---ccchHHHHHhhcCCCeEEEEecCchHHHHHhh-cCc-----EEEEhHHhhhcCCEEEEccCCcCcc
Confidence 45677777765 99999999999999999996666666665542 222 355554 3 5557877 45789
Q ss_pred ChhhhhcCCCCceeecccccCCc--------------CCCCCceeecCCc---c--ccCCCCccccccccccCcchhHHH
Q 006590 536 TGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---M--IIPPSLSNMHSCENWLGRRVMSAW 596 (639)
Q Consensus 536 ~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~--~~P~~~~~~~~~e~~~p~~~~~Ac 596 (639)
+.|+.++|+.|++.|-.-.|+-+ +.|+.+.-.+.|. + .--+-+-|+. |--+.|..+|+..
T Consensus 279 ~~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~llaeGRLvNLa-~a~GHPs~VMd~S 357 (420)
T COG0499 279 RKEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLAEGRLVNLA-AATGHPSEVMDMS 357 (420)
T ss_pred CHHHHHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEecceeeeec-cCCCCcHHHhhhh
Confidence 99999999999999977654322 2333332222221 1 1222367787 8899999999999
Q ss_pred HHhhhhhhhcCCCCC---ccch--hhhhHHH
Q 006590 597 RIAGIIHALEGWDLN---ECGQ--TMCDIHQ 622 (639)
Q Consensus 597 ~a~~~v~alEgw~~~---e~G~--iv~~i~~ 622 (639)
+|--.+.+.|=|..+ |-|= +...+|+
T Consensus 358 FanQaLa~~~L~~n~~~~~~~Vy~lP~~lD~ 388 (420)
T COG0499 358 FANQALAQIYLVKNHGKLEPGVYRLPKELDE 388 (420)
T ss_pred HHHHHHHHHHHHhcccccCCceeeCcHHHHH
Confidence 999998888877766 4443 2355554
No 317
>PRK08655 prephenate dehydrogenase; Provisional
Probab=89.57 E-value=0.83 Score=51.28 Aligned_cols=83 Identities=14% Similarity=0.201 Sum_probs=54.4
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEEcCcCCh---
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLTG--- 537 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~~--- 537 (639)
+|.++|++| .+|+++|+.|.+.|.+|.+ |++++.+++..+.+... .++.++ .+++++|+--..+.
T Consensus 2 kI~IIGG~G--~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~------~~~~~e~~~~aDvVIlavp~~~~~~ 73 (437)
T PRK08655 2 KISIIGGTG--GLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY------ANDNIDAAKDADIVIISVPINVTED 73 (437)
T ss_pred EEEEEecCC--HHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee------ccCHHHHhccCCEEEEecCHHHHHH
Confidence 588999998 9999999999999999888 77777666655543221 223332 56666553211111
Q ss_pred --hh-hhcCCCCceeeccccc
Q 006590 538 --KE-QARAPKGTIFIPYTQI 555 (639)
Q Consensus 538 --~~-q~~a~~G~~f~~~~~~ 555 (639)
++ ...+++|+++++++-+
T Consensus 74 vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 74 VIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred HHHHHHhhCCCCCEEEEcccc
Confidence 12 1235789999999853
No 318
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=89.54 E-value=0.63 Score=48.90 Aligned_cols=92 Identities=12% Similarity=0.055 Sum_probs=56.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------ccc---ccceeeec-cccc-
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEA---QHNLVLST-SYAA- 523 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-------------~~~---~~~l~~~~-~~~~- 523 (639)
++|.++|+- .+|+++|..|++.|.+|.+ ++.++.++.++++. .+. ....+..+ ++++
T Consensus 5 ~~V~vIG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (295)
T PLN02545 5 KKVGVVGAG---QMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEEL 81 (295)
T ss_pred CEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHh
Confidence 569999986 9999999999999999999 77777764333211 100 00111222 3444
Q ss_pred cceeEEEE--cCcCChhh------hhcCCCCceee-cccccCCc
Q 006590 524 HKTKIWLV--GDDLTGKE------QARAPKGTIFI-PYTQIPPR 558 (639)
Q Consensus 524 ~~~~vwiv--g~~~~~~~------q~~a~~G~~f~-~~~~~~~~ 558 (639)
++++++|. -+..+-++ ...++++++++ ..|-+++.
T Consensus 82 ~~aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~i~~~ 125 (295)
T PLN02545 82 RDADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSISIT 125 (295)
T ss_pred CCCCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 77877663 11111111 12468898886 66667666
No 319
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=89.54 E-value=0.55 Score=45.94 Aligned_cols=79 Identities=13% Similarity=0.169 Sum_probs=46.5
Q ss_pred HHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 006590 451 AAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 523 (639)
Q Consensus 451 taavv~~~-----ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 523 (639)
|+..+++= ++-.-++|+++|..+ -||+-++..|.++|..|++ .+.+.++ +.+
T Consensus 19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~--~VG~Pla~lL~~~~atVt~~h~~T~~l~---~~~---------------- 77 (160)
T PF02882_consen 19 TPLAIIELLEYYGIDLEGKKVVVVGRSN--IVGKPLAMLLLNKGATVTICHSKTKNLQ---EIT---------------- 77 (160)
T ss_dssp HHHHHHHHHHHTT-STTT-EEEEE-TTT--TTHHHHHHHHHHTT-EEEEE-TTSSSHH---HHH----------------
T ss_pred CHHHHHHHHHhcCCCCCCCEEEEECCcC--CCChHHHHHHHhCCCeEEeccCCCCccc---cee----------------
Confidence 45555443 345678999999997 9999999999999999999 2111221 110
Q ss_pred cceeEEEEcCc----CChhhhhcCCCCceeeccc
Q 006590 524 HKTKIWLVGDD----LTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 524 ~~~~vwivg~~----~~~~~q~~a~~G~~f~~~~ 553 (639)
+.+||+|+.-+ ++++ +.++|+++||+.
T Consensus 78 ~~ADIVVsa~G~~~~i~~~---~ik~gavVIDvG 108 (160)
T PF02882_consen 78 RRADIVVSAVGKPNLIKAD---WIKPGAVVIDVG 108 (160)
T ss_dssp TTSSEEEE-SSSTT-B-GG---GS-TTEEEEE--
T ss_pred eeccEEeeeeccccccccc---cccCCcEEEecC
Confidence 35566663322 3443 348888888887
No 320
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.47 E-value=0.61 Score=47.60 Aligned_cols=46 Identities=17% Similarity=0.234 Sum_probs=34.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~---~~~~l~~~~ 507 (639)
..+.|+++|+++++-||+++|+.|+++|.+|.+ |+.+ +.+++++++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~ 59 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL 59 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh
Confidence 457899999983126999999999999999988 5543 345555554
No 321
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=89.45 E-value=1.3 Score=45.35 Aligned_cols=87 Identities=14% Similarity=0.132 Sum_probs=58.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccccceeEEE--EcCcCChh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL--VGDDLTGK 538 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi--vg~~~~~~ 538 (639)
...|++.|++| .+|.++++.+...|.+|.. +++++.+.+++ ++... .+.....+.....++++ +|....++
T Consensus 133 ~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~--~~~~~~~~~~~~~d~vl~~~g~~~~~~ 207 (305)
T cd08270 133 GRRVLVTGASG--GVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAE--VVVGGSELSGAPVDLVVDSVGGPQLAR 207 (305)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE--EEeccccccCCCceEEEECCCcHHHHH
Confidence 67999999998 9999999999999999877 77888888865 44321 11111111113456666 44444455
Q ss_pred hhhcCCCCceeecccc
Q 006590 539 EQARAPKGTIFIPYTQ 554 (639)
Q Consensus 539 ~q~~a~~G~~f~~~~~ 554 (639)
-.+.+++|-+++.+..
T Consensus 208 ~~~~l~~~G~~v~~g~ 223 (305)
T cd08270 208 ALELLAPGGTVVSVGS 223 (305)
T ss_pred HHHHhcCCCEEEEEec
Confidence 5567777878888763
No 322
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=89.35 E-value=0.63 Score=45.85 Aligned_cols=40 Identities=23% Similarity=0.327 Sum_probs=31.3
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~ 507 (639)
|+++|++| -||+.+|+.|+++|.+|.+ |+. ++.+.+++++
T Consensus 1 vlItG~~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 43 (239)
T TIGR01830 1 ALVTGASR--GIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL 43 (239)
T ss_pred CEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 57999998 9999999999999999888 443 4555554443
No 323
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=89.31 E-value=1.9 Score=46.94 Aligned_cols=164 Identities=15% Similarity=0.207 Sum_probs=98.5
Q ss_pred HHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006590 406 ADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 456 (639)
Q Consensus 406 A~k~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 456 (639)
+.++|.+++.|+. ++++|. |.+..-..+.|+|+ ...|+|+.|.+ +=..++.
T Consensus 68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 147 (334)
T PRK01713 68 AYDQGAQVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQSIVNELAEYAGVPVFNGLTDEFHPTQMLADVLTMI 147 (334)
T ss_pred HHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEEcCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 3689999999974 344454 35556677888886 36789998866 1246666
Q ss_pred hcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH------HHHhhCccccccceeeecccc-c-cce
Q 006590 457 NSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE------KLKLRIPVEAQHNLVLSTSYA-A-HKT 526 (639)
Q Consensus 457 ~~ip--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~------~l~~~~~~~~~~~l~~~~~~~-~-~~~ 526 (639)
+... -+..+|.++|... +.+++..+.++++-|.+|.+-.++.|+ ...++...+.+..+...++++ + +++
T Consensus 148 e~~g~~l~gl~ia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~a 226 (334)
T PRK01713 148 ENCDKPLSEISYVYIGDAR-NNMGNSLLLIGAKLGMDVRICAPKALLPEASLVEMCEKFAKESGARITVTDDIDKAVKGV 226 (334)
T ss_pred HHcCCCcCCcEEEEECCCc-cCHHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCC
Confidence 6543 2456999999973 369999999999999999993333332 111222222333312233565 4 788
Q ss_pred eEEEEcCcCChhhhhc--CCCCceeecccccCCc--C-C-CCCcee-ecCCc
Q 006590 527 KIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--K-L-RKDCFY-HSTPA 571 (639)
Q Consensus 527 ~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~--~-~-R~dc~y-~~~~a 571 (639)
+|+..+-|.+-.++.. ...-..|-+|. +..+ + . |+||.+ |.+|+
T Consensus 227 DvVyt~~w~sm~~~~~~~~~~~~~~~~y~-v~~ell~~a~k~~aivmH~lP~ 277 (334)
T PRK01713 227 DFVHTDVWVSMGEPLETWGERIKLLMPYQ-VTPELMKRTGNPKVKFMHCLPA 277 (334)
T ss_pred CEEEEcceeecccchhhHHHHHHhccCCc-CCHHHHhccCCCCCEEECCCCC
Confidence 8877655443111100 00001344553 8877 3 3 578875 77776
No 324
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.29 E-value=0.47 Score=50.81 Aligned_cols=100 Identities=20% Similarity=0.186 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 006590 393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 449 (639)
.+-+.-++..++.|++.|+++ .-|- +++..++||.|- ++.++.= |++++. +=|||=+
T Consensus 44 ~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~ 123 (296)
T PRK14188 44 PASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLH 123 (296)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCC
Confidence 345556777888999999984 4443 223336788883 3655522 333431 2245543
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
-|++.|++=+ +-.-++|.++|.++ -+|+.+|+.|.++|..|++
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~--~mG~PmA~~L~~~g~tVtv 187 (296)
T PRK14188 124 VVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSN--LVGKPMAQLLLAANATVTI 187 (296)
T ss_pred hhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCc--chHHHHHHHHHhCCCEEEE
Confidence 3566666433 44688999999998 9999999999999999999
No 325
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=89.24 E-value=0.65 Score=49.57 Aligned_cols=36 Identities=17% Similarity=0.138 Sum_probs=30.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~ 501 (639)
++|+++|++| =||+++|+.|+++|.+|+. |+++...
T Consensus 5 k~ilItGatG--~IG~~l~~~L~~~G~~V~~~~r~~~~~~ 42 (349)
T TIGR02622 5 KKVLVTGHTG--FKGSWLSLWLLELGAEVYGYSLDPPTSP 42 (349)
T ss_pred CEEEEECCCC--hhHHHHHHHHHHCCCEEEEEeCCCccch
Confidence 6799999999 9999999999999999987 5554433
No 326
>PRK06523 short chain dehydrogenase; Provisional
Probab=89.23 E-value=0.5 Score=47.67 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=30.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+++
T Consensus 8 ~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 8 AGKRALVTGGTK--GIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCCEEEEECCCC--chhHHHHHHHHHCCCEEEEEeCChh
Confidence 357899999998 9999999999999999988 5543
No 327
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=89.09 E-value=1 Score=48.05 Aligned_cols=92 Identities=13% Similarity=0.097 Sum_probs=59.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-----cc--ccceeeeccccc--cceeEEE--
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-----EA--QHNLVLSTSYAA--HKTKIWL-- 530 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~-----~~--~~~l~~~~~~~~--~~~~vwi-- 530 (639)
.+|.++|+- .+|.++|..|++.|.+|++ |++++.+.+++.-.. +. ..+....++.++ ++++++|
T Consensus 5 m~I~iIG~G---~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 5 MRVAVLGAG---AWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA 81 (328)
T ss_pred CeEEEECcC---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence 478999986 9999999999999999999 888888888764211 10 011112224543 5666655
Q ss_pred EcCcCChhhhhcCCCCceeecccc-cCCc
Q 006590 531 VGDDLTGKEQARAPKGTIFIPYTQ-IPPR 558 (639)
Q Consensus 531 vg~~~~~~~q~~a~~G~~f~~~~~-~~~~ 558 (639)
+-+.-..+-...+++|+.++.++. +.+.
T Consensus 82 v~~~~~~~v~~~l~~~~~vi~~~~Gi~~~ 110 (328)
T PRK14618 82 VPSKALRETLAGLPRALGYVSCAKGLAPD 110 (328)
T ss_pred CchHHHHHHHHhcCcCCEEEEEeeccccC
Confidence 222222333355688999999887 6654
No 328
>PLN02778 3,5-epimerase/4-reductase
Probab=89.08 E-value=0.56 Score=49.43 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=31.3
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 457 ~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
++.|+ .+.+|+++|++| =||+.+++.|.++|.+|+.
T Consensus 2 ~~~~~~~~~kiLVtG~tG--fiG~~l~~~L~~~g~~V~~ 38 (298)
T PLN02778 2 NGTAGSATLKFLIYGKTG--WIGGLLGKLCQEQGIDFHY 38 (298)
T ss_pred CCCCCCCCCeEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 45666 356899999999 9999999999999999975
No 329
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=88.99 E-value=0.57 Score=50.20 Aligned_cols=147 Identities=14% Similarity=0.142 Sum_probs=92.1
Q ss_pred cceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 006590 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 517 (639)
Q Consensus 440 L~irvv~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~ 517 (639)
.+-|++.+.+. ....+++...++|=++|=- -.|+++|.-|-+.|.+|++ |++++.+.+++.=.+-.
T Consensus 15 ~~~~~~~~~~~---~~s~~~~~s~~~iGFIGLG---~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~------ 82 (327)
T KOG0409|consen 15 FSRRLVKASET---AMSSRITPSKTRIGFIGLG---NMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVA------ 82 (327)
T ss_pred hcccccccccc---cccccCCcccceeeEEeec---cchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhh------
Confidence 44566666666 5566666667788888754 7899999999999999999 99999999987722111
Q ss_pred ecccc-ccceeE--EEEcCcCChhhhhcC--------CCCcee-ecccccCCc-------CCC-CCceeecCCccc-cCC
Q 006590 518 STSYA-AHKTKI--WLVGDDLTGKEQARA--------PKGTIF-IPYTQIPPR-------KLR-KDCFYHSTPAMI-IPP 576 (639)
Q Consensus 518 ~~~~~-~~~~~v--wivg~~~~~~~q~~a--------~~G~~f-~~~~~~~~~-------~~R-~dc~y~~~~a~~-~P~ 576 (639)
-+..+ ++++|+ -+|++....+|.--= ++|-.. +|-|-++|. +.+ +||.|.+.|+-- +++
T Consensus 83 ~sPaeVae~sDvvitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vDAPVSGg~~~ 162 (327)
T KOG0409|consen 83 NSPAEVAEDSDVVITMVPNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVDAPVSGGVKG 162 (327)
T ss_pred CCHHHHHhhcCEEEEEcCChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEeccccCCchh
Confidence 11122 134444 346666666654332 344444 888888887 233 999999999742 333
Q ss_pred CCccccccccccCcchhHHHHH
Q 006590 577 SLSNMHSCENWLGRRVMSAWRI 598 (639)
Q Consensus 577 ~~~~~~~~e~~~p~~~~~Ac~a 598 (639)
.=++.=+.=-+=++....||..
T Consensus 163 A~~G~LtimagGde~~~~~~~~ 184 (327)
T KOG0409|consen 163 AEEGTLTIMAGGDEALFEAASP 184 (327)
T ss_pred hhcCeEEEEecCcHHHHHHHHH
Confidence 2222222223334555555553
No 330
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=88.91 E-value=0.42 Score=50.68 Aligned_cols=64 Identities=13% Similarity=0.154 Sum_probs=43.7
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc---cceeEEE--EcCcCChh
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWL--VGDDLTGK 538 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~---~~~~vwi--vg~~~~~~ 538 (639)
|+++|+|| -||++++..|++.|-+|++ |+..+-+.. +....+ + ...+.. .++|+|| +|+.|-.+
T Consensus 1 IliTGgTG--lIG~~L~~~L~~~gh~v~iltR~~~~~~~~---~~~~v~-~---~~~~~~~~~~~~DavINLAG~~I~~r 71 (297)
T COG1090 1 ILITGGTG--LIGRALTARLRKGGHQVTILTRRPPKASQN---LHPNVT-L---WEGLADALTLGIDAVINLAGEPIAER 71 (297)
T ss_pred CeEecccc--chhHHHHHHHHhCCCeEEEEEcCCcchhhh---cCcccc-c---cchhhhcccCCCCEEEECCCCccccc
Confidence 57999999 9999999999999999999 666555422 111110 1 222321 3577877 88888766
No 331
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=88.90 E-value=0.58 Score=52.12 Aligned_cols=38 Identities=24% Similarity=0.263 Sum_probs=32.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
.++|+++|++| -||+++|+.|+++|.+|.. |++++.++
T Consensus 178 gK~VLITGASg--GIG~aLA~~La~~G~~Vi~l~r~~~~l~~ 217 (406)
T PRK07424 178 GKTVAVTGASG--TLGQALLKELHQQGAKVVALTSNSDKITL 217 (406)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46899999998 9999999999999999987 66666543
No 332
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=88.86 E-value=0.43 Score=51.74 Aligned_cols=66 Identities=18% Similarity=0.214 Sum_probs=54.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc--cceeEEE
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL 530 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwi 530 (639)
.....+.|||| =.|.-||++||++|.+-.| ||.++++.|.+++..+.+..=+.+- .+++ ...||++
T Consensus 6 e~d~iiYGAtG--y~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVl 76 (382)
T COG3268 6 EYDIIIYGATG--YAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVL 76 (382)
T ss_pred ceeEEEEcccc--chhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEE
Confidence 45788999999 9999999999999999988 9999999999999998876533222 2444 5557777
No 333
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.82 E-value=1.1 Score=47.89 Aligned_cols=139 Identities=19% Similarity=0.210 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 006590 393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns 449 (639)
.+-+.-++.-++.|++.|++. .-|- +++..+++|.|- ++.++.= |++++ .+=|||=|
T Consensus 45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~ 124 (285)
T PRK10792 45 PASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFH 124 (285)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccC
Confidence 345555677778899999884 3443 233336788773 3555422 22232 12234432
Q ss_pred ----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006590 450 ----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaavv~~~ip-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|++.|++-+. -..++|+++|... -||+-+|..|.++|-.|++ .++ ..
T Consensus 125 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVG~Pla~lL~~~~atVtv~hs~--T~------ 194 (285)
T PRK10792 125 PYNVGRLAQRIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASN--IVGRPMSLELLLAGCTVTVCHRF--TK------ 194 (285)
T ss_pred hhhHhHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCeEEEEECC--CC------
Confidence 36777766553 3578999999996 8999999999999999999 211 00
Q ss_pred ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006590 508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
++++ +.++++| +| +.++++.. ++|++++|+. +.+
T Consensus 195 ------------~l~~~~~~ADIvi~avG~p~~v~~~~v---k~gavVIDvG-in~ 234 (285)
T PRK10792 195 ------------NLRHHVRNADLLVVAVGKPGFIPGEWI---KPGAIVIDVG-INR 234 (285)
T ss_pred ------------CHHHHHhhCCEEEEcCCCcccccHHHc---CCCcEEEEcc-ccc
Confidence 1221 3556655 32 35666555 9999999998 555
No 334
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=88.81 E-value=1.1 Score=44.43 Aligned_cols=29 Identities=24% Similarity=0.366 Sum_probs=27.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 k~vlItG~s~--~iG~~la~~l~~~g~~vi~ 31 (245)
T PRK12824 3 KIALVTGAKR--GIGSAIARELLNDGYRVIA 31 (245)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHcCCEEEE
Confidence 5789999998 9999999999999999988
No 335
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.73 E-value=0.76 Score=48.80 Aligned_cols=147 Identities=22% Similarity=0.276 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh-
Q 006590 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS- 449 (639)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns- 449 (639)
+-+.-+..-.+.|++.|++..- |. +++.+++||.|. ++.++.= |++++. +=|||=+
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~ 124 (278)
T PRK14172 45 GSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTF 124 (278)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCH
Confidence 3344455556788888888753 32 344447788774 3555532 332331 2244432
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 006590 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (639)
Q Consensus 450 ---------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (639)
-|++.|++=+ +-.-++|+++|... -||+-+|..|-++|..|++ .++
T Consensus 125 ~n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~AtVt~chs~----------- 191 (278)
T PRK14172 125 ISVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSN--IVGKPVAQLLLNENATVTICHSK----------- 191 (278)
T ss_pred hhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCC-----------
Confidence 3566665533 44678999999997 9999999999999999999 211
Q ss_pred cccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc--CCCCCcee
Q 006590 509 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY 566 (639)
Q Consensus 509 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y 566 (639)
+. ++++ ++++|+| +| +.++++.. ++|+++||+- +++. ++--|+-+
T Consensus 192 ---T~------~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~~~gkl~GDvd~ 244 (278)
T PRK14172 192 ---TK------NLKEVCKKADILVVAIGRPKFIDEEYV---KEGAIVIDVG-TSSVNGKITGDVNF 244 (278)
T ss_pred ---CC------CHHHHHhhCCEEEEcCCCcCccCHHHc---CCCcEEEEee-ccccCCceeeeccH
Confidence 01 1222 3566766 33 35788777 9999999996 5553 45556643
No 336
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=88.66 E-value=0.94 Score=47.41 Aligned_cols=85 Identities=11% Similarity=0.119 Sum_probs=53.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc-cceeEEEEcCcCCh---
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA-HKTKIWLVGDDLTG--- 537 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~-~~~~vwivg~~~~~--- 537 (639)
+|.++| .| .+|.++|+.|.+.|.+|.. ++++..++++++-... ..+ +.++ ++++++|+--..+.
T Consensus 2 ~I~IIG-~G--~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~------~~~~~~~~~~~aDlVilavp~~~~~~ 72 (279)
T PRK07417 2 KIGIVG-LG--LIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVD------EASTDLSLLKDCDLVILALPIGLLLP 72 (279)
T ss_pred eEEEEe-ec--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcc------cccCCHhHhcCCCEEEEcCCHHHHHH
Confidence 588999 56 9999999999999999988 7777887776541100 121 2333 56777553111100
Q ss_pred --hhh-hcCCCCceeecccccCCc
Q 006590 538 --KEQ-ARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 538 --~~q-~~a~~G~~f~~~~~~~~~ 558 (639)
++. ..+++|+++++++-+++.
T Consensus 73 ~~~~l~~~l~~~~ii~d~~Svk~~ 96 (279)
T PRK07417 73 PSEQLIPALPPEAIVTDVGSVKAP 96 (279)
T ss_pred HHHHHHHhCCCCcEEEeCcchHHH
Confidence 122 234678888888766654
No 337
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.64 E-value=0.73 Score=49.36 Aligned_cols=139 Identities=18% Similarity=0.206 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 006590 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns 449 (639)
.+-+.-+...++.|++.|++.. -|- +++..+++|.|- |+.++.= |++++ .+=|||=|
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~ 123 (297)
T PRK14186 44 PASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLH 123 (297)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 3455556777788999998875 443 233336677754 3555522 33233 12245533
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006590 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|+.+|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++.+
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGkPla~lL~~~~atVtv~hs~T~-------- 193 (297)
T PRK14186 124 PLNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSI--LVGKPLALMLLAANATVTIAHSRTQ-------- 193 (297)
T ss_pred hhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCCC--------
Confidence 3566666544 34578999999997 9999999999999999998 21110
Q ss_pred ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006590 508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
++++ ++++|+| +| +.++++.. ++|+++||+. +..
T Consensus 194 ------------~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~ 233 (297)
T PRK14186 194 ------------DLASITREADILVAAAGRPNLIGAEMV---KPGAVVVDVG-IHR 233 (297)
T ss_pred ------------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 1222 3566666 34 35677766 9999999998 554
No 338
>PRK06398 aldose dehydrogenase; Validated
Probab=88.61 E-value=0.48 Score=48.28 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+++
T Consensus 6 gk~vlItGas~--gIG~~ia~~l~~~G~~Vi~~~r~~~ 41 (258)
T PRK06398 6 DKVAIVTGGSQ--GIGKAVVNRLKEEGSNVINFDIKEP 41 (258)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 36899999998 9999999999999999998 5443
No 339
>PRK08324 short chain dehydrogenase; Validated
Probab=88.57 E-value=0.84 Score=53.84 Aligned_cols=45 Identities=18% Similarity=0.177 Sum_probs=39.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++..
