Query 006591
Match_columns 639
No_of_seqs 491 out of 2889
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 03:41:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006591.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006591hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xzw_A Purple acid phosphatase 100.0 2.9E-58 1E-62 504.8 42.6 383 212-638 21-424 (426)
2 2qfp_A Purple acid phosphatase 100.0 2.9E-57 9.9E-62 496.6 41.9 382 212-638 15-417 (424)
3 2yeq_A Apased, PHOD, alkaline 100.0 2.7E-34 9.1E-39 322.0 36.0 361 215-622 7-459 (527)
4 3tgh_A Glideosome-associated p 100.0 1.9E-34 6.4E-39 306.1 22.1 263 326-637 2-308 (342)
5 1ute_A Protein (II purple acid 100.0 2.7E-30 9.2E-35 268.4 17.8 261 326-637 5-304 (313)
6 3ib7_A ICC protein; metallopho 99.9 3E-23 1E-27 217.7 23.1 251 325-626 23-282 (330)
7 2nxf_A Putative dimetal phosph 99.9 5E-22 1.7E-26 206.6 19.2 239 326-623 4-314 (322)
8 3d03_A Phosphohydrolase; glyce 99.9 1.8E-21 6E-26 198.6 22.8 243 328-622 1-254 (274)
9 2xmo_A LMO2642 protein; phosph 99.8 3.1E-18 1.1E-22 187.8 22.0 216 325-543 37-288 (443)
10 1uf3_A Hypothetical protein TT 99.5 9.1E-14 3.1E-18 137.2 15.0 170 327-538 5-190 (228)
11 2yvt_A Hypothetical protein AQ 99.5 1.4E-13 4.7E-18 139.2 12.4 184 326-538 4-222 (260)
12 2q8u_A Exonuclease, putative; 99.4 5.3E-13 1.8E-17 141.0 10.2 254 326-633 17-289 (336)
13 1z2w_A Vacuolar protein sortin 99.4 5.1E-11 1.7E-15 115.7 21.0 181 327-635 10-191 (192)
14 3ck2_A Conserved uncharacteriz 99.3 4.4E-11 1.5E-15 114.4 17.9 167 327-633 6-172 (176)
15 2a22_A Vacuolar protein sortin 99.3 2.2E-11 7.4E-16 120.6 16.0 190 327-635 25-215 (215)
16 1nnw_A Hypothetical protein; s 99.3 5.9E-12 2E-16 127.0 11.0 213 328-620 2-222 (252)
17 3av0_A DNA double-strand break 99.2 7E-11 2.4E-15 127.3 14.8 189 326-542 19-212 (386)
18 3rqz_A Metallophosphoesterase; 99.2 1.4E-10 4.7E-15 117.0 13.3 216 326-620 2-218 (246)
19 3qfm_A SAPH, putative uncharac 99.2 1.1E-10 3.9E-15 119.6 12.5 218 325-621 9-228 (270)
20 3rl5_A Metallophosphoesterase 99.2 2E-10 6.8E-15 118.7 13.3 187 326-541 58-259 (296)
21 1s3l_A Hypothetical protein MJ 99.1 1.3E-09 4.5E-14 105.7 15.0 63 328-414 26-88 (190)
22 3tho_B Exonuclease, putative; 99.1 8E-10 2.7E-14 118.7 13.9 199 328-542 1-216 (379)
23 2kkn_A Uncharacterized protein 99.0 1.4E-08 4.8E-13 97.4 17.6 64 327-413 22-85 (178)
24 1xm7_A Hypothetical protein AQ 98.9 9.8E-10 3.3E-14 106.7 7.9 149 328-542 2-153 (195)
25 3t1i_A Double-strand break rep 98.9 1.5E-08 5.3E-13 109.8 16.4 245 326-626 31-325 (431)
26 4fbw_A DNA repair protein RAD3 98.9 4.9E-08 1.7E-12 105.5 19.2 257 325-633 11-315 (417)
27 4fbk_A DNA repair and telomere 98.9 1.1E-07 3.8E-12 103.6 20.9 88 325-414 74-196 (472)
28 1ii7_A MRE11 nuclease; RAD50, 98.8 5.1E-08 1.7E-12 102.6 15.0 86 328-414 1-88 (333)
29 1su1_A Hypothetical protein YF 98.7 3.1E-07 1.1E-11 90.1 16.5 72 327-414 25-101 (208)
30 1hp1_A 5'-nucleotidase; metall 98.5 2E-07 7E-12 103.9 8.5 192 326-541 7-232 (516)
31 2z1a_A 5'-nucleotidase; metal- 98.4 1.6E-06 5.5E-11 97.5 14.6 188 326-542 28-244 (552)
32 4h2g_A 5'-nucleotidase; dimer, 98.3 1.2E-06 4.1E-11 98.4 10.9 193 325-541 23-245 (546)
33 3qfk_A Uncharacterized protein 98.3 7.3E-06 2.5E-10 91.6 15.6 196 326-541 18-252 (527)
34 2wdc_A SOXB, sulfur oxidation 98.3 8.5E-06 2.9E-10 91.7 16.1 153 354-541 104-291 (562)
35 3ive_A Nucleotidase; structura 98.2 1.3E-05 4.3E-10 89.3 14.1 205 326-540 5-237 (509)
36 3ztv_A NAD nucleotidase, NADN; 98.1 9.3E-06 3.2E-10 91.8 11.0 192 326-541 11-231 (579)
37 1t71_A Phosphatase, conserved 97.8 0.00033 1.1E-08 71.6 16.1 175 327-541 4-188 (281)
38 3gve_A YFKN protein; alpha-bet 97.8 0.00016 5.6E-09 76.1 12.8 55 327-381 11-68 (341)
39 3c9f_A 5'-nucleotidase; 2',3'- 97.7 0.00028 9.7E-09 79.2 14.9 87 326-415 14-108 (557)
40 3jyf_A 2',3'-cyclic nucleotide 97.7 0.00034 1.2E-08 73.6 13.6 56 326-381 7-65 (339)
41 4h1s_A 5'-nucleotidase; hydrol 97.7 0.00086 2.9E-08 74.8 17.6 185 327-541 3-223 (530)
42 2z06_A Putative uncharacterize 97.6 0.0011 3.7E-08 66.6 15.5 172 328-541 1-175 (252)
43 1t70_A Phosphatase; crystal, X 97.6 0.0016 5.5E-08 65.6 16.7 174 328-541 1-178 (255)
44 1g5b_A Serine/threonine protei 97.2 0.00039 1.3E-08 68.2 6.0 68 326-414 11-79 (221)
45 2qjc_A Diadenosine tetraphosph 97.2 0.00033 1.1E-08 71.0 5.5 66 328-414 19-85 (262)
46 2dfj_A Diadenosinetetraphospha 97.1 0.00062 2.1E-08 69.7 6.6 68 328-414 1-69 (280)
47 2ede_A Netrin receptor DCC; tu 96.9 0.0089 3.1E-07 51.2 11.4 92 214-324 10-110 (114)
48 1x5l_A Ephrin type-A receptor 96.5 0.012 4.2E-07 50.0 9.6 88 213-324 11-107 (111)
49 1x5f_A Neogenin; RGM binding, 96.5 0.027 9.3E-07 48.6 11.8 88 212-322 17-114 (120)
50 2edd_A Netrin receptor DCC; tu 96.5 0.023 7.9E-07 50.1 11.4 86 213-322 19-117 (123)
51 2z72_A Protein-tyrosine-phosph 96.5 0.003 1E-07 66.4 6.4 74 327-414 70-153 (342)
52 2ie4_C PP2A-alpha;, serine/thr 96.5 0.0049 1.7E-07 63.8 7.9 70 328-414 50-121 (309)
53 2djs_A Ephrin type-B receptor 96.4 0.02 6.9E-07 48.5 10.2 87 213-323 8-103 (108)
54 2e7h_A Ephrin type-B receptor 96.4 0.013 4.5E-07 50.0 9.0 88 213-323 8-104 (109)
55 1fjm_A Protein serine/threonin 96.3 0.0075 2.6E-07 63.0 8.1 70 328-414 57-128 (330)
56 2dm4_A Sortilin-related recept 96.2 0.044 1.5E-06 46.4 11.2 85 213-321 8-101 (108)
57 1x4y_A Biregional cell adhesio 96.2 0.064 2.2E-06 46.0 12.3 90 214-324 10-110 (114)
58 3h63_A Serine/threonine-protei 96.2 0.013 4.3E-07 60.8 8.9 74 326-414 58-132 (315)
59 2dju_A Receptor-type tyrosine- 96.1 0.056 1.9E-06 45.2 11.6 86 213-322 8-100 (106)
60 3e7a_A PP-1A, serine/threonine 96.1 0.011 3.9E-07 60.7 8.1 70 329-413 57-126 (299)
61 2haz_A N-CAM 1, neural cell ad 96.1 0.016 5.6E-07 49.2 7.8 88 213-321 7-104 (105)
62 3icf_A PPT, serine/threonine-p 96.1 0.016 5.4E-07 60.6 9.1 73 326-413 62-135 (335)
63 3e0j_A DNA polymerase subunit 96.1 0.072 2.5E-06 58.0 14.5 139 326-485 199-378 (476)
64 2ed7_A Netrin receptor DCC; tu 96.0 0.034 1.2E-06 47.8 9.6 87 213-322 18-113 (119)
65 1x5a_A Ephrin type-A receptor 95.9 0.058 2E-06 46.1 10.6 37 289-325 64-104 (107)
66 1x5j_A Neogenin; RGM binding, 95.9 0.03 1E-06 48.5 8.8 86 213-322 9-107 (113)
67 3ll8_A Serine/threonine-protei 95.8 0.016 5.3E-07 61.0 7.9 70 328-414 70-141 (357)
68 1x5z_A Receptor-type tyrosine- 95.8 0.05 1.7E-06 46.4 10.0 86 213-323 18-110 (115)
69 2rb8_A Tenascin; beta sheet,lo 95.8 0.099 3.4E-06 44.3 11.6 88 213-323 3-95 (104)
70 1wao_1 Serine/threonine protei 95.8 0.021 7E-07 62.6 8.9 71 326-413 211-284 (477)
71 2kbg_A N-CAM 2, neural cell ad 95.6 0.058 2E-06 47.2 9.5 87 213-323 9-103 (114)
72 1x5x_A Fibronectin type-III do 95.6 0.094 3.2E-06 44.4 10.7 35 288-322 65-103 (109)
73 3teu_A Fibcon; FN3 domain, fib 95.6 0.11 3.6E-06 43.3 10.8 84 214-320 3-89 (98)
74 1x5g_A Neogenin; RGM binding, 95.6 0.069 2.3E-06 45.6 9.8 84 213-322 18-110 (116)
75 2crz_A Fibronectin type-III do 95.6 0.064 2.2E-06 45.6 9.5 87 213-323 9-105 (110)
76 2ed8_A Netrin receptor DCC; tu 95.5 0.13 4.5E-06 43.2 11.4 84 213-322 8-100 (106)
77 1uc6_A CNTF receptor, ciliary 95.5 0.14 4.7E-06 43.7 11.6 87 211-320 6-106 (109)
78 1wfo_A Sidekick 2; FN3, cell a 95.5 0.074 2.5E-06 46.5 10.0 88 213-322 28-124 (130)
79 3fl7_A Ephrin receptor; ATP-bi 95.5 0.15 5.1E-06 56.8 14.4 122 175-323 399-535 (536)
80 1va9_A DOWN syndrome cell adhe 95.5 0.092 3.2E-06 45.1 10.3 89 215-322 18-117 (122)
81 1aui_A Calcineurin, serine/thr 95.4 0.029 9.8E-07 61.6 8.0 72 328-414 83-154 (521)
82 1x3d_A Fibronectin type-III do 95.3 0.1 3.5E-06 44.8 10.2 86 213-322 18-112 (118)
83 2dmk_A Midline 2 isoform 2; mi 95.2 0.11 3.8E-06 45.7 10.1 94 212-322 15-118 (127)
84 1x4x_A Fibronectin type-III do 95.2 0.072 2.4E-06 45.1 8.6 36 288-323 62-101 (106)
85 2dle_A Receptor-type tyrosine- 95.1 0.22 7.4E-06 42.6 11.4 84 212-323 7-98 (104)
86 2dlh_A Receptor-type tyrosine- 95.1 0.091 3.1E-06 45.1 9.0 36 287-322 76-115 (121)
87 2e3v_A Neural cell adhesion mo 95.0 0.076 2.6E-06 46.3 8.5 89 213-322 8-106 (122)
88 2db8_A Tripartite motif protei 95.0 0.043 1.5E-06 47.1 6.6 36 288-323 66-105 (110)
89 3b83_A Ten-D3; beta sheet, com 95.0 0.16 5.4E-06 42.6 10.0 79 213-314 2-83 (100)
90 2edy_A Receptor-type tyrosine- 94.9 0.039 1.3E-06 46.0 6.0 34 288-321 65-102 (103)
91 3tes_A Tencon; fibronectin typ 94.9 0.22 7.4E-06 41.7 10.7 68 216-306 5-74 (98)
92 2ee2_A Contactin-1; neural cel 94.9 0.21 7.2E-06 42.9 10.8 87 215-323 21-114 (119)
93 2gee_A Hypothetical protein; f 94.8 0.84 2.9E-05 43.0 16.0 69 215-306 116-187 (203)
94 1qr4_A Protein (tenascin); fib 94.8 0.47 1.6E-05 43.7 13.9 86 213-322 95-185 (186)
95 2dn7_A Receptor-type tyrosine- 94.8 0.3 1E-05 40.8 11.4 83 213-321 8-99 (107)
96 2edx_A Protein tyrosine phosph 94.6 0.23 7.8E-06 43.3 10.6 36 287-322 79-118 (134)
97 1cd9_B G-CSF-R, protein (G-CSF 94.6 0.2 6.8E-06 47.7 11.0 89 212-321 108-213 (215)
98 2dkm_A Collagen alpha-1(XX) ch 94.5 0.2 6.9E-06 42.2 9.6 88 213-323 9-100 (104)
99 2d9q_B Granulocyte colony-stim 94.5 0.18 6E-06 51.2 10.8 89 213-322 203-308 (313)
100 2cuh_A Tenascin-X; fibronectin 94.5 0.4 1.4E-05 41.0 11.6 86 212-322 7-97 (115)
101 1bqu_A Protein (GP130); cytoki 94.5 0.12 4.1E-06 49.0 9.0 92 212-322 103-206 (215)
102 2ibg_A CG9211-PA, GH03927P; IH 94.5 0.64 2.2E-05 43.7 14.1 125 173-320 67-211 (214)
103 1i1r_A GP130, interleukin-6 re 94.4 0.092 3.2E-06 53.0 8.4 91 212-321 199-301 (303)
104 2ed9_A Netrin receptor DCC; tu 94.4 0.16 5.3E-06 43.9 8.8 82 215-321 31-123 (124)
105 3r8q_A Fibronectin; heparin, F 94.3 3.1 0.00011 41.0 19.6 99 212-335 112-215 (290)
106 2ee3_A Collagen alpha-1(XX) ch 94.3 0.22 7.4E-06 42.9 9.4 85 214-322 9-98 (108)
107 2yuw_A Myosin binding protein 94.2 0.22 7.6E-06 42.1 9.3 71 213-306 8-84 (110)
108 1uem_A KIAA1568 protein; immun 94.2 0.14 4.8E-06 43.7 8.0 87 213-322 16-112 (117)
109 3qwq_B Adnectin; cell surface 94.2 0.28 9.7E-06 42.4 10.0 71 213-306 4-76 (114)
110 1x5h_A Neogenin; RGM binding, 94.2 0.13 4.5E-06 44.9 7.9 36 287-322 77-116 (132)
111 2jll_A NCAM2, neural cell adhe 94.1 0.27 9.4E-06 50.8 11.6 36 287-323 349-388 (389)
112 1ujt_A KIAA1568 protein; fibro 94.1 0.25 8.6E-06 43.4 9.6 36 287-322 75-114 (120)
113 2dbj_A Proto-oncogene tyrosine 94.1 0.43 1.5E-05 41.4 11.1 36 288-323 80-119 (124)
114 3n1f_C Cell adhesion molecule- 94.1 0.41 1.4E-05 40.3 10.6 84 215-319 7-101 (102)
115 2yrz_A Integrin beta-4; GP150, 94.1 0.15 5.2E-06 43.6 8.0 72 212-306 17-92 (118)
116 1tdq_A Tenascin-R; extracellul 94.1 4.7 0.00016 39.4 20.1 102 212-335 104-210 (283)
117 1x4z_A Biregional cell adhesio 93.9 0.33 1.1E-05 41.8 9.9 89 212-322 17-116 (121)
118 2vkw_A Neural cell adhesion mo 93.9 0.3 1E-05 46.0 10.5 90 212-322 8-107 (209)
119 2b5i_B Interleukin-2 receptor 93.9 0.27 9.3E-06 47.6 10.3 89 213-323 106-209 (214)
120 1wk0_A KIAA0970 protein; fibro 93.9 0.2 6.8E-06 45.3 8.5 36 288-323 83-122 (137)
121 1wis_A KIAA1514 protein; FNIII 93.9 0.42 1.4E-05 41.5 10.6 91 212-323 17-120 (124)
122 1wf5_A Sidekick 2 protein; FNI 93.8 0.2 6.9E-06 42.9 8.3 35 288-322 77-116 (121)
123 1x5y_A Myosin binding protein 93.8 0.25 8.5E-06 41.9 8.7 72 212-306 8-85 (111)
124 2crm_A Fibronectin type-III do 93.7 0.11 3.9E-06 44.7 6.4 35 288-322 76-114 (120)
125 2cum_A Tenascin-X; hexabrachio 93.7 0.9 3.1E-05 38.2 12.1 84 213-321 8-96 (105)
126 3n06_B PRL-R, prolactin recept 93.6 0.51 1.7E-05 44.7 11.6 87 212-321 102-204 (210)
127 2ocf_D Fibronectin; estrogen r 93.5 0.5 1.7E-05 41.3 10.4 72 213-307 29-102 (121)
128 1k85_A Chitinase A1; fibronect 93.5 0.62 2.1E-05 37.6 10.3 67 213-306 4-70 (88)
129 1bpv_A Titin, A71, connectin; 93.5 0.27 9.3E-06 42.4 8.5 19 288-306 69-87 (112)
130 3p4l_A Neogenin; iron homeosta 93.4 0.74 2.5E-05 43.3 12.3 86 213-322 5-103 (211)
131 3qht_C Monobody YSMB-1; fibron 93.4 0.3 1E-05 40.5 8.4 71 213-306 5-77 (97)
132 1qr4_A Protein (tenascin); fib 93.3 0.79 2.7E-05 42.2 12.1 95 212-332 6-105 (186)
133 1fnf_A Fibronectin; RGD, extra 93.3 4.8 0.00016 41.0 19.3 99 213-335 186-289 (368)
134 3k2m_C Monobody HA4; engineere 93.3 0.36 1.2E-05 40.5 8.8 70 214-306 6-79 (101)
135 2gee_A Hypothetical protein; f 93.3 1.1 3.7E-05 42.2 13.2 98 215-335 25-127 (203)
136 1uey_A KIAA0343 protein; immun 93.3 0.51 1.8E-05 40.9 10.1 89 212-322 16-114 (127)
137 3p4l_A Neogenin; iron homeosta 93.2 0.59 2E-05 44.0 11.2 88 215-321 108-204 (211)
138 1eer_B Epobp, erythropoietin r 93.1 0.42 1.4E-05 46.3 10.2 86 213-320 122-222 (227)
139 1wfn_A Sidekick 2; FN3, cell a 93.1 0.49 1.7E-05 40.4 9.5 72 212-306 17-93 (119)
140 3f7q_A Integrin beta-4, GP150; 92.9 1.1 3.8E-05 43.0 12.9 99 213-335 6-112 (234)
141 2vkw_A Neural cell adhesion mo 92.9 1.1 3.9E-05 41.9 12.7 71 212-306 109-184 (209)
142 1axi_B HGHBP, growth hormone r 92.4 0.95 3.3E-05 44.2 11.8 86 212-320 130-234 (236)
143 3t04_D Monobody 7C12; engineer 92.4 0.28 9.5E-06 41.4 6.9 71 213-306 8-83 (103)
144 3l5i_A Interleukin-6 receptor 92.1 0.86 2.9E-05 45.0 11.2 34 288-321 254-290 (290)
145 2ic2_A CG9211-PA, GH03927P; IH 92.1 0.71 2.4E-05 39.8 9.2 22 285-306 69-90 (115)
146 2q7n_A Leukemia inhibitory fac 92.0 0.38 1.3E-05 52.8 9.1 129 173-322 346-487 (488)
147 2cui_A Tenascin-X; fibronectin 92.0 0.67 2.3E-05 40.0 8.9 90 213-323 9-109 (112)
148 1j8k_A Fibronectin; EDA, TYPEI 91.9 1.1 3.6E-05 36.6 9.7 69 215-306 4-74 (94)
149 1tdq_A Tenascin-R; extracellul 91.6 1.8 6.2E-05 42.5 12.9 100 212-335 14-118 (283)
150 2yux_A Myosin-binding protein 91.6 0.4 1.4E-05 41.3 7.0 72 212-307 17-94 (120)
151 1n26_A IL-6 receptor alpha cha 91.5 1.9 6.5E-05 43.8 13.3 86 212-319 196-295 (325)
152 2qbw_A PDZ-fibronectin fusion 91.4 0.86 3E-05 43.0 9.8 70 214-306 105-176 (195)
153 3lpw_A A77-A78 domain from tit 91.4 1.5 5.3E-05 40.0 11.4 70 212-306 102-177 (197)
154 3lpw_A A77-A78 domain from tit 91.3 1.2 4.1E-05 40.8 10.6 71 212-306 5-81 (197)
155 3r8q_A Fibronectin; heparin, F 91.3 2.2 7.5E-05 42.2 13.2 100 213-335 21-126 (290)
156 3t1w_A Four-domain fibronectin 91.2 2.8 9.7E-05 42.9 14.5 72 212-306 277-350 (375)
157 3e0g_A Leukemia inhibitory fac 91.2 0.36 1.2E-05 53.0 7.7 127 174-322 342-482 (483)
158 3up1_A Interleukin-7 receptor 91.1 1.5 5E-05 42.9 11.3 89 212-323 112-216 (223)
159 2ha1_A Fibronectin; beta sandw 90.9 0.74 2.5E-05 43.1 8.8 85 215-320 2-92 (201)
160 3mpc_A FN3-like protein; fibro 90.9 1.2 4.2E-05 37.7 9.3 72 212-306 4-76 (103)
161 3mtr_A N-CAM-1, NCAM-1, neural 90.8 1.5 5.2E-05 41.1 11.0 37 288-324 174-214 (215)
162 1v5j_A KIAA1355 protein, RSGI 90.8 0.65 2.2E-05 39.9 7.5 86 213-322 8-102 (108)
163 2h41_A Fibronectin; beta sandw 90.7 0.26 8.9E-06 41.5 4.7 62 224-306 15-78 (95)
164 1zlg_A Anosmin 1; insulin-like 90.5 8.8 0.0003 43.4 18.9 37 286-322 333-376 (680)
165 2ekj_A Collagen alpha-1(XX) ch 90.3 0.24 8.1E-06 41.8 4.2 72 212-306 7-80 (105)
166 2lfe_A E3 ubiquitin-protein li 90.2 0.32 1.1E-05 42.6 4.8 40 69-108 33-73 (138)
167 1fnf_A Fibronectin; RGD, extra 90.1 2.5 8.7E-05 43.1 12.8 72 212-306 275-348 (368)
168 1wfu_A Unnamed protein product 89.8 0.32 1.1E-05 42.8 4.7 35 288-322 76-114 (120)
169 1oww_A FN, fibronectin first t 89.6 1.3 4.5E-05 36.9 7.8 84 215-319 7-96 (98)
170 2edb_A Netrin receptor DCC; tu 89.5 1.2 4E-05 38.2 8.2 68 213-306 18-90 (116)
171 1x5i_A Neogenin; RGM binding, 88.9 1.7 5.8E-05 37.8 8.9 68 213-306 28-100 (126)
172 3tgx_A Interleukin-21 receptor 88.2 1.1 3.8E-05 43.2 7.8 91 212-323 100-210 (219)
173 1cfb_A Drosophila neuroglian; 88.1 2.7 9.3E-05 39.1 10.4 86 213-322 6-102 (205)
174 3bpo_C Interleukin-13 receptor 87.9 5.4 0.00018 40.1 13.2 97 212-320 199-311 (314)
175 3f7q_A Integrin beta-4, GP150; 87.8 0.84 2.9E-05 43.9 6.7 92 213-322 99-200 (234)
176 3t1w_A Four-domain fibronectin 87.5 5 0.00017 41.0 12.9 94 213-330 187-286 (375)
177 3l5h_A Interleukin-6 receptor 86.5 0.81 2.8E-05 50.5 6.4 92 212-322 198-301 (589)
178 2gys_A Cytokine receptor commo 86.5 7.8 0.00027 40.8 14.0 99 212-333 108-227 (419)
179 3v6o_A Leptin receptor; recept 86.4 3.7 0.00012 38.9 10.2 73 212-306 109-186 (206)
180 2ibg_A CG9211-PA, GH03927P; IH 85.9 2.5 8.4E-05 39.6 8.7 22 285-306 68-89 (214)
181 3csg_A MBP, maltose-binding pr 84.8 2 6.9E-05 46.1 8.4 71 214-307 371-444 (461)
182 2v5y_A Receptor-type tyrosine- 83.7 6 0.00021 45.0 12.2 89 214-321 361-459 (731)
183 1uen_A KIAA0343 protein; immun 83.5 1.1 3.8E-05 38.2 4.6 36 287-322 80-119 (125)
184 3uto_A Twitchin; kinase, muscl 82.8 3.5 0.00012 46.0 9.4 77 212-313 9-92 (573)
185 2ha1_A Fibronectin; beta sandw 82.5 5.8 0.0002 36.7 9.6 20 287-306 165-184 (201)
186 3flo_A DNA polymerase alpha su 82.0 2.6 8.8E-05 45.6 7.6 80 326-414 146-247 (460)
187 2erj_C Cytokine receptor commo 81.8 6.2 0.00021 38.8 9.9 85 213-322 137-234 (247)
188 2b5i_C Cytokine receptor commo 81.5 5.9 0.0002 37.2 9.3 83 213-320 99-194 (199)
189 4go6_B HCF C-terminal chain 1; 81.5 5.6 0.00019 38.3 9.4 33 290-322 166-202 (232)
190 2w1n_A O-GLCNACASE NAGJ; hexos 81.2 7.1 0.00024 37.9 9.5 67 213-306 151-219 (238)
191 1cfb_A Drosophila neuroglian; 80.0 6.6 0.00023 36.3 9.1 34 287-320 164-202 (205)
192 2jll_A NCAM2, neural cell adhe 78.8 19 0.00064 36.5 12.9 86 213-322 196-291 (389)
193 1iar_B Protein (interleukin-4 78.8 5.3 0.00018 37.9 8.0 90 212-322 97-201 (207)
194 3l5i_A Interleukin-6 receptor 75.9 58 0.002 31.4 15.1 60 229-306 115-176 (290)
195 1wj3_A KIAA1496 protein; beta 75.6 7.4 0.00025 33.2 7.3 33 288-321 74-110 (117)
196 3fl7_A Ephrin receptor; ATP-bi 74.4 13 0.00043 41.2 10.5 43 287-330 400-449 (536)
197 2gys_A Cytokine receptor commo 73.6 10 0.00035 39.9 9.3 32 288-319 378-418 (419)
198 2dtg_E Insulin receptor; IR ec 72.8 5.2 0.00018 47.1 7.3 36 287-322 549-593 (897)
199 3s98_A Interferon alpha/beta r 66.6 17 0.0006 36.4 8.9 34 288-321 160-199 (306)
200 3l5h_A Interleukin-6 receptor 65.2 2.4 8.1E-05 46.6 2.1 33 288-320 553-588 (589)
201 1zlg_A Anosmin 1; insulin-like 65.1 21 0.0007 40.3 10.0 32 288-319 224-260 (680)
202 1noa_A Neocarzinostatin; antib 64.4 7.4 0.00025 33.5 4.5 34 72-106 4-37 (113)
203 4go6_B HCF C-terminal chain 1; 64.0 5.7 0.00019 38.3 4.4 34 288-321 47-84 (232)
204 2mcm_A Macromomycin; apoprotei 63.7 6.9 0.00023 33.6 4.2 34 72-106 3-36 (112)
205 3lb6_C IL-13, interleukin-13 r 61.8 1.7 6E-05 45.6 0.2 83 212-322 237-336 (380)
206 2uvf_A Exopolygalacturonase; G 58.9 33 0.0011 38.4 10.0 99 213-322 35-153 (608)
207 4doh_B Interleukin-20 receptor 54.6 37 0.0013 31.9 8.3 83 214-321 111-200 (206)
208 3se4_A Interferon alpha/beta r 54.3 54 0.0019 34.1 10.4 34 288-321 164-203 (414)
209 1g5b_A Serine/threonine protei 54.0 10 0.00035 36.1 4.2 16 526-541 176-191 (221)
210 4doh_R Interleukin-20 receptor 51.8 15 0.00051 35.3 5.0 36 288-323 174-215 (221)
211 1bqu_A Protein (GP130); cytoki 50.6 15 0.00051 34.1 4.7 70 213-306 8-82 (215)
212 1q38_A Fibronectin; amyloid fi 49.0 5.6 0.00019 32.2 1.1 23 284-306 35-57 (89)
213 2nzi_A Titin; IG-domain, FNIII 48.4 73 0.0025 30.7 9.7 19 288-306 255-273 (305)
214 2v5y_A Receptor-type tyrosine- 48.3 1.6E+02 0.0054 33.0 13.7 35 288-322 317-357 (731)
215 1akp_A Apokedarcidin; antibiot 46.9 7.7 0.00026 33.4 1.7 45 72-117 4-48 (114)
216 3lqm_A Interleukin-10 receptor 42.3 21 0.00072 33.4 4.3 35 288-322 156-196 (201)
217 1i1r_A GP130, interleukin-6 re 40.4 25 0.00084 34.7 4.7 70 213-306 104-178 (303)
218 1acx_A Actinoxanthin; antibact 31.6 33 0.0011 29.1 3.2 20 72-91 3-22 (108)
219 3n06_B PRL-R, prolactin recept 30.5 1.2E+02 0.004 27.7 7.5 87 213-319 4-97 (210)
220 3b4n_A Endo-pectate lyase; pec 26.2 1.3E+02 0.0043 30.9 6.9 18 289-306 73-90 (344)
221 1cd9_B G-CSF-R, protein (G-CSF 24.8 2.8E+02 0.0097 25.0 9.1 92 213-319 5-103 (215)
222 2dtg_E Insulin receptor; IR ec 22.8 22 0.00074 41.7 0.7 35 288-323 852-890 (897)
223 3s98_A Interferon alpha/beta r 20.7 92 0.0032 30.9 4.9 84 215-319 6-96 (306)
No 1
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=100.00 E-value=2.9e-58 Score=504.83 Aligned_cols=383 Identities=26% Similarity=0.427 Sum_probs=301.2
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeC-CC-CCcEEEEecCCCccc----ceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSG-DK-EPQQVEYGDDGKTQT----SEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~-~~-~~~~V~yg~~g~~~~----~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
+++.|.|+||++++++.++|+|+|+|. +. +.+.|+|++.+.... +..++|... -..+++
T Consensus 21 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 85 (426)
T 1xzw_A 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYY---------------NYTSAF 85 (426)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEET---------------TEECCE
T ss_pred CCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEec---------------CCcCCE
Confidence 467899999999998789999999998 54 778999997654221 112222211 123589
Q ss_pred EEEEEecCCCCCcEEEEEEccCCCccceeeEEECCCCCCC-CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHh
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGS-DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEV 364 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~-~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i 364 (639)
+|+|+|+||+|||+|+|||+++ .||+.++|+|+|.+++ .++||+++||+|... ....+++++.+.
T Consensus 86 ~~~v~l~gL~p~t~Y~Yrv~~g--~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~-----------~~~~~l~~i~~~- 151 (426)
T 1xzw_A 86 IHHCTIKDLEYDTKYYYRLGFG--DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTH-----------DSNTTLTHYEQN- 151 (426)
T ss_dssp EEEEEECCCCTTCEEEEEECCG--GGCEEEEEECCCCCCTTCCEEEEEECSCTTBH-----------HHHHHHHHHHHC-
T ss_pred EEEEEECCCCCCCEEEEEECCC--CccceeEEECCCCCCCCCCeEEEEEEeCCCCC-----------chHHHHHHHHhC-
Confidence 9999999999999999999974 5899999999997543 579999999998631 112334443321
Q ss_pred hcCCCcEEEEcCCccccCCc----HHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccC
Q 006591 365 NNGNVDSVFHIGDISYATGF----LVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFP 440 (639)
Q Consensus 365 ~~~~pDfVl~~GDl~y~~g~----~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~ 440 (639)
..+|||||++||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+..... . ...+....|..+|.
T Consensus 152 -~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f~ 223 (426)
T 1xzw_A 152 -SAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPD---I----GEYQPFVPFTNRYP 223 (426)
T ss_dssp -TTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGG---G----TBCSTTHHHHHHSC
T ss_pred -CCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCc---c----ccccCChhheEEEe
Confidence 1489999999999998765 4679999999999988999999999999864210 0 00122356788899
Q ss_pred CCCCC---CCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHH
Q 006591 441 MPTPS---KDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFV 517 (639)
Q Consensus 441 ~P~~~---~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r 517 (639)
||.++ .++.||+|++|+++||+||++.++..+.+|++||+++|+++++++++|+||++|+|+|+...........++
T Consensus 224 ~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r 303 (426)
T 1xzw_A 224 TPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMR 303 (426)
T ss_dssp CCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHH
T ss_pred CCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHH
Confidence 98642 346899999999999999998877778999999999999987778899999999999986542222335679
Q ss_pred HHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCC-ccccCCCCCCcEEEEeCCCCCCCC---CCCCCCC
Q 006591 518 KSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGI-DTYDHSNYTAPVHAIIGMAGFSLD---KFNKNNA 593 (639)
Q Consensus 518 ~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~-~~y~~~~~~gpv~iv~G~aG~~l~---~~~~~~~ 593 (639)
+.|+++|++++||++|+||+|.|+|++|++++++.. .+|. ..|. ++++|+||++|+||+... .+..++|
T Consensus 304 ~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~-----~~g~~~~~~--~~~g~~yi~~G~gG~~~~~~~~~~~~~p 376 (426)
T 1xzw_A 304 AIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNI-----VNAKCTPVS--DESAPVYITIGDGGNSEGLASEMTQPQP 376 (426)
T ss_dssp HHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCS-----TTCCCCCEE--CTTSCEEEEECCSCCTTCCCCCBCSSCC
T ss_pred HHHHHHHHHhCCCEEEEcChhhheeeeeecCccccc-----cCCcccccc--CCCccEEEEeCCCccccccccccCCCCC
Confidence 999999999999999999999999999999876421 1221 1122 357899999999998532 4545678
Q ss_pred CccceecccccEEEEEE-eCCEEEEEEEECCCCe--EEEEEEEEecCC
Q 006591 594 TWSLSRVAKFGYLRGHA-TKQEIQLEFVNADTRK--VEDSFRIIRRQI 638 (639)
Q Consensus 594 ~ws~~~~~~~Gy~~v~v-~~~~L~~e~~~~~dG~--v~D~f~I~k~~~ 638 (639)
+|++++...+||++|++ ++++|.++|+++.+|+ +.|+|+|.|.++
T Consensus 377 ~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~~ 424 (426)
T 1xzw_A 377 SYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRYW 424 (426)
T ss_dssp TTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSCC
T ss_pred CceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEeccc
Confidence 99999999999999999 7889999999888998 899999999875
No 2
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=100.00 E-value=2.9e-57 Score=496.57 Aligned_cols=382 Identities=26% Similarity=0.405 Sum_probs=296.4
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC-CCcEEEEecCCCccc----ceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK-EPQQVEYGDDGKTQT----SEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~~~~V~yg~~g~~~~----~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
+++.|.|+||++++++.++|+|+|+|.+. +.+.|+|++.+.... +.+++|... -..++++
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~---------------~~~~~~~ 79 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFF---------------NYSSGFI 79 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCS---------------SCBCCEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEec---------------CCCCCEE
Confidence 56789999999998878999999999764 678999997654221 122222211 1245899
Q ss_pred EEEEecCCCCCcEEEEEEccCCCccceeeEEECCCCCCC-CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGS-DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN 365 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~-~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~ 365 (639)
|+|+|+||+|||+|+|||+.+ +||+.++|+|+|.+++ .++||+++||+|... +...++ +.+.
T Consensus 80 ~~v~l~gL~p~t~Y~Yrv~~~--~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~-----------~~~~~l----~~~~ 142 (424)
T 2qfp_A 80 HHTTIRKLKYNTKYYYEVGLR--NTTRRFSFITPPQTGLDVPYTFGLIGDLGQSF-----------DSNTTL----SHYE 142 (424)
T ss_dssp EEEEECSCCTTCEEEEEECCS--SSCEEEEEECCCCCCTTCCEEEEEECSCTTBH-----------HHHHHH----HHHH
T ss_pred EEEEECCCCCCCEEEEEECCC--CccceEEEECCCCCCCCCCeEEEEEEeCCCCC-----------ChHHHH----HHHH
Confidence 999999999999999999986 5899999999997643 579999999999642 112223 3333
Q ss_pred c--CCCcEEEEcCCccccCCc----HHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCcccccccccc
Q 006591 366 N--GNVDSVFHIGDISYATGF----LVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYF 439 (639)
Q Consensus 366 ~--~~pDfVl~~GDl~y~~g~----~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f 439 (639)
+ .++||||++||++|+.+. ..+|+.|.+.++++.+.+|+|+++||||+.+... . ........|..+|
T Consensus 143 ~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f 215 (424)
T 2qfp_A 143 LSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE---I----NETEPFKPFSYRY 215 (424)
T ss_dssp TCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGG---G----TBCSTTHHHHHHC
T ss_pred hCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCc---c----cccccchhhhhhc
Confidence 3 389999999999998653 3579999999999888899999999999864210 0 0001134677788
Q ss_pred CCCCCC---CCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHH
Q 006591 440 PMPTPS---KDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFF 516 (639)
Q Consensus 440 ~~P~~~---~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~ 516 (639)
.||..+ ..+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+||++|+|+++...........+
T Consensus 216 ~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~ 295 (424)
T 2qfp_A 216 HVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAM 295 (424)
T ss_dssp CCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHH
T ss_pred cCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHH
Confidence 888642 35689999999999999999877666789999999999998777789999999999997653221223457
Q ss_pred HHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCC---CCCCCCC
Q 006591 517 VKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLD---KFNKNNA 593 (639)
Q Consensus 517 r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~---~~~~~~~ 593 (639)
++.|+++|++++||++|+||+|.|+|++|+++.+....+.. . ..| .++++|+||++|+||.... .+..++|
T Consensus 296 r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~---~-~~~--~~~~~~vyi~~G~gg~~~~~~~~~~~~~p 369 (424)
T 2qfp_A 296 RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGL---C-TPV--KDQSAPVYITIGDAGNYGVIDSNMIQPQP 369 (424)
T ss_dssp HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCC---C-SCE--ECTTSCEEEEECCSCTTSCCCCCBCSSCC
T ss_pred HHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCc---c-ccc--cCCCCcEEEEecCCCCccccCccCCCCCC
Confidence 88999999999999999999999999999987553221110 0 112 1357899999999998532 3445678
Q ss_pred CccceecccccEEEEEE-eCCEEEEEEEECCCCeE--EEEEEEEecCC
Q 006591 594 TWSLSRVAKFGYLRGHA-TKQEIQLEFVNADTRKV--EDSFRIIRRQI 638 (639)
Q Consensus 594 ~ws~~~~~~~Gy~~v~v-~~~~L~~e~~~~~dG~v--~D~f~I~k~~~ 638 (639)
+|++++...+||++|++ ++++|+++|+++.+|++ .|+|+|.|.++
T Consensus 370 ~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~~ 417 (424)
T 2qfp_A 370 EYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHW 417 (424)
T ss_dssp TTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTTT
T ss_pred CcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEeccc
Confidence 99999999999999999 78899999999899997 59999999875
No 3
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=2.7e-34 Score=321.98 Aligned_cols=361 Identities=17% Similarity=0.214 Sum_probs=226.5
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC----------CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCc
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK----------EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPG 284 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~----------~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g 284 (639)
.|....++.++...+++ |.|+.-.+ ....|+|............. .|.+...| +.+
T Consensus 7 ~~f~~GvasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~------~g~~~a~~-------~~~ 72 (527)
T 2yeq_A 7 YPFTLGVASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVR------KGTEMAKP-------SLA 72 (527)
T ss_dssp CSCTTCEEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEE------EEEEEECG-------GGT
T ss_pred CCccccccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceE------eeeEEecC-------CCc
Confidence 35556677887766664 88997643 23466665333222211111 00000012 236
Q ss_pred eEEEEEecCCCCCcEEEEEEccCCCccceeeEEECCCCCCC--CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHH
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGS--DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSD 362 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~--~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~ 362 (639)
++|+|.|+||+|||+|+|||+.++ .+|+.++|+|+|.+++ .+++|+++||.+... +....++.|
T Consensus 73 ~t~~v~v~gL~P~t~Y~Yr~~~~~-~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~-----------g~~~~~~~i-- 138 (527)
T 2yeq_A 73 HSVHVEADGLEPNKVYYYRFKTGH-ELSPVGKTKTLPAPGANVPQMTFAFASCQQYEH-----------GYYTAYKHM-- 138 (527)
T ss_dssp TEEEEEECSCCTTCEEEEEEEETT-EECCCEEEECCCCTTCCCCCEEEEEECCCCGGG-----------CCCHHHHHH--
T ss_pred eEEEeecCCcCCCCEEEEEEEeCC-CcCCCceEEcCCCCCCCCCCeEEEEEecCCCCC-----------CccHHHHHH--
Confidence 899999999999999999999865 5899999999998653 479999999988631 112344444
Q ss_pred HhhcCCCcEEEEcCCccccCCcH--------------------HH----HHHHH--HhhhhhhcCCceEEecCCCCcCCC
Q 006591 363 EVNNGNVDSVFHIGDISYATGFL--------------------VE----WDFFL--HQITPVASRVSYMTAIGNHERDYV 416 (639)
Q Consensus 363 ~i~~~~pDfVl~~GDl~y~~g~~--------------------~~----wd~f~--~~l~~l~~~vP~~~v~GNHD~~~~ 416 (639)
.+.++|||||+||++|+++.. .+ |..++ ..++.+.+.+|+|+++||||+..+
T Consensus 139 --a~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn 216 (527)
T 2yeq_A 139 --AKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENN 216 (527)
T ss_dssp --TTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTT
T ss_pred --HhcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCC
Confidence 346899999999999997532 11 22222 246677789999999999999643
Q ss_pred CCCCccCCCCCCCcc----cccccccc-CCCCC-------CCCCCeEEEEeCC-EEEEEEeCCCCC--------------
Q 006591 417 NSGSVYSTPDSGGEC----GIPYETYF-PMPTP-------SKDRPWYSIEQAS-VHFTVISTEHDW-------------- 469 (639)
Q Consensus 417 ~~~~~y~~~dsgge~----~~~y~~~f-~~P~~-------~~~~~~Ysfd~G~-v~fi~LDT~~~~-------------- 469 (639)
..+......+..+.. ..+++.+| .||.. .....||+|++|+ ++||+|||+...
T Consensus 217 ~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~ 296 (527)
T 2yeq_A 217 YANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSD 296 (527)
T ss_dssp CBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCH
T ss_pred CCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccc
Confidence 221110000000000 01233333 23321 2346899999999 999999997532
Q ss_pred --------CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCC--------C--chhHHHHHHHHHHHHhCCCe-
Q 006591 470 --------WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGF--------L--SVDKFFVKSVEPLLLKNKVD- 530 (639)
Q Consensus 470 --------~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~--------~--~~~~~~r~~l~~Ll~~y~Vd- 530 (639)
..+.+|++||+++|++ ++++|+||+.|+|++...... . ..-...|+.|+++|.+++|+
T Consensus 297 ~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n 373 (527)
T 2yeq_A 297 ESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNN 373 (527)
T ss_dssp HHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCC
T ss_pred cccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCC
Confidence 1479999999999996 568999999999998754210 0 11245689999999999994
Q ss_pred -EEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCC--C--CCCCCCCCC---CCCCccceeccc
Q 006591 531 -LVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGM--A--GFSLDKFNK---NNATWSLSRVAK 602 (639)
Q Consensus 531 -lvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~--a--G~~l~~~~~---~~~~ws~~~~~~ 602 (639)
++|+||+|.++++....+.. +.++ ...+.-+++++. + |........ ...++..+....
T Consensus 374 ~vvLsGDvH~~~~~~~~~~~~-------~p~~-------~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~~~~~~~~ 439 (527)
T 2yeq_A 374 VVVLTGDVHASWASNLHVDFE-------KTSS-------KIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDY 439 (527)
T ss_dssp EEEEECSSSSEEEEEEESSTT-------CTTS-------CEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTTEEEEEBC
T ss_pred EEEEEcchHHHhHhhcccccc-------CCCC-------CceEEEEEcCCeeCCCCcccchhhhhhhhhcCCcceeeeCC
Confidence 99999999999986321100 0000 000122232222 1 111100000 011222333468
Q ss_pred ccEEEEEEeCCEEEEEEEEC
Q 006591 603 FGYLRGHATKQEIQLEFVNA 622 (639)
Q Consensus 603 ~Gy~~v~v~~~~L~~e~~~~ 622 (639)
.||++|++++++++++|+..
T Consensus 440 ~Gy~~v~vt~~~~~~~~~~v 459 (527)
T 2yeq_A 440 RGYVRCTVTPHQWKADYRVM 459 (527)
T ss_dssp EEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEeccEEEEEEEEe
Confidence 89999999999999999874
No 4
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.9e-34 Score=306.11 Aligned_cols=263 Identities=18% Similarity=0.236 Sum_probs=192.0
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc----HHHHHHHHH-hhhhh--
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF----LVEWDFFLH-QITPV-- 398 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~----~~~wd~f~~-~l~~l-- 398 (639)
.+++|+++||+|.+. +....+.++|.+.+++.+|||||++||++|. |. ..+|.+.++ .++..
T Consensus 2 ~~l~f~~igD~g~g~----------~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~ 70 (342)
T 3tgh_A 2 CQLRFASLGDWGKDT----------KGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKG 70 (342)
T ss_dssp CCEEEEECCSCBSCC----------HHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGG
T ss_pred ceEEEEEEecCCCCC----------chHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhh
Confidence 469999999999642 1245677888888888999999999999998 53 345654333 33322
Q ss_pred hcCCceEEecCCCCcCCCCCC-Ccc-----CCCC----CCCccccccccccCCCCCCCCCCeEEE----Ee---------
Q 006591 399 ASRVSYMTAIGNHERDYVNSG-SVY-----STPD----SGGECGIPYETYFPMPTPSKDRPWYSI----EQ--------- 455 (639)
Q Consensus 399 ~~~vP~~~v~GNHD~~~~~~~-~~y-----~~~d----sgge~~~~y~~~f~~P~~~~~~~~Ysf----d~--------- 455 (639)
...+|+++++||||+..+... -.| ...+ ...........+|.||. .||+| ..
T Consensus 71 ~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~-----~yY~~~~~f~~~~~~~~~~~ 145 (342)
T 3tgh_A 71 DMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN-----YWYHYFTHFTVSSGPSIVKT 145 (342)
T ss_dssp TTCSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS-----SSEEEEEEEEEC--------
T ss_pred hhCCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc-----ceEEEEEEeecccccccccc
Confidence 357999999999998522100 000 0000 00000112345677874 57865 32
Q ss_pred C----CEEEEEEeCCCCCC----------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHH
Q 006591 456 A----SVHFTVISTEHDWW----------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVE 521 (639)
Q Consensus 456 G----~v~fi~LDT~~~~~----------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~ 521 (639)
| .++||+|||..... ...+|++||+++|+. ++|+||++|||+|+.+.. .....+++.|+
T Consensus 146 g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~ 218 (342)
T 3tgh_A 146 GHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS--RGSSYLAYYLL 218 (342)
T ss_dssp -CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--CCCHHHHHHTH
T ss_pred CCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--CCcHHHHHHHH
Confidence 3 39999999964321 235899999999953 479999999999987642 22356789999
Q ss_pred HHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecc
Q 006591 522 PLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVA 601 (639)
Q Consensus 522 ~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~ 601 (639)
+||++|+|+++|+||+|.|+|.++ .++.||++|++|....... ..++|+.++..
T Consensus 219 ~ll~~~~VdlvlsGH~H~~~~~~~-------------------------~g~~~iv~Ga~g~~~~~~~-~~~~~s~f~~~ 272 (342)
T 3tgh_A 219 PLLKDAEVDLYISGHDNNMEVIED-------------------------NDMAHITCGSGSMSQGKSG-MKNSKSLFFSS 272 (342)
T ss_dssp HHHHHTTCCEEEECSSSSEEEEEE-------------------------TTEEEEEECCSSCCCCCCS-SCCTTEEEEEC
T ss_pred HHHHHcCCCEEEECCCcceeEEee-------------------------CCcEEEEeCccccccccCC-CCCCcceeecC
Confidence 999999999999999999999853 2478999999987654322 34678888888
Q ss_pred cccEEEEEEeCCEEEEEEEECCCCeEEEEEEEEecC
Q 006591 602 KFGYLRGHATKQEIQLEFVNADTRKVEDSFRIIRRQ 637 (639)
Q Consensus 602 ~~Gy~~v~v~~~~L~~e~~~~~dG~v~D~f~I~k~~ 637 (639)
.+||.++++++++|+++|+++.+|+++|+|+|.|+.
T Consensus 273 ~~Gf~~l~v~~~~l~~~~~~~~~G~vld~~~i~k~~ 308 (342)
T 3tgh_A 273 DIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKK 308 (342)
T ss_dssp SSEEEEEEEETTEEEEEEEETTTTEEEEEEEEECCC
T ss_pred CCcEEEEEEECCEEEEEEEECCCCcEEEEEEEECCC
Confidence 999999999999999999986799999999999964
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.97 E-value=2.7e-30 Score=268.42 Aligned_cols=261 Identities=25% Similarity=0.351 Sum_probs=180.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHH-HHHHHhhhhhh----c
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEW-DFFLHQITPVA----S 400 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~w-d~f~~~l~~l~----~ 400 (639)
++++|+++||+|...... +.......+.+.|.+.+++.+|||||++||++|..+....+ .+|.+.++.+. .
T Consensus 5 ~~~~~~~isD~h~~~~~~----~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l 80 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAP----FHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSL 80 (313)
T ss_dssp CCEEEEEECSCCCCSSTT----SSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGG
T ss_pred CceEEEEEcccCCCCCcc----ccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhh
Confidence 579999999999864321 11112234555665556667899999999999875432211 13334443322 2
Q ss_pred -CCceEEecCCCCcCCCCCCCccCCCCCCCcccccc---ccccCCCCCCCCCCeEEEEe------CCEEEEEEeCCCC--
Q 006591 401 -RVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPY---ETYFPMPTPSKDRPWYSIEQ------ASVHFTVISTEHD-- 468 (639)
Q Consensus 401 -~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y---~~~f~~P~~~~~~~~Ysfd~------G~v~fi~LDT~~~-- 468 (639)
.+|+++++||||+..+.. ....| ..+|.+| ..||++++ ++++||+||+...
T Consensus 81 ~~~p~~~v~GNHD~~~~~~------------~~~~~~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~lds~~~~~ 143 (313)
T 1ute_A 81 RNVPWHVLAGNHDHLGNVS------------AQIAYSKISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCG 143 (313)
T ss_dssp TTCCEEECCCHHHHHSCHH------------HHHHGGGTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHC
T ss_pred cCCCEEEECCCCccCCCcc------------ccccccccCCCccCc-----ccceEEEEecCCCCceEEEEEEEChHHhC
Confidence 789999999999842110 00011 1234444 35889888 5899999998641
Q ss_pred ---------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEE
Q 006591 469 ---------------WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVL 533 (639)
Q Consensus 469 ---------------~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~Vdlvl 533 (639)
...+.+|++||++.|++. +.+|+|+++|+|++..... .....+++.|.++|++++|+++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l 218 (313)
T 1ute_A 144 NSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYL 218 (313)
T ss_dssp CGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEE
T ss_pred cCccccccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEE
Confidence 113579999999999975 3489999999999876542 22345678999999999999999
Q ss_pred eCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCC---CCCCCccceec----ccccEE
Q 006591 534 FGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFN---KNNATWSLSRV----AKFGYL 606 (639)
Q Consensus 534 sGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~---~~~~~ws~~~~----~~~Gy~ 606 (639)
+||+|.+++..+ ..++.||++|++|....... .....+..+.. ..+||.
T Consensus 219 ~GH~H~~~~~~~------------------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~ 274 (313)
T 1ute_A 219 CGHDHNLQYLQD------------------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFA 274 (313)
T ss_dssp ECSSSSEEEEEC------------------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEE
T ss_pred ECChhhhhhccC------------------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceE
Confidence 999999998742 13568999999886322110 00122333322 237999
Q ss_pred EEEEeCCEEEEEEEECCCCeEEEEEEEEecC
Q 006591 607 RGHATKQEIQLEFVNADTRKVEDSFRIIRRQ 637 (639)
Q Consensus 607 ~v~v~~~~L~~e~~~~~dG~v~D~f~I~k~~ 637 (639)
+|++++++++++++.. +|+++|+|+|.|+.
T Consensus 275 ~l~v~~~~~~~~~~~~-~g~~~~~~~l~~~~ 304 (313)
T 1ute_A 275 YVEITPKEMSVTYIEA-SGKSLFKTKLPRRA 304 (313)
T ss_dssp EEEECSSCEEEEEEET-TSCEEEEEEECCCC
T ss_pred EEEEEcCEEEEEEEcC-CCcEEEEEEecccc
Confidence 9999999999999985 99999999999875
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.91 E-value=3e-23 Score=217.68 Aligned_cols=251 Identities=16% Similarity=0.167 Sum_probs=170.5
Q ss_pred CCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhc--
Q 006591 325 SDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQITPVAS-- 400 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~-- 400 (639)
...+||++++|+|....... .+........++++++.+.+ .++|+|+++||+++. +...+|+.+.+.++.+..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~--~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~l~~~~ 99 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRR--LYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK-GEPAAYRKLRGLVEPFAAQL 99 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCC--BTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCcc--cccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHHHHhhc
Confidence 36799999999998654321 11112245677888888776 799999999999964 556677777777777643
Q ss_pred CCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC----CCCCHHHH
Q 006591 401 RVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD----WWLNSEQY 476 (639)
Q Consensus 401 ~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~----~~~g~~Q~ 476 (639)
.+|+++++||||+.. .+...+..........+|++++++++|++||+... .....+|+
T Consensus 100 ~~pv~~v~GNHD~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~ 161 (330)
T 3ib7_A 100 GAELVWVMGNHDDRA------------------ELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQL 161 (330)
T ss_dssp TCEEEECCCTTSCHH------------------HHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHH
T ss_pred CCCEEEeCCCCCCHH------------------HHHHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHH
Confidence 789999999999731 12222211111123568999999999999998753 24578999
Q ss_pred HHHHHHHhhccCCCCCeEEEEeccCCccCCCCC-CchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCC
Q 006591 477 KWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGF-LSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIP 555 (639)
Q Consensus 477 ~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~-~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~ 555 (639)
+||++.|+.... ..+|+++|||++...... .......++.+.+++++++|+++|+||+|..+... .
T Consensus 162 ~wl~~~l~~~~~---~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~--~-------- 228 (330)
T 3ib7_A 162 GWLAEELATPAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--F-------- 228 (330)
T ss_dssp HHHHHHTTSCCT---TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE--E--------
T ss_pred HHHHHHHHhccc---CCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce--E--------
Confidence 999999997532 237888999987654211 11111225788999999999999999999987532 0
Q ss_pred ccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCe
Q 006591 556 TKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRK 626 (639)
Q Consensus 556 ~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~ 626 (639)
++..+++.|+.+...... .............||..|+++++.+.++++....+.
T Consensus 229 ---------------~g~~~~~~gs~~~~~~~~--~~~g~~~~~~~~~gy~iv~i~~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 229 ---------------VGIPVSVASATCYTQDLT--VAAGGTRGRDGAQGCNLVHVYPDTVVHSVIPLGGGE 282 (330)
T ss_dssp ---------------TTEEEEECCCSSCEECTT--SCTTCCCEESCSCEEEEEEECSSCEEEEEEECSCCC
T ss_pred ---------------CCEEEEecCcceeccCCC--CCCcceeccCCCCceEEEEEECCCeEEEEeccCCCC
Confidence 234566677766432211 011112222345789999999999999999854443
No 7
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.88 E-value=5e-22 Score=206.55 Aligned_cols=239 Identities=14% Similarity=0.146 Sum_probs=156.9
Q ss_pred CceEEEEEecCCCCCCCCCCc------cccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc-----HHHHHHHHHh
Q 006591 326 DEMKFLAYGDMGKAPRDASTE------HYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF-----LVEWDFFLHQ 394 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~------~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~-----~~~wd~f~~~ 394 (639)
..+||++++|+|......... .+ .......++++++.+.+.+||+|+++||+++.... ...++.+.+.
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRY-YRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEEC-TTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHH-HHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 579999999999875432100 00 01123566777777767899999999999975321 2334444555
Q ss_pred hhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccC-------------CCCCCCCCCeEEEEe-CCEEE
Q 006591 395 ITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFP-------------MPTPSKDRPWYSIEQ-ASVHF 460 (639)
Q Consensus 395 l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~-------------~P~~~~~~~~Ysfd~-G~v~f 460 (639)
++.+ .+|+++++||||..... . ..+.+.+. +|. .+..||+|+. ++++|
T Consensus 83 l~~~--~~p~~~v~GNHD~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~y~~~~~~~~~~ 144 (322)
T 2nxf_A 83 LDAC--SVDVHHVWGNHEFYNFS-R-------------PSLLSSRLNSAQRTGTDTGSDLIG--DDIYAYEFSPAPNFRF 144 (322)
T ss_dssp HHTT--CSEEEECCCHHHHHHCC-H-------------HHHHTSTTCCCC------CEECGG--GTCCCEEEEEETTEEE
T ss_pred HHhc--CCcEEEecCCCCcccCC-H-------------HHHhhhhCCcccccccccccccCC--CCceEEEEecCCCEEE
Confidence 4442 68999999999983100 0 01111111 222 1356899998 99999
Q ss_pred EEEeCCCC----------------------------------------------CCCCHHHHHHHHHHHhhccCCCCCeE
Q 006591 461 TVISTEHD----------------------------------------------WWLNSEQYKWIQKDLASVDRSKTPWL 494 (639)
Q Consensus 461 i~LDT~~~----------------------------------------------~~~g~~Q~~WL~~~La~~~r~~~pwv 494 (639)
|+||+... .....+|++||++.|+++.+. ..++
T Consensus 145 i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~ 223 (322)
T 2nxf_A 145 VLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERV 223 (322)
T ss_dssp EECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEE
T ss_pred EEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcE
Confidence 99998641 113489999999999986421 3468
Q ss_pred EEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCc
Q 006591 495 IFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAP 573 (639)
Q Consensus 495 IV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gp 573 (639)
||++|+|++........ ....++.+.+++.++ +|+++|+||+|.+++... . .+.
T Consensus 224 iv~~H~p~~~~~~~~~~-~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-------------~-----------~g~ 278 (322)
T 2nxf_A 224 LIFSHLPVHPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-------------S-----------SGA 278 (322)
T ss_dssp EEEESSCCCTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-------------T-----------TSC
T ss_pred EEEEccCCCCCCCCccc-cccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec-------------c-----------CCc
Confidence 99999999876531100 011257889999999 899999999999988631 1 234
Q ss_pred EEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECC
Q 006591 574 VHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNAD 623 (639)
Q Consensus 574 v~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~ 623 (639)
.+++.|+.- .. .....||..++++++.++++.+...
T Consensus 279 ~~i~~~~~~---~~-----------~~~~~~y~~v~~~~~~~~~~~~~~~ 314 (322)
T 2nxf_A 279 QHITLEGVI---ET-----------PPHSHAFATAYLYEDRMVMKGRGRV 314 (322)
T ss_dssp EEEECCCGG---GC-----------CTTSCEEEEEEECSSEEEEEEEETS
T ss_pred eEEEecchh---hC-----------CCCCCcEEEEEEECCeEEEEecccc
Confidence 466655441 10 0134689999999999999988643
No 8
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.88 E-value=1.8e-21 Score=198.60 Aligned_cols=243 Identities=12% Similarity=0.085 Sum_probs=159.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC--CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG--NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+||++++|+|....... .+........++++++.+++. ++|+|+++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 mri~~iSD~H~~~~~~~--~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~l--~~p~~ 75 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEK--LYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNC-GRPEEYQVARQILGSL--NYPLY 75 (274)
T ss_dssp CEEEEECCCCBCSTTCC--BTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS-CCHHHHHHHHHHHTTC--SSCEE
T ss_pred CEEEEEecCCcCCCCcc--cccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhc--CCCEE
Confidence 58999999998743211 011012345677787777654 68999999999964 4556677777777765 68999
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCcccccccc-ccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC----CCCCHHHHHHHH
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYET-YFPMPTPSKDRPWYSIEQASVHFTVISTEHD----WWLNSEQYKWIQ 480 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~-~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~----~~~g~~Q~~WL~ 480 (639)
+++||||..... ...+.. ++..+.+ .+..+|+++.++++|++||+... .....+|++||+
T Consensus 76 ~v~GNHD~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~ 140 (274)
T 3d03_A 76 LIPGNHDDKALF--------------LEYLQPLCPQLGSD-ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLE 140 (274)
T ss_dssp EECCTTSCHHHH--------------HHHHGGGSGGGCSC-GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHH
T ss_pred EECCCCCCHHHH--------------HHHhhhhhcCcccC-CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHH
Confidence 999999973110 011111 1111211 02357899999999999998753 245789999999
Q ss_pred HHHhhccCCCCCeEEEEeccCCccCCCCC-CchhHHHHHHHHHHHHhC-CCeEEEeCcccccceeecccCCeecCCCccC
Q 006591 481 KDLASVDRSKTPWLIFAGHRPMYSSLDGF-LSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTCSVFRNKCMGIPTKD 558 (639)
Q Consensus 481 ~~La~~~r~~~pwvIV~~H~P~y~~~~~~-~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d 558 (639)
+.|++. +..++|+++|+|++...... ........+.+.++++++ +|+++|+||+|.++... +
T Consensus 141 ~~l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--~----------- 204 (274)
T 3d03_A 141 AQLFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ--Y----------- 204 (274)
T ss_dssp HHHHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE--E-----------
T ss_pred HHHHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe--E-----------
Confidence 999974 24579999999998754311 111111256788999999 89999999999987642 0
Q ss_pred CCCCccccCCCCCCcEEEEeCC-CCCCCCCCCCCCCCcc-ceecccccEEEEEEeCCEEEEEEEEC
Q 006591 559 DNGIDTYDHSNYTAPVHAIIGM-AGFSLDKFNKNNATWS-LSRVAKFGYLRGHATKQEIQLEFVNA 622 (639)
Q Consensus 559 ~~G~~~y~~~~~~gpv~iv~G~-aG~~l~~~~~~~~~ws-~~~~~~~Gy~~v~v~~~~L~~e~~~~ 622 (639)
.+..+++.++ ++... .. .+.+. .......||..+++++++++++++..
T Consensus 205 ------------~g~~~~~~pg~~~~~~--~~--~~~~~~~~~~~~~gy~i~~i~~~~~~~~~~~~ 254 (274)
T 3d03_A 205 ------------RQALISTLPGTVHQVP--YC--HADTDPYYDLSPASCLMHRQVGEQWVSYQHSL 254 (274)
T ss_dssp ------------TTEEEEECCCSSCBCC--CC--SSCCSCEEBCCCCEEEEEEEETTEEEEEEEEC
T ss_pred ------------CCEEEEEcCCcceeec--cC--CCccccccccCCCceEEEEEeCCcEEEEEEec
Confidence 1222444433 33321 11 11221 23344679999999999999999875
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.79 E-value=3.1e-18 Score=187.78 Aligned_cols=216 Identities=14% Similarity=0.165 Sum_probs=135.5
Q ss_pred CCceEEEEEecCCCCCCCCC--Cccc----------cCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHH
Q 006591 325 SDEMKFLAYGDMGKAPRDAS--TEHY----------IQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFL 392 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~--~~~~----------~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~ 392 (639)
...+||++++|+|.+..... ...+ ........++++++.+++.+||+|+++||+++. +...+++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN-GEKTSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS-CCHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHH
Confidence 36799999999998642100 0000 000125667788887777889999999999965 4445667676
Q ss_pred Hhhhhhh-cCCceEEecCCCCcCCCCCCCccCCCC---CCCccccccccccCCCCC------C-CCCCeEEEEeCCEEEE
Q 006591 393 HQITPVA-SRVSYMTAIGNHERDYVNSGSVYSTPD---SGGECGIPYETYFPMPTP------S-KDRPWYSIEQASVHFT 461 (639)
Q Consensus 393 ~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~y~~~d---sgge~~~~y~~~f~~P~~------~-~~~~~Ysfd~G~v~fi 461 (639)
+.++.+. ..+|+++++||||+..... ..+.... ........|.+.|..... . ....|+.+..++++|+
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWA-RKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTC-EEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccc-cccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 6666654 3789999999999853211 0000000 000001123333331110 0 0123444558899999
Q ss_pred EEeCCCC------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCC-CchhHHHHHHHHHHHHhCC
Q 006591 462 VISTEHD------------WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGF-LSVDKFFVKSVEPLLLKNK 528 (639)
Q Consensus 462 ~LDT~~~------------~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~-~~~~~~~r~~l~~Ll~~y~ 528 (639)
+||+... .....+|++||++.|+.+.+. ...+|+++|+|++...... .......++.+.+++++++
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~-~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~ 273 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKN-GAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGA 273 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHT-TCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTT
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHc-CCeEEEEECCCCcccccccccccccccHHHHHHHHHHcC
Confidence 9998742 235689999999999876432 3458999999997654211 1111123578889999999
Q ss_pred CeEEEeCccccccee
Q 006591 529 VDLVLFGHVHNYERT 543 (639)
Q Consensus 529 VdlvlsGH~H~YeRt 543 (639)
|+++|+||+|.....
T Consensus 274 v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 274 MDFSLSGHIHTQNIR 288 (443)
T ss_dssp CCEEEECSSCSCEEE
T ss_pred CeEEEECCcccCchh
Confidence 999999999997754
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.52 E-value=9.1e-14 Score=137.17 Aligned_cols=170 Identities=12% Similarity=-0.002 Sum_probs=103.9
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
.+||+++||+|.. ...++++++.+.+.++|+|+++||+++......++..+++.++.+ ..|+++
T Consensus 5 ~mri~~iSD~H~~--------------~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~ 68 (228)
T 1uf3_A 5 VRYILATSNPMGD--------------LEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAY 68 (228)
T ss_dssp CCEEEEEECCTTC--------------HHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEE
T ss_pred eEEEEEEeeccCC--------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEE
Confidence 5899999999964 234566666665568999999999996543455555666666543 679999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCcccccccccc----CCCCCC-CCCCeEEEEeC-CEEEEEEeCCC--CCCCC------
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYF----PMPTPS-KDRPWYSIEQA-SVHFTVISTEH--DWWLN------ 472 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f----~~P~~~-~~~~~Ysfd~G-~v~fi~LDT~~--~~~~g------ 472 (639)
++||||.... ..+...+ ..|... ..+ ..+.++ +++|+.++... .+...
T Consensus 69 v~GNHD~~~~----------------~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 130 (228)
T 1uf3_A 69 VPGPQDAPIW----------------EYLREAANVELVHPEMRNVHE--TFTFWRGPYLVAGVGGEIADEGEPEEHEALR 130 (228)
T ss_dssp ECCTTSCSHH----------------HHHHHHHHHHHHCTTEEECBT--SEEEETTTEEEEEECSEEESSSCCBSSSSCE
T ss_pred ECCCCCchhH----------------HHHHhhhhhhccCcceEEccc--ceEeeCCCcEEecCCCCcCCCCccChhhccc
Confidence 9999997310 0011110 001000 001 134556 88899887421 11112
Q ss_pred --HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccc
Q 006591 473 --SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVH 538 (639)
Q Consensus 473 --~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H 538 (639)
..+.+|+++.|++.. ..+.|++.|+|++.......+ .+.+.+++++++++++++||+|
T Consensus 131 ~~~~~~~~~~~~l~~~~---~~~~il~~H~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 131 YPAWVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQG-----SHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp EEHHHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTTS-----BHHHHHHHHHHCCSEEEECCSS
T ss_pred chhhhHHHHHHHHHhCC---CCCeEEEEccCcccCCccccC-----HHHHHHHHHHhCCCEEEEcccc
Confidence 223344555565532 235899999999764211111 2356677888899999999999
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.48 E-value=1.4e-13 Score=139.23 Aligned_cols=184 Identities=11% Similarity=0.082 Sum_probs=98.6
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHH------------------
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVE------------------ 387 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~------------------ 387 (639)
..+||+++||+|... ..++++++.++..++|+|+++||+++.......
T Consensus 4 ~~mri~~iSDlH~~~--------------~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~ 69 (260)
T 2yvt_A 4 MPRKVLAIKNFKERF--------------DLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHE 69 (260)
T ss_dssp CCCEEEEEECCTTCG--------------GGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHH
T ss_pred ceEEEEEEeecCCCh--------------HHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhH
Confidence 358999999999752 124556666655689999999999964321100
Q ss_pred -----HHHHHHhhhhhhc-CCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEE
Q 006591 388 -----WDFFLHQITPVAS-RVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFT 461 (639)
Q Consensus 388 -----wd~f~~~l~~l~~-~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi 461 (639)
.+.+.+.++.+.. ..|+++++||||..... + ....+...-..|....-.....+++++++|+
T Consensus 70 ~~~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~~----~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~ 137 (260)
T 2yvt_A 70 NEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKI----F--------LRAAYEAETAYPNIRVLHEGFAGWRGEFEVI 137 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHH----H--------HHHHHHTTTTCTTEEECSSEEEEETTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhhh----h--------HHHHhhhccCCcceEEecCcceEEECCEEEE
Confidence 0223333333332 58999999999974100 0 0000000000000000001123778899999
Q ss_pred EEeCCCCC-CCCHHHHH----HHH----HHHhhccCCCCCeEEEEeccCCccCCC-CC-CchhHHHHHHHHHHHHhCCCe
Q 006591 462 VISTEHDW-WLNSEQYK----WIQ----KDLASVDRSKTPWLIFAGHRPMYSSLD-GF-LSVDKFFVKSVEPLLLKNKVD 530 (639)
Q Consensus 462 ~LDT~~~~-~~g~~Q~~----WL~----~~La~~~r~~~pwvIV~~H~P~y~~~~-~~-~~~~~~~r~~l~~Ll~~y~Vd 530 (639)
.++..... ....+|+. |+. +.|++. .....|++.|+|++.... .. ........+.+.+++++++++
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~ 214 (260)
T 2yvt_A 138 GFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPE 214 (260)
T ss_dssp EECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCS
T ss_pred ecCCCcCCCCcCHHHHhhcchhhHHHHHHHHHhc---CCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCC
Confidence 99743210 11112221 333 334432 123469999999875311 00 000000124566778888999
Q ss_pred EEEeCccc
Q 006591 531 LVLFGHVH 538 (639)
Q Consensus 531 lvlsGH~H 538 (639)
++++||+|
T Consensus 215 ~vl~GH~H 222 (260)
T 2yvt_A 215 VAIVGHVG 222 (260)
T ss_dssp EEEECSSC
T ss_pred EEEECCcc
Confidence 99999999
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.40 E-value=5.3e-13 Score=141.02 Aligned_cols=254 Identities=13% Similarity=0.087 Sum_probs=132.8
Q ss_pred CceEEEEEecCCCCC----CCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCC-ccccCCc-HHHHHHHHHhhhhhh
Q 006591 326 DEMKFLAYGDMGKAP----RDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGD-ISYATGF-LVEWDFFLHQITPVA 399 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~----~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GD-l~y~~g~-~~~wd~f~~~l~~l~ 399 (639)
..+||++++|+|.+. .-.... ........++++++.+++.++|+|+++|| +++.... ....+.+.+.++.+.
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~--r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVD--RREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEE--CHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcC--hhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 579999999999762 110000 00112467888888888889999999999 6643322 222345556666554
Q ss_pred cCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccc----cCCCCCCCCCCeEEEEeCCEEEEEEeCCCCC------
Q 006591 400 SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETY----FPMPTPSKDRPWYSIEQASVHFTVISTEHDW------ 469 (639)
Q Consensus 400 ~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~----f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~------ 469 (639)
..+|+++++||||... . .. ...+... +.+..+......+.++.+++.|+.++.....
T Consensus 95 ~~~pv~~i~GNHD~~~-~--~~----------~~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~ 161 (336)
T 2q8u_A 95 RTAPVVVLPGNHDWKG-L--KL----------FGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKN 161 (336)
T ss_dssp HHSCEEECCC-------C--HH----------HHHHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CC
T ss_pred hcCCEEEECCCCCccc-c--cc----------HHHHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHh
Confidence 3389999999999742 0 00 0011000 1000000000001122356888888643221
Q ss_pred -CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHH-HHHHHHHHHhCCCeEEEeCcccccceeeccc
Q 006591 470 -WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFF-VKSVEPLLLKNKVDLVLFGHVHNYERTCSVF 547 (639)
Q Consensus 470 -~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~-r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~ 547 (639)
....+|++|+.+.|...-+....+.|+++|.|++..... ... ..+ ...+...+.+.++|++++||.|..+...
T Consensus 162 ~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~-~~~-~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~--- 236 (336)
T 2q8u_A 162 EGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY-AGI-EQGREIIINRALIPSVVDYAALGHIHSFREIQ--- 236 (336)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEESCSSCEEEE---
T ss_pred hHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCC-CCc-cchhhcccCHHHccccCCEEEEccccCceEeC---
Confidence 112467889988886421023457999999998643210 000 000 0001112345689999999999987641
Q ss_pred CCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCC-EEEEEEEECCCCe
Q 006591 548 RNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQ-EIQLEFVNADTRK 626 (639)
Q Consensus 548 ~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~-~L~~e~~~~~dG~ 626 (639)
. .+..+..|+... .+++. .....||..++++++ .+.++++.... +
T Consensus 237 ~-----------------------~~~i~y~GS~~~---------~s~~e-~~~~~~~~lv~i~~~~~~~v~~i~~~~-r 282 (336)
T 2q8u_A 237 K-----------------------QPLTIYPGSLIR---------IDFGE-EADEKGAVFVELKRGEPPRYERIDASP-L 282 (336)
T ss_dssp E-----------------------TTEEEECCCSSC---------CSGGG-TTCCCEEEEEEEETTSCCEEEEEECCC-C
T ss_pred C-----------------------CccEEECCCCcC---------CCccc-cCCCCEEEEEEEeCCCccEEEEEECCC-E
Confidence 0 011222343211 01111 012468999999865 58899988644 6
Q ss_pred EEEEEEE
Q 006591 627 VEDSFRI 633 (639)
Q Consensus 627 v~D~f~I 633 (639)
.+-.+.+
T Consensus 283 ~~~~~~~ 289 (336)
T 2q8u_A 283 PLKTLYY 289 (336)
T ss_dssp CEEEEEE
T ss_pred EEEEeec
Confidence 5655554
No 13
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.36 E-value=5.1e-11 Score=115.66 Aligned_cols=181 Identities=13% Similarity=0.113 Sum_probs=111.9
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
.+|++++||+|...... ...+.+.+.+++.++|+|+++||++. ...++.++.+ ..|++.
T Consensus 10 mm~i~~iSD~H~~~~~~-----------~~~~~l~~~~~~~~~d~ii~~GDl~~--------~~~~~~l~~~--~~~~~~ 68 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCN-----------SLPAKFKKLLVPGKIQHILCTGNLCT--------KESYDYLKTL--AGDVHI 68 (192)
T ss_dssp -CEEEEECCCCBTTTCS-----------SCCHHHHTTCCTTSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEE
T ss_pred ceEEEEEecCCCCccch-----------hHHHHHHHHhccCCCCEEEEcCCCCC--------HHHHHHHHhc--CCCEEE
Confidence 47999999999753211 01123333344567999999999984 2233444443 358999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
++||||... .+|. ...++.
T Consensus 69 v~GNhD~~~------------------------~lp~------~~~~~~------------------------------- 87 (192)
T 1z2w_A 69 VRGDFDENL------------------------NYPE------QKVVTV------------------------------- 87 (192)
T ss_dssp CCCTTCCCT------------------------TSCS------EEEEEE-------------------------------
T ss_pred EcCCcCccc------------------------cCCc------ceEEEE-------------------------------
Confidence 999999731 1121 111111
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCcccc
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYD 566 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~ 566 (639)
..+.|++.|.+++.... . .+.+..++++.++|++++||+|......
T Consensus 88 ----~~~~i~l~Hg~~~~~~~---~-----~~~l~~~~~~~~~d~vi~GHtH~~~~~~---------------------- 133 (192)
T 1z2w_A 88 ----GQFKIGLIHGHQVIPWG---D-----MASLALLQRQFDVDILISGHTHKFEAFE---------------------- 133 (192)
T ss_dssp ----TTEEEEEECSCCCCBTT---C-----HHHHHHHHHHHSSSEEECCSSCCCEEEE----------------------
T ss_pred ----CCEEEEEECCCcCCCCC---C-----HHHHHHHHHhcCCCEEEECCcCcCccEe----------------------
Confidence 12568888865543221 1 2456667777899999999999854321
Q ss_pred CCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCeE-EEEEEEEe
Q 006591 567 HSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKV-EDSFRIIR 635 (639)
Q Consensus 567 ~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v-~D~f~I~k 635 (639)
.+++.++..|+.+...... ......+|..++++++.++++++....+++ +.++++.|
T Consensus 134 ---~~~~~~inpGS~~~~~~~~---------~~~~~~~y~il~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 191 (192)
T 1z2w_A 134 ---HENKFYINPGSATGAYNAL---------ETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 191 (192)
T ss_dssp ---ETTEEEEECCCTTCCCCSS---------CSCCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred ---ECCEEEEECCcccccCCCC---------CcCCCCcEEEEEEECCEEEEEEEEccCCEEEEEEEEEcc
Confidence 0235677778776532110 012346899999999999999998766664 66666665
No 14
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.33 E-value=4.4e-11 Score=114.43 Aligned_cols=167 Identities=16% Similarity=0.179 Sum_probs=111.2
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
.+|++++||+|.. ...++++++.+.+ ++|+|+++||+.+. .++.+.. |++.
T Consensus 6 ~m~i~~isD~H~~--------------~~~~~~~~~~~~~-~~d~i~~~GD~~~~------------~l~~l~~--~~~~ 56 (176)
T 3ck2_A 6 KQTIIVMSDSHGD--------------SLIVEEVRDRYVG-KVDAVFHNGDSELR------------PDSPLWE--GIRV 56 (176)
T ss_dssp CEEEEEECCCTTC--------------HHHHHHHHHHHTT-TSSEEEECSCCCSC------------TTCGGGT--TEEE
T ss_pred CcEEEEEecCCCC--------------HHHHHHHHHHhhc-CCCEEEECCCCchH------------HHHhhhC--CeEE
Confidence 4899999999932 3456777777755 89999999998431 2333332 8999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
+.||||... ..|. ...++.
T Consensus 57 v~GNhD~~~------------------------~~p~------~~~~~~------------------------------- 75 (176)
T 3ck2_A 57 VKGNMDFYA------------------------GYPE------RLVTEL------------------------------- 75 (176)
T ss_dssp CCCTTCCST------------------------TCCS------EEEEEE-------------------------------
T ss_pred ecCcccchh------------------------cCCc------EEEEEE-------------------------------
Confidence 999999631 0121 000100
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCcccc
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYD 566 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~ 566 (639)
..+.|++.|.|++.... . .+.+.+++++++++++++||+|......
T Consensus 76 ----~~~~i~~~Hg~~~~~~~---~-----~~~l~~~~~~~~~d~vi~GHtH~~~~~~---------------------- 121 (176)
T 3ck2_A 76 ----GSTKIIQTHGHLFDINF---N-----FQKLDYWAQEEEAAICLYGHLHVPSAWL---------------------- 121 (176)
T ss_dssp ----TTEEEEEECSGGGTTTT---C-----SHHHHHHHHHTTCSEEECCSSCCEEEEE----------------------
T ss_pred ----CCeEEEEECCCccCCCC---C-----HHHHHHHHHhcCCCEEEECCcCCCCcEE----------------------
Confidence 12468889998864321 1 2456677788999999999999865321
Q ss_pred CCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCeEEEEEEE
Q 006591 567 HSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKVEDSFRI 633 (639)
Q Consensus 567 ~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v~D~f~I 633 (639)
.+++.++..|+.|.+... ....+|..++++++.+++++++. +|+++.+++.
T Consensus 122 ---~~~~~~inpGs~~~~~~~------------~~~~~y~il~~~~~~~~v~~~~~-~~~~~~~~~~ 172 (176)
T 3ck2_A 122 ---EGKILFLNPGSISQPRGT------------IRECLYARVEIDDSYFKVDFLTR-DHEVYPGLSK 172 (176)
T ss_dssp ---ETTEEEEEECCSSSCCTT------------CCSCCEEEEEECSSEEEEEEECT-TSCBCTTCCE
T ss_pred ---ECCEEEEECCCCCcCCCC------------CCCCeEEEEEEcCCEEEEEEEEE-CCEEcchhhc
Confidence 023567777887754211 11358999999999999999875 7887775543
No 15
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.32 E-value=2.2e-11 Score=120.58 Aligned_cols=190 Identities=12% Similarity=0.117 Sum_probs=111.4
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
.+|++++||+|........ ...+.++ ++..++|+|+++||+++ .+.++.++.+ ..|++.
T Consensus 25 ~m~i~~iSD~H~~~~~~~l--------~~~l~~~---~~~~~~D~vi~~GDl~~--------~~~l~~l~~~--~~~v~~ 83 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKEL--------PSNFREL---LATDKINYVLCTGNVCS--------QEYVEMLKNI--TKNVYI 83 (215)
T ss_dssp CEEEEEECCCCTTTTCSSC--------CGGGHHH---HHCTTCCEEEECSCCCC--------HHHHHHHHHH--CSCEEE
T ss_pred CcEEEEEecCCCCCChHHH--------HHHHHHH---HhcCCCCEEEECCCCCC--------HHHHHHHHHc--CCCEEE
Confidence 5899999999975321100 1122222 34578999999999994 2334444443 368999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
++||||...... ...+.. .+|. ...+ +
T Consensus 84 V~GNHD~~~~~~-------------~~~~~~--~lp~------~~~~-------------------------------~- 110 (215)
T 2a22_A 84 VSGDLDSAIFNP-------------DPESNG--VFPE------YVVV-------------------------------Q- 110 (215)
T ss_dssp CCCTTCCSCCBC-------------CGGGTB--CCCS------EEEE-------------------------------E-
T ss_pred ecCCCcCccccc-------------ChhhHh--hCCc------eEEE-------------------------------e-
Confidence 999999742100 000000 0000 0000 0
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCcccc
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYD 566 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~ 566 (639)
...+.|++.|.+++.... . .+.+..++++.++|++++||+|......
T Consensus 111 ---~~~~~i~l~Hg~~~~~~~---~-----~~~l~~~~~~~~~d~vl~GHtH~~~~~~---------------------- 157 (215)
T 2a22_A 111 ---IGEFKIGLMHGNQVLPWD---D-----PGSLEQWQRRLDCDILVTGHTHKLRVFE---------------------- 157 (215)
T ss_dssp ---ETTEEEEEECSTTSSSTT---C-----HHHHHHHHHHHTCSEEEECSSCCCEEEE----------------------
T ss_pred ---cCCeEEEEEcCCccCCCC---C-----HHHHHHHHhhcCCCEEEECCcCCCccEe----------------------
Confidence 012478888965543211 1 2456667777899999999999854321
Q ss_pred CCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCeE-EEEEEEEe
Q 006591 567 HSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKV-EDSFRIIR 635 (639)
Q Consensus 567 ~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v-~D~f~I~k 635 (639)
.+++.++..|+.+...... ......+|..++++++.++++++...+|++ +.+..+.|
T Consensus 158 ---~~~~~~inpGS~~~~~~~~---------~~~~~~~y~il~i~~~~i~~~~~~~~~~~~~v~~~~~~~ 215 (215)
T 2a22_A 158 ---KNGKLFLNPGTATGAFSAL---------TPDAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFSK 215 (215)
T ss_dssp ---ETTEEEEECCCSSCCCCTT---------STTCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred ---eCCEEEEECCcccccCCCC---------CCCCCCcEEEEEEeCCcEEEEEEEecCCeEEEEEEEeeC
Confidence 0235667778776532110 011246899999999999999988766764 55555443
No 16
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.31 E-value=5.9e-12 Score=127.02 Aligned_cols=213 Identities=8% Similarity=0.004 Sum_probs=115.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh---cC--CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCC
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN---NG--NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRV 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~---~~--~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~v 402 (639)
++++++||+|.. ...++++++.+. .. ++|+|+++||+++.+.... +..+.+..+....
T Consensus 2 m~i~~isD~H~~--------------~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~---~~~~~l~~l~~~~ 64 (252)
T 1nnw_A 2 VYVAVLANIAGN--------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPK---EVIEVIKDLTKKE 64 (252)
T ss_dssp CEEEEEECCTTC--------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHH---HHHHHHHHHHHHS
T ss_pred cEEEEEeecCCC--------------HHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHH---HHHHHHHhhHhhc
Confidence 589999999942 234566666665 55 7999999999996543332 2334444433235
Q ss_pred ceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHH
Q 006591 403 SYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKD 482 (639)
Q Consensus 403 P~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~ 482 (639)
|+++++||||........ . +. .+..... ++........+. ........+|++||++.
T Consensus 65 ~~~~v~GNhD~~~~~~~~-----~----~~-~~~~~~~------------~~~~~~~~~~~~-~~~~~l~~~~~~~L~~l 121 (252)
T 1nnw_A 65 NVKIIRGKYDQIIAMSDP-----H----AT-DPGYIDK------------LELPGHVKKALK-FTWEKLGHEGREYLRDL 121 (252)
T ss_dssp CEEEECCHHHHHHHHSCT-----T----CS-SSGGGGG------------SSCCHHHHHHHH-HHHHHHHHHHHHHHHTS
T ss_pred CeeEEecchHHHhhcccc-----c----cC-Ccccccc------------hhhhHHHHHHHH-HHHHHCCHHHHHHHHhC
Confidence 899999999973210000 0 00 0000000 000000000000 00001346788898764
Q ss_pred HhhccCCCCCeEEEEeccCCccCC-C-CCCchhHHHHHHHHHHHHhC-CCeEEEeCcccccceeecccCCeecCCCccCC
Q 006591 483 LASVDRSKTPWLIFAGHRPMYSSL-D-GFLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTCSVFRNKCMGIPTKDD 559 (639)
Q Consensus 483 La~~~r~~~pwvIV~~H~P~y~~~-~-~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~ 559 (639)
.......-....|++.|++++... . ...... .+.+..++.++ +++++++||+|......
T Consensus 122 p~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------------- 183 (252)
T 1nnw_A 122 PIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQP---TSYYEAIMRPVKDYEMLIVASPMYPVDAM--------------- 183 (252)
T ss_dssp CSCEEEEETTEEEEEESSCSSCTTTCCCCSSCC---HHHHHHHHGGGTTSSEEEESTTCSEEEEE---------------
T ss_pred CceEEEeeCCcEEEEEcCCCCCCcccccCCCCC---HHHHHHHHhcCCCCCEEEECCccccceEe---------------
Confidence 332211112246888898874322 1 111111 35677788888 99999999999855321
Q ss_pred CCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEE
Q 006591 560 NGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFV 620 (639)
Q Consensus 560 ~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~ 620 (639)
.+++++|..|+.|.+... ....+|..+++++.+++++.+
T Consensus 184 ----------~~~~~~in~Gs~~~~~~~------------~~~~~y~il~~~~~~v~~~~v 222 (252)
T 1nnw_A 184 ----------TRYGRVVCPGSVGFPPGK------------EHKATFALVDVDTLKPKFIEV 222 (252)
T ss_dssp ----------ETTEEEEEECCSSSCSSS------------SCCEEEEEEETTTCCEEEEEE
T ss_pred ----------cCCeEEEECCCccCCCCC------------CCcceEEEEECCCCeEEEEEe
Confidence 023567888888764321 013478888887766666554
No 17
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.23 E-value=7e-11 Score=127.29 Aligned_cols=189 Identities=12% Similarity=0.089 Sum_probs=102.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc-HHHHHHHHHhhhhhhc-CCc
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF-LVEWDFFLHQITPVAS-RVS 403 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~-~~~wd~f~~~l~~l~~-~vP 403 (639)
..+||++++|+|.+........ ........++++++.+.+.++|+||++||+++.... ...+..+.+.++.+.. .+|
T Consensus 19 ~~mrilhiSD~Hlg~~~~~~~~-r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 19 SHMMFVHIADNHLGYRQYNLDD-REKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCEEEEECCCCBTCCGGGCHH-HHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEEEccCCCCccccCcch-hhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 5799999999998642110000 000113467788888888899999999999865422 2345566677776653 589
Q ss_pred eEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHH---H
Q 006591 404 YMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWI---Q 480 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL---~ 480 (639)
+++++||||........ .....+...+..-. ...++..+-+++.|+.++..... ......+|| .
T Consensus 98 v~~v~GNHD~~~~~~~~---------~~~~~l~~~v~~l~---~~~v~~~~~~~v~i~gl~~~~~~-~~~~~~~~l~~l~ 164 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGEE---------SPLALLKDYVKILD---GKDVINVNGEEIFICGTYYHKKS-KREEMLDKLKNFE 164 (386)
T ss_dssp EEECCCGGGSCSSTTSC---------CGGGGGTTTCEECS---EEEEEEETTEEEEEEEECCCCST-THHHHHHHHHHHH
T ss_pred EEEEcCCCCCCcccccc---------CHHHHHHHHeEEcC---CCcEEEeCCCCEEEEeCCCCCHH-HHHHHHHHHHHhh
Confidence 99999999974211100 00001111010000 01111111245888888864332 112333333 3
Q ss_pred HHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 481 KDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 481 ~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
..+. ...+.|+++|+|+........... +.. +. ++|++++||.|..++
T Consensus 165 ~~~~-----~~~~~Ill~H~~~~~~~~~~~~~~------~~~-l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 165 SEAK-----NYKKKILMLHQGINPYIPLDYELE------HFD-LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp HHHH-----TCSSEEEEECCCCTTTSSSSCSSC------GGG-SC--CCSEEEECSCCSCEE
T ss_pred hhcc-----cCCCEEEEECcCccccCCCCcccC------HHH-hh--hCCeEEccCCCCCcc
Confidence 2222 234589999999853211000000 011 11 399999999998743
No 18
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.18 E-value=1.4e-10 Score=117.01 Aligned_cols=216 Identities=15% Similarity=0.150 Sum_probs=117.2
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+.+|++++||+|.. ...++++++.+. ++|.++++||++....... +..+.+..+. +++
T Consensus 2 ~~mri~~isDiHg~--------------~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~---~~~~~l~~~~---~~~ 59 (246)
T 3rqz_A 2 NAMRILIISDVHAN--------------LVALEAVLSDAG--RVDDIWSLGDIVGYGPRPR---ECVELVRVLA---PNI 59 (246)
T ss_dssp CCCCEEEECCCTTC--------------HHHHHHHHHHHC--SCSEEEECSCCSSSSSCHH---HHHHHHHHHC---SSE
T ss_pred CCcEEEEEeecCCC--------------HHHHHHHHHhcc--CCCEEEECCCcCCCCCCHH---HHHHHHHhcC---CCE
Confidence 45899999999932 345677777765 8999999999996543322 3334444331 368
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLAS 485 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~ 485 (639)
.+.||||...... +... .+..... ....| .......++++||++....
T Consensus 60 ~v~GNhD~~~~~~---~~~~--------~~~~~~~-----~~~~~----------------~~~~l~~~~~~~L~~lp~~ 107 (246)
T 3rqz_A 60 SVIGNHDWACIGR---LSLD--------EFNPVAR-----FASYW----------------TTMQLQAEHLQYLESLPNR 107 (246)
T ss_dssp ECCCHHHHHHTCC---CCCC----------CGGGG-----CHHHH----------------HHHHCCHHHHHHHHHCCSE
T ss_pred EEeCchHHHHhcc---CCcc--------ccCHHHH-----HHHHH----------------HHHHcCHHHHHHHHhCCcE
Confidence 9999999742110 0000 0000000 00000 0012457889999864433
Q ss_pred ccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc-eeecccCCeecCCCccCCCCCcc
Q 006591 486 VDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE-RTCSVFRNKCMGIPTKDDNGIDT 564 (639)
Q Consensus 486 ~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye-Rt~p~~~~~~~~~~~~d~~G~~~ 564 (639)
... . .|++.|.++......+... ...+..++++++++++|+||+|... +...- +..+.-.+... .+ ..
T Consensus 108 ~~~-~---~i~~~Hg~p~~~~~~~~~~----~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~-~~~~~~~~~~~-~~-~~ 176 (246)
T 3rqz_A 108 MID-G---DWTVVHGSPRHPIWEYIYN----ARIAALNFPAFDTPLCFVGHTHVPLYIREDE-ALSNVAPHHPN-DG-EV 176 (246)
T ss_dssp EEE-T---TEEEESSCSSSTTTCCCCS----HHHHHHHGGGCCSSEEECCSSSSEEEEEHHH-HHTTCCCBCCC-TT-CE
T ss_pred EEE-C---CEEEEECCcCCccccccCC----hHHHHHHHhccCCCEEEECCcCcccEEEecc-ccccccccccc-cc-ce
Confidence 221 1 4777888876543211111 2456778899999999999999743 22100 00000000000 00 00
Q ss_pred ccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEE
Q 006591 565 YDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFV 620 (639)
Q Consensus 565 y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~ 620 (639)
+.- ..+...|..|+.|.+.+.. ..-+|+.++.+..+++++.+
T Consensus 177 ~~l--~~g~~ivNpGSVG~Prdg~------------p~A~Y~i~d~~~~~v~~~rv 218 (246)
T 3rqz_A 177 LDV--SSGRYIINPGAVGQPRDGD------------PRASYAIFEPDAQRVTFHRV 218 (246)
T ss_dssp EEC--SSSCEEEEECCSSCCCSSC------------CSEEEEEEEGGGTEEEEEEE
T ss_pred eec--CCCeEEEECCccCCCCCcC------------CcceEEEEECCCCEEEEEEe
Confidence 100 1235678889999764321 13378888887776666554
No 19
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.17 E-value=1.1e-10 Score=119.57 Aligned_cols=218 Identities=12% Similarity=0.100 Sum_probs=123.5
Q ss_pred CCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 325 SDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
.++.|++++||+|.. ...++++++.+.+.++|.|+++||++..+... .+..+.++.+ .|+
T Consensus 9 ~~~~~i~~iSDiHg~--------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~~---~~~ 68 (270)
T 3qfm_A 9 MDMTKIALLSDIHGN--------------TTALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQL---PIT 68 (270)
T ss_dssp --CEEEEEECCCTTC--------------HHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHTS---CEE
T ss_pred ccccEEEEEecCCCC--------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHcc---CCE
Confidence 367999999999942 45677788888777899999999999654322 3344444433 378
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La 484 (639)
+++.||||...... .. +.+ . |..+. ..+.. . .+ .........+|++||++.-.
T Consensus 69 ~~v~GNhD~~~~~~------~~--~~~--~----~~~~~----~~~~~----~----~~-~~~~~~L~~~~~~~L~~LP~ 121 (270)
T 3qfm_A 69 ARVLGNWEDSLWHG------VR--KEL--D----STRPS----QRYLL----R----QC-QYVLEEISLEEIEVLHNQPL 121 (270)
T ss_dssp EECCCHHHHHHHHH------HT--TCS--C----TTSHH----HHHHH----H----HH-HHHHTTSCHHHHHHHHSCCS
T ss_pred EEEcCChHHHHHHh------hc--ccc--C----CCcHH----HHHHH----H----HH-HHHHHHcCHHHHHHHHhCCC
Confidence 99999999731100 00 000 0 00000 00000 0 00 00011356789999886443
Q ss_pred hccCCCCCeEEEEeccCCccCCC-CCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCc
Q 006591 485 SVDRSKTPWLIFAGHRPMYSSLD-GFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGID 563 (639)
Q Consensus 485 ~~~r~~~pwvIV~~H~P~y~~~~-~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~ 563 (639)
.....-....|++.|..+..... .... ..-.+.+..++++.++|++|+||+|...... +
T Consensus 122 ~~~~~~~g~~i~lvHg~p~~~~~~~~~~--~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~-~----------------- 181 (270)
T 3qfm_A 122 QIHRQFGDLTVGISHHLPDKNWGRELIH--TGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY-G----------------- 181 (270)
T ss_dssp EEEEEETTEEEEEESSBTTBSSSSTTST--TCCHHHHHHTTTTTTCSEEECCSSCSEEEEE-C-----------------
T ss_pred ceEEEECCcEEEEEECCCCCCCCceecC--CCcHHHHHHHhcccCCCEEEECCcCchHhee-c-----------------
Confidence 32111123467788876643321 1110 0113567777888899999999999643211 0
Q ss_pred cccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCE-EEEEEEE
Q 006591 564 TYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQE-IQLEFVN 621 (639)
Q Consensus 564 ~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~-L~~e~~~ 621 (639)
.++..+|..|+.|.+....+.. .......|+.++++++. +.+++++
T Consensus 182 ------~~~~~~iNpGSvg~pr~~~~~~------~~~~~asyaild~~~~~~~~v~~~r 228 (270)
T 3qfm_A 182 ------TGGQLIVNPGSIGQPFFLDAQL------RKDLRAQYMILEFDDKGLVDMDFRR 228 (270)
T ss_dssp ------TTSCEEEEECCSSSCCCSSTTG------GGCCCEEEEEEEEETTEEEEEEEEE
T ss_pred ------cCCEEEEECCCccCCCCCCccc------cCCCCCEEEEEEecCCCceEEEEEE
Confidence 1245788899998764321100 00123579999998776 6888865
No 20
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.15 E-value=2e-10 Score=118.74 Aligned_cols=187 Identities=14% Similarity=0.112 Sum_probs=99.5
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+.+||+++||+|..... + +-.++|+||++||+++. +...+.+.+.+.++.+. ..+++
T Consensus 58 ~~mri~~iSD~H~~~~~-----------------l----~i~~~D~vi~aGDl~~~-g~~~e~~~~~~~L~~l~-~~~v~ 114 (296)
T 3rl5_A 58 GHTRFVCISDTRSRTDG-----------------I----QMPYGDILLHTGDFTEL-GLPSEVKKFNDWLGNLP-YEYKI 114 (296)
T ss_dssp TEEEEEEEBCCTTCCTT-----------------C----CCCSCSEEEECSCCSSS-CCHHHHHHHHHHHHTSC-CSEEE
T ss_pred CCeEEEEEeeCCCCcch-----------------h----ccCCCCEEEECCcccCC-CCHHHHHHHHHHHHhCC-CCeEE
Confidence 56999999999975321 0 11579999999999964 55566677777776652 34689
Q ss_pred EecCCCCcCCCCCCCccCC---CCC-------CCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC---CCCCC
Q 006591 406 TAIGNHERDYVNSGSVYST---PDS-------GGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH---DWWLN 472 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~---~ds-------gge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~---~~~~g 472 (639)
+++||||+..... .+.. .+. ... ...+...-.++.+..--.--+..+++++|+...-.. .|...
T Consensus 115 ~V~GNHD~~~d~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~ 191 (296)
T 3rl5_A 115 VIAGNHELTFDKE--FMADLVKQDYYRFPSVSKLK-PEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFN 191 (296)
T ss_dssp ECCCTTCGGGCHH--HHHHHTTSCGGGSHHHHTCC-HHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTB
T ss_pred EEcCCcccccchh--hhhhhhcccccccccccccc-cchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCC
Confidence 9999999843210 0000 000 000 000000000111100000114567889988844221 11111
Q ss_pred HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCC-chhHHHHHHHHHHH-HhCCCeEEEeCcccccc
Q 006591 473 SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFL-SVDKFFVKSVEPLL-LKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 473 ~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~-~~~~~~r~~l~~Ll-~~y~VdlvlsGH~H~Ye 541 (639)
.++.+++.+.+.... ....|++.|.|++....... .......+.|..++ ++++++++++||+|...
T Consensus 192 ~~~~~~~~~~~~~ip---~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~ 259 (296)
T 3rl5_A 192 LPRGQSLLDKWNLIP---EGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGY 259 (296)
T ss_dssp CCTTHHHHHHHTTSC---TTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGC
T ss_pred cchHHHHHHHHhhCC---CCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCC
Confidence 222234444444332 23368999999987643110 00000123455555 68999999999999743
No 21
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.08 E-value=1.3e-09 Score=105.70 Aligned_cols=63 Identities=22% Similarity=0.418 Sum_probs=47.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+|++++||+|.. ...++++++.+++.++|+|+++||+++. +.++.++.+ ..|++++
T Consensus 26 m~i~~iSD~Hg~--------------~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~V 81 (190)
T 1s3l_A 26 MKIGIMSDTHDH--------------LPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIAT 81 (190)
T ss_dssp CEEEEECCCTTC--------------HHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEEE
T ss_pred eEEEEEeeCCCC--------------HHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEE
Confidence 899999999931 3456677777766789999999999842 234444433 5799999
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
+||||..
T Consensus 82 ~GNhD~~ 88 (190)
T 1s3l_A 82 YGNNDGE 88 (190)
T ss_dssp CCTTCCC
T ss_pred eCCCcch
Confidence 9999974
No 22
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.07 E-value=8e-10 Score=118.73 Aligned_cols=199 Identities=14% Similarity=0.195 Sum_probs=108.1
Q ss_pred eEEEEEecCCCCCCCCC-Ccc-ccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCC--cHHHHHHHHHhhhhhhcCCc
Q 006591 328 MKFLAYGDMGKAPRDAS-TEH-YIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG--FLVEWDFFLHQITPVASRVS 403 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~-~~~-~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g--~~~~wd~f~~~l~~l~~~vP 403 (639)
+||++++|+|.+..... ... .........++++++.+.+.+||+||++||++++.. ....++.+.+.++.+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 58999999998754100 000 001112456777877777789999999999994332 23345556666666543389
Q ss_pred eEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCC---CCCCeEEEE--eC-CEEEEEEeCCCCC----CCCH
Q 006591 404 YMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPS---KDRPWYSIE--QA-SVHFTVISTEHDW----WLNS 473 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~---~~~~~Ysfd--~G-~v~fi~LDT~~~~----~~g~ 473 (639)
+++++||||.... ..+ ..+.. .++.+. ....-+.+. .| .+.|+.+.-.... ..+.
T Consensus 81 v~~i~GNHD~~~~---~~~----------~~~~~--~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~ 145 (379)
T 3tho_B 81 VVVLPGNQDWKGL---KLF----------GNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEG 145 (379)
T ss_dssp EEECCCTTSCTTH---HHH----------HHHHH--TTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHH
T ss_pred EEEEcCCCccccC---ccc----------ccccc--ccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhcc
Confidence 9999999995210 000 00000 001000 000112222 23 4777776532211 1245
Q ss_pred HHHHHHHHHHhhc---cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 474 EQYKWIQKDLASV---DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 474 ~Q~~WL~~~La~~---~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
++.+|+.+.|+.. ......+.|+++|.++..... .......+...+...+...++|+++.||.|..+.
T Consensus 146 ~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~-~~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~ 216 (379)
T 3tho_B 146 DFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG-YAGIEQGREIIINRALIPSVVDYAALGHIHSFRE 216 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC--------CSCCBCGGGSCTTSSEEEEESCSSCEE
T ss_pred chHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCcc-CCCCccccccccCHHHcCcCCCEEEcccccCCeE
Confidence 7789999888721 112345689999999854321 0000000001122223346899999999999865
No 23
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.99 E-value=1.4e-08 Score=97.38 Aligned_cols=64 Identities=17% Similarity=0.103 Sum_probs=42.2
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
-+|++++||+|...... .++++++.+. .++|+|+++||+++. +..+.++.+ ..|++.
T Consensus 22 mmri~~iSD~Hg~~~~~------------~l~~~l~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~ 78 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMA------------SLPDEILNSL-KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYG 78 (178)
T ss_dssp CEEEEEECCCCBTTTTC------------CCCHHHHHGG-GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEE
T ss_pred ceEEEEEecccCCCCHH------------HHHHHHHHHh-cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEE
Confidence 37999999999421110 1223333333 579999999999852 233444443 368999
Q ss_pred ecCCCCc
Q 006591 407 AIGNHER 413 (639)
Q Consensus 407 v~GNHD~ 413 (639)
+.||||.
T Consensus 79 V~GNhD~ 85 (178)
T 2kkn_A 79 VHGNMDY 85 (178)
T ss_dssp CCCSSSC
T ss_pred EECCCCc
Confidence 9999996
No 24
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.95 E-value=9.8e-10 Score=106.70 Aligned_cols=149 Identities=16% Similarity=0.211 Sum_probs=88.4
Q ss_pred eEEEEEecCCCCCCCCC-CccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 328 MKFLAYGDMGKAPRDAS-TEHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~-~~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
++++++||+|.+..... ...+. ......+++.+.+++ .++|+|+++||+++.. .+++.+.+.++.+ ..|+
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l--~~~~ 74 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEV--RFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKAL--PGRK 74 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTT--CCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHS--SSEE
T ss_pred cEEEEEeccccCCCccccccCCC--CHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHC--CCCE
Confidence 68999999997542100 00000 012345566666554 5899999999999653 2223344445444 3589
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La 484 (639)
+.++||||.... .+... |-. +. +..||+
T Consensus 75 ~~v~GNhD~~~~-----------------~~~~~-----------~~~----------l~----------~~~~l~---- 102 (195)
T 1xm7_A 75 ILVMGNHDKDKE-----------------SLKEY-----------FDE----------IY----------DFYKII---- 102 (195)
T ss_dssp EEECCTTCCCHH-----------------HHTTT-----------CSE----------EE----------SSEEEE----
T ss_pred EEEeCCCCCchh-----------------hhhhh-----------hhc----------hh----------HHHHHH----
Confidence 999999997310 11111 100 10 111221
Q ss_pred hccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 485 SVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 485 ~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
+. ..+.|+++|+|++....... ....+.+..++.+++++++++||+|....
T Consensus 103 ~~----~~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 103 EH----KGKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp EE----TTEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred hc----CCcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 11 13479999999876543111 12357888899999999999999998654
No 25
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=98.91 E-value=1.5e-08 Score=109.85 Aligned_cols=245 Identities=11% Similarity=0.085 Sum_probs=128.9
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc-HHHHHHHHHhhhhh------
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF-LVEWDFFLHQITPV------ 398 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~-~~~wd~f~~~l~~l------ 398 (639)
+.+||++++|+|.+...... .........++++++.+.+.+||+||++||+++.... ......+.+.++.+
T Consensus 31 ~~mrilhiSDlHLg~~~~~~--~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~ 108 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDA--VRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRP 108 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCT--TTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSC
T ss_pred CCEEEEEEeccCCCCccccc--chhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCc
Confidence 57999999999987543211 1111234578888888888999999999999966432 23345555555543
Q ss_pred ----------------------------hcCCceEEecCCCCcCCCCCCCccCCCCCCCccc--cccccccCCCCCCCCC
Q 006591 399 ----------------------------ASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECG--IPYETYFPMPTPSKDR 448 (639)
Q Consensus 399 ----------------------------~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~--~~y~~~f~~P~~~~~~ 448 (639)
...+|++++.||||... +.+.. +..... .....+|..... .+.
T Consensus 109 ~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~-g~~~l-----~~~~lL~~~glv~~fg~~~~-~e~ 181 (431)
T 3t1i_A 109 VQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPT-GADAL-----CALDILSCAGFVNHFGRSMS-VEK 181 (431)
T ss_dssp CCCEECSCC------------------CCBCSCEEECCCSSSCCB-TTTTB-----CHHHHHHHHTSEEECCCCCC-SSC
T ss_pred ccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcc-ccccc-----CHHHHhccCCcEEEECCcCc-ccc
Confidence 13799999999999731 10000 000000 001122321110 011
Q ss_pred C---eEEEEeCC--EEEEEEeCCCCCCCCHHHHHHHHHHHhh-----ccC---CCCCeEEEEeccCCccCCCCCCchhHH
Q 006591 449 P---WYSIEQAS--VHFTVISTEHDWWLNSEQYKWIQKDLAS-----VDR---SKTPWLIFAGHRPMYSSLDGFLSVDKF 515 (639)
Q Consensus 449 ~---~Ysfd~G~--v~fi~LDT~~~~~~g~~Q~~WL~~~La~-----~~r---~~~pwvIV~~H~P~y~~~~~~~~~~~~ 515 (639)
. -..+.-|+ +.+..+.-. ..+ .+.+.+.. ... ....+.|++.|......+. .....
T Consensus 182 i~~~Pv~l~~g~~~valyGl~~~-----~~~---~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~-~~~ip-- 250 (431)
T 3t1i_A 182 IDISPVLLQKGSTKIALYGLGSI-----PDE---RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGS-TNFIP-- 250 (431)
T ss_dssp EEECCEEEEETTEEEEEEEECCC-----CHH---HHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSS-SSSCC--
T ss_pred eeeEEEEEecCCEeEEEEeCCCC-----CHH---HHhhhhccccceeecccccCCCceEEEEECCCccCCCc-cccCC--
Confidence 0 01233454 455555321 122 23333321 111 1223689999997643221 01111
Q ss_pred HHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCc
Q 006591 516 FVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATW 595 (639)
Q Consensus 516 ~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~w 595 (639)
.-+...++|+++.||.|..+....... ..++..+-.|+... ..+.
T Consensus 251 ------~~l~~~~~Dyv~lGH~H~~~~~~~~~~---------------------~~~~~i~yPGS~~~--~s~~------ 295 (431)
T 3t1i_A 251 ------EQFLDDFIDLVIWGHEHECKIAPTKNE---------------------QQLFYISQPGSSVV--TSLS------ 295 (431)
T ss_dssp ------GGGSCTTCCEEEECSCCSCEEEEEECT---------------------TTCCEEEECCCSSC--CSCC------
T ss_pred ------HhHhhCCCCEEEecccccccccccccC---------------------CCCEEEEeCCCCcc--cCcC------
Confidence 113345799999999999775321000 01233333444321 1111
Q ss_pred cceecccccEEEEEEeCCEEEEEEEECCCCe
Q 006591 596 SLSRVAKFGYLRGHATKQEIQLEFVNADTRK 626 (639)
Q Consensus 596 s~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~ 626 (639)
.......||..++++++.+.++++....-+
T Consensus 296 -e~E~~~k~~~lvei~~~~~~ve~i~l~~~R 325 (431)
T 3t1i_A 296 -PGEAVKKHVGLLRIKGRKMNMHKIPLHTVR 325 (431)
T ss_dssp -HHHHSCCEEEEEEEETTEEEEEEEECSSSC
T ss_pred -cccCCCCEEEEEEEECCEEEEEEEECCCcc
Confidence 111234599999999999999999865344
No 26
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=98.89 E-value=4.9e-08 Score=105.48 Aligned_cols=257 Identities=13% Similarity=0.086 Sum_probs=130.4
Q ss_pred CCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH-HHHHHHHHhhhh------
Q 006591 325 SDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-VEWDFFLHQITP------ 397 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~-~~wd~f~~~l~~------ 397 (639)
.+.+||++++|+|.+...... .........++++++.+.+.++|+|+++||+++..... .....+.+.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~--~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~ 88 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDP--VRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDK 88 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCT--TTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSC
T ss_pred CCCeEEEEEEcCCCCCccccc--ccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCC
Confidence 367999999999987542210 11112356788888888889999999999999664332 223334444333
Q ss_pred ------h----------------------hcCCceEEecCCCCcCCCCCCCccCCCCCCCccc--cccccccCCCCCCCC
Q 006591 398 ------V----------------------ASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECG--IPYETYFPMPTPSKD 447 (639)
Q Consensus 398 ------l----------------------~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~--~~y~~~f~~P~~~~~ 447 (639)
+ ...+|++++.||||.... .+ + .++.+.. ...-..|..... .+
T Consensus 89 ~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~-~~--~---~s~~~lL~~~g~v~l~g~~~~-~~ 161 (417)
T 4fbw_A 89 PCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSG-DG--R---YSALDILQVTGLVNYFGRVPE-ND 161 (417)
T ss_dssp CCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC--------C---CCHHHHHHHTTSCEECCCCC----
T ss_pred cccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccc-cc--c---ccHHHHhccCCeEEEeCCccc-CC
Confidence 1 137999999999997311 00 0 0000000 000011211100 00
Q ss_pred CC---eEEEEeCC--EEEEEEeCCCCCCCCHHHHHHHHHHHhh-ccC---CCCCeEEEEeccCCccCCCCCCchhHHHHH
Q 006591 448 RP---WYSIEQAS--VHFTVISTEHDWWLNSEQYKWIQKDLAS-VDR---SKTPWLIFAGHRPMYSSLDGFLSVDKFFVK 518 (639)
Q Consensus 448 ~~---~Ysfd~G~--v~fi~LDT~~~~~~g~~Q~~WL~~~La~-~~r---~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~ 518 (639)
+. -..+.-|+ +.+..+.-. ..+.-..++.+.... ... ....+.|++.|......... ....
T Consensus 162 ~i~~~pv~l~~g~~~valyG~~~~----~d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~-~yip----- 231 (417)
T 4fbw_A 162 NIVVSPILLQKGFTKLALYGISNV----RDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPT-SYLP----- 231 (417)
T ss_dssp CEEECCEEEEETTEEEEEEEECCC----CHHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSS-SSCC-----
T ss_pred ceeEEeEEEEecCceEEEEeccCC----chhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCc-ccCc-----
Confidence 10 01234444 444444421 111111233322221 111 23456899999987543210 0000
Q ss_pred HHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccce
Q 006591 519 SVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLS 598 (639)
Q Consensus 519 ~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~ 598 (639)
.-+...++|+++.||.|..+...-. + . .+++..+-.|+.... .+. ..
T Consensus 232 ---~~l~~~~~DyvalGH~H~~~~~~~~-~---------~-----------~~g~~i~~PGS~~~~--s~~-------e~ 278 (417)
T 4fbw_A 232 ---ESFIQDFYDFVLWGHEHECLIDGSY-N---------P-----------TQKFTVVQPGSTIAT--SLS-------PG 278 (417)
T ss_dssp ---GGGSCTTCSEEEEESCCSCEEEEEE-E---------T-----------TTTEEEEECCCSSCS--SCC-------HH
T ss_pred ---hhHhhcCCCEEEecCccccceeccc-c---------C-----------CCCEEEEECCCCCcC--CCc-------cc
Confidence 1144568999999999987653100 0 0 012333334443221 111 00
Q ss_pred ecccccEEEEEEeCCEEEEEEEECCCCe--EEEEEEE
Q 006591 599 RVAKFGYLRGHATKQEIQLEFVNADTRK--VEDSFRI 633 (639)
Q Consensus 599 ~~~~~Gy~~v~v~~~~L~~e~~~~~dG~--v~D~f~I 633 (639)
.....||..++++++.+.++++....-+ +..++.+
T Consensus 279 E~~~kg~~lvei~~~~~~~e~i~l~~~Rpf~~~~v~L 315 (417)
T 4fbw_A 279 ETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIIL 315 (417)
T ss_dssp HHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEG
T ss_pred cCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEe
Confidence 1135699999999999999999865433 3444443
No 27
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=98.86 E-value=1.1e-07 Score=103.61 Aligned_cols=88 Identities=14% Similarity=0.130 Sum_probs=60.2
Q ss_pred CCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH-HHHHHHHHhhhh------
Q 006591 325 SDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-VEWDFFLHQITP------ 397 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~-~~wd~f~~~l~~------ 397 (639)
.+.+||++++|+|.+...... .........++++++.+.+.+||+||++||+++..... .....+++.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~--~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~ 151 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDP--VRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDK 151 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCT--TTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSC
T ss_pred CCCeEEEEEecccCCCcccCc--ccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCC
Confidence 367999999999987543210 11112356788888888889999999999999665332 223344444332
Q ss_pred ------h----------------------hcCCceEEecCCCCcC
Q 006591 398 ------V----------------------ASRVSYMTAIGNHERD 414 (639)
Q Consensus 398 ------l----------------------~~~vP~~~v~GNHD~~ 414 (639)
+ ...+|++++.||||..
T Consensus 152 ~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 152 PCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred cchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 1378999999999973
No 28
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.79 E-value=5.1e-08 Score=102.61 Aligned_cols=86 Identities=16% Similarity=0.132 Sum_probs=58.4
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCC-cHHHHHHHHHhhhhhhc-CCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG-FLVEWDFFLHQITPVAS-RVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g-~~~~wd~f~~~l~~l~~-~vP~~ 405 (639)
+||++++|+|.+...... ..........++++++.+.+.++|+|+++||+++... ....+..+.+.++.+.. .+|++
T Consensus 1 mkilh~sD~Hlg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~ 79 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHK-PQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGC-HHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEEcccCCCCcccCC-chhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEE
Confidence 589999999987421000 0000011345677777777889999999999996542 23345666667766643 68999
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
+++||||..
T Consensus 80 ~v~GNHD~~ 88 (333)
T 1ii7_A 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCcCCCc
Confidence 999999974
No 29
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.71 E-value=3.1e-07 Score=90.13 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=50.3
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc---HHH--HHHHHHhhhhhhcC
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF---LVE--WDFFLHQITPVASR 401 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~---~~~--wd~f~~~l~~l~~~ 401 (639)
.++++++||+|.. ...++++++.+++.++|+|+++||+++.... ..+ -.++.+.++.+ .
T Consensus 25 mmki~~iSD~H~~--------------~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~--~ 88 (208)
T 1su1_A 25 MMKLMFASDIHGS--------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--A 88 (208)
T ss_dssp CCEEEEECCCTTB--------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--G
T ss_pred cEEEEEEEcCCCC--------------HHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhc--C
Confidence 3799999999953 3456777777666689999999999964321 111 13445555443 2
Q ss_pred CceEEecCCCCcC
Q 006591 402 VSYMTAIGNHERD 414 (639)
Q Consensus 402 vP~~~v~GNHD~~ 414 (639)
.|++.+.||||..
T Consensus 89 ~~v~~V~GNHD~~ 101 (208)
T 1su1_A 89 HKVIAVRGNCDSE 101 (208)
T ss_dssp GGEEECCCTTCCH
T ss_pred CceEEEECCCchH
Confidence 5899999999973
No 30
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.47 E-value=2e-07 Score=103.95 Aligned_cols=192 Identities=18% Similarity=0.135 Sum_probs=93.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc----CCC-cEEEEcCCccccCCcHH--HHHHHHHhhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN----GNV-DSVFHIGDISYATGFLV--EWDFFLHQITPV 398 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~----~~p-DfVl~~GDl~y~~g~~~--~wd~f~~~l~~l 398 (639)
..++|++++|+|........ ..+....+..+++++++ .++ ++++.+||+........ ..+...+.|..+
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~----~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l 82 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEY----GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV 82 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTT----SCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH
T ss_pred eEEEEEEecccccCccCCCC----CCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc
Confidence 46899999999975321100 01122334444444432 245 79999999984322110 122334444443
Q ss_pred hcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc--cccCCCC-C------C--CCCCeEEEEeCC--EEEEEEeC
Q 006591 399 ASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE--TYFPMPT-P------S--KDRPWYSIEQAS--VHFTVIST 465 (639)
Q Consensus 399 ~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~--~~f~~P~-~------~--~~~~~Ysfd~G~--v~fi~LDT 465 (639)
. +-+.++||||+++... . ...+. ..|+.-. + + ..+.|..++.++ +.|+.+.+
T Consensus 83 --g-~d~~~~GNHEfd~g~~--~----------l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~ 147 (516)
T 1hp1_A 83 --G-YDAMAIGNHEFDNPLT--V----------LRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTT 147 (516)
T ss_dssp --T-CCEEECCGGGGSSCHH--H----------HHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEEC
T ss_pred --C-CCEEeeccccccCCHH--H----------HHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecc
Confidence 2 3367899999964110 0 00000 0111000 0 0 013466778887 45666655
Q ss_pred CCC--CC-C----------CHHH-HHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeE
Q 006591 466 EHD--WW-L----------NSEQ-YKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDL 531 (639)
Q Consensus 466 ~~~--~~-~----------g~~Q-~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~Vdl 531 (639)
... +. + ..++ .+|++ .|++. .+...+|+++|.|............. ...+...+...+||+
T Consensus 148 ~~~~~~~~p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~~~~~~~--~~~la~~~~~~~iDl 222 (516)
T 1hp1_A 148 DDTAKIGNPEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEHGSNAPG--DVEMARALPAGSLAM 222 (516)
T ss_dssp TTTTTSSSCCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCCTTSCCC--HHHHHHHSCTTSSSE
T ss_pred cCcccccCcCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCcccccCch--HHHHHHhCCCCceeE
Confidence 421 11 1 0122 23333 34321 24567999999998543221100000 122333334456999
Q ss_pred EEeCcccccc
Q 006591 532 VLFGHVHNYE 541 (639)
Q Consensus 532 vlsGH~H~Ye 541 (639)
+|+||.|...
T Consensus 223 ilgGHtH~~~ 232 (516)
T 1hp1_A 223 IVGGHSQDPV 232 (516)
T ss_dssp EECCSSCCBC
T ss_pred EECCCCCccc
Confidence 9999999754
No 31
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.43 E-value=1.6e-06 Score=97.51 Aligned_cols=188 Identities=14% Similarity=0.067 Sum_probs=97.0
Q ss_pred CceEEEEEecCCCCCCCCCCccccC------cChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHH--HHHHHHHhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQ------PGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLV--EWDFFLHQIT 396 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~------pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~--~wd~f~~~l~ 396 (639)
..++|++++|+|...... .+.. .+....+..+++++++.++| +++.+||++....... ..+...+.+.
T Consensus 28 ~~l~Il~~~D~H~~~~~~---~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln 104 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPV---ELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMH 104 (552)
T ss_dssp CEEEEEEECCCTTCCSCE---EEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHH
T ss_pred eeEEEEEEcccccCcccc---cccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHH
Confidence 579999999999642210 0000 13345667777777666787 8899999995432111 1223333343
Q ss_pred hhhcCCceEEecCCCCcCCCCCCCccC-CCCCCCcccccccc-ccCCCCC----CCCCCeEEEEeCC--EEEEEEeCCCC
Q 006591 397 PVASRVSYMTAIGNHERDYVNSGSVYS-TPDSGGECGIPYET-YFPMPTP----SKDRPWYSIEQAS--VHFTVISTEHD 468 (639)
Q Consensus 397 ~l~~~vP~~~v~GNHD~~~~~~~~~y~-~~dsgge~~~~y~~-~f~~P~~----~~~~~~Ysfd~G~--v~fi~LDT~~~ 468 (639)
.+ . +-+.++||||+++... .... ... ...++.. ....... ...+.|..++.++ +.|+.+.+...
T Consensus 105 ~l--g-~d~~~lGNHEfd~g~~-~l~~~l~~----~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~ 176 (552)
T 2z1a_A 105 RL--R-YRAMALGNHEFDLGPG-PLADFLKG----ARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDT 176 (552)
T ss_dssp HT--T-CCEEECCGGGGTTCHH-HHHHHHTT----CCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTH
T ss_pred hc--C-CCccccccccccCCHH-HHHHHHhh----CCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccch
Confidence 32 2 3367899999964100 0000 000 0001100 0000000 0023466788887 45566655321
Q ss_pred ---------C--CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCc
Q 006591 469 ---------W--WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGH 536 (639)
Q Consensus 469 ---------~--~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH 536 (639)
. ....++.+...+.|++ .+...+|++.|.|... + ..+.++ .+||++|+||
T Consensus 177 ~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~--------d-------~~la~~~~gvDlIlgGH 238 (552)
T 2z1a_A 177 REISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE--------D-------LKLARRLVGVQVIVGGH 238 (552)
T ss_dssp HHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH--------H-------HHHHTTCSSCCEEEECS
T ss_pred hhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcch--------H-------HHHHHhCCCccEEEeCC
Confidence 0 0112333333444543 3456799999988521 0 123333 4899999999
Q ss_pred ccccce
Q 006591 537 VHNYER 542 (639)
Q Consensus 537 ~H~YeR 542 (639)
.|....
T Consensus 239 tH~~~~ 244 (552)
T 2z1a_A 239 SHTLLG 244 (552)
T ss_dssp SCCCBS
T ss_pred cCcccc
Confidence 998654
No 32
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.34 E-value=1.2e-06 Score=98.42 Aligned_cols=193 Identities=17% Similarity=0.183 Sum_probs=96.7
Q ss_pred CCceEEEEEecCCCCCCCCCC--cc----ccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHH--HHHHHHHhh
Q 006591 325 SDEMKFLAYGDMGKAPRDAST--EH----YIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLV--EWDFFLHQI 395 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~~--~~----~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~--~wd~f~~~l 395 (639)
...++|+.++|+|..-..... .. ....+....+..+++++++.++ +++|.+||++....... ......+.+
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 357999999999964321100 00 0011334556666677665555 69999999995432211 123334444
Q ss_pred hhhhcCCceEEecCCCCcCCCCCC---CccCCCCCCCcccccccc-ccC-----CCCC-CCCCCeEEEEeCCEE--EEEE
Q 006591 396 TPVASRVSYMTAIGNHERDYVNSG---SVYSTPDSGGECGIPYET-YFP-----MPTP-SKDRPWYSIEQASVH--FTVI 463 (639)
Q Consensus 396 ~~l~~~vP~~~v~GNHD~~~~~~~---~~y~~~dsgge~~~~y~~-~f~-----~P~~-~~~~~~Ysfd~G~v~--fi~L 463 (639)
..+ ... +.++||||+++.... ..+. ++..++.. ... .|.. ...+.|..++.++++ ||.+
T Consensus 103 n~l--g~d-~~~~GNHEfd~g~~~l~~~~~~------~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~ 173 (546)
T 4h2g_A 103 NAL--RYD-AMALGNHEFDNGVEGLIEPLLK------EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGY 173 (546)
T ss_dssp HHH--TCS-EEECCGGGGTTHHHHHHTTTTT------TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEE
T ss_pred Hhc--CCc-EEeccCcccccCHHHHHHHHHh------hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEe
Confidence 443 333 577999998642100 0000 00000000 000 0000 001346678888865 4555
Q ss_pred eCCCC--C-CCC-----HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEe
Q 006591 464 STEHD--W-WLN-----SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLF 534 (639)
Q Consensus 464 DT~~~--~-~~g-----~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~Vdlvls 534 (639)
.+... + .++ ....+.+++.+++........+|++.|.+... + . .+.++ .+||++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~--------d----~---~la~~~~giDlIlg 238 (546)
T 4h2g_A 174 TSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM--------D----K---LIAQKVRGVDVVVG 238 (546)
T ss_dssp ECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH--------H----H---HHHHHSTTCCEEEC
T ss_pred cccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc--------h----H---HHHHhCCCCcEEEe
Confidence 44310 0 011 12234445544443323466799999987421 1 1 12222 37999999
Q ss_pred Ccccccc
Q 006591 535 GHVHNYE 541 (639)
Q Consensus 535 GH~H~Ye 541 (639)
||.|...
T Consensus 239 GHtH~~~ 245 (546)
T 4h2g_A 239 GHSNTFL 245 (546)
T ss_dssp CSSCCCC
T ss_pred CCcCccc
Confidence 9999854
No 33
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.29 E-value=7.3e-06 Score=91.64 Aligned_cols=196 Identities=13% Similarity=0.152 Sum_probs=98.6
Q ss_pred CceEEEEEecCCCCCCCCCCc--cccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHHH--------HHHHHHh
Q 006591 326 DEMKFLAYGDMGKAPRDASTE--HYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLVE--------WDFFLHQ 394 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~--~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~~--------wd~f~~~ 394 (639)
..++|++++|+|..-...... .....+....+..+++++++.+++ +++.+||++..... .. .....+.
T Consensus 18 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~-~~~~~~~~~~~~~~~~~ 96 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPF-CNYLIAHSGSSQPLVDF 96 (527)
T ss_dssp CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHH-HHHHHHTTCSSHHHHHH
T ss_pred CcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHH-HHHHhhcccCcchHHHH
Confidence 579999999999643211000 001223456677777777776776 77889999954321 11 1223333
Q ss_pred hhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCC-------C---CCCCeEEEEeCCE--EEEE
Q 006591 395 ITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTP-------S---KDRPWYSIEQASV--HFTV 462 (639)
Q Consensus 395 l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~-------~---~~~~~Ysfd~G~v--~fi~ 462 (639)
+..+ ... +.++||||+++... ....+.+....|.- + ....|..++.+++ -||.
T Consensus 97 ln~l--g~D-~~t~GNHefd~G~~------------~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG 161 (527)
T 3qfk_A 97 YNRM--AFD-FGTLGNHEFNYGLP------------YLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIG 161 (527)
T ss_dssp HHHT--CCC-EECCCGGGGTTCHH------------HHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEE
T ss_pred HHhc--CCc-EEeccccccccCHH------------HHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEE
Confidence 3332 333 56799999864210 00000000000000 0 0134667788885 4566
Q ss_pred EeCCCC--CCC--------CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-CC-----CchhHHHHHHHHHHHHh
Q 006591 463 ISTEHD--WWL--------NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-GF-----LSVDKFFVKSVEPLLLK 526 (639)
Q Consensus 463 LDT~~~--~~~--------g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-~~-----~~~~~~~r~~l~~Ll~~ 526 (639)
+.+... +.. -....+.+++.+++.. .+...+|+++|.+...... .. ...+. ..+|..-+ .
T Consensus 162 ~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~--~~~la~~~-~ 237 (527)
T 3qfk_A 162 LTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE--GYAMLEAF-S 237 (527)
T ss_dssp EECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC--HHHHHHHH-G
T ss_pred eccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH--HHHHHHhc-C
Confidence 655421 110 0122344455444432 3466799999987643211 00 01100 11222212 2
Q ss_pred CCCeEEEeCcccccc
Q 006591 527 NKVDLVLFGHVHNYE 541 (639)
Q Consensus 527 y~VdlvlsGH~H~Ye 541 (639)
-+||++|+||.|...
T Consensus 238 ~giDlIlgGHtH~~~ 252 (527)
T 3qfk_A 238 KDIDIFITGHQHRQI 252 (527)
T ss_dssp GGCSEEECCSSCCEE
T ss_pred CCCcEEEECCCCccc
Confidence 479999999999854
No 34
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.29 E-value=8.5e-06 Score=91.71 Aligned_cols=153 Identities=14% Similarity=0.092 Sum_probs=79.5
Q ss_pred HHHHHHHHHHhhcC--C--Cc-EEEEcCCccccCCcHHHH---HHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCC
Q 006591 354 LSVVKAMSDEVNNG--N--VD-SVFHIGDISYATGFLVEW---DFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTP 425 (639)
Q Consensus 354 ~~~~~~l~~~i~~~--~--pD-fVl~~GDl~y~~g~~~~w---d~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~ 425 (639)
...+..+++++++. + +| +++.+||++.... ...+ +...+.+..+ ..+++ + ||||+++...
T Consensus 104 ~arla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~-~~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~~------- 171 (562)
T 2wdc_A 104 MGALTALIRDQKARVEAEGGKALVLDGGDTWTNSG-LSLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGRE------- 171 (562)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSH-HHHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCHH-------
T ss_pred HHHHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcch-hhhhhCCHHHHHHHHhh--CCcEE-e-cchhcccCHH-------
Confidence 44555666666544 3 88 8999999995432 2222 2334444444 56665 6 9999863110
Q ss_pred CCCCccccccccc--cCCCC-C------C--CCCCeEEEEeCCE--EEEEEeCCC-----------C--CCCCHHHHHHH
Q 006591 426 DSGGECGIPYETY--FPMPT-P------S--KDRPWYSIEQASV--HFTVISTEH-----------D--WWLNSEQYKWI 479 (639)
Q Consensus 426 dsgge~~~~y~~~--f~~P~-~------~--~~~~~Ysfd~G~v--~fi~LDT~~-----------~--~~~g~~Q~~WL 479 (639)
....+.+. |++-. + + .-+.|-.++.+++ -|+.+.+.. . +....++.+-+
T Consensus 172 -----~l~~~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (562)
T 2wdc_A 172 -----RVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEA 246 (562)
T ss_dssp -----HHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHH
T ss_pred -----HHHHHHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHH
Confidence 00000000 11000 0 0 0134667788875 455554421 0 11122333323
Q ss_pred HHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCcccccc
Q 006591 480 QKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGHVHNYE 541 (639)
Q Consensus 480 ~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH~H~Ye 541 (639)
.+.|++ .+...+|++.|.|... + ..+.++ .+||++|+||.|...
T Consensus 247 v~~l~~---~~~d~iIvLsH~g~~~--------d-------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 247 VDKARA---EGANAVVLLSHNGMQL--------D-------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp HHHHHH---TTCSEEEEEECSCHHH--------H-------HHHHTTSSSCCEEEECSSCCCC
T ss_pred HHHHHH---CCCCEEEEEeCCCCcc--------h-------HHHHhcCCCCcEEEeCCCCCCC
Confidence 333442 3456799999988521 0 123344 489999999999854
No 35
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.17 E-value=1.3e-05 Score=89.30 Aligned_cols=205 Identities=14% Similarity=0.138 Sum_probs=96.6
Q ss_pred CceEEEEEecCCCCCCCCCC----ccccCcChHHHHHHHHHHhhcCCCcEEEE-cCCccccCCcHHH---HHHHHHhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDAST----EHYIQPGSLSVVKAMSDEVNNGNVDSVFH-IGDISYATGFLVE---WDFFLHQITP 397 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~----~~~~~pg~~~~~~~l~~~i~~~~pDfVl~-~GDl~y~~g~~~~---wd~f~~~l~~ 397 (639)
..++|+.++|+|..-..... ......+....+..+++++++.+++.+++ +||++... .... .+...+.+..
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~-~~~~~~~g~~~~~~ln~ 83 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP-YISSLTKGKAIIDIMNT 83 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS-HHHHTTTTHHHHHHHTT
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc-hhhhhcCChHHHHHHHh
Confidence 46999999999954321100 00112234566777777777777886666 99998532 1111 1233333332
Q ss_pred hhcCCceEEecCCCCcCCCCCC--CccCCCCCCCc--cccccccccCCCCCCCCCCeEEEEeCCEE--EEEEeCCC----
Q 006591 398 VASRVSYMTAIGNHERDYVNSG--SVYSTPDSGGE--CGIPYETYFPMPTPSKDRPWYSIEQASVH--FTVISTEH---- 467 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge--~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~--fi~LDT~~---- 467 (639)
+ -+-+.++||||+++.... ..+. ..+.. +...+...-..|. ..+.|..++.++++ |+.+-+..
T Consensus 84 l---g~D~~tlGNHