Query 006591
Match_columns 639
No_of_seqs 491 out of 2889
Neff 7.3
Searched_HMMs 46136
Date Thu Mar 28 11:38:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006591.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006591hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 7E-70 1.5E-74 575.7 38.5 386 213-639 42-441 (452)
2 PLN02533 probable purple acid 100.0 4.4E-66 9.6E-71 564.2 43.9 367 211-637 39-420 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 7.9E-45 1.7E-49 380.3 32.3 279 326-635 3-294 (294)
4 PTZ00422 glideosome-associated 100.0 2.2E-32 4.8E-37 290.5 29.2 275 317-637 17-331 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 1.4E-30 3.1E-35 270.4 26.2 247 328-625 1-277 (277)
6 cd07395 MPP_CSTP1 Homo sapiens 100.0 6.1E-27 1.3E-31 241.4 24.2 241 326-621 3-261 (262)
7 KOG2679 Purple (tartrate-resis 99.9 4.2E-25 9E-30 217.6 19.5 267 316-637 33-331 (336)
8 PF09423 PhoD: PhoD-like phosp 99.9 3.6E-22 7.8E-27 221.7 28.3 241 284-543 61-380 (453)
9 cd07396 MPP_Nbla03831 Homo sap 99.9 2.3E-22 5.1E-27 208.0 22.9 194 328-543 1-231 (267)
10 cd07402 MPP_GpdQ Enterobacter 99.9 1.3E-22 2.8E-27 206.0 20.1 228 329-611 1-236 (240)
11 cd07401 MPP_TMEM62_N Homo sapi 99.9 2.6E-20 5.6E-25 191.5 19.6 192 330-546 2-216 (256)
12 PRK11148 cyclic 3',5'-adenosin 99.8 1.2E-19 2.7E-24 188.5 23.9 250 317-624 5-263 (275)
13 COG3540 PhoD Phosphodiesterase 99.8 4.6E-20 1E-24 195.1 18.2 291 215-539 36-417 (522)
14 cd07399 MPP_YvnB Bacillus subt 99.8 1.2E-19 2.6E-24 181.7 15.7 158 328-544 1-165 (214)
15 cd00842 MPP_ASMase acid sphing 99.7 1.7E-17 3.7E-22 174.2 15.0 183 354-543 52-264 (296)
16 PF00149 Metallophos: Calcineu 99.7 1.3E-16 2.7E-21 149.3 8.3 195 328-540 1-200 (200)
17 cd08163 MPP_Cdc1 Saccharomyces 99.7 8.9E-16 1.9E-20 157.6 14.4 161 366-543 43-231 (257)
18 cd07383 MPP_Dcr2 Saccharomyces 99.6 2.3E-15 5E-20 148.9 14.1 162 327-544 2-180 (199)
19 cd07393 MPP_DR1119 Deinococcus 99.6 6.3E-15 1.4E-19 149.4 17.1 191 330-547 1-212 (232)
20 TIGR03767 P_acnes_RR metalloph 99.6 9.5E-14 2E-18 150.5 19.1 94 447-543 290-395 (496)
21 COG1409 Icc Predicted phosphoh 99.6 1E-13 2.2E-18 144.2 17.1 186 328-540 1-193 (301)
22 cd07392 MPP_PAE1087 Pyrobaculu 99.5 1.6E-13 3.5E-18 133.4 16.6 167 330-541 1-174 (188)
23 TIGR03729 acc_ester putative p 99.5 1.5E-13 3.4E-18 139.9 14.4 183 329-541 1-222 (239)
24 cd07400 MPP_YydB Bacillus subt 99.5 3.8E-13 8.1E-18 125.8 12.4 127 330-543 1-128 (144)
25 cd07385 MPP_YkuE_C Bacillus su 99.5 8.3E-13 1.8E-17 132.5 14.0 204 327-583 1-206 (223)
26 cd07388 MPP_Tt1561 Thermus the 99.4 6.7E-12 1.4E-16 126.0 19.7 178 326-538 3-189 (224)
27 TIGR03768 RPA4764 metallophosp 99.4 3.5E-12 7.5E-17 137.1 17.2 93 448-541 292-412 (492)
28 cd00840 MPP_Mre11_N Mre11 nucl 99.4 3.2E-12 7E-17 127.8 12.1 198 329-542 1-203 (223)
29 PF14008 Metallophos_C: Iron/z 99.4 8E-13 1.7E-17 105.7 6.1 61 571-631 1-62 (62)
30 PRK11340 phosphodiesterase Yae 99.4 1.4E-11 3.1E-16 127.8 16.7 172 326-548 48-222 (271)
31 cd07404 MPP_MS158 Microscilla 99.3 9E-12 2E-16 119.5 10.7 146 330-542 1-151 (166)
32 PF12850 Metallophos_2: Calcin 99.2 5.6E-10 1.2E-14 105.1 15.1 123 328-543 1-124 (156)
33 KOG1432 Predicted DNA repair e 99.2 3.9E-09 8.5E-14 108.7 21.9 89 326-414 52-147 (379)
34 cd00838 MPP_superfamily metall 99.1 6.1E-10 1.3E-14 100.2 11.0 119 331-544 1-119 (131)
35 cd00841 MPP_YfcE Escherichia c 99.0 3.9E-09 8.4E-14 99.9 12.5 59 329-414 1-59 (155)
36 cd07394 MPP_Vps29 Homo sapiens 99.0 9.7E-08 2.1E-12 93.0 20.7 171 329-627 1-171 (178)
37 cd07379 MPP_239FB Homo sapiens 99.0 6.4E-09 1.4E-13 96.3 11.7 117 329-541 1-117 (135)
38 PRK05340 UDP-2,3-diacylglucosa 98.9 4.8E-09 1E-13 107.1 10.4 180 328-542 1-201 (241)
39 cd08166 MPP_Cdc1_like_1 unchar 98.9 5E-09 1.1E-13 102.5 10.0 109 363-543 37-150 (195)
40 cd07397 MPP_DevT Myxococcus xa 98.9 4.1E-08 8.8E-13 99.2 16.5 176 328-542 1-210 (238)
41 cd07384 MPP_Cdc1_like Saccharo 98.9 4.6E-09 9.9E-14 101.6 9.3 59 356-414 33-100 (171)
42 COG1408 Predicted phosphohydro 98.9 1.1E-08 2.5E-13 106.3 12.6 77 326-415 43-119 (284)
43 PF14582 Metallophos_3: Metall 98.9 9.7E-09 2.1E-13 100.7 10.1 178 328-541 6-219 (255)
44 COG2129 Predicted phosphoester 98.8 2.6E-07 5.6E-12 91.1 19.2 176 327-541 3-188 (226)
45 PRK09453 phosphodiesterase; Pr 98.8 3.3E-07 7.2E-12 89.4 18.8 71 328-414 1-76 (182)
46 TIGR00583 mre11 DNA repair pro 98.8 1.4E-07 3E-12 102.8 17.6 87 326-414 2-123 (405)
47 TIGR00040 yfcE phosphoesterase 98.8 1.2E-07 2.7E-12 90.2 15.1 62 328-413 1-63 (158)
48 cd08165 MPP_MPPE1 human MPPE1 98.8 1.4E-08 3.1E-13 96.7 8.4 56 359-414 29-89 (156)
49 cd07389 MPP_PhoD Bacillus subt 98.8 4.3E-08 9.3E-13 98.9 11.2 166 329-543 1-207 (228)
50 COG1768 Predicted phosphohydro 98.7 1.8E-07 3.8E-12 88.3 11.0 184 328-543 1-202 (230)
51 cd08164 MPP_Ted1 Saccharomyces 98.6 2E-07 4.4E-12 91.1 10.4 59 356-415 31-112 (193)
52 cd00845 MPP_UshA_N_like Escher 98.6 4.7E-07 1E-11 92.8 13.6 188 328-542 1-208 (252)
53 cd07403 MPP_TTHA0053 Thermus t 98.6 1.8E-07 3.9E-12 86.2 9.5 49 494-543 58-106 (129)
54 TIGR01854 lipid_A_lpxH UDP-2,3 98.6 5.1E-07 1.1E-11 91.6 13.5 75 331-414 2-81 (231)
55 KOG3770 Acid sphingomyelinase 98.6 4.7E-07 1E-11 100.1 13.9 179 354-542 194-406 (577)
56 cd07410 MPP_CpdB_N Escherichia 98.5 4.2E-06 9.2E-11 87.2 15.9 197 328-541 1-231 (277)
57 cd07406 MPP_CG11883_N Drosophi 98.5 1.6E-06 3.5E-11 89.4 12.6 187 328-541 1-208 (257)
58 cd07412 MPP_YhcR_N Bacillus su 98.4 3.2E-06 7E-11 88.6 13.9 210 328-542 1-243 (288)
59 cd07398 MPP_YbbF-LpxH Escheric 98.4 1.6E-06 3.4E-11 86.6 10.6 186 331-543 1-204 (217)
60 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.3 1.1E-05 2.4E-10 83.3 15.1 162 367-545 27-234 (262)
61 cd07411 MPP_SoxB_N Thermus the 98.2 1.4E-05 3.1E-10 82.7 13.3 185 328-541 1-220 (264)
62 cd07425 MPP_Shelphs Shewanella 98.2 2.9E-06 6.3E-11 84.7 7.9 70 331-414 1-80 (208)
63 cd07409 MPP_CD73_N CD73 ecto-5 98.2 1.9E-05 4.2E-10 82.5 14.3 192 328-541 1-219 (281)
64 COG0622 Predicted phosphoester 98.2 0.00013 2.7E-09 70.6 18.6 64 328-414 2-65 (172)
65 cd07408 MPP_SA0022_N Staphyloc 98.2 2.3E-05 5.1E-10 80.8 14.4 186 328-542 1-215 (257)
66 PRK04036 DNA polymerase II sma 98.1 4.8E-05 1.1E-09 85.8 15.8 80 326-414 242-343 (504)
67 TIGR00619 sbcd exonuclease Sbc 98.1 8.2E-06 1.8E-10 84.0 8.6 85 328-414 1-88 (253)
68 KOG3662 Cell division control 98.1 2.8E-05 6E-10 83.6 11.9 127 326-467 47-182 (410)
69 COG2908 Uncharacterized protei 98.1 7.5E-06 1.6E-10 81.7 6.9 74 331-413 1-79 (237)
70 cd07382 MPP_DR1281 Deinococcus 98.1 0.00017 3.8E-09 74.0 16.9 176 329-541 1-179 (255)
71 TIGR00282 metallophosphoestera 98.0 0.00043 9.4E-09 71.4 18.7 175 328-540 1-181 (266)
72 COG0420 SbcD DNA repair exonuc 98.0 1.5E-05 3.2E-10 87.3 8.2 85 328-414 1-88 (390)
73 cd07405 MPP_UshA_N Escherichia 97.9 0.00019 4.2E-09 75.2 15.2 202 328-541 1-222 (285)
74 PHA02546 47 endonuclease subun 97.9 2.1E-05 4.7E-10 84.4 8.1 85 328-414 1-89 (340)
75 PRK09419 bifunctional 2',3'-cy 97.9 0.00015 3.3E-09 89.8 16.3 194 327-541 660-883 (1163)
76 PRK10966 exonuclease subunit S 97.9 3E-05 6.5E-10 85.1 8.8 85 328-414 1-87 (407)
77 cd07407 MPP_YHR202W_N Saccharo 97.9 0.00036 7.7E-09 73.0 15.9 197 326-541 4-232 (282)
78 TIGR01530 nadN NAD pyrophospha 97.8 0.00044 9.6E-09 79.0 15.7 184 328-541 1-219 (550)
79 PRK09558 ushA bifunctional UDP 97.8 0.00025 5.4E-09 81.2 13.6 199 326-541 33-258 (551)
80 COG0737 UshA 5'-nucleotidase/2 97.7 0.00031 6.7E-09 79.8 12.9 202 326-540 25-247 (517)
81 cd08162 MPP_PhoA_N Synechococc 97.7 0.00044 9.4E-09 73.4 13.1 39 489-541 206-245 (313)
82 cd07380 MPP_CWF19_N Schizosacc 97.7 0.00015 3.2E-09 68.5 8.2 56 355-412 12-68 (150)
83 cd07391 MPP_PF1019 Pyrococcus 97.5 0.00015 3.2E-09 70.1 6.4 83 331-414 1-88 (172)
84 TIGR00024 SbcD_rel_arch putati 97.5 0.00028 6.1E-09 71.3 7.2 84 328-413 15-101 (225)
85 PHA02239 putative protein phos 97.4 0.00049 1.1E-08 70.0 7.8 69 328-413 1-72 (235)
86 cd07386 MPP_DNA_pol_II_small_a 97.3 0.0006 1.3E-08 69.7 8.1 75 331-414 2-94 (243)
87 PRK00166 apaH diadenosine tetr 97.3 0.00069 1.5E-08 70.5 7.7 67 328-413 1-68 (275)
88 PRK09419 bifunctional 2',3'-cy 97.2 0.0027 5.9E-08 78.9 13.9 56 327-382 41-99 (1163)
89 PRK11907 bifunctional 2',3'-cy 97.2 0.0071 1.5E-07 71.6 15.6 56 327-382 115-173 (814)
90 cd07423 MPP_PrpE Bacillus subt 97.1 0.001 2.2E-08 67.7 7.3 68 329-413 2-79 (234)
91 PRK09418 bifunctional 2',3'-cy 97.1 0.0082 1.8E-07 70.9 15.4 56 326-381 38-96 (780)
92 cd07424 MPP_PrpA_PrpB PrpA and 97.1 0.0012 2.6E-08 65.8 7.3 65 329-414 2-67 (207)
93 PRK13625 bis(5'-nucleosyl)-tet 97.1 0.0013 2.7E-08 67.5 7.2 69 328-413 1-78 (245)
94 cd07413 MPP_PA3087 Pseudomonas 97.0 0.0017 3.7E-08 65.5 7.3 68 330-414 1-76 (222)
95 PRK09968 serine/threonine-spec 96.9 0.0021 4.5E-08 64.7 7.3 64 329-413 16-80 (218)
96 cd07390 MPP_AQ1575 Aquifex aeo 96.9 0.0021 4.5E-08 61.9 7.0 78 331-414 2-82 (168)
97 PRK09420 cpdB bifunctional 2', 96.9 0.011 2.3E-07 69.0 13.7 88 326-415 24-123 (649)
98 cd07421 MPP_Rhilphs Rhilph pho 96.9 0.0028 6.1E-08 65.9 7.9 71 329-413 3-79 (304)
99 TIGR01390 CycNucDiestase 2',3' 96.9 0.011 2.3E-07 68.8 13.4 88 327-415 2-100 (626)
100 PRK11439 pphA serine/threonine 96.9 0.0023 5.1E-08 64.3 6.9 64 329-413 18-82 (218)
101 cd00144 MPP_PPP_family phospho 96.7 0.0032 6.9E-08 63.1 6.9 67 331-414 1-68 (225)
102 cd07422 MPP_ApaH Escherichia c 96.7 0.0043 9.3E-08 63.9 7.2 65 331-414 2-67 (257)
103 COG1692 Calcineurin-like phosp 96.6 0.31 6.7E-06 49.2 19.5 178 328-541 1-181 (266)
104 cd07387 MPP_PolD2_C PolD2 (DNA 96.6 0.035 7.7E-07 57.1 13.4 134 330-485 2-176 (257)
105 COG1311 HYS2 Archaeal DNA poly 96.6 0.05 1.1E-06 59.8 15.0 84 322-414 220-321 (481)
106 COG4186 Predicted phosphoester 96.5 0.064 1.4E-06 50.3 13.0 79 329-414 5-86 (186)
107 TIGR00668 apaH bis(5'-nucleosy 96.5 0.0068 1.5E-07 62.9 7.3 66 329-413 2-68 (279)
108 KOG2863 RNA lariat debranching 96.4 0.032 7E-07 58.7 11.6 173 328-539 1-229 (456)
109 cd07381 MPP_CapA CapA and rela 96.3 0.065 1.4E-06 54.5 13.4 88 449-542 122-221 (239)
110 smart00854 PGA_cap Bacterial c 95.8 0.22 4.8E-06 50.7 14.4 60 478-543 161-220 (239)
111 COG1407 Predicted ICC-like pho 95.8 0.018 4E-07 58.0 6.2 86 328-414 20-110 (235)
112 KOG2310 DNA repair exonuclease 95.7 0.041 9E-07 60.7 8.7 55 326-382 12-66 (646)
113 COG5555 Cytolysin, a secreted 95.4 0.028 6.2E-07 57.3 5.9 168 369-543 127-337 (392)
114 PF13277 YmdB: YmdB-like prote 95.1 0.43 9.4E-06 48.6 13.4 164 351-539 10-175 (253)
115 smart00156 PP2Ac Protein phosp 95.0 0.075 1.6E-06 55.3 7.9 69 329-414 29-99 (271)
116 PF00041 fn3: Fibronectin type 94.9 0.28 6.1E-06 40.3 9.8 69 215-306 2-75 (85)
117 PF09587 PGA_cap: Bacterial ca 94.7 0.43 9.2E-06 48.9 12.4 63 475-543 169-231 (250)
118 cd07416 MPP_PP2B PP2B, metallo 94.5 0.12 2.6E-06 54.7 8.0 69 329-414 44-114 (305)
119 cd07415 MPP_PP2A_PP4_PP6 PP2A, 94.3 0.13 2.7E-06 54.0 7.5 69 329-414 43-113 (285)
120 cd07420 MPP_RdgC Drosophila me 94.3 0.12 2.5E-06 55.1 7.3 69 329-414 52-123 (321)
121 KOG3947 Phosphoesterases [Gene 94.2 1 2.2E-05 46.3 13.3 69 326-416 60-128 (305)
122 cd07414 MPP_PP1_PPKL PP1, PPKL 93.9 0.15 3.3E-06 53.6 7.3 71 329-414 51-121 (293)
123 cd07418 MPP_PP7 PP7, metalloph 93.8 0.16 3.4E-06 55.1 7.3 70 328-414 66-138 (377)
124 PTZ00244 serine/threonine-prot 93.7 0.14 3E-06 53.9 6.6 68 330-414 54-123 (294)
125 KOG3325 Membrane coat complex 93.6 0.7 1.5E-05 43.1 9.9 85 518-635 97-182 (183)
126 KOG0196 Tyrosine kinase, EPH ( 93.5 0.69 1.5E-05 53.8 11.9 81 220-322 448-537 (996)
127 PTZ00239 serine/threonine prot 93.2 0.26 5.7E-06 52.1 7.7 69 329-414 44-114 (303)
128 PTZ00480 serine/threonine-prot 93.1 0.23 5E-06 52.8 7.0 69 329-414 60-130 (320)
129 KOG4419 5' nucleotidase [Nucle 92.9 0.41 8.8E-06 53.9 8.8 55 473-539 211-268 (602)
130 cd07417 MPP_PP5_C PP5, C-termi 92.0 0.4 8.8E-06 51.0 7.2 70 328-414 60-132 (316)
131 cd07419 MPP_Bsu1_C Arabidopsis 91.6 0.57 1.2E-05 49.8 7.9 21 517-537 242-262 (311)
132 PF04042 DNA_pol_E_B: DNA poly 90.5 0.4 8.7E-06 47.5 5.1 76 330-414 1-91 (209)
133 smart00060 FN3 Fibronectin typ 77.7 12 0.00027 28.7 7.4 22 286-307 56-77 (83)
134 PF07888 CALCOCO1: Calcium bin 76.5 18 0.00039 41.1 10.5 102 82-225 17-124 (546)
135 PF10179 DUF2369: Uncharacteri 76.1 45 0.00098 35.2 12.7 20 288-307 261-280 (300)
136 KOG0372 Serine/threonine speci 75.1 7.8 0.00017 39.3 6.4 42 371-414 72-114 (303)
137 KOG4221 Receptor mediating net 72.8 14 0.00031 45.3 8.9 120 175-321 573-712 (1381)
138 KOG4258 Insulin/growth factor 72.7 12 0.00025 44.3 7.9 117 215-336 488-623 (1025)
139 KOG3513 Neural cell adhesion m 67.4 28 0.00061 42.5 9.8 72 213-306 820-896 (1051)
140 KOG4221 Receptor mediating net 64.3 57 0.0012 40.4 11.4 136 171-335 479-629 (1381)
141 PTZ00235 DNA polymerase epsilo 63.1 36 0.00078 35.7 8.6 79 326-414 26-122 (291)
142 KOG0374 Serine/threonine speci 59.4 12 0.00026 40.1 4.5 23 517-539 233-255 (331)
143 cd00063 FN3 Fibronectin type 3 58.5 12 0.00025 29.9 3.4 21 286-306 56-76 (93)
144 PF06874 FBPase_2: Firmicute f 56.0 7 0.00015 44.8 2.1 58 355-418 171-228 (640)
145 PF00960 Neocarzinostat: Neoca 47.1 24 0.00052 31.4 3.6 23 72-94 1-23 (110)
146 KOG0371 Serine/threonine prote 45.8 49 0.0011 34.0 6.0 69 328-414 60-131 (319)
147 COG3855 Fbp Uncharacterized pr 42.6 21 0.00046 39.4 3.0 58 355-418 177-234 (648)
148 KOG2476 Uncharacterized conser 42.6 62 0.0013 36.0 6.5 70 327-411 5-75 (528)
149 TIGR02855 spore_yabG sporulati 42.5 35 0.00076 35.4 4.5 50 477-539 115-165 (283)
150 KOG0373 Serine/threonine speci 41.6 79 0.0017 31.8 6.5 40 372-414 76-117 (306)
151 PF05582 Peptidase_U57: YabG p 41.1 48 0.001 34.6 5.2 50 477-539 116-166 (287)
152 cd07390 MPP_AQ1575 Aquifex aeo 39.8 31 0.00066 32.9 3.5 17 527-543 124-140 (168)
153 cd01987 USP_OKCHK USP domain i 33.7 2.1E+02 0.0046 24.9 7.8 23 517-539 74-96 (124)
154 cd02856 Glycogen_debranching_e 32.8 57 0.0012 28.3 3.8 23 284-306 44-66 (103)
155 PF13956 Ibs_toxin: Toxin Ibs, 28.5 30 0.00064 20.6 0.8 14 13-26 3-16 (19)
156 KOG0375 Serine-threonine phosp 28.1 1E+02 0.0022 33.1 5.2 42 371-414 117-159 (517)
157 cd02853 MTHase_N_term Maltooli 27.1 80 0.0017 26.3 3.6 20 285-305 40-59 (85)
158 cd02852 Isoamylase_N_term Isoa 27.1 73 0.0016 28.4 3.6 23 284-306 48-70 (119)
159 cd02860 Pullulanase_N_term Pul 26.8 79 0.0017 27.2 3.6 24 284-307 46-69 (100)
160 KOG3513 Neural cell adhesion m 22.8 6E+02 0.013 31.6 10.9 226 53-306 437-693 (1051)
161 PF10989 DUF2808: Protein of u 21.4 1.2E+02 0.0026 28.3 4.0 27 73-99 91-117 (146)
162 PF09294 Interfer-bind: Interf 20.4 98 0.0021 26.6 3.0 19 288-306 68-86 (106)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7e-70 Score=575.69 Aligned_cols=386 Identities=39% Similarity=0.676 Sum_probs=315.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
.+.|+|+||++++.. ++|+|+|.|.+.....|+||.................+|+. .+ .+|+..|++|+|+|+
T Consensus 42 ~~~peQvhlS~~~~~-~~m~VswvT~~~~~~~V~Yg~~~~~~~~~~~~~~~~~~~~~----y~--~~~~~sg~ih~~~~~ 114 (452)
T KOG1378|consen 42 VNSPEQVHLSFTDNL-NEMRVSWVTGDGEENVVRYGEVKDKLDNSAARGMTEAWTDG----YA--NGWRDSGYIHDAVMK 114 (452)
T ss_pred CCCCCeEEEeccCCC-CcEEEEEeCCCCCCceEEEeecCCCccccccccceEEEecc----cc--cccceeeeEeeeeec
Confidence 467999999999865 59999999999988999999643321111012222223331 11 256788999999999
Q ss_pred CCCCCcEEEEEEccCCCccceeeEEECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEE
Q 006591 293 GLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSV 372 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfV 372 (639)
+|+|+|+|+||||++.. ||++++|+|+| +.+.+.+|+++||||......+. . ... ....++|+|
T Consensus 115 ~L~~~t~YyY~~Gs~~~-wS~~f~F~t~p-~~~~~~~~~i~GDlG~~~~~~s~-----------~-~~~--~~~~k~d~v 178 (452)
T KOG1378|consen 115 NLEPNTRYYYQVGSDLK-WSEIFSFKTPP-GQDSPTRAAIFGDMGCTEPYTST-----------L-RNQ--EENLKPDAV 178 (452)
T ss_pred CCCCCceEEEEeCCCCC-cccceEeECCC-CccCceeEEEEccccccccccch-----------H-hHH--hcccCCcEE
Confidence 99999999999999864 99999999999 33368999999999987654321 1 111 123479999
Q ss_pred EEcCCccccCCcH-HHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCC---CC
Q 006591 373 FHIGDISYATGFL-VEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSK---DR 448 (639)
Q Consensus 373 l~~GDl~y~~g~~-~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~---~~ 448 (639)
||+|||+|++++. .+||+|.+++||+++.+|+|++.||||+++..+. |+.+|..+|.||.+.. .+
T Consensus 179 lhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-----------~F~~y~~Rf~mP~~~s~s~~~ 247 (452)
T KOG1378|consen 179 LHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-----------CFVPYSARFNMPGNSSESDSN 247 (452)
T ss_pred EEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc-----------cccccceeeccCCCcCCCCCc
Confidence 9999999999988 6999999999999999999999999999876432 5779999999996643 46
Q ss_pred CeEEEEeCCEEEEEEeCCCCC--CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC--CC-CchhHHHHHHHHHH
Q 006591 449 PWYSIEQASVHFTVISTEHDW--WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD--GF-LSVDKFFVKSVEPL 523 (639)
Q Consensus 449 ~~Ysfd~G~v~fi~LDT~~~~--~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~--~~-~~~~~~~r~~l~~L 523 (639)
.||||++|++|||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+|++.. .. .+....+++.|++|
T Consensus 248 l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l 327 (452)
T KOG1378|consen 248 LYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPL 327 (452)
T ss_pred eeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHH
Confidence 899999999999999999875 46799999999999999988799999999999999886 22 23334678899999
Q ss_pred HHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCC--CCCCCCCCCCCccceecc
Q 006591 524 LLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGF--SLDKFNKNNATWSLSRVA 601 (639)
Q Consensus 524 l~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~--~l~~~~~~~~~ws~~~~~ 601 (639)
|.+|+||++|+||+|.|||+||+||.+|.... |-..+ .++.|||||++|.||+ .+..+..++|+||++|..
T Consensus 328 ~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~-----~~~~~--~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~R~~ 400 (452)
T KOG1378|consen 328 FVKYKVDVVFWGHVHRYERFCPIYNNTCGTGW-----GPVHL--VDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAFREG 400 (452)
T ss_pred HHHhceeEEEeccceehhccchhhcceeeccC-----Ccccc--cCCCCCEEEEEccCCcccccCcccCCCCcccccccc
Confidence 99999999999999999999999999996532 21122 2568999999999996 456666679999999999
Q ss_pred cccEEEEEE-eCCEEEEEEEEC--CCCeEEEEEEEEecCCC
Q 006591 602 KFGYLRGHA-TKQEIQLEFVNA--DTRKVEDSFRIIRRQID 639 (639)
Q Consensus 602 ~~Gy~~v~v-~~~~L~~e~~~~--~dG~v~D~f~I~k~~~d 639 (639)
+|||++|++ |.+++.++.+++ ..|.+.|+|+|.|+..+
T Consensus 401 dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~ 441 (452)
T KOG1378|consen 401 DFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRD 441 (452)
T ss_pred cCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCc
Confidence 999999999 778999999886 33899999999998754
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=4.4e-66 Score=564.22 Aligned_cols=367 Identities=29% Similarity=0.473 Sum_probs=301.4
Q ss_pred cCCCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEecCCCcc----cceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 211 ANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQ----TSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 211 ~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~~g~~~----~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
+++..|+|+||++++ .++|+|+|+|.+...+.|+||+.+... .+.+++|... ..+ .+|++
T Consensus 39 ~~~~~P~qvhls~~~--~~~m~V~W~T~~~~~~~V~yG~~~~~l~~~a~g~~~~~~~~-------------~~~-~~g~i 102 (427)
T PLN02533 39 DDPTHPDQVHISLVG--PDKMRISWITQDSIPPSVVYGTVSGKYEGSANGTSSSYHYL-------------LIY-RSGQI 102 (427)
T ss_pred CCCCCCceEEEEEcC--CCeEEEEEECCCCCCCEEEEecCCCCCcceEEEEEEEEecc-------------ccc-cCCeE
Confidence 467899999999997 479999999999888999999765432 1223344321 112 36899
Q ss_pred EEEEecCCCCCcEEEEEEccCCCccceeeEEECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN 366 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~ 366 (639)
|+|+|+||+|+|+|+||||.+ .+|+.++|+|+|.. .+++|+++||+|..... ..++ +.+.+
T Consensus 103 H~v~l~~L~p~T~Y~Yrvg~~--~~s~~~~F~T~p~~--~~~~f~v~GDlG~~~~~-----------~~tl----~~i~~ 163 (427)
T PLN02533 103 NDVVIGPLKPNTVYYYKCGGP--SSTQEFSFRTPPSK--FPIKFAVSGDLGTSEWT-----------KSTL----EHVSK 163 (427)
T ss_pred EEEEeCCCCCCCEEEEEECCC--CCccceEEECCCCC--CCeEEEEEEeCCCCccc-----------HHHH----HHHHh
Confidence 999999999999999999965 36889999999863 68999999999864321 1233 34455
Q ss_pred CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCC-
Q 006591 367 GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPS- 445 (639)
Q Consensus 367 ~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~- 445 (639)
.+|||||++||++|++++..+|+.|+++++++++.+|+|+++||||.+... ....+....|.++|.||...
T Consensus 164 ~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~--------~~~~~~f~~y~~rf~mP~~~~ 235 (427)
T PLN02533 164 WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP--------ILHPEKFTAYNARWRMPFEES 235 (427)
T ss_pred cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccc--------cccCcCccchhhcccCCcccc
Confidence 789999999999999888889999999999999999999999999986321 11123355788999999642
Q ss_pred --CCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCC--chhHHHHHHHH
Q 006591 446 --KDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFL--SVDKFFVKSVE 521 (639)
Q Consensus 446 --~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~--~~~~~~r~~l~ 521 (639)
..+.||+|++|++|||+||++.++..+.+|++||+++|++++++++||+||++|+|+|++..... .....+++.|+
T Consensus 236 g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le 315 (427)
T PLN02533 236 GSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESME 315 (427)
T ss_pred CCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHH
Confidence 35789999999999999999988888899999999999999888899999999999998764221 12345788999
Q ss_pred HHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCC---CCCCCCCCCccce
Q 006591 522 PLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSL---DKFNKNNATWSLS 598 (639)
Q Consensus 522 ~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l---~~~~~~~~~ws~~ 598 (639)
+||.+++||++|+||+|.|||++|+|+++| ++.||+|||+|+||+.. ..+..++++|+++
T Consensus 316 ~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~-----------------~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~ 378 (427)
T PLN02533 316 TLLYKARVDLVFAGHVHAYERFDRVYQGKT-----------------DKCGPVYITIGDGGNREGLATKYIDPKPDISLF 378 (427)
T ss_pred HHHHHhCCcEEEecceecccccccccCCcc-----------------CCCCCEEEEeCCCccccccccccCCCCCCceeE
Confidence 999999999999999999999999999865 23689999999999863 3455567899999
Q ss_pred ecccccEEEEEE-eCCEEEEEEEECCCC--eEEEEEEEEecC
Q 006591 599 RVAKFGYLRGHA-TKQEIQLEFVNADTR--KVEDSFRIIRRQ 637 (639)
Q Consensus 599 ~~~~~Gy~~v~v-~~~~L~~e~~~~~dG--~v~D~f~I~k~~ 637 (639)
|..+|||.+|++ +.++|+++|+++.+| .+.|+|+|.|-.
T Consensus 379 r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~ 420 (427)
T PLN02533 379 REASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLL 420 (427)
T ss_pred EeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEecc
Confidence 999999999997 999999999997666 389999999854
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=7.9e-45 Score=380.34 Aligned_cols=279 Identities=40% Similarity=0.687 Sum_probs=221.3
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH--HHHHHHHHhhhhhhcCCc
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL--VEWDFFLHQITPVASRVS 403 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~--~~wd~f~~~l~~l~~~vP 403 (639)
.++||+++||+|.... .+.+++++|.++ ..+|||||++||++|+.+.. .+|+.|++.++++.+.+|
T Consensus 3 ~~~~f~v~gD~~~~~~----------~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P 70 (294)
T cd00839 3 TPFKFAVFGDMGQNTN----------NSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP 70 (294)
T ss_pred CcEEEEEEEECCCCCC----------CcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC
Confidence 6799999999997521 235677777654 47899999999999988765 789999999999999999
Q ss_pred eEEecCCCCcCCCCCCCccCCCCCCCccccccccccCC---CCCCCCCCeEEEEeCCEEEEEEeCCCCC---CCCHHHHH
Q 006591 404 YMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPM---PTPSKDRPWYSIEQASVHFTVISTEHDW---WLNSEQYK 477 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~---P~~~~~~~~Ysfd~G~v~fi~LDT~~~~---~~g~~Q~~ 477 (639)
+++++||||.......... ..+..++.+ +.....+.||+|++|++|||+|||+... ..+.+|++
T Consensus 71 ~~~~~GNHD~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~ 140 (294)
T cd00839 71 YMVTPGNHEADYNFSFYKI----------KAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYD 140 (294)
T ss_pred cEEcCcccccccCCCCccc----------ccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHH
Confidence 9999999998643221100 000001112 2222356799999999999999998765 67899999
Q ss_pred HHHHHHhhccCCCCCeEEEEeccCCccCCCCCCc--hhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCC
Q 006591 478 WIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLS--VDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIP 555 (639)
Q Consensus 478 WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~--~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~ 555 (639)
||+++|+++++.+.+|+||++|+|+|........ .....++.|++||++|+|+++|+||+|.|+|++|+++++|+...