T Consensus 422 gk~vLVTGasg--gIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~ 468 (681)
T PRK08324 422 GKVALVTGAAG--GIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG 468 (681)
T ss_pred CCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc
Confidence 47899999998 9999999999999999988 888888887776544
No 340
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=88.46 E-value=1.2 Score=49.20 Aligned_cols=124 Identities=14% Similarity=0.130 Sum_probs=77.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--c---------cccceeeecccc-c-cceeEE
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--E---------AQHNLVLSTSYA-A-HKTKIW 529 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~--~---------~~~~l~~~~~~~-~-~~~~vw 529 (639)
+|.++|.. -+|..+|..|++ |.+|+. +++++.+++++.... | ....+...++.. + ++++++
T Consensus 2 kI~VIGlG---yvGl~~A~~lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v 77 (388)
T PRK15057 2 KITISGTG---YVGLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV 77 (388)
T ss_pred EEEEECCC---HHHHHHHHHHHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence 57888877 999999987775 999999 899999999885222 0 111111122232 2 666664
Q ss_pred E--EcCcCChh--------------hhhcCCCCceeecccccCCc---CCCCCc---eeecCCccccCCCCccccccccc
Q 006590 530 L--VGDDLTGK--------------EQARAPKGTIFIPYTQIPPR---KLRKDC---FYHSTPAMIIPPSLSNMHSCENW 587 (639)
Q Consensus 530 i--vg~~~~~~--------------~q~~a~~G~~f~~~~~~~~~---~~R~dc---~y~~~~a~~~P~~~~~~~~~e~~ 587 (639)
| |++.++.+ +...+++|.+++.-|-+||. ++++.. -...+|....|++.- -++-
T Consensus 78 ii~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l~~~~~~~~v~~~PE~l~~G~a~----~d~~ 153 (388)
T PRK15057 78 IIATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKAL----YDNL 153 (388)
T ss_pred EEeCCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHHHHHhhcCcEEECcccccCCccc----cccc
Confidence 4 66554432 22345899999999999998 332222 123366666666532 2345
Q ss_pred cCcchhHHH
Q 006590 588 LGRRVMSAW 596 (639)
Q Consensus 588 ~p~~~~~Ac 596 (639)
.|+|+|.+|
T Consensus 154 ~p~rvv~G~ 162 (388)
T PRK15057 154 HPSRIVIGE 162 (388)
T ss_pred CCCEEEEEc
Confidence 688877664
No 341
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=88.43 E-value=0.6 Score=46.58 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=27.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++| .||+++|+.|+++|.+|.+
T Consensus 6 ~~~vlitGasg--~iG~~l~~~l~~~g~~v~~ 35 (252)
T PRK06077 6 DKVVVVTGSGR--GIGRAIAVRLAKEGSLVVV 35 (252)
T ss_pred CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEE
Confidence 36899999998 9999999999999999876
No 342
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=88.37 E-value=0.85 Score=48.35 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=27.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+|+|++| -||+++++.|.++|.+|..
T Consensus 6 ~~~vlVTGatG--fiG~~l~~~L~~~G~~V~~ 35 (340)
T PLN02653 6 RKVALITGITG--QDGSYLTEFLLSKGYEVHG 35 (340)
T ss_pred CCEEEEECCCC--ccHHHHHHHHHHCCCEEEE
Confidence 35799999999 9999999999999999987
No 343
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.18 E-value=0.91 Score=48.31 Aligned_cols=163 Identities=22% Similarity=0.258 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 006590 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 449 (639)
.+-+.-+...++.|++.|+... -|. +++.+++||.|- ++.++.= |++++. +=|||=+
T Consensus 43 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~ 122 (281)
T PRK14183 43 PASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFH 122 (281)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccC
Confidence 3445556667778899998754 342 333346788773 3555522 332331 2244443
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006590 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++ -++|++
T Consensus 123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--~VG~Pla~lL~~~~AtVti~hs~--T~~l~~-- 196 (281)
T PRK14183 123 PYNVGRLVTGLDGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASN--IVGKPMAALLLNANATVDICHIF--TKDLKA-- 196 (281)
T ss_pred hhhhhHHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCC--CcCHHH--
Confidence 3667766544 44688999999997 9999999999999999998 211 111111
Q ss_pred ccccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCceeec-----CCccccC
Q 006590 508 PVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMIIP 575 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~~P 575 (639)
.+ +.++|+| +| +-++++.. ++|+++||+. +.+. ++--|+-+.+ ...+-||
T Consensus 197 ----------~~----~~ADIvV~AvGkp~~i~~~~v---k~gavvIDvG-in~~~~gkl~GDVd~~~~~~~a~~iTPVP 258 (281)
T PRK14183 197 ----------HT----KKADIVIVGVGKPNLITEDMV---KEGAIVIDIG-INRTEDGRLVGDVDFENVAKKCSYITPVP 258 (281)
T ss_pred ----------HH----hhCCEEEEecCcccccCHHHc---CCCcEEEEee-ccccCCCCeECCccHHHHHhhceEecCCC
Confidence 00 3556655 34 34677766 9999999998 6552 4445555332 1124466
Q ss_pred CCCc
Q 006590 576 PSLS 579 (639)
Q Consensus 576 ~~~~ 579 (639)
+.+.
T Consensus 259 GGVG 262 (281)
T PRK14183 259 GGVG 262 (281)
T ss_pred CCCh
Confidence 6654
No 344
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=88.15 E-value=0.76 Score=48.16 Aligned_cols=85 Identities=14% Similarity=0.199 Sum_probs=56.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEE--EcC----
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD---- 533 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~---- 533 (639)
.+|.++|. | .+|+++|+.|.+.|.+|.. |++++.+++++. .. ...+++++ ++++++| +-+
T Consensus 3 ~~IgviG~-G--~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~------~~~~~~~e~~~~~d~vi~~vp~~~~~ 72 (296)
T PRK11559 3 MKVGFIGL-G--IMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GA------ETASTAKAVAEQCDVIITMLPNSPHV 72 (296)
T ss_pred ceEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CC------eecCCHHHHHhcCCEEEEeCCCHHHH
Confidence 36899996 5 9999999999999999988 788887777653 10 11223443 5566644 211
Q ss_pred --cCChhh--hhcCCCCceeecccccCCc
Q 006590 534 --DLTGKE--QARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 534 --~~~~~~--q~~a~~G~~f~~~~~~~~~ 558 (639)
.+..++ ...+++|+++++.|.++|.
T Consensus 73 ~~v~~~~~~~~~~~~~g~iiid~st~~~~ 101 (296)
T PRK11559 73 KEVALGENGIIEGAKPGTVVIDMSSIAPL 101 (296)
T ss_pred HHHHcCcchHhhcCCCCcEEEECCCCCHH
Confidence 111111 2345889999999998885
No 345
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.14 E-value=0.8 Score=48.79 Aligned_cols=138 Identities=18% Similarity=0.234 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ecc-------cccccccccCC---ceeeecC-CCCcce------------------
Q 006590 394 AINSLIEEAILEADAKGVKVIS--LGL-------LNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (639)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~--LG~-------ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 442 (639)
+-+.-++.-++.|++.|++..- |.. ++..++||.|- ++.++.= |++++.
T Consensus 46 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~ 125 (284)
T PRK14177 46 ASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTT 125 (284)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCCh
Confidence 3444455666788888887655 322 22336677754 2444421 222331
Q ss_pred ----eeecCC----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 006590 443 ----KVVDGS----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (639)
Q Consensus 443 ----rvv~Gn----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (639)
|+..|+ .-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 126 ~n~g~l~~g~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVt~chs~T---------- 193 (284)
T PRK14177 126 LSFGKLSMGVETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSP--ILGKPMAMLLTEMNATVTLCHSKT---------- 193 (284)
T ss_pred hhHHHHHcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC----------
Confidence 222332 23666666544 33678999999998 9999999999999999999 2110
Q ss_pred cccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006590 509 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 509 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ +++||+| +| +.++++.. ++|++++|+. +..
T Consensus 194 ----~------~l~~~~~~ADIvIsAvGk~~~i~~~~i---k~gavVIDvG-in~ 234 (284)
T PRK14177 194 ----Q------NLPSIVRQADIIVGAVGKPEFIKADWI---SEGAVLLDAG-YNP 234 (284)
T ss_pred ----C------CHHHHHhhCCEEEEeCCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence 1 1221 3566666 33 34777777 9999999998 544
No 346
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=87.99 E-value=0.94 Score=49.04 Aligned_cols=83 Identities=20% Similarity=0.175 Sum_probs=57.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEE--------Ec
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------VG 532 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------vg 532 (639)
.++|-++|.- .||+++|..|..-|.+|+..++..-+..... . ......++++ +.+|+++ --
T Consensus 142 gkTvGIiG~G---~IG~~va~~l~afgm~v~~~d~~~~~~~~~~---~---~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~ 212 (324)
T COG0111 142 GKTVGIIGLG---RIGRAVAKRLKAFGMKVIGYDPYSPRERAGV---D---GVVGVDSLDELLAEADILTLHLPLTPETR 212 (324)
T ss_pred CCEEEEECCC---HHHHHHHHHHHhCCCeEEEECCCCchhhhcc---c---cceecccHHHHHhhCCEEEEcCCCCcchh
Confidence 5688889877 9999999999999999999333222211111 0 1012445555 5666644 23
Q ss_pred CcCChhhhhcCCCCceeecccc
Q 006590 533 DDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 533 ~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
..|+.++..+||+|++||-++|
T Consensus 213 g~i~~~~~a~MK~gailIN~aR 234 (324)
T COG0111 213 GLINAEELAKMKPGAILINAAR 234 (324)
T ss_pred cccCHHHHhhCCCCeEEEECCC
Confidence 4577889999999999999999
No 347
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=87.97 E-value=0.39 Score=49.86 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=29.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (639)
+|+++|++| -||+.+|+.|.++|.+|.. |+.++.
T Consensus 2 ~vlItG~~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~ 37 (328)
T TIGR03466 2 KVLVTGATG--FVGSAVVRLLLEQGEEVRVLVRPTSDR 37 (328)
T ss_pred eEEEECCcc--chhHHHHHHHHHCCCEEEEEEecCccc
Confidence 689999999 9999999999999999988 655543
No 348
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=87.95 E-value=3.1 Score=44.65 Aligned_cols=162 Identities=18% Similarity=0.224 Sum_probs=95.0
Q ss_pred HHHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHH
Q 006590 405 EADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVV 455 (639)
Q Consensus 405 ~A~k~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv 455 (639)
-|.++|.+++.|+. +.|+|.+ ....-+.+.|+|+ ..++.|+.+-+ +=+.++
T Consensus 64 A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~~D~iv~R~~~~~~~~~~a~~~~vPVINag~~~~HPtQaL~Dl~Ti 143 (304)
T PRK00779 64 GMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRYVDAIMIRTFEHETLEELAEYSTVPVINGLTDLSHPCQILADLLTI 143 (304)
T ss_pred HHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHhCCEEEEcCCChhHHHHHHHhCCCCEEeCCCCCCChHHHHHHHHHH
Confidence 35789999999964 3344544 4456677888887 34577776643 113444
Q ss_pred HhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhCccccccceeeec-cccc--cceeE
Q 006590 456 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYAA--HKTKI 528 (639)
Q Consensus 456 ~~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~~--~~~~v 528 (639)
.+.... +..+|.++|..+ .+.+..+..|.+-|.+|.+-.++.++ .+.++..++.+.. +.++ ++++ ++++|
T Consensus 144 ~e~~g~l~gl~i~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~aDv 220 (304)
T PRK00779 144 YEHRGSLKGLKVAWVGDGN--NVANSLLLAAALLGFDLRVATPKGYEPDPEIVEKIAKETGAS-IEVTHDPKEAVKGADV 220 (304)
T ss_pred HHHhCCcCCcEEEEEeCCC--ccHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHcCCe-EEEEcCHHHHhCCCCE
Confidence 444432 346899999965 89999999999999999994444432 1221111222333 3333 4553 88888
Q ss_pred EEEcCcCChhh---hhcCCCCceeecccccCCc---CCCCCce-eecCCcc
Q 006590 529 WLVGDDLTGKE---QARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 572 (639)
Q Consensus 529 wivg~~~~~~~---q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~ 572 (639)
+....|.+..+ |.... ..+-+| +++.+ ..|+|+. .|.+|+.
T Consensus 221 vy~~~w~~~~~~~~~~~~~--~~~~~y-~v~~~~l~~~~~~~ivmHplP~~ 268 (304)
T PRK00779 221 VYTDVWVSMGQEAEAEERL--KAFAPY-QVNEELMALAKPDAIFMHCLPAH 268 (304)
T ss_pred EEecCccccccchhHHHHH--HHhccc-CCCHHHHHhcCCCeEEecCCCcc
Confidence 88765544321 10000 011223 36666 4567766 4777753
No 349
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=87.83 E-value=0.88 Score=48.82 Aligned_cols=139 Identities=17% Similarity=0.211 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006590 393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 442 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 442 (639)
.+-+.-+...++.|++.|++. .-|. ++..+++||.|- |+.+..= |++++.
T Consensus 51 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~ 130 (299)
T PLN02516 51 KDSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFH 130 (299)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccC
Confidence 344555666777888888885 4453 233336677774 3555421 221221
Q ss_pred -----eeecC--C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHh
Q 006590 443 -----KVVDG--S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKL 505 (639)
Q Consensus 443 -----rvv~G--n----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~ 505 (639)
|+..| + .-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 131 ~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~--iVGkPla~lL~~~~ATVtvchs~T------- 201 (299)
T PLN02516 131 PLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSN--IVGLPVSLLLLKADATVTVVHSRT------- 201 (299)
T ss_pred HhhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCC-------
Confidence 33333 1 34667766544 44678999999997 9999999999999999999 2210
Q ss_pred hCccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCC
Q 006590 506 RIPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 506 ~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ ++++|+| +|+ .++++.. ++|++++|+. +..
T Consensus 202 -------~------nl~~~~~~ADIvv~AvGk~~~i~~~~v---k~gavVIDvG-in~ 242 (299)
T PLN02516 202 -------P------DPESIVREADIVIAAAGQAMMIKGDWI---KPGAAVIDVG-TNA 242 (299)
T ss_pred -------C------CHHHHHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEee-ccc
Confidence 1 1222 4566666 343 4566655 9999999998 544
No 350
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.83 E-value=1.3 Score=47.25 Aligned_cols=139 Identities=17% Similarity=0.223 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006590 393 EAINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 442 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 442 (639)
.+-+.-+...++.|++.|++..-.= ++..+++||.|- |+.++.= |++++.
T Consensus 38 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~ 117 (287)
T PRK14181 38 PASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLH 117 (287)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCC
Confidence 3445556777788999998875442 344457787765 3444421 222321
Q ss_pred -----eeecCC-----hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHH
Q 006590 443 -----KVVDGS-----SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEK 502 (639)
Q Consensus 443 -----rvv~Gn-----sltaavv~~~-----ip~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~ 502 (639)
|+..|+ .-|+..|++= |+-.-++|+++|... -||+-+|..|.++ +-.|++ .++.
T Consensus 118 p~n~g~l~~g~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~AtVtvchs~T---- 191 (287)
T PRK14181 118 PVNMGKLLLGETDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSN--IVGKPLAALLMQKHPDTNATVTLLHSQS---- 191 (287)
T ss_pred hhhHHHHhcCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHhCcCCCCCEEEEeCCCC----
Confidence 233344 2366666654 455689999999997 9999999999988 788888 1111
Q ss_pred HHhhCccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006590 503 LKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 503 l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
.++++ +.+||+| +| .-++++.. ++|+++||+. +.+
T Consensus 192 ----------------~~l~~~~~~ADIvV~AvG~p~~i~~~~i---k~GavVIDvG-in~ 232 (287)
T PRK14181 192 ----------------ENLTEILKTADIIIAAIGVPLFIKEEMI---AEKAVIVDVG-TSR 232 (287)
T ss_pred ----------------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 11222 4666766 44 34777777 9999999998 554
No 351
>PLN00015 protochlorophyllide reductase
Probab=87.80 E-value=0.97 Score=47.56 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=35.0
Q ss_pred EEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCc
Q 006590 467 LLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~ 508 (639)
+++|+++ -||+++|+.|+++| .+|.+ |+.++.+++.+++.
T Consensus 1 lITGas~--GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~ 43 (308)
T PLN00015 1 IITGASS--GLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG 43 (308)
T ss_pred CEeCCCC--hHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc
Confidence 4789997 99999999999999 89888 88888888877764
No 352
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=87.78 E-value=1.5 Score=39.78 Aligned_cols=86 Identities=13% Similarity=0.157 Sum_probs=48.6
Q ss_pred EEEEecccCchhhHHHHHHHHhc-cCcEEEe---cchhhHHHHHhhCcccccccee-eec--cccccceeEEE--EcCcC
Q 006590 465 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT---ICKDDYEKLKLRIPVEAQHNLV-LST--SYAAHKTKIWL--VGDDL 535 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~-~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~-~~~--~~~~~~~~vwi--vg~~~ 535 (639)
+|.++|++| .+|+.++..|.+ +++++.. +++++-+.++..-+. .++..+ ..+ .++..++++++ +++..
T Consensus 1 ki~iiG~~g--~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~ 77 (122)
T smart00859 1 KVAIVGATG--YVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPH-LKGEVVLELEPEDFEELAVDIVFLALPHGV 77 (122)
T ss_pred CEEEECCCC--hHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcc-cccccccccccCChhhcCCCEEEEcCCcHH
Confidence 478999999 999999999996 6877766 332222222222111 100101 111 12213566654 55554
Q ss_pred Chh----hhhcCCCCceeeccc
Q 006590 536 TGK----EQARAPKGTIFIPYT 553 (639)
Q Consensus 536 ~~~----~q~~a~~G~~f~~~~ 553 (639)
..+ -+..+.+|.+++|.|
T Consensus 78 ~~~~~~~~~~~~~~g~~viD~s 99 (122)
T smart00859 78 SKEIAPLLPKAAEAGVKVIDLS 99 (122)
T ss_pred HHHHHHHHHhhhcCCCEEEECC
Confidence 444 233468999999988
No 353
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=87.75 E-value=0.8 Score=50.28 Aligned_cols=140 Identities=14% Similarity=0.182 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEEe--ccc-------ccccccccCC---ceeeecC-CCCcce----------------
Q 006590 392 REAINSLIEEAILEADAKGVKVISL--GLL-------NQGEELNRNG---EIYLERQ-PNKLKI---------------- 442 (639)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~L--G~l-------n~~e~ln~~g---~~~~~k~-p~~L~i---------------- 442 (639)
..+-+.-+...++.|++.|++..-. -.- +.+++||.|- ++.++.= |++++.
T Consensus 114 dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl 193 (364)
T PLN02616 114 RKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGF 193 (364)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 3445555677788899999986543 222 2226778874 3555422 332331
Q ss_pred ------eeecC--C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHH
Q 006590 443 ------KVVDG--S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLK 504 (639)
Q Consensus 443 ------rvv~G--n----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~ 504 (639)
|+..| + .-|++.|++-+ +-.-++|+|+|... -||+-+|..|-++|-.|++ .++-
T Consensus 194 ~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~--iVGkPLa~LL~~~~ATVTicHs~T------ 265 (364)
T PLN02616 194 HPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSRT------ 265 (364)
T ss_pred ChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCeEEEeCCCC------
Confidence 23333 2 45677776655 33688999999997 9999999999999999999 2111
Q ss_pred hhCccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006590 505 LRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 505 ~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ +++||+| +| +-++++.. ++|+++||+- +.+
T Consensus 266 --------~------nl~~~~r~ADIVIsAvGkp~~i~~d~v---K~GAvVIDVG-In~ 306 (364)
T PLN02616 266 --------K------NPEEITREADIIISAVGQPNMVRGSWI---KPGAVVIDVG-INP 306 (364)
T ss_pred --------C------CHHHHHhhCCEEEEcCCCcCcCCHHHc---CCCCEEEecc-ccc
Confidence 0 1222 3566766 33 34777777 9999999997 554
No 354
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=87.72 E-value=0.56 Score=47.60 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=30.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ +++++
T Consensus 9 ~k~vlItG~s~--gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 9 GKIIIVTGGSS--GIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 46799999998 9999999999999999998 44443
No 355
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.70 E-value=0.85 Score=48.87 Aligned_cols=139 Identities=19% Similarity=0.235 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006590 393 EAINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 442 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 442 (639)
.+-+.-+...++.|++.|++..-.= +++..+++|.|- ++.++.= |++++.
T Consensus 45 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~ 124 (297)
T PRK14168 45 PASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFH 124 (297)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccC
Confidence 3455556677778899998875431 222236677774 2444421 222331
Q ss_pred -----eeecCC------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHH
Q 006590 443 -----KVVDGS------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYE 501 (639)
Q Consensus 443 -----rvv~Gn------sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~ 501 (639)
|+..|+ .-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++ +-.|++ .++-
T Consensus 125 ~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~atVtv~hs~T--- 199 (297)
T PRK14168 125 PVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSN--IVGKPIANMMTQKGPGANATVTIVHTRS--- 199 (297)
T ss_pred hhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cccHHHHHHHHhcccCCCCEEEEecCCC---
Confidence 333443 34666666544 44678999999997 9999999999988 788888 2111
Q ss_pred HHHhhCccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006590 502 KLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 502 ~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
.++++ ++++|+| +| ..++++.. ++|+++||+. ++.
T Consensus 200 -----------------~~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gavVIDvG-in~ 240 (297)
T PRK14168 200 -----------------KNLARHCQRADILIVAAGVPNLVKPEWI---KPGATVIDVG-VNR 240 (297)
T ss_pred -----------------cCHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEecC-CCc
Confidence 01222 3566766 34 35788777 9999999997 544
No 356
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=87.47 E-value=1.4 Score=41.68 Aligned_cols=65 Identities=25% Similarity=0.312 Sum_probs=42.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccccce--eeec--cccc-cceeEEEE
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNL--VLST--SYAA-HKTKIWLV 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~~~l--~~~~--~~~~-~~~~vwiv 531 (639)
+|.++||+| .||+++|..|+..+. ++.| +++++.+-...++..-..... ..+. .+++ ++++|+|+
T Consensus 2 KV~IiGa~G--~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvi 75 (141)
T PF00056_consen 2 KVAIIGAAG--NVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVI 75 (141)
T ss_dssp EEEEESTTS--HHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEE
T ss_pred EEEEECCCC--hHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEE
Confidence 789999998 999999999995554 3555 666666655544333221111 2233 3666 99988775
No 357
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=87.30 E-value=2.6 Score=45.94 Aligned_cols=165 Identities=17% Similarity=0.227 Sum_probs=101.2
Q ss_pred HHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006590 406 ADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 456 (639)
Q Consensus 406 A~k~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 456 (639)
+.++|.+++.|+. +.++|. |.+..-..+.|+|+ ..+|+|+.|-| +=+.++.
T Consensus 67 ~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 146 (334)
T PRK12562 67 AYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQ 146 (334)
T ss_pred HHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHhCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 4679999999964 333343 45666677888876 35788888754 1245666
Q ss_pred hcCc---CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHh---hCccccccceeeecccc-c-cc
Q 006590 457 NSLP---KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKL---RIPVEAQHNLVLSTSYA-A-HK 525 (639)
Q Consensus 457 ~~ip---~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~---~~~~~~~~~l~~~~~~~-~-~~ 525 (639)
+... -+..+|.++|... +.+++..+..+++-|.++.+-.++.|+ .+.+ +...+.+.++...++++ + ++
T Consensus 147 e~~g~~~l~gl~va~vGD~~-~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~ 225 (334)
T PRK12562 147 EHLPGKAFNEMTLVYAGDAR-NNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAECSALAQKHGGKITLTEDIAAGVKG 225 (334)
T ss_pred HHhCCCCcCCcEEEEECCCC-CCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCC
Confidence 6553 2357999999874 469999999888999999983333322 1111 11122233322233565 4 88
Q ss_pred eeEEEEcCcCChhhhhc--CCCCceeecccccCCc--CC--CCCcee-ecCCcc
Q 006590 526 TKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--KL--RKDCFY-HSTPAM 572 (639)
Q Consensus 526 ~~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~--~~--R~dc~y-~~~~a~ 572 (639)
++|+....|.+..+|.. ...-..|-+| |++++ +. |+||.+ |.+|+.
T Consensus 226 aDvvyt~~w~sm~~~~~~~~~~~~~~~~y-~v~~ell~~a~~~~~i~mHcLP~~ 278 (334)
T PRK12562 226 ADFIYTDVWVSMGEPKEKWAERIALLRGY-QVNSKMMALTGNPQVKFLHCLPAF 278 (334)
T ss_pred CCEEEEcCccccccchhhHHHHHHhccCC-cCCHHHHHhhcCCCCEEECCCCCC
Confidence 88888877755443311 0111245566 48888 32 688875 888873
No 358
>PRK07574 formate dehydrogenase; Provisional
Probab=87.26 E-value=0.95 Score=50.16 Aligned_cols=99 Identities=12% Similarity=0.220 Sum_probs=64.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-HHHHhhCccccccceeeeccccc--cceeEEEE-------
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-EKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~-~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------- 531 (639)
..++|.++|.- .||+++|+.|...|.+|...++.+. ....++.+. ....++++ ++++++++
T Consensus 191 ~gktVGIvG~G---~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~------~~~~~l~ell~~aDvV~l~lPlt~~ 261 (385)
T PRK07574 191 EGMTVGIVGAG---RIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGL------TYHVSFDSLVSVCDVVTIHCPLHPE 261 (385)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCc------eecCCHHHHhhcCCEEEEcCCCCHH
Confidence 35679999985 9999999999999999998222211 111112211 11234554 67777552
Q ss_pred -cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006590 532 -GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 532 -g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
-..++.+....|++|+.+|.++| ++.+ +++ -|++..+-
T Consensus 262 T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i~GAaLDV~~~EP 315 (385)
T PRK07574 262 TEHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDVWFPQP 315 (385)
T ss_pred HHHHhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCccEEEEecCCCCC
Confidence 23456788999999999999999 4332 444 57777664
No 359
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=87.23 E-value=0.5 Score=50.73 Aligned_cols=66 Identities=17% Similarity=0.290 Sum_probs=42.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcE--EEe--cchhhHHHHHhhCcccc---ccceeee-ccccc-cceeEEEE
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLKLRIPVEA---QHNLVLS-TSYAA-HKTKIWLV 531 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~--v~~--~~~~~~~~l~~~~~~~~---~~~l~~~-~~~~~-~~~~vwiv 531 (639)
+.+|.++|| | .||+++|..|+.+|.. +.| .++++.+-...++..-. ..+-+.. ++|++ ++++|+|+
T Consensus 3 ~~Ki~IiGa-G--~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvi 77 (312)
T cd05293 3 RNKVTVVGV-G--QVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIV 77 (312)
T ss_pred CCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEE
Confidence 458999997 8 9999999999977764 444 55555543333322211 1122444 35777 89988775
No 360
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=87.13 E-value=0.7 Score=50.24 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=29.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..++|+|+|+|| -||+++|+.|.++|.+|+.
T Consensus 20 ~~~~IlVtGgtG--fIG~~l~~~L~~~G~~V~~ 50 (370)
T PLN02695 20 EKLRICITGAGG--FIASHIARRLKAEGHYIIA 50 (370)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHhCCCEEEE
Confidence 567899999999 9999999999999999988
No 361
>PLN02928 oxidoreductase family protein
Probab=87.10 E-value=1.4 Score=48.13 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=59.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccce----eeeccccc--cceeEEEE--
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNL----VLSTSYAA--HKTKIWLV-- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l----~~~~~~~~--~~~~vwiv-- 531 (639)
..++|.++|.- .||+++|+.|...|.+|+. |+.++-..-...++.+.-..+ ....++++ +.+|++++
T Consensus 158 ~gktvGIiG~G---~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 158 FGKTVFILGYG---AIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 35789999985 9999999999999999988 332211100000010000000 01224544 67777663
Q ss_pred ------cCcCChhhhhcCCCCceeecccc---cCCc
Q 006590 532 ------GDDLTGKEQARAPKGTIFIPYTQ---IPPR 558 (639)
Q Consensus 532 ------g~~~~~~~q~~a~~G~~f~~~~~---~~~~ 558 (639)
-..|+.++..+|++|+++|.++| |+.+
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~ 270 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYD 270 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECCCccccCHH
Confidence 34677889999999999999998 5544
No 362
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=87.09 E-value=0.92 Score=53.63 Aligned_cols=45 Identities=16% Similarity=0.207 Sum_probs=38.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 413 ~gkvvLVTGasg--gIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~ 459 (676)
T TIGR02632 413 ARRVAFVTGGAG--GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEIN 459 (676)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH
Confidence 357899999998 9999999999999999988 88888877766643
No 363
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=87.03 E-value=2.3 Score=45.65 Aligned_cols=101 Identities=14% Similarity=0.116 Sum_probs=61.2
Q ss_pred ChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---c
Q 006590 448 SSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---S 520 (639)
Q Consensus 448 nsltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~---~ 520 (639)
+.+||+..+... .+..+.|++.|++| -||.++++.+..+|.+|.. +++++.+.++++++.+.- +... +
T Consensus 142 ~~~TA~~al~~~~~~~~g~~VlV~GaaG--~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~v---i~~~~~~~ 216 (348)
T PLN03154 142 AGFTAYAGFYEVCSPKKGDSVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA---FNYKEEPD 216 (348)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEE---EECCCccc
Confidence 344555554322 23457899999998 9999999988899999876 778888888755544221 1111 1
Q ss_pred c----cc---cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006590 521 Y----AA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 521 ~----~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+ ++ ...++++ +|.....+-...+.+|-.++-+.
T Consensus 217 ~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G 258 (348)
T PLN03154 217 LDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCG 258 (348)
T ss_pred HHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEEC
Confidence 1 11 2345555 44333334444556666666655
No 364
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=87.00 E-value=1.3 Score=47.89 Aligned_cols=86 Identities=10% Similarity=0.063 Sum_probs=53.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------cccccceeeeccccc--c
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQHNLVLSTSYAA--H 524 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-------------~~~~~~l~~~~~~~~--~ 524 (639)
+-++|.|+|+- -+|+.+|..+++.|.+|++ ++.+..+++++.+. .+....+-..+++++ +
T Consensus 6 ~i~~VaVIGaG---~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~ 82 (321)
T PRK07066 6 DIKTFAAIGSG---VIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVA 82 (321)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhc
Confidence 44689999985 8999999999999999999 66666555443221 111122223345653 7
Q ss_pred ceeEEE--EcCcCChhh------hhcCCCCceee
Q 006590 525 KTKIWL--VGDDLTGKE------QARAPKGTIFI 550 (639)
Q Consensus 525 ~~~vwi--vg~~~~~~~------q~~a~~G~~f~ 550 (639)
+++++| |-+.++-+. ...+|+++++.
T Consensus 83 ~aDlViEavpE~l~vK~~lf~~l~~~~~~~aIla 116 (321)
T PRK07066 83 DADFIQESAPEREALKLELHERISRAAKPDAIIA 116 (321)
T ss_pred CCCEEEECCcCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 887766 222222111 13578998665
No 365
>PRK08309 short chain dehydrogenase; Provisional
Probab=86.99 E-value=0.87 Score=44.90 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=33.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.|+++|+|| -+ .++++.|+++|.+|.+ |++++.+.++.+++
T Consensus 2 ~vlVtGGtG--~g-g~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~ 44 (177)
T PRK08309 2 HALVIGGTG--ML-KRVSLWLCEKGFHVSVIARREVKLENVKREST 44 (177)
T ss_pred EEEEECcCH--HH-HHHHHHHHHCcCEEEEEECCHHHHHHHHHHhh
Confidence 589999986 55 5599999999999988 88888888776554
No 366
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=86.95 E-value=1.7 Score=37.50 Aligned_cols=30 Identities=27% Similarity=0.361 Sum_probs=26.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~ 494 (639)
..+++.++|+ | .+|+.++++|++. +.++.+
T Consensus 22 ~~~~v~i~G~-G--~~g~~~a~~l~~~~~~~v~v 52 (86)
T cd05191 22 KGKTVVVLGA-G--EVGKGIAKLLADEGGKKVVL 52 (86)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEE
Confidence 4678999999 7 9999999999987 677777
No 367
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=86.73 E-value=0.62 Score=48.99 Aligned_cols=65 Identities=17% Similarity=0.205 Sum_probs=42.5
Q ss_pred EEecccCchhhHHHHHHHHhccC--cEEEecchhhHHHHHhhCccccccceeeeccccccceeEEEEcCcCChhhhhcCC
Q 006590 467 LLRGTVTANKVANAVASSLCQMG--IKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAP 544 (639)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~--~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~a~ 544 (639)
+|+|++| =||+.+++.|.++| .+|...+...-.+..+. .+....+.++.||..++++...|-
T Consensus 1 LVTGgsG--flG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~--------------~~~~~~~~~~~~Di~d~~~l~~a~ 64 (280)
T PF01073_consen 1 LVTGGSG--FLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKD--------------LQKSGVKEYIQGDITDPESLEEAL 64 (280)
T ss_pred CEEcCCc--HHHHHHHHHHHHCCCceEEEEcccccccccchh--------------hhcccceeEEEeccccHHHHHHHh
Confidence 5899999 99999999999999 56655221110000000 000022237889999999998888
Q ss_pred CCc
Q 006590 545 KGT 547 (639)
Q Consensus 545 ~G~ 547 (639)
+|+
T Consensus 65 ~g~ 67 (280)
T PF01073_consen 65 EGV 67 (280)
T ss_pred cCC
Confidence 885
No 368
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=86.65 E-value=0.92 Score=47.71 Aligned_cols=28 Identities=25% Similarity=0.300 Sum_probs=26.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+|+|+|+|| -||+++|+.|.++|.+|++
T Consensus 2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~ 29 (338)
T PRK10675 2 RVLVTGGSG--YIGSHTCVQLLQNGHDVVI 29 (338)
T ss_pred eEEEECCCC--hHHHHHHHHHHHCCCeEEE
Confidence 589999999 9999999999999999987
No 369
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=86.60 E-value=7.7 Score=42.30 Aligned_cols=167 Identities=19% Similarity=0.157 Sum_probs=98.1
Q ss_pred HHHHHHHHHHcCCcEEEeccc----cccccc-------ccCCceeeecCCC---------CcceeeecCCh---------
Q 006590 399 IEEAILEADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS--------- 449 (639)
Q Consensus 399 I~~Ai~~A~k~G~kv~~LG~l----n~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns--------- 449 (639)
-|.|+ .++|.+++-|+.= .++|.+ .+..-..+.|+|+ ..+++|+.|-+
T Consensus 64 Fe~A~---~~LGg~~i~l~~~~ss~~kgEsl~Dt~rvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL 140 (331)
T PRK02102 64 FEVAA---IDLGAHVTYLGPNDSQLGKKESIEDTARVLGRMYDGIEYRGFKQEIVEELAKYSGVPVWNGLTDEWHPTQML 140 (331)
T ss_pred HHHHH---HHcCCCEEEcCcccccCCCCcCHHHHHHHHhhcCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHH
Confidence 44444 4899999998753 344554 5666677888887 25677887644
Q ss_pred hHHHHHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHH---HH---hhCccccccceeeec-cc
Q 006590 450 LAAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEK---LK---LRIPVEAQHNLVLST-SY 521 (639)
Q Consensus 450 ltaavv~~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~---l~---~~~~~~~~~~l~~~~-~~ 521 (639)
+=+.++.+.... +..+|+++|... +.+.+..+..|++-|.+|.+-.++.++. +. ++.....+.. +.++ +.
T Consensus 141 aDl~Ti~e~~g~l~g~~va~vGd~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~ 218 (331)
T PRK02102 141 ADFMTMKEHFGPLKGLKLAYVGDGR-NNMANSLMVGGAKLGMDVRICAPKELWPEEELVALAREIAKETGAK-ITITEDP 218 (331)
T ss_pred HHHHHHHHHhCCCCCCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHHHHHcCCe-EEEEcCH
Confidence 123455554432 457999999973 3689999999999999998833333321 11 1111222333 3334 46
Q ss_pred c-c-cceeEEEEcCcCChhhhh-cCCCCceeecccccCCc--C--CCCCce-eecCCc
Q 006590 522 A-A-HKTKIWLVGDDLTGKEQA-RAPKGTIFIPYTQIPPR--K--LRKDCF-YHSTPA 571 (639)
Q Consensus 522 ~-~-~~~~vwivg~~~~~~~q~-~a~~G~~f~~~~~~~~~--~--~R~dc~-y~~~~a 571 (639)
+ + ++++|+..+.|.+-.+.. +...-..+-+| |++.+ + .++||. .|.+|+
T Consensus 219 ~ea~~~aDvvyt~~w~~~~~~~~~~~~~~~~~~y-~vt~ell~~~~~~d~ivmH~lP~ 275 (331)
T PRK02102 219 EEAVKGADVIYTDVWVSMGEEDEWEERIKLLKPY-QVNMDLMKATGNPDVIFMHCLPA 275 (331)
T ss_pred HHHhCCCCEEEEcCcccCccccchHHHHHhccCC-cCCHHHHhhhcCCCCEEECCCCC
Confidence 5 3 888887776554311100 00001223444 38877 4 368887 477776
No 370
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=86.59 E-value=0.99 Score=49.27 Aligned_cols=82 Identities=17% Similarity=0.161 Sum_probs=59.1
Q ss_pred hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 006590 450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 523 (639)
Q Consensus 450 ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 523 (639)
-|++.|++=+ +-.-++|+|+|... -||+-+|..|.++|-.|++ .++- . ++++
T Consensus 196 CTp~avi~LL~~~~i~l~GK~vvVIGRS~--iVGkPla~LL~~~~ATVTicHs~T--------------~------nl~~ 253 (345)
T PLN02897 196 CTPKGCVELLIRSGVEIAGKNAVVIGRSN--IVGLPMSLLLQRHDATVSTVHAFT--------------K------DPEQ 253 (345)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCEEEEEcCCC--------------C------CHHH
Confidence 4666666544 44688999999997 9999999999999999999 2111 0 1221
Q ss_pred --cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006590 524 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 524 --~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
+++||+| +| ..++++.. ++|+++||+. +.+
T Consensus 254 ~~~~ADIvIsAvGkp~~v~~d~v---k~GavVIDVG-in~ 289 (345)
T PLN02897 254 ITRKADIVIAAAGIPNLVRGSWL---KPGAVVIDVG-TTP 289 (345)
T ss_pred HHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence 3667766 33 34777777 9999999998 555
No 371
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=86.47 E-value=1.1 Score=45.97 Aligned_cols=110 Identities=12% Similarity=0.160 Sum_probs=64.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcE---EEe--cc----hhhH-------HHHHhhCccccccceeeecccc-c-
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK---VAT--IC----KDDY-------EKLKLRIPVEAQHNLVLSTSYA-A- 523 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~---v~~--~~----~~~~-------~~l~~~~~~~~~~~l~~~~~~~-~- 523 (639)
...+|++.||- ..|++||..|++.|++ +.+ |+ ++|- +++.++.+.. . .. .++. +
T Consensus 24 ~~~rvlvlGAG---gAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~---~-~~-~~l~~~l 95 (226)
T cd05311 24 EEVKIVINGAG---AAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPE---K-TG-GTLKEAL 95 (226)
T ss_pred cCCEEEEECch---HHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccC---c-cc-CCHHHHH
Confidence 46789999995 7999999999999985 777 55 3442 2233332111 1 11 1342 3
Q ss_pred cceeEEEE---cCcCChhhhhcCCCCceeecccccCCc-----CC-CCCc-eeecCCccccCCCCccc
Q 006590 524 HKTKIWLV---GDDLTGKEQARAPKGTIFIPYTQIPPR-----KL-RKDC-FYHSTPAMIIPPSLSNM 581 (639)
Q Consensus 524 ~~~~vwiv---g~~~~~~~q~~a~~G~~f~~~~~~~~~-----~~-R~dc-~y~~~~a~~~P~~~~~~ 581 (639)
++++++|- .--++++..+.+.++.++.|.+ -|.. +. +..| ++.++..| +|.--+|+
T Consensus 96 ~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~G~~~-~~~Q~nn~ 161 (226)
T cd05311 96 KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVATGRSD-FPNQVNNV 161 (226)
T ss_pred hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEeCCCC-Ccccccee
Confidence 55677662 2236677887777777666887 3322 12 2467 46666444 45544444
No 372
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=86.26 E-value=1.2 Score=44.98 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=35.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+|.++|++| .+|+++|+.|++.|.+|.+ |++++.++++++
T Consensus 2 kI~IIGG~G--~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTG--DQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCC--HHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 588999888 9999999999999999988 888888887765
No 373
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=86.19 E-value=0.61 Score=49.71 Aligned_cols=102 Identities=21% Similarity=0.222 Sum_probs=68.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCccccccceeeeccc-cc-cceeEEE--------E
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPVEAQHNLVLSTSY-AA-HKTKIWL--------V 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~-~~~l~~~~~~~~~~~l~~~~~~-~~-~~~~vwi--------v 531 (639)
+|.++|-- ..|...|.-|.++|.+|.+ |++++ -+.++++ +.+. ..+. ++ +.++++| |
T Consensus 2 kIafIGLG---~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~-Ga~~------a~s~~eaa~~aDvVitmv~~~~~V 71 (286)
T COG2084 2 KIAFIGLG---IMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAA-GATV------AASPAEAAAEADVVITMLPDDAAV 71 (286)
T ss_pred eEEEEcCc---hhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHc-CCcc------cCCHHHHHHhCCEEEEecCCHHHH
Confidence 57788865 8999999999999999999 77777 5555443 2222 1222 22 4555544 3
Q ss_pred cCcCCh--hhhhcCCCCceeecccccCCcCCC--------CCceeecCCccccCC
Q 006590 532 GDDLTG--KEQARAPKGTIFIPYTQIPPRKLR--------KDCFYHSTPAMIIPP 576 (639)
Q Consensus 532 g~~~~~--~~q~~a~~G~~f~~~~~~~~~~~R--------~dc~y~~~~a~~~P~ 576 (639)
.+.+.. .=...++||++|||.|-++|...| +-+.|.+-|++--+.
T Consensus 72 ~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~~ 126 (286)
T COG2084 72 RAVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGVP 126 (286)
T ss_pred HHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCch
Confidence 333332 123457899999999999998211 667788888875333
No 374
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=86.13 E-value=1.1 Score=46.98 Aligned_cols=40 Identities=25% Similarity=0.307 Sum_probs=34.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
++|.++|+. .+|+++|..|++.|.+|++ ++++.+++.++.
T Consensus 4 ~kIaViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 4 KNVTVAGAG---VLGSQIAFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred cEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 579999985 9999999999999999999 778777776654
No 375
>PLN02240 UDP-glucose 4-epimerase
Probab=86.10 E-value=1.2 Score=47.21 Aligned_cols=29 Identities=21% Similarity=0.288 Sum_probs=27.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
++|+++|+|| -||+++++.|.++|.+|+.
T Consensus 6 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~ 34 (352)
T PLN02240 6 RTILVTGGAG--YIGSHTVLQLLLAGYKVVV 34 (352)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEE
Confidence 5799999999 9999999999999999988
No 376
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=85.81 E-value=1.3 Score=45.48 Aligned_cols=28 Identities=11% Similarity=0.173 Sum_probs=25.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccC--cEEEe
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMG--IKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~~ 494 (639)
+|+++|+|| .||+++++.|.++| .+|+.
T Consensus 1 ~ilItGatG--~iG~~l~~~l~~~~~~~~v~~ 30 (317)
T TIGR01181 1 RILVTGGAG--FIGSNFVRYILNEHPDAEVIV 30 (317)
T ss_pred CEEEEcCCc--hHHHHHHHHHHHhCCCCEEEE
Confidence 489999999 99999999999877 78876
No 377
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=85.80 E-value=8 Score=42.25 Aligned_cols=162 Identities=20% Similarity=0.233 Sum_probs=94.8
Q ss_pred HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 006590 406 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV 456 (639)
Q Consensus 406 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gnsl---------taavv~ 456 (639)
+.++|.+++.|+.= +++|. |++..-+.+.|++. ..++.|+.|.+= =..++.
T Consensus 64 ~~~LGg~~i~l~~~~ss~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 143 (338)
T PRK02255 64 MTQLGGHAQYLAPGQIQLGGHESLEDTARVLSRLVDIIMARVDRHQTVVELAKYATVPVINGMSDYNHPTQELGDLFTMI 143 (338)
T ss_pred HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCcEEEEecCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 45799999998642 33343 34445566666665 346888887652 245666
Q ss_pred hcCc----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeec-ccc-c
Q 006590 457 NSLP----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYA-A 523 (639)
Q Consensus 457 ~~ip----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~-------~~l~~~~~~~~~~~l~~~~-~~~-~ 523 (639)
+..+ -+..+|.++|..+ .+++..+..|++-|.+|.+-..+.| +.+++.+ ..++.. +.++ +++ +
T Consensus 144 e~~g~g~~l~glkv~~vGD~~--~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~-~~~g~~-~~~~~d~~ea 219 (338)
T PRK02255 144 EHLPEGKKLEDCKVVFVGDAT--QVCVSLMFIATKMGMDFVHFGPKGYQLPEEHLAIAEENC-EVSGGS-VLVTDDVDEA 219 (338)
T ss_pred HHhCCCCCCCCCEEEEECCCc--hHHHHHHHHHHhCCCEEEEECCCccccCHHHHHHHHHHH-HhcCCe-EEEEcCHHHH
Confidence 6653 2356999999975 8999999999999999999333322 2222221 112233 3333 455 4
Q ss_pred -cceeEEEEcCcCChhhhhcCC-C-Cceeec-ccccCCc---CCCCCcee-ecCCcc
Q 006590 524 -HKTKIWLVGDDLTGKEQARAP-K-GTIFIP-YTQIPPR---KLRKDCFY-HSTPAM 572 (639)
Q Consensus 524 -~~~~vwivg~~~~~~~q~~a~-~-G~~f~~-~~~~~~~---~~R~dc~y-~~~~a~ 572 (639)
++++|+..+-|.+...|...+ + =..|.| | |++.+ ..++||.+ |.+|+-
T Consensus 220 v~~aDvvy~~~w~~~~~~~~~~~~r~~~~~~~y-~v~~ell~~a~~~~ivmHpLP~~ 275 (338)
T PRK02255 220 VKDADFVYTDVWYGLYDAELSEEERMAIFYPKY-QVTPELMAKAGPHAKFMHCLPAT 275 (338)
T ss_pred hCCCCEEEEcccHhhccchhhHHHHHHhhCCCc-eECHHHHhccCCCCEEeCCCCCc
Confidence 778887775554211110000 0 012233 4 47777 55688874 888863
No 378
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=85.47 E-value=2.1 Score=47.30 Aligned_cols=39 Identities=18% Similarity=0.306 Sum_probs=34.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+|+++|+ | .+|+++|+.|+++|.+|.+ +++++.++++++
T Consensus 2 ~viIiG~-G--~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~ 42 (453)
T PRK09496 2 KIIIVGA-G--QVGYTLAENLSGENNDVTVIDTDEERLRRLQDR 42 (453)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh
Confidence 6899998 6 9999999999999999998 788888888763
No 379
>PLN02527 aspartate carbamoyltransferase
Probab=85.40 E-value=6.9 Score=42.09 Aligned_cols=159 Identities=15% Similarity=0.226 Sum_probs=95.4
Q ss_pred HHHcCCcEEEecc------ccccccc-------ccCCceeeecCCC---------CcceeeecCCh----------hHHH
Q 006590 406 ADAKGVKVISLGL------LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS----------LAAA 453 (639)
Q Consensus 406 A~k~G~kv~~LG~------ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns----------ltaa 453 (639)
+.++|.+++.|+. +.++|.+ ++..-+.+.|+|+ ...+.|+.+-+ .=+.
T Consensus 61 ~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ~LaDl~ 140 (306)
T PLN02527 61 MKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGYSDIIVLRHFESGAARRAAATAEIPVINAGDGPGQHPTQALLDVY 140 (306)
T ss_pred HHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHhCcEEEEECCChhHHHHHHHhCCCCEEECCCCCCCChHHHHHHHH
Confidence 4589999999965 2345554 6677788889986 35688887622 1245
Q ss_pred HHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCccccccceeeec-ccc-c-cc
Q 006590 454 VVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-HK 525 (639)
Q Consensus 454 vv~~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~-~-~~ 525 (639)
++.+.... +..+|+++|..+-+.+.+..+..|++. |.++.+-.++.|+ .+.+++. +.+.+ +.++ +.+ + ++
T Consensus 141 Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~~a~~~ 218 (306)
T PLN02527 141 TIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKMKDDIKDYLT-SKGVE-WEESSDLMEVASK 218 (306)
T ss_pred HHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCCCHHHHHHHH-HcCCE-EEEEcCHHHHhCC
Confidence 56555432 457999999863137899999998886 9999883343332 2222221 23333 3344 565 4 88
Q ss_pred eeEEEEcCcCChhhhhcCCCCcee----ecccccCCc---CCCCCce-eecCC
Q 006590 526 TKIWLVGDDLTGKEQARAPKGTIF----IPYTQIPPR---KLRKDCF-YHSTP 570 (639)
Q Consensus 526 ~~vwivg~~~~~~~q~~a~~G~~f----~~~~~~~~~---~~R~dc~-y~~~~ 570 (639)
++|+.. +.++.|+.. .+-..+ =+| |++.+ ..|+||. .|.+|
T Consensus 219 aDvvyt-~~~q~e~~~--~~~~~~~~~~~~y-~v~~~ll~~a~~~~ivmHclP 267 (306)
T PLN02527 219 CDVLYQ-TRIQRERFG--ERIDLYEAARGKY-IVDKKVMDVLPKHAVVMHPLP 267 (306)
T ss_pred CCEEEE-CCcchhhhc--chHHHHHHhCCCc-eECHHHHhccCCCCEEECCCC
Confidence 988887 555533210 000111 123 37766 4567774 56666
No 380
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=85.40 E-value=1.1 Score=50.52 Aligned_cols=66 Identities=17% Similarity=0.186 Sum_probs=45.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhcc-------Cc--EEEe--cchhhHHHHHhhCccccc---cceeeec--cccc-cc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQM-------GI--KVAT--ICKDDYEKLKLRIPVEAQ---HNLVLST--SYAA-HK 525 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~-------~~--~v~~--~~~~~~~~l~~~~~~~~~---~~l~~~~--~~~~-~~ 525 (639)
.-+|.++||+| .||+++|..|+.+ ++ ++.+ +++++.+-...++..... .+ +.++ +|++ ++
T Consensus 100 ~~KV~IIGAaG--~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~-v~i~~~~ye~~kd 176 (444)
T PLN00112 100 LINVAVSGAAG--MISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLRE-VSIGIDPYEVFQD 176 (444)
T ss_pred CeEEEEECCCc--HHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCc-eEEecCCHHHhCc
Confidence 45899999998 9999999999977 66 4555 777777755555433221 12 3333 4776 88
Q ss_pred eeEEEE
Q 006590 526 TKIWLV 531 (639)
Q Consensus 526 ~~vwiv 531 (639)
++|+|+
T Consensus 177 aDiVVi 182 (444)
T PLN00112 177 AEWALL 182 (444)
T ss_pred CCEEEE
Confidence 888664
No 381
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=85.39 E-value=2.8 Score=46.35 Aligned_cols=110 Identities=19% Similarity=0.305 Sum_probs=70.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--cc-----------ccceeeeccccc--ccee
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EA-----------QHNLVLSTSYAA--HKTK 527 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~--~~-----------~~~l~~~~~~~~--~~~~ 527 (639)
+|.++|.. .+|.++|..|++.|.+|+. +++++.+.|++.... +. ..++...+++++ ++++
T Consensus 2 kI~vIGlG---~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad 78 (411)
T TIGR03026 2 KIAVIGLG---YVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD 78 (411)
T ss_pred EEEEECCC---chhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence 58899975 9999999999999999999 888999988764211 00 112222334543 5666
Q ss_pred EEE--EcCcCCh-------------hhh-hcCCCCceeecccccCCc---CC-------------CCCceeecCCccccC
Q 006590 528 IWL--VGDDLTG-------------KEQ-ARAPKGTIFIPYTQIPPR---KL-------------RKDCFYHSTPAMIIP 575 (639)
Q Consensus 528 vwi--vg~~~~~-------------~~q-~~a~~G~~f~~~~~~~~~---~~-------------R~dc~y~~~~a~~~P 575 (639)
++| |++...+ ++. ..+++|++++.-|-+||. ++ ..||.+..+|..-.|
T Consensus 79 vvii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~~~g~~~~~d~~v~~~Pe~~~~ 158 (411)
T TIGR03026 79 VIIICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILERASGLKLGEDFYLAYNPEFLRE 158 (411)
T ss_pred EEEEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHhhcCCCCCCCceEEECCCcCCC
Confidence 543 6654321 111 235889999998877776 12 136666777766666
Q ss_pred CC
Q 006590 576 PS 577 (639)
Q Consensus 576 ~~ 577 (639)
+.
T Consensus 159 G~ 160 (411)
T TIGR03026 159 GN 160 (411)
T ss_pred CC
Confidence 65
No 382
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=85.27 E-value=1.5 Score=48.69 Aligned_cols=45 Identities=18% Similarity=0.303 Sum_probs=36.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c--chhhHHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~--~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| -||+++|+.|+++|.+|++ + +.++++++.++++
T Consensus 209 ~g~~vlItGasg--gIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~ 257 (450)
T PRK08261 209 AGKVALVTGAAR--GIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG 257 (450)
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC
Confidence 457899999998 9999999999999999998 3 3456677766654
No 383
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=85.23 E-value=1.1 Score=45.10 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=30.0
Q ss_pred cccCchhhHHHHHHHHhccCcEEEe--cchhh----HHHHHhhCc
Q 006590 470 GTVTANKVANAVASSLCQMGIKVAT--ICKDD----YEKLKLRIP 508 (639)
Q Consensus 470 Gatg~~kig~ava~~L~~~~~~v~~--~~~~~----~~~l~~~~~ 508 (639)
|++..+-||++||+.|+++|.+|++ |++++ ++++.++.+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~ 45 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG 45 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC
Confidence 4552238999999999999999999 77776 556665544
No 384
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=85.22 E-value=2.7 Score=43.67 Aligned_cols=55 Identities=25% Similarity=0.225 Sum_probs=41.3
Q ss_pred hhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 449 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 449 sltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
-+||+-.+... .+....|++.|++| .+|.++++.+...|.+|.. +++++.+.+++
T Consensus 128 ~~ta~~al~~~~~~~~g~~vlI~ga~g--~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~ 186 (329)
T cd08294 128 GLTAYFGLLEICKPKAGETVVVNGAAG--AVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE 186 (329)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 34554444322 23457899999998 9999999988899999876 78888888876
No 385
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=85.10 E-value=1.4 Score=46.56 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=64.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-cceeEEE--EcCc-CCh
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD-LTG 537 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--vg~~-~~~ 537 (639)
+|.++|. | .+|.++|+.|.+.|.+|.+ |++++.++++++-.... .. ..++. . +++++++ +-+. +++
T Consensus 2 ~Ig~IGl-G--~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~-~s---~~~~~~~~~~~dvIi~~vp~~~~~~ 74 (298)
T TIGR00872 2 QLGLIGL-G--RMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGV-AN---LRELSQRLSAPRVVWVMVPHGIVDA 74 (298)
T ss_pred EEEEEcc-h--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCccc-CC---HHHHHhhcCCCCEEEEEcCchHHHH
Confidence 5889996 5 9999999999999999998 89999998887521111 00 11222 1 3455543 2111 111
Q ss_pred --hh-hhcCCCCceeecccccCCcC--C------CCCceeecCCccc
Q 006590 538 --KE-QARAPKGTIFIPYTQIPPRK--L------RKDCFYHSTPAMI 573 (639)
Q Consensus 538 --~~-q~~a~~G~~f~~~~~~~~~~--~------R~dc~y~~~~a~~ 573 (639)
++ ....++|.++++.+-.+|.. . ++.+.|.+.|++-
T Consensus 75 v~~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vda~vsG 121 (298)
T TIGR00872 75 VLEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSG 121 (298)
T ss_pred HHHHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEecCCCC
Confidence 11 22357899999998766551 1 1466788877664
No 386
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.09 E-value=1.5 Score=47.10 Aligned_cols=138 Identities=22% Similarity=0.299 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh-
Q 006590 394 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS- 449 (639)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns- 449 (639)
+-+.-+....+.|++.|++.. -|. +++.++++|.|- ++.+..= |++++ .+=|||=+
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~ 123 (297)
T PRK14167 44 ASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHP 123 (297)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 444556667778889998764 343 333446788774 4555522 22233 12244443
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHHHH
Q 006590 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLK 504 (639)
Q Consensus 450 ---------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~l~ 504 (639)
-|+..|++=+ +-.-++|+++|... -||+-+|..|.++ +..|++ .++-
T Consensus 124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T------ 195 (297)
T PRK14167 124 ENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSD--IVGKPMANLLIQKADGGNATVTVCHSRT------ 195 (297)
T ss_pred hhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--ccHHHHHHHHhcCccCCCCEEEEeCCCC------
Confidence 4666666544 44678999999997 9999999999987 788888 2111
Q ss_pred hhCccccccceeeeccccc--cceeEEEE--cC--cCChhhhhcCCCCceeecccccCC
Q 006590 505 LRIPVEAQHNLVLSTSYAA--HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 505 ~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~--~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ +.++|+|+ |+ .++++.. ++|+++||+. +..
T Consensus 196 --------~------~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gaiVIDvG-in~ 236 (297)
T PRK14167 196 --------D------DLAAKTRRADIVVAAAGVPELIDGSML---SEGATVIDVG-INR 236 (297)
T ss_pred --------C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence 0 1222 35667663 53 5788777 9999999998 554
No 387
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=85.01 E-value=1.5 Score=43.92 Aligned_cols=45 Identities=22% Similarity=0.343 Sum_probs=34.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh--HHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~--~~~l~~~~~ 508 (639)
..+.|+++|+++ -||+++|+.|+++|.+|++ ++.++ .+.+.+...
T Consensus 4 ~~~~ilITGas~--GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~ 52 (251)
T COG1028 4 SGKVALVTGASS--GIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK 52 (251)
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH
Confidence 457899999996 8999999999999999776 44443 455554433
No 388
>PRK12367 short chain dehydrogenase; Provisional
Probab=84.94 E-value=1.2 Score=45.69 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=29.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 497 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~ 497 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |++
T Consensus 14 ~k~~lITGas~--gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 14 GKRIGITGASG--ALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEECCc
Confidence 46899999998 9999999999999999987 554
No 389
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=84.68 E-value=2.9 Score=49.19 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=27.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~ 494 (639)
..++|+|+|+|| =||+.+++.|.++ |.+|..
T Consensus 314 ~~~~VLVTGatG--FIGs~Lv~~Ll~~~g~~V~~ 345 (660)
T PRK08125 314 RRTRVLILGVNG--FIGNHLTERLLRDDNYEVYG 345 (660)
T ss_pred cCCEEEEECCCc--hHHHHHHHHHHhCCCcEEEE
Confidence 367899999999 9999999999975 789987
No 390
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=84.66 E-value=2.4 Score=43.43 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=32.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
.++.++|+. .+|+.+|+-|.++|..|++ +++++.++
T Consensus 1 m~iiIiG~G---~vG~~va~~L~~~g~~Vv~Id~d~~~~~~ 38 (225)
T COG0569 1 MKIIIIGAG---RVGRSVARELSEEGHNVVLIDRDEERVEE 38 (225)
T ss_pred CEEEEECCc---HHHHHHHHHHHhCCCceEEEEcCHHHHHH
Confidence 368889988 9999999999999999999 88888776
No 391
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=84.64 E-value=1.2 Score=44.55 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=28.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 7 ~~k~vlItGas~--~iG~~la~~l~~~G~~v~~ 37 (252)
T PRK08220 7 SGKTVWVTGAAQ--GIGYAVALAFVEAGAKVIG 37 (252)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 346899999998 9999999999999999998
No 392
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=84.54 E-value=1 Score=44.59 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=27.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 5 ~k~~lVtGas~--~iG~~ia~~l~~~G~~v~~ 34 (235)
T PRK06550 5 TKTVLITGAAS--GIGLAQARAFLAQGAQVYG 34 (235)
T ss_pred CCEEEEcCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 46799999998 9999999999999999988
No 393
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=84.26 E-value=1.4 Score=47.60 Aligned_cols=120 Identities=17% Similarity=0.169 Sum_probs=81.3
Q ss_pred ccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006590 424 ELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (639)
Q Consensus 424 ~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~ 501 (639)
.-||+.++...=-|. -...+|.+.|.- -+|.--|+....-|-+|++ +|-+|+.
T Consensus 151 k~~GG~GvllgGvpG----------------------V~~~kv~iiGGG---vvgtnaAkiA~glgA~Vtild~n~~rl~ 205 (371)
T COG0686 151 KTNGGKGVLLGGVPG----------------------VLPAKVVVLGGG---VVGTNAAKIAIGLGADVTILDLNIDRLR 205 (371)
T ss_pred hccCCceeEecCCCC----------------------CCCccEEEECCc---cccchHHHHHhccCCeeEEEecCHHHHh
Confidence 367777666665555 134568888876 7899999999999999999 9999999
Q ss_pred HHHhhCccccccceeeecc--ccc--cceeEEE---------EcCcCChhhhhcCCCCceeecccccCCc----CCC---
Q 006590 502 KLKLRIPVEAQHNLVLSTS--YAA--HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR----KLR--- 561 (639)
Q Consensus 502 ~l~~~~~~~~~~~l~~~~~--~~~--~~~~vwi---------vg~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R--- 561 (639)
.|...-... .....++. +++ ..+|++| .=+-++.|.++.|+||++.+|++ ++.- ..|
T Consensus 206 ~ldd~f~~r--v~~~~st~~~iee~v~~aDlvIgaVLIpgakaPkLvt~e~vk~MkpGsVivDVA-iDqGGc~Et~~~TT 282 (371)
T COG0686 206 QLDDLFGGR--VHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAPKLVTREMVKQMKPGSVIVDVA-IDQGGCFETSHPTT 282 (371)
T ss_pred hhhHhhCce--eEEEEcCHHHHHHHhhhccEEEEEEEecCCCCceehhHHHHHhcCCCcEEEEEE-EcCCCceecccccc
Confidence 887763332 12123442 443 4555544 22456778899999999999999 6664 223
Q ss_pred -CCceeecCCc
Q 006590 562 -KDCFYHSTPA 571 (639)
Q Consensus 562 -~dc~y~~~~a 571 (639)
+|=+|.+-+.
T Consensus 283 h~~PtY~~~gv 293 (371)
T COG0686 283 HDDPTYEVDGV 293 (371)
T ss_pred CCCCceeecCE
Confidence 5555655554
No 394
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=84.18 E-value=2.7 Score=44.51 Aligned_cols=103 Identities=16% Similarity=0.102 Sum_probs=66.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cc---eeEEE--EcCc-
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HK---TKIWL--VGDD- 534 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~---~~vwi--vg~~- 534 (639)
+|-++|. | .+|+++|+.|.+.|.+|++ |++++.+.+++. .... ..+.++ +. +++++ +-+.
T Consensus 2 ~Ig~IGl-G--~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~------~~s~~~~~~~~~~advVi~~vp~~~ 71 (299)
T PRK12490 2 KLGLIGL-G--KMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-GITA------RHSLEELVSKLEAPRTIWVMVPAGE 71 (299)
T ss_pred EEEEEcc-c--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CCee------cCCHHHHHHhCCCCCEEEEEecCch
Confidence 4778884 4 9999999999999999988 888888887653 2111 112332 11 44544 2221
Q ss_pred -CCh--hhh-hcCCCCceeecccccCCc-------CC-CCCceeecCCccccCCC
Q 006590 535 -LTG--KEQ-ARAPKGTIFIPYTQIPPR-------KL-RKDCFYHSTPAMIIPPS 577 (639)
Q Consensus 535 -~~~--~~q-~~a~~G~~f~~~~~~~~~-------~~-R~dc~y~~~~a~~~P~~ 577 (639)
+.. ++. ..+++|.++|+.|.++|. ++ ++.+.|.+.|.+--|..
T Consensus 72 ~~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vdapV~G~~~~ 126 (299)
T PRK12490 72 VTESVIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVWG 126 (299)
T ss_pred HHHHHHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEeCCCCCCHHH
Confidence 111 122 235789999999988876 11 26788999888865543
No 395
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=84.18 E-value=0.8 Score=46.67 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=28.7
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (639)
|+++|++| -||+++++.|.++|.+|.. |+.+..
T Consensus 1 vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~ 35 (292)
T TIGR01777 1 ILITGGTG--FIGRALTQRLTKDGHEVTILTRSPPAG 35 (292)
T ss_pred CEEEcccc--hhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence 68999999 9999999999999999987 655543
No 396
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=84.10 E-value=1.6 Score=42.89 Aligned_cols=27 Identities=22% Similarity=0.397 Sum_probs=25.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
|+++|||| =||+++++.|.++|.+|+.
T Consensus 1 IlI~GatG--~iG~~l~~~l~~~g~~v~~ 27 (236)
T PF01370_consen 1 ILITGATG--FIGSALVRQLLKKGHEVIV 27 (236)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTTEEEE
T ss_pred EEEEccCC--HHHHHHHHHHHHcCCcccc
Confidence 78999999 9999999999999999665
No 397
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=84.09 E-value=3.9 Score=36.38 Aligned_cols=39 Identities=23% Similarity=0.285 Sum_probs=32.9
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
|+++|.. .+|+.+++.|-+.+.+|++ +++++.++++++-
T Consensus 1 vvI~G~g---~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~ 41 (116)
T PF02254_consen 1 VVIIGYG---RIGREIAEQLKEGGIDVVVIDRDPERVEELREEG 41 (116)
T ss_dssp EEEES-S---HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT
T ss_pred eEEEcCC---HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc
Confidence 6789987 9999999999998888888 8888888887763
No 398
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=84.07 E-value=1.7 Score=44.59 Aligned_cols=44 Identities=18% Similarity=0.288 Sum_probs=39.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+|+++|.++ -||++.|..+.+-|-+|.+ |+++++++.+.+.|.
T Consensus 6 nTiLITGG~s--GIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~ 51 (245)
T COG3967 6 NTILITGGAS--GIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE 51 (245)
T ss_pred cEEEEeCCcc--hhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc
Confidence 3679998874 8999999999999999999 999999999998665
No 399
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=84.04 E-value=1.9 Score=43.74 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=35.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
....|++.|++| .+|.++++.+...|.++.+ +++++.+.+++
T Consensus 139 ~~~~vlv~g~~~--~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 182 (323)
T cd05276 139 AGETVLIHGGAS--GVGTAAIQLAKALGARVIATAGSEEKLEACRA 182 (323)
T ss_pred CCCEEEEEcCcC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 356899999997 9999999999999999887 77777777743
No 400
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=83.84 E-value=1.7 Score=46.30 Aligned_cols=64 Identities=20% Similarity=0.306 Sum_probs=43.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc---ccc-eeeeccccc-cceeEEEE
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHN-LVLSTSYAA-HKTKIWLV 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~---~~~-l~~~~~~~~-~~~~vwiv 531 (639)
+|.++|+ | .+|+++|..|+++|. ++.+ +++++.+.+..++.... ..+ .+....+++ ++++++|+
T Consensus 2 kI~IIGa-G--~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIi 74 (306)
T cd05291 2 KVVIIGA-G--HVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVI 74 (306)
T ss_pred EEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence 6899997 6 899999999999895 5676 77787777766653322 111 122234555 88888664
No 401
>PRK13243 glyoxylate reductase; Reviewed
Probab=83.75 E-value=2 Score=46.46 Aligned_cols=97 Identities=8% Similarity=0.087 Sum_probs=64.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEE------
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------ 531 (639)
..++|.++|- | .||+.+|+.|...|.+|.. ++.+... ..+.. +...++++ ++++++++
T Consensus 149 ~gktvgIiG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~-------~~~~~l~ell~~aDiV~l~lP~t~ 216 (333)
T PRK13243 149 YGKTIGIIGF-G--RIGQAVARRAKGFGMRILYYSRTRKPEA--EKELG-------AEYRPLEELLRESDFVSLHVPLTK 216 (333)
T ss_pred CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcC-------CEecCHHHHHhhCCEEEEeCCCCh
Confidence 4678999998 5 9999999999999999988 3322211 11111 11224443 56666552
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecCC
Q 006590 532 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP 570 (639)
Q Consensus 532 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~ 570 (639)
-..++.+....+++|++++.++| ++.+ +++ -|++..+-+
T Consensus 217 ~T~~~i~~~~~~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gAaLDV~~~EP~ 272 (333)
T PRK13243 217 ETYHMINEERLKLMKPTAILVNTARGKVVDTKALVKALKEGWIAGAGLDVFEEEPY 272 (333)
T ss_pred HHhhccCHHHHhcCCCCeEEEECcCchhcCHHHHHHHHHcCCeEEEEeccCCCCCC
Confidence 23456688899999999999999 4443 222 488877643
No 402
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=83.71 E-value=2.3 Score=44.05 Aligned_cols=86 Identities=16% Similarity=0.195 Sum_probs=58.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--c----cc---c-cceeEE
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YA---A-HKTKIW 529 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~---~-~~~~vw 529 (639)
....|++.|++| .||.++++.+...|.++.. ++.++.+.+++. +.+ .++... + ++ . +..+++
T Consensus 139 ~g~~vlI~g~~g--~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~-g~~---~~~~~~~~~~~~~i~~~~~~~~~d~v 212 (324)
T cd08292 139 PGQWLIQNAAGG--AVGKLVAMLAAARGINVINLVRRDAGVAELRAL-GIG---PVVSTEQPGWQDKVREAAGGAPISVA 212 (324)
T ss_pred CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhc-CCC---EEEcCCCchHHHHHHHHhCCCCCcEE
Confidence 356899999998 9999999988899999877 677777777653 321 112111 1 11 1 345676
Q ss_pred E--EcCcCChhhhhcCCCCceeeccc
Q 006590 530 L--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 530 i--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+ +|.....+-.+.++++..|+.+.
T Consensus 213 ~d~~g~~~~~~~~~~l~~~g~~v~~g 238 (324)
T cd08292 213 LDSVGGKLAGELLSLLGEGGTLVSFG 238 (324)
T ss_pred EECCCChhHHHHHHhhcCCcEEEEEe
Confidence 6 55545555566777888888886
No 403
>PLN02858 fructose-bisphosphate aldolase
Probab=83.41 E-value=1.7 Score=55.56 Aligned_cols=176 Identities=13% Similarity=0.101 Sum_probs=104.1
Q ss_pred cccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccc-cc-cc-cCCceee---ecC-CCCcceeeecC-----------
Q 006590 386 YNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQG-EE-LN-RNGEIYL---ERQ-PNKLKIKVVDG----------- 447 (639)
Q Consensus 386 y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~-e~-ln-~~g~~~~---~k~-p~~L~irvv~G----------- 447 (639)
|.-.|..+-+.|-+.-|...|++.|+..-...+..+. ++ .+ |.|+.-. .|. .+.-.+++.+-
T Consensus 234 ~~~~F~l~l~~KDl~la~~~A~~~g~~lpl~~~a~~~~~~a~~~G~g~~D~sav~~~~~~~~g~~~~~~~~~~~~~~~~~ 313 (1378)
T PLN02858 234 YIEGRFLNVLVQNLGIVLDMAKSLPFPLPLLAVAHQQLISGSSSMQGDDTATSLAKVWEKVFGVNILEAANRELYKPEDL 313 (1378)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHcCCCccccccccccChHHH
Confidence 3334556677788999999999999987655544443 11 11 1121100 000 00000122222
Q ss_pred -ChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc-
Q 006590 448 -SSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 523 (639)
Q Consensus 448 -nsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~- 523 (639)
.-+|.+ ||..++|-++|-- .+|+++|+.|.+.|.+|.. |+.++.+.++++-. ....+.++
T Consensus 314 ~~~~~~~------~~~~~~IGfIGlG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga-------~~~~s~~e~ 377 (1378)
T PLN02858 314 AKQITMQ------AKPVKRIGFIGLG---AMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGG-------LAGNSPAEV 377 (1378)
T ss_pred HHHhhcc------ccCCCeEEEECch---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-------eecCCHHHH
Confidence 222222 3456789999855 9999999999999999998 88888888876511 01223332
Q ss_pred -cceeEEE--EcC------cCC-hh-hhhcCCCCceeecccccCCcC---C-------CCCceeecCCccccCCC
Q 006590 524 -HKTKIWL--VGD------DLT-GK-EQARAPKGTIFIPYTQIPPRK---L-------RKDCFYHSTPAMIIPPS 577 (639)
Q Consensus 524 -~~~~vwi--vg~------~~~-~~-~q~~a~~G~~f~~~~~~~~~~---~-------R~dc~y~~~~a~~~P~~ 577 (639)
+++++++ |.+ .+. +. -...+++|.++++.|-++|.. + ++++.|.+.|.+--|..
T Consensus 378 ~~~aDvVi~~V~~~~~v~~Vl~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lDAPVsGg~~~ 452 (1378)
T PLN02858 378 AKDVDVLVIMVANEVQAENVLFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVKR 452 (1378)
T ss_pred HhcCCEEEEecCChHHHHHHHhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEccCCCChhh
Confidence 5566644 321 111 11 123458999999999988872 2 26888999998766553
No 404
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=83.41 E-value=2.6 Score=42.73 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=53.1
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecc-hhhHHHHHhh-Cccccc--cceeeec-cccc--cceeEEEE-
Q 006590 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC-KDDYEKLKLR-IPVEAQ--HNLVLST-SYAA--HKTKIWLV- 531 (639)
Q Consensus 460 p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~-~~~~~~l~~~-~~~~~~--~~l~~~~-~~~~--~~~~vwiv- 531 (639)
+-.-++|+++|... -||+-+|..|.++|-.|++-+ ..-+..-+.. +..+.. .+ .+ .+++ +.++|+|+
T Consensus 59 ~l~GK~vvVIGrS~--iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~---~~~~l~~~~~~ADIVIsA 133 (197)
T cd01079 59 RLYGKTITIINRSE--VVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTD---EEAMTLDCLSQSDVVITG 133 (197)
T ss_pred CCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccc---hhhHHHHHhhhCCEEEEc
Confidence 45688999999997 999999999999999999821 1111100000 001110 01 00 1333 56777774
Q ss_pred -cC--c-CChhhhhcCCCCceeeccc
Q 006590 532 -GD--D-LTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 532 -g~--~-~~~~~q~~a~~G~~f~~~~ 553 (639)
|+ - ++++.. ++|+++||+.
T Consensus 134 vG~~~~~i~~d~i---k~GavVIDVG 156 (197)
T cd01079 134 VPSPNYKVPTELL---KDGAICINFA 156 (197)
T ss_pred cCCCCCccCHHHc---CCCcEEEEcC
Confidence 33 2 566655 9999999998
No 405
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=82.94 E-value=2.6 Score=48.53 Aligned_cols=41 Identities=24% Similarity=0.395 Sum_probs=36.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+.+|.+||.. ++|+.+|+.|.++|.++++ .|+|+.++++++
T Consensus 417 ~~hiiI~G~G---~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~ 459 (558)
T PRK10669 417 CNHALLVGYG---RVGSLLGEKLLAAGIPLVVIETSRTRVDELRER 459 (558)
T ss_pred CCCEEEECCC---hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC
Confidence 6789999998 9999999999999999988 888888888754
No 406
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=82.93 E-value=8.4 Score=40.89 Aligned_cols=28 Identities=14% Similarity=0.164 Sum_probs=25.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+|.++|+- .+|+++|+.|++.|.+|.+
T Consensus 5 m~I~iiG~G---~~G~~lA~~l~~~G~~V~~ 32 (308)
T PRK14619 5 KTIAILGAG---AWGSTLAGLASANGHRVRV 32 (308)
T ss_pred CEEEEECcc---HHHHHHHHHHHHCCCEEEE
Confidence 468999986 9999999999999999999
No 407
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=82.87 E-value=1.9 Score=45.51 Aligned_cols=40 Identities=13% Similarity=0.287 Sum_probs=35.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
++|.++|+. .+|+++|..|.+.|.+|++ +++++.++++++
T Consensus 5 ~~I~vIGaG---~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 5 QNLAIIGAG---TMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred cEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 579999996 9999999999999999999 788888888764
No 408
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=82.80 E-value=2.8 Score=43.52 Aligned_cols=101 Identities=18% Similarity=0.123 Sum_probs=61.6
Q ss_pred hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee--ecc
Q 006590 450 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL--STS 520 (639)
Q Consensus 450 ltaavv~~~ip-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~--~~~ 520 (639)
+||+..++.+. ++...|++.|++| .+|.++++.+..+|.+|.. +++++.+.+++ ++.+.-.+.-. ...
T Consensus 129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~ 205 (326)
T cd08289 129 FTAALSIHRLEENGLTPEQGPVLVTGATG--GVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKEVIPREELQEES 205 (326)
T ss_pred HHHHHHHHHHHhcCCCCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCEEEcchhHHHHH
Confidence 34555554432 2456899999998 9999999999999999887 78888888854 43321111000 001
Q ss_pred ccc---cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006590 521 YAA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 521 ~~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+++ ..+++++ +|.....+-....+++-+++.+.
T Consensus 206 ~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g 243 (326)
T cd08289 206 IKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSG 243 (326)
T ss_pred HHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEe
Confidence 111 3356666 33333334455667777788876
No 409
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=82.66 E-value=5.6 Score=44.87 Aligned_cols=166 Identities=17% Similarity=0.243 Sum_probs=99.0
Q ss_pred HHHHHHHHHHcCCcEEEecc-----cccccc-------cccCCceeeecCCC---------CcceeeecCCh--------
Q 006590 399 IEEAILEADAKGVKVISLGL-----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS-------- 449 (639)
Q Consensus 399 I~~Ai~~A~k~G~kv~~LG~-----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns-------- 449 (639)
-|.|+ .++|.+++.|+. +.++|. |++..-+.+.|+|+ ..+|.|+.|-+
T Consensus 144 FE~A~---~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y~D~IviR~~~~~~~~e~A~~s~vPVINAgdg~~~HPtQ 220 (429)
T PRK11891 144 FGAAF---CRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGYVDALVIRHPEQGSVAEFARATNLPVINGGDGPGEHPSQ 220 (429)
T ss_pred HHHHH---HHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHhCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHH
Confidence 45554 489999999954 344554 45667788888876 46789998643
Q ss_pred --hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCccccccceeee
Q 006590 450 --LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLS 518 (639)
Q Consensus 450 --ltaavv~~~ip-----~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~ 518 (639)
+=..++.+... -+..+|+++|...-+.+++..+..||+. |.+|.+-..+.|+ .+.+++. +.+.. +.+
T Consensus 221 aLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~~~~~~~~~~~~-~~G~~-v~~ 298 (429)
T PRK11891 221 ALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTLEMPAYIVEQIS-RNGHV-IEQ 298 (429)
T ss_pred HHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCccccCHHHHHHHH-hcCCe-EEE
Confidence 22556666542 2357999999972238899999999976 9999883444332 2222211 12333 333
Q ss_pred c-ccc-c-cceeEEEEcCcCChhhhhcCCCCceeecccccCCc---C-CCCCce-eecCCc
Q 006590 519 T-SYA-A-HKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR---K-LRKDCF-YHSTPA 571 (639)
Q Consensus 519 ~-~~~-~-~~~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~---~-~R~dc~-y~~~~a 571 (639)
+ +++ + ++++|+...- +..|+......-..+-+| |++.+ . .++||. .|.+|+
T Consensus 299 ~~d~~eav~~ADVVYt~~-~q~er~~~~~~~~~~~~y-~vt~ell~~~ak~dai~MHcLPr 357 (429)
T PRK11891 299 TDDLAAGLRGADVVYATR-IQKERFADESFEGYTPDF-QINQALVDAVCKPDTLIMHPLPR 357 (429)
T ss_pred EcCHHHHhCCCCEEEEcC-chhhcccCHHHHHhccCC-cCCHHHHhCccCCCcEEECCCCC
Confidence 3 455 4 8888888743 332222100001123344 38877 3 467877 567885
No 410
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=82.65 E-value=2.6 Score=48.52 Aligned_cols=100 Identities=20% Similarity=0.224 Sum_probs=65.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEEE--------
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------- 531 (639)
..++|.++|-- .||+++|+.|...|.+|...++..-.+-..+...+ .+.++++ ++++++++
T Consensus 137 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~------~~~~l~ell~~aDvV~l~lPlt~~T 207 (525)
T TIGR01327 137 YGKTLGVIGLG---RIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGVE------LVDDLDELLARADFITVHTPLTPET 207 (525)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCE------EcCCHHHHHhhCCEEEEccCCChhh
Confidence 45789999975 99999999999999999883221101101111111 1234554 66776552
Q ss_pred cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecCC
Q 006590 532 GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP 570 (639)
Q Consensus 532 g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~ 570 (639)
-..++.+....|++|++++.++| ++.+ +++ -|++..+-|
T Consensus 208 ~~li~~~~l~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gAaLDVf~~EP~ 261 (525)
T TIGR01327 208 RGLIGAEELAKMKKGVIIVNCARGGIIDEAALYEALEEGHVRAAALDVFEKEPP 261 (525)
T ss_pred ccCcCHHHHhcCCCCeEEEEcCCCceeCHHHHHHHHHcCCeeEEEEecCCCCCC
Confidence 23456788999999999999999 4433 444 677776643
No 411
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=82.58 E-value=3.5 Score=44.65 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=61.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEEcCc---
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD--- 534 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~--- 534 (639)
..++|.++|.- .||+++|+.|...|.+|.. ++.+..... + ....++++ ++++++++--.
T Consensus 145 ~g~~VgIIG~G---~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~---~--------~~~~~l~ell~~aDiVil~lP~t~ 210 (330)
T PRK12480 145 KNMTVAIIGTG---RIGAATAKIYAGFGATITAYDAYPNKDLDF---L--------TYKDSVKEAIKDADIISLHVPANK 210 (330)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEeCChhHhhhh---h--------hccCCHHHHHhcCCEEEEeCCCcH
Confidence 34579999975 9999999999999999999 333221100 0 01224543 66666553333
Q ss_pred -----CChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006590 535 -----LTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 535 -----~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
+..+....+++|++++.++| ++.. +++ -|++..+-
T Consensus 211 ~t~~li~~~~l~~mk~gavlIN~aRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP 265 (330)
T PRK12480 211 ESYHLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEA 265 (330)
T ss_pred HHHHHHhHHHHhcCCCCcEEEEcCCccccCHHHHHHHHHcCCeeEEEEeccCCCC
Confidence 34467788999999999999 5544 222 47776664
No 412
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=82.51 E-value=1.5 Score=47.43 Aligned_cols=25 Identities=8% Similarity=0.203 Sum_probs=22.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGI 490 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~ 490 (639)
-+|.++||+| .||+++|..|+.+++
T Consensus 4 ~KV~IIGa~G--~VG~~~a~~l~~~~~ 28 (323)
T TIGR01759 4 VRVAVTGAAG--QIGYSLLFRIASGEL 28 (323)
T ss_pred eEEEEECCCc--HHHHHHHHHHHhCCc
Confidence 3799999999 999999999997776
No 413
>PLN02996 fatty acyl-CoA reductase
Probab=82.49 E-value=1.4 Score=50.02 Aligned_cols=25 Identities=12% Similarity=0.272 Sum_probs=22.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQM 488 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~ 488 (639)
+.+.|+|+|+|| -||++++..|.+.
T Consensus 10 ~~k~VlvTGaTG--FlG~~ll~~LL~~ 34 (491)
T PLN02996 10 ENKTILVTGATG--FLAKIFVEKILRV 34 (491)
T ss_pred CCCeEEEeCCCc--HHHHHHHHHHHhh
Confidence 456899999999 9999999998864
No 414
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=82.41 E-value=1.4 Score=48.42 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=32.6
Q ss_pred hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecch
Q 006590 457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (639)
Q Consensus 457 ~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~ 497 (639)
+.++++..+|.++|.+| .+|..+|+.|.+.|..|.+.+.
T Consensus 92 ~~~~~~~~~I~IiGG~G--lmG~slA~~l~~~G~~V~~~d~ 130 (374)
T PRK11199 92 KTLNPDLRPVVIVGGKG--QLGRLFAKMLTLSGYQVRILEQ 130 (374)
T ss_pred cccCcccceEEEEcCCC--hhhHHHHHHHHHCCCeEEEeCC
Confidence 34445667899999999 9999999999999999999443
No 415
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=82.30 E-value=4.3 Score=42.94 Aligned_cols=86 Identities=13% Similarity=0.217 Sum_probs=53.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEEEcCcCCh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLTG 537 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~~ 537 (639)
.+|.++| +| .+|.++|+.|.+.|. +|.. +++++.+.+++. +... . ..++.++ ++++++|+--....
T Consensus 7 ~~I~IIG-~G--~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~-g~~~--~--~~~~~~~~~~~aDvViiavp~~~ 78 (307)
T PRK07502 7 DRVALIG-IG--LIGSSLARAIRRLGLAGEIVGADRSAETRARAREL-GLGD--R--VTTSAAEAVKGADLVILCVPVGA 78 (307)
T ss_pred cEEEEEe-eC--HHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhC-CCCc--e--ecCCHHHHhcCCCEEEECCCHHH
Confidence 4799999 56 999999999998885 6776 777777766543 1100 0 1123332 67777664222111
Q ss_pred -----hhh-hcCCCCceeecccccCC
Q 006590 538 -----KEQ-ARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 538 -----~~q-~~a~~G~~f~~~~~~~~ 557 (639)
++. ..+++|+++++++-+..
T Consensus 79 ~~~v~~~l~~~l~~~~iv~dvgs~k~ 104 (307)
T PRK07502 79 SGAVAAEIAPHLKPGAIVTDVGSVKA 104 (307)
T ss_pred HHHHHHHHHhhCCCCCEEEeCccchH
Confidence 112 23578888888876543
No 416
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=82.29 E-value=1.5 Score=47.45 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=21.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGI 490 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~ 490 (639)
+|.++||+| .||+.+|..|+.+|+
T Consensus 2 KV~IiGAaG--~VG~~~a~~L~~~~~ 25 (323)
T cd00704 2 HVLITGAAG--QIGYNLLFLIASGEL 25 (323)
T ss_pred EEEEECCCc--HHHHHHHHHHHhCCc
Confidence 689999999 999999999997664
No 417
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=82.15 E-value=4 Score=41.76 Aligned_cols=100 Identities=15% Similarity=0.071 Sum_probs=59.7
Q ss_pred hHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccc----cee-eecc
Q 006590 450 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH----NLV-LSTS 520 (639)
Q Consensus 450 ltaavv~~~ip--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~----~l~-~~~~ 520 (639)
+||+..++.+- +....|++.|++| .+|.++++.+..+|.+|.. +++++.+.++ +++.+.-. .+. .+..
T Consensus 128 ~ta~~~l~~~~~~~~g~~vlV~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~i~~ 204 (320)
T cd08243 128 YTAWGSLFRSLGLQPGDTLLIRGGTS--SVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVIDDGAIAEQLRA 204 (320)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEecCccHHHHHHH
Confidence 44555554442 2357999999998 9999999999999999877 6777777774 33321100 000 0111
Q ss_pred ccccceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006590 521 YAAHKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 521 ~~~~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+ .+..++++ +|.....+-.+..+++-+|+.+.
T Consensus 205 ~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g 238 (320)
T cd08243 205 A-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTG 238 (320)
T ss_pred h-CCCceEEEECCChHHHHHHHHHhccCCEEEEEc
Confidence 1 12345555 33333344455666777777766
No 418
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=82.08 E-value=4.2 Score=42.79 Aligned_cols=84 Identities=7% Similarity=0.147 Sum_probs=52.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhCccccccceeeeccccc--cceeEEE-----
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----- 530 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~----~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----- 530 (639)
.+|.++|. | .+|.++++.|.+.|. ++.. |++++.++++++.+.+. .++.++ ++++++|
T Consensus 3 ~~IgfIG~-G--~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~------~~~~~e~~~~aDiIiLavkP 73 (272)
T PRK12491 3 KQIGFIGC-G--NMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITI------TTNNNEVANSADILILSIKP 73 (272)
T ss_pred CeEEEECc-c--HHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEE------eCCcHHHHhhCCEEEEEeCh
Confidence 46899994 4 999999999998774 5666 77888888876543211 123333 5666655
Q ss_pred --EcCcCChhhhh-cCCCCceeecccc-cCCc
Q 006590 531 --VGDDLTGKEQA-RAPKGTIFIPYTQ-IPPR 558 (639)
Q Consensus 531 --vg~~~~~~~q~-~a~~G~~f~~~~~-~~~~ 558 (639)
+.+.+ ++.. ..++|++++++.- ++-+
T Consensus 74 ~~~~~vl--~~l~~~~~~~~lvISi~AGi~i~ 103 (272)
T PRK12491 74 DLYSSVI--NQIKDQIKNDVIVVTIAAGKSIK 103 (272)
T ss_pred HHHHHHH--HHHHHhhcCCcEEEEeCCCCcHH
Confidence 22222 1221 1456788888875 4444
No 419
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=82.05 E-value=2.2 Score=45.43 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..+.++++|+...+-||+|+|+.|+++|-+|.+
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv 39 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILV 39 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEE
Confidence 456789999951148999999999999999999
No 420
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=81.91 E-value=4.8 Score=44.63 Aligned_cols=80 Identities=15% Similarity=0.026 Sum_probs=55.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEEEc-------
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------- 532 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg------- 532 (639)
..++|-++|.- .||+.+|+.|..-|.+|...+..+-+ . .+. ....++++ +.++++++-
T Consensus 115 ~gktvGIIG~G---~IG~~va~~l~a~G~~V~~~Dp~~~~---~---~~~----~~~~~l~ell~~aDiV~lh~Plt~~g 181 (381)
T PRK00257 115 AERTYGVVGAG---HVGGRLVRVLRGLGWKVLVCDPPRQE---A---EGD----GDFVSLERILEECDVISLHTPLTKEG 181 (381)
T ss_pred CcCEEEEECCC---HHHHHHHHHHHHCCCEEEEECCcccc---c---ccC----ccccCHHHHHhhCCEEEEeCcCCCCc
Confidence 46789999985 99999999999999999983321100 0 000 11224444 566665522
Q ss_pred -----CcCChhhhhcCCCCceeecccc
Q 006590 533 -----DDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 533 -----~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
.-++.+...++++|+++|-.+|
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~aR 208 (381)
T PRK00257 182 EHPTRHLLDEAFLASLRPGAWLINASR 208 (381)
T ss_pred cccccccCCHHHHhcCCCCeEEEECCC
Confidence 2356678999999999999999
No 421
>PLN00016 RNA-binding protein; Provisional
Probab=81.79 E-value=1.4 Score=47.87 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=32.4
Q ss_pred cCCCcEEEEe----cccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006590 460 PKTTAHVLLR----GTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 460 p~~~~~V~~~----Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
....++|+|+ |+|| -||+.+++.|.++|.+|+. |+++.
T Consensus 49 ~~~~~~VLVt~~~~GatG--~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHA--FIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred ccccceEEEEeccCCCce--eEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 3456789999 9999 9999999999999999998 65543
No 422
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=81.63 E-value=1.3 Score=47.50 Aligned_cols=97 Identities=15% Similarity=0.205 Sum_probs=62.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEEEc--------
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-------- 532 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-------- 532 (639)
.++|.++|-- +||+++|+.|..-|.+|...+..+ +..+ +.... ....++++ ++++++++-
T Consensus 136 g~tvgIvG~G---~IG~~vA~~l~afG~~V~~~~~~~-----~~~~-~~~~~-~~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 136 DFTIGILGAG---VLGSKVAQSLQTWGFPLRCWSRSR-----KSWP-GVQSF-AGREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCC-----CCCC-Cceee-cccccHHHHHhcCCEEEECCCCCHHHH
Confidence 4688899876 999999999999999998822211 0000 10000 11223544 677776632
Q ss_pred CcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006590 533 DDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 533 ~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
..++.+...++++|++++.++| |+.+ ++| -|++..+-
T Consensus 206 ~li~~~~l~~mk~ga~lIN~aRG~vVde~aL~~aL~~g~i~gaalDVf~~EP 257 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFSREP 257 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECCCccccCHHHHHHHHhcCCeeeEEecCCCCCC
Confidence 2345567889999999999999 5544 344 47777663
No 423
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=81.62 E-value=2.2 Score=50.94 Aligned_cols=42 Identities=12% Similarity=0.124 Sum_probs=35.4
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006590 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 460 p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (639)
|++-++|.|+||- -+|+.||..+++.|++|++ .+.+.+++-+
T Consensus 310 ~~~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~ 353 (714)
T TIGR02437 310 AKDVKQAAVLGAG---IMGGGIAYQSASKGTPIVMKDINQHSLDLGL 353 (714)
T ss_pred ccccceEEEECCc---hHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 4567789999998 8999999999999999999 7777766543
No 424
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=81.41 E-value=16 Score=39.86 Aligned_cols=168 Identities=19% Similarity=0.228 Sum_probs=99.5
Q ss_pred HHHHHHHHHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh---------
Q 006590 399 IEEAILEADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS--------- 449 (639)
Q Consensus 399 I~~Ai~~A~k~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns--------- 449 (639)
-|.|+ .++|.+++.|+. +.++|. |++..-+.+.|+|+ ..+++|+.|.+
T Consensus 63 Fe~A~---~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iviR~~~~~~~~~~a~~s~vPVINa~~~~~HPtQaL 139 (332)
T PRK04284 63 FEVAA---YDQGAHVTYLGPTGSQMGKKESTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVL 139 (332)
T ss_pred HHHHH---HHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEecCchHHHHHHHHhCCCCEEECCCCCCChHHHH
Confidence 45554 569999999965 344554 45566677888887 35688988754
Q ss_pred hHHHHHHhcC-c-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeecc
Q 006590 450 LAAAVVVNSL-P-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLSTS 520 (639)
Q Consensus 450 ltaavv~~~i-p-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~-------~~l~~~~~~~~~~~l~~~~~ 520 (639)
+=+.++.+.. . -+..+|+++|... +.+++..+.+|++-|.++.+-.++.+ ++.++ ...+.+......++
T Consensus 140 ~Dl~Ti~e~~~g~l~g~kia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~-~~~~~g~~~~~~~d 217 (332)
T PRK04284 140 ADFLTAKEHLKKPYKDIKFTYVGDGR-NNVANALMQGAAIMGMDFHLVCPKELNPDDELLNKCKE-IAAETGGKITITDD 217 (332)
T ss_pred HHHHHHHHHhcCCcCCcEEEEecCCC-cchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHH-HHHHcCCeEEEEcC
Confidence 1245666663 2 2457999999862 37999999999999999999333322 22221 11223333122335
Q ss_pred cc-c-cceeEEEEcCcCChhhhhc--CCCCceeecccccCCc---CCC-CCce-eecCCcc
Q 006590 521 YA-A-HKTKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR---KLR-KDCF-YHSTPAM 572 (639)
Q Consensus 521 ~~-~-~~~~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~---~~R-~dc~-y~~~~a~ 572 (639)
++ + ++++|+..+.|.+..+... ...-..|-+| |++++ ..+ +|+. .|.+|+.
T Consensus 218 ~~ea~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~~y-~v~~e~l~~a~~~~~ivmHplP~~ 277 (332)
T PRK04284 218 IDEGVKGSDVIYTDVWVSMGEPDEVWEERIKLLKPY-QVNKEMMKKTGNPNAIFEHCLPSF 277 (332)
T ss_pred HHHHhCCCCEEEECCcccCccchhhHHHHHHhccCC-cCCHHHHhhcCCCCcEEECCCCCC
Confidence 65 4 7888877765543221000 0000123344 37777 345 4776 5788864
No 425
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=81.40 E-value=3.1 Score=44.88 Aligned_cols=139 Identities=20% Similarity=0.256 Sum_probs=76.3
Q ss_pred HcCCcEEEeccc-ccc---cccccCCceeeecCCCCcceeeecCChh-----HHHHHHhc---CcCCCcEEEEecccCch
Q 006590 408 AKGVKVISLGLL-NQG---EELNRNGEIYLERQPNKLKIKVVDGSSL-----AAAVVVNS---LPKTTAHVLLRGTVTAN 475 (639)
Q Consensus 408 k~G~kv~~LG~l-n~~---e~ln~~g~~~~~k~p~~L~irvv~Gnsl-----taavv~~~---ip~~~~~V~~~Gatg~~ 475 (639)
+-|=+|+.+|.. ..+ |-.+-..+..+ +.|++|. ....-++ ||+..+.+ +.. ..+|++.||+|
T Consensus 80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~-~~P~~ls--~~eAAal~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaG-- 153 (326)
T COG0604 80 KVGDRVAALGGVGRDGGYAEYVVVPADWLV-PLPDGLS--FEEAAALPLAGLTAWLALFDRAGLKP-GETVLVHGAAG-- 153 (326)
T ss_pred CCCCEEEEccCCCCCCcceeEEEecHHHce-eCCCCCC--HHHHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEecCCc--
Confidence 577788887511 011 33333332333 3365222 2233333 77777777 222 67899999998
Q ss_pred hhHHHHHHHHhccCcEEE-e-cchhhHHHHHhhCccccccc-----ee-eeccccc-cceeEEE--EcCcCChhhhhcCC
Q 006590 476 KVANAVASSLCQMGIKVA-T-ICKDDYEKLKLRIPVEAQHN-----LV-LSTSYAA-HKTKIWL--VGDDLTGKEQARAP 544 (639)
Q Consensus 476 kig~ava~~L~~~~~~v~-~-~~~~~~~~l~~~~~~~~~~~-----l~-~~~~~~~-~~~~vwi--vg~~~~~~~q~~a~ 544 (639)
-||++..+.+...|..+. . .+.++.+ +.+++....-.+ ++ ++..+.. +..++++ ||...-.+-.....
T Consensus 154 gVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~ 232 (326)
T COG0604 154 GVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALA 232 (326)
T ss_pred hHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhc
Confidence 999999999999984433 3 6677777 445555433222 12 1222211 3467766 55544444444445
Q ss_pred CCceeeccc
Q 006590 545 KGTIFIPYT 553 (639)
Q Consensus 545 ~G~~f~~~~ 553 (639)
+|-.++-+-
T Consensus 233 ~~G~lv~ig 241 (326)
T COG0604 233 PGGRLVSIG 241 (326)
T ss_pred cCCEEEEEe
Confidence 555555544
No 426
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=81.25 E-value=1.3 Score=47.81 Aligned_cols=25 Identities=8% Similarity=0.199 Sum_probs=22.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGI 490 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~ 490 (639)
.+|.++||+| .||+.+|..|+.+|+
T Consensus 3 ~KV~IiGa~G--~VG~~~a~~l~~~~~ 27 (322)
T cd01338 3 VRVAVTGAAG--QIGYSLLFRIASGEM 27 (322)
T ss_pred eEEEEECCCc--HHHHHHHHHHHhccc
Confidence 4799999998 999999999997777
No 427
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=81.11 E-value=3.1 Score=45.19 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=48.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHh---hCccccccceeeeccccccceeEEEEcCcCC
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL---RIPVEAQHNLVLSTSYAAHKTKIWLVGDDLT 536 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~---~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~ 536 (639)
...|+|+|+.| =||+.++..|-++|..|++ .+...+++|++ -..+. .......||..|
T Consensus 2 ~~~VLVtGgaG--yiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~--------------~~v~f~~~Dl~D 65 (343)
T KOG1371|consen 2 GKHVLVTGGAG--YIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEG--------------KSVFFVEGDLND 65 (343)
T ss_pred CcEEEEecCCc--ceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCC--------------CceEEEEeccCC
Confidence 46899999999 9999999999999999999 22333444432 22221 112356677777
Q ss_pred hhhhhcCC---CCceeeccc
Q 006590 537 GKEQARAP---KGTIFIPYT 553 (639)
Q Consensus 537 ~~~q~~a~---~G~~f~~~~ 553 (639)
.+-+++.- ++..++-|+
T Consensus 66 ~~~L~kvF~~~~fd~V~Hfa 85 (343)
T KOG1371|consen 66 AEALEKLFSEVKFDAVMHFA 85 (343)
T ss_pred HHHHHHHHhhcCCceEEeeh
Confidence 77665432 344444444
No 428
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=80.80 E-value=3.2 Score=48.72 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=38.9
Q ss_pred CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006590 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 459 ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+++.+++|.++|.. .+|+.+|+.|.++|+++++ .|+++.++++++
T Consensus 396 ~~~~~~~vII~G~G---r~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~ 442 (621)
T PRK03562 396 IDEQQPRVIIAGFG---RFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF 442 (621)
T ss_pred cccccCcEEEEecC---hHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc
Confidence 33446789999998 9999999999999999988 888899988764
No 429
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=80.71 E-value=5 Score=44.46 Aligned_cols=84 Identities=17% Similarity=0.102 Sum_probs=58.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEEEcC------
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD------ 533 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~------ 533 (639)
..++|-++|.- .||+++|+.|..-|.+|+..++.+-+ + +.. ....++++ +.++|+++--
T Consensus 115 ~gktvGIIG~G---~IG~~vA~~l~a~G~~V~~~dp~~~~----~---~~~---~~~~~L~ell~~sDiI~lh~PLt~~g 181 (378)
T PRK15438 115 HDRTVGIVGVG---NVGRRLQARLEALGIKTLLCDPPRAD----R---GDE---GDFRSLDELVQEADILTFHTPLFKDG 181 (378)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCcccc----c---ccc---cccCCHHHHHhhCCEEEEeCCCCCCc
Confidence 57899999985 99999999999999999994322111 0 110 11234554 5676655222
Q ss_pred ------cCChhhhhcCCCCceeecccc---cCCc
Q 006590 534 ------DLTGKEQARAPKGTIFIPYTQ---IPPR 558 (639)
Q Consensus 534 ------~~~~~~q~~a~~G~~f~~~~~---~~~~ 558 (639)
-++.++..++++|+++|..+| |+.+
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~aRG~vVDe~ 215 (378)
T PRK15438 182 PYKTLHLADEKLIRSLKPGAILINACRGAVVDNT 215 (378)
T ss_pred ccccccccCHHHHhcCCCCcEEEECCCchhcCHH
Confidence 356788899999999999999 5554
No 430
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=80.65 E-value=2.5 Score=50.69 Aligned_cols=41 Identities=10% Similarity=0.167 Sum_probs=34.1
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006590 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (639)
..-++|.|+||- -+|+.||..+++.|++|++ ++++.+++..
T Consensus 333 ~~i~~v~ViGaG---~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~~ 375 (737)
T TIGR02441 333 RPVKTLAVLGAG---LMGAGIAQVSVDKGLKTVLKDATPAGLDRGQ 375 (737)
T ss_pred CcccEEEEECCC---HhHHHHHHHHHhCCCcEEEecCCHHHHHHHH
Confidence 355789999995 9999999999999999999 6777666533
No 431
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=80.64 E-value=5.6 Score=45.76 Aligned_cols=90 Identities=16% Similarity=0.190 Sum_probs=62.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-ccc-----------eeeec-cc-----
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-QHN-----------LVLST-SY----- 521 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~-~~~-----------l~~~~-~~----- 521 (639)
..++|+|.|+- -+|...+..+...|-+|.. ++.+|++..++ ++.+. ..+ ....+ .+
T Consensus 164 pg~kVlViGaG---~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 164 PPAKVLVIGAG---VAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCCEEEEECCc---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 37799999998 8999999999999998887 78888886655 34331 000 00011 11
Q ss_pred ---cc--cceeEEEEcCc---------CChhhhhcCCCCceeecccccC
Q 006590 522 ---AA--HKTKIWLVGDD---------LTGKEQARAPKGTIFIPYTQIP 556 (639)
Q Consensus 522 ---~~--~~~~vwivg~~---------~~~~~q~~a~~G~~f~~~~~~~ 556 (639)
.+ +.+|++|-... ++++..+.+++|.++++++ ++
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg-~~ 287 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLA-AE 287 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEc-cC
Confidence 11 35788883333 3788999999999999999 65
No 432
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=80.37 E-value=1.9 Score=39.62 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=26.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKD 498 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~ 498 (639)
+.++++|++| -||+++++.|+++|. .|.+ |+++
T Consensus 1 ~~~li~Ga~~--~iG~~~~~~l~~~g~~~v~~~~r~~~ 36 (180)
T smart00822 1 GTYLITGGLG--GLGLELARWLAERGARHLVLLSRSGP 36 (180)
T ss_pred CEEEEEcCCC--hHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence 3689999998 999999999999886 4555 5443
No 433
>PRK05442 malate dehydrogenase; Provisional
Probab=80.34 E-value=1.6 Score=47.22 Aligned_cols=26 Identities=8% Similarity=0.204 Sum_probs=22.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGI 490 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~ 490 (639)
-.+|.++||+| .||+.+|..|+.+|+
T Consensus 4 ~~KV~IiGaaG--~VG~~~a~~l~~~~~ 29 (326)
T PRK05442 4 PVRVAVTGAAG--QIGYSLLFRIASGDM 29 (326)
T ss_pred CcEEEEECCCc--HHHHHHHHHHHhhhh
Confidence 34899999998 999999999997666
No 434
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=79.98 E-value=3.8 Score=41.84 Aligned_cols=30 Identities=27% Similarity=0.283 Sum_probs=26.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..++|++.|- | .||+.+|+.|.++|.+++.
T Consensus 22 ~g~~vaIqGf-G--nVG~~~a~~L~~~G~~vV~ 51 (217)
T cd05211 22 EGLTVAVQGL-G--NVGWGLAKKLAEEGGKVLA 51 (217)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCEEEE
Confidence 4679999996 5 9999999999999887666
No 435
>PRK07201 short chain dehydrogenase; Provisional
Probab=79.89 E-value=4 Score=47.27 Aligned_cols=28 Identities=14% Similarity=0.178 Sum_probs=25.8
Q ss_pred EEEEecccCchhhHHHHHHHHh--ccCcEEEe
Q 006590 465 HVLLRGTVTANKVANAVASSLC--QMGIKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~--~~~~~v~~ 494 (639)
+|+|+|+|| -||+.+++.|. ++|.+|..
T Consensus 2 ~ILVTGatG--fIG~~lv~~Ll~~~~g~~V~~ 31 (657)
T PRK07201 2 RYFVTGGTG--FIGRRLVSRLLDRRREATVHV 31 (657)
T ss_pred eEEEeCCcc--HHHHHHHHHHHhcCCCCEEEE
Confidence 599999999 99999999998 68888887
No 436
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=79.77 E-value=8.3 Score=43.02 Aligned_cols=91 Identities=14% Similarity=0.094 Sum_probs=59.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc-------------cceeeecccccccee
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-------------HNLVLSTSYAAHKTK 527 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~-------------~~l~~~~~~~~~~~~ 527 (639)
..+|.++|.. .+|...|..|+++|.+|+. +++++.+.+++....... ..+...+.. ++++
T Consensus 3 ~~kI~VIGlG---~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~--~~aD 77 (415)
T PRK11064 3 FETISVIGLG---YIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTP--EPAD 77 (415)
T ss_pred ccEEEEECcc---hhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeeccc--ccCC
Confidence 3579999985 9999999999999999998 889999988755221111 111111112 3454
Q ss_pred E--EEEcCcCCh-------------hh-hhcCCCCceeecccccCCc
Q 006590 528 I--WLVGDDLTG-------------KE-QARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 528 v--wivg~~~~~-------------~~-q~~a~~G~~f~~~~~~~~~ 558 (639)
+ .-|+...++ ++ ...+++|++++.-|-+||.
T Consensus 78 vvii~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pg 124 (415)
T PRK11064 78 AFLIAVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSPVG 124 (415)
T ss_pred EEEEEcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 4 336654211 11 2336899999999998886
No 437
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=79.69 E-value=4.5 Score=42.71 Aligned_cols=99 Identities=14% Similarity=0.111 Sum_probs=61.7
Q ss_pred hHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---c--
Q 006590 450 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---S-- 520 (639)
Q Consensus 450 ltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~---~-- 520 (639)
+||+..+... .+..+.|++.|++| -||.++++.+..+|.+|.. ++.++.+.++++++.+. .+..+ +
T Consensus 137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G--~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~ 211 (338)
T cd08295 137 LTAYAGFYEVCKPKKGETVFVSAASG--AVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD---AFNYKEEPDLD 211 (338)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce---eEEcCCcccHH
Confidence 5555555332 23457899999998 9999999988899999876 78888888877444321 11111 1
Q ss_pred --ccc---cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006590 521 --YAA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 521 --~~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+++ ...++++ +|....++-.....+|-.++.+.
T Consensus 212 ~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G 251 (338)
T cd08295 212 AALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACG 251 (338)
T ss_pred HHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEec
Confidence 111 2345555 44333334445566676777765
No 438
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=79.47 E-value=3.8 Score=43.75 Aligned_cols=63 Identities=21% Similarity=0.274 Sum_probs=41.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCccccccceeeeccccc-cceeEEEE
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVEAQHNLVLSTSYAA-HKTKIWLV 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~----l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv 531 (639)
+|.++|+ | .||.++|..|+++|+ ++.+ +++++.+. +....+.... ..+..+++++ ++++++|+
T Consensus 2 kI~IIGa-G--~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~-~~i~~~d~~~l~~aDiVii 73 (308)
T cd05292 2 KVAIVGA-G--FVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKP-VRIYAGDYADCKGADVVVI 73 (308)
T ss_pred EEEEECC-C--HHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCC-eEEeeCCHHHhCCCCEEEE
Confidence 5899999 6 999999999999994 6777 66666654 4333222211 2233335666 88888664
No 439
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=79.27 E-value=3.6 Score=42.40 Aligned_cols=40 Identities=15% Similarity=0.178 Sum_probs=33.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccC---cEEEe--cchhhHHHHHhhC
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMG---IKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~---~~v~~--~~~~~~~~l~~~~ 507 (639)
+|.++|. | .+|.++|+.|.+.| .+|.+ |++++.++++++.
T Consensus 4 ~I~iIG~-G--~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~ 48 (267)
T PRK11880 4 KIGFIGG-G--NMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY 48 (267)
T ss_pred EEEEEec-h--HHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc
Confidence 5889997 5 99999999999888 56666 8888888887753
No 440
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=79.00 E-value=6.4 Score=40.98 Aligned_cols=87 Identities=11% Similarity=0.054 Sum_probs=54.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--c----ccc---cceeEEE
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YAA---HKTKIWL 530 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~~---~~~~vwi 530 (639)
....|++.|++| .+|.++++.+.+.|.+|.. +++++.+.+++ ++.. ..+... + +.. +..++++
T Consensus 139 ~~~~vlI~ga~g--~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~---~v~~~~~~~~~~~~~~~~~~~vd~v~ 212 (329)
T cd08250 139 SGETVLVTAAAG--GTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCD---RPINYKTEDLGEVLKKEYPKGVDVVY 212 (329)
T ss_pred CCCEEEEEeCcc--HHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cCCc---eEEeCCCccHHHHHHHhcCCCCeEEE
Confidence 356899999998 9999999988899999877 77777777744 3321 111111 1 111 2345555
Q ss_pred --EcCcCChhhhhcCCCCceeecccc
Q 006590 531 --VGDDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 531 --vg~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
+|.....+-.+.++++-.|+.+..
T Consensus 213 ~~~g~~~~~~~~~~l~~~g~~v~~g~ 238 (329)
T cd08250 213 ESVGGEMFDTCVDNLALKGRLIVIGF 238 (329)
T ss_pred ECCcHHHHHHHHHHhccCCeEEEEec
Confidence 333333344556777778887763
No 441
>PLN02256 arogenate dehydrogenase
Probab=78.99 E-value=5.2 Score=42.91 Aligned_cols=57 Identities=18% Similarity=0.343 Sum_probs=39.3
Q ss_pred cCCCCcceeeecCChhHH--HHHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 435 RQPNKLKIKVVDGSSLAA--AVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 435 k~p~~L~irvv~Gnslta--avv~~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
|.|..|++|-+|...--- .-.-+++.+ ...+|.++| .| .+|.++|+.|.+.|.+|..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIG-~G--~mG~slA~~L~~~G~~V~~ 64 (304)
T PLN02256 5 RRPRSLRVRAIDAAQPFDYESRLQEELEKSRKLKIGIVG-FG--NFGQFLAKTFVKQGHTVLA 64 (304)
T ss_pred CCCCCcccccccccCCCChHhHHhHhhccCCCCEEEEEe-eC--HHHHHHHHHHHhCCCEEEE
Confidence 556558888777532111 112344444 355899999 57 9999999999999988887
No 442
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=78.87 E-value=6.1 Score=41.79 Aligned_cols=102 Identities=14% Similarity=0.038 Sum_probs=65.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--c---ceeEEE--EcCc-
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--H---KTKIWL--VGDD- 534 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~---~~~vwi--vg~~- 534 (639)
+|.++|.- .+|+++|+.|.+.|.+|.+ |++++.+.+++. +... ..+.++ + ++++++ +-+.
T Consensus 2 ~Ig~IGlG---~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~------~~~~~e~~~~~~~~dvvi~~v~~~~ 71 (301)
T PRK09599 2 QLGMIGLG---RMGGNMARRLLRGGHEVVGYDRNPEAVEALAEE-GATG------ADSLEELVAKLPAPRVVWLMVPAGE 71 (301)
T ss_pred EEEEEccc---HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCee------cCCHHHHHhhcCCCCEEEEEecCCc
Confidence 57888854 9999999999999999998 888888887553 1111 112322 1 244433 3221
Q ss_pred -CC---hhhhhcCCCCceeecccccCCc-------CCC-CCceeecCCccccCC
Q 006590 535 -LT---GKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP 576 (639)
Q Consensus 535 -~~---~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~ 576 (639)
.. ++-...+++|.++++.+..+|. .++ +.+.|.+-|.+--|.
T Consensus 72 ~~~~v~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~dapvsG~~~ 125 (301)
T PRK09599 72 ITDATIDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVDVGTSGGVW 125 (301)
T ss_pred HHHHHHHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEeCCCCcCHH
Confidence 11 1112345789999999987775 222 677888877765443
No 443
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=78.79 E-value=6.8 Score=42.80 Aligned_cols=162 Identities=15% Similarity=0.318 Sum_probs=95.1
Q ss_pred HHHcCCcEEE-ecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh----------hHHHH
Q 006590 406 ADAKGVKVIS-LGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS----------LAAAV 454 (639)
Q Consensus 406 A~k~G~kv~~-LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns----------ltaav 454 (639)
+.++|.+++. ++. +.++|. |++..-+.+.|+|+ ..+|.|+.|-| +=+.+
T Consensus 66 ~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y~D~IviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQaLaDl~T 145 (338)
T PRK08192 66 FNLLGGHVRETTGMASSSLSKGESLYDTARVLSTYSDVIAMRHPDAGSVKEFAEGSRVPVINGGDGSNEHPTQALLDLFT 145 (338)
T ss_pred HHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHcCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHHHHHHHHH
Confidence 5679999997 452 445554 45667788889987 34588987533 13567
Q ss_pred HHhcC-----cCCCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHH---HHHhhCccccccceeeec-ccc-c
Q 006590 455 VVNSL-----PKTTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A 523 (639)
Q Consensus 455 v~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~-~ 523 (639)
+.+.. ..+..+|+++|...-+.+++..+..|| ..|..+.+-..+.|+ .+-+++. +.+.. +.++ +.+ +
T Consensus 146 i~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~ea 223 (338)
T PRK08192 146 IQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSPKELAMPDYVISDIE-NAGHK-ITITDQLEGN 223 (338)
T ss_pred HHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECCccccCCHHHHHHHH-HcCCe-EEEEcCHHHH
Confidence 77754 124579999998721278888888888 559999884444443 2111111 12223 3343 565 4
Q ss_pred -cceeEEEEcCcCChhhhhcCCCCceeec-ccccCCc---C-CCCCcee-ecCCc
Q 006590 524 -HKTKIWLVGDDLTGKEQARAPKGTIFIP-YTQIPPR---K-LRKDCFY-HSTPA 571 (639)
Q Consensus 524 -~~~~vwivg~~~~~~~q~~a~~G~~f~~-~~~~~~~---~-~R~dc~y-~~~~a 571 (639)
++++|+... .+..|+..+...-..|.+ | |+..+ + .++|+.+ |.+|+
T Consensus 224 ~~~aDvvyt~-~~q~e~~~~~~~~~~~~~~y-~v~~e~l~~~a~~~ai~mHcLP~ 276 (338)
T PRK08192 224 LDKADILYLT-RIQEERFPSQEEANKYRGKF-RLNQSIYTQHCKSNTVIMHPLPR 276 (338)
T ss_pred HccCCEEEEc-CcccccccchHHHHHhhhcc-ccCHHHHHhhhCCCCEEECCCCC
Confidence 888888873 343332111111111222 3 47666 2 4678775 88887
No 444
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=78.76 E-value=2 Score=44.33 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=26.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+|+++|++| .||+++++.|.++|.+|.+
T Consensus 1 kvlV~GatG--~iG~~l~~~l~~~g~~V~~ 28 (328)
T TIGR01179 1 KILVTGGAG--YIGSHTVRQLLESGHEVVV 28 (328)
T ss_pred CEEEeCCCC--HHHHHHHHHHHhCCCeEEE
Confidence 489999999 9999999999999999987
No 445
>PLN02306 hydroxypyruvate reductase
Probab=78.73 E-value=4.5 Score=44.91 Aligned_cols=94 Identities=11% Similarity=0.089 Sum_probs=59.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecc--h-hhHHHHHhhCcc----ccc--cceeeeccccc--cceeEE
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVATIC--K-DDYEKLKLRIPV----EAQ--HNLVLSTSYAA--HKTKIW 529 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~~~--~-~~~~~l~~~~~~----~~~--~~l~~~~~~~~--~~~~vw 529 (639)
..++|-++|-- .||+++|+.|+ --|.+|...+ . ++.+......+. ... .......++++ +.+|++
T Consensus 164 ~gktvGIiG~G---~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV 240 (386)
T PLN02306 164 KGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVI 240 (386)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEE
Confidence 45788999976 99999999997 7899998722 2 112111111110 000 00011235665 677776
Q ss_pred EE--------cCcCChhhhhcCCCCceeecccc---cCCc
Q 006590 530 LV--------GDDLTGKEQARAPKGTIFIPYTQ---IPPR 558 (639)
Q Consensus 530 iv--------g~~~~~~~q~~a~~G~~f~~~~~---~~~~ 558 (639)
++ -..|+.++..+|++|+.||-++| |+.+
T Consensus 241 ~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~lVDe~ 280 (386)
T PLN02306 241 SLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPVIDEV 280 (386)
T ss_pred EEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccccCHH
Confidence 63 23577888999999999999999 5554
No 446
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=78.69 E-value=2.6 Score=47.12 Aligned_cols=62 Identities=27% Similarity=0.289 Sum_probs=46.1
Q ss_pred eeeecCChhHHHHHH-hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 442 IKVVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 442 irvv~Gnsltaavv~-~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
++.++|.+--+++=. +.-..+...|+|+|||| ++|+=|.+.|-++|..|.. |++++-+++-.
T Consensus 57 ~~~~~~~~~e~~v~~~~~~~~~~~~VlVvGatG--~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 57 ISPVTGTTSEAEVSPPNNNSKKPTTVLVVGATG--KVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCccccccceeeeccCCCCCCCCCeEEEecCCC--chhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 555555555443331 22234677999999999 9999999999999988887 88888777755
No 447
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=78.58 E-value=3.8 Score=42.69 Aligned_cols=74 Identities=19% Similarity=0.211 Sum_probs=47.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCcccccccee--eecc---c----cc-----
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIPVEAQHNLV--LSTS---Y----AA----- 523 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~---~~~~l~~~~~~~~~~~l~--~~~~---~----~~----- 523 (639)
-+.|+++|+.| -||++.+..|.++|++++. .+.| ...+||+..|..+--. + .++. + ++
T Consensus 5 GKna~vtggag--GIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F-~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 5 GKNALVTGGAG--GIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIF-IKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred CceEEEecCCc--hhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEE-EEeccccHHHHHHHHHHHHHHh
Confidence 36789999997 8999999999999999998 3444 4445554444333111 1 2221 2 21
Q ss_pred cceeEEEEcCcCChhh
Q 006590 524 HKTKIWLVGDDLTGKE 539 (639)
Q Consensus 524 ~~~~vwivg~~~~~~~ 539 (639)
-+.||.|=|++|..+.
T Consensus 82 g~iDIlINgAGi~~dk 97 (261)
T KOG4169|consen 82 GTIDILINGAGILDDK 97 (261)
T ss_pred CceEEEEcccccccch
Confidence 4568888777766543
No 448
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=78.48 E-value=3.5 Score=42.10 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=36.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+-+.++|+.. -||+|||..|+++|.+|.+ ++.+.-+.-...++.
T Consensus 14 sk~~~vtGg~s--GIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g 60 (256)
T KOG1200|consen 14 SKVAAVTGGSS--GIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG 60 (256)
T ss_pred cceeEEecCCc--hHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC
Confidence 55677888885 9999999999999999999 666666766666655
No 449
>PLN02206 UDP-glucuronate decarboxylase
Probab=78.41 E-value=2.3 Score=47.71 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=28.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.++|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 119 ~~kILVTGatG--fIGs~Lv~~Ll~~G~~V~~ 148 (442)
T PLN02206 119 GLRVVVTGGAG--FVGSHLVDRLMARGDSVIV 148 (442)
T ss_pred CCEEEEECccc--HHHHHHHHHHHHCcCEEEE
Confidence 46899999999 9999999999999999987
No 450
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=78.30 E-value=18 Score=39.03 Aligned_cols=156 Identities=15% Similarity=0.229 Sum_probs=98.7
Q ss_pred HHHHHHHHHHcCCcEEEecc----cccccc-------cccC-CceeeecCCC---------CcceeeecCCh--h-----
Q 006590 399 IEEAILEADAKGVKVISLGL----LNQGEE-------LNRN-GEIYLERQPN---------KLKIKVVDGSS--L----- 450 (639)
Q Consensus 399 I~~Ai~~A~k~G~kv~~LG~----ln~~e~-------ln~~-g~~~~~k~p~---------~L~irvv~Gns--l----- 450 (639)
.|.|+. ++|.+++.|+. +.++|. |++. .-+.+.|+|+ ..+|+|+.+-+ .
T Consensus 63 Fe~A~~---~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ 139 (305)
T PRK00856 63 FELAAK---RLGADVINFSASTSSVSKGETLADTIRTLSAMGADAIVIRHPQSGAARLLAESSDVPVINAGDGSHQHPTQ 139 (305)
T ss_pred HHHHHH---HcCCcEEEeCCCcccCCCCcCHHHHHHHHHhcCCCEEEEeCCChHHHHHHHHHCCCCEEECCCCCCCCcHH
Confidence 455554 78999999975 444444 4556 6677888887 35688987732 1
Q ss_pred ---HHHHHHhcCcC-CCcEEEEeccc--CchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeec-ccc-
Q 006590 451 ---AAAVVVNSLPK-TTAHVLLRGTV--TANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLST-SYA- 522 (639)
Q Consensus 451 ---taavv~~~ip~-~~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~- 522 (639)
=+.++.+.... +..+|+++|.. | -+++..+.++++-|..+.+-..+.|+. +++.. ..++ +.+
T Consensus 140 ~LaDl~Ti~e~~G~l~g~kv~~vGD~~~~--~v~~Sl~~~~~~~g~~~~~~~P~~~~~--~~~~~------~~~~~d~~e 209 (305)
T PRK00856 140 ALLDLLTIREEFGRLEGLKVAIVGDIKHS--RVARSNIQALTRLGAEVRLIAPPTLLP--EGMPE------YGVHTDLDE 209 (305)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCCCC--cHHHHHHHHHHHcCCEEEEECCcccCc--ccccc------eEEECCHHH
Confidence 24566665432 45799999986 5 899999999999999999966666631 01111 1233 454
Q ss_pred c-cceeEEEEcCcCCh-------hhhhcCCCCceeecccccCCc---CCCCCcee-ecCCccc
Q 006590 523 A-HKTKIWLVGDDLTG-------KEQARAPKGTIFIPYTQIPPR---KLRKDCFY-HSTPAMI 573 (639)
Q Consensus 523 ~-~~~~vwivg~~~~~-------~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y-~~~~a~~ 573 (639)
+ ++++|+....+-++ ++.++.. =+| |++.+ ..++||.+ |.+|+.+
T Consensus 210 a~~~aDvvyt~~~q~e~~~~~~~~~~~~~~-----~~y-~v~~~ll~~a~~~~~~mHcLPa~R 266 (305)
T PRK00856 210 VIEDADVVMMLRVQKERMDGGLLPSYEEYK-----RSY-GLTAERLALAKPDAIVMHPGPVNR 266 (305)
T ss_pred HhCCCCEEEECCcccccccccchHHHHHHh-----ccC-ccCHHHHhhcCCCCEEECCCCCCC
Confidence 4 88888777443211 1122222 233 48877 55688875 8888643
No 451
>KOG2380 consensus Prephenate dehydrogenase (NADP+) [Amino acid transport and metabolism]
Probab=78.28 E-value=1.7 Score=47.39 Aligned_cols=144 Identities=19% Similarity=0.244 Sum_probs=88.7
Q ss_pred CCceeeecCCCCcceeeecCChhHHHHHH-hcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHH
Q 006590 428 NGEIYLERQPNKLKIKVVDGSSLAAAVVV-NSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLK 504 (639)
Q Consensus 428 ~g~~~~~k~p~~L~irvv~Gnsltaavv~-~~ip~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~ 504 (639)
+-.-+..--|.-|++|-.|--+.+-+.+. +++.+ .+.+|.++|=. +.|+-.|..|.+.|-.|..-++++|++++
T Consensus 14 ~~~t~~~~~p~~~~~~a~~~~~i~d~~~~~~s~~~~k~tl~IaIIGfG---nmGqflAetli~aGh~li~hsRsdyssaa 90 (480)
T KOG2380|consen 14 NSPTFLISPPRSLRIRAIDAAQIFDYMVSEDSIEQWKATLVIAIIGFG---NMGQFLAETLIDAGHGLICHSRSDYSSAA 90 (480)
T ss_pred CCCceeccCcHHHHHHhhhhhhhhhcccCcchhhhcccceEEEEEecC---cHHHHHHHHHHhcCceeEecCcchhHHHH
Confidence 33334444444456666664444444333 22332 46688888865 89999999999999999996667799999
Q ss_pred hhCccccccceeeeccccccceeEEEEcC-cCChhh------hhcCCCCceeecccc--cCCc-----CCCCCceeecCC
Q 006590 505 LRIPVEAQHNLVLSTSYAAHKTKIWLVGD-DLTGKE------QARAPKGTIFIPYTQ--IPPR-----KLRKDCFYHSTP 570 (639)
Q Consensus 505 ~~~~~~~~~~l~~~~~~~~~~~~vwivg~-~~~~~~------q~~a~~G~~f~~~~~--~~~~-----~~R~dc~y~~~~ 570 (639)
++.+...=.+ ..++-++..++++.-. .++-|. -.+...||+|.++.. -|++ -+-+||-.+.+-
T Consensus 91 ~~yg~~~ft~---lhdlcerhpDvvLlctsilsiekilatypfqrlrrgtlfvdvlSvKefek~lfekYLPkdfDIlctH 167 (480)
T KOG2380|consen 91 EKYGSAKFTL---LHDLCERHPDVVLLCTSILSIEKILATYPFQRLRRGTLFVDVLSVKEFEKELFEKYLPKDFDILCTH 167 (480)
T ss_pred HHhccccccc---HHHHHhcCCCEEEEEehhhhHHHHHHhcCchhhccceeEeeeeecchhHHHHHHHhCccccceEeec
Confidence 9977655222 1112235566655211 111111 113477899988765 2333 234999999999
Q ss_pred ccccCCC
Q 006590 571 AMIIPPS 577 (639)
Q Consensus 571 a~~~P~~ 577 (639)
.|-=|++
T Consensus 168 pmfGPks 174 (480)
T KOG2380|consen 168 PMFGPKS 174 (480)
T ss_pred CCcCCCc
Confidence 9988873
No 452
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=78.25 E-value=2.5 Score=45.74 Aligned_cols=25 Identities=24% Similarity=0.292 Sum_probs=22.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcE
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIK 491 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~ 491 (639)
.+|.|+|| | .||+++|..|..++..
T Consensus 1 ~KVaviGa-G--~VG~s~a~~l~~~~~~ 25 (313)
T COG0039 1 MKVAVIGA-G--NVGSSLAFLLLLQGLG 25 (313)
T ss_pred CeEEEECC-C--hHHHHHHHHHhccccc
Confidence 37999999 8 9999999999988776
No 453
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=78.22 E-value=3 Score=47.50 Aligned_cols=106 Identities=14% Similarity=0.149 Sum_probs=66.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--c---cee-EEEE---c
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--H---KTK-IWLV---G 532 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~---~~~-vwiv---g 532 (639)
++|.++|.- .+|+++|+.|.++|.+|.+ |++++.+.++++...+ +.++.-..++++ + +++ ||+. |
T Consensus 2 ~~IgvIGLG---~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~-g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~ 77 (470)
T PTZ00142 2 SDIGLIGLA---VMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEG-NTRVKGYHTLEELVNSLKKPRKVILLIKAG 77 (470)
T ss_pred CEEEEEeEh---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhc-CCcceecCCHHHHHhcCCCCCEEEEEeCCh
Confidence 578899976 9999999999999999999 9999999887752221 111111224443 2 454 4442 2
Q ss_pred CcCCh--hhh-hcCCCCceeecccccCCc-------CCC-CCceeecCCccc
Q 006590 533 DDLTG--KEQ-ARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMI 573 (639)
Q Consensus 533 ~~~~~--~~q-~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~ 573 (639)
+.++. ++. ....+|.++++.+...++ +++ +...|.+.|+.-
T Consensus 78 ~~v~~vi~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi~fldapVSG 129 (470)
T PTZ00142 78 EAVDETIDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYLGMGVSG 129 (470)
T ss_pred HHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEcCCCCC
Confidence 22111 122 235789999999885544 121 455576666654
No 454
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=78.06 E-value=5 Score=41.42 Aligned_cols=86 Identities=15% Similarity=0.229 Sum_probs=54.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--c----cc---c-cceeEE
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YA---A-HKTKIW 529 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~---~-~~~~vw 529 (639)
....|++.|++| .||.++++.+..+|.++.. ++.++.+.++ +++.. .++... + ++ . +..+++
T Consensus 138 ~~~~vlI~g~~~--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~v 211 (323)
T cd05282 138 PGDWVIQNAANS--AVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGAD---EVIDSSPEDLAQRVKEATGGAGARLA 211 (323)
T ss_pred CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCC---EEecccchhHHHHHHHHhcCCCceEE
Confidence 457899999998 9999999999999999877 7778888774 33321 111111 1 11 1 345666
Q ss_pred E--EcCcCChhhhhcCCCCceeeccc
Q 006590 530 L--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 530 i--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+ +|.....+-.+.++++-+|+.+.
T Consensus 212 l~~~g~~~~~~~~~~l~~~g~~v~~g 237 (323)
T cd05282 212 LDAVGGESATRLARSLRPGGTLVNYG 237 (323)
T ss_pred EECCCCHHHHHHHHhhCCCCEEEEEc
Confidence 6 33333333444666777777665
No 455
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=77.83 E-value=2.4 Score=48.46 Aligned_cols=110 Identities=11% Similarity=0.029 Sum_probs=71.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Cccccccceeeeccccc-----cceeEEE---
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAA-----HKTKIWL--- 530 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~-----~~~~vwi--- 530 (639)
...+|-++|-- ..|+++|+-|.++|.+|.+ |+.++.+.+.++ ...+. .++.-..+.++ ++++++|
T Consensus 5 ~~~~IG~IGLG---~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga-~~~~~a~s~~e~v~~l~~~dvIi~~v 80 (493)
T PLN02350 5 ALSRIGLAGLA---VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGN-LPLYGFKDPEDFVLSIQKPRSVIILV 80 (493)
T ss_pred CCCCEEEEeeH---HHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCC-cccccCCCHHHHHhcCCCCCEEEEEC
Confidence 34578888865 8999999999999999999 888999988774 11111 11111223332 2475544
Q ss_pred -----EcCcCChhhhhcCCCCceeecccccCCc-------CCC-CCceeecCCccccCC
Q 006590 531 -----VGDDLTGKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP 576 (639)
Q Consensus 531 -----vg~~~~~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~ 576 (639)
|.+.++ .-...+.+|.++||.+-++|+ +++ +.+.|.+-|+.--|.
T Consensus 81 ~~~~aV~~Vi~-gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fldapVSGG~~ 138 (493)
T PLN02350 81 KAGAPVDQTIK-ALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYLGMGVSGGEE 138 (493)
T ss_pred CCcHHHHHHHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeCCCcCCHH
Confidence 223331 113345799999999998776 122 566788888875554
No 456
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=77.65 E-value=5.3 Score=44.32 Aligned_cols=29 Identities=31% Similarity=0.286 Sum_probs=26.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|+. ++|.++|+.|.++|.+|++
T Consensus 5 ~k~v~iiG~g---~~G~~~A~~l~~~G~~V~~ 33 (450)
T PRK14106 5 GKKVLVVGAG---VSGLALAKFLKKLGAKVIL 33 (450)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEE
Confidence 4789999977 7999999999999999999
No 457
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=77.64 E-value=3.7 Score=49.00 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=32.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
+-++|.|+||. -+|+.||..+++.|.+|++ .+.+.+++
T Consensus 312 ~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~ 351 (715)
T PRK11730 312 PVKQAAVLGAG---IMGGGIAYQSASKGVPVIMKDINQKALDL 351 (715)
T ss_pred ccceEEEECCc---hhHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 45689999998 8999999999999999999 66666554
No 458
>PRK06436 glycerate dehydrogenase; Provisional
Probab=77.62 E-value=4.3 Score=43.51 Aligned_cols=80 Identities=13% Similarity=0.070 Sum_probs=54.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEE--------E
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------V 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------v 531 (639)
..++|-++|-- .||+++|+.|...|.+|...++... ++ +. . ....++++ +++++++ .
T Consensus 121 ~gktvgIiG~G---~IG~~vA~~l~afG~~V~~~~r~~~----~~---~~--~-~~~~~l~ell~~aDiv~~~lp~t~~T 187 (303)
T PRK06436 121 YNKSLGILGYG---GIGRRVALLAKAFGMNIYAYTRSYV----ND---GI--S-SIYMEPEDIMKKSDFVLISLPLTDET 187 (303)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCCCc----cc---Cc--c-cccCCHHHHHhhCCEEEECCCCCchh
Confidence 46788999985 9999999988788999988222110 00 00 0 01224444 5666655 2
Q ss_pred cCcCChhhhhcCCCCceeecccc
Q 006590 532 GDDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 532 g~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
-..++.+++..+++|++||.++|
T Consensus 188 ~~li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 188 RGMINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred hcCcCHHHHhcCCCCeEEEECCC
Confidence 33567889999999999999999
No 459
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=77.51 E-value=3 Score=44.34 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=29.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHH
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYE 501 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~ 501 (639)
++|+|+|+|| =||+.+|+.|.++ |.+|.. |+.++..
T Consensus 2 ~~ilVtGatG--fiGs~l~~~L~~~~~~~V~~~~r~~~~~~ 40 (347)
T PRK11908 2 KKVLILGVNG--FIGHHLSKRILETTDWEVYGMDMQTDRLG 40 (347)
T ss_pred cEEEEECCCc--HHHHHHHHHHHhCCCCeEEEEeCcHHHHH
Confidence 4699999999 9999999999865 688886 5554443
No 460
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=77.41 E-value=2.7 Score=47.06 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=28.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
...+|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 119 ~~mkILVTGatG--FIGs~Lv~~Ll~~G~~V~~ 149 (436)
T PLN02166 119 KRLRIVVTGGAG--FVGSHLVDKLIGRGDEVIV 149 (436)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 456899999999 9999999999999999987
No 461
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=77.34 E-value=2.3 Score=47.30 Aligned_cols=65 Identities=14% Similarity=0.166 Sum_probs=42.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcE------EE----e-cchhhHHHHHhhCcccc---ccceeeec--cccc-cce
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIK------VA----T-ICKDDYEKLKLRIPVEA---QHNLVLST--SYAA-HKT 526 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~------v~----~-~~~~~~~~l~~~~~~~~---~~~l~~~~--~~~~-~~~ 526 (639)
-+|.++||+| .||+++|..|+.+++- ++ + +++++.+-...++.... ..+ +.++ .+++ +++
T Consensus 45 ~KV~IIGAaG--~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~-v~i~~~~y~~~kda 121 (387)
T TIGR01757 45 VNVAVSGAAG--MISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLRE-VSIGIDPYEVFEDA 121 (387)
T ss_pred eEEEEECCCc--HHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCc-eEEecCCHHHhCCC
Confidence 4789999998 9999999999977762 23 2 46676665554433322 012 3333 3666 899
Q ss_pred eEEEE
Q 006590 527 KIWLV 531 (639)
Q Consensus 527 ~vwiv 531 (639)
+|+|+
T Consensus 122 DIVVi 126 (387)
T TIGR01757 122 DWALL 126 (387)
T ss_pred CEEEE
Confidence 88665
No 462
>PLN02602 lactate dehydrogenase
Probab=77.28 E-value=2.2 Score=46.68 Aligned_cols=64 Identities=22% Similarity=0.339 Sum_probs=41.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcE--EEe--cchhhHHHHHhhCcccc----ccceeee-ccccc-cceeEEEE
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLKLRIPVEA----QHNLVLS-TSYAA-HKTKIWLV 531 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~--v~~--~~~~~~~~l~~~~~~~~----~~~l~~~-~~~~~-~~~~vwiv 531 (639)
.+|.++|+ | .||+++|..|+.+++- +.| .++++.+-...++.... ... +.. ++|++ ++++|+|+
T Consensus 38 ~KI~IIGa-G--~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~~dy~~~~daDiVVi 111 (350)
T PLN02602 38 TKVSVVGV-G--NVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILASTDYAVTAGSDLCIV 111 (350)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeCCCHHHhCCCCEEEE
Confidence 69999997 7 9999999999977763 444 55665554443322211 112 222 24666 88988775
No 463
>PLN02572 UDP-sulfoquinovose synthase
Probab=77.15 E-value=2.4 Score=47.46 Aligned_cols=30 Identities=27% Similarity=0.234 Sum_probs=28.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.++|+|+|++| =||+.+|+.|.++|.+|.+
T Consensus 47 ~k~VLVTGatG--fIGs~Lv~~L~~~G~~V~~ 76 (442)
T PLN02572 47 KKKVMVIGGDG--YCGWATALHLSKRGYEVAI 76 (442)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCeEEE
Confidence 56799999999 9999999999999999987
No 464
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=77.03 E-value=3.3 Score=44.84 Aligned_cols=63 Identities=19% Similarity=0.178 Sum_probs=50.8
Q ss_pred hHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccc
Q 006590 450 LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN 514 (639)
Q Consensus 450 ltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~ 514 (639)
+-.....-..|+-...|+++|... -+|.++|.-+.++|-.|++ |++++++++++++.-.++..
T Consensus 20 ~~~~~~~~~~~k~~~hi~itggS~--glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~ 84 (331)
T KOG1210|consen 20 LLDHRSFIVKPKPRRHILITGGSS--GLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVE 84 (331)
T ss_pred HHHHHhhhcccCccceEEEecCcc--hhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccc
Confidence 333444445566678999999985 8999999999999999999 99999999999977766433
No 465
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=76.98 E-value=2.9 Score=44.80 Aligned_cols=28 Identities=21% Similarity=0.270 Sum_probs=25.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcE--EEe
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIK--VAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~--v~~ 494 (639)
+|.++|||| .||+++|..|+..|.. |.+
T Consensus 2 kI~IiGatG--~vG~~~a~~l~~~g~~~~v~l 31 (309)
T cd05294 2 KVSIIGASG--RVGSATALLLAKEDVVKEINL 31 (309)
T ss_pred EEEEECCCC--hHHHHHHHHHHhCCCCCEEEE
Confidence 689999999 9999999999998876 666
No 466
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=76.96 E-value=12 Score=40.26 Aligned_cols=163 Identities=13% Similarity=0.176 Sum_probs=92.9
Q ss_pred HHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 006590 406 ADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV 456 (639)
Q Consensus 406 A~k~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gnsl---------taavv~ 456 (639)
+.++|.+++.|+. +.++|.+ ....-+.+.|+|+ ..++.|+.+-+= =+.++.
T Consensus 60 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 139 (302)
T PRK14805 60 INKLGGHCLYLDQQNGALGKRESVADFAANLSCWADAIVARVFSHSTIEQLAEHGSVPVINALCDLYHPCQALADFLTLA 139 (302)
T ss_pred HHHcCCcEEECCCCcCcCCCCcCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 4679999999964 3334443 4455567778876 245777766441 134444
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHh---hCccccccceeeec-cccc-ccee
Q 006590 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKL---RIPVEAQHNLVLST-SYAA-HKTK 527 (639)
Q Consensus 457 ~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~---~~~~~~~~~l~~~~-~~~~-~~~~ 527 (639)
+.... +..+|+++|... .+++..+.+|++-|.+|.+-.++.++ ++.+ ++..+.+.+ +.++ +.++ ++++
T Consensus 140 e~~g~l~g~kva~vGD~~--~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~a~~~~~~~g~~-~~~~~d~~a~~~aD 216 (302)
T PRK14805 140 EQFGDVSKVKLAYVGDGN--NVTHSLMYGAAILGATMTVICPPGHFPDGQIVAEAQELAAKSGGK-LVLTSDIEAIEGHD 216 (302)
T ss_pred HHhCCcCCcEEEEEcCCC--ccHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCE-EEEEcCHHHHCCCC
Confidence 43321 356899999964 89999999999999999993333332 1111 111222333 2233 3555 7777
Q ss_pred EEEEcCcCChhhh-hcCCCCceeecccccCCc---CCCCCceeecCCcc
Q 006590 528 IWLVGDDLTGKEQ-ARAPKGTIFIPYTQIPPR---KLRKDCFYHSTPAM 572 (639)
Q Consensus 528 vwivg~~~~~~~q-~~a~~G~~f~~~~~~~~~---~~R~dc~y~~~~a~ 572 (639)
|+..+.|.+..+- .....-..|-+|. ++.+ ..++|-.-|.+|+-
T Consensus 217 vvy~~~w~~~~~~~~~~~~~~~~~~y~-vt~~~l~~a~~~~vmH~lP~~ 264 (302)
T PRK14805 217 AIYTDTWISMGDDTPLAEIKAKFAPYQ-VNKALMEKAGATFVMHCQPAH 264 (302)
T ss_pred EEEeeceEeCCCccccHHHHHhccCCc-CCHHHHhcCCCCeEECCCCCC
Confidence 7776665543110 0001112344453 7777 33456567888863
No 467
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=76.77 E-value=6.3 Score=40.73 Aligned_cols=42 Identities=19% Similarity=0.168 Sum_probs=35.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
....|++.|++| .+|.++++.+...|.+|.. ++.++.+.+++
T Consensus 162 ~~~~vlI~ga~g--~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 205 (332)
T cd08259 162 KGDTVLVTGAGG--GVGIHAIQLAKALGARVIAVTRSPEKLKILKE 205 (332)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 355799999998 9999999999999999877 77777777744
No 468
>PLN02342 ornithine carbamoyltransferase
Probab=76.74 E-value=23 Score=38.91 Aligned_cols=162 Identities=15% Similarity=0.188 Sum_probs=95.6
Q ss_pred HHHcCCcEEEecccc----ccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006590 406 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 456 (639)
Q Consensus 406 A~k~G~kv~~LG~ln----~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 456 (639)
+.++|.+++.|+.=+ ++|.+ ....-+.+.|+|+ ...+.|+.+-+ +=..++.
T Consensus 107 ~~~LGg~~i~l~~~~ss~~kGESl~DTarvLs~y~D~IviR~~~~~~~~~la~~~~vPVINA~~~~~HPtQaLaDl~Ti~ 186 (348)
T PLN02342 107 FFLLGGHALYLGPDDIQLGKREETRDIARVLSRYNDIIMARVFAHQDVLDLAEYSSVPVINGLTDYNHPCQIMADALTII 186 (348)
T ss_pred HHHcCCcEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEeCCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 568999999996533 44543 4455567778876 24577777643 1134555
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHH---HHhhCccccc-cceeeec-ccc-c-cceeE
Q 006590 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEK---LKLRIPVEAQ-HNLVLST-SYA-A-HKTKI 528 (639)
Q Consensus 457 ~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~---l~~~~~~~~~-~~l~~~~-~~~-~-~~~~v 528 (639)
+.... +..+|.++|... .+.+..+..|++-|.+|.+-..+.|+. +.+++. +.+ .. +.++ +.+ + ++++|
T Consensus 187 e~~G~l~glkva~vGD~~--nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~~~a~-~~g~~~-~~~~~d~~eav~~aDV 262 (348)
T PLN02342 187 EHIGRLEGTKVVYVGDGN--NIVHSWLLLAAVLPFHFVCACPKGYEPDAKTVEKAR-AAGISK-IEITNDPAEAVKGADV 262 (348)
T ss_pred HHhCCcCCCEEEEECCCc--hhHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHH-HhCCCc-EEEEcCHHHHhCCCCE
Confidence 54432 457999999975 799999999999999999844444331 111111 111 12 3333 455 4 88888
Q ss_pred EEEcCcCChhhhhc-CCCCceeecccccCCc---CCCCCce-eecCCcc
Q 006590 529 WLVGDDLTGKEQAR-APKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 572 (639)
Q Consensus 529 wivg~~~~~~~q~~-a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~ 572 (639)
+..+.|.+..+.++ ...-..|-+| |++.+ ..++||. -|.+|+.
T Consensus 263 vy~~~W~s~~~~e~~~~~~~~~~~y-~vt~ell~~ak~~aivMHpLP~~ 310 (348)
T PLN02342 263 VYTDVWASMGQKEEAEKRKKAFQGF-QVNEALMKLAGPQAYFMHCLPAE 310 (348)
T ss_pred EEECCccccccchhhHHHHHhccCC-ccCHHHHhccCCCcEEeCCCCcC
Confidence 88876554211100 0011123445 38877 5568886 4778864
No 469
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=76.68 E-value=6 Score=40.84 Aligned_cols=44 Identities=20% Similarity=0.303 Sum_probs=35.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+...|++.|++| .+|.++++.+...|.+|.+ +++++.+.++ +++
T Consensus 146 ~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g 191 (325)
T cd05280 146 EDGPVLVTGATG--GVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLG 191 (325)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC
Confidence 345899999998 9999999888899999876 7778887774 344
No 470
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=76.63 E-value=5 Score=43.40 Aligned_cols=98 Identities=10% Similarity=0.149 Sum_probs=63.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEEE-------
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------- 531 (639)
..++|-++|-- .||+++|+.|. --|.+|...+...-+.-..+.. +...++++ +.+|++++
T Consensus 144 ~gktvGIiG~G---~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~-------~~~~~l~ell~~sDvv~lh~plt~~ 213 (323)
T PRK15409 144 HHKTLGIVGMG---RIGMALAQRAHFGFNMPILYNARRHHKEAEERFN-------ARYCDLDTLLQESDFVCIILPLTDE 213 (323)
T ss_pred CCCEEEEEccc---HHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcC-------cEecCHHHHHHhCCEEEEeCCCChH
Confidence 56789999985 99999999986 7888888722111010001111 11235554 66777553
Q ss_pred -cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006590 532 -GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 532 -g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
-..++.++..+|++|+.||-++| |+.+ +++ -|++..+-
T Consensus 214 T~~li~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf~~EP 267 (323)
T PRK15409 214 THHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267 (323)
T ss_pred HhhccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecCCCCC
Confidence 23567789999999999999999 5543 333 57776664
No 471
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=76.53 E-value=2.9 Score=43.91 Aligned_cols=92 Identities=17% Similarity=0.241 Sum_probs=60.0
Q ss_pred hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc--cceeEEE--EcC--cCCh-----hh-h
Q 006590 476 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL--VGD--DLTG-----KE-Q 540 (639)
Q Consensus 476 kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwi--vg~--~~~~-----~~-q 540 (639)
.+|.++|+.|++.|.+|.+ |++++.+++++. . +..+ +.++ ++++++| |-+ .+.. ++ .
T Consensus 6 ~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-g-------~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~ 77 (288)
T TIGR01692 6 NMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAA-G-------AQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGIL 77 (288)
T ss_pred HhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHc-C-------CeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHh
Confidence 8999999999999999998 888888887654 1 1122 3332 5565544 221 1111 11 2
Q ss_pred hcCCCCceeecccccCCc---CC----C-CCceeecCCccccC
Q 006590 541 ARAPKGTIFIPYTQIPPR---KL----R-KDCFYHSTPAMIIP 575 (639)
Q Consensus 541 ~~a~~G~~f~~~~~~~~~---~~----R-~dc~y~~~~a~~~P 575 (639)
..+++|+++++.|-++|. ++ + +.+.|.+.|.+--|
T Consensus 78 ~~~~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vdaPv~Gg~ 120 (288)
T TIGR01692 78 PKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMDAPVSGGV 120 (288)
T ss_pred hcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEECCCCCCH
Confidence 246889999999998886 11 1 45668887776433
No 472
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=76.45 E-value=5.6 Score=41.50 Aligned_cols=86 Identities=21% Similarity=0.250 Sum_probs=57.7
Q ss_pred eeeecCChhH----HHHHHhcCcCCCcEEEEecccCchh--hHHHHHHHHhccCcEEEe-cchhhHHHHHhhCcccc-cc
Q 006590 442 IKVVDGSSLA----AAVVVNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QH 513 (639)
Q Consensus 442 irvv~Gnslt----aavv~~~ip~~~~~V~~~Gatg~~k--ig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~~~-~~ 513 (639)
+.+.++..-. ++..++.++ ..+.+++.|..|.-| ++.|++..||++|++|+. .-.|-..+|+.....+. ..
T Consensus 81 ~~~~~~~~~~~l~~~~~~~~~~~-~~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~~~~~~~~~ 159 (254)
T COG1484 81 FEFQPGIDKKALEDLASLVEFFE-RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAAFDEGRLEE 159 (254)
T ss_pred ccCCcchhHHHHHHHHHHHHHhc-cCCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHhcCchHH
Confidence 4444444433 333444667 777899999876324 899999999999999999 77888888888755422 11
Q ss_pred ceeeecccc-c-cceeEEEEcCc
Q 006590 514 NLVLSTSYA-A-HKTKIWLVGDD 534 (639)
Q Consensus 514 ~l~~~~~~~-~-~~~~vwivg~~ 534 (639)
. +. . .++++.|+||.
T Consensus 160 ~------l~~~l~~~dlLIiDDl 176 (254)
T COG1484 160 K------LLRELKKVDLLIIDDI 176 (254)
T ss_pred H------HHHHhhcCCEEEEecc
Confidence 1 11 2 46688787654
No 473
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=76.25 E-value=1.6 Score=47.05 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=30.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
-++|.|+||- .+|+.||..++.-|++|++ ++++..++
T Consensus 3 i~kv~ViGaG---~MG~gIA~~~A~~G~~V~l~D~~~~~~~~ 41 (307)
T COG1250 3 IKKVAVIGAG---VMGAGIAAVFALAGYDVVLKDISPEALER 41 (307)
T ss_pred ccEEEEEccc---chhHHHHHHHhhcCCceEEEeCCHHHHHH
Confidence 3689999998 9999999999997799999 66555443
No 474
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=76.19 E-value=7.1 Score=41.07 Aligned_cols=85 Identities=11% Similarity=0.190 Sum_probs=55.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec--c----ccc---cceeEEE-
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YAA---HKTKIWL- 530 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~~---~~~~vwi- 530 (639)
+.|++.|++| -||.++++.+...|. +|.. +++++.+.++++++.+. .+... + +++ ...++++
T Consensus 156 ~~VlI~ga~g--~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~---vi~~~~~~~~~~i~~~~~~gvd~vid 230 (345)
T cd08293 156 QTMVVSGAAG--ACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA---AINYKTDNVAERLRELCPEGVDVYFD 230 (345)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE---EEECCCCCHHHHHHHHCCCCceEEEE
Confidence 7899999998 999999998888898 6766 78888888887655422 11111 1 111 2356666
Q ss_pred -EcCcCChhhhhcCCCCceeeccc
Q 006590 531 -VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 531 -vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+|.....+-...+.+|-+++.+.
T Consensus 231 ~~g~~~~~~~~~~l~~~G~iv~~G 254 (345)
T cd08293 231 NVGGEISDTVISQMNENSHIILCG 254 (345)
T ss_pred CCCcHHHHHHHHHhccCCEEEEEe
Confidence 33333344455567777777765
No 475
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=76.11 E-value=2.4 Score=44.10 Aligned_cols=27 Identities=15% Similarity=0.306 Sum_probs=24.0
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
|+|+||+| =||+.+|+.|.++|.++..
T Consensus 2 ilVtGa~G--fiG~~l~~~L~~~g~~~v~ 28 (308)
T PRK11150 2 IIVTGGAG--FIGSNIVKALNDKGITDIL 28 (308)
T ss_pred EEEecCCc--HHHHHHHHHHHhCCCceEE
Confidence 79999999 9999999999999985443
No 476
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=76.11 E-value=5.3 Score=45.96 Aligned_cols=82 Identities=16% Similarity=0.128 Sum_probs=55.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhh-HHHHHhhCccccccceeeeccccc--cceeEEEE-------
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD-YEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~-~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------- 531 (639)
..++|.++|-- .||+.+|+.|...|.+|...+... -+.. .+.+. ...++++ +.++++++
T Consensus 139 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~~~g~-------~~~~l~ell~~aDiV~l~lP~t~~ 207 (526)
T PRK13581 139 YGKTLGIIGLG---RIGSEVAKRAKAFGMKVIAYDPYISPERA-AQLGV-------ELVSLDELLARADFITLHTPLTPE 207 (526)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHH-HhcCC-------EEEcHHHHHhhCCEEEEccCCChH
Confidence 35689999985 999999999999999998822211 1111 11111 1114544 56666542
Q ss_pred -cCcCChhhhhcCCCCceeecccc
Q 006590 532 -GDDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 532 -g~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
-..++.+....+++|++++.++|
T Consensus 208 t~~li~~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 208 TRGLIGAEELAKMKPGVRIINCAR 231 (526)
T ss_pred hhcCcCHHHHhcCCCCeEEEECCC
Confidence 24566788999999999999999
No 477
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=76.10 E-value=3.5 Score=43.31 Aligned_cols=39 Identities=10% Similarity=0.175 Sum_probs=33.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
++|.++|+. .+|+++|..|++.|.+|++ +++++.++.++
T Consensus 4 ~~I~ViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (291)
T PRK06035 4 KVIGVVGSG---VMGQGIAQVFARTGYDVTIVDVSEEILKNAME 44 (291)
T ss_pred cEEEEECcc---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 579999996 9999999999999999999 78888775544
No 478
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=76.05 E-value=3 Score=41.32 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=24.4
Q ss_pred EEEEecccCchhhHHHHHHHHhcc--CcEEEe
Q 006590 465 HVLLRGTVTANKVANAVASSLCQM--GIKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~--~~~v~~ 494 (639)
+|+++|++| -||+++|+.|+++ ++++..
T Consensus 2 ~vlItGas~--gIG~~ia~~l~~~~~~~~v~~ 31 (235)
T PRK09009 2 NILIVGGSG--GIGKAMVKQLLERYPDATVHA 31 (235)
T ss_pred EEEEECCCC--hHHHHHHHHHHHhCCCCEEEE
Confidence 689999998 9999999999987 466665
No 479
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=75.71 E-value=3.2 Score=43.01 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=42.2
Q ss_pred EEEecccCchhhHHHHHHHHhccC----cEEEe--cchhhHHHHHhhCcccccc--c-eeeec-c-ccc-cceeEEEE
Q 006590 466 VLLRGTVTANKVANAVASSLCQMG----IKVAT--ICKDDYEKLKLRIPVEAQH--N-LVLST-S-YAA-HKTKIWLV 531 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~----~~v~~--~~~~~~~~l~~~~~~~~~~--~-l~~~~-~-~~~-~~~~vwiv 531 (639)
|.++||.| .+|+.+|..|+..| .++.| .++++++....++..-... + -+..+ + +++ ++++++|.
T Consensus 1 I~IIGagG--~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~ 76 (263)
T cd00650 1 IAVIGAGG--NVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVII 76 (263)
T ss_pred CEEECCCC--hHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEE
Confidence 57899987 89999999999888 67887 6666666555543221111 1 12333 3 455 88888774
No 480
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=75.68 E-value=2.8 Score=42.93 Aligned_cols=28 Identities=18% Similarity=0.348 Sum_probs=26.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+|+|+|+|| -||+++++.|.++|.+|..
T Consensus 1 kilv~G~tG--~iG~~l~~~l~~~g~~v~~ 28 (287)
T TIGR01214 1 RILITGANG--QLGRELVQQLSPEGRVVVA 28 (287)
T ss_pred CEEEEcCCC--HHHHHHHHHHHhcCCEEEE
Confidence 489999999 9999999999999999886
No 481
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=75.48 E-value=4.8 Score=43.89 Aligned_cols=74 Identities=11% Similarity=0.104 Sum_probs=45.6
Q ss_pred HHHHHHHHhccCcEEEe--cchhhHH-----HHHhhCccccccceeeeccccc--cceeEEE--EcCcCC-----hhhhh
Q 006590 478 ANAVASSLCQMGIKVAT--ICKDDYE-----KLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDDLT-----GKEQA 541 (639)
Q Consensus 478 g~ava~~L~~~~~~v~~--~~~~~~~-----~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~~~-----~~~q~ 541 (639)
|+++|+-|++.|..|.+ |++++.+ .+.+. +.. ..++.++ ++++++| +.+.-. ..-..
T Consensus 32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~Laea-GA~------~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa 104 (341)
T TIGR01724 32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDA-GVK------VVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIE 104 (341)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHC-CCe------ecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHh
Confidence 89999999999999999 5665443 23332 111 1223332 5666644 221111 11123
Q ss_pred cCCCCceeecccccCCc
Q 006590 542 RAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 542 ~a~~G~~f~~~~~~~~~ 558 (639)
.+++|+++|+.|-++|.
T Consensus 105 ~L~~GaIVID~STIsP~ 121 (341)
T TIGR01724 105 HVPENAVICNTCTVSPV 121 (341)
T ss_pred cCCCCCEEEECCCCCHH
Confidence 46899999999998876
No 482
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=75.47 E-value=11 Score=38.38 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=34.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
.+.|++.|+.| .+|.++++.+..+|.+|.+ +++++.+.+++
T Consensus 145 g~~vlI~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 187 (325)
T cd08253 145 GETVLVHGGSG--AVGHAAVQLARWAGARVIATASSAEGAELVRQ 187 (325)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 46899999987 9999999999999999888 77777777743
No 483
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=75.36 E-value=2.3 Score=45.27 Aligned_cols=63 Identities=17% Similarity=0.301 Sum_probs=41.1
Q ss_pred EEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccc---cceeeec-cccc-cceeEEEE
Q 006590 466 VLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ---HNLVLST-SYAA-HKTKIWLV 531 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~---~~l~~~~-~~~~-~~~~vwiv 531 (639)
|.++|+ | .||+++|..|+.+|+ .+.+ .++++.+.+..++..-.. ...+..+ ++++ ++++++|+
T Consensus 1 i~iiGa-G--~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~~~l~~aDiVIi 72 (300)
T cd00300 1 ITIIGA-G--NVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYADAADADIVVI 72 (300)
T ss_pred CEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCHHHhCCCCEEEE
Confidence 468898 5 899999999998884 5666 667777766665333211 1112222 3666 88888775
No 484
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=75.30 E-value=9.5 Score=37.83 Aligned_cols=89 Identities=15% Similarity=0.095 Sum_probs=53.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--c----cc---c-cceeEE
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YA---A-HKTKIW 529 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~---~-~~~~vw 529 (639)
....|++.|++| .+|.++++.+..+|+++.. ++.++.+.+++.-+ ....++... + ++ . +.++++
T Consensus 108 ~g~~vlv~g~~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 183 (293)
T cd05195 108 KGESVLIHAAAG--GVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGG--PVDHIFSSRDLSFADGILRATGGRGVDVV 183 (293)
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCC--CcceEeecCchhHHHHHHHHhCCCCceEE
Confidence 346899999998 9999999988899999887 56667766654321 111112111 1 11 1 345665
Q ss_pred E--EcCcCChhhhhcCCCCceeecccc
Q 006590 530 L--VGDDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 530 i--vg~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
+ +|....++-.+..+++..++.+.+
T Consensus 184 i~~~~~~~~~~~~~~l~~~g~~v~~g~ 210 (293)
T cd05195 184 LNSLSGELLRASWRCLAPFGRFVEIGK 210 (293)
T ss_pred EeCCCchHHHHHHHhcccCceEEEeec
Confidence 5 444333444455666666776653
No 485
>PLN02477 glutamate dehydrogenase
Probab=75.02 E-value=12 Score=42.11 Aligned_cols=29 Identities=17% Similarity=0.248 Sum_probs=26.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEE
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA 493 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~ 493 (639)
..++|++.|- | .||+.+|+.|.++|.+|+
T Consensus 205 ~g~~VaIqGf-G--nVG~~~A~~L~e~GakVV 233 (410)
T PLN02477 205 AGQTFVIQGF-G--NVGSWAAQLIHEKGGKIV 233 (410)
T ss_pred cCCEEEEECC-C--HHHHHHHHHHHHcCCEEE
Confidence 3578999994 6 999999999999999999
No 486
>PRK08605 D-lactate dehydrogenase; Validated
Probab=74.95 E-value=6.3 Score=42.64 Aligned_cols=81 Identities=17% Similarity=0.137 Sum_probs=52.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHHHHHhhCcccccccee-eeccccc--cceeEEEEc-----
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYEKLKLRIPVEAQHNLV-LSTSYAA--HKTKIWLVG----- 532 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~-~~~~~~~--~~~~vwivg----- 532 (639)
..++|.++|.- .||+++|+.|+ ..|.+|...++..-...+.. + ..+++++ ++++++++-
T Consensus 145 ~g~~VgIIG~G---~IG~~vA~~L~~~~g~~V~~~d~~~~~~~~~~---------~~~~~~l~ell~~aDvIvl~lP~t~ 212 (332)
T PRK08605 145 KDLKVAVIGTG---RIGLAVAKIFAKGYGSDVVAYDPFPNAKAATY---------VDYKDTIEEAVEGADIVTLHMPATK 212 (332)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhcCCCEEEEECCCccHhHHhh---------ccccCCHHHHHHhCCEEEEeCCCCc
Confidence 45679999974 99999999996 46888888433211111110 1 1234553 566665521
Q ss_pred ---CcCChhhhhcCCCCceeecccc
Q 006590 533 ---DDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 533 ---~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
..++.+...++++|++++..++
T Consensus 213 ~t~~li~~~~l~~mk~gailIN~sR 237 (332)
T PRK08605 213 YNHYLFNADLFKHFKKGAVFVNCAR 237 (332)
T ss_pred chhhhcCHHHHhcCCCCcEEEECCC
Confidence 1334566778999999999999
No 487
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=74.65 E-value=7.1 Score=41.07 Aligned_cols=91 Identities=19% Similarity=0.165 Sum_probs=56.4
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc---c----cceeeeccccc--cceeEEEE--
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA---Q----HNLVLSTSYAA--HKTKIWLV-- 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~---~----~~l~~~~~~~~--~~~~vwiv-- 531 (639)
+|.++|+ | .+|+++|..|++.|.+|.+ |++++.++++++-.... + ......++.++ ++++++|+
T Consensus 3 kI~iiG~-G--~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (325)
T PRK00094 3 KIAVLGA-G--SWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV 79 (325)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence 5889997 4 9999999999999999988 88888888887621110 0 01112224442 56776552
Q ss_pred cCcCCh---hhh-hcCCCCceeeccc-ccCCc
Q 006590 532 GDDLTG---KEQ-ARAPKGTIFIPYT-QIPPR 558 (639)
Q Consensus 532 g~~~~~---~~q-~~a~~G~~f~~~~-~~~~~ 558 (639)
-+.-.+ ++. ...++|+++++.+ -+++.
T Consensus 80 ~~~~~~~v~~~l~~~~~~~~~vi~~~ngv~~~ 111 (325)
T PRK00094 80 PSQALREVLKQLKPLLPPDAPIVWATKGIEPG 111 (325)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEEeecccCC
Confidence 111000 111 1246789999987 36653
No 488
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=74.64 E-value=5.3 Score=42.48 Aligned_cols=29 Identities=21% Similarity=0.314 Sum_probs=25.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..+|.++| .| .||+.+|+.|.++|..+.+
T Consensus 3 ~~~v~IvG-~G--liG~s~a~~l~~~g~~v~i 31 (279)
T COG0287 3 SMKVGIVG-LG--LMGGSLARALKEAGLVVRI 31 (279)
T ss_pred CcEEEEEC-Cc--hHHHHHHHHHHHcCCeEEE
Confidence 35677777 77 9999999999999999977
No 489
>PRK06932 glycerate dehydrogenase; Provisional
Probab=74.63 E-value=4.4 Score=43.53 Aligned_cols=94 Identities=12% Similarity=0.081 Sum_probs=63.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEEE--------
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------- 531 (639)
..++|-++|-- .||+++|+.|.--|.+|+-.++..- .+... ...++++ +.+|++++
T Consensus 146 ~gktvgIiG~G---~IG~~va~~l~~fg~~V~~~~~~~~----~~~~~-------~~~~l~ell~~sDiv~l~~Plt~~T 211 (314)
T PRK06932 146 RGSTLGVFGKG---CLGTEVGRLAQALGMKVLYAEHKGA----SVCRE-------GYTPFEEVLKQADIVTLHCPLTETT 211 (314)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhcCCCEEEEECCCcc----ccccc-------ccCCHHHHHHhCCEEEEcCCCChHH
Confidence 45789999985 9999999999999999987322110 00000 0124554 66666553
Q ss_pred cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006590 532 GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 532 g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
-..++.++..+|++|+++|-++| |+.+ +++ -|++..+-
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRG~~Vde~AL~~aL~~g~i~gAaLDV~~~EP 264 (314)
T PRK06932 212 QNLINAETLALMKPTAFLINTGRGPLVDEQALLDALENGKIAGAALDVLVKEP 264 (314)
T ss_pred hcccCHHHHHhCCCCeEEEECCCccccCHHHHHHHHHcCCccEEEEecCCCCC
Confidence 24577888999999999999999 5544 344 57766663
No 490
>PRK06223 malate dehydrogenase; Reviewed
Probab=74.38 E-value=6.6 Score=41.52 Aligned_cols=65 Identities=17% Similarity=0.251 Sum_probs=40.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhh----Cccccccceeee-ccccc-cceeEEEE
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLR----IPVEAQHNLVLS-TSYAA-HKTKIWLV 531 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~----~~~~~~~~l~~~-~~~~~-~~~~vwiv 531 (639)
.+|.++|+ | .+|+++|..|++.|. .|.+ +++++.+....+ .........+.. +++++ ++++++|+
T Consensus 3 ~KI~VIGa-G--~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~~~~~aDiVii 76 (307)
T PRK06223 3 KKISIIGA-G--NVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYEDIAGSDVVVI 76 (307)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHHHHCCCCEEEE
Confidence 47999999 7 999999999998876 7777 656655432222 111111111222 24665 88888663
No 491
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=74.14 E-value=4.8 Score=42.77 Aligned_cols=37 Identities=16% Similarity=0.092 Sum_probs=31.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (639)
+|.++| .| -+|+++|..|+++|.+|++ ++++..+..+
T Consensus 4 ~V~VIG-~G--~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 4 SVAIIG-AG--LIGRAWAIVFARAGHEVRLWDADPAAAAAAP 42 (308)
T ss_pred EEEEEC-cc--HHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence 689999 55 9999999999999999999 7777777654
No 492
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=74.00 E-value=4.9 Score=43.73 Aligned_cols=29 Identities=17% Similarity=0.148 Sum_probs=24.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 006590 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~ 494 (639)
.+|+++|||| .+|+.+.+.|.+. ..++..
T Consensus 4 ~~V~I~GatG--~iG~~l~~~L~~~p~~el~~ 33 (349)
T PRK08664 4 LKVGILGATG--MVGQRFVQLLANHPWFEVTA 33 (349)
T ss_pred cEEEEECCCC--HHHHHHHHHHHcCCCceEEE
Confidence 4799999999 9999999999944 446555
No 493
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=73.90 E-value=7.7 Score=40.31 Aligned_cols=88 Identities=14% Similarity=0.165 Sum_probs=54.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--c----ccc---cceeEEE-
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YAA---HKTKIWL- 530 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~~---~~~~vwi- 530 (639)
...|++.|++| .+|.++++.+.+.|.+|.. ++.++.+.+++.++... .+... + +.+ ...++++
T Consensus 146 ~~~vlI~g~~g--~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~v~~~~~~~~d~vi~ 220 (329)
T cd05288 146 GETVVVSAAAG--AVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDA---AINYKTPDLAEALKEAAPDGIDVYFD 220 (329)
T ss_pred CCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCce---EEecCChhHHHHHHHhccCCceEEEE
Confidence 47899999987 9999999999999999877 67778887766444311 11111 1 111 2345555
Q ss_pred -EcCcCChhhhhcCCCCceeeccccc
Q 006590 531 -VGDDLTGKEQARAPKGTIFIPYTQI 555 (639)
Q Consensus 531 -vg~~~~~~~q~~a~~G~~f~~~~~~ 555 (639)
+|...-.+-.+..+++-.++.+...
T Consensus 221 ~~g~~~~~~~~~~l~~~G~~v~~g~~ 246 (329)
T cd05288 221 NVGGEILDAALTLLNKGGRIALCGAI 246 (329)
T ss_pred cchHHHHHHHHHhcCCCceEEEEeec
Confidence 3332223334456667778877643
No 494
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=73.66 E-value=5.5 Score=42.81 Aligned_cols=64 Identities=16% Similarity=0.251 Sum_probs=40.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccc----cc-eeeeccccc-cceeEEEE
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ----HN-LVLSTSYAA-HKTKIWLV 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~----~~-l~~~~~~~~-~~~~vwiv 531 (639)
+|.++|+ | .||+++|..|+.+++ .+.| .++++.+-....+..... .+ -+...+|++ ++++|+|+
T Consensus 1 Ki~IIGa-G--~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvi 74 (307)
T cd05290 1 KLVVIGA-G--HVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVI 74 (307)
T ss_pred CEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEE
Confidence 4789999 7 999999999997777 3555 556555544433333221 12 122335776 89988775
No 495
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=73.63 E-value=7.6 Score=41.67 Aligned_cols=84 Identities=15% Similarity=0.130 Sum_probs=58.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEEE--------
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------- 531 (639)
..++|-++|-- .||+++|+.|.--|-+|.-.++..- .+ +. . +...++++ +.+|++++
T Consensus 144 ~gktvGIiG~G---~IG~~vA~~~~~fgm~V~~~d~~~~----~~---~~--~-~~~~~l~ell~~sDvv~lh~Plt~~T 210 (311)
T PRK08410 144 KGKKWGIIGLG---TIGKRVAKIAQAFGAKVVYYSTSGK----NK---NE--E-YERVSLEELLKTSDIISIHAPLNEKT 210 (311)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhhcCCEEEEECCCcc----cc---cc--C-ceeecHHHHhhcCCEEEEeCCCCchh
Confidence 46788999975 9999999999999999988332110 00 00 0 12234554 66766552
Q ss_pred cCcCChhhhhcCCCCceeecccc---cCCc
Q 006590 532 GDDLTGKEQARAPKGTIFIPYTQ---IPPR 558 (639)
Q Consensus 532 g~~~~~~~q~~a~~G~~f~~~~~---~~~~ 558 (639)
-..|+.++..+|+||+.||-++| |+.+
T Consensus 211 ~~li~~~~~~~Mk~~a~lIN~aRG~vVDe~ 240 (311)
T PRK08410 211 KNLIAYKELKLLKDGAILINVGRGGIVNEK 240 (311)
T ss_pred hcccCHHHHHhCCCCeEEEECCCccccCHH
Confidence 24578889999999999999999 6665
No 496
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=73.54 E-value=6.2 Score=42.81 Aligned_cols=86 Identities=15% Similarity=0.200 Sum_probs=57.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEEE--------c
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------G 532 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------g 532 (639)
-++|-+.|-- +||+++|+.|.--|-+|.-.++.+-.+.+++....+ + ++.+ +.+|++++ -
T Consensus 146 gktvGIiG~G---rIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y------~-~l~ell~~sDii~l~~Plt~~T~ 215 (324)
T COG1052 146 GKTLGIIGLG---RIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARY------V-DLDELLAESDIISLHCPLTPETR 215 (324)
T ss_pred CCEEEEECCC---HHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCcee------c-cHHHHHHhCCEEEEeCCCChHHh
Confidence 4577777765 999999999998888888833332233333333222 2 2443 45555442 2
Q ss_pred CcCChhhhhcCCCCceeecccc---cCCc
Q 006590 533 DDLTGKEQARAPKGTIFIPYTQ---IPPR 558 (639)
Q Consensus 533 ~~~~~~~q~~a~~G~~f~~~~~---~~~~ 558 (639)
.-|..+++.+|++|++++-.+| ++.+
T Consensus 216 hLin~~~l~~mk~ga~lVNtaRG~~VDe~ 244 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTARGGLVDEQ 244 (324)
T ss_pred hhcCHHHHHhCCCCeEEEECCCccccCHH
Confidence 3577889999999999999998 5544
No 497
>PLN02712 arogenate dehydrogenase
Probab=73.38 E-value=5.5 Score=47.29 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=60.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc---cceeEEEEc-----
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWLVG----- 532 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~---~~~~vwivg----- 532 (639)
+.+|.++| .| .+|.++|+.|.+.|.+|.. ++.++ + ..++.+.. ..++.++ .+++++|+-
T Consensus 52 ~~kIgIIG-~G--~mG~slA~~L~~~G~~V~~~dr~~~~-~-~A~~~Gv~------~~~d~~e~~~~~aDvViLavP~~~ 120 (667)
T PLN02712 52 QLKIAIIG-FG--NYGQFLAKTLISQGHTVLAHSRSDHS-L-AARSLGVS------FFLDPHDLCERHPDVILLCTSIIS 120 (667)
T ss_pred CCEEEEEc-cC--HHHHHHHHHHHHCCCEEEEEeCCHHH-H-HHHHcCCE------EeCCHHHHhhcCCCEEEEcCCHHH
Confidence 46899999 57 9999999999999999887 44322 2 22222211 1333332 346775521
Q ss_pred --CcCChhhhhcCCCCceeecccccCCc-------CCCCCceeecCCccccCC
Q 006590 533 --DDLTGKEQARAPKGTIFIPYTQIPPR-------KLRKDCFYHSTPAMIIPP 576 (639)
Q Consensus 533 --~~~~~~~q~~a~~G~~f~~~~~~~~~-------~~R~dc~y~~~~a~~~P~ 576 (639)
+.++.--...+++|++++|++.+... .+.+++.|..+=.|-=|+
T Consensus 121 ~~~vl~~l~~~~l~~g~iVvDv~SvK~~~~~~l~~~l~~~~~~v~~HPMaG~e 173 (667)
T PLN02712 121 TENVLKSLPLQRLKRNTLFVDVLSVKEFAKNLLLDYLPEDFDIICSHPMFGPQ 173 (667)
T ss_pred HHHHHHhhhhhcCCCCeEEEECCCCcHHHHHHHHHhcCCCCeEEeeCCcCCCc
Confidence 12211111236789999999865531 122466666666665444
No 498
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=72.89 E-value=7.4 Score=42.41 Aligned_cols=41 Identities=12% Similarity=0.056 Sum_probs=34.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006590 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
...|+|.|++| .||.++++.+...|.++.. ++.++.+.+++
T Consensus 190 g~~vlV~Ga~g--~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~ 232 (398)
T TIGR01751 190 GDNVLIWGAAG--GLGSYATQLARAGGGNPVAVVSSPEKAEYCRE 232 (398)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH
Confidence 46999999998 9999999988899999765 77778777765
No 499
>PRK07680 late competence protein ComER; Validated
Probab=72.88 E-value=6.7 Score=40.80 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=31.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhC
Q 006590 465 HVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~----~v~~--~~~~~~~~l~~~~ 507 (639)
+|.++|+ | .+|+++|+.|.+.|. +|.+ |++++.+.++++.
T Consensus 2 ~I~iIG~-G--~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~ 47 (273)
T PRK07680 2 NIGFIGT-G--NMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERY 47 (273)
T ss_pred EEEEECc-c--HHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHc
Confidence 4789995 6 999999999998883 5666 8888888776653
No 500
>PRK06487 glycerate dehydrogenase; Provisional
Probab=72.83 E-value=5.9 Score=42.63 Aligned_cols=93 Identities=14% Similarity=0.093 Sum_probs=63.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--cceeEEEE--------
Q 006590 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------- 531 (639)
..++|-++|-- .||+++|+.|.--|.+|.-.++. . +. +. +...++++ +.+|++++
T Consensus 147 ~gktvgIiG~G---~IG~~vA~~l~~fgm~V~~~~~~--~---~~---~~----~~~~~l~ell~~sDiv~l~lPlt~~T 211 (317)
T PRK06487 147 EGKTLGLLGHG---ELGGAVARLAEAFGMRVLIGQLP--G---RP---AR----PDRLPLDELLPQVDALTLHCPLTEHT 211 (317)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhhCCCEEEEECCC--C---Cc---cc----ccccCHHHHHHhCCEEEECCCCChHH
Confidence 46789999985 99999999999999999872221 0 00 00 11124554 56666552
Q ss_pred cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006590 532 GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 532 g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
-..++.++..+||+|+.||-++| |+.+ +++ -|++..+-
T Consensus 212 ~~li~~~~~~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf~~EP 264 (317)
T PRK06487 212 RHLIGARELALMKPGALLINTARGGLVDEQALADALRSGHLGGAATDVLSVEP 264 (317)
T ss_pred hcCcCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecCCCCC
Confidence 34577889999999999999999 5544 333 56666653
Done!