BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006591
         (639 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc24201
 pdb|4DSY|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc24201
 pdb|4DSY|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc24201
 pdb|4DSY|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc24201
 pdb|4DT2|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc27209
 pdb|4DT2|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc27209
 pdb|4DT2|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc27209
 pdb|4DT2|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Cc27209
 pdb|4DHL|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Mo07123
 pdb|4DHL|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Mo07123
 pdb|4DHL|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Mo07123
 pdb|4DHL|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Maybridge Fragment Mo07123
          Length = 426

 Score =  110 bits (274), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 167/378 (44%), Gaps = 52/378 (13%)

Query: 216 PLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPA 275
           P   H++  D  G +M ++WV+ D EP            +S V  ++++N          
Sbjct: 21  PQQVHITQGDLVGRAMIISWVTMD-EPG-----------SSAVRYWSEKNGRKRIAKGKM 68

Query: 276 KDFGWHN--PGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSD-EMKFLA 332
             + + N   G+IH   +  L+ ++   Y  G      + +  F TPP  G D    F  
Sbjct: 69  STYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNT--TRRFSFITPPQTGLDVPYTFGL 126

Query: 333 YGDMGKA-PRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL----VE 387
            GD+G++   + +  HY              E++     +V  +GD+SYA  +     V 
Sbjct: 127 IGDLGQSFDSNTTLSHY--------------ELSPKKGQTVLFVGDLSYADRYPNHDNVR 172

Query: 388 WDFFLHQITPVASRVSYMTAIGNHERDY---VNSGSVYSTPDSGGECGIPYETYFPMPTP 444
           WD +        +   ++   GNHE ++   +N    +  P S     +PYE      + 
Sbjct: 173 WDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFK-PFSY-RYHVPYEA-----SQ 225

Query: 445 SKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYS 504
           S    WYSI++AS H  V+S+   +   + QY W++K+L  V RS+TPWLI   H P+Y+
Sbjct: 226 STSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYN 285

Query: 505 SLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDT 564
           S +      +      E   +K KVD+V  GHVH YER+      +   I  K  NG+ T
Sbjct: 286 SYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERS-----ERVSNIAYKITNGLCT 340

Query: 565 YDHSNYTAPVHAIIGMAG 582
               + +APV+  IG AG
Sbjct: 341 -PVKDQSAPVYITIGDAG 357


>pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Fluoride
 pdb|2QFP|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Fluoride
 pdb|2QFP|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Fluoride
 pdb|2QFP|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase In Complex With Fluoride
 pdb|2QFR|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase With Bound Sulfate
 pdb|2QFR|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
           Phosphatase With Bound Sulfate
          Length = 424

 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 167/378 (44%), Gaps = 52/378 (13%)

Query: 216 PLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPA 275
           P   H++  D  G +M ++WV+ D EP            +S V  ++++N          
Sbjct: 19  PQQVHITQGDLVGRAMIISWVTMD-EPG-----------SSAVRYWSEKNGRKRIAKGKM 66

Query: 276 KDFGWHN--PGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSD-EMKFLA 332
             + + N   G+IH   +  L+ ++   Y  G      + +  F TPP  G D    F  
Sbjct: 67  STYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNT--TRRFSFITPPQTGLDVPYTFGL 124

Query: 333 YGDMGKA-PRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL----VE 387
            GD+G++   + +  HY              E++     +V  +GD+SYA  +     V 
Sbjct: 125 IGDLGQSFDSNTTLSHY--------------ELSPKKGQTVLFVGDLSYADRYPNHDNVR 170

Query: 388 WDFFLHQITPVASRVSYMTAIGNHERDY---VNSGSVYSTPDSGGECGIPYETYFPMPTP 444
           WD +        +   ++   GNHE ++   +N    +  P S     +PYE      + 
Sbjct: 171 WDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFK-PFSY-RYHVPYEA-----SQ 223

Query: 445 SKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYS 504
           S    WYSI++AS H  V+S+   +   + QY W++K+L  V RS+TPWLI   H P+Y+
Sbjct: 224 STSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYN 283

Query: 505 SLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDT 564
           S +      +      E   +K KVD+V  GHVH YER+      +   I  K  NG+ T
Sbjct: 284 SYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERS-----ERVSNIAYKITNGLCT 338

Query: 565 YDHSNYTAPVHAIIGMAG 582
               + +APV+  IG AG
Sbjct: 339 -PVKDQSAPVYITIGDAG 355


>pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
 pdb|1KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
 pdb|1KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
 pdb|1KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
 pdb|3KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
 pdb|3KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
 pdb|3KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
 pdb|3KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
 pdb|4KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
 pdb|4KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
 pdb|4KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
 pdb|4KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
          Length = 432

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 167/378 (44%), Gaps = 52/378 (13%)

Query: 216 PLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPA 275
           P   H++  D  G +M ++WV+ D EP            +S V  ++++N          
Sbjct: 27  PQQVHITQGDLVGRAMIISWVTMD-EPG-----------SSAVRYWSEKNGRKRIAKGKM 74