T Consensus 141 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~ 220 (294)
T cd00839 141 WLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDC 220 (294)
T ss_pred HHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEecccc
Confidence 9999999987667799999999999987653222 24567899999999999999999999999999999999886211
Q ss_pred ccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCC--CCCccceecccccEEEEEEeC-CEEEEEEEECCCCeEEEEEE
Q 006591 556 TKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKN--NATWSLSRVAKFGYLRGHATK-QEIQLEFVNADTRKVEDSFR 632 (639)
Q Consensus 556 ~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~--~~~ws~~~~~~~Gy~~v~v~~-~~L~~e~~~~~dG~v~D~f~ 632 (639)
..| .++++|+|||+|+||+.+...... .++|+.++...+||++|++.+ ++|+++++++.+|+|+|+|+
T Consensus 221 -------~~~--~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~ 291 (294)
T cd00839 221 -------NPY--SNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFW 291 (294)
T ss_pred -------ccc--cCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEE
Confidence 122 246799999999999987644322 358999999999999999965 59999999988999999999
Q ss_pred EEe
Q 006591 633 IIR 635 (639)
Q Consensus 633 I~k 635 (639)
|.|
T Consensus 292 i~k 294 (294)
T cd00839 292 IIK 294 (294)
T ss_pred EeC
Confidence 987
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=2.2e-32 Score=290.45 Aligned_cols=275 Identities=19% Similarity=0.252 Sum_probs=198.0
Q ss_pred EECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc----HHHHHH-H
Q 006591 317 FRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF----LVEWDF-F 391 (639)
Q Consensus 317 F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~----~~~wd~-f 391 (639)
|.+.+.. ...++|+++||+|.+. ..+..+.++|.+.+++.++|||+.+||+. .+|. ..+|+. |
T Consensus 17 ~~~~~~~-~~~l~F~~vGDwG~g~----------~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~F 84 (394)
T PTZ00422 17 FISSYSV-KAQLRFASLGNWGTGS----------KQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCF 84 (394)
T ss_pred EEeeccc-CCeEEEEEEecCCCCc----------hhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhH
Confidence 4444333 2579999999999642 12467788888888889999999999998 4443 355765 4
Q ss_pred HHhhhhhh--cCCceEEecCCCCcCCCCCCC--ccCCC----CCCC--cc--ccccccccCCCCCCCCCCeEEEE----e
Q 006591 392 LHQITPVA--SRVSYMTAIGNHERDYVNSGS--VYSTP----DSGG--EC--GIPYETYFPMPTPSKDRPWYSIE----Q 455 (639)
Q Consensus 392 ~~~l~~l~--~~vP~~~v~GNHD~~~~~~~~--~y~~~----dsgg--e~--~~~y~~~f~~P~~~~~~~~Ysfd----~ 455 (639)
-+...... .++|+++++||||+..+.... .|... +... +. ...-..+|.||. .||++. .
T Consensus 85 E~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~ 159 (394)
T PTZ00422 85 ENVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTD 159 (394)
T ss_pred hhhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeec
Confidence 44444433 578999999999984222110 01100 0000 00 001235788884 577542 1
Q ss_pred -------------CCEEEEEEeCCCC-----C-CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHH
Q 006591 456 -------------ASVHFTVISTEHD-----W-WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFF 516 (639)
Q Consensus 456 -------------G~v~fi~LDT~~~-----~-~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~ 516 (639)
..+.||+|||... + .....|++||+++|+.+ ++.++|+||++|||+|+.+.+ +.+.++
T Consensus 160 ~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~h--g~~~~L 236 (394)
T PTZ00422 160 TSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSS--KGDSYL 236 (394)
T ss_pred ccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCC--CCCHHH
Confidence 1289999999631 1 23578999999999754 456789999999999998863 234668
Q ss_pred HHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCcc
Q 006591 517 VKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWS 596 (639)
Q Consensus 517 r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws 596 (639)
+..|+|||++|+||++|+||+|+|||..+ +++.||++|+||...... ....+|+
T Consensus 237 ~~~L~PLL~ky~VdlYisGHDH~lq~i~~-------------------------~gt~yIvSGaGs~~~~~~-~~~~~~s 290 (394)
T PTZ00422 237 SYYLLPLLKDAQVDLYISGYDRNMEVLTD-------------------------EGTAHINCGSGGNSGRKS-IMKNSKS 290 (394)
T ss_pred HHHHHHHHHHcCcCEEEEccccceEEecC-------------------------CCceEEEeCccccccCCC-CCCCCCc
Confidence 89999999999999999999999999631 246799999998865432 2346778
Q ss_pred ceecccccEEEEEEeCCEEEEEEEECCCCeEEEEEEEEecC
Q 006591 597 LSRVAKFGYLRGHATKQEIQLEFVNADTRKVEDSFRIIRRQ 637 (639)
Q Consensus 597 ~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v~D~f~I~k~~ 637 (639)
.+....+||+.++++.++|+++|++..+|++++++++.|+.
T Consensus 291 ~F~~~~~GF~~~~l~~~~l~~~fid~~~GkvL~~~~~~~~~ 331 (394)
T PTZ00422 291 LFYSEDIGFCIHELNAEGMVTKFVSGNTGEVLYTHKQPLKK 331 (394)
T ss_pred ceecCCCCEEEEEEecCEEEEEEEeCCCCcEEEEeeecccc
Confidence 88888999999999999999999976799999999997754
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.97 E-value=1.4e-30 Score=270.37 Aligned_cols=247 Identities=27% Similarity=0.377 Sum_probs=180.0
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH----HHH-HHHHHhhhhhhcCC
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL----VEW-DFFLHQITPVASRV 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~----~~w-d~f~~~l~~l~~~v 402 (639)
++|+++||+|.... +....+.+.|.+.+++.+|||||++||++|+.|.. .+| +.|.+.++.+..++
T Consensus 1 ~~f~~~gD~g~~~~---------~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (277)
T cd07378 1 LRFLALGDWGGGGT---------AGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQV 71 (277)
T ss_pred CeEEEEeecCCCCC---------HHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcC
Confidence 48999999997521 12356667777777778999999999999887642 334 34555555554689
Q ss_pred ceEEecCCCCcCCCCCCC-ccCCCCCCCccccccccccCCCCCCCCCCeEEEEeC------CEEEEEEeCCCCC------
Q 006591 403 SYMTAIGNHERDYVNSGS-VYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQA------SVHFTVISTEHDW------ 469 (639)
Q Consensus 403 P~~~v~GNHD~~~~~~~~-~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G------~v~fi~LDT~~~~------ 469 (639)
|+|+++||||........ .|. ...+..+|.+| ..||+|+++ +++||+|||....
T Consensus 72 P~~~v~GNHD~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~ 138 (277)
T cd07378 72 PWYLVLGNHDYSGNVSAQIDYT--------KRPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDI 138 (277)
T ss_pred CeEEecCCcccCCCchheeehh--------ccCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCccccc
Confidence 999999999985211000 000 00012334444 469999998 7999999997531
Q ss_pred ---------CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccc
Q 006591 470 ---------WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540 (639)
Q Consensus 470 ---------~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Y 540 (639)
..+.+|++||++.|+++. .+|+||++|+|+++..... .....++.|++++++++|+++|+||+|.+
T Consensus 139 ~~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~ 213 (277)
T cd07378 139 ASPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNL 213 (277)
T ss_pred cccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccc
Confidence 246899999999999753 3799999999998765422 22566899999999999999999999999
Q ss_pred ceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCC---CCCCccceecccccEEEEEEeCCEEEE
Q 006591 541 ERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNK---NNATWSLSRVAKFGYLRGHATKQEIQL 617 (639)
Q Consensus 541 eRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~---~~~~ws~~~~~~~Gy~~v~v~~~~L~~ 617 (639)
++..+. ..++.||++|++|........ ..+.|..++...+||.+++|++++|++
T Consensus 214 ~~~~~~-----------------------~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~~~l~~ 270 (277)
T cd07378 214 QHIKDD-----------------------GSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTKEELTV 270 (277)
T ss_pred eeeecC-----------------------CCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEecCEEEE
Confidence 987421 136789999998876433221 133678888889999999999999999
Q ss_pred EEEECCCC
Q 006591 618 EFVNADTR 625 (639)
Q Consensus 618 e~~~~~dG 625 (639)
+|++ .+|
T Consensus 271 ~~~~-~~g 277 (277)
T cd07378 271 RFYD-ADG 277 (277)
T ss_pred EEEC-CCC
Confidence 9996 454
No 6
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.95 E-value=6.1e-27 Score=241.44 Aligned_cols=241 Identities=17% Similarity=0.168 Sum_probs=171.1
Q ss_pred CceEEEEEecCCCCCCCCCCcc--ccCcChHHHHHHHHHHhhcC--CCcEEEEcCCccccCCcH----HHHHHHHHhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEH--YIQPGSLSVVKAMSDEVNNG--NVDSVFHIGDISYATGFL----VEWDFFLHQITP 397 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~--~~~pg~~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~----~~wd~f~~~l~~ 397 (639)
++++|++++|+|.+........ .........++++++.+.+. +||+|+++||+++..... .+|+.|.+.++.
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 5799999999999854321110 00112234567777777665 999999999999775432 356677777777
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCC------CC
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDW------WL 471 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~------~~ 471 (639)
+...+|+++++||||...... .+....|...|. ..||+|++|+++||+|||.... ..
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~----------~~~~~~f~~~~g-------~~~y~~~~~~~~~i~lds~~~~~~~~~~~~ 145 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPT----------EESIKDYRDVFG-------DDYFSFWVGGVFFIVLNSQLFFDPSEVPEL 145 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCC----------hhHHHHHHHHhC-------CcceEEEECCEEEEEeccccccCccccccc
Confidence 666899999999999842110 000112333332 3589999999999999996432 24
Q ss_pred CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCC----chhHHHHHHHHHHHHhCCCeEEEeCcccccceeeccc
Q 006591 472 NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFL----SVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVF 547 (639)
Q Consensus 472 g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~----~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~ 547 (639)
..+|++||+++|+++.+.+.+++||++|+|++....... ......+++|.++|++++|+++|+||+|.+++.. +
T Consensus 146 ~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~--~ 223 (262)
T cd07395 146 AQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR--Y 223 (262)
T ss_pred hHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE--E
Confidence 579999999999987544567899999999986443111 2234568899999999999999999999987632 1
Q ss_pred CCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEE
Q 006591 548 RNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVN 621 (639)
Q Consensus 548 ~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~ 621 (639)
.++.+++++++|..+.. ...||..+++++++++.|++.
T Consensus 224 -----------------------~g~~~~~~~~~~~~~~~-------------~~~g~~~~~v~~~~~~~~~~~ 261 (262)
T cd07395 224 -----------------------GGLEMVVTSAIGAQLGN-------------DKSGLRIVKVTEDKIVHEYYS 261 (262)
T ss_pred -----------------------CCEEEEEcCceecccCC-------------CCCCcEEEEECCCceeeeeee
Confidence 23456777777754321 246999999999999999974
No 7
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=4.2e-25 Score=217.62 Aligned_cols=267 Identities=21% Similarity=0.319 Sum_probs=172.8
Q ss_pred EEECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHH-HHHHh
Q 006591 316 QFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWD-FFLHQ 394 (639)
Q Consensus 316 ~F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd-~f~~~ 394 (639)
+|.-++.+ +.+++|+++||+|.... +.| .++..+|.+..+..++||||.+||++|++|...+.| +|.+.
T Consensus 33 ~l~~p~~~-dgslsflvvGDwGr~g~------~nq---s~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~s 102 (336)
T KOG2679|consen 33 RLYDPAKS-DGSLSFLVVGDWGRRGS------FNQ---SQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDS 102 (336)
T ss_pred hhcCCCCC-CCceEEEEEcccccCCc------hhH---HHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhh
Confidence 35544443 47899999999994432 111 344455555555679999999999999998765544 33333
Q ss_pred hhhhh----cCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc---cccCCCCCCCCCCeEE----EE--eCCEEEE
Q 006591 395 ITPVA----SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE---TYFPMPTPSKDRPWYS----IE--QASVHFT 461 (639)
Q Consensus 395 l~~l~----~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~---~~f~~P~~~~~~~~Ys----fd--~G~v~fi 461 (639)
.+.+. -+.|||.+.||||+..+-.. +....|+ ++|.-|. .||. .+ .=++.++
T Consensus 103 F~nIYT~pSLQkpWy~vlGNHDyrGnV~A----------Qls~~l~~~d~RW~c~r-----sf~~~ae~ve~f~v~~~~f 167 (336)
T KOG2679|consen 103 FENIYTAPSLQKPWYSVLGNHDYRGNVEA----------QLSPVLRKIDKRWICPR-----SFYVDAEIVEMFFVDTTPF 167 (336)
T ss_pred hhhcccCcccccchhhhccCccccCchhh----------hhhHHHHhhccceeccc-----HHhhcceeeeeeccccccc
Confidence 33332 36799999999998532211 0000111 2232221 1110 00 1123333
Q ss_pred EEeCCC-------CCC-------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC
Q 006591 462 VISTEH-------DWW-------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN 527 (639)
Q Consensus 462 ~LDT~~-------~~~-------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y 527 (639)
++|+-. +|. ....|+.||+..|++ ++++|+||++|||+.+.+. .+...+++++|.|||+++
T Consensus 168 ~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~--HG~T~eL~~~LlPiL~~n 242 (336)
T KOG2679|consen 168 MDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGH--HGPTKELEKQLLPILEAN 242 (336)
T ss_pred hhhheecccccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhc--cCChHHHHHHHHHHHHhc
Confidence 333321 121 236788999999997 6789999999999988775 344578899999999999
Q ss_pred CCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCcc----ceecccc
Q 006591 528 KVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWS----LSRVAKF 603 (639)
Q Consensus 528 ~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws----~~~~~~~ 603 (639)
+||++++||+|+.|...- .+ ++.-|+++|+|...... ...++.|. .+.....
T Consensus 243 ~VdlY~nGHDHcLQhis~------------~e-----------~~iqf~tSGagSkaw~g-~~~~~~~~p~~lkF~Ydgq 298 (336)
T KOG2679|consen 243 GVDLYINGHDHCLQHISS------------PE-----------SGIQFVTSGAGSKAWRG-TDHNPEVNPKELKFYYDGQ 298 (336)
T ss_pred CCcEEEecchhhhhhccC------------CC-----------CCeeEEeeCCcccccCC-CccCCccChhheEEeeCCC
Confidence 999999999999998520 01 12335666655443322 11233343 3556677
Q ss_pred cEEEEEEeCCEEEEEEEECCCCeEEEEEEEEecC
Q 006591 604 GYLRGHATKQEIQLEFVNADTRKVEDSFRIIRRQ 637 (639)
Q Consensus 604 Gy~~v~v~~~~L~~e~~~~~dG~v~D~f~I~k~~ 637 (639)
||.-++++..++++.|++ ..|+++......|..
T Consensus 299 Gfmsv~is~~e~~vvfyD-~~G~~Lhk~~t~kr~ 331 (336)
T KOG2679|consen 299 GFMSVEISHSEARVVFYD-VSGKVLHKWSTSKRS 331 (336)
T ss_pred ceEEEEEecceeEEEEEe-ccCceEEEeeccccc
Confidence 999999999999999998 589999988877653
No 8
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.90 E-value=3.6e-22 Score=221.68 Aligned_cols=241 Identities=21% Similarity=0.320 Sum_probs=125.2
Q ss_pred ceEEEEEecCCCCCcEEEEEEccCC-CccceeeEEECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHH
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSEA-VDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSD 362 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~~-~~~S~~~~F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~ 362 (639)
.+++++.++||+|+|+|+||+..++ ...|..++|+|+|......+||++++|.+.... ....++.|
T Consensus 61 d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~~~r~a~~SC~~~~~~-----------~~~~~~~~-- 127 (453)
T PF09423_consen 61 DFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPDPFRFAFGSCQNYEDG-----------YFPAYRRI-- 127 (453)
T ss_dssp TTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT-----EEEEEE----CCC--------------HHHHHH--
T ss_pred CeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCCceEEEEECCCCcccC-----------hHHHHHhh--
Confidence 5889999999999999999999853 356788999999876556799999999885321 12334444
Q ss_pred Hhhc-CCCcEEEEcCCccccCCc-----------------------HHH----HHHHH--HhhhhhhcCCceEEecCCCC
Q 006591 363 EVNN-GNVDSVFHIGDISYATGF-----------------------LVE----WDFFL--HQITPVASRVSYMTAIGNHE 412 (639)
Q Consensus 363 ~i~~-~~pDfVl~~GDl~y~~g~-----------------------~~~----wd~f~--~~l~~l~~~vP~~~v~GNHD 412 (639)
.+ .+|||+||+||.+|+++. ... |..+. ..++.+.+.+|++.++.+||
T Consensus 128 --a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHd 205 (453)
T PF09423_consen 128 --AERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHD 205 (453)
T ss_dssp --TT-S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STT
T ss_pred --hccCCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCce
Confidence 34 689999999999999852 111 22121 34566678999999999999
Q ss_pred cCCCCCCCccCCCC-CCCc-------cccccccccCCCC----CCCCCCeEEEEeCC-EEEEEEeCCCCC----------
Q 006591 413 RDYVNSGSVYSTPD-SGGE-------CGIPYETYFPMPT----PSKDRPWYSIEQAS-VHFTVISTEHDW---------- 469 (639)
Q Consensus 413 ~~~~~~~~~y~~~d-sgge-------~~~~y~~~f~~P~----~~~~~~~Ysfd~G~-v~fi~LDT~~~~---------- 469 (639)
+..+..+..-...+ ..+. ....|.++.+... ......|++|++|+ +.|++||++...
T Consensus 206 i~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~ 285 (453)
T PF09423_consen 206 IGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGD 285 (453)
T ss_dssp TSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE
T ss_pred ecccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhcccccccccccc
Confidence 95332211000000 0000 0112333333321 11245789999999 999999997532
Q ss_pred -----------CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC------------CCCchhHHHHHHHHHHHHh
Q 006591 470 -----------WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD------------GFLSVDKFFVKSVEPLLLK 526 (639)
Q Consensus 470 -----------~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~------------~~~~~~~~~r~~l~~Ll~~ 526 (639)
-+|.+|++||++.|++ +.++|+|++.-.|+..... .+.+ -...|++|..+|.+
T Consensus 286 ~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g-~~~er~~Ll~~l~~ 361 (453)
T PF09423_consen 286 TCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDG-YPAERQRLLDFLRE 361 (453)
T ss_dssp --HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGG-SHHHHHHHHHHHHH
T ss_pred ccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCceecccccccccccccCCCchhh-CHHHHHHHHHHHHh
Confidence 1479999999999996 4589999998888744321 1112 24568999999998
Q ss_pred CCCe--EEEeCccccccee
Q 006591 527 NKVD--LVLFGHVHNYERT 543 (639)
Q Consensus 527 y~Vd--lvlsGH~H~YeRt 543 (639)
.++. ++|+|++|...-.
T Consensus 362 ~~~~~vV~LSGDvH~~~~~ 380 (453)
T PF09423_consen 362 SGIRNVVFLSGDVHASAAS 380 (453)
T ss_dssp TT---EEEEE-SSSSEEEE
T ss_pred hCCCCEEEEecCcchheee
Confidence 8875 7899999996654
No 9
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.90 E-value=2.3e-22 Score=208.02 Aligned_cols=194 Identities=20% Similarity=0.232 Sum_probs=132.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc--HHHHHHHHHhhhhhhcCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF--LVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~--~~~wd~f~~~l~~l~~~vP~~ 405 (639)
|||++++|+|..........+ ...+...++++++.+++.+||+|+++||+++.... ..+|+.+.+.++.+ .+|++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~-~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~~ 77 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRY-YRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPVH 77 (267)
T ss_pred CeEEEEeccccccCCCcccch-HHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCEE
Confidence 699999999966432111111 11245677888888888889999999999965432 14566666666554 68999
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC-----------------
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD----------------- 468 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~----------------- 468 (639)
+++||||....... .+.. +.....+..||+|++++++||+||+...
T Consensus 78 ~v~GNHD~~~~~~~--------------~~~~---~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~ 140 (267)
T cd07396 78 HVLGNHDLYNPSRE--------------YLLL---YTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADD 140 (267)
T ss_pred EecCccccccccHh--------------hhhc---ccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHH
Confidence 99999998522100 0000 1111123569999999999999998531
Q ss_pred -----------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCe
Q 006591 469 -----------------WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVD 530 (639)
Q Consensus 469 -----------------~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~Vd 530 (639)
...+.+|++||++.|+++.. +..++||++|+|++.... ........++.+.++++++ +|+
T Consensus 141 ~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~-~~~~~~~~~~~~~~ll~~~~~V~ 218 (267)
T cd07396 141 NSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPEST-SPHGLLWNHEEVLSILRAYGCVK 218 (267)
T ss_pred hchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCC-CccccccCHHHHHHHHHhCCCEE
Confidence 13468999999999998643 234589999999876542 1111112257889999996 899
Q ss_pred EEEeCccccccee
Q 006591 531 LVLFGHVHNYERT 543 (639)
Q Consensus 531 lvlsGH~H~YeRt 543 (639)
++|+||+|.++..
T Consensus 219 ~v~~GH~H~~~~~ 231 (267)
T cd07396 219 ACISGHDHEGGYA 231 (267)
T ss_pred EEEcCCcCCCCcc
Confidence 9999999998753
No 10
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.90 E-value=1.3e-22 Score=205.96 Aligned_cols=228 Identities=14% Similarity=0.137 Sum_probs=155.7
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC--CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG--NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
||++++|+|.+..... ..........++++++.+++. +||+|+++||+++. +...+|+.+.+.++.+ .+|++.
T Consensus 1 r~~~iSDlH~~~~~~~--~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~~ 75 (240)
T cd07402 1 LLAQISDLHLRADGEG--ALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVYL 75 (240)
T ss_pred CEEEEeCCccCCCCcc--eecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEEE
Confidence 6999999998754211 011112356678888887765 99999999999965 4556778888877766 789999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCC----CCCHHHHHHHHHH
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDW----WLNSEQYKWIQKD 482 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~----~~g~~Q~~WL~~~ 482 (639)
++||||... .+.+.|..........+|+|+.++++||+||+.... ....+|++||++.
T Consensus 76 v~GNHD~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~ 137 (240)
T cd07402 76 LPGNHDDRA------------------AMRAVFPELPPAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAA 137 (240)
T ss_pred eCCCCCCHH------------------HHHHhhccccccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHH
Confidence 999999731 112222111001234688999999999999986432 2468999999999
Q ss_pred HhhccCCCCCeEEEEeccCCccCCC-CCCchhHHHHHHHHHHHHhC-CCeEEEeCcccccceeecccCCeecCCCccCCC
Q 006591 483 LASVDRSKTPWLIFAGHRPMYSSLD-GFLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDN 560 (639)
Q Consensus 483 La~~~r~~~pwvIV~~H~P~y~~~~-~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~ 560 (639)
|++.. ..++|+++|+|++.... .........++.+.+++.++ +|+++|+||.|......
T Consensus 138 L~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~---------------- 198 (240)
T cd07402 138 LAEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS---------------- 198 (240)
T ss_pred HHhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE----------------
Confidence 99853 34588999999976542 11111112367899999999 99999999999976532
Q ss_pred CCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEe
Q 006591 561 GIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHAT 611 (639)
Q Consensus 561 G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~ 611 (639)
.++..++++|+.|..+... ++-.......+||..+.+-
T Consensus 199 ---------~~g~~~~~~gs~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 236 (240)
T cd07402 199 ---------WGGIPLLTAPSTCHQFAPD----LDDFALDALAPGYRALSLH 236 (240)
T ss_pred ---------ECCEEEEEcCcceeeecCC----CCcccccccCCCCcEEEEe
Confidence 1245678888888754322 1222223345788888773
No 11
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.85 E-value=2.6e-20 Score=191.53 Aligned_cols=192 Identities=18% Similarity=0.211 Sum_probs=127.6
Q ss_pred EEEEecCCCCCCCCCCccccCcChHH-HHHHHHHHhhcCCCcEEEEcCCccccCC--------cHHHHHHHHHhhhhhhc
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLS-VVKAMSDEVNNGNVDSVFHIGDISYATG--------FLVEWDFFLHQITPVAS 400 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~-~~~~l~~~i~~~~pDfVl~~GDl~y~~g--------~~~~wd~f~~~l~~l~~ 400 (639)
|++++|+|.+.... .... ..+.+.+.+++.+||+|+++||+++... ...+|+.|++.+.....
T Consensus 2 ~~~iSDlH~g~~~~--------~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (256)
T cd07401 2 FVHISDIHVSSFHP--------PNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSV 73 (256)
T ss_pred EEEecccccCCcCc--------hhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCC
Confidence 78999999875421 1111 1244566677789999999999996532 24578888887765432
Q ss_pred --CCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEE--EeCCEEEEEEeCCCC--------
Q 006591 401 --RVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSI--EQASVHFTVISTEHD-------- 468 (639)
Q Consensus 401 --~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysf--d~G~v~fi~LDT~~~-------- 468 (639)
..|++.++||||...... .+. ....|.++...... ...+|.+ +.|+++||+|||...
T Consensus 74 ~~~~p~~~v~GNHD~~~~~~------~~~---~~~~~~~y~~~~~~--~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~ 142 (256)
T cd07401 74 INKEKWFDIRGNHDLFNIPS------LDS---ENNYYRKYSATGRD--GSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFN 142 (256)
T ss_pred CCcceEEEeCCCCCcCCCCC------ccc---hhhHHHHhheecCC--CccceEEEecCCCEEEEEEcCccCCCCCCCCc
Confidence 589999999999831110 000 01123333222111 1223333 359999999999642
Q ss_pred --CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecc
Q 006591 469 --WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSV 546 (639)
Q Consensus 469 --~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~ 546 (639)
.....+|++||++.|++.. +.+++||++|+|++....... .. ...+.++|++++|+++|+||.|.+++-.|+
T Consensus 143 ~~g~l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~~---~~-~~~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 143 FFGSLDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPSA---KS-SSKFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred eeccCCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCCc---ch-hHHHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 2356899999999999753 346899999999965332111 11 223999999999999999999999996664
No 12
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.85 E-value=1.2e-19 Score=188.48 Aligned_cols=250 Identities=12% Similarity=0.121 Sum_probs=152.3
Q ss_pred EECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHh
Q 006591 317 FRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQ 394 (639)
Q Consensus 317 F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~ 394 (639)
.++.+.. .++++|++++|+|....... ..........++++++.+++ .+||+|+++||+++. +...+++.+.+.
T Consensus 5 ~~~~~~~-~~~~~i~~iSD~Hl~~~~~~--~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~-~~~~~~~~~~~~ 80 (275)
T PRK11148 5 LTLPLAG-EARVRILQITDTHLFADEHE--TLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQD-HSSEAYQHFAEG 80 (275)
T ss_pred cccccCC-CCCEEEEEEcCcccCCCCCC--ceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCC-CCHHHHHHHHHH
Confidence 3454443 37899999999997432110 00011124567777777654 479999999999964 556678888887
Q ss_pred hhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC----CC
Q 006591 395 ITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD----WW 470 (639)
Q Consensus 395 l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~----~~ 470 (639)
++.+ .+|+++++||||.... +.+.+... +....++.+..++++||+||+... ..
T Consensus 81 l~~l--~~Pv~~v~GNHD~~~~------------------~~~~~~~~--~~~~~~~~~~~~~~~~i~Lds~~~g~~~G~ 138 (275)
T PRK11148 81 IAPL--RKPCVWLPGNHDFQPA------------------MYSALQDA--GISPAKHVLIGEHWQILLLDSQVFGVPHGE 138 (275)
T ss_pred Hhhc--CCcEEEeCCCCCChHH------------------HHHHHhhc--CCCccceEEecCCEEEEEecCCCCCCcCCE
Confidence 7766 6899999999997310 11111100 001123334455699999999642 23
Q ss_pred CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-CCCchhHHHHHHHHHHHHhC-CCeEEEeCcccccceeecccC
Q 006591 471 LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-GFLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTCSVFR 548 (639)
Q Consensus 471 ~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~p~~~ 548 (639)
.+.+|++||++.|+++. ....||++|||+..... ..........++|.+++++| +|+++|+||+|......
T Consensus 139 l~~~ql~wL~~~L~~~~---~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~---- 211 (275)
T PRK11148 139 LSEYQLEWLERKLADAP---ERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDLD---- 211 (275)
T ss_pred eCHHHHHHHHHHHhhCC---CCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhce----
Confidence 57899999999999753 22355666665543322 11111112357899999998 89999999999854321
Q ss_pred CeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEe-CCEEEEEEEECCC
Q 006591 549 NKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHAT-KQEIQLEFVNADT 624 (639)
Q Consensus 549 ~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~-~~~L~~e~~~~~d 624 (639)
.+|..++++++.+...... .... .......||..++++ ++.+..+.++..+
T Consensus 212 ---------------------~~gi~~~~~ps~~~q~~~~---~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~~~ 263 (275)
T PRK11148 212 ---------------------WNGRRLLATPSTCVQFKPH---CTNF-TLDTVAPGWRELELHADGSLETEVHRLAD 263 (275)
T ss_pred ---------------------ECCEEEEEcCCCcCCcCCC---CCcc-ccccCCCcEEEEEEcCCCcEEEEEEEcCC
Confidence 1234456666655432111 1111 111234699999995 5568777776544
No 13
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.84 E-value=4.6e-20 Score=195.09 Aligned_cols=291 Identities=22% Similarity=0.331 Sum_probs=188.8
Q ss_pred CC-ceeEEeeccCCCCceEEEEEeCC--------CCCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 215 KP-LYGHLSSVDSTGTSMRLTWVSGD--------KEPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 215 ~P-~~~~l~~~~~~~~sm~v~W~T~~--------~~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
.| .+...+.++.. ..-.|.|+.-+ +....+||.++.. .+++. .-+++..+|+ ..+
T Consensus 36 rpaF~~GVaSGDp~-~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~--f~~iv------r~gt~~a~p~-------~dh 99 (522)
T COG3540 36 RPAFTHGVASGDPT-ATSVVIWTRLDPEPLNGGRPVPVIWEVSTDEN--FSNIV------RKGTVIASPE-------LDH 99 (522)
T ss_pred CCccccccccCCCC-CCeEEEEEccCCccccCCCCcceEEEecCCcc--HHHHH------hcCCccCCcc-------cCc
Confidence 45 44455666654 44588898665 3445777775433 22221 1122223344 258
Q ss_pred EEEEEecCCCCCcEEEEEEccCCCccceeeEEECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN 365 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~ 365 (639)
.+++.++||+|++.|+||+..++ .-|..++|+|+|+.+ ..++++.+||........ +-..+. +.+.
T Consensus 100 tv~v~~~gL~P~~~yfYRf~~~~-~~spvGrtrTapa~~-~~i~~~~fa~ascQ~~~~--------gy~~aY----~~ma 165 (522)
T COG3540 100 TVHVDLRGLSPDQDYFYRFKAGD-ERSPVGRTRTAPAPG-RAIRFVWFADASCQGWEI--------GYMTAY----KTMA 165 (522)
T ss_pred eEEEeccCCCCCceEEEEEeeCC-ccccccccccCCCCC-Ccchhhhhhhcccccccc--------chhHHH----HHHH
Confidence 89999999999999999998764 357899999999986 678888888876544321 122333 3445
Q ss_pred cCCCcEEEEcCCccccCCcHH-----------------------------HHHHHH--HhhhhhhcCCceEEecCCCCcC
Q 006591 366 NGNVDSVFHIGDISYATGFLV-----------------------------EWDFFL--HQITPVASRVSYMTAIGNHERD 414 (639)
Q Consensus 366 ~~~pDfVl~~GDl~y~~g~~~-----------------------------~wd~f~--~~l~~l~~~vP~~~v~GNHD~~ 414 (639)
+.+|||+||.||.+|+.|-.. +|..+. ..++...+..|+++.|.+||..
T Consensus 166 ~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~ 245 (522)
T COG3540 166 KEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVA 245 (522)
T ss_pred hcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEecccccc
Confidence 678999999999999975321 122221 2455566789999999999997
Q ss_pred CCCCCCccCCCCC-CCcc---------ccccccccCCCCCC---CCCCeEEEEeCC-EEEEEEeCCCCC-----------
Q 006591 415 YVNSGSVYSTPDS-GGEC---------GIPYETYFPMPTPS---KDRPWYSIEQAS-VHFTVISTEHDW----------- 469 (639)
Q Consensus 415 ~~~~~~~y~~~ds-gge~---------~~~y~~~f~~P~~~---~~~~~Ysfd~G~-v~fi~LDT~~~~----------- 469 (639)
.+.....-.. |+ -.+. ..+|.++.++.... ....|.+|.||+ +.|.+||++.+.
T Consensus 246 NN~~~~~~~n-D~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~ 324 (522)
T COG3540 246 NNWSNSIDEN-DSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPP 324 (522)
T ss_pred cccccccccc-CCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcc
Confidence 5433211111 22 1111 12343333322111 246799999999 689999997543
Q ss_pred -----------CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCcc----CC---CC------CCchhHHHHHHHHHHHH
Q 006591 470 -----------WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYS----SL---DG------FLSVDKFFVKSVEPLLL 525 (639)
Q Consensus 470 -----------~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~----~~---~~------~~~~~~~~r~~l~~Ll~ 525 (639)
-.|..|.+||+..|.+ +++.|+|+..-.|+-- .. .. .......-|+.|...++
T Consensus 325 ~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~ 401 (522)
T COG3540 325 NCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIA 401 (522)
T ss_pred hhhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHH
Confidence 1479999999999996 7899999988877621 11 00 00111344889999999
Q ss_pred hCCCe--EEEeCcccc
Q 006591 526 KNKVD--LVLFGHVHN 539 (639)
Q Consensus 526 ~y~Vd--lvlsGH~H~ 539 (639)
..++. ++|+|++|.
T Consensus 402 ~~~~~N~V~LtgDvH~ 417 (522)
T COG3540 402 DRKIRNTVVLTGDVHY 417 (522)
T ss_pred hcCCCCcEEEechhHH
Confidence 99886 899999997
No 14
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.82 E-value=1.2e-19 Score=181.73 Aligned_cols=158 Identities=20% Similarity=0.181 Sum_probs=118.3
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh-cCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA-SRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~-~~vP~~~ 406 (639)
|||++++|+|...... .......+++|++.+++.+||+|+++||+++......+|+.+.+.++.+. ..+|+++
T Consensus 1 f~~~~~~D~q~~~~~~------~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 74 (214)
T cd07399 1 FTLAVLPDTQYYTESY------PEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSV 74 (214)
T ss_pred CEEEEecCCCcCCcCC------HHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEE
Confidence 6899999999764311 01123466777887777899999999999976554678999999888886 6799999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
++||||. ++.+|+ ....+|++||++.|++.
T Consensus 75 ~~GNHD~----------------------------------------------~~~ld~----~~~~~ql~WL~~~L~~~ 104 (214)
T cd07399 75 LAGNHDL----------------------------------------------VLALEF----GPRDEVLQWANEVLKKH 104 (214)
T ss_pred ECCCCcc----------------------------------------------hhhCCC----CCCHHHHHHHHHHHHHC
Confidence 9999993 122232 23489999999999974
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCch-----hHHHHHHHHHHHHhC-CCeEEEeCcccccceee
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSV-----DKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTC 544 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~-----~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~ 544 (639)
+ ..++||++|+|++......... ....++.|++|++++ +|+++|+||+|.+.+..
T Consensus 105 ~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 105 P---DRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred C---CCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 2 3458999999998655422211 123356788999999 79999999999998864
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.74 E-value=1.7e-17 Score=174.20 Aligned_cols=183 Identities=15% Similarity=0.192 Sum_probs=123.2
Q ss_pred HHHHHHHHHHhhcC--CCcEEEEcCCccccCCcHH--------HHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccC
Q 006591 354 LSVVKAMSDEVNNG--NVDSVFHIGDISYATGFLV--------EWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYS 423 (639)
Q Consensus 354 ~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~~--------~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~ 423 (639)
...++++++.+++. +|||||++||+++...... .+..+.+.++.....+|+++++||||....+....
T Consensus 52 ~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~-- 129 (296)
T cd00842 52 WRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPP-- 129 (296)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCC--
Confidence 46677777777665 9999999999997654321 24556677777778999999999999853221100
Q ss_pred CCCCCCccccccccccC--CCCCC----CCCCeEEEE-eCCEEEEEEeCCCCC-----------CCCHHHHHHHHHHHhh
Q 006591 424 TPDSGGECGIPYETYFP--MPTPS----KDRPWYSIE-QASVHFTVISTEHDW-----------WLNSEQYKWIQKDLAS 485 (639)
Q Consensus 424 ~~dsgge~~~~y~~~f~--~P~~~----~~~~~Ysfd-~G~v~fi~LDT~~~~-----------~~g~~Q~~WL~~~La~ 485 (639)
..........+...|. ++... ....||++. .++++||+|||.... ....+|++||+++|++
T Consensus 130 -~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~ 208 (296)
T cd00842 130 -NNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQE 208 (296)
T ss_pred -cccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHH
Confidence 0000000011112221 22211 135689998 899999999997421 2357999999999998
Q ss_pred ccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCC--CeEEEeCccccccee
Q 006591 486 VDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNK--VDLVLFGHVHNYERT 543 (639)
Q Consensus 486 ~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~--VdlvlsGH~H~YeRt 543 (639)
+.+.+ ..++|++|+|+....... .....+.+.+|+++|+ |.++|+||+|..+..
T Consensus 209 a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 209 AEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred HHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 75333 457889999997654311 1355788999999996 778999999997754
No 16
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.67 E-value=1.3e-16 Score=149.32 Aligned_cols=195 Identities=23% Similarity=0.242 Sum_probs=104.9
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHH-HhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFL-HQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~-~~l~~l~~~vP~~~ 406 (639)
|||+++||+|...... .. ....+.+.....++|+||++||+++.......+.... ..........|+++
T Consensus 1 ~ri~~isD~H~~~~~~---------~~-~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (200)
T PF00149_consen 1 MRILVISDLHGGYDDD---------SD-AFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYF 70 (200)
T ss_dssp EEEEEEEBBTTTHHHH---------CH-HHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred CeEEEEcCCCCCCcch---------hH-HHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccc
Confidence 6999999999763210 01 2445555556789999999999998766554444322 12333456899999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCC-C-CCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPT-P-SKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~-~-~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La 484 (639)
++||||+......... ............. . ...+...........+..............+..|+...+.
T Consensus 71 ~~GNHD~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (200)
T PF00149_consen 71 ILGNHDYYSGNSFYGF--------YDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLL 142 (200)
T ss_dssp EE-TTSSHHHHHHHHH--------HHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHH
T ss_pred cccccccceecccccc--------ccccccccccccccccccCcceeeecccccccccccccccccccccchhccccccc
Confidence 9999998521100000 0000000000000 0 0000001122222222222221111222333333333322
Q ss_pred hccCCCCCeEEEEeccCCccCCCCCCc--hhHHHHHHHHHHHHhCCCeEEEeCccccc
Q 006591 485 SVDRSKTPWLIFAGHRPMYSSLDGFLS--VDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540 (639)
Q Consensus 485 ~~~r~~~pwvIV~~H~P~y~~~~~~~~--~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Y 540 (639)
...+...+++||++|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 143 ~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 143 LLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 222345678999999999877642211 01234788999999999999999999986
No 17
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.66 E-value=8.9e-16 Score=157.60 Aligned_cols=161 Identities=17% Similarity=0.176 Sum_probs=106.7
Q ss_pred cCCCcEEEEcCCccccCC--cHHHHH----HHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCcccccccccc
Q 006591 366 NGNVDSVFHIGDISYATG--FLVEWD----FFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYF 439 (639)
Q Consensus 366 ~~~pDfVl~~GDl~y~~g--~~~~wd----~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f 439 (639)
..+||+|+++||+++.+. ...+|. +|.+.+.++....|++.++||||+.+... ........|+++|
T Consensus 43 ~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~--------~~~~~~~rf~~~F 114 (257)
T cd08163 43 QLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNG--------VVLPVRQRFEKYF 114 (257)
T ss_pred hcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCC--------CCHHHHHHHHHHh
Confidence 368999999999997532 123453 44444444333579999999999854211 0001123566677
Q ss_pred CCCCCCCCCCeEEEEeCCEEEEEEeCCCC-----CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-CCC---
Q 006591 440 PMPTPSKDRPWYSIEQASVHFTVISTEHD-----WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-GFL--- 510 (639)
Q Consensus 440 ~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~-----~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-~~~--- 510 (639)
+. ..|.|++|+++||+||+... .....+|.+||++.|+.... ...+||++|+|+|.... ...
T Consensus 115 g~-------~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~--~~p~ILl~H~Plyr~~~~~cg~~r 185 (257)
T cd08163 115 GP-------TSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK--SKPRILLTHVPLYRPPNTSCGPLR 185 (257)
T ss_pred CC-------CceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC--CCcEEEEeccccccCCCCCCCCcc
Confidence 52 35899999999999999632 23457899999999986432 23489999999986542 100
Q ss_pred --------chhH----HH-HHHHHHHHHhCCCeEEEeCccccccee
Q 006591 511 --------SVDK----FF-VKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 511 --------~~~~----~~-r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
.... .+ .+.-..||++.+..+||+||+|.|-..
T Consensus 186 e~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 186 ESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred ccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 0000 01 234456788889999999999998765
No 18
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.64 E-value=2.3e-15 Score=148.94 Aligned_cols=162 Identities=17% Similarity=0.231 Sum_probs=105.0
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHH-HHHHHHHhhhhhh-cCCce
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLV-EWDFFLHQITPVA-SRVSY 404 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~-~wd~f~~~l~~l~-~~vP~ 404 (639)
.+||++++|+|.+....... .......+.+.+.+.+++.+||+|+++||+++...... .++.+.+.++++. ..+|+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~ 79 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCE--GCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPW 79 (199)
T ss_pred ceEEEEEeeecccCCCCCCC--cchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCE
Confidence 58999999999876432100 00011344555655566789999999999998765432 2444445555543 37999
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La 484 (639)
++++||||.. -.....|++||+++|+
T Consensus 80 ~~~~GNHD~~------------------------------------------------------g~l~~~ql~wL~~~l~ 105 (199)
T cd07383 80 AATFGNHDGY------------------------------------------------------DWIRPSQIEWFKETSA 105 (199)
T ss_pred EEECccCCCC------------------------------------------------------CCCCHHHHHHHHHHHH
Confidence 9999999920 1234689999999999
Q ss_pred hcc--CCCCCeEEEEeccCCccCCCCC-----------C-chhHHHHH-HHHHHHHhCCCeEEEeCcccccceee
Q 006591 485 SVD--RSKTPWLIFAGHRPMYSSLDGF-----------L-SVDKFFVK-SVEPLLLKNKVDLVLFGHVHNYERTC 544 (639)
Q Consensus 485 ~~~--r~~~pwvIV~~H~P~y~~~~~~-----------~-~~~~~~r~-~l~~Ll~~y~VdlvlsGH~H~YeRt~ 544 (639)
+.. +....+.++++|+|+....... . ........ .+..+.+..+|+++|+||+|.++...
T Consensus 106 ~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 106 ALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred HHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 863 2344678999999986532100 0 00011122 33444566799999999999987654
No 19
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.63 E-value=6.3e-15 Score=149.45 Aligned_cols=191 Identities=17% Similarity=0.151 Sum_probs=116.8
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC--CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG--NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+.+++|+|....-........+.+.+..+++.+.+++. +||+|+++||+++. +...+....++.++.+ ..|++++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~-~~~~~~~~~l~~l~~l--~~~v~~V 77 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA-MKLEEAKLDLAWIDAL--PGTKVLL 77 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC-CChHHHHHHHHHHHhC--CCCeEEE
Confidence 36789999763210000112233456666766665544 89999999999953 3333333444444443 3478999
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCC-CCCeEEEEeCCEEEEEEeCCC----CC-------------
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSK-DRPWYSIEQASVHFTVISTEH----DW------------- 469 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~-~~~~Ysfd~G~v~fi~LDT~~----~~------------- 469 (639)
+||||+.. .. ...+++.+.- .+. -....++.++++.|+.++... .+
T Consensus 78 ~GNHD~~~-~~-------------~~~~~~~l~~--~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
T cd07393 78 KGNHDYWW-GS-------------ASKLRKALEE--SRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDE 141 (232)
T ss_pred eCCccccC-CC-------------HHHHHHHHHh--cCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHH
Confidence 99999721 10 0111111110 000 000235567889999876311 11
Q ss_pred CCCHHHHHHHHHHHhhccCCC-CCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeeccc
Q 006591 470 WLNSEQYKWIQKDLASVDRSK-TPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVF 547 (639)
Q Consensus 470 ~~g~~Q~~WL~~~La~~~r~~-~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~ 547 (639)
....+|++||++.|+++.... ..++|+++|+|++.... . .+.+..++++++|+++|+||+|.+++..|+.
T Consensus 142 ~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~---~-----~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~ 212 (232)
T cd07393 142 KIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENG---D-----DSPISKLIEEYGVDICVYGHLHGVGRDRAIN 212 (232)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC---C-----HHHHHHHHHHcCCCEEEECCCCCCccccccc
Confidence 013569999999999764322 24799999999876542 1 2466788899999999999999999887663
No 20
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.57 E-value=9.5e-14 Score=150.54 Aligned_cols=94 Identities=20% Similarity=0.353 Sum_probs=72.6
Q ss_pred CCCeEEEE-eCCEEEEEEeCCCC-----CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCC-----CchhHH
Q 006591 447 DRPWYSIE-QASVHFTVISTEHD-----WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGF-----LSVDKF 515 (639)
Q Consensus 447 ~~~~Ysfd-~G~v~fi~LDT~~~-----~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~-----~~~~~~ 515 (639)
+..||+|+ .++++||+|||... ....++|++||+++|++. +.+++||++|||++...... ......
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 35699999 89999999999642 245799999999999963 34679999999998654311 111122
Q ss_pred HHHHHHHHHHhC-CCeEEEeCccccccee
Q 006591 516 FVKSVEPLLLKN-KVDLVLFGHVHNYERT 543 (639)
Q Consensus 516 ~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt 543 (639)
..++|.++|++| +|.++|+||.|....+
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 357899999999 8999999999987654
No 21
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.55 E-value=1e-13 Score=144.16 Aligned_cols=186 Identities=19% Similarity=0.225 Sum_probs=126.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
++|+.++|.|..... ......+.++++.++..+||+|+++||+++. +...+++...+.++......|++++
T Consensus 1 ~~i~~isD~H~~~~~--------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~v 71 (301)
T COG1409 1 MRIAHISDLHLGALG--------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIVV 71 (301)
T ss_pred CeEEEEecCcccccc--------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEee
Confidence 589999999987310 1235678888888888899999999999976 7777788777777755557899999
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEe-CCEEEEEEeCCCC----CCCCHHHHHHHHHH
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQ-ASVHFTVISTEHD----WWLNSEQYKWIQKD 482 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~-G~v~fi~LDT~~~----~~~g~~Q~~WL~~~ 482 (639)
+||||....+ ...+...+.... ..+-.... ++++++.+|+... ...+..|++||++.
T Consensus 72 pGNHD~~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~ 133 (301)
T COG1409 72 PGNHDARVVN--------------GEAFSDQFFNRY----AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEA 133 (301)
T ss_pred CCCCcCCchH--------------HHHhhhhhcccC----cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHH
Confidence 9999985221 112222221110 01111112 6789999999753 34689999999999
Q ss_pred HhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCC--CeEEEeCccccc
Q 006591 483 LASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNK--VDLVLFGHVHNY 540 (639)
Q Consensus 483 La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~--VdlvlsGH~H~Y 540 (639)
|++........+|++.|+|+.................+..++..++ |+++|+||.|..
T Consensus 134 l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 134 LAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 9975433112456767777665443222222233456777788887 999999999986
No 22
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.54 E-value=1.6e-13 Score=133.42 Aligned_cols=167 Identities=18% Similarity=0.122 Sum_probs=103.1
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecC
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIG 409 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~G 409 (639)
++++||+|... ..++. ..+++.++|+|+++||+++. +...+...+ +.++. ...|+++++|
T Consensus 1 i~~~sD~H~~~--------------~~~~~--~~~~~~~~D~vv~~GDl~~~-~~~~~~~~~-~~l~~--~~~p~~~v~G 60 (188)
T cd07392 1 ILAISDIHGDV--------------EKLEA--IILKAEEADAVIVAGDITNF-GGKEAAVEI-NLLLA--IGVPVLAVPG 60 (188)
T ss_pred CEEEEecCCCH--------------HHHHH--HHhhccCCCEEEECCCccCc-CCHHHHHHH-HHHHh--cCCCEEEEcC
Confidence 57899999642 11222 33456789999999999965 333333333 44443 3689999999
Q ss_pred CCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC------CCCCHHHHHHHHHHH
Q 006591 410 NHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD------WWLNSEQYKWIQKDL 483 (639)
Q Consensus 410 NHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~------~~~g~~Q~~WL~~~L 483 (639)
|||...... ......... . -..+.+++++|+.+++... ....++|++|+ +.|
T Consensus 61 NHD~~~~~~---------------~~~~~~~~~----~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l 118 (188)
T cd07392 61 NCDTPEILG---------------LLTSAGLNL----H--GKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRL 118 (188)
T ss_pred CCCCHHHHH---------------hhhcCcEec----C--CCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhh
Confidence 999631100 000000000 0 1245678899999987421 13457899998 444
Q ss_pred hhccCCCCCeEEEEeccCCccCC-CCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 484 ASVDRSKTPWLIFAGHRPMYSSL-DGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 484 a~~~r~~~pwvIV~~H~P~y~~~-~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
+. ...+.+|+++|+|++... ...........+.+.+++++++++++|+||+|.-.
T Consensus 119 ~~---~~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 119 NN---LLAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred hc---cCCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 43 233458999999997631 11111001124678889999999999999999854
No 23
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.51 E-value=1.5e-13 Score=139.86 Aligned_cols=183 Identities=17% Similarity=0.162 Sum_probs=110.8
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
||++++|+|..... .+....++++++.+.+.++|+|+++||++... .+...+++.+..+ ...|++.++
T Consensus 1 ki~~iSDlH~~~~~--------~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v~ 68 (239)
T TIGR03729 1 KIAFSSDLHIDLNH--------FDTEEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFNA 68 (239)
T ss_pred CEEEEEeecCCCCC--------CCHHHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEEC
Confidence 58999999974211 11234577788877778899999999999542 2223444444432 468999999
Q ss_pred CCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC--------------------
Q 006591 409 GNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD-------------------- 468 (639)
Q Consensus 409 GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~-------------------- 468 (639)
||||+..... + ..+.+.+. +. .-.+.++.+..++++|++++...+
T Consensus 69 GNHD~~~~~~---~----------~~~~~~~~-~~-~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~ 133 (239)
T TIGR03729 69 GNHDMLKDLT---Y----------EEIESNDS-PL-YLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFW 133 (239)
T ss_pred CCCCCCCCCC---H----------HHHHhccc-hh-hhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEE
Confidence 9999731110 0 00111110 00 001223333346677777773111
Q ss_pred ------C-----CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-------CCCchh-HHHHHHHHHHHHhCCC
Q 006591 469 ------W-----WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-------GFLSVD-KFFVKSVEPLLLKNKV 529 (639)
Q Consensus 469 ------~-----~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-------~~~~~~-~~~r~~l~~Ll~~y~V 529 (639)
+ ....+|++||++.|++... ..+|+++|+|+..... .+.... ....+.|.+++++++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~---~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v 210 (239)
T TIGR03729 134 FDRRIKRPMSDPERTAIVLKQLKKQLNQLDN---KQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEI 210 (239)
T ss_pred eecccCCCCChHHHHHHHHHHHHHHHHhcCC---CCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCC
Confidence 1 1236789999999987532 2389999999854210 111111 1113788999999999
Q ss_pred eEEEeCcccccc
Q 006591 530 DLVLFGHVHNYE 541 (639)
Q Consensus 530 dlvlsGH~H~Ye 541 (639)
+++|+||.|.-.
T Consensus 211 ~~~i~GH~H~~~ 222 (239)
T TIGR03729 211 KDVIFGHLHRRF 222 (239)
T ss_pred CEEEECCccCCC
Confidence 999999999864
No 24
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.47 E-value=3.8e-13 Score=125.79 Aligned_cols=127 Identities=22% Similarity=0.243 Sum_probs=91.3
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcC-CceEEec
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASR-VSYMTAI 408 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~-vP~~~v~ 408 (639)
|+.++|.|.+........ .....++++.+.+.+.++|+|+++||+++. +...+|+.+.+.++.+... .|++.++
T Consensus 1 il~isD~Hl~~~~~~~~~----~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v~ 75 (144)
T cd07400 1 ILHLSDLHFGPERKPELL----ALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVVP 75 (144)
T ss_pred CeEeCccCCCCCcchhHH----HHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEeC
Confidence 578999998764321110 111224567777778899999999999975 5566777777777776533 5999999
Q ss_pred CCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 006591 409 GNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDR 488 (639)
Q Consensus 409 GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r 488 (639)
||||.
T Consensus 76 GNHD~--------------------------------------------------------------------------- 80 (144)
T cd07400 76 GNHDV--------------------------------------------------------------------------- 80 (144)
T ss_pred CCCeE---------------------------------------------------------------------------
Confidence 99992
Q ss_pred CCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 489 SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 489 ~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
|+++|+|++......... ...++.+.+++++++++++++||+|.....
T Consensus 81 ------iv~~Hhp~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 ------IVVLHHPLVPPPGSGRER-LLDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred ------EEEecCCCCCCCcccccc-CCCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 888999997654311110 013677999999999999999999997643
No 25
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.45 E-value=8.3e-13 Score=132.51 Aligned_cols=204 Identities=15% Similarity=0.172 Sum_probs=120.7
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
++||++++|+|..... ....++++++.+.+.+||+|+++||+++...... +.+.+.++.+....|++.
T Consensus 1 ~~~i~~~sDlH~~~~~----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 1 GLRIAHLSDLHLGPFV----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CCEEEEEeecCCCccC----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 4799999999986431 1345677888888889999999999997654322 345566666656789999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
++||||+....... + ....+...+.. -.+....++.++..+.++.-... ....+++.+.+++.
T Consensus 69 v~GNHD~~~~~~~~-~----------~~~l~~~~v~~--L~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~ 131 (223)
T cd07385 69 VLGNHDYYSGDEEN-W----------IEALESAGITV--LRNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL 131 (223)
T ss_pred ECCCcccccCchHH-H----------HHHHHHcCCEE--eecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC
Confidence 99999985321100 0 00000001100 01234556666655544431111 12234667777654
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCe--ecCCCccCCCCCcc
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNK--CMGIPTKDDNGIDT 564 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~--~~~~~~~d~~G~~~ 564 (639)
+ +..+.|++.|.|.+.. . +.+.++|++++||+|..|...|..... |.... +-..|.
T Consensus 132 ~--~~~~~I~l~H~P~~~~-------------~----~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~-~~~~G~-- 189 (223)
T cd07385 132 D--EDDPNILLAHQPDTAE-------------E----AAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLAR-PYDYGL-- 189 (223)
T ss_pred C--CCCCEEEEecCCChhH-------------H----hcccCccEEEeccCCCCEEeccccccccchhhcC-cccceE--
Confidence 3 3456899999985311 1 256789999999999999776654321 11111 122343
Q ss_pred ccCCCCCCcEEEEeCCCCC
Q 006591 565 YDHSNYTAPVHAIIGMAGF 583 (639)
Q Consensus 565 y~~~~~~gpv~iv~G~aG~ 583 (639)
|. ..+..+||..|.|..
T Consensus 190 ~~--~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 190 YR--KGGSQLYVSRGLGTW 206 (223)
T ss_pred EE--ECCEEEEEcCCccCC
Confidence 22 124577887777754
No 26
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.44 E-value=6.7e-12 Score=126.03 Aligned_cols=178 Identities=13% Similarity=0.101 Sum_probs=110.1
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
...|+++++|+|.. ...++++.+.+++.++|+|+++||+++......+...+++.+..+ ..|++
T Consensus 3 ~~~kIl~iSDiHgn--------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 3 TVRYVLATSNPKGD--------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred ceeEEEEEEecCCC--------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 35799999999943 456777877776778999999999997542344455566655443 57999
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCC-CCCCCeEEEEe-CCEEEEEEeCCCCC--CCCHHHH----H
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTP-SKDRPWYSIEQ-ASVHFTVISTEHDW--WLNSEQY----K 477 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~-~~~~~~Ysfd~-G~v~fi~LDT~~~~--~~g~~Q~----~ 477 (639)
+++||||..... + ....|......|.. .-... ...+ |+++|+.++..... ...++|. .
T Consensus 67 ~V~GNhD~~v~~----~--------l~~~~~~~~~~p~~~~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~ 132 (224)
T cd07388 67 YVPGPQDAPLWE----Y--------LREAYNAELVHPEIRNVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 132 (224)
T ss_pred EEcCCCChHHHH----H--------HHHHhcccccCccceecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhh
Confidence 999999963000 0 00011100001110 00111 2344 66999999865432 2345552 5
Q ss_pred HHHH-HHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccc
Q 006591 478 WIQK-DLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVH 538 (639)
Q Consensus 478 WL~~-~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H 538 (639)
||.+ .|+...+...+..|+++|+|++..+... ...+.+..++++++..+++|||.|
T Consensus 133 ~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 133 WVAEYRLKALWELKDYRKVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hHHHHHHHHHHhCCCCCeEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 6433 2222212233458999999999874211 124678889999999999999999
No 27
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.43 E-value=3.5e-12 Score=137.09 Aligned_cols=93 Identities=19% Similarity=0.271 Sum_probs=66.4
Q ss_pred CCeEEEE-eCCE--EEEEEeCCCC-----------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-CC---
Q 006591 448 RPWYSIE-QASV--HFTVISTEHD-----------WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-GF--- 509 (639)
Q Consensus 448 ~~~Ysfd-~G~v--~fi~LDT~~~-----------~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-~~--- 509 (639)
..||+|+ .|++ |||+||+... ...+.+|++||+++|+.+.. +.+++|++.|+|+.+... ..
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 3599999 5845 9999998641 12579999999999998642 457788888888875221 10
Q ss_pred C---------chhHHHHHHHHHHHHhC-CCeEEEeCcccccc
Q 006591 510 L---------SVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYE 541 (639)
Q Consensus 510 ~---------~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~Ye 541 (639)
. ..+.....+|..+|++| +|.++|+||.|...
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~ 412 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNT 412 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccccc
Confidence 0 00111124799999999 79999999999643
No 28
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.37 E-value=3.2e-12 Score=127.83 Aligned_cols=198 Identities=12% Similarity=0.062 Sum_probs=114.4
Q ss_pred EEEEEecCCCCCCCCCCccc-cCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCC-cHHHHHHHHHhhhhhh-cCCceE
Q 006591 329 KFLAYGDMGKAPRDASTEHY-IQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG-FLVEWDFFLHQITPVA-SRVSYM 405 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~-~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g-~~~~wd~f~~~l~~l~-~~vP~~ 405 (639)
||++++|+|.+......... ........++++.+.+.+.++|+|+++||+++... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 68999999988543211100 01123567888888888889999999999997643 2344566667776654 478999
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCC--CCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPM--PTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDL 483 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~--P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~L 483 (639)
+++||||....... +.. ...+...... ...........++.+++.|+.++..... ....+.++++..+
T Consensus 81 ~~~GNHD~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~ 150 (223)
T cd00840 81 IIAGNHDSPSRLGA--LSP-------LLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRP 150 (223)
T ss_pred EecCCCCCcccccc--ccc-------hHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHh
Confidence 99999998532110 000 0000000000 0000011122334456788888753221 1233444445555
Q ss_pred hhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 484 ASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 484 a~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
... .+....|++.|.|+.......... .......+...++|++++||.|..+.
T Consensus 151 ~~~--~~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 151 RPL--DPDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred hcc--CCCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCee
Confidence 543 344568999999986544211100 12334456678999999999999764
No 29
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.37 E-value=8e-13 Score=105.70 Aligned_cols=61 Identities=36% Similarity=0.626 Sum_probs=41.5
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEE-eCCEEEEEEEECCCCeEEEEE
Q 006591 571 TAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHA-TKQEIQLEFVNADTRKVEDSF 631 (639)
Q Consensus 571 ~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v-~~~~L~~e~~~~~dG~v~D~f 631 (639)
++|||||+|+||+.++.+..++|+|+++|..+|||.+|++ |.++|++||+++.+|+|+|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCcccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 3799999999999888888888999999999999999996 899999999999999999998
No 30
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.36 E-value=1.4e-11 Score=127.82 Aligned_cols=172 Identities=14% Similarity=0.116 Sum_probs=102.9
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+++|+++++|+|.+... ....++++++.+++.+||+|+++||+++.. ....++.+.+.++.+.+..|++
T Consensus 48 ~~~rI~~lSDlH~~~~~----------~~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv~ 116 (271)
T PRK11340 48 APFKILFLADLHYSRFV----------PLSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPTF 116 (271)
T ss_pred CCcEEEEEcccCCCCcC----------CHHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCEE
Confidence 57999999999975321 134567777777788999999999999632 2223456667777776678999
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCC-CCCCCCeEEEEeCC--EEEEEEeCCCCCCCCHHHHHHHHHH
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPT-PSKDRPWYSIEQAS--VHFTVISTEHDWWLNSEQYKWIQKD 482 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~-~~~~~~~Ysfd~G~--v~fi~LDT~~~~~~g~~Q~~WL~~~ 482 (639)
+++||||+...... ...+.+.+..-. .--.+....+..++ +.++.++.... +... ..+.
T Consensus 117 ~V~GNHD~~~~~~~------------~~~~~~~l~~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~ 178 (271)
T PRK11340 117 ACFGNHDRPVGTEK------------NHLIGETLKSAGITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPA 178 (271)
T ss_pred EecCCCCcccCccc------------hHHHHHHHHhcCcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHh
Confidence 99999997421100 001111110000 00013344555543 55666653211 1111 1122
Q ss_pred HhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccC
Q 006591 483 LASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFR 548 (639)
Q Consensus 483 La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~ 548 (639)
++ + ....|++.|.|-+- +.+.+.++||+||||+|.-|-..|..+
T Consensus 179 ~~----~-~~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~~~ 222 (271)
T PRK11340 179 SE----A-NLPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPLVG 222 (271)
T ss_pred cC----C-CCCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccccC
Confidence 22 1 23589999999531 123467899999999999997767543
No 31
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.31 E-value=9e-12 Score=119.51 Aligned_cols=146 Identities=18% Similarity=0.144 Sum_probs=88.6
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecC
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIG 409 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~G 409 (639)
|+++||+|.+.... .. .+.+.+...++|+|+++||+++... ..++.. .........|++.++|
T Consensus 1 ~~~iSDlH~~~~~~----------~~---~~~~~~~~~~~d~li~~GDi~~~~~-~~~~~~---~~~~~~~~~~v~~v~G 63 (166)
T cd07404 1 IQYLSDLHLEFEDN----------LA---DLLNFPIAPDADILVLAGDIGYLTD-APRFAP---LLLALKGFEPVIYVPG 63 (166)
T ss_pred CceEccccccCccc----------cc---cccccCCCCCCCEEEECCCCCCCcc-hHHHHH---HHHhhcCCccEEEeCC
Confidence 57899999764211 00 1113335578999999999996532 233322 2223345789999999
Q ss_pred CCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCC-CCHHHHHHHHHHHhhccC
Q 006591 410 NHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWW-LNSEQYKWIQKDLASVDR 488 (639)
Q Consensus 410 NHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~-~g~~Q~~WL~~~La~~~r 488 (639)
|||+. +.|+...-..++. .++++.+|+.++++
T Consensus 64 NHD~~-------------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~---- 96 (166)
T cd07404 64 NHEFY-------------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR---- 96 (166)
T ss_pred CcceE-------------------------------------------EEEEeeecccccCccchHHHHhCCCCCC----
Confidence 99972 1222221111111 12345555555554
Q ss_pred CCCCeEEEEeccCCccCCC-C---CCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 489 SKTPWLIFAGHRPMYSSLD-G---FLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 489 ~~~pwvIV~~H~P~y~~~~-~---~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
+.+||++|+|+..... . ....+...++.+..++++++|+++++||+|....
T Consensus 97 ---~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 97 ---GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred ---CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 2489999999976543 1 1112234566788888899999999999998743
No 32
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.18 E-value=5.6e-10 Score=105.09 Aligned_cols=123 Identities=22% Similarity=0.282 Sum_probs=75.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+||+++||+|.. ...++++++.+ .++|+|+++||+++. .++.+.++.+ |++.+
T Consensus 1 Mki~~~sD~H~~--------------~~~~~~~~~~~--~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v 53 (156)
T PF12850_consen 1 MKIAVISDLHGN--------------LDALEAVLEYI--NEPDFVIILGDIFDP-------EEVLELLRDI----PVYVV 53 (156)
T ss_dssp EEEEEEE--TTT--------------HHHHHHHHHHH--TTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE
T ss_pred CEEEEEeCCCCC--------------hhHHHHHHHHh--cCCCEEEECCCchhH-------HHHHHHHhcC----CEEEE
Confidence 699999999974 23466777777 469999999999852 4555555554 89999
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh-c
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLAS-V 486 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~-~ 486 (639)
.||||... +...... . . +.. .
T Consensus 54 ~GNHD~~~-------------------~~~~~~~------~-~--------------------------------~~~~~ 75 (156)
T PF12850_consen 54 RGNHDNWA-------------------FPNENDE------E-Y--------------------------------LLDAL 75 (156)
T ss_dssp --CCHSTH-------------------HHSEECT------C-S--------------------------------SHSEE
T ss_pred eCCccccc-------------------chhhhhc------c-c--------------------------------cccce
Confidence 99999631 1110000 0 0 111 0
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
...-....|++.|...+.... ..+.+..++...+++++++||.|.....
T Consensus 76 ~~~~~~~~i~~~H~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~ 124 (156)
T PF12850_consen 76 RLTIDGFKILLSHGHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVF 124 (156)
T ss_dssp EEEETTEEEEEESSTSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEE
T ss_pred eeeecCCeEEEECCCCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEE
Confidence 001124578888887765331 1335667788999999999999997764
No 33
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.17 E-value=3.9e-09 Score=108.73 Aligned_cols=89 Identities=16% Similarity=0.280 Sum_probs=59.8
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcC------hHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhh-
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPG------SLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPV- 398 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg------~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l- 398 (639)
.+||++.++|+|.+..-.+.-...-|. ..++..-|.+.++.++||||+++||+++.......-..++..++|.
T Consensus 52 g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I 131 (379)
T KOG1432|consen 52 GTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAI 131 (379)
T ss_pred CceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHHHHHHHhhhHh
Confidence 579999999999886522110001111 2445555555667799999999999998743332223455666664
Q ss_pred hcCCceEEecCCCCcC
Q 006591 399 ASRVSYMTAIGNHERD 414 (639)
Q Consensus 399 ~~~vP~~~v~GNHD~~ 414 (639)
..++||.+++||||-.
T Consensus 132 ~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 132 DRKIPWAAVLGNHDDE 147 (379)
T ss_pred hcCCCeEEEecccccc
Confidence 4799999999999964
No 34
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.10 E-value=6.1e-10 Score=100.24 Aligned_cols=119 Identities=24% Similarity=0.217 Sum_probs=82.2
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecCC
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGN 410 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GN 410 (639)
+++||+|...... ..... .....+.++|+|+++||+++...... +..+...........|++.++||
T Consensus 1 ~~~gD~h~~~~~~-----------~~~~~-~~~~~~~~~~~vi~~GD~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~GN 67 (131)
T cd00838 1 AVISDIHGNLEAL-----------EAVLE-AALAAAEKPDFVLVLGDLVGDGPDPE-EVLAAALALLLLLGIPVYVVPGN 67 (131)
T ss_pred CeeecccCCccch-----------HHHHH-HHHhcccCCCEEEECCcccCCCCCch-HHHHHHHHHhhcCCCCEEEeCCC
Confidence 4689999764311 11110 23445689999999999998655433 33333233334468999999999
Q ss_pred CCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCC
Q 006591 411 HERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSK 490 (639)
Q Consensus 411 HD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~ 490 (639)
||
T Consensus 68 HD------------------------------------------------------------------------------ 69 (131)
T cd00838 68 HD------------------------------------------------------------------------------ 69 (131)
T ss_pred ce------------------------------------------------------------------------------
Confidence 99
Q ss_pred CCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceee
Q 006591 491 TPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTC 544 (639)
Q Consensus 491 ~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~ 544 (639)
|++.|.|++.............++.+..++.+++++++|+||.|.+.+..
T Consensus 70 ----i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 ----ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred ----EEEeccCCCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 88899999766542221112246788899999999999999999999864
No 35
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.00 E-value=3.9e-09 Score=99.93 Aligned_cols=59 Identities=19% Similarity=0.323 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
|++++||+|.. ...++++++.+++ +|.|+++||+++...... +....|++.+.
T Consensus 1 ~i~~isD~H~~--------------~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V~ 53 (155)
T cd00841 1 KIGVISDTHGS--------------LELLEKALELFGD--VDLIIHAGDVLYPGPLNE-----------LELKAPVIAVR 53 (155)
T ss_pred CEEEEecCCCC--------------HHHHHHHHHHhcC--CCEEEECCccccccccch-----------hhcCCcEEEEe
Confidence 58999999953 2455666666543 999999999996543211 23467899999
Q ss_pred CCCCcC
Q 006591 409 GNHERD 414 (639)
Q Consensus 409 GNHD~~ 414 (639)
||||..
T Consensus 54 GNhD~~ 59 (155)
T cd00841 54 GNCDGE 59 (155)
T ss_pred CCCCCc
Confidence 999973
No 36
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.96 E-value=9.7e-08 Score=92.97 Aligned_cols=171 Identities=13% Similarity=0.116 Sum_probs=99.5
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
+++++||+|..... ....+.+.+.+++.++|.|+|+||+++ ....+.++.+ ..|++.|.
T Consensus 1 ~i~viSDtHl~~~~-----------~~~~~~~~~~~~~~~~d~iih~GDi~~--------~~~~~~l~~~--~~~~~~V~ 59 (178)
T cd07394 1 LVLVIGDLHIPHRA-----------SDLPAKFKKLLVPGKIQHVLCTGNLCS--------KETYDYLKTI--APDVHIVR 59 (178)
T ss_pred CEEEEEecCCCCCc-----------hhhHHHHHHHhccCCCCEEEECCCCCC--------HHHHHHHHhh--CCceEEEE
Confidence 47899999965421 122334444454468999999999985 1222333333 24789999
Q ss_pred CCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 006591 409 GNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDR 488 (639)
Q Consensus 409 GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r 488 (639)
||||... .+|. ...+++++.+
T Consensus 60 GN~D~~~------------------------~lp~------~~~~~~~g~~----------------------------- 80 (178)
T cd07394 60 GDFDENL------------------------NYPE------TKVITVGQFK----------------------------- 80 (178)
T ss_pred CCCCccc------------------------cCCC------cEEEEECCEE-----------------------------
Confidence 9999631 1221 1234444444
Q ss_pred CCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCC
Q 006591 489 SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHS 568 (639)
Q Consensus 489 ~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~ 568 (639)
|.+.|.-.+... .. .+.+..+.++.++|++++||+|......
T Consensus 81 ------i~l~HG~~~~~~---~~-----~~~~~~~~~~~~~dvii~GHTH~p~~~~------------------------ 122 (178)
T cd07394 81 ------IGLIHGHQVVPW---GD-----PDSLAALQRQLDVDILISGHTHKFEAFE------------------------ 122 (178)
T ss_pred ------EEEEECCcCCCC---CC-----HHHHHHHHHhcCCCEEEECCCCcceEEE------------------------
Confidence 444443222111 00 2234555667889999999999754321
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCeE
Q 006591 569 NYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKV 627 (639)
Q Consensus 569 ~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v 627 (639)
.++.+.+..|+.|.+.... . ......|+.++++++.+.++.++..++++
T Consensus 123 -~~g~~viNPGSv~~~~~~~-----~----~~~~~syail~~~~~~~~~~~~~l~~~~~ 171 (178)
T cd07394 123 -HEGKFFINPGSATGAFSPL-----D----PNVIPSFVLMDIQGSKVVTYVYQLIDGEV 171 (178)
T ss_pred -ECCEEEEECCCCCCCCCCC-----C----CCCCCeEEEEEecCCeEEEEEEEEECCcE
Confidence 1234667778877532210 0 01123699999988889999988655543
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.95 E-value=6.4e-09 Score=96.34 Aligned_cols=117 Identities=23% Similarity=0.325 Sum_probs=76.4
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
||+++||+|.... .+...++|+|+++||+++. +...+++.+.+.++.+. ..+++.++
T Consensus 1 ~i~~isD~H~~~~---------------------~~~~~~~D~vi~~GD~~~~-~~~~~~~~~~~~l~~~~-~~~~~~v~ 57 (135)
T cd07379 1 RFVCISDTHSRHR---------------------TISIPDGDVLIHAGDLTER-GTLEELQKFLDWLKSLP-HPHKIVIA 57 (135)
T ss_pred CEEEEeCCCCCCC---------------------cCcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhCC-CCeEEEEE
Confidence 5899999995421 1233679999999999954 44455556666665542 22357899
Q ss_pred CCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 006591 409 GNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDR 488 (639)
Q Consensus 409 GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r 488 (639)
||||... . +
T Consensus 58 GNHD~~~--------------------------------~----------------------------------~----- 66 (135)
T cd07379 58 GNHDLTL--------------------------------D----------------------------------P----- 66 (135)
T ss_pred CCCCCcC--------------------------------C----------------------------------C-----
Confidence 9999620 0 1
Q ss_pred CCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 489 SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 489 ~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
..+.|++.|.|++..............+.+..++++++++++++||+|...
T Consensus 67 --~~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 --EDTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred --CCCEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 123688899999765431111001113556777788899999999999864
No 38
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.92 E-value=4.8e-09 Score=107.05 Aligned_cols=180 Identities=16% Similarity=0.154 Sum_probs=95.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC-C---cHHHHHHHHHhhhhhhcC-C
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT-G---FLVEWDFFLHQITPVASR-V 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~-g---~~~~wd~f~~~l~~l~~~-v 402 (639)
+++++++|+|.+... +.....+.+.++. ...++|+|+++||+++.- + .....+...+.++.+... +
T Consensus 1 M~i~~iSDlHl~~~~--------~~~~~~~~~~l~~-~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~ 71 (241)
T PRK05340 1 MPTLFISDLHLSPER--------PAITAAFLRFLRG-EARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGV 71 (241)
T ss_pred CcEEEEeecCCCCCC--------hhHHHHHHHHHHh-hhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCC
Confidence 479999999986432 1111222222222 236899999999999631 1 112234455566666543 8
Q ss_pred ceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHH
Q 006591 403 SYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKD 482 (639)
Q Consensus 403 P~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~ 482 (639)
|++.+.||||+... ..+.+..++..- .....++.++.++++...... ......++++++.
T Consensus 72 ~v~~v~GNHD~~~~----------------~~~~~~~g~~~l---~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~ 131 (241)
T PRK05340 72 PCYFMHGNRDFLLG----------------KRFAKAAGMTLL---PDPSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRK 131 (241)
T ss_pred eEEEEeCCCchhhh----------------HHHHHhCCCEEe---CCcEEEEECCEEEEEECCccc-ccCCHHHHHHHHH
Confidence 99999999997311 011111111000 112356777877777654322 1233455555555
Q ss_pred HhhccCCCCCeEEEEeccCCccCCC--------------C--CCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 483 LASVDRSKTPWLIFAGHRPMYSSLD--------------G--FLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 483 La~~~r~~~pwvIV~~H~P~y~~~~--------------~--~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
+.. ||...++|.+++.... . .........+.+.+++++++++++++||+|....
T Consensus 132 ~r~------~~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 132 VRN------PWLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HhC------HHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 542 1233333333332110 0 0000001135577888999999999999998654
No 39
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.92 E-value=5e-09 Score=102.53 Aligned_cols=109 Identities=17% Similarity=0.226 Sum_probs=71.9
Q ss_pred HhhcCCCcEEEEcCCccccCCc--HHHHHHHHHhhhhhh---cCCceEEecCCCCcCCCCCCCccCCCCCCCcccccccc
Q 006591 363 EVNNGNVDSVFHIGDISYATGF--LVEWDFFLHQITPVA---SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYET 437 (639)
Q Consensus 363 ~i~~~~pDfVl~~GDl~y~~g~--~~~wd~f~~~l~~l~---~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~ 437 (639)
.++..+||+|+++||+++.+.. ..+|.+.++.+.+++ ..+|++.++||||.+..+. +...+.-..|++
T Consensus 37 a~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~-------~~~~~~v~RF~~ 109 (195)
T cd08166 37 ALNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE-------DPIESKIRRFEK 109 (195)
T ss_pred HHhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC-------CcCHHHHHHHHH
Confidence 3455799999999999987543 234554444444443 4689999999999852110 000001112222
Q ss_pred ccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHH
Q 006591 438 YFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFV 517 (639)
Q Consensus 438 ~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r 517 (639)
+| |++.|.|+.....
T Consensus 110 ~F-------------------------------------------------------i~lsH~P~~~~~~---------- 124 (195)
T cd08166 110 YF-------------------------------------------------------IMLSHVPLLAEGG---------- 124 (195)
T ss_pred hh-------------------------------------------------------eeeeccccccccc----------
Confidence 22 8899999866542
Q ss_pred HHHHHHHHhCCCeEEEeCccccccee
Q 006591 518 KSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 518 ~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
..+..++.+++++++|+||.|.+...
T Consensus 125 ~~~~~~~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 125 QALKHVVTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred HHHHHHHHhcCceEEEEcCccceeeE
Confidence 25677888999999999999997764
No 40
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.91 E-value=4.1e-08 Score=99.17 Aligned_cols=176 Identities=16% Similarity=0.158 Sum_probs=91.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+|++++||+|.... . ...+.+++.+||+|+++||+++.. .++.+.+..+ ..|++.+
T Consensus 1 ~rIa~isDiHg~~~-------------~---~~~~~l~~~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V 56 (238)
T cd07397 1 LRIAIVGDVHGQWD-------------L---EDIKALHLLQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVI 56 (238)
T ss_pred CEEEEEecCCCCch-------------H---HHHHHHhccCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEE
Confidence 58999999995421 0 112234556899999999998431 1233333332 4789999
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeE---EEEeCCEEEEEEeCCCC------C---------
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWY---SIEQASVHFTVISTEHD------W--------- 469 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Y---sfd~G~v~fi~LDT~~~------~--------- 469 (639)
+||||..+.... .+ . ...+.+....-. .... ..++....+.++-++.. |
T Consensus 57 ~GNHD~~~~~~~-~~-----k---~~~l~~~L~~lg----~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~ 123 (238)
T cd07397 57 LGNHDAWYDATF-RK-----K---GDRVQEQLELLG----DLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAV 123 (238)
T ss_pred cCCCcccccccc-cc-----h---HHHHHHHHHHhC----CcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHH
Confidence 999998542210 00 0 001111111000 0111 11122222333333210 0
Q ss_pred ---CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-------------CCCchhHHHHHHHHHHHHhCCCeEEE
Q 006591 470 ---WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-------------GFLSVDKFFVKSVEPLLLKNKVDLVL 533 (639)
Q Consensus 470 ---~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-------------~~~~~~~~~r~~l~~Ll~~y~Vdlvl 533 (639)
..-.+-++.+.+.++.++..+ -.|++.|.++...++ +....++.+++++..+-..-.+++++
T Consensus 124 fgi~s~~eA~~~ive~~~~~~~~~--~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~ 201 (238)
T cd07397 124 YGVISLEESAQRIIAAAKKAPPDL--PLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVV 201 (238)
T ss_pred hCCCCHHHHHHHHHHHhhhcCCCC--CeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEE
Confidence 011233444444444332222 278889999976542 11224567777776655445689999
Q ss_pred eCcccccce
Q 006591 534 FGHVHNYER 542 (639)
Q Consensus 534 sGH~H~YeR 542 (639)
+||.|.--|
T Consensus 202 fGH~H~~l~ 210 (238)
T cd07397 202 FGHMHHRLR 210 (238)
T ss_pred eCCccCccc
Confidence 999998644
No 41
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.91 E-value=4.6e-09 Score=101.59 Aligned_cols=59 Identities=17% Similarity=0.345 Sum_probs=41.3
Q ss_pred HHHHHHHHhhcCCCcEEEEcCCccccCCc--HHHHHHHHHhhhhhh-------cCCceEEecCCCCcC
Q 006591 356 VVKAMSDEVNNGNVDSVFHIGDISYATGF--LVEWDFFLHQITPVA-------SRVSYMTAIGNHERD 414 (639)
Q Consensus 356 ~~~~l~~~i~~~~pDfVl~~GDl~y~~g~--~~~wd~f~~~l~~l~-------~~vP~~~v~GNHD~~ 414 (639)
..+.+...+.+.+||+|+++||+++.... ..+|.+..+.+..+. ..+|++.++||||+.
T Consensus 33 ~~~~~~~~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 33 MRRAFKTALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHHHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 34444555567899999999999976432 245665555454443 268999999999985
No 42
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.90 E-value=1.1e-08 Score=106.35 Aligned_cols=77 Identities=14% Similarity=0.148 Sum_probs=56.8
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
.+++++.++|+|..... ....+.+..+.+..+|+|+.+||+++. .....++...+.++++.+..+++
T Consensus 43 ~~~~iv~lSDlH~~~~~------------~~~~~~~~~i~~~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~ 109 (284)
T COG1408 43 QGLKIVQLSDLHSLPFR------------EEKLALLIAIANELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVF 109 (284)
T ss_pred CCeEEEEeehhhhchhh------------HHHHHHHHHHHhcCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEE
Confidence 57899999999976431 223344444556677999999999974 12234566777788888899999
Q ss_pred EecCCCCcCC
Q 006591 406 TAIGNHERDY 415 (639)
Q Consensus 406 ~v~GNHD~~~ 415 (639)
+++||||+..
T Consensus 110 av~GNHd~~~ 119 (284)
T COG1408 110 AVLGNHDYGV 119 (284)
T ss_pred EEeccccccc
Confidence 9999999853
No 43
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.87 E-value=9.7e-09 Score=100.72 Aligned_cols=178 Identities=16% Similarity=0.192 Sum_probs=96.9
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHH------------------
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWD------------------ 389 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd------------------ 389 (639)
-++++++|.+. ..+.++++.+.+....+|+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g--------------~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~ 71 (255)
T PF14582_consen 6 RKILAISNFRG--------------DFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEE 71 (255)
T ss_dssp -EEEEEE--TT---------------HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHH
T ss_pred hhheeecCcch--------------HHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhh
Confidence 37889999873 3567888888888789999999999987766666777
Q ss_pred --------HHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEE
Q 006591 390 --------FFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFT 461 (639)
Q Consensus 390 --------~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi 461 (639)
.|++.+..+ .+|++++|||||-... .| ...+|....-.|.--.-...+.+--|...|+
T Consensus 72 ~~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~~----~~--------lr~a~~~e~v~p~~~~vH~sf~~~~g~y~v~ 137 (255)
T PF14582_consen 72 CYDSEALDKFFRILGEL--GVPVFVVPGNMDAPER----FF--------LREAYNAEIVTPHIHNVHESFFFWKGEYLVA 137 (255)
T ss_dssp HHHHHHHHHHHHHHHCC---SEEEEE--TTS-SHH----HH--------HHHHHHCCCC-TTEEE-CTCEEEETTTEEEE
T ss_pred hhhHHHHHHHHHHHHhc--CCcEEEecCCCCchHH----HH--------HHHHhccceeccceeeeeeeecccCCcEEEE
Confidence 677766654 8999999999996200 00 0012221111111000001222333457777
Q ss_pred EEeCCC---C----CC--CCHHHHHHHHHHHhhccCCCCCeEEEEeccCC-ccCCCCCCchhHHHHHHHHHHHHhCCCeE
Q 006591 462 VISTEH---D----WW--LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPM-YSSLDGFLSVDKFFVKSVEPLLLKNKVDL 531 (639)
Q Consensus 462 ~LDT~~---~----~~--~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~-y~~~~~~~~~~~~~r~~l~~Ll~~y~Vdl 531 (639)
.+..+- . +. ....-.+|..+.|..++ ..-+|+++|.|+ +..+....+ .+.+..++++|+.++
T Consensus 138 G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~~~P~i 209 (255)
T PF14582_consen 138 GMGGEITDDQREEEFKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKTYNPDI 209 (255)
T ss_dssp EE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHHH--SE
T ss_pred ecCccccCCCccccccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCccccc-----HHHHHHHHHhcCCcE
Confidence 776531 0 10 11224456666666642 334788899999 444422222 357788999999999
Q ss_pred EEeCcccccc
Q 006591 532 VLFGHVHNYE 541 (639)
Q Consensus 532 vlsGH~H~Ye 541 (639)
+|+||.|--.
T Consensus 210 vl~Ghihe~~ 219 (255)
T PF14582_consen 210 VLCGHIHESH 219 (255)
T ss_dssp EEE-SSS-EE
T ss_pred EEecccccch
Confidence 9999999744
No 44
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.85 E-value=2.6e-07 Score=91.10 Aligned_cols=176 Identities=19% Similarity=0.195 Sum_probs=104.3
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC-CcHHHHHHHHHhhhhhh-cCCce
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT-GFLVEWDFFLHQITPVA-SRVSY 404 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~-g~~~~wd~f~~~l~~l~-~~vP~ 404 (639)
.+|+++++|.|.. ...++++.+.+...++|+++.+||++|.. +...+-.+-.. ++.+. ..+|+
T Consensus 3 ~mkil~vtDlHg~--------------~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~-~e~l~~~~~~v 67 (226)
T COG2129 3 KMKILAVTDLHGS--------------EDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNK-LEALKELGIPV 67 (226)
T ss_pred cceEEEEeccccc--------------hHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhH-HHHHHhcCCeE
Confidence 5899999999954 34567777777677999999999999332 21111111100 33333 58999
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC--C----CCCCHHH-HH
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH--D----WWLNSEQ-YK 477 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~--~----~~~g~~Q-~~ 477 (639)
++++||-|-..-. . .... ....-. --..+.|++.|+.+--.. . +...+++ +.
T Consensus 68 ~avpGNcD~~~v~--------------~-~l~~-~~~~v~-----~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s 126 (226)
T COG2129 68 LAVPGNCDPPEVI--------------D-VLKN-AGVNVH-----GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYS 126 (226)
T ss_pred EEEcCCCChHHHH--------------H-HHHh-cccccc-----cceEEecCcEEEEecccCCCCCCCccccCHHHHHH
Confidence 9999998852100 0 0000 111100 035677888887753221 1 1122332 34
Q ss_pred HHHHHHhhccCCCCCeEEEEeccCCccCCCCCCch-hHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 478 WIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSV-DKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 478 WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~-~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
-|++-++.++. +-.|+++|.|+|.....-+.. ..-....+.+++++.++.+.++||.|-+.
T Consensus 127 ~l~~~v~~~~~---~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~ 188 (226)
T COG2129 127 KLKSLVKKADN---PVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESR 188 (226)
T ss_pred HHHHHHhcccC---cceEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeecccc
Confidence 44444554321 113999999999866421111 22335788899999999999999999743
No 45
>PRK09453 phosphodiesterase; Provisional
Probab=98.81 E-value=3.3e-07 Score=89.38 Aligned_cols=71 Identities=15% Similarity=0.184 Sum_probs=48.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH---H--HHHHHHHhhhhhhcCC
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL---V--EWDFFLHQITPVASRV 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~---~--~wd~f~~~l~~l~~~v 402 (639)
+|++++||+|.. ...++++.+.+++.++|.|+++||+++..... . ..++..+.++.+ ..
T Consensus 1 mri~viSD~Hg~--------------~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 64 (182)
T PRK09453 1 MKLMFASDTHGS--------------LPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--AD 64 (182)
T ss_pred CeEEEEEeccCC--------------HHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CC
Confidence 589999999943 23466777777778899999999999643210 0 123344444432 35
Q ss_pred ceEEecCCCCcC
Q 006591 403 SYMTAIGNHERD 414 (639)
Q Consensus 403 P~~~v~GNHD~~ 414 (639)
+++.+.||||..
T Consensus 65 ~v~~V~GNhD~~ 76 (182)
T PRK09453 65 KIIAVRGNCDSE 76 (182)
T ss_pred ceEEEccCCcch
Confidence 899999999963
No 46
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.81 E-value=1.4e-07 Score=102.78 Aligned_cols=87 Identities=15% Similarity=0.142 Sum_probs=58.9
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH-HHHHHHHHhhhh-------
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-VEWDFFLHQITP------- 397 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~-~~wd~f~~~l~~------- 397 (639)
+.+||++++|+|.+..... ..........++++++.+.+.++|+||++||+.+..... .....+++.++.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~--~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p 79 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGEND--PVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKP 79 (405)
T ss_pred CceEEEEEcCCCCCCccCC--chhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCc
Confidence 5699999999998743211 111122456788899988889999999999999765321 222233343332
Q ss_pred --------------------h-------hcCCceEEecCCCCcC
Q 006591 398 --------------------V-------ASRVSYMTAIGNHERD 414 (639)
Q Consensus 398 --------------------l-------~~~vP~~~v~GNHD~~ 414 (639)
+ ...+|++++.||||..
T Consensus 80 ~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 80 CELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred cchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1378999999999973
No 47
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.80 E-value=1.2e-07 Score=90.18 Aligned_cols=62 Identities=27% Similarity=0.397 Sum_probs=41.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
+|++++||+|.... .++.+.+.++.. ++|.|+++||++. ....+.++.+ ..|++.
T Consensus 1 m~i~viSD~H~~~~--------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~ 56 (158)
T TIGR00040 1 MKILVISDTHGPLR--------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIA 56 (158)
T ss_pred CEEEEEecccCCcc--------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEE
Confidence 58999999995421 123344444444 8999999999982 1233333332 458999
Q ss_pred ecCCCCc
Q 006591 407 AIGNHER 413 (639)
Q Consensus 407 v~GNHD~ 413 (639)
+.||||.
T Consensus 57 V~GN~D~ 63 (158)
T TIGR00040 57 VRGNNDG 63 (158)
T ss_pred EccCCCc
Confidence 9999996
No 48
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.80 E-value=1.4e-08 Score=96.68 Aligned_cols=56 Identities=18% Similarity=0.308 Sum_probs=39.5
Q ss_pred HHHHHhhcCCCcEEEEcCCccccCC--cHHHHHHHHHhhhhhh---cCCceEEecCCCCcC
Q 006591 359 AMSDEVNNGNVDSVFHIGDISYATG--FLVEWDFFLHQITPVA---SRVSYMTAIGNHERD 414 (639)
Q Consensus 359 ~l~~~i~~~~pDfVl~~GDl~y~~g--~~~~wd~f~~~l~~l~---~~vP~~~v~GNHD~~ 414 (639)
.+.+.+++.+||+|+++||+++... ...+|..+...+..+. ...|++.++||||..
T Consensus 29 ~~~~~i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 29 SFQTSLWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 4445566789999999999997543 2345655555444443 258999999999974
No 49
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=98.77 E-value=4.3e-08 Score=98.93 Aligned_cols=166 Identities=17% Similarity=0.197 Sum_probs=97.1
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH---------------------HH
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL---------------------VE 387 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~---------------------~~ 387 (639)
||++.++.+..... ......+.....+.++|++||+||.+|++... .+
T Consensus 1 r~a~~SC~~~~~~~-----------~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (228)
T cd07389 1 RFAFGSCNKYESGY-----------FNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEE 69 (228)
T ss_pred CEEEEECCCCCCCC-----------cHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHH
Confidence 57888887755321 12222222112468999999999999998521 11
Q ss_pred HH----HHH--HhhhhhhcCCceEEecCCCCcCCCCCCCccC-CCCC-----CCccccccccccCCCCCC-----CCCCe
Q 006591 388 WD----FFL--HQITPVASRVSYMTAIGNHERDYVNSGSVYS-TPDS-----GGECGIPYETYFPMPTPS-----KDRPW 450 (639)
Q Consensus 388 wd----~f~--~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~-~~ds-----gge~~~~y~~~f~~P~~~-----~~~~~ 450 (639)
+. .+. ..++.+.+.+|++.++++||+..+..+..-. .... .......|..+++.+... ....|
T Consensus 70 ~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y 149 (228)
T cd07389 70 YRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIY 149 (228)
T ss_pred HHHHHHHHcCCHHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEE
Confidence 11 111 2345666889999999999996443221000 0000 001122455555544332 24579
Q ss_pred EEEEeCCE-EEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCC
Q 006591 451 YSIEQASV-HFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKV 529 (639)
Q Consensus 451 Ysfd~G~v-~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~V 529 (639)
++|.+|.. .|++||++... ..+.+ ....|++|..++.+.++
T Consensus 150 ~~~~~G~~~~~~~lD~R~~R-------------------------------------d~W~~-~~~er~~l~~~~~~~~~ 191 (228)
T cd07389 150 RSFRFGDLVDLILLDTRTYR-------------------------------------DSWDG-YPAERERLLDLLAKRKI 191 (228)
T ss_pred EEEecCCcceEEEEeccccc-------------------------------------ccccc-cHHHHHHHHHHHHHhCC
Confidence 99999996 99999998764 11111 13346777777655543
Q ss_pred --eEEEeCccccccee
Q 006591 530 --DLVLFGHVHNYERT 543 (639)
Q Consensus 530 --dlvlsGH~H~YeRt 543 (639)
-++|+|++|..+-.
T Consensus 192 ~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 192 KNVVFLSGDVHLAEAS 207 (228)
T ss_pred CCeEEEecHHHHHHHh
Confidence 38899999986543
No 50
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.67 E-value=1.8e-07 Score=88.28 Aligned_cols=184 Identities=19% Similarity=0.176 Sum_probs=97.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+++.+++|+|.+..-+..-....+++...-++|.+..+. ..=|.|+..|||+.+......-.. ++.+..+ ..+ -+
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea~~D-l~~i~~L-PG~-K~ 77 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEAEED-LRFIGDL-PGT-KY 77 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechhhhhh-hhhhhcC-CCc-EE
Confidence 467788888876443321122233333334455444322 345899999999988654322111 2333332 233 36
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeE---EEEeCCEEEEEEeC---C-CCCCCCHHH---
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWY---SIEQASVHFTVIST---E-HDWWLNSEQ--- 475 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Y---sfd~G~v~fi~LDT---~-~~~~~g~~Q--- 475 (639)
.+.||||+.|... +. ..+. +|. ..+| .|.+++..++..-. - .++..-.+|
T Consensus 78 m~rGNHDYWw~s~-sk-------------l~n~--lp~----~l~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Dek 137 (230)
T COG1768 78 MIRGNHDYWWSSI-SK-------------LNNA--LPP----ILFYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEK 137 (230)
T ss_pred EEecCCccccchH-HH-------------HHhh--cCc----hHhhhccceeEeeEEEEEeecccCCCCCcCccchhHHH
Confidence 7899999976421 11 1111 110 0111 34555544443321 1 112122233
Q ss_pred -----HHHHHH-HHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 476 -----YKWIQK-DLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 476 -----~~WL~~-~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
+.-|+. ..++. ++...-.||+.|.|+++.... ...+.+++++++|+.++.||.|.-.|-
T Consensus 138 i~~RE~~RLrlsa~a~l-~k~~~~fivM~HYPP~s~~~t--------~~~~sevlee~rv~~~lyGHlHgv~~p 202 (230)
T COG1768 138 IFLREIGRLRLSADAAL-PKGVSKFIVMTHYPPFSDDGT--------PGPFSEVLEEGRVSKCLYGHLHGVPRP 202 (230)
T ss_pred HHHHHHHHHHHHHHHhc-ccCcCeEEEEEecCCCCCCCC--------CcchHHHHhhcceeeEEeeeccCCCCC
Confidence 222333 22223 234455899999999877642 124567788999999999999998774
No 51
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.62 E-value=2e-07 Score=91.14 Aligned_cols=59 Identities=15% Similarity=0.202 Sum_probs=36.5
Q ss_pred HHHHHHHHhh-cCCCcEEEEcCCccccCCc--HHHHHHHHHhhhhhh--------------------cCCceEEecCCCC
Q 006591 356 VVKAMSDEVN-NGNVDSVFHIGDISYATGF--LVEWDFFLHQITPVA--------------------SRVSYMTAIGNHE 412 (639)
Q Consensus 356 ~~~~l~~~i~-~~~pDfVl~~GDl~y~~g~--~~~wd~f~~~l~~l~--------------------~~vP~~~v~GNHD 412 (639)
.++.+.+.+. ..+||.|+++||+... +. ..+|.+..+....+. ..+|++.++||||
T Consensus 31 YL~~~~~~~~~~l~Pd~V~fLGDLfd~-~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHD 109 (193)
T cd08164 31 FLGHIVSMMQFWLKPDAVVVLGDLFSS-QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHD 109 (193)
T ss_pred HHHHHHHHHHHhcCCCEEEEeccccCC-CcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCccc
Confidence 3444444433 3799999999999954 33 344433222222211 1489999999999
Q ss_pred cCC
Q 006591 413 RDY 415 (639)
Q Consensus 413 ~~~ 415 (639)
+.+
T Consensus 110 IG~ 112 (193)
T cd08164 110 VGY 112 (193)
T ss_pred CCC
Confidence 964
No 52
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.61 E-value=4.7e-07 Score=92.77 Aligned_cols=188 Identities=16% Similarity=0.137 Sum_probs=94.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHH--HHHHHHHhhhhhhcCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLV--EWDFFLHQITPVASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~--~wd~f~~~l~~l~~~vP~ 404 (639)
++|+.++|+|.... +. .+.+....+..+++++++.++| +++..||++....... +.....+.+.. .-.-
T Consensus 1 l~i~~~sD~hg~~~-~~----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~---~g~d 72 (252)
T cd00845 1 LTILHTNDLHGHFE-PA----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNA---LGYD 72 (252)
T ss_pred CEEEEecccccCcc-cc----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHh---cCCC
Confidence 58999999994321 10 1223456777888888777788 7799999996544321 11223333332 2245
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCcccccc-cccc-CC---CCCCCCCCeEEEEeCCEEEEEEe--CCCCCC-------
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPY-ETYF-PM---PTPSKDRPWYSIEQASVHFTVIS--TEHDWW------- 470 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y-~~~f-~~---P~~~~~~~~Ysfd~G~v~fi~LD--T~~~~~------- 470 (639)
+.++||||+++...+ +...- .+...++ .... .. ........|-.++.+++++-++. +.....
T Consensus 73 ~~~~GNHe~d~g~~~--l~~~~--~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~ 148 (252)
T cd00845 73 AVTIGNHEFDYGLDA--LAELY--KDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWI 148 (252)
T ss_pred EEeeccccccccHHH--HHHHH--HhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcc
Confidence 577899998632110 00000 0000000 0000 00 00001134556788886554443 322100
Q ss_pred ---CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 471 ---LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 471 ---~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
......+.+++..+. .+.+...+|++.|.+... ..++...+ .+||++|+||.|....
T Consensus 149 ~~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 149 IGLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred cCceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccC
Confidence 001223334332222 135677899999988642 11111111 5899999999998664
No 53
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.61 E-value=1.8e-07 Score=86.18 Aligned_cols=49 Identities=18% Similarity=0.127 Sum_probs=33.0
Q ss_pred EEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 494 LIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 494 vIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
.|+++|+|++...... .......+.+.+++.+++++++|+||.|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~-~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGE-DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCcc-cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 5788888886443211 001122467778888999999999999986654
No 54
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.61 E-value=5.1e-07 Score=91.59 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=45.6
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC----CcHHHHHHHHHhhhhhhc-CCceE
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT----GFLVEWDFFLHQITPVAS-RVSYM 405 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~----g~~~~wd~f~~~l~~l~~-~vP~~ 405 (639)
++++|+|.+.... ......++.+.+.. .+||+|+++||+++.- ......+.+.+.++.+.. ..|++
T Consensus 2 ~~iSDlHl~~~~~-------~~~~~~l~~l~~~~--~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPERP-------DITALFLDFLREEA--RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCCh-------hHHHHHHHHHHhhh--ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 6899999864311 00112233333222 3799999999999631 112223445555666553 58999
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.++||||+.
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999973
No 55
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.60 E-value=4.7e-07 Score=100.11 Aligned_cols=179 Identities=16% Similarity=0.225 Sum_probs=106.4
Q ss_pred HHHHHHHHHHhhc--CCCcEEEEcCCccccCCcH-------HHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCC
Q 006591 354 LSVVKAMSDEVNN--GNVDSVFHIGDISYATGFL-------VEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYST 424 (639)
Q Consensus 354 ~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~-------~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~ 424 (639)
..+++.+++.+++ .++|+|+++||++-..... +......+.+...+..+|+++++||||.-+.+. |.
T Consensus 194 ~~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~---F~- 269 (577)
T KOG3770|consen 194 KRLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL---FA- 269 (577)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh---cC-
Confidence 4567777777654 3499999999999544110 112234456666778999999999999854332 10
Q ss_pred CCCCCcc-cc--cccc---ccC--CCCCCC----CCCeEEE-EeCCEEEEEEeCCCCC----------CCCHHHHHHHHH
Q 006591 425 PDSGGEC-GI--PYET---YFP--MPTPSK----DRPWYSI-EQASVHFTVISTEHDW----------WLNSEQYKWIQK 481 (639)
Q Consensus 425 ~dsgge~-~~--~y~~---~f~--~P~~~~----~~~~Ysf-d~G~v~fi~LDT~~~~----------~~g~~Q~~WL~~ 481 (639)
+.+-.+. .. .|+. .|. +|.... .+.+|.- -+++.++|+||+..-. .....|++|+..
T Consensus 270 ~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~ 349 (577)
T KOG3770|consen 270 PGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVD 349 (577)
T ss_pred CCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHH
Confidence 0000000 00 1111 111 232221 2446654 4689999999996421 345788999999
Q ss_pred HHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC--CCeEEEeCcccccce
Q 006591 482 DLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN--KVDLVLFGHVHNYER 542 (639)
Q Consensus 482 ~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y--~VdlvlsGH~H~YeR 542 (639)
+|.++.. +..-|=+++|.|+-.... .......+-.++.++ -|...|.||.|.-+-
T Consensus 350 ~L~~ae~-~GekVhil~HIPpG~~~c-----~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f 406 (577)
T KOG3770|consen 350 QLQEAES-AGEKVHILGHIPPGDGVC-----LEGWSINFYRIVNRFRSTIAGQFYGHTHIDEF 406 (577)
T ss_pred HHHHHHh-cCCEEEEEEeeCCCCcch-----hhhhhHHHHHHHHHHHHhhhhhccccCcceeE
Confidence 9998753 344478889999854221 112233444555555 244679999998663
No 56
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.46 E-value=4.2e-06 Score=87.17 Aligned_cols=197 Identities=16% Similarity=0.168 Sum_probs=99.2
Q ss_pred eEEEEEecCCCCCCCCCC--ccccCcChHHHHHHHHHHhhcCCCcEEEE-cCCccccCCcHHHH---------HHHHHhh
Q 006591 328 MKFLAYGDMGKAPRDAST--EHYIQPGSLSVVKAMSDEVNNGNVDSVFH-IGDISYATGFLVEW---------DFFLHQI 395 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~--~~~~~pg~~~~~~~l~~~i~~~~pDfVl~-~GDl~y~~g~~~~w---------d~f~~~l 395 (639)
++|+.++|+|..-..... ......+....+..+++++++.+++.++. +||+...... ..+ +...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPL-ADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHH-HHHhhhcccCCCChHHHHH
Confidence 589999999954211100 00011234566777888877777887776 9999964321 222 1233334
Q ss_pred hhhhcCCceEEecCCCCcCCCCCCCccCC--CCCCCccccccc--cc-cCCCCCCCCCCeEEEEeC-CEEEEEEeCCCCC
Q 006591 396 TPVASRVSYMTAIGNHERDYVNSGSVYST--PDSGGECGIPYE--TY-FPMPTPSKDRPWYSIEQA-SVHFTVISTEHDW 469 (639)
Q Consensus 396 ~~l~~~vP~~~v~GNHD~~~~~~~~~y~~--~dsgge~~~~y~--~~-f~~P~~~~~~~~Ysfd~G-~v~fi~LDT~~~~ 469 (639)
..+ .. -+.++||||+++... .+.. ...+ .++- .. +.-.....-..|..++.+ ++++-++.-....
T Consensus 80 n~~--g~-d~~~lGNHe~d~g~~--~l~~~~~~~~----~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~ 150 (277)
T cd07410 80 NAL--GY-DAGTLGNHEFNYGLD--YLDKVIKQAN----FPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQ 150 (277)
T ss_pred Hhc--CC-CEEeecccCcccCHH--HHHHHHHhCC----CCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcc
Confidence 333 33 356789999864211 0000 0000 0000 00 000000012356778888 8665555432110
Q ss_pred ---------------CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEE
Q 006591 470 ---------------WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVL 533 (639)
Q Consensus 470 ---------------~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~Vdlvl 533 (639)
....+..++..+.|++ .+...+|+++|............ .+.....|.++ -+||++|
T Consensus 151 ~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~~----~~~~~~~la~~~~~vD~Il 223 (277)
T cd07410 151 IPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEESLT----GENAAYELAEEVPGIDAIL 223 (277)
T ss_pred cccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccccC----CccHHHHHHhcCCCCcEEE
Confidence 0112234444444543 45678999999987543210000 11222344444 4899999
Q ss_pred eCcccccc
Q 006591 534 FGHVHNYE 541 (639)
Q Consensus 534 sGH~H~Ye 541 (639)
+||.|...
T Consensus 224 gGHsH~~~ 231 (277)
T cd07410 224 TGHQHRRF 231 (277)
T ss_pred eCCCcccc
Confidence 99999754
No 57
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.46 E-value=1.6e-06 Score=89.39 Aligned_cols=187 Identities=18% Similarity=0.203 Sum_probs=95.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHHHH---HHHHHhhhhhhcCCc
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLVEW---DFFLHQITPVASRVS 403 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~~w---d~f~~~l~~l~~~vP 403 (639)
++++.+.|+|.-... ...+.+....+..+++++++.+++ +++.+||+...... ..+ +...+.++.+ ..
T Consensus 1 ~~il~~nd~~~~~~~----~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~-~~~~~g~~~~~~l~~l--~~- 72 (257)
T cd07406 1 FTILHFNDVYEIAPL----DGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLL-STATKGKQMVPVLNAL--GV- 72 (257)
T ss_pred CeEEEEccceeeccc----CCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccc-hhhcCCccHHHHHHhc--CC-
Confidence 578999999832211 011223466777788877777788 99999999954322 122 2233333322 22
Q ss_pred eEEecCCCCcCCCCCCCccCCCCCCCcccccccc---ccCCCCC--CCCCCeEEEEeCCEEE--EEEeCCCCC------C
Q 006591 404 YMTAIGNHERDYVNSGSVYSTPDSGGECGIPYET---YFPMPTP--SKDRPWYSIEQASVHF--TVISTEHDW------W 470 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~---~f~~P~~--~~~~~~Ysfd~G~v~f--i~LDT~~~~------~ 470 (639)
-+.++||||+++... .+...- .+...++-. .+..... ..-+.|..++.+++++ +.+.+.... .
T Consensus 73 d~~~~GNHefd~g~~--~l~~~~--~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~ 148 (257)
T cd07406 73 DLACFGNHEFDFGED--QLQKRL--GESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDP 148 (257)
T ss_pred cEEeecccccccCHH--HHHHHH--hhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCC
Confidence 366899999864211 000000 000000100 0000000 0114577888888654 444443211 0
Q ss_pred C---CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCcccccc
Q 006591 471 L---NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGHVHNYE 541 (639)
Q Consensus 471 ~---g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH~H~Ye 541 (639)
. -.+-.+.+++.++...+.+..-+|++.|-+... +. .+.++ .+||++|+||.|..+
T Consensus 149 ~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 149 EYVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred CcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceEEecccceeE
Confidence 0 112233344444333335677899999987521 11 22333 379999999999866
No 58
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.42 E-value=3.2e-06 Score=88.62 Aligned_cols=210 Identities=17% Similarity=0.179 Sum_probs=98.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHHHH---HHHHHhhhhhhcCCc
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLVEW---DFFLHQITPVASRVS 403 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~~w---d~f~~~l~~l~~~vP 403 (639)
++++.++|+|..-.........+.+....+..+++++++.+++ +++..||+.......+.+ +...+.+..+ ..-
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~--g~D 78 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAM--GVD 78 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhh--CCe
Confidence 4789999999542211000011223456677777777655555 899999999544332222 2223333322 233
Q ss_pred eEEecCCCCcCCCCCCC-ccCCCCC--CCcc--ccccc-cccCCC-----CC--C--CCCCeEEEEeCCEEE--EEEeCC
Q 006591 404 YMTAIGNHERDYVNSGS-VYSTPDS--GGEC--GIPYE-TYFPMP-----TP--S--KDRPWYSIEQASVHF--TVISTE 466 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~-~y~~~ds--gge~--~~~y~-~~f~~P-----~~--~--~~~~~Ysfd~G~v~f--i~LDT~ 466 (639)
+.++||||+++....- ....... ...| ...|+ ..|++- .. + .-..|..++.+++++ |.+-+.
T Consensus 79 -a~t~GNHefd~G~~~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~G~kIgviGl~~~ 157 (288)
T cd07412 79 -ASAVGNHEFDEGYAELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVGGVKVGFIGAVTK 157 (288)
T ss_pred -eeeecccccccCHHHHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEECCEEEEEEeecCC
Confidence 5678999997521100 0000000 0000 00010 011110 00 0 013466678888654 444322
Q ss_pred CC--C-C-------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh--CCCeEEEe
Q 006591 467 HD--W-W-------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK--NKVDLVLF 534 (639)
Q Consensus 467 ~~--~-~-------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~--y~Vdlvls 534 (639)
.. + . .-..-.+-+++.++++...+...+|++.|-.......... ..........++.+ -+||++|.
T Consensus 158 ~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~Ilg 235 (288)
T cd07412 158 DTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFA 235 (288)
T ss_pred CccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEe
Confidence 10 0 0 0112233455544444334677899999988653322100 00011122334444 37999999
Q ss_pred Ccccccce
Q 006591 535 GHVHNYER 542 (639)
Q Consensus 535 GH~H~YeR 542 (639)
||.|....
T Consensus 236 GHsH~~~~ 243 (288)
T cd07412 236 GHTHQAYN 243 (288)
T ss_pred CccCcccc
Confidence 99998653
No 59
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.40 E-value=1.6e-06 Score=86.59 Aligned_cols=186 Identities=13% Similarity=0.092 Sum_probs=91.8
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC-----CcHHHHHH-HHHhhhhhhcCCce
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT-----GFLVEWDF-FLHQITPVASRVSY 404 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~-----g~~~~wd~-f~~~l~~l~~~vP~ 404 (639)
++++|+|.+.... ........+.......++|.++++||+.+.- ......+. +...++......++
T Consensus 1 ~~iSDlHlg~~~~--------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v 72 (217)
T cd07398 1 LFISDLHLGDGGP--------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRV 72 (217)
T ss_pred CEeeeecCCCCCC--------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeE
Confidence 4789999875432 1122233333222235899999999999642 11111222 23344444568899
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La 484 (639)
+.+.||||..... .+......... ......+.+++.+++++.... +......+.|+...+.
T Consensus 73 ~~v~GNHD~~~~~----------------~~~~~~~~~~~--~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~~ 133 (217)
T cd07398 73 YYVPGNHDFLLGD----------------FFAEELGLILL--PDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLGR 133 (217)
T ss_pred EEECCCchHHHHh----------------HHHHHcCCEEe--ccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHhC
Confidence 9999999974210 11111100000 011225677888888876532 2333444555554332
Q ss_pred hcc-----CC-CCCe--EEEEeccCC----ccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 485 SVD-----RS-KTPW--LIFAGHRPM----YSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 485 ~~~-----r~-~~pw--vIV~~H~P~----y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
... .. ...| .+....... .............+.+.+..++++++++++++||+|.....
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 134 NPYDQLLFLNRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred cHHHHHHHhcchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 100 00 0000 000000000 00000011122334566777788999999999999987643
No 60
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.33 E-value=1.1e-05 Score=83.27 Aligned_cols=162 Identities=15% Similarity=0.074 Sum_probs=85.9
Q ss_pred CCCcEEEEcCCccccCCcH-----------HHHHHHHHhhhhhh-cCCceEEecCCCCcCCCCCCCccCCCCCCCccccc
Q 006591 367 GNVDSVFHIGDISYATGFL-----------VEWDFFLHQITPVA-SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIP 434 (639)
Q Consensus 367 ~~pDfVl~~GDl~y~~g~~-----------~~wd~f~~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~ 434 (639)
.++|++|++||+.-..... ..+..|.+.++... ..+|++.+.||||... .+.....|++..
T Consensus 27 ~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~~~-----~l~~l~~gg~v~-- 99 (262)
T cd00844 27 TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEASN-----YLWELPYGGWVA-- 99 (262)
T ss_pred CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCCHH-----HHHhhcCCCeec--
Confidence 5799999999996332111 12334444444332 4677899999999520 000000011100
Q ss_pred cccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC---CC--------CCHHHHHHHH-------HHHhhccCCCCCeEEE
Q 006591 435 YETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD---WW--------LNSEQYKWIQ-------KDLASVDRSKTPWLIF 496 (639)
Q Consensus 435 y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~---~~--------~g~~Q~~WL~-------~~La~~~r~~~pwvIV 496 (639)
...+.+- ....+++++++|..|..... +. ..+.++..+. ..|... +.+--|+
T Consensus 100 -~Ni~~Lg------~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDIl 169 (262)
T cd00844 100 -PNIYYLG------YAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDIF 169 (262)
T ss_pred -CcEEEec------CCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcEE
Confidence 0000000 11246678999998875321 11 1233333211 112221 1123699
Q ss_pred EeccCCccCCCCCCc---------hh------HHHHHHHHHHHHhCCCeEEEeCcccc-cceeec
Q 006591 497 AGHRPMYSSLDGFLS---------VD------KFFVKSVEPLLLKNKVDLVLFGHVHN-YERTCS 545 (639)
Q Consensus 497 ~~H~P~y~~~~~~~~---------~~------~~~r~~l~~Ll~~y~VdlvlsGH~H~-YeRt~p 545 (639)
++|.|+..-...... .. ......+..|+++.+....|+||.|. |++..|
T Consensus 170 LSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 170 LSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred EeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecC
Confidence 999999765431110 00 11235678899999999999999999 776644
No 61
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.23 E-value=1.4e-05 Score=82.67 Aligned_cols=185 Identities=12% Similarity=0.100 Sum_probs=95.3
Q ss_pred eEEEEEecCCCCCCCCCC--------ccccCcChHHHHHHHHHHhhcC-CCcEE-EEcCCccccCCcHHHHHHHHHhhhh
Q 006591 328 MKFLAYGDMGKAPRDAST--------EHYIQPGSLSVVKAMSDEVNNG-NVDSV-FHIGDISYATGFLVEWDFFLHQITP 397 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~--------~~~~~pg~~~~~~~l~~~i~~~-~pDfV-l~~GDl~y~~g~~~~wd~f~~~l~~ 397 (639)
++|+..+|+|..-..... ....+.|....+..+++++++. ++|.+ +.+||+...... ..+......++
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~- 78 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMVD- 78 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHHH-
Confidence 478899999865322100 1111234466777888887766 88977 579999965432 22221112222
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCC-----------CCCCCCeEEEEeCCEE--EEEEe
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPT-----------PSKDRPWYSIEQASVH--FTVIS 464 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~-----------~~~~~~~Ysfd~G~v~--fi~LD 464 (639)
.+..+++.++.||||+++.... . ....+.+..|- ...-..|..++.++++ ||.+.
T Consensus 79 ~l~~~g~da~~GNHefd~g~~~--l----------~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~ 146 (264)
T cd07411 79 ALNALGVDAMVGHWEFTYGPER--V----------RELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQT 146 (264)
T ss_pred HHHhhCCeEEecccccccCHHH--H----------HHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEec
Confidence 2233556665599998642110 0 00000011110 0001236667888855 45554
Q ss_pred CCCCCC--C--------CHHHHHHHHHHHhhcc-CCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEE
Q 006591 465 TEHDWW--L--------NSEQYKWIQKDLASVD-RSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLV 532 (639)
Q Consensus 465 T~~~~~--~--------g~~Q~~WL~~~La~~~-r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~Vdlv 532 (639)
+..... . .....+.+++.+++.. +.+...+|++.|-+... +. .+.++ .+||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~--------~~-------~la~~~~~iDli 211 (264)
T cd07411 147 FPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGLPV--------DV-------ELAERVPGIDVI 211 (264)
T ss_pred cCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCchh--------hH-------HHHhcCCCCcEE
Confidence 431100 0 1223444555433321 24567899999987531 11 22233 479999
Q ss_pred EeCcccccc
Q 006591 533 LFGHVHNYE 541 (639)
Q Consensus 533 lsGH~H~Ye 541 (639)
|+||.|...
T Consensus 212 lgGH~H~~~ 220 (264)
T cd07411 212 LSGHTHERT 220 (264)
T ss_pred EeCcccccc
Confidence 999999743
No 62
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=98.23 E-value=2.9e-06 Score=84.68 Aligned_cols=70 Identities=20% Similarity=0.273 Sum_probs=45.4
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh--------cCCCcEEEEcCCccccCCcHHHHHHHHHhhhh--hhc
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN--------NGNVDSVFHIGDISYATGFLVEWDFFLHQITP--VAS 400 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~--------~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~--l~~ 400 (639)
+++||+|. ....++++++.+. ..+.|.++++||+++.+....+-=+++..+.. ...
T Consensus 1 ~vi~DIHG--------------~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~ 66 (208)
T cd07425 1 VAIGDLHG--------------DLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKA 66 (208)
T ss_pred CEEeCccC--------------CHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhc
Confidence 47899994 3567778877653 34689999999999754433221122222211 123
Q ss_pred CCceEEecCCCCcC
Q 006591 401 RVSYMTAIGNHERD 414 (639)
Q Consensus 401 ~vP~~~v~GNHD~~ 414 (639)
..+++++.||||..
T Consensus 67 ~~~v~~l~GNHE~~ 80 (208)
T cd07425 67 GGKVHFLLGNHELM 80 (208)
T ss_pred CCeEEEeeCCCcHH
Confidence 56899999999974
No 63
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=98.22 E-value=1.9e-05 Score=82.51 Aligned_cols=192 Identities=15% Similarity=0.117 Sum_probs=95.0
Q ss_pred eEEEEEecCCCCCCCCCC-------ccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHH--HHHHHHHhhhh
Q 006591 328 MKFLAYGDMGKAPRDAST-------EHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLV--EWDFFLHQITP 397 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~-------~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~--~wd~f~~~l~~ 397 (639)
++|+..+|+|..-..... ....+.+....+..+++++++.+++ +++.+||+........ +.+...+.+..
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~ 80 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNL 80 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHh
Confidence 478999999964221100 0111223456667777777666677 5666999985433211 11222333332
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc-cccCCCC-----CCCCCCeEEEEeCCEEE--EEEeCCCC-
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE-TYFPMPT-----PSKDRPWYSIEQASVHF--TVISTEHD- 468 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~-~~f~~P~-----~~~~~~~Ysfd~G~v~f--i~LDT~~~- 468 (639)
+ ... +.++||||+++.... ....- .+...++- ....... ...-..|..++.+++++ |.+-+...
T Consensus 81 ~--g~D-~~~lGNHefd~G~~~--l~~~~--~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~ 153 (281)
T cd07409 81 L--GYD-AMTLGNHEFDDGVEG--LAPFL--NNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTT 153 (281)
T ss_pred c--CCC-EEEeccccccCCHHH--HHHHH--HhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCccc
Confidence 2 344 456799999752110 00000 00000000 0000000 00013466778888654 44443221
Q ss_pred -C-C--C---CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCccccc
Q 006591 469 -W-W--L---NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGHVHNY 540 (639)
Q Consensus 469 -~-~--~---g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH~H~Y 540 (639)
. . . -.+..+.+++.++++...+..-+|++.|-.... + ..+.++ -+||+++.||.|..
T Consensus 154 ~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~--------d-------~~la~~~~giD~IiggH~H~~ 218 (281)
T cd07409 154 ELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV--------D-------KEIARKVPGVDVIVGGHSHTF 218 (281)
T ss_pred ccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh--------H-------HHHHHcCCCCcEEEeCCcCcc
Confidence 0 0 0 122345566666655444577799999976421 1 122333 48999999999996
Q ss_pred c
Q 006591 541 E 541 (639)
Q Consensus 541 e 541 (639)
.
T Consensus 219 ~ 219 (281)
T cd07409 219 L 219 (281)
T ss_pred c
Confidence 4
No 64
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.21 E-value=0.00013 Score=70.57 Aligned_cols=64 Identities=23% Similarity=0.263 Sum_probs=42.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
++++++||+|.... ......+.....++|+|+|+||.+.... ...+.. . -..+++.|
T Consensus 2 m~ilviSDtH~~~~--------------~~~~~~~~~~~~~~d~vih~GD~~~~~~-~~~l~~---~-----~~~~i~~V 58 (172)
T COG0622 2 MKILVISDTHGPLR--------------AIEKALKIFNLEKVDAVIHAGDSTSPFT-LDALEG---G-----LAAKLIAV 58 (172)
T ss_pred cEEEEEeccCCChh--------------hhhHHHHHhhhcCCCEEEECCCcCCccc-hHHhhc---c-----cccceEEE
Confidence 68999999996531 1223333344579999999999995432 111111 0 15688999
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
.||.|..
T Consensus 59 ~GN~D~~ 65 (172)
T COG0622 59 RGNCDGE 65 (172)
T ss_pred EccCCCc
Confidence 9999974
No 65
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=98.21 E-value=2.3e-05 Score=80.76 Aligned_cols=186 Identities=16% Similarity=0.141 Sum_probs=92.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHH---HHHHHhhhhhhcCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEW---DFFLHQITPVASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~w---d~f~~~l~~l~~~vP~ 404 (639)
++++.++|+|..-.... .+.+....+..+++++++.+.++++.+||+...... ..+ ....+.+..+ ...+
T Consensus 1 i~il~~~D~H~~~~~~~----~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~--g~d~ 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDD----NNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAV--GYDA 73 (257)
T ss_pred CEEEEeccCcccccCCC----CccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhc--CCcE
Confidence 48999999996432110 122335556667776655467899999999854321 112 1222333222 3444
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCC---------C--CCCCeEEEEeC-CE--EEEEEeCCCC--
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTP---------S--KDRPWYSIEQA-SV--HFTVISTEHD-- 468 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~---------~--~~~~~Ysfd~G-~v--~fi~LDT~~~-- 468 (639)
.++||||+++... . ...+.+.+..|.- + .-..|-.++.+ ++ -|+.+-+...
T Consensus 74 -~~~GNHefd~G~~--~----------l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~ 140 (257)
T cd07408 74 -VTPGNHEFDYGLD--R----------LKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETAT 140 (257)
T ss_pred -EccccccccCCHH--H----------HHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCccc
Confidence 5689999964211 0 0000011111100 0 01235556777 64 4555544321
Q ss_pred C-CCC-------HHHHHHHHHH-HhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCccc
Q 006591 469 W-WLN-------SEQYKWIQKD-LASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGHVH 538 (639)
Q Consensus 469 ~-~~g-------~~Q~~WL~~~-La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH~H 538 (639)
+ .+. ..-.+-+++. .....+.+..-+|++.|.+...... ... ..+ +.++ .+||++|.||.|
T Consensus 141 ~~~~~~~~~~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~--~~~----~~~---la~~~~giDvIigGH~H 211 (257)
T cd07408 141 KTHPKNVKDVTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSS--PWT----STE---LAANVTGIDLIIDGHSH 211 (257)
T ss_pred ccCccccCCcEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCC--Ccc----HHH---HHHhCCCceEEEeCCCc
Confidence 0 000 0112223333 2222234677899999988754321 111 112 2223 489999999999
Q ss_pred ccce
Q 006591 539 NYER 542 (639)
Q Consensus 539 ~YeR 542 (639)
....
T Consensus 212 ~~~~ 215 (257)
T cd07408 212 TTIE 215 (257)
T ss_pred cccc
Confidence 8654
No 66
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.12 E-value=4.8e-05 Score=85.76 Aligned_cols=80 Identities=13% Similarity=0.226 Sum_probs=55.4
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh---------cCCCcEEEEcCCccccCCc------------
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN---------NGNVDSVFHIGDISYATGF------------ 384 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~---------~~~pDfVl~~GDl~y~~g~------------ 384 (639)
..+++++++|+|.+.... ....++.+++.+. ..+++.++++||++...+.
T Consensus 242 ~~~~i~~ISDlHlgs~~~---------~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEF---------LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcch---------hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchh
Confidence 568999999999764311 1233455555554 5689999999999964221
Q ss_pred -HHHHHHHHHhhhhhhcCCceEEecCCCCcC
Q 006591 385 -LVEWDFFLHQITPVASRVSYMTAIGNHERD 414 (639)
Q Consensus 385 -~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~ 414 (639)
..+++.+.+.++.+...+|++.++||||..
T Consensus 313 ~~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 313 IYEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred hHHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 112345556666666789999999999974
No 67
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.11 E-value=8.2e-06 Score=83.96 Aligned_cols=85 Identities=12% Similarity=0.166 Sum_probs=57.4
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH-HHHHHHHHhhhhhhc-C-Cce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-VEWDFFLHQITPVAS-R-VSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~-~~wd~f~~~l~~l~~-~-vP~ 404 (639)
+||++++|+|.+....... ..+.....++++.+.+.+.++|+|+++||+.+..... .....+.+.++.+.. . +|+
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v 78 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--RLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPI 78 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--hHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceE
Confidence 5899999999875422111 1111245678888888888999999999999765332 222334455555432 3 899
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
++++||||..
T Consensus 79 ~~i~GNHD~~ 88 (253)
T TIGR00619 79 VVISGNHDSA 88 (253)
T ss_pred EEEccCCCCh
Confidence 9999999973
No 68
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=98.08 E-value=2.8e-05 Score=83.61 Aligned_cols=127 Identities=15% Similarity=0.094 Sum_probs=77.7
Q ss_pred CceEEEEEecCCCCCCCCCC--cc-ccCcChHHHHHHHHHHh-hcCCCcEEEEcCCccccCC--cHHHHHHHHHhhhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDAST--EH-YIQPGSLSVVKAMSDEV-NNGNVDSVFHIGDISYATG--FLVEWDFFLHQITPVA 399 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~--~~-~~~pg~~~~~~~l~~~i-~~~~pDfVl~~GDl~y~~g--~~~~wd~f~~~l~~l~ 399 (639)
+.+|+++++|.|.-...+.. -. ..+=++...+++..+.+ ...+||.++++||+.+.+. ...+|.+..+.++.+.
T Consensus 47 n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf 126 (410)
T KOG3662|consen 47 NSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIF 126 (410)
T ss_pred CceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhh
Confidence 67999999999976532110 00 00111122233333332 2479999999999997542 2456765555555554
Q ss_pred ---cCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC
Q 006591 400 ---SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH 467 (639)
Q Consensus 400 ---~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~ 467 (639)
..+|++.++||||.++... .-.+....|++.|+ +....|+.|+..|+++|++.
T Consensus 127 ~~k~~~~~~~i~GNhDIGf~~~--------~~~~~i~Rfe~~fg-------~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 127 GRKGNIKVIYIAGNHDIGFGNE--------LIPEWIDRFESVFG-------PTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred CCCCCCeeEEeCCccccccccc--------cchhHHHHHHHhhc-------chhhhhccCCceeEEeeehh
Confidence 4789999999999964221 00111234555554 23457899999999999875
No 69
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.07 E-value=7.5e-06 Score=81.70 Aligned_cols=74 Identities=19% Similarity=0.163 Sum_probs=44.5
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHH----hhhhhh-cCCceE
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLH----QITPVA-SRVSYM 405 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~----~l~~l~-~~vP~~ 405 (639)
++++|.|.++.. |.....+..+++... .+.|.++++||+++.---...|.++.+ .+..++ ..+|++
T Consensus 1 lFISDlHL~~~~--------p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 1 LFISDLHLGPKR--------PALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred CeeeccccCCCC--------cHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEE
Confidence 368999987532 222233333443322 356999999999954211123444333 333444 469999
Q ss_pred EecCCCCc
Q 006591 406 TAIGNHER 413 (639)
Q Consensus 406 ~v~GNHD~ 413 (639)
.+.||||+
T Consensus 72 ~i~GN~Df 79 (237)
T COG2908 72 YIHGNHDF 79 (237)
T ss_pred EecCchHH
Confidence 99999996
No 70
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.05 E-value=0.00017 Score=74.03 Aligned_cols=176 Identities=17% Similarity=0.159 Sum_probs=89.9
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC-CcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT-GFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~-g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
|++++||.=.. ||...+.+.|-+..++.++||++..||++-.. +.. ....+.+..+ .+-++ +
T Consensus 1 ~ilfigdi~g~-----------~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~---~~~~~~L~~~--G~D~i-T 63 (255)
T cd07382 1 KILFIGDIVGK-----------PGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGIT---PKIAKELLSA--GVDVI-T 63 (255)
T ss_pred CEEEEEeCCCH-----------HHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCC---HHHHHHHHhc--CCCEE-E
Confidence 57899996421 33333334443333457899999999998543 222 2222333222 44444 4
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHHHHhh
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTE--HDWWLNSEQYKWIQKDLAS 485 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~--~~~~~g~~Q~~WL~~~La~ 485 (639)
.|||+++... .+..-+.. . ...+ .-..|.......|..++.+++++-+++-. ........-++-+++.+++
T Consensus 64 lGNH~fD~ge---l~~~l~~~--~-~~l~-~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~ 136 (255)
T cd07382 64 MGNHTWDKKE---ILDFIDEE--P-RLLR-PANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEE 136 (255)
T ss_pred ecccccCcch---HHHHHhcC--c-CceE-eeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHH
Confidence 5999997431 10000000 0 0000 00122222235578888888776665532 1111111123345566655
Q ss_pred ccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 486 VDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 486 ~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
.+. +...+||.+|--.. . + ...+.. .-.-+||+++.||.|..-
T Consensus 137 lk~-~~D~IIV~~H~g~t-------s--E--k~ala~-~ldg~VdvIvGtHTHv~t 179 (255)
T cd07382 137 LKE-EADIIFVDFHAEAT-------S--E--KIALGW-YLDGRVSAVVGTHTHVQT 179 (255)
T ss_pred Hhc-CCCEEEEEECCCCC-------H--H--HHHHHH-hCCCCceEEEeCCCCccC
Confidence 433 56789999997431 0 1 112221 113369999999999853
No 71
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=98.01 E-value=0.00043 Score=71.42 Aligned_cols=175 Identities=17% Similarity=0.149 Sum_probs=96.1
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-cCCCcEEEEcCCccccC-CcHHHHHHHHHhhhhhhcCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-NGNVDSVFHIGDISYAT-GFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfVl~~GDl~y~~-g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+|++++||.=.. || ...+...+..++ +.++||++..||++-.+ +... ...+.+.. ..+-++
T Consensus 1 m~ilfiGDi~G~-----------~G-r~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~---~~~~~L~~--~GvDvi 63 (266)
T TIGR00282 1 IKFLFIGDVYGK-----------AG-RKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTL---KIYEFLKQ--SGVNYI 63 (266)
T ss_pred CeEEEEEecCCH-----------HH-HHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCH---HHHHHHHh--cCCCEE
Confidence 589999997521 22 234445555544 46799999999999432 2221 22222322 356665
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC-CCC-C--CHHHHHHHHH
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH-DWW-L--NSEQYKWIQK 481 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~-~~~-~--g~~Q~~WL~~ 481 (639)
.. |||+++... .+..-+. ++ ...+....|....+..|..++.++.++-+++-.. .+. + ...-.+-+++
T Consensus 64 T~-GNH~~Dkge---~~~~i~~--~~--~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~ 135 (266)
T TIGR00282 64 TM-GNHTWFQKL---ILDVVIN--QK--DLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKE 135 (266)
T ss_pred Ec-cchhccCcH---HHHHHhc--cc--cccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHH
Confidence 55 999997421 1100000 00 0111123333333456777888887777766432 111 1 1112233455
Q ss_pred HHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccc
Q 006591 482 DLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540 (639)
Q Consensus 482 ~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Y 540 (639)
.+++.+ .+++.+||.+|--. +. .+.....+-+-+|++|+.-|.|..
T Consensus 136 ~i~~lk-~~~d~IIVd~Haea-----------ts-EK~a~~~~ldg~vsaVvGtHtHV~ 181 (266)
T TIGR00282 136 LINMLK-KDCDLIFVDFHAET-----------TS-EKNAFGMAFDGYVTAVVGTHTHVP 181 (266)
T ss_pred HHHhhh-cCCCEEEEEeCCCC-----------HH-HHHHHHHHhCCCccEEEeCCCCCC
Confidence 555443 24678999999653 11 234456677789999999999984
No 72
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.99 E-value=1.5e-05 Score=87.28 Aligned_cols=85 Identities=16% Similarity=0.199 Sum_probs=59.1
Q ss_pred eEEEEEecCCCCC-CCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH-HHHHHHHHhhhhhh-cCCce
Q 006591 328 MKFLAYGDMGKAP-RDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-VEWDFFLHQITPVA-SRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~-~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~-~~wd~f~~~l~~l~-~~vP~ 404 (639)
+||++.+|+|.+. ...... ........+.++++.+.+.++||||++||+.+..... ..-..+.+.++.+. .++|+
T Consensus 1 mkilHtSD~HLG~~~~~~~~--r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPS--RLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhhccCcc--chHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 5899999999983 211100 1112356778888888889999999999999764322 22234555565553 47999
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
+++.||||..
T Consensus 79 ~~I~GNHD~~ 88 (390)
T COG0420 79 VVIAGNHDSP 88 (390)
T ss_pred EEecCCCCch
Confidence 9999999974
No 73
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.94 E-value=0.00019 Score=75.16 Aligned_cols=202 Identities=15% Similarity=0.106 Sum_probs=91.0
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-----CCCcEEEEcCCccccCCcHHHHH---HHHHhhhhhh
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-----GNVDSVFHIGDISYATGFLVEWD---FFLHQITPVA 399 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-----~~pDfVl~~GDl~y~~g~~~~wd---~f~~~l~~l~ 399 (639)
++++..+|+|..-.... ...+....+..+++++++ ...-+++.+||+..... ...+. .-.+.+..+
T Consensus 1 ltIl~tnD~Hg~l~~~~----~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~-~~~~~~g~~~~~~~n~~- 74 (285)
T cd07405 1 ITILHTNDHHGHFWPNG----TGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVP-ESDLQDAEPDFRGMNLV- 74 (285)
T ss_pred CEEEEEcccccccccCC----CCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCch-hHHhcCcchHHHHHHhh-
Confidence 47899999996532210 112234445555555443 23458889999984322 22221 112222222
Q ss_pred cCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEE--EeCCCCC---CC---
Q 006591 400 SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTV--ISTEHDW---WL--- 471 (639)
Q Consensus 400 ~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~--LDT~~~~---~~--- 471 (639)
..- ..++||||+++.... +................+.......-..|..++.+++++-+ +-+.... ..
T Consensus 75 -g~D-a~~~GNHEfD~G~~~--L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~ 150 (285)
T cd07405 75 -GYD-AMAVGNHEFDNPLEV--LRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYF 150 (285)
T ss_pred -CCc-EEeecccccccCHHH--HHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCCc
Confidence 333 346799999752110 00000000000000000000000011346677888866544 4332110 00
Q ss_pred -C---HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 472 -N---SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 472 -g---~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
+ .+..+=+++.+++....+..-+|++.|-.............. ...+...+...+||++|.||.|...
T Consensus 151 ~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~~~~~~--~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 151 EGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHGSNAPG--DVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccccccCch--HHHHHHhcCCCCCCEEEeCCCCccc
Confidence 0 112222333333322235677999999987543211111011 1223333323589999999999865
No 74
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.94 E-value=2.1e-05 Score=84.40 Aligned_cols=85 Identities=18% Similarity=0.248 Sum_probs=56.0
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCC-cH-HHHHHHHH-hhhhhh-cCCc
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG-FL-VEWDFFLH-QITPVA-SRVS 403 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g-~~-~~wd~f~~-~l~~l~-~~vP 403 (639)
+||++++|+|.+..... ..........++++++.+.+.++|+|+++||+.+... .. .......+ .++.+. ..+|
T Consensus 1 MKilhiSD~HLG~~~~~--~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~ 78 (340)
T PHA02546 1 MKILLIGDQHLGVRKDD--PWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGIT 78 (340)
T ss_pred CeEEEEeeecCCCcCCC--hhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 58999999998753211 1111113467788888888899999999999997642 22 22222222 233332 3799
Q ss_pred eEEecCCCCcC
Q 006591 404 YMTAIGNHERD 414 (639)
Q Consensus 404 ~~~v~GNHD~~ 414 (639)
++.++||||..
T Consensus 79 v~~I~GNHD~~ 89 (340)
T PHA02546 79 LHVLVGNHDMY 89 (340)
T ss_pred EEEEccCCCcc
Confidence 99999999974
No 75
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.92 E-value=0.00015 Score=89.78 Aligned_cols=194 Identities=17% Similarity=0.136 Sum_probs=96.3
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEE-cCCccccCCcHH--HHHHHHHhhhhhhcCCc
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFH-IGDISYATGFLV--EWDFFLHQITPVASRVS 403 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~-~GDl~y~~g~~~--~wd~f~~~l~~l~~~vP 403 (639)
.+++++++|+|..- . ....+..+++++++.+++.++. +||++....... +.....+.+..+ -.