Query: 276 KDFGWHN--PGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSD-EMKFLA 332
             + + N   G+IH   +  L+ ++   Y  G      + +  F TPP  G D    F  
Sbjct: 75  STYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNT--TRRFSFITPPQTGLDVPYTFGL 132

Query: 333 YGDMGKA-PRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL----VE 387
            GD+G++   + +  HY              E++     +V  +GD+SYA  +     V 
Sbjct: 133 IGDLGQSFDSNTTLSHY--------------ELSPKKGQTVLFVGDLSYADRYPNHDNVR 178

Query: 388 WDFFLHQITPVASRVSYMTAIGNHERDY---VNSGSVYSTPDSGGECGIPYETYFPMPTP 444
           WD +        +   ++   GNHE ++   +N    +  P S     +PYE      + 
Sbjct: 179 WDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFK-PFSY-RYHVPYEA-----SQ 231

Query: 445 SKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYS 504
           S    WYSI++AS H  V+S+   +   + QY W++K+L  V RS+TPWLI   H P+Y+
Sbjct: 232 STSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYN 291

Query: 505 SLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDT 564
           S +      +      E   +K KVD+V  GHVH YER+      +   I  K  +G+ T
Sbjct: 292 SYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERS-----ERVSNIAYKITDGLCT 346

Query: 565 YDHSNYTAPVHAIIGMAG 582
               + +APV+  IG AG
Sbjct: 347 -PVKDQSAPVYITIGDAG 363


>pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX
 pdb|1XZW|B Chain B, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX
          Length = 426

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 148/342 (43%), Gaps = 57/342 (16%)

Query: 284 GYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSD-EMKFLAYGDMGKAPRD 342
            +IH   +  L+  +   YR G    D   +  F TPP  G D    F   GD+G+    
Sbjct: 84  AFIHHCTIKDLEYDTKYYYRLGFG--DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDS 141

Query: 343 AST-EHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLV----EWDFFLHQITP 397
            +T  HY              E N+    +V  +GD+SY+  +       WD +      
Sbjct: 142 NTTLTHY--------------EQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSER 187

Query: 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGG-ECGIPYETYFPMP---TPSKDRPWYSI 453
             +   ++   GNHE DY         PD G  +  +P+   +P P   + S D  WY+I
Sbjct: 188 SVAYQPWIWTAGNHEIDYA--------PDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAI 239

Query: 454 EQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVD 513
           ++AS H  V+S+   +   S QYKW   +L  V+RS+TPWLI   H P+Y+S +      
Sbjct: 240 KRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEG 299

Query: 514 KFFVKSVEPLLLKNKVDLVLFGHVHNYERT-------CSVFRNKCMGIPTKDDNGIDTYD 566
           +      EP  +  KVD+V  GHVH+YER+        ++   KC   P  D+       
Sbjct: 300 EAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCT--PVSDE------- 350

Query: 567 HSNYTAPVHAIIGMAGFS---LDKFNKNNATWSLSRVAKFGY 605
               +APV+  IG  G S     +  +   ++S  R A FG+
Sbjct: 351 ----SAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGH 388


>pdb|1UTE|A Chain A, Pig Purple Acid Phosphatase Complexed With Phosphate
          Length = 313

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 24/229 (10%)

Query: 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVE 387
           ++F+A GD G  P       +     ++  KA++  V     D +  +GD  Y TG    
Sbjct: 7   LRFVAVGDWGGVPNAP----FHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 62

Query: 388 WDFFLHQI------TPVASRVSYMTAIGNHER-DYVNSGSVYSTPDSGGECGIPY-ETYF 439
            D    +        P    V +    GNH+    V++   YS          PY    F
Sbjct: 63  KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRF 122

Query: 440 PMPTPSKDRPWYSIEQASV-----HFTVISTEH--DWWLNSEQYKWIQKDLASVDRSKTP 492
            +P  +     + ++  ++      F     E   +  L   Q  WI+K LA+   +K  
Sbjct: 123 KIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKED 179

Query: 493 WLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541
           +++ AGH P++S  +         VK + PLL  +KV   L GH HN +
Sbjct: 180 YVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQ 226


>pdb|1QHW|A Chain A, Purple Acid Phosphatase From Rat Bone
          Length = 327

 Score = 37.7 bits (86), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 5/67 (7%)

Query: 475 QYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLF 534
           Q  W++K LA+   +K  +++ AGH P++S  +      +  VK++ PLL    V   L 
Sbjct: 186 QLSWLKKQLAA---AKEDYVLVAGHYPIWSIAEH--GPTRCLVKNLRPLLAAYGVTAYLC 240

Query: 535 GHVHNYE 541
           GH HN +
Sbjct: 241 GHDHNLQ 247


>pdb|1QFC|A Chain A, Structure Of Rat Purple Acid Phosphatase
          Length = 306

 Score = 37.7 bits (86), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)

Query: 468 DWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN 527
           D  +   Q  W++K LA+   +K  +++ AGH P++S  +      +  VK++ PLL   
Sbjct: 158 DLGVARTQLSWLKKQLAA---AKEDYVLVAGHYPIWSIAEH--GPTRCLVKNLRPLLAAY 212

Query: 528 KVDLVLFGHVHNYE 541
            V   L GH HN +
Sbjct: 213 GVTAYLCGHDHNLQ 226


>pdb|2BQ8|X Chain X, Crystal Structure Of Human Purple Acid Phosphatase With An
           Inhibitory Conformation Of The Repression Loop
          Length = 304

 Score = 37.4 bits (85), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 90/229 (39%), Gaps = 24/229 (10%)

Query: 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-V 386
           ++F+A GD G  P       +     ++  K ++  V     D +  +GD  Y TG   +
Sbjct: 5   LRFVAVGDWGGVP----NAPFHTAREMANAKEIARTVQILGADFILSLGDNFYFTGVQDI 60

Query: 387 EWDFFLHQITPVAS-----RVSYMTAIGNHER-DYVNSGSVYSTPDSGGECGIP-YETYF 439
               F      V S     +V +    GNH+    V++   YS          P Y  +F
Sbjct: 61  NDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQIAYSKISKRWNFPSPFYRLHF 120

Query: 440 PMPTPSKDRPWYSIEQASV-----HFTVISTEH--DWWLNSEQYKWIQKDLASVDRSKTP 492
            +P  +     + ++  ++      F     E   D  L   Q  W++K LA+   ++  
Sbjct: 121 KIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKLARTQLSWLKKQLAA---ARED 177

Query: 493 WLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541
           +++ AGH P++S  +         VK + PLL    V   L GH HN +
Sbjct: 178 YVLVAGHYPVWSIAEH--GPTHCLVKQLRPLLATYGVTAYLCGHDHNLQ 224


>pdb|1WAR|A Chain A, Recombinant Human Purple Acid Phosphatase Expressed In
           Pichia Pastoris
          Length = 310

 Score = 37.4 bits (85), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 94/241 (39%), Gaps = 30/241 (12%)

Query: 316 QFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHI 375
           +F TP       ++F+A GD G  P       +     ++  K ++  V     D +  +
Sbjct: 5   EFATP------ALRFVAVGDWGGVP----NAPFHTAREMANAKEIARTVQILGADFILSL 54

Query: 376 GDISYATGFL-VEWDFFLHQITPVAS-----RVSYMTAIGNHER-DYVNSGSVYSTPDSG 428
           GD  Y TG   +    F      V S     +V +    GNH+    V++   YS     
Sbjct: 55  GDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQIAYSKISKR 114

Query: 429 GECGIP-YETYFPMPTPSKDRPWYSIEQASV-----HFTVISTEH--DWWLNSEQYKWIQ 480
                P Y  +F +P  +     + ++  ++      F     E   D  L   Q  W++
Sbjct: 115 WNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKLARTQLSWLK 174

Query: 481 KDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540
           K LA+   ++  +++ AGH P++S  +         VK + PLL    V   L GH HN 
Sbjct: 175 KQLAA---AREDYVLVAGHYPVWSIAEH--GPTHCLVKQLRPLLATYGVTAYLCGHDHNL 229

Query: 541 E 541
           +
Sbjct: 230 Q 230


>pdb|1Z68|A Chain A, Crystal Structure Of Human Fibroblast Activation Protein
           Alpha
 pdb|1Z68|B Chain B, Crystal Structure Of Human Fibroblast Activation Protein
           Alpha
          Length = 719

 Score = 30.4 bits (67), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 537 VHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTA 572
           V ++E   SV+  + MG+PTKDDN ++ Y +S   A
Sbjct: 612 VSSWEYYASVYTERFMGLPTKDDN-LEHYKNSTVMA 646


>pdb|3QWQ|B Chain B, Crystal Structure Of The Extracellular Domain Of The
           Epidermal Growth Factor Receptor In Complex With An
           Adnectin
          Length = 114

 Score = 28.9 bits (63), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 23/78 (29%)

Query: 221 LSSVDSTGTSMRLTWVSGDKEPQ--QVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDF 278
           L  V +T TS+ ++W SG    Q  ++ YG+ G                     SP ++F
Sbjct: 10  LEVVAATPTSLLISWDSGRGSYQYYRITYGETGGN-------------------SPVQEF 50

Query: 279 GWHNPGYIHTAVMTGLQP 296
               PG +HTA ++GL+P
Sbjct: 51  TV--PGPVHTATISGLKP 66


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.319    0.134    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,438,344
Number of Sequences: 62578
Number of extensions: 826147
Number of successful extensions: 1843
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1834
Number of HSP's gapped (non-prelim): 17
length of query: 639
length of database: 14,973,337
effective HSP length: 105
effective length of query: 534
effective length of database: 8,402,647
effective search space: 4487013498
effective search space used: 4487013498
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)