T Consensus 660 ~l~Il~~nD~Hg~l-~----------g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l---g~ 725 (1163)
T PRK09419 660 ELTILHTNDFHGHL-D----------GAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM---GY 725 (1163)
T ss_pred EEEEEEEeecccCC-C----------CHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc---CC
Confidence 58999999999432 1 1344566666666677887766 999985432211 112233333322 22
Q ss_pred eEEecCCCCcCCCCCCCccCCCCCC-Ccccccccc-ccCC-------CCCC----CCCCeEEEEeCCEE--EEEEeCCCC
Q 006591 404 YMTAIGNHERDYVNSGSVYSTPDSG-GECGIPYET-YFPM-------PTPS----KDRPWYSIEQASVH--FTVISTEHD 468 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~~y~~~dsg-ge~~~~y~~-~f~~-------P~~~----~~~~~Ysfd~G~v~--fi~LDT~~~ 468 (639)
-+.++||||+++....-.-.....+ .+....|.. .|++ ...+ .-..|.-++.++++ ||.+-+..-
T Consensus 726 d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~ 805 (1163)
T PRK09419 726 DASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPET 805 (1163)
T ss_pred CEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEeccccc
Confidence 3569999999743210000000000 000000100 0110 0000 01356677888855 555544310
Q ss_pred --C-CC-------CHHHHHHHHHHHhhcc-CCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCeEEEeCc
Q 006591 469 --W-WL-------NSEQYKWIQKDLASVD-RSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVDLVLFGH 536 (639)
Q Consensus 469 --~-~~-------g~~Q~~WL~~~La~~~-r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH 536 (639)
+ .+ -....+.+++..++.. ..+...+|++.|......... . ......|.++. +||++|.||
T Consensus 806 ~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~-----~~~~~~lA~~v~gIDvIigGH 878 (1163)
T PRK09419 806 AYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--G-----EITGLELAKKVKGVDAIISAH 878 (1163)
T ss_pred ccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--c-----ccHHHHHHHhCCCCCEEEeCC
Confidence 0 00 1122333444444432 245778999999987543211 1 11223444443 799999999
Q ss_pred ccccc
Q 006591 537 VHNYE 541 (639)
Q Consensus 537 ~H~Ye 541 (639)
.|..-
T Consensus 879 sH~~~ 883 (1163)
T PRK09419 879 THTLV 883 (1163)
T ss_pred CCccc
Confidence 99854
No 76
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.91 E-value=3e-05 Score=85.13 Aligned_cols=85 Identities=15% Similarity=0.187 Sum_probs=54.4
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHH-HHHHHHhhhhhh-cCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVE-WDFFLHQITPVA-SRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~-wd~f~~~l~~l~-~~vP~~ 405 (639)
+||++++|+|.+........ .......++++++.+.+.+||+|+++||+.+....... ...+.+.+..+. ..+|++
T Consensus 1 mkilh~SDlHlG~~~~~~~~--~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~ 78 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSR--AAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLV 78 (407)
T ss_pred CEEEEEcccCCCCcccCccc--HHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEE
Confidence 58999999998743110000 00123456778888888999999999999965432221 122333333332 368999
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
+++||||..
T Consensus 79 ~I~GNHD~~ 87 (407)
T PRK10966 79 VLAGNHDSV 87 (407)
T ss_pred EEcCCCCCh
Confidence 999999973
No 77
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=97.89 E-value=0.00036 Score=72.98 Aligned_cols=197 Identities=16% Similarity=0.174 Sum_probs=92.2
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcCh----HHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHH----HHHHHHHhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGS----LSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLV----EWDFFLHQIT 396 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~----~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~----~wd~f~~~l~ 396 (639)
..++|+..+|+|..-....... ...+. ...++++.+..++.+++ +++..||......... .+....+.+
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~-~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~m- 81 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDP-NYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIF- 81 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcc-cccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHH-
Confidence 4689999999996422110000 01111 22234443333334555 6778999985432211 222222333
Q ss_pred hhhcCCce-EEecCCCCcCCCCCCCcc-C--CCCCCCc--cccccccc---cCCCCCCCCCCeEEEEeC-CEE--EEEEe
Q 006591 397 PVASRVSY-MTAIGNHERDYVNSGSVY-S--TPDSGGE--CGIPYETY---FPMPTPSKDRPWYSIEQA-SVH--FTVIS 464 (639)
Q Consensus 397 ~l~~~vP~-~~v~GNHD~~~~~~~~~y-~--~~dsgge--~~~~y~~~---f~~P~~~~~~~~Ysfd~G-~v~--fi~LD 464 (639)
..+++ ..++||||+++...+-.+ . .+..... |...+... ...| .-..|..++.+ +++ ||.+-
T Consensus 82 ---N~mgyDa~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~---~~~~y~i~~~~~G~kIgiiGlt 155 (282)
T cd07407 82 ---RMMPYDLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVP---IGSRYRKFTTKHGLRVLAFGFL 155 (282)
T ss_pred ---HhcCCcEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccc---cccceEEEEcCCCcEEEEEEEe
Confidence 33343 568999999642211000 0 0000000 00000000 0001 01246667776 655 55554
Q ss_pred CCCCC-------CC--CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCe-EEE
Q 006591 465 TEHDW-------WL--NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVD-LVL 533 (639)
Q Consensus 465 T~~~~-------~~--g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~Vd-lvl 533 (639)
+.... .. ...+.+|+.+.|++ .+..-+|+++|-...... ...+....+.++. ++| ++|
T Consensus 156 t~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~--------~~~~~~~~la~~~~~id~~Ii 224 (282)
T cd07407 156 FDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA--------EFKVLHDAIRKIFPDTPIQFL 224 (282)
T ss_pred cccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc--------cHHHHHHHHHHhCCCCCEEEE
Confidence 43210 11 12233488777873 356779999998864331 1111122334444 577 799
Q ss_pred eCcccccc
Q 006591 534 FGHVHNYE 541 (639)
Q Consensus 534 sGH~H~Ye 541 (639)
.||.|...
T Consensus 225 ~GHsH~~~ 232 (282)
T cd07407 225 GGHSHVRD 232 (282)
T ss_pred eCCccccc
Confidence 99999753
No 78
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.78 E-value=0.00044 Score=79.02 Aligned_cols=184 Identities=16% Similarity=0.148 Sum_probs=90.1
Q ss_pred eEEEEEecCCCCCCCCCC------c-cccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHH--HHHHHHHhhhh
Q 006591 328 MKFLAYGDMGKAPRDAST------E-HYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLV--EWDFFLHQITP 397 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~------~-~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~--~wd~f~~~l~~ 397 (639)
++|+.+.|+|..-..... + .....+....+..+++++++..+ -+++.+||+........ ..+.-.+.+..
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~ 80 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNA 80 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhc
Confidence 578999999864221100 0 01122345566666666654444 57889999985432111 11122222222
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc--cccCCC-------CC----CCCCCeEEEEeCC--EEEEE
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE--TYFPMP-------TP----SKDRPWYSIEQAS--VHFTV 462 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~--~~f~~P-------~~----~~~~~~Ysfd~G~--v~fi~ 462 (639)
+ --=..++||||+++.... . ..+. ..|++- .. ..-..|..++.++ +-||.
T Consensus 81 ~---g~Da~~lGNHEFd~G~~~--l----------~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiG 145 (550)
T TIGR01530 81 A---GFDFFTLGNHEFDAGNEG--L----------KEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIG 145 (550)
T ss_pred c---CCCEEEeccccccCCHHH--H----------HHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEE
Confidence 1 223578999999752110 0 0000 001100 00 0113567788888 55677
Q ss_pred EeCCCC-C---CCC-----HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCeEE
Q 006591 463 ISTEHD-W---WLN-----SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVDLV 532 (639)
Q Consensus 463 LDT~~~-~---~~g-----~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~Vdlv 532 (639)
|.+... . .++ ....+=+++..+...+....-+|++.|..... + ..+.++. +||++
T Consensus 146 l~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~~--------d-------~~la~~~~~iD~I 210 (550)
T TIGR01530 146 LDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGFEK--------N-------CEIAQKINDIDVI 210 (550)
T ss_pred eecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCcHH--------H-------HHHHhcCCCCCEE
Confidence 754211 0 111 01122233322222224567799999976321 1 1233333 79999
Q ss_pred EeCcccccc
Q 006591 533 LFGHVHNYE 541 (639)
Q Consensus 533 lsGH~H~Ye 541 (639)
|.||.|.+-
T Consensus 211 igGHsH~~~ 219 (550)
T TIGR01530 211 VSGDSHYLL 219 (550)
T ss_pred EeCCCCccc
Confidence 999999954
No 79
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.77 E-value=0.00025 Score=81.19 Aligned_cols=199 Identities=16% Similarity=0.147 Sum_probs=91.0
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-----CCCcEEEEcCCccccCCcHHHHH---HHHHhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-----GNVDSVFHIGDISYATGFLVEWD---FFLHQITP 397 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-----~~pDfVl~~GDl~y~~g~~~~wd---~f~~~l~~ 397 (639)
..++|+.++|+|..-.... + ..+....+..+++.+++ ...-+++..||+.... ....+. ...+.+..
T Consensus 33 ~~ltil~tnD~Hg~~~~~~---~-~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g~~~i~~mN~ 107 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNE---Y-GEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDAEPDFRGMNL 107 (551)
T ss_pred eEEEEEEecccCCCccccc---c-CCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCCchhHHHHhc
Confidence 4689999999997532110 0 01123334444444432 2345788899998432 122221 11222222
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc--c-ccCCCCCCCCCCeEEEEeCCEEE--EEEeCCCC--C-
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE--T-YFPMPTPSKDRPWYSIEQASVHF--TVISTEHD--W- 469 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~--~-~f~~P~~~~~~~~Ysfd~G~v~f--i~LDT~~~--~- 469 (639)
+ ..- ..++||||+++... .+.... .+..-++- . +........-..|..++.+++++ |.+-+... +
T Consensus 108 ~--g~D-a~tlGNHEFD~G~~--~L~~~~--~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 108 I--GYD-AMAVGNHEFDNPLS--VLRKQE--KWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred C--CCC-EEcccccccCcCHH--HHHHhh--ccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 1 333 45679999975321 000000 00000000 0 00000000113567778888654 54433221 1
Q ss_pred CC-------CHHHHHHHHHHHhhccC-CCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC---CCeEEEeCccc
Q 006591 470 WL-------NSEQYKWIQKDLASVDR-SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN---KVDLVLFGHVH 538 (639)
Q Consensus 470 ~~-------g~~Q~~WL~~~La~~~r-~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y---~VdlvlsGH~H 538 (639)
.+ -....+-+++..++... .+..-+|++.|.............. .-..|.++. +||++|.||.|
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~~~~~-----~d~~la~~~~~~~IDvIlgGHsH 255 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHGSNAP-----GDVEMARSLPAGGLDMIVGGHSQ 255 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccCCCCc-----cHHHHHHhCCccCceEEEeCCCC
Confidence 00 01112223333333322 4577899999988754321110000 002233333 79999999999
Q ss_pred ccc
Q 006591 539 NYE 541 (639)
Q Consensus 539 ~Ye 541 (639)
..-
T Consensus 256 ~~~ 258 (551)
T PRK09558 256 DPV 258 (551)
T ss_pred ccc
Confidence 854
No 80
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.71 E-value=0.00031 Score=79.84 Aligned_cols=202 Identities=15% Similarity=0.155 Sum_probs=100.3
Q ss_pred CceEEEEEecCCCCCCCCCCccccC-cChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCcHHH---HHHHHHhhhhhhc
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQ-PGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGFLVE---WDFFLHQITPVAS 400 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~-pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~~~~---wd~f~~~l~~l~~ 400 (639)
-.++|+..+|+|..-.......... .+....+..+++++++. +..++|.+||+......... .....+.|..+
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m-- 102 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNAL-- 102 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhc--
Confidence 4799999999997654211111111 23344555566665554 44689999999965332221 12222222222
Q ss_pred CCceEEecCCCCcCCCCCCCccCCCCCCCccccccc--cccCCCCCC--CCCCeEEEEeCCEE--EEEEeCCC--CCC--
Q 006591 401 RVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE--TYFPMPTPS--KDRPWYSIEQASVH--FTVISTEH--DWW-- 470 (639)
Q Consensus 401 ~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~--~~f~~P~~~--~~~~~Ysfd~G~v~--fi~LDT~~--~~~-- 470 (639)
. .=..++||||+++.... .. ... .+...++- ..+.-+... .-+.|.-++.++++ +|.+.+.. .+.
T Consensus 103 ~-yDa~tiGNHEFd~g~~~--l~-~~~-~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~~~~ 177 (517)
T COG0737 103 G-YDAMTLGNHEFDYGLEA--LA-RLL-DEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTWEKP 177 (517)
T ss_pred C-CcEEeecccccccCHHH--HH-HHH-hccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccccccc
Confidence 1 22568999999753210 00 000 00000000 000001111 12568889999855 45554311 111
Q ss_pred ------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccc
Q 006591 471 ------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540 (639)
Q Consensus 471 ------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Y 540 (639)
.-....+++++.+.+.......-+|++.|-+.............. ... .. .++|+++.||.|.+
T Consensus 178 ~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~~-~~~----~~-~~iD~i~~GH~H~~ 247 (517)
T COG0737 178 NAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPGD-VDV----AV-PGIDLIIGGHSHTV 247 (517)
T ss_pred cccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccccccc-ccc----cc-cCcceEeccCCccc
Confidence 112445666666666544336779999999986554311110000 000 00 34999999999974
No 81
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.70 E-value=0.00044 Score=73.45 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=26.0
Q ss_pred CCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCeEEEeCcccccc
Q 006591 489 SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYE 541 (639)
Q Consensus 489 ~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~Ye 541 (639)
.+..-+|++.|-.-+. .+ ..|.++. +||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~~~-------~d-------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS-------IE-------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc-------hH-------HHHHhcCCCCCEEEeCCCCccC
Confidence 4567799999974211 11 1344454 79999999999864
No 82
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.68 E-value=0.00015 Score=68.53 Aligned_cols=56 Identities=13% Similarity=0.129 Sum_probs=36.2
Q ss_pred HHHHHHHHH-hhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecCCCC
Q 006591 355 SVVKAMSDE-VNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHE 412 (639)
Q Consensus 355 ~~~~~l~~~-i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GNHD 412 (639)
++++++.+. -++.+.|++|.+||+.-.+....+|..+..- .....+|.|++-|||+
T Consensus 12 ~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~ 68 (150)
T cd07380 12 ALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP 68 (150)
T ss_pred HHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC
Confidence 445555442 2357899999999999654443344444432 2235789999999996
No 83
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.55 E-value=0.00015 Score=70.08 Aligned_cols=83 Identities=16% Similarity=0.252 Sum_probs=51.8
Q ss_pred EEEecCCCCCCCCCC-ccccCcC--hHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH--HHHHHHHHhhhhhhcCCceE
Q 006591 331 LAYGDMGKAPRDAST-EHYIQPG--SLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL--VEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~-~~~~~pg--~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~--~~wd~f~~~l~~l~~~vP~~ 405 (639)
++++|+|.+...... .....|. ....++++.+.+++.+||.|+++||+++..... .++... .........+|++
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~-~~~~~~~~~~~v~ 79 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEV-AFLRLLAKDVDVI 79 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHH-HHHHhccCCCeEE
Confidence 468999987532100 0011111 236778888888889999999999999654321 222221 1233334678999
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.+.||||..
T Consensus 80 ~i~GNHD~~ 88 (172)
T cd07391 80 LIRGNHDGG 88 (172)
T ss_pred EEcccCccc
Confidence 999999974
No 84
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.45 E-value=0.00028 Score=71.31 Aligned_cols=84 Identities=14% Similarity=0.163 Sum_probs=57.3
Q ss_pred eEEEEEecCCCCCCCCCCcc-ccCc--ChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEH-YIQP--GSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~-~~~p--g~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
-+.++++|.|.+........ ...| ...++++++.+.+++.+||.|+++||+.+.......|+.+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 47889999998743210000 0011 12357778888777889999999999997655435566666666554 3589
Q ss_pred EEecCCCCc
Q 006591 405 MTAIGNHER 413 (639)
Q Consensus 405 ~~v~GNHD~ 413 (639)
+.+.||||.
T Consensus 93 ~~V~GNHD~ 101 (225)
T TIGR00024 93 ILIRGNHDA 101 (225)
T ss_pred EEECCCCCC
Confidence 999999996
No 85
>PHA02239 putative protein phosphatase
Probab=97.36 E-value=0.00049 Score=69.99 Aligned_cols=69 Identities=17% Similarity=0.262 Sum_probs=45.1
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC--CCcEEEEcCCccccCCcHHHHHHHHHhhhhh-hcCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG--NVDSVFHIGDISYATGFLVEWDFFLHQITPV-ASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l-~~~vP~ 404 (639)
++++++||+|.. ...++++++.+... ..|.++++||+++.+.. +. ...+.+..+ ....++
T Consensus 1 m~~~~IsDIHG~--------------~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~-s~--~v~~~l~~~~~~~~~~ 63 (235)
T PHA02239 1 MAIYVVPDIHGE--------------YQKLLTIMDKINNERKPEETIVFLGDYVDRGKR-SK--DVVNYIFDLMSNDDNV 63 (235)
T ss_pred CeEEEEECCCCC--------------HHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCC-hH--HHHHHHHHHhhcCCCe
Confidence 478999999942 34467777776433 36999999999975432 21 222222222 234578
Q ss_pred EEecCCCCc
Q 006591 405 MTAIGNHER 413 (639)
Q Consensus 405 ~~v~GNHD~ 413 (639)
++++||||.
T Consensus 64 ~~l~GNHE~ 72 (235)
T PHA02239 64 VTLLGNHDD 72 (235)
T ss_pred EEEECCcHH
Confidence 999999996
No 86
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.33 E-value=0.0006 Score=69.66 Aligned_cols=75 Identities=15% Similarity=0.190 Sum_probs=49.7
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-----CCcEEEEcCCccccCC----c---------HHHHHHHH
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-----NVDSVFHIGDISYATG----F---------LVEWDFFL 392 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-----~pDfVl~~GDl~y~~g----~---------~~~wd~f~ 392 (639)
++++|+|.+.... ....++.+.+.+... ++|.|+++||+++... . ...++.+.
T Consensus 2 ~~iSDlHl~~~~~---------~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (243)
T cd07386 2 VFISDVHVGSKTF---------LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAA 72 (243)
T ss_pred EEecccCCCchhh---------hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHH
Confidence 6889999764210 122344555555433 5799999999996521 0 12345566
Q ss_pred HhhhhhhcCCceEEecCCCCcC
Q 006591 393 HQITPVASRVSYMTAIGNHERD 414 (639)
Q Consensus 393 ~~l~~l~~~vP~~~v~GNHD~~ 414 (639)
+.++.+...+|++.++||||..
T Consensus 73 ~~l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 73 EYLSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHHHhcccCCeEEEeCCCCCcc
Confidence 6777777789999999999973
No 87
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.27 E-value=0.00069 Score=70.50 Aligned_cols=67 Identities=19% Similarity=0.296 Sum_probs=47.1
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-cCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-NGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
++++++||+|. ....++++++.+. +.+.|.++++||+++.+... .+.++.+..+ ..++.+
T Consensus 1 M~~~vIGDIHG--------------~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s---~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 1 MATYAIGDIQG--------------CYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDS---LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred CcEEEEEccCC--------------CHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCH---HHHHHHHHhc--CCCeEE
Confidence 46899999994 3566777877764 35789999999999654332 2333333333 346889
Q ss_pred ecCCCCc
Q 006591 407 AIGNHER 413 (639)
Q Consensus 407 v~GNHD~ 413 (639)
+.||||.
T Consensus 62 VlGNHD~ 68 (275)
T PRK00166 62 VLGNHDL 68 (275)
T ss_pred EecChhH
Confidence 9999997
No 88
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.24 E-value=0.0027 Score=78.85 Aligned_cols=56 Identities=14% Similarity=0.186 Sum_probs=34.5
Q ss_pred ceEEEEEecCCCCCCCC--CCccccCcChHHHHHHHHHHhhcCCCcE-EEEcCCccccC
Q 006591 327 EMKFLAYGDMGKAPRDA--STEHYIQPGSLSVVKAMSDEVNNGNVDS-VFHIGDISYAT 382 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~--~~~~~~~pg~~~~~~~l~~~i~~~~pDf-Vl~~GDl~y~~ 382 (639)
.++|+..+|+|..-... ........+....+..+++++++.+++. ++..||+....
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs 99 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGN 99 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCC
Confidence 59999999999653211 0000112234566677777776666664 55599999654
No 89
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.17 E-value=0.0071 Score=71.58 Aligned_cols=56 Identities=16% Similarity=0.172 Sum_probs=32.6
Q ss_pred ceEEEEEecCCCCCCCCC--CccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccC
Q 006591 327 EMKFLAYGDMGKAPRDAS--TEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYAT 382 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~ 382 (639)
.++|+..+|+|..-.... .......+-...+..+++++++..+ -++|..||++...
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGS 173 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGT 173 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCC
Confidence 689999999997532110 0000111224445556666654444 4788999999543
No 90
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.14 E-value=0.001 Score=67.66 Aligned_cols=68 Identities=13% Similarity=0.178 Sum_probs=46.6
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc----------CCCcEEEEcCCccccCCcHHHHHHHHHhhhhh
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN----------GNVDSVFHIGDISYATGFLVEWDFFLHQITPV 398 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~----------~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l 398 (639)
+++++||+|. ....++++++.+.- .+.|.++++||+++.+... .+.++.+..+
T Consensus 2 ~i~vigDIHG--------------~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s---~evl~~l~~l 64 (234)
T cd07423 2 PFDIIGDVHG--------------CYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDS---PEVLRLVMSM 64 (234)
T ss_pred CeEEEEECCC--------------CHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCH---HHHHHHHHHH
Confidence 7899999994 35667778877631 1368999999999654332 2333444443
Q ss_pred hcCCceEEecCCCCc
Q 006591 399 ASRVSYMTAIGNHER 413 (639)
Q Consensus 399 ~~~vP~~~v~GNHD~ 413 (639)
...-.+..+.||||.
T Consensus 65 ~~~~~~~~v~GNHE~ 79 (234)
T cd07423 65 VAAGAALCVPGNHDN 79 (234)
T ss_pred hhCCcEEEEECCcHH
Confidence 333467899999996
No 91
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.12 E-value=0.0082 Score=70.90 Aligned_cols=56 Identities=11% Similarity=0.102 Sum_probs=33.2
Q ss_pred CceEEEEEecCCCCCCCCC--CccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCcccc
Q 006591 326 DEMKFLAYGDMGKAPRDAS--TEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYA 381 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~ 381 (639)
-.++|+..+|+|..-.... .......+....+..+++++++..+ -++|..||++..
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqG 96 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQG 96 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCC
Confidence 3699999999997642210 0001112234445666666654443 488899999954
No 92
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=97.11 E-value=0.0012 Score=65.80 Aligned_cols=65 Identities=20% Similarity=0.201 Sum_probs=45.1
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
|++++||+|.. ...++++++.+.. .++|.++++||+++.+... .+.++.+. ..+++.+
T Consensus 2 ri~~isDiHg~--------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~---~~~~~~l~----~~~~~~v 60 (207)
T cd07424 2 RDFVVGDIHGH--------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPES---LACLELLL----EPWFHAV 60 (207)
T ss_pred CEEEEECCCCC--------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH---HHHHHHHh----cCCEEEe
Confidence 68999999942 4566777776643 4699999999999754433 22333332 2468899
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
.||||..
T Consensus 61 ~GNhe~~ 67 (207)
T cd07424 61 RGNHEQM 67 (207)
T ss_pred ECCChHH
Confidence 9999963
No 93
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=97.07 E-value=0.0013 Score=67.48 Aligned_cols=69 Identities=14% Similarity=0.244 Sum_probs=45.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc---------CCCcEEEEcCCccccCCcHHHHHHHHHhhhhh
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN---------GNVDSVFHIGDISYATGFLVEWDFFLHQITPV 398 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~---------~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l 398 (639)
+|++++||+|. ....+.++++.+.- ..-|.++++||+++.+.... +.++.+..+
T Consensus 1 ~~~~vIGDIHG--------------~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~---~vl~~~~~~ 63 (245)
T PRK13625 1 MKYDIIGDIHG--------------CYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL---RMIEIVWEL 63 (245)
T ss_pred CceEEEEECcc--------------CHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChH---HHHHHHHHH
Confidence 47899999994 35667777776532 13478999999997543322 223333333
Q ss_pred hcCCceEEecCCCCc
Q 006591 399 ASRVSYMTAIGNHER 413 (639)
Q Consensus 399 ~~~vP~~~v~GNHD~ 413 (639)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 334578999999995
No 94
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=97.00 E-value=0.0017 Score=65.48 Aligned_cols=68 Identities=15% Similarity=0.199 Sum_probs=45.4
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC--------CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcC
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG--------NVDSVFHIGDISYATGFLVEWDFFLHQITPVASR 401 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--------~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~ 401 (639)
+.++||+|. ....++++++.+... ..|.++++||+++.+.... +.++.+..+...
T Consensus 1 ~~vIGDIHG--------------~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~---~vl~~l~~l~~~ 63 (222)
T cd07413 1 YDFIGDIHG--------------HAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIR---ELLEIVKSMVDA 63 (222)
T ss_pred CEEEEeccC--------------CHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHH---HHHHHHHHhhcC
Confidence 368999994 356788888776422 4689999999996544332 233333333333
Q ss_pred CceEEecCCCCcC
Q 006591 402 VSYMTAIGNHERD 414 (639)
Q Consensus 402 vP~~~v~GNHD~~ 414 (639)
-.++.+.||||..
T Consensus 64 ~~~~~l~GNHE~~ 76 (222)
T cd07413 64 GHALAVMGNHEFN 76 (222)
T ss_pred CCEEEEEccCcHH
Confidence 4688999999963
No 95
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=96.94 E-value=0.0021 Score=64.73 Aligned_cols=64 Identities=16% Similarity=0.248 Sum_probs=45.1
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-cCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-NGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
|++++||+|. ....++++++.+. ..+.|.++++||+++.+.... +.++.+. ...++.+
T Consensus 16 ri~visDiHg--------------~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~---~~l~~l~----~~~~~~v 74 (218)
T PRK09968 16 HIWVVGDIHG--------------EYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL---NVLRLLN----QPWFISV 74 (218)
T ss_pred eEEEEEeccC--------------CHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH---HHHHHHh----hCCcEEE
Confidence 9999999994 3566777777765 457899999999997544332 2222222 2246899
Q ss_pred cCCCCc
Q 006591 408 IGNHER 413 (639)
Q Consensus 408 ~GNHD~ 413 (639)
.||||.
T Consensus 75 ~GNHE~ 80 (218)
T PRK09968 75 KGNHEA 80 (218)
T ss_pred ECchHH
Confidence 999996
No 96
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=96.94 E-value=0.0021 Score=61.91 Aligned_cols=78 Identities=18% Similarity=0.166 Sum_probs=44.9
Q ss_pred EEEecCCCCCCCCCC-ccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 331 LAYGDMGKAPRDAST-EHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~-~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
.+++|+|.+...... +....+......+++.+.+.+ .++|.|+++||++.... ...+ .+.++.+ ..|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~-~~~~---~~~l~~~--~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGK-AGTE---LELLSRL--NGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCC-hHHH---HHHHHhC--CCCeEEE
Confidence 478999987642110 000001122334555555443 36899999999996543 2222 3333332 4689999
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999974
No 97
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=96.90 E-value=0.011 Score=69.04 Aligned_cols=88 Identities=11% Similarity=0.152 Sum_probs=46.4
Q ss_pred CceEEEEEecCCCCCCCCC--CccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHHHHHHHH--------Hh
Q 006591 326 DEMKFLAYGDMGKAPRDAS--TEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLVEWDFFL--------HQ 394 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~~wd~f~--------~~ 394 (639)
..++++..+|+|..-.... .......+....+..+++++++..+ -+++..||+...... ..|..+. ..
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~-~~~~~~~~~~~g~~~p~ 102 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPL-GDYMAAKGLKAGDVHPV 102 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchh-hhhhhhccccCCCcchH
Confidence 4799999999997532210 0000111234455666666654433 478889999954322 2221110 01
Q ss_pred hhhhhcCCc-eEEecCCCCcCC
Q 006591 395 ITPVASRVS-YMTAIGNHERDY 415 (639)
Q Consensus 395 l~~l~~~vP-~~~v~GNHD~~~ 415 (639)
++- +..+. =..++||||+++
T Consensus 103 i~a-mN~lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 103 YKA-MNTLDYDVGNLGNHEFNY 123 (649)
T ss_pred HHH-HHhcCCcEEeccchhhhc
Confidence 111 11222 256799999975
No 98
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=96.89 E-value=0.0028 Score=65.93 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=43.5
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc------CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCC
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN------GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRV 402 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~------~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~v 402 (639)
+++++||+|.. ...++++++.+.. ...+.++++||+++.+....+--.++..+.......
T Consensus 3 ~iyaIGDIHG~--------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~ 68 (304)
T cd07421 3 VVICVGDIHGY--------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQ 68 (304)
T ss_pred eEEEEEeccCC--------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhccccc
Confidence 68999999943 4566666665532 235689999999976544333222222222111112
Q ss_pred ceEEecCCCCc
Q 006591 403 SYMTAIGNHER 413 (639)
Q Consensus 403 P~~~v~GNHD~ 413 (639)
.++++.||||.
T Consensus 69 ~vv~LrGNHE~ 79 (304)
T cd07421 69 RHVFLCGNHDF 79 (304)
T ss_pred ceEEEecCChH
Confidence 47889999995
No 99
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=96.88 E-value=0.011 Score=68.76 Aligned_cols=88 Identities=14% Similarity=0.230 Sum_probs=44.9
Q ss_pred ceEEEEEecCCCCCCCCC--CccccCcChHHHHHHHHHHhhcCC-CcEEEEcCCccccCCcHHHHHHHH-------Hhhh
Q 006591 327 EMKFLAYGDMGKAPRDAS--TEHYIQPGSLSVVKAMSDEVNNGN-VDSVFHIGDISYATGFLVEWDFFL-------HQIT 396 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~-pDfVl~~GDl~y~~g~~~~wd~f~-------~~l~ 396 (639)
.++++..+|+|..-.... .......+....+..+++++++.. --+++..||+...... ..|.... +.+-
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~-~~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPL-GDYMAAQGLKAGQMHPVY 80 (626)
T ss_pred eEEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccc-hhhhhhccccCCCcChHH
Confidence 479999999997532210 000011122445556666655433 3578889999954332 1121110 0011
Q ss_pred hhhcCCce-EEecCCCCcCC
Q 006591 397 PVASRVSY-MTAIGNHERDY 415 (639)
Q Consensus 397 ~l~~~vP~-~~v~GNHD~~~ 415 (639)
.++..+.+ ..++||||+++
T Consensus 81 ~~mN~lgyDa~tlGNHEFd~ 100 (626)
T TIGR01390 81 KAMNLLKYDVGNLGNHEFNY 100 (626)
T ss_pred HHHhhcCccEEecccccccc
Confidence 11122222 46799999974
No 100
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=96.86 E-value=0.0023 Score=64.30 Aligned_cols=64 Identities=16% Similarity=0.131 Sum_probs=45.5
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
|++++||+|. ....++++++.+... +.|-++++||+++.+.... +.++.+. ...+..+
T Consensus 18 ri~vigDIHG--------------~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~---~vl~~l~----~~~~~~v 76 (218)
T PRK11439 18 HIWLVGDIHG--------------CFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSL---RCLQLLE----EHWVRAV 76 (218)
T ss_pred eEEEEEcccC--------------CHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHH---HHHHHHH----cCCceEe
Confidence 9999999994 356788888887543 6899999999996544332 2223222 2246789
Q ss_pred cCCCCc
Q 006591 408 IGNHER 413 (639)
Q Consensus 408 ~GNHD~ 413 (639)
.||||.
T Consensus 77 ~GNHE~ 82 (218)
T PRK11439 77 RGNHEQ 82 (218)
T ss_pred eCchHH
Confidence 999996
No 101
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=96.75 E-value=0.0032 Score=63.13 Aligned_cols=67 Identities=15% Similarity=0.131 Sum_probs=44.9
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhc-CCceEEecC
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVAS-RVSYMTAIG 409 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~-~vP~~~v~G 409 (639)
.++||+|.. ...+.++++.+.....|.++++||+++.+... .+.++.+..+.. ..+++.+.|
T Consensus 1 ~~igDiHg~--------------~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~---~~~l~~l~~~~~~~~~~~~l~G 63 (225)
T cd00144 1 YVIGDIHGC--------------LDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDS---VEVIDLLLALKILPDNVILLRG 63 (225)
T ss_pred CEEeCCCCC--------------HHHHHHHHHHhCCCCCCEEEEECCEeCCCCCc---HHHHHHHHHhcCCCCcEEEEcc
Confidence 378999942 45677777777667899999999999654322 122222222211 457899999
Q ss_pred CCCcC
Q 006591 410 NHERD 414 (639)
Q Consensus 410 NHD~~ 414 (639)
|||..
T Consensus 64 NHe~~ 68 (225)
T cd00144 64 NHEDM 68 (225)
T ss_pred Cchhh
Confidence 99974
No 102
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.66 E-value=0.0043 Score=63.95 Aligned_cols=65 Identities=20% Similarity=0.273 Sum_probs=45.3
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecC
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIG 409 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~G 409 (639)
.++||+|. ....++++++.+.. .+.|.++++||+++.+.... +.++.+..+ ...+..+.|
T Consensus 2 yvIGDIHG--------------~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~---evl~~l~~l--~~~v~~VlG 62 (257)
T cd07422 2 YAIGDIQG--------------CYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSL---ETLRFVKSL--GDSAKTVLG 62 (257)
T ss_pred EEEECCCC--------------CHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHH---HHHHHHHhc--CCCeEEEcC
Confidence 58999994 35678888887753 46899999999996543332 233444333 236789999
Q ss_pred CCCcC
Q 006591 410 NHERD 414 (639)
Q Consensus 410 NHD~~ 414 (639)
|||..
T Consensus 63 NHD~~ 67 (257)
T cd07422 63 NHDLH 67 (257)
T ss_pred CchHH
Confidence 99973
No 103
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=96.62 E-value=0.31 Score=49.20 Aligned_cols=178 Identities=18% Similarity=0.151 Sum_probs=98.9
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+|++++||+=.. +|...+.+.|-....+.++||||..|-++ +.|..--|+.+.+.++. .+- +.+
T Consensus 1 mriLfiGDvvGk-----------~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~d-viT 64 (266)
T COG1692 1 MRILFIGDVVGK-----------PGRKAVKEHLPQLKSKYKIDFVIVNGENA-AGGFGITEKIYKELLEA---GAD-VIT 64 (266)
T ss_pred CeEEEEecccCc-----------chHHHHHHHhHHHHHhhcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCC-EEe
Confidence 589999997522 34444444443333457899999999999 56665556666665543 444 467
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC--CCCC-CHHHHHHHHHHHh
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH--DWWL-NSEQYKWIQKDLA 484 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~--~~~~-g~~Q~~WL~~~La 484 (639)
.|||=++....-+ |-.. ....-+-.+.|....+..|+-|...+..+.+++-.- .... -..-..=+++.|.
T Consensus 65 ~GNH~wd~~ei~~-~i~~------~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~ 137 (266)
T COG1692 65 LGNHTWDQKEILD-FIDN------ADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLD 137 (266)
T ss_pred cccccccchHHHH-Hhhc------ccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHH
Confidence 9999875321100 0000 000111122343344566888888777776666421 1110 1122333556666
Q ss_pred hccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 485 SVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 485 ~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
+.+ .+++.+||-+|.--.+... . .-.+-+-+|.+|+.=|+|.-.
T Consensus 138 ~~~-~~~~~iiVDFHAEtTSEK~-----------a-~g~yldGrvsavvGTHTHV~T 181 (266)
T COG1692 138 EIK-LGTDLIIVDFHAETTSEKN-----------A-FGWYLDGRVSAVVGTHTHVPT 181 (266)
T ss_pred hCc-cCCceEEEEccccchhhhh-----------h-hheEEcCeEEEEEeccCcccc
Confidence 543 4557799989965432221 1 111224468899999999743
No 104
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.61 E-value=0.035 Score=57.12 Aligned_cols=134 Identities=13% Similarity=0.142 Sum_probs=77.5
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-----------cCCCcEEEEcCCccccCCc--------------
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-----------NGNVDSVFHIGDISYATGF-------------- 384 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-----------~~~pDfVl~~GDl~y~~g~-------------- 384 (639)
+++++|+|.+.... ....++.+.+.+. ..++.-++++||.+...+.
T Consensus 2 i~~vSgL~ig~~~~---------~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~ 72 (257)
T cd07387 2 IALVSGLGLGGNAE---------SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKK 72 (257)
T ss_pred EEEEcccccCCCcc---------chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccc
Confidence 68899999875421 1223344444432 2345679999999965432
Q ss_pred -----HHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCcccccc-ccccCCCC-----CCCCCCeEEE
Q 006591 385 -----LVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPY-ETYFPMPT-----PSKDRPWYSI 453 (639)
Q Consensus 385 -----~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y-~~~f~~P~-----~~~~~~~Ysf 453 (639)
..+.+++-..+..+.+.+|+...|||||-... ..| +.++ +..|+.-. ....+. |.|
T Consensus 73 ~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~------~lP------Qqplh~~lfp~s~~~~~~~~vtNP-~~~ 139 (257)
T cd07387 73 SSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANH------SLP------QQPLHRCLFPKSSNYSTLNLVTNP-YEF 139 (257)
T ss_pred cchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccc------cCC------CCCCCHHHhhcccccCCcEEeCCC-eEE
Confidence 22344555666777789999999999996311 011 1122 11221110 001233 469
Q ss_pred EeCCEEEEEEeCCC-----CCCCCHHHHHHHHHHHhh
Q 006591 454 EQASVHFTVISTEH-----DWWLNSEQYKWIQKDLAS 485 (639)
Q Consensus 454 d~G~v~fi~LDT~~-----~~~~g~~Q~~WL~~~La~ 485 (639)
++++++|++.+... .+...+.-++.|+..|+-
T Consensus 140 ~i~g~~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 140 SIDGVRVLGTSGQNVDDILKYSSLESRLDILERTLKW 176 (257)
T ss_pred EECCEEEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh
Confidence 99999999987653 123344456778888873
No 105
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.59 E-value=0.05 Score=59.76 Aligned_cols=84 Identities=14% Similarity=0.280 Sum_probs=56.3
Q ss_pred CCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-----cCCCcEEEEcCCccccCC-------------
Q 006591 322 AGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-----NGNVDSVFHIGDISYATG------------- 383 (639)
Q Consensus 322 ~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-----~~~pDfVl~~GDl~y~~g------------- 383 (639)
.++.+.+++++++|.|.+... + ....+..+++.+. +.+...++.+||+++.-|
T Consensus 220 ~~~~e~v~v~~isDih~GSk~-----F----~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~d 290 (481)
T COG1311 220 NTGDERVYVALISDIHRGSKE-----F----LEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIAD 290 (481)
T ss_pred CCCCcceEEEEEeeeecccHH-----H----HHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCccccccccc
Confidence 344467999999999986421 1 1233444444442 234578999999996432
Q ss_pred cHHHHHHHHHhhhhhhcCCceEEecCCCCcC
Q 006591 384 FLVEWDFFLHQITPVASRVSYMTAIGNHERD 414 (639)
Q Consensus 384 ~~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~ 414 (639)
...|++++.+.+..+-..+.+++.|||||..
T Consensus 291 i~~qy~~~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 291 IYEQYEELAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred chHHHHHHHHHHhhCCCCceEEEecCCCCcc
Confidence 1235667777777777788899999999974
No 106
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.52 E-value=0.064 Score=50.26 Aligned_cols=79 Identities=18% Similarity=0.246 Sum_probs=42.3
Q ss_pred EEEEEecCCCCCCCC-CCccccCcCh--HHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 329 KFLAYGDMGKAPRDA-STEHYIQPGS--LSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~-~~~~~~~pg~--~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
.+-++||+|.+...- +...+.++.. ..++....+.+ ..-|.+.|+||++...... ......++.+..+ ..
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv--~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGr--kh 77 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTV--GPDDVLWHLGDLSSGANRE---RAAGLILERLNGR--KH 77 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcC--CccceEEEecccccccchh---hHHHHHHHHcCCc--EE
Confidence 456779999865321 1112222211 12222222222 3457899999999554432 2334455555333 38
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.++||||-.
T Consensus 78 lv~GNhDk~ 86 (186)
T COG4186 78 LVPGNHDKC 86 (186)
T ss_pred EeeCCCCCC
Confidence 899999963
No 107
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=96.49 E-value=0.0068 Score=62.91 Aligned_cols=66 Identities=18% Similarity=0.280 Sum_probs=45.4
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-cCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-NGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+..++||+|. ....++++++++. +...|-++++||+++.+....+ .++.+..+ ...+..+
T Consensus 2 ~~YvIGDIHG--------------c~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sle---vL~~l~~l--~~~~~~V 62 (279)
T TIGR00668 2 ATYLIGDLHG--------------CYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLE---VLRYVKSL--GDAVRLV 62 (279)
T ss_pred cEEEEEcccC--------------CHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHH---HHHHHHhc--CCCeEEE
Confidence 5689999994 4567888888876 3467999999999976543322 22333332 1235689
Q ss_pred cCCCCc
Q 006591 408 IGNHER 413 (639)
Q Consensus 408 ~GNHD~ 413 (639)
.||||.
T Consensus 63 lGNHD~ 68 (279)
T TIGR00668 63 LGNHDL 68 (279)
T ss_pred EChhHH
Confidence 999996
No 108
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=96.41 E-value=0.032 Score=58.66 Aligned_cols=173 Identities=21% Similarity=0.219 Sum_probs=92.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHH--HHhhcCCCcEEEEcCCccccCCc--------HHHHH---HHHHh
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMS--DEVNNGNVDSVFHIGDISYATGF--------LVEWD---FFLHQ 394 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~--~~i~~~~pDfVl~~GDl~y~~g~--------~~~wd---~f~~~ 394 (639)
+|+++-|+.|..- .++.+.+. +..-..++|++|..||+---+.. ...+. .|++.
T Consensus 1 MrIaVqGCcHG~L-------------d~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~Y 67 (456)
T KOG2863|consen 1 MRIAVQGCCHGEL-------------DNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKY 67 (456)
T ss_pred CceeeecccchhH-------------HHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHH
Confidence 5889999998421 11222221 11123589999999999633211 11222 34443
Q ss_pred hh-hhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCC--CCCCeE-----EEEeCCEEEEEEeCC
Q 006591 395 IT-PVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPS--KDRPWY-----SIEQASVHFTVISTE 466 (639)
Q Consensus 395 l~-~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~--~~~~~Y-----sfd~G~v~fi~LDT~ 466 (639)
.. ...+.+|.+++=||||... |.. -+|..+ ..+.|| ...+|++|+-.|+.-
T Consensus 68 Ysge~~APVlTIFIGGNHEAsn-------------------yL~--eLpyGGwVApNIyYlG~agVv~~~gvRIggiSGI 126 (456)
T KOG2863|consen 68 YSGEIKAPVLTIFIGGNHEASN-------------------YLQ--ELPYGGWVAPNIYYLGYAGVVNFGGVRIGGISGI 126 (456)
T ss_pred hCCcccCceeEEEecCchHHHH-------------------HHH--hcccCceeccceEEeeecceEEECCEEEeeccch
Confidence 32 2346788999999999631 111 112111 123444 367899999888752
Q ss_pred ---CCCCCC-----------------HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCc-----hhHHH-----
Q 006591 467 ---HDWWLN-----------------SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLS-----VDKFF----- 516 (639)
Q Consensus 467 ---~~~~~g-----------------~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~-----~~~~~----- 516 (639)
+++..| -.+.+ ...|.+. +.|--|++.|.-+..-...... ..+-+
T Consensus 127 ~k~~dy~kgh~E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie 201 (456)
T KOG2863|consen 127 YKEHDYRKGHFEWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIE 201 (456)
T ss_pred hhhhhcccCCCCCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHh
Confidence 232211 11111 1223332 3455688899655322210000 00111
Q ss_pred -----HHHHHHHHHhCCCeEEEeCcccc
Q 006591 517 -----VKSVEPLLLKNKVDLVLFGHVHN 539 (639)
Q Consensus 517 -----r~~l~~Ll~~y~VdlvlsGH~H~ 539 (639)
...++.||++.+....|+.|.|.
T Consensus 202 ~~~LGSp~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 202 EGKLGSPALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred cCCcCChHHHHHHHHhCcchhhhhhHhh
Confidence 24678899999999999999997
No 109
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=96.32 E-value=0.065 Score=54.51 Aligned_cols=88 Identities=18% Similarity=0.171 Sum_probs=49.6
Q ss_pred CeEEEEeCCE--EEEEEeCCCCCC----------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHH
Q 006591 449 PWYSIEQASV--HFTVISTEHDWW----------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFF 516 (639)
Q Consensus 449 ~~Ysfd~G~v--~fi~LDT~~~~~----------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~ 516 (639)
.+..++.+++ .|+.+.+..... ....-.+-+++.++++++ +...+|++.|-..-... .+. ..
T Consensus 122 ~~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~--~p~---~~ 195 (239)
T cd07381 122 RPAILEVNGIKVAFLAYTYGTNGIPLAAGARPGGVNPLDLERIAADIAEAKK-KADIVIVSLHWGVEYSY--YPT---PE 195 (239)
T ss_pred CcEEEEECCEEEEEEEEECCCCCCcCcccCCccccCccCHHHHHHHHHHHhh-cCCEEEEEecCcccCCC--CCC---HH
Confidence 4556778774 455554432110 011112345555655533 37889999997552211 111 12
Q ss_pred HHHHHHHHHhCCCeEEEeCcccccce
Q 006591 517 VKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 517 r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
...+...+.+.++|+++.||.|..+-
T Consensus 196 ~~~la~~l~~~G~D~IiG~H~Hv~q~ 221 (239)
T cd07381 196 QRELARALIDAGADLVIGHHPHVLQG 221 (239)
T ss_pred HHHHHHHHHHCCCCEEEcCCCCcCCC
Confidence 33455555567999999999998764
No 110
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=95.81 E-value=0.22 Score=50.69 Aligned_cols=60 Identities=18% Similarity=0.137 Sum_probs=37.2
Q ss_pred HHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 478 WIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 478 WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
-+++.+++++ .+...+|++.|-..-... .+. .. ...+..-+.+.++|+++.||.|..+..
T Consensus 161 ~i~~~i~~lr-~~~D~vIv~~H~G~e~~~--~p~--~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 161 KILADIARAR-KKADVVIVSLHWGVEYQY--EPT--DE-QRELAHALIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHHh-ccCCEEEEEecCccccCC--CCC--HH-HHHHHHHHHHcCCCEEEcCCCCcCCce
Confidence 3455555543 357889999997763221 111 12 234444454578999999999987743
No 111
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.80 E-value=0.018 Score=57.99 Aligned_cols=86 Identities=13% Similarity=0.160 Sum_probs=54.0
Q ss_pred eEEEEEecCCCCCCCCCCcc--ccCc-ChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc--HHHHHHHHHhhhhhhcCC
Q 006591 328 MKFLAYGDMGKAPRDASTEH--YIQP-GSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF--LVEWDFFLHQITPVASRV 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~--~~~p-g~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~--~~~wd~f~~~l~~l~~~v 402 (639)
-+.++++|.|.+....-.+. +..+ ....+.+.+.+.+...+|+-++.+||+-.+-+. ..+|+.....++.+..+
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~- 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER- 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC-
Confidence 48899999998743211010 1111 123455555556778999999999999877654 34455444444433323
Q ss_pred ceEEecCCCCcC
Q 006591 403 SYMTAIGNHERD 414 (639)
Q Consensus 403 P~~~v~GNHD~~ 414 (639)
-++.+.||||-.
T Consensus 99 evi~i~GNHD~~ 110 (235)
T COG1407 99 EVIIIRGNHDNG 110 (235)
T ss_pred cEEEEeccCCCc
Confidence 599999999964
No 112
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=95.68 E-value=0.041 Score=60.72 Aligned_cols=55 Identities=13% Similarity=0.170 Sum_probs=43.1
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT 382 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~ 382 (639)
+.+||++..|.|.+.... .......+..+++.|+..+++.++|+||..||+...+
T Consensus 12 ntirILVaTD~HlGY~Ek--D~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEK--DAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred cceEEEEeecCccccccC--CcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 579999999999865321 1122334678899999999999999999999999765
No 113
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=95.42 E-value=0.028 Score=57.31 Aligned_cols=168 Identities=16% Similarity=0.135 Sum_probs=93.9
Q ss_pred CcEEEEcCCccccCCcH-------HHHHHHHH----hhhhhhcCCceEEecCCCCcCCCCCC---CccCCCCCCCccccc
Q 006591 369 VDSVFHIGDISYATGFL-------VEWDFFLH----QITPVASRVSYMTAIGNHERDYVNSG---SVYSTPDSGGECGIP 434 (639)
Q Consensus 369 pDfVl~~GDl~y~~g~~-------~~wd~f~~----~l~~l~~~vP~~~v~GNHD~~~~~~~---~~y~~~dsgge~~~~ 434 (639)
|=-++..||++++.+-. .++.+|.. ...++...+|+|+-.||||.+-.+.. ..|. .| ...
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyR-----rE-lrd 200 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYR-----RE-LRD 200 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHH-----HH-HHH
Confidence 33467778999775421 12222221 12233346899999999998743321 0110 00 011
Q ss_pred ccc-------ccC--CCCC--CCCCCeEEEEeCCEEEEEEeCCCCCC-C-CHHHHHHHHHHHhhccCCCCCeEEEEeccC
Q 006591 435 YET-------YFP--MPTP--SKDRPWYSIEQASVHFTVISTEHDWW-L-NSEQYKWIQKDLASVDRSKTPWLIFAGHRP 501 (639)
Q Consensus 435 y~~-------~f~--~P~~--~~~~~~Ysfd~G~v~fi~LDT~~~~~-~-g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P 501 (639)
|-. .|. .|.. ...+.-||+++|++|.+-+.+...-. . ...-+-||+.+|........| ++++.|.-
T Consensus 201 yve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyG 279 (392)
T COG5555 201 YVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYG 279 (392)
T ss_pred HHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhC
Confidence 111 111 1111 12345789999999988776542110 1 122356999999875444444 88888976
Q ss_pred Cc--cCCCCCC--------------chhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 502 MY--SSLDGFL--------------SVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 502 ~y--~~~~~~~--------------~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
.- ++..+.+ -.....+..|...++-|+|...+.||.|.....
T Consensus 280 wdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~ma 337 (392)
T COG5555 280 WDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMA 337 (392)
T ss_pred ccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEecccccccccee
Confidence 52 2211100 001123678888999999999999999986443
No 114
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=95.13 E-value=0.43 Score=48.63 Aligned_cols=164 Identities=18% Similarity=0.150 Sum_probs=78.7
Q ss_pred cChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCc
Q 006591 351 PGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGE 430 (639)
Q Consensus 351 pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge 430 (639)
||...+.+.|-+..++.++|||+..|.++ +.|.---.+.+.++++ ..+-+ .+.|||=++...- +..-+.
T Consensus 10 ~Gr~~v~~~Lp~L~~~~~~DfVIaNgENa-a~G~Git~~~~~~L~~---~GvDv-iT~GNH~wdkkei---~~~i~~--- 78 (253)
T PF13277_consen 10 PGRRAVKEHLPELKEEYGIDFVIANGENA-AGGFGITPKIAEELFK---AGVDV-ITMGNHIWDKKEI---FDFIDK--- 78 (253)
T ss_dssp HHHHHHHHHHHHHGG--G-SEEEEE-TTT-TTTSS--HHHHHHHHH---HT-SE-EE--TTTTSSTTH---HHHHHH---
T ss_pred HHHHHHHHHHHHHHhhcCCCEEEECCccc-CCCCCCCHHHHHHHHh---cCCCE-EecCcccccCcHH---HHHHhc---
Confidence 34434444443334567999999999999 4554322233333222 24544 6789998763211 000000
Q ss_pred cccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCC
Q 006591 431 CGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTE--HDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDG 508 (639)
Q Consensus 431 ~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~--~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~ 508 (639)
....-+-.++|...++..|..++.++.++.+++-. .....-..-..-+++.|++. +.+.+.+||=+|.=.-
T Consensus 79 -~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEaT----- 151 (253)
T PF13277_consen 79 -EPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEAT----- 151 (253)
T ss_dssp --SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S-H-----
T ss_pred -CCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCcH-----
Confidence 00011112345445567899999999888888753 21111112344455555554 3567889998885321
Q ss_pred CCchhHHHHHHHHHHHHhCCCeEEEeCcccc
Q 006591 509 FLSVDKFFVKSVEPLLLKNKVDLVLFGHVHN 539 (639)
Q Consensus 509 ~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~ 539 (639)
. .+.-.-.+-+-+|.+|+.-|+|.
T Consensus 152 ------S-EK~A~g~~lDGrvsaV~GTHTHV 175 (253)
T PF13277_consen 152 ------S-EKQAMGWYLDGRVSAVVGTHTHV 175 (253)
T ss_dssp ------H-HHHHHHHHHBTTBSEEEEESSSS
T ss_pred ------H-HHHHHHHHhCCcEEEEEeCCCCc
Confidence 1 12223345567899999999997
No 115
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=95.01 E-value=0.075 Score=55.33 Aligned_cols=69 Identities=16% Similarity=0.146 Sum_probs=44.6
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhh--hcCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPV--ASRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l--~~~vP~~~ 406 (639)
+++++||+|.. ...+.++.+.+.....+-++++||+++.+....+ .+..+..+ .....++.
T Consensus 29 ~i~vvGDiHG~--------------~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e---~l~~l~~lk~~~p~~v~l 91 (271)
T smart00156 29 PVTVCGDIHGQ--------------FDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIE---VILLLFALKILYPNRVVL 91 (271)
T ss_pred CEEEEEeCcCC--------------HHHHHHHHHHcCCCCCceEEEeCCccCCCCChHH---HHHHHHHHHhcCCCCEEE
Confidence 68999999943 4556666666555667889999999965433221 12222111 12335789
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 92 lrGNHE~~ 99 (271)
T smart00156 92 LRGNHESR 99 (271)
T ss_pred EeccccHH
Confidence 99999974
No 116
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=94.90 E-value=0.28 Score=40.25 Aligned_cols=69 Identities=28% Similarity=0.418 Sum_probs=41.8
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC-----CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK-----EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~-----~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
+|..+++... ..+++.|+|..... ..-.|+|........ ...... + +-.+.+
T Consensus 2 ~P~~l~v~~~--~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~----------~---------~~~~~~ 58 (85)
T PF00041_consen 2 APENLSVSNI--SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD--WQEVTV----------P---------GNETSY 58 (85)
T ss_dssp SSEEEEEEEE--CSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE--EEEEEE----------E---------TTSSEE
T ss_pred cCcCeEEEEC--CCCEEEEEEECCCCCCCCeeEEEEEEEeccccee--eeeeee----------e---------eeeeee
Confidence 3555666654 35899999998741 123777764433221 111110 0 111267
Q ss_pred EecCCCCCcEEEEEEcc
Q 006591 290 VMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~ 306 (639)
+++||+|+|+|.++|..
T Consensus 59 ~i~~L~p~t~Y~~~v~a 75 (85)
T PF00041_consen 59 TITGLQPGTTYEFRVRA 75 (85)
T ss_dssp EEESCCTTSEEEEEEEE
T ss_pred eeccCCCCCEEEEEEEE
Confidence 89999999999999975
No 117
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=94.68 E-value=0.43 Score=48.94 Aligned_cols=63 Identities=14% Similarity=0.176 Sum_probs=43.5
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 475 QYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 475 Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
+.+.+.+++++++ ++..++||+.|--.-... .+ .+. ..++...+-+.++|+|+.+|.|..+-.
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~--~p--~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~ 231 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN--YP--TPE-QRELARALIDAGADIIIGHHPHVIQPV 231 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC--CC--CHH-HHHHHHHHHHcCCCEEEeCCCCcccce
Confidence 4578888888875 678899999997542111 11 123 344555556689999999999997754
No 118
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=94.51 E-value=0.12 Score=54.75 Aligned_cols=69 Identities=13% Similarity=0.091 Sum_probs=43.6
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~~ 406 (639)
+++++||+|.. ...+.++.+.......+-++++||+++.+.... +.+..+..+. ...-++.
T Consensus 44 ~i~ViGDIHG~--------------~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~---Evi~lL~~lki~~p~~v~l 106 (305)
T cd07416 44 PVTVCGDIHGQ--------------FYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSI---ECVLYLWALKILYPKTLFL 106 (305)
T ss_pred CEEEEEeCCCC--------------HHHHHHHHHhcCCCCCceEEEECCccCCCCChH---HHHHHHHHHHhhcCCCEEE
Confidence 68999999943 445666666554455688999999996543322 1222222221 1235789
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 107 LRGNHE~~ 114 (305)
T cd07416 107 LRGNHECR 114 (305)
T ss_pred EeCCCcHH
Confidence 99999974
No 119
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=94.30 E-value=0.13 Score=54.04 Aligned_cols=69 Identities=14% Similarity=0.099 Sum_probs=43.1
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~~ 406 (639)
.++++||+|.. ...+.++.+.......+-++++||+++.+....+ .+..+..+. ....++.
T Consensus 43 ~i~vvGDIHG~--------------~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~e---vl~ll~~lk~~~p~~v~l 105 (285)
T cd07415 43 PVTVCGDIHGQ--------------FYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSVE---TFLLLLALKVRYPDRITL 105 (285)
T ss_pred CEEEEEeCCCC--------------HHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHHH---HHHHHHHHhhcCCCcEEE
Confidence 48899999942 4456666665544456789999999965433221 122222221 2345899
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 106 lrGNHE~~ 113 (285)
T cd07415 106 LRGNHESR 113 (285)
T ss_pred EecccchH
Confidence 99999974
No 120
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=94.26 E-value=0.12 Score=55.08 Aligned_cols=69 Identities=16% Similarity=0.064 Sum_probs=41.9
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYM 405 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~ 405 (639)
+++++||+|. ....+.++.+...-. .-+.++++||+++.+....+ .+..+-.+. ..-.++
T Consensus 52 ~~~vvGDiHG--------------~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~E---vl~ll~~lk~~~p~~v~ 114 (321)
T cd07420 52 QVTICGDLHG--------------KLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSIE---ILIILFAFFLVYPNEVH 114 (321)
T ss_pred CeEEEEeCCC--------------CHHHHHHHHHHcCCCCccceEEEeccccCCCCCcHH---HHHHHHHHhhcCCCcEE
Confidence 7899999994 345566666554222 23679999999975433221 112121111 123488
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.+.||||..
T Consensus 115 llRGNHE~~ 123 (321)
T cd07420 115 LNRGNHEDH 123 (321)
T ss_pred EecCchhhh
Confidence 899999974
No 121
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=94.19 E-value=1 Score=46.28 Aligned_cols=69 Identities=20% Similarity=0.283 Sum_probs=44.8
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+-.||+.++|.|.-..+ +. + -..-|+++|+||... .|...+-..|.+.+..+--.. =+
T Consensus 60 ~~~r~VcisdtH~~~~~-----------------i~-~--~p~gDvlihagdfT~-~g~~~ev~~fn~~~gslph~y-KI 117 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD-----------------IN-D--IPDGDVLIHAGDFTN-LGLPEEVIKFNEWLGSLPHEY-KI 117 (305)
T ss_pred CceEEEEecCcccccCc-----------------cc-c--CCCCceEEeccCCcc-ccCHHHHHhhhHHhccCccee-eE
Confidence 56899999999954321 11 1 256789999999994 455555455666554432111 26
Q ss_pred EecCCCCcCCC
Q 006591 406 TAIGNHERDYV 416 (639)
Q Consensus 406 ~v~GNHD~~~~ 416 (639)
++.||||...+
T Consensus 118 VIaGNHELtFd 128 (305)
T KOG3947|consen 118 VIAGNHELTFD 128 (305)
T ss_pred EEeeccceeec
Confidence 78999998644
No 122
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=93.90 E-value=0.15 Score=53.57 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=43.2
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
.++++||+|. ....+.++.+.......+-++++||+++.+....+-=.+.-.++ +.....++.+.
T Consensus 51 ~i~viGDIHG--------------~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk-~~~p~~i~llr 115 (293)
T cd07414 51 PLKICGDIHG--------------QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK-IKYPENFFLLR 115 (293)
T ss_pred ceEEEEecCC--------------CHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHHHhh-hhCCCcEEEEe
Confidence 5899999994 24556666666544556789999999965433222111111111 11123478899
Q ss_pred CCCCcC
Q 006591 409 GNHERD 414 (639)
Q Consensus 409 GNHD~~ 414 (639)
||||..
T Consensus 116 GNHE~~ 121 (293)
T cd07414 116 GNHECA 121 (293)
T ss_pred cccchh
Confidence 999974
No 123
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=93.79 E-value=0.16 Score=55.11 Aligned_cols=70 Identities=14% Similarity=0.063 Sum_probs=42.4
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~ 404 (639)
-++.++||+|.. ...+.++.+.+.-... +.++++||+++.+.... +.+..+..+. ...-+
T Consensus 66 ~~i~VvGDIHG~--------------~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~Sl---Evl~lL~~lki~~p~~v 128 (377)
T cd07418 66 CEVVVVGDVHGQ--------------LHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGL---ETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CCEEEEEecCCC--------------HHHHHHHHHHhCCCCCCceEEEeccccCCCCChH---HHHHHHHHHhhccCCeE
Confidence 468999999953 4556666665432223 45999999996543322 1122222221 23357
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
+.+.||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8999999975
No 124
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=93.72 E-value=0.14 Score=53.92 Aligned_cols=68 Identities=13% Similarity=0.069 Sum_probs=42.0
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhh--hhcCCceEEe
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITP--VASRVSYMTA 407 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~--l~~~vP~~~v 407 (639)
+.++||+|.. ...+.++.+.+.....+-++++||+++.+.... +....+-. +.....++.+
T Consensus 54 ~~ViGDIHG~--------------~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~---evl~ll~~lk~~~p~~v~ll 116 (294)
T PTZ00244 54 VRVCGDTHGQ--------------YYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSV---ETITLQFCYKIVYPENFFLL 116 (294)
T ss_pred ceeeccCCCC--------------HHHHHHHHHHcCCCCcccEEEeeeEecCCCCHH---HHHHHHHHHhhccCCeEEEE
Confidence 7889999943 455666666654445557889999996543222 11111111 1124468999
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
.||||..
T Consensus 117 rGNHE~~ 123 (294)
T PTZ00244 117 RGNHECA 123 (294)
T ss_pred ecccchH
Confidence 9999974
No 125
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.57 E-value=0.7 Score=43.09 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=55.1
Q ss_pred HHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccc
Q 006591 518 KSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSL 597 (639)
Q Consensus 518 ~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~ 597 (639)
+.|.-|-++.+||+.++||+|..+-... +|-.+|--|++-...... .
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye~-------------------------eg~ffvnPGSaTGAfn~~--------~ 143 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYEH-------------------------EGKFFVNPGSATGAFNVS--------D 143 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEEe-------------------------CCcEEeCCCcccCCCccc--------c
Confidence 4566677788999999999999775421 233556566653321110 0
Q ss_pred eecccccEEEEEEeCCEEEEEEEECCCCeE-EEEEEEEe
Q 006591 598 SRVAKFGYLRGHATKQEIQLEFVNADTRKV-EDSFRIIR 635 (639)
Q Consensus 598 ~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v-~D~f~I~k 635 (639)
.......|+.+.+.++.+....+..-+|+| +|.....|
T Consensus 144 t~~~~PSFvLmDiqg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 144 TDIIVPSFVLMDIQGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred cCCCCCceEEEEecCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 001245799999998888877777778886 56665554
No 126
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=93.50 E-value=0.69 Score=53.83 Aligned_cols=81 Identities=25% Similarity=0.465 Sum_probs=51.8
Q ss_pred EEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCC
Q 006591 220 HLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGL 294 (639)
Q Consensus 220 ~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL 294 (639)
++-......++++|.|.-.+... -.|+|-+++.... +|..-. + -..+++++||
T Consensus 448 ~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e~----~~~~~~-------t-----------~~~~~ti~gL 505 (996)
T KOG0196|consen 448 VLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDER----SYSTLK-------T-----------KTTTATITGL 505 (996)
T ss_pred eEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccccc----ceeEEe-------c-----------ccceEEeecc
Confidence 33344445689999999665533 3666765443211 121110 1 1237899999
Q ss_pred CCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 295 QPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 295 ~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
+|||.|.+||..-. ...|....|+|.|.
T Consensus 506 ~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 506 KPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred CCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 99999999997532 24788899999875
No 127
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=93.22 E-value=0.26 Score=52.05 Aligned_cols=69 Identities=17% Similarity=0.073 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~~ 406 (639)
.++++||+|.. ...+.++.+.+.....+-++++||+++.+.... +.+..+-.+. ...-++.
T Consensus 44 ~i~vvGDIHG~--------------~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~---evl~ll~~lk~~~p~~v~l 106 (303)
T PTZ00239 44 PVNVCGDIHGQ--------------FYDLQALFKEGGDIPNANYIFIGDFVDRGYNSV---ETMEYLLCLKVKYPGNITL 106 (303)
T ss_pred CEEEEEeCCCC--------------HHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHH---HHHHHHHHhhhcCCCcEEE
Confidence 48899999943 455666666554445677999999996543322 1122221111 1234789
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 107 lrGNHE~~ 114 (303)
T PTZ00239 107 LRGNHESR 114 (303)
T ss_pred EecccchH
Confidence 99999974
No 128
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=93.06 E-value=0.23 Score=52.79 Aligned_cols=69 Identities=12% Similarity=0.044 Sum_probs=42.3
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~~ 406 (639)
.++++||+|.. ...+.++.+.......+-++++||+++.+.... +.+..+..+. ....++.
T Consensus 60 ~i~vvGDIHG~--------------~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~---evl~ll~~lki~~p~~v~l 122 (320)
T PTZ00480 60 PLKICGDVHGQ--------------YFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSL---ETICLLLAYKIKYPENFFL 122 (320)
T ss_pred CeEEEeecccC--------------HHHHHHHHHhcCCCCcceEEEeceecCCCCCcH---HHHHHHHHhcccCCCceEE
Confidence 58999999942 345556666544445567889999996543221 1112221211 1235789
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 123 lRGNHE~~ 130 (320)
T PTZ00480 123 LRGNHECA 130 (320)
T ss_pred Eecccchh
Confidence 99999974
No 129
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=92.91 E-value=0.41 Score=53.93 Aligned_cols=55 Identities=25% Similarity=0.348 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-C-CCeE-EEeCcccc
Q 006591 473 SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-N-KVDL-VLFGHVHN 539 (639)
Q Consensus 473 ~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y-~Vdl-vlsGH~H~ 539 (639)
-.|.+|-.+.++. ....-+|+++|.|.-... + ++.+...+++ + ++++ ||-||.|.
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~--------e-~~~~~~~ir~~~p~t~IqviGGHshi 268 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDD--------E-WKSLHAEIRKVHPNTPIQVIGGHSHI 268 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccch--------h-hhhHHHHHhhhCCCCceEEECchhhh
Confidence 4567787777775 456668899998863221 1 2223333444 3 7788 99999998
No 130
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=92.03 E-value=0.4 Score=50.98 Aligned_cols=70 Identities=19% Similarity=0.198 Sum_probs=41.1
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhh--hcCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPV--ASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l--~~~vP~ 404 (639)
-++.++||+|. ....+.++.+...- ..-|-++++||+++.+....+ .+..+-.+ ....-+
T Consensus 60 ~~~~VvGDIHG--------------~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~E---vl~ll~~lki~~p~~v 122 (316)
T cd07417 60 EKITVCGDTHG--------------QFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVE---VILTLFAFKLLYPNHF 122 (316)
T ss_pred ceeEEeecccC--------------CHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHH---HHHHHHHhhhccCCce
Confidence 47999999994 24455666654422 123579999999965433221 11111111 123347
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
+.+.||||..
T Consensus 123 ~lLRGNHE~~ 132 (316)
T cd07417 123 HLNRGNHETD 132 (316)
T ss_pred EEEeeccchH
Confidence 8899999973
No 131
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=91.64 E-value=0.57 Score=49.78 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCeEEEeCcc
Q 006591 517 VKSVEPLLLKNKVDLVLFGHV 537 (639)
Q Consensus 517 r~~l~~Ll~~y~VdlvlsGH~ 537 (639)
.+.+...++++++++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 567889999999999999998
No 132
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=90.48 E-value=0.4 Score=47.53 Aligned_cols=76 Identities=8% Similarity=0.074 Sum_probs=46.2
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-cCCCcEEEEcCCccccCCcHH---------HH-H----HHHHh
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-NGNVDSVFHIGDISYATGFLV---------EW-D----FFLHQ 394 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfVl~~GDl~y~~g~~~---------~w-d----~f~~~ 394 (639)
|++++|.+.+... ...+.++.+++.+. +.+|+.++++|++++...... .. . .+.+.
T Consensus 1 Iv~~Sg~~~~~~~---------~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (209)
T PF04042_consen 1 IVFASGPFLDSDN---------LSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSF 71 (209)
T ss_dssp EEEEES--CTTT----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHH
T ss_pred CEEEecCccCCCH---------hHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHH
Confidence 5788888876321 23566777777666 788999999999997543211 11 1 12233
Q ss_pred hhhhhcCCceEEecCCCCcC
Q 006591 395 ITPVASRVSYMTAIGNHERD 414 (639)
Q Consensus 395 l~~l~~~vP~~~v~GNHD~~ 414 (639)
++.+...++++.++|+||..
T Consensus 72 ~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 72 LESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HCCCHCCSEEEEE--TTCTT
T ss_pred HhhcccccEEEEeCCCcccc
Confidence 44455688999999999974
No 133
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=77.72 E-value=12 Score=28.69 Aligned_cols=22 Identities=23% Similarity=0.456 Sum_probs=18.6
Q ss_pred EEEEEecCCCCCcEEEEEEccC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSE 307 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~ 307 (639)
-+...+.+|+|++.|.++|..-
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 3578899999999999998653
No 134
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].
Probab=76.54 E-value=18 Score=41.10 Aligned_cols=102 Identities=19% Similarity=0.291 Sum_probs=60.8
Q ss_pred CCCCEEEEEEeccC--CCCCCCEEEEEcCCCCCCCCCCcCCccccccCCCCCCCccccccceeEEccCCccccccccccc
Q 006591 82 SDEEFVTVTVTGVL--HPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSNLPLLCHYPVKAQFMSNDPDYLSCKKKEC 159 (639)
Q Consensus 82 ~~~~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 159 (639)
-.|.-|+..++=.+ .|+..||||||==. .... ..| .-|.|+....+|..-.
T Consensus 17 ~P~~~v~C~Ytlt~~~~ps~~DWIGiFKVG-w~s~------rdY----------------~Tf~Wa~~p~~~~~~s---- 69 (546)
T PF07888_consen 17 IPGTDVECHYTLTPGFHPSSKDWIGIFKVG-WSST------RDY----------------YTFVWAPVPENYVEGS---- 69 (546)
T ss_pred CCCCCeEEEEecCCCCCCCCCCeeEEeecC-CCch------hhe----------------eeEEeeccCccccCCC----
Confidence 34556777766433 79999999999532 2222 235 4466665444453211
Q ss_pred ccccCCcceeeeeeeEEEEEEeeeccc----eEEEEeecCCccceeeeccccccccCCCCCceeEEeecc
Q 006591 160 KKRRNGKCKFTTCGGSIIFHVINIRTD----IEFVFFAGGFATPCILSRTQPVNFANPKKPLYGHLSSVD 225 (639)
Q Consensus 160 ~~~~~~~~~~~~g~g~~~~~l~n~r~~----~~f~~f~~g~~~~~~~a~s~~v~~~~~~~P~~~~l~~~~ 225 (639)
+....+.|.-+-+-.+ |.|.++...- .+.+.|.|..|..|+ |+-.-+++.+
T Consensus 70 -----------~~~~~V~F~ayyLPk~~~e~YqfcYv~~~g---~V~G~S~pFqf~~~~-p~eeLvtle~ 124 (546)
T PF07888_consen 70 -----------AVNCQVQFQAYYLPKDDDEFYQFCYVDQKG---EVRGASTPFQFRAPK-PLEELVTLED 124 (546)
T ss_pred -----------ccceEEEECcccCCCCCCCeEEEEEECCCc---cEEEecCCcccCCCC-ccccceeecc
Confidence 1223677874433333 8888876432 577888888887654 6655566644
No 135
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=76.14 E-value=45 Score=35.19 Aligned_cols=20 Identities=25% Similarity=0.428 Sum_probs=16.9
Q ss_pred EEEecCCCCCcEEEEEEccC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE 307 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~ 307 (639)
..+|.||+||+.|-..|...
T Consensus 261 tetI~~L~PG~~Yl~dV~~~ 280 (300)
T PF10179_consen 261 TETIKGLKPGTTYLFDVYVN 280 (300)
T ss_pred eeecccCCCCcEEEEEEEEe
Confidence 44799999999998888765
No 136
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=75.14 E-value=7.8 Score=39.33 Aligned_cols=42 Identities=24% Similarity=0.326 Sum_probs=24.8
Q ss_pred EEEEcCCccccCCcHHHHHHHHHhhh-hhhcCCceEEecCCCCcC
Q 006591 371 SVFHIGDISYATGFLVEWDFFLHQIT-PVASRVSYMTAIGNHERD 414 (639)
Q Consensus 371 fVl~~GDl~y~~g~~~~wd~f~~~l~-~l~~~vP~~~v~GNHD~~ 414 (639)
=-|++||.++. |+.+. +.|+=++- .+.-.--+..+.||||-.
T Consensus 72 ~YLFLGDyVDR-G~~Sv-Et~lLLl~lK~rYP~ritLiRGNHEsR 114 (303)
T KOG0372|consen 72 NYLFLGDYVDR-GYYSV-ETFLLLLALKVRYPDRITLIRGNHESR 114 (303)
T ss_pred ceEeecchhcc-ccchH-HHHHHHHHHhhcCcceeEEeeccchhh
Confidence 47889999964 55432 33332221 111233478899999974
No 137
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=72.78 E-value=14 Score=45.26 Aligned_cols=120 Identities=17% Similarity=0.251 Sum_probs=65.0
Q ss_pred EEEEEEeeeccc--eEEEEeecCC-----ccceeeeccccccc-cCCCCCce-eEEeeccCCCCceEEEEEeCCCCCc--
Q 006591 175 SIIFHVINIRTD--IEFVFFAGGF-----ATPCILSRTQPVNF-ANPKKPLY-GHLSSVDSTGTSMRLTWVSGDKEPQ-- 243 (639)
Q Consensus 175 ~~~~~l~n~r~~--~~f~~f~~g~-----~~~~~~a~s~~v~~-~~~~~P~~-~~l~~~~~~~~sm~v~W~T~~~~~~-- 243 (639)
....+|-+++.. |.|.+.+-+- .+ ..+.+ +++ .-|.+|-+ +.|.... .++++|.|.....+..
T Consensus 573 ~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS-~~i~V---~Tlsd~PsaPP~Nl~lev~s--StsVrVsW~pP~~~t~ng 646 (1381)
T KOG4221|consen 573 ATEYTINGLEKYTEYSIRVVAYNSAGSGVSS-ADITV---RTLSDVPSAPPQNLSLEVVS--STSVRVSWLPPPSETQNG 646 (1381)
T ss_pred ccEEEeecCCCccceEEEEEEecCCCCCCCC-CceEE---EeccCCCCCCCcceEEEecC--CCeEEEEccCCCcccccc
Confidence 445556666654 7776665321 11 11111 111 13556655 7777754 5899999997765332
Q ss_pred -----EEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEccC----CCcccee
Q 006591 244 -----QVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSE----AVDWSDK 314 (639)
Q Consensus 244 -----~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~ 314 (639)
.++|++.+.....+ .++. .++ .+ .-.+++|+|+|.|.+||... ....|.+
T Consensus 647 ~itgYkIRy~~~~~~~~~~-~t~v-----------~~n-------~~--~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w 705 (1381)
T KOG4221|consen 647 QITGYKIRYRKLSREDEVN-ETVV-----------KGN-------TT--QYLFNGLEPNTQYRVRISAMTVNGTGPASEW 705 (1381)
T ss_pred eEEEEEEEecccCcccccc-eeec-----------ccc-------hh--hhHhhcCCCCceEEEEEEEeccCCCCCcccc
Confidence 44555332211100 0110 111 12 23568899999999998642 2246788
Q ss_pred eEEECCC
Q 006591 315 IQFRTPP 321 (639)
Q Consensus 315 ~~F~T~P 321 (639)
..|.|+-
T Consensus 706 ~~aeT~~ 712 (1381)
T KOG4221|consen 706 VSAETPE 712 (1381)
T ss_pred eeccCcc
Confidence 8888863
No 138
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=72.70 E-value=12 Score=44.29 Aligned_cols=117 Identities=18% Similarity=0.156 Sum_probs=72.5
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCCC-----c-EEEEecCCCcccceeeeeeccccccCCC-----CCCCCCCCccCC
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKEP-----Q-QVEYGDDGKTQTSEVSTFTQENMCSSAL-----PSPAKDFGWHNP 283 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~-~V~yg~~g~~~~~~~~t~~~~~~~~~~~-----~~pa~~~g~~~~ 283 (639)
+++..+++.+..+.+++.+.|..-.... + .+.|.+.+ .-+.+.+...+.||+.- ..|.. +-...
T Consensus 488 e~~~l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP---~qNvT~~dg~~aCg~~~W~~~~v~~~~--~~p~~ 562 (1025)
T KOG4258|consen 488 EDLVLQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAP---FQNVTEEDGRDACGSNSWNVVDVDPPD--LIPND 562 (1025)
T ss_pred ccceeeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCC---ccccceecCccccccCcceEEeccCCc--CCCcc
Confidence 4566777776667899999999765431 2 45555333 23445666667777320 00110 00011
Q ss_pred ceEEEEEecCCCCCcEEEEEEccC--------CCccceeeEEECCCCCCCCceEEEEEecC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSE--------AVDWSDKIQFRTPPAGGSDEMKFLAYGDM 336 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~--------~~~~S~~~~F~T~P~~g~~~~~f~v~gD~ 336 (639)
++.--..|.||+|.|.|.|-|..- ....|++..|+|.|...+.++.++.-++.
T Consensus 563 ~~~~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~PspPl~~ls~sns 623 (1025)
T KOG4258|consen 563 GTHPGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPSPPLDVLSKSNS 623 (1025)
T ss_pred ccccceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCCCCCcchhhhccCc
Confidence 222267899999999999988642 12578999999988765566777766654
No 139
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=67.38 E-value=28 Score=42.49 Aligned_cols=72 Identities=17% Similarity=0.248 Sum_probs=42.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCC---C--CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGD---K--EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~---~--~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
+.+|..+++-... .++|.|.|.... + ..-.|+|....... + +|... . -.+..-
T Consensus 820 ~~ap~~~~~~~~s--~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~-~---------~~~~~----~------i~~~~~ 877 (1051)
T KOG3513|consen 820 PVAPTKLSAKPLS--SSEVNLSWKPPLWDNGKLTGYEVKYWKINEKE-G---------SLSRV----Q------IAGNRT 877 (1051)
T ss_pred CCCCccceeeccc--CceEEEEecCcCccCCccceeEEEEEEcCCCc-c---------cccce----e------ecCCcc
Confidence 4456555554433 589999995322 1 33589998544321 1 11100 0 012334
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
.+.|+||+|+|.|+..|..
T Consensus 878 ~~~ltgL~~~T~Y~~~vrA 896 (1051)
T KOG3513|consen 878 SWRLTGLEPNTKYRFYVRA 896 (1051)
T ss_pred eEeeeCCCCCceEEEEEEE
Confidence 6789999999999999864
No 140
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=64.31 E-value=57 Score=40.43 Aligned_cols=136 Identities=18% Similarity=0.195 Sum_probs=69.6
Q ss_pred eeeeEEEEEEeeeccc--eEEEEeecCCccceeeeccccccc-cCCCCCceeEEeeccCCCCceEEEEEeCCC-CCcEEE
Q 006591 171 TCGGSIIFHVINIRTD--IEFVFFAGGFATPCILSRTQPVNF-ANPKKPLYGHLSSVDSTGTSMRLTWVSGDK-EPQQVE 246 (639)
Q Consensus 171 ~g~g~~~~~l~n~r~~--~~f~~f~~g~~~~~~~a~s~~v~~-~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~~~~V~ 246 (639)
++.| +...+.|..-. |.|+.-+-+-. ..-..|.++.. ++|..|.+ .-+... ...++.|+|....- ..+...
T Consensus 479 ss~g-~~~tv~nl~p~t~Y~~rv~A~n~~--g~g~sS~pLkV~t~pEgp~~-~~a~at-s~~ti~v~WepP~~~n~~I~~ 553 (1381)
T KOG4221|consen 479 SSPG-IQVTVQNLSPLTMYFFRVRAKNEA--GSGESSAPLKVTTQPEGPVQ-LQAYAT-SPTTILVTWEPPPFGNGPITG 553 (1381)
T ss_pred cCCc-eEEEeeecccceeEEEEEeccCcc--cCCccCCceEEecCCCCCcc-cccccc-CcceEEEEecCCCCCCCCceE
Confidence 4445 66666665544 66666553211 01112223222 23445655 223333 45789999997763 223333
Q ss_pred E----ecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEccCCC---c-cceeeEEE
Q 006591 247 Y----GDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAV---D-WSDKIQFR 318 (639)
Q Consensus 247 y----g~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~~~---~-~S~~~~F~ 318 (639)
| ...+. +.-..+. ...++.+|.||+|.|.|.|||.-.+. + -|...+|+
T Consensus 554 yk~~ys~~~~---~~~~~~~---------------------~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~ 609 (1381)
T KOG4221|consen 554 YKLFYSEDDT---GKELRVE---------------------NNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVR 609 (1381)
T ss_pred EEEEEEcCCC---CceEEEe---------------------cCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEE
Confidence 3 32211 0000110 12357889999999999999975332 2 35667787
Q ss_pred CC---CCCCCCceEEEEEec
Q 006591 319 TP---PAGGSDEMKFLAYGD 335 (639)
Q Consensus 319 T~---P~~g~~~~~f~v~gD 335 (639)
|. |...++.++..+.+-
T Consensus 610 Tlsd~PsaPP~Nl~lev~sS 629 (1381)
T KOG4221|consen 610 TLSDVPSAPPQNLSLEVVSS 629 (1381)
T ss_pred eccCCCCCCCcceEEEecCC
Confidence 75 332224466655543
No 141
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=63.15 E-value=36 Score=35.72 Aligned_cols=79 Identities=11% Similarity=0.093 Sum_probs=48.8
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-----cCCCcEEEEcCCccccC-----CcHHHHHHHHHhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-----NGNVDSVFHIGDISYAT-----GFLVEWDFFLHQI 395 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-----~~~pDfVl~~GDl~y~~-----g~~~~wd~f~~~l 395 (639)
...+|+++||.+.+. |...+.++.|.+..+ ...|-.+++.|+.+... .....+.+.++.+
T Consensus 26 ~~~~~VilSDV~LD~----------p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~L 95 (291)
T PTZ00235 26 KRHNWIIMHDVYLDS----------PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKL 95 (291)
T ss_pred CceEEEEEEeeccCC----------HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHH
Confidence 457999999999863 223444455544442 12388999999997542 1122233333333
Q ss_pred h--------hhhcCCceEEecCCCCcC
Q 006591 396 T--------PVASRVSYMTAIGNHERD 414 (639)
Q Consensus 396 ~--------~l~~~vP~~~v~GNHD~~ 414 (639)
. .+..+.-++.|||-.|-.
T Consensus 96 a~llls~fp~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 96 SVMLISKFKLILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHHHHhChHHHhcCeEEEECCCCCCC
Confidence 2 234577799999999963
No 142
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=59.39 E-value=12 Score=40.07 Aligned_cols=23 Identities=26% Similarity=0.222 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCeEEEeCcccc
Q 006591 517 VKSVEPLLLKNKVDLVLFGHVHN 539 (639)
Q Consensus 517 r~~l~~Ll~~y~VdlvlsGH~H~ 539 (639)
.+.+++++++.++|+++-||.=.
T Consensus 233 ~~~v~~f~~~~~ldlivRaHqvv 255 (331)
T KOG0374|consen 233 PAVVEDFCKKLDLDLIVRAHQVV 255 (331)
T ss_pred HHHHHHHHHHhCcceEEEcCccc
Confidence 46788889999999999999644
No 143
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=58.54 E-value=12 Score=29.87 Aligned_cols=21 Identities=24% Similarity=0.493 Sum_probs=17.9
Q ss_pred EEEEEecCCCCCcEEEEEEcc
Q 006591 286 IHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
...+.+.+|.|+++|.++|..
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a 76 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRA 76 (93)
T ss_pred ccEEEEccccCCCEEEEEEEE
Confidence 356788999999999999965
No 144
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=55.95 E-value=7 Score=44.76 Aligned_cols=58 Identities=21% Similarity=0.224 Sum_probs=38.9
Q ss_pred HHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCC
Q 006591 355 SVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNS 418 (639)
Q Consensus 355 ~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~ 418 (639)
..+.++...|++.-+|-+-.+||+.+.+... +..++ .+...--+=.-|||||+-|.+.
T Consensus 171 ~fI~al~~lIqrL~VDhLHIvGDIyDRGp~p---d~ImD---~Lm~~hsvDIQWGNHDIlWMGA 228 (640)
T PF06874_consen 171 EFIIALSELIQRLAVDHLHIVGDIYDRGPRP---DKIMD---RLMNYHSVDIQWGNHDILWMGA 228 (640)
T ss_pred HHHHHHHHHHHHHhhhheeecccccCCCCCh---hHHHH---HHhcCCCccccccchHHHHHHH
Confidence 4556666667777899999999999654333 33333 3333444567899999977654
No 145
>PF00960 Neocarzinostat: Neocarzinostatin family; InterPro: IPR002186 This family is comprised of antitumour antibiotic chromoproteins, as represented by neocarzinostatin []. These chromoproteins consist of a noncovalently bound, labile enediyne chromophore and its stabilising carrier apoprotein. The protein component of the chromophore displays an unusual bicyclic dienediyne structure. The chromoprotein inter-chelates the DNA, where its cycloaromatisation produces a biradical intermediate that has the ability to abstract hydrogens from the sugar moiety of DNA. This causes single- and double-strand breaks in the DNA []. In addition to their ability to cleave DNA at sites specific for each chromophore, results indicate that these chromoproteins also possess proteolytic activity against histones, with histone H1 as the preferred substrate []. Neocarzinostatin has 2 disulphide bridges and is kidney-shaped with 2 defined domains that hold a binding cavity. The larger domain forms a 7-stranded antiparallel beta-barrel and the smaller domain consists of 2 anti-parallel strands of beta sheet that are perpendicular to each other []. Other members of this family include macromycin, actinoxanthine, kedarcidin [], and C-1027 [].; GO: 0003677 DNA binding, 0006952 defense response; PDB: 2G0K_A 2CBT_A 2CBO_A 2CBQ_E 2CBM_A 1J5I_A 1NCO_A 1NOA_A 1J5H_A 1O5P_A ....
Probab=47.15 E-value=24 Score=31.45 Aligned_cols=23 Identities=57% Similarity=0.619 Sum_probs=21.5
Q ss_pred EEEecCCCCCCCCCEEEEEEecc
Q 006591 72 NISVSKSSDLSDEEFVTVTVTGV 94 (639)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~ 94 (639)
.|+|+|+.-|.||+.|+|+-+|.
T Consensus 1 ~~svsPstGLsdgqtVtVsgTGl 23 (110)
T PF00960_consen 1 AISVSPSTGLSDGQTVTVSGTGL 23 (110)
T ss_dssp EEEEESSSSBSTTEEEEEEEESS
T ss_pred CeeecCCCCCCCCCEEEEEeecc
Confidence 48899999999999999999996
No 146
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=45.81 E-value=49 Score=34.04 Aligned_cols=69 Identities=14% Similarity=0.140 Sum_probs=36.4
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~ 404 (639)
--+.+.||.|... .-+-++. .+--..|| -.++.||.++. |+.+. +-...+-.+. -.--+
T Consensus 60 ~pvtvcGDvHGqf--------------~dl~ELf-kiGG~~pdtnylfmGDyvdr-Gy~Sv--etVS~lva~Kvry~~rv 121 (319)
T KOG0371|consen 60 CPVTVCGDVHGQF--------------HDLIELF-KIGGLAPDTNYLFMGDYVDR-GYYSV--ETVSLLVALKVRYPDRV 121 (319)
T ss_pred cceEEecCcchhH--------------HHHHHHH-HccCCCCCcceeeeeeeccc-ccchH--HHHHHHHHhhcccccee
Confidence 3567889999431 1122222 22233444 37789999964 54432 1222222211 12346
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
-.+.||||..
T Consensus 122 tilrGNHEsr 131 (319)
T KOG0371|consen 122 TILRGNHESR 131 (319)
T ss_pred EEecCchHHH
Confidence 7899999973
No 147
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=42.61 E-value=21 Score=39.39 Aligned_cols=58 Identities=19% Similarity=0.224 Sum_probs=37.2
Q ss_pred HHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCC
Q 006591 355 SVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNS 418 (639)
Q Consensus 355 ~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~ 418 (639)
+.+-++...+++..+|-+-.+||+.+.+.+. |..++.+.. .-.+=+-|||||.-|.+.
T Consensus 177 e~I~ala~~iqrLvVDhLHiVGDIyDRGP~p---d~Imd~L~~---yhsvDiQWGNHDilWmgA 234 (648)
T COG3855 177 EFIIALAYLIQRLVVDHLHIVGDIYDRGPYP---DKIMDTLIN---YHSVDIQWGNHDILWMGA 234 (648)
T ss_pred HHHHHHHHHHHHHhhhheeeecccccCCCCc---hHHHHHHhh---cccccccccCcceEEeec
Confidence 3444555666677899999999998665443 333333322 233456799999977654
No 148
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=42.58 E-value=62 Score=35.96 Aligned_cols=70 Identities=16% Similarity=0.154 Sum_probs=47.0
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+.++++.||.... ..+.+++|.+.-++ ...|+++.+|++...+....+|..+..-...+ .+|.|
T Consensus 5 ~~kILv~Gd~~Gr-------------~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~v--PiptY 69 (528)
T KOG2476|consen 5 DAKILVCGDVEGR-------------FDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTKKV--PIPTY 69 (528)
T ss_pred CceEEEEcCcccc-------------HHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCccC--ceeEE
Confidence 3699999997632 23455665444333 55999999999996555666777766654433 57777
Q ss_pred EecCCC
Q 006591 406 TAIGNH 411 (639)
Q Consensus 406 ~v~GNH 411 (639)
+.-+|-
T Consensus 70 ~~g~~~ 75 (528)
T KOG2476|consen 70 FLGDNA 75 (528)
T ss_pred EecCCC
Confidence 766665
No 149
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=42.49 E-value=35 Score=35.35 Aligned_cols=50 Identities=24% Similarity=0.317 Sum_probs=34.8
Q ss_pred HHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCe-EEEeCcccc
Q 006591 477 KWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVD-LVLFGHVHN 539 (639)
Q Consensus 477 ~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~Vd-lvlsGH~H~ 539 (639)
+.|+.+|+...+-..| ++-.|.+ ..++-+.+.+|+++++.| |||+||+-.
T Consensus 115 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 115 EYLRKCLKLYKKIGVP--VVGIHCK-----------EKEMPEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHHhCCc--eEEEEec-----------chhchHHHHHHHHHhCCCEEEEeCchhh
Confidence 5799999876543333 3333332 134467899999999999 679999954
No 150
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=41.61 E-value=79 Score=31.77 Aligned_cols=40 Identities=23% Similarity=0.361 Sum_probs=23.5
Q ss_pred EEEcCCccccCCcHHHHHHHHHhhhhhhcCCc--eEEecCCCCcC
Q 006591 372 VFHIGDISYATGFLVEWDFFLHQITPVASRVS--YMTAIGNHERD 414 (639)
Q Consensus 372 Vl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP--~~~v~GNHD~~ 414 (639)
-++.||.++. |+.+ .+.|.-.+ -+.++.| +-...||||..
T Consensus 76 YiFmGDfVDR-GyyS-LEtfT~l~-~LkaryP~~ITLlRGNHEsR 117 (306)
T KOG0373|consen 76 YIFMGDFVDR-GYYS-LETFTLLL-LLKARYPAKITLLRGNHESR 117 (306)
T ss_pred eEEecccccc-cccc-HHHHHHHH-HHhhcCCceeEEeeccchhh
Confidence 6788999965 5433 23333322 2333443 56789999964
No 151
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=41.07 E-value=48 Score=34.58 Aligned_cols=50 Identities=26% Similarity=0.314 Sum_probs=35.2
Q ss_pred HHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCe-EEEeCcccc
Q 006591 477 KWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVD-LVLFGHVHN 539 (639)
Q Consensus 477 ~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~Vd-lvlsGH~H~ 539 (639)
+.|+.+|+...+-..| +.-.|.+ ..++-+.+.+|+++++.| |||+||+-.
T Consensus 116 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 116 EYLNKCLKVYKQLGIP--AVGIHVP-----------EKEQPEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred HHHHHHHHHHHHcCCc--eEEEEec-----------hHHhhHHHHHHHHHcCCCEEEEeCchhh
Confidence 5799999876443332 3333332 245568899999999999 679999874
No 152
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=39.82 E-value=31 Score=32.88 Aligned_cols=17 Identities=24% Similarity=0.464 Sum_probs=14.0
Q ss_pred CCCeEEEeCccccccee
Q 006591 527 NKVDLVLFGHVHNYERT 543 (639)
Q Consensus 527 y~VdlvlsGH~H~YeRt 543 (639)
.+.+++++||+|.....
T Consensus 124 ~~~d~vi~GHtH~~~~~ 140 (168)
T cd07390 124 DRGSWNLHGHIHSNSPD 140 (168)
T ss_pred CCCeEEEEeeeCCCCCC
Confidence 46789999999987754
No 153
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=33.67 E-value=2.1e+02 Score=24.91 Aligned_cols=23 Identities=9% Similarity=0.274 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCeEEEeCcccc
Q 006591 517 VKSVEPLLLKNKVDLVLFGHVHN 539 (639)
Q Consensus 517 r~~l~~Ll~~y~VdlvlsGH~H~ 539 (639)
.+.+....+++++|+++.|+.+.
T Consensus 74 ~~~I~~~~~~~~~dllviG~~~~ 96 (124)
T cd01987 74 AEAIVEFAREHNVTQIVVGKSRR 96 (124)
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC
Confidence 46778888999999998888865
No 154
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=32.82 E-value=57 Score=28.33 Aligned_cols=23 Identities=13% Similarity=0.388 Sum_probs=19.8
Q ss_pred ceEEEEEecCCCCCcEEEEEEcc
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
+-++++.+.++.+|+.|.|+|..
T Consensus 44 ~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 44 GGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45678899999999999999964
No 155
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=28.50 E-value=30 Score=20.58 Aligned_cols=14 Identities=50% Similarity=0.854 Sum_probs=10.2
Q ss_pred HHHHHHHHHHhhcc
Q 006591 13 KLMLILCVCLFFGF 26 (639)
Q Consensus 13 ~~~~~~~~~~~~~~ 26 (639)
|+..||++++++++
T Consensus 3 k~vIIlvvLLliSf 16 (19)
T PF13956_consen 3 KLVIILVVLLLISF 16 (19)
T ss_pred eehHHHHHHHhccc
Confidence 56677788877776
No 156
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=28.09 E-value=1e+02 Score=33.14 Aligned_cols=42 Identities=21% Similarity=0.393 Sum_probs=23.8
Q ss_pred EEEEcCCccccCCcHH-HHHHHHHhhhhhhcCCceEEecCCCCcC
Q 006591 371 SVFHIGDISYATGFLV-EWDFFLHQITPVASRVSYMTAIGNHERD 414 (639)
Q Consensus 371 fVl~~GDl~y~~g~~~-~wd~f~~~l~~l~~~vP~~~v~GNHD~~ 414 (639)
-.+++||.++. |+-+ +---++-.++ +.-...++...||||-.
T Consensus 117 ~YLFLGDYVDR-GyFSiECvlYLwsLK-i~yp~tl~lLRGNHECr 159 (517)
T KOG0375|consen 117 RYLFLGDYVDR-GYFSIECVLYLWSLK-INYPKTLFLLRGNHECR 159 (517)
T ss_pred eeEeecccccc-ceeeeehHHHHHHHh-cCCCCeEEEecCCcchh
Confidence 47889999965 4422 1111222222 12234578899999964
No 157
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=27.09 E-value=80 Score=26.31 Aligned_cols=20 Identities=20% Similarity=0.250 Sum_probs=17.8
Q ss_pred eEEEEEecCCCCCcEEEEEEc
Q 006591 285 YIHTAVMTGLQPSSTVSYRYG 305 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg 305 (639)
-++++++.++ +|..|.|++.
T Consensus 40 G~W~~~v~~~-~g~~Y~y~v~ 59 (85)
T cd02853 40 GWFEAEVPGA-AGTRYRYRLD 59 (85)
T ss_pred cEEEEEeCCC-CCCeEEEEEC
Confidence 4677899999 9999999997
No 158
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=27.08 E-value=73 Score=28.39 Aligned_cols=23 Identities=26% Similarity=0.547 Sum_probs=20.1
Q ss_pred ceEEEEEecCCCCCcEEEEEEcc
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
+-++++.+.++.+|+.|.|+|..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45778999999999999999973
No 159
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=26.84 E-value=79 Score=27.21 Aligned_cols=24 Identities=8% Similarity=-0.007 Sum_probs=20.4
Q ss_pred ceEEEEEecCCCCCcEEEEEEccC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSE 307 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~ 307 (639)
+-++++.+.++.+|..|.|++...
T Consensus 46 ~gvw~~~v~~~~~g~~Y~y~i~~~ 69 (100)
T cd02860 46 NGVWSVTLDGDLEGYYYLYEVKVY 69 (100)
T ss_pred CCEEEEEeCCccCCcEEEEEEEEe
Confidence 456789999999999999999653
No 160
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=22.80 E-value=6e+02 Score=31.61 Aligned_cols=226 Identities=18% Similarity=0.264 Sum_probs=108.2
Q ss_pred CccccccccccCCC-CCCeeEEEecCCC-CCCCCCEEEEEEeccC---CCCCCCEEEEEcCCCCCCCCCCcCCcc-cc-c
Q 006591 53 FRVLNRKYLSDCPF-RNPFLNISVSKSS-DLSDEEFVTVTVTGVL---HPSRHDWVAMISPAHSDVSSCPFNGIL-YA-Q 125 (639)
Q Consensus 53 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~~~~~~~~~~-~~-~ 125 (639)
|-..+++.++.|.. .+|...++=...+ .+..++.+.|.=.|.. +++.+|= |.| +|-..+.. =. .
T Consensus 437 ~a~~g~~v~i~C~~~asP~p~~~W~k~~~~~~~~~r~~i~edGtL~I~n~t~~Da-G~Y--------tC~A~N~~G~a~~ 507 (1051)
T KOG3513|consen 437 MAVVGGTVTIDCKPFASPKPKVSWLKGGEKLLQSGRIRILEDGTLEISNVTRSDA-GKY--------TCVAENKLGKAES 507 (1051)
T ss_pred EEEeCCeEEEeeccCCCCcceEEEEcCCcccccCceEEECCCCcEEecccCcccC-cEE--------EEEEEcccCccce
Confidence 66778899999964 6676666654444 4666666666444421 2333331 333 24332111 00 0
Q ss_pred cCC--CCCCCccccccceeEEccCCcccccccccccc-------cccCC---------cceee-ee--eeEEEEEEeeec
Q 006591 126 TGD--LSNLPLLCHYPVKAQFMSNDPDYLSCKKKECK-------KRRNG---------KCKFT-TC--GGSIIFHVINIR 184 (639)
Q Consensus 126 ~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~---------~~~~~-~g--~g~~~~~l~n~r 184 (639)
|+. ..+.+.+-++|...---..+--.|.|..+.-. +..+| ....+ -| +|-|+++=+.++
T Consensus 508 ~~~L~Vkd~tri~~~P~~~~v~~g~~v~l~Ce~shD~~ld~~f~W~~nG~~id~~~~~~~~~~~~~~~~g~L~i~nv~l~ 587 (1051)
T KOG3513|consen 508 TGNLIVKDATRITLAPSNTDVKVGESVTLTCEASHDPSLDITFTWKKNGRPIDFNPDGDHFEINDGSDSGRLTIANVSLE 587 (1051)
T ss_pred EEEEEEecCceEEeccchhhhccCceEEEEeecccCCCcceEEEEEECCEEhhccCCCCceEEeCCcCccceEEEeeccc
Confidence 111 22455566666555544444444443322000 00000 00000 11 123555544444
Q ss_pred cc--eEEEEeecCCccceeeeccccccccCCCCCceeEEeeccCCCCceEEEEEeCCC-CCcEEEEecCCCcccceeeee
Q 006591 185 TD--IEFVFFAGGFATPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDK-EPQQVEYGDDGKTQTSEVSTF 261 (639)
Q Consensus 185 ~~--~~f~~f~~g~~~~~~~a~s~~v~~~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~~~~V~yg~~g~~~~~~~~t~ 261 (639)
.. |.++.=.. +.+ +-+.+..+--..|..|..+++.-.. .+.++|+|.-+.. ..+...|..+..+.. ...+
T Consensus 588 ~~G~Y~C~aqT~-~Ds--~s~~A~l~V~gpPgpP~~v~~~~i~--~t~~~lsW~~g~dn~SpI~~Y~iq~rt~~--~~~W 660 (1051)
T KOG3513|consen 588 DSGKYTCVAQTA-LDS--ASARADLLVRGPPGPPPDVHVDDIS--DTTARLSWSPGSDNNSPIEKYTIQFRTPF--PGKW 660 (1051)
T ss_pred cCceEEEEEEEe-ecc--hhcccceEEecCCCCCCceeEeeec--cceEEEEeecCCCCCCCceEEeEEecCCC--CCcc
Confidence 44 33322221 111 1111112222346777777776554 4789999997654 345666764433221 1122
Q ss_pred eccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEcc
Q 006591 262 TQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 262 ~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..-. ..|.+. .|- +++++-+|.|-..|.+||..
T Consensus 661 ~~v~------~vp~~~-----~~~-~sa~vv~L~Pwv~YeFRV~A 693 (1051)
T KOG3513|consen 661 KAVT------TVPGNI-----TGD-ESATVVNLSPWVEYEFRVVA 693 (1051)
T ss_pred eEee------ECCCcc-----cCc-cceeEEccCCCcceEEEEEE
Confidence 2111 114433 234 67999999999999999975
No 161
>PF10989 DUF2808: Protein of unknown function (DUF2808); InterPro: IPR021256 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=21.37 E-value=1.2e+02 Score=28.34 Aligned_cols=27 Identities=22% Similarity=0.320 Sum_probs=22.1
Q ss_pred EEecCCCCCCCCCEEEEEEeccCCCCC
Q 006591 73 ISVSKSSDLSDEEFVTVTVTGVLHPSR 99 (639)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (639)
|+|..+.++..|+.|+|.++++.+|+.
T Consensus 91 i~I~f~~PV~pG~tv~V~l~~v~NP~~ 117 (146)
T PF10989_consen 91 ITITFDEPVPPGTTVTVVLSPVRNPRS 117 (146)
T ss_pred EEEEeCCCCCCCCEEEEEEEeeeCCCC
Confidence 444556889999999999999988865
No 162
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=20.36 E-value=98 Score=26.56 Aligned_cols=19 Identities=11% Similarity=0.321 Sum_probs=15.0
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
.++|.+|+|++.|.-+|..
T Consensus 68 ~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 68 SVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEEES--TTSEEEEEEEE
T ss_pred EEEEeCCCCCCCEEEEEEE
Confidence 4689999999999999876
Done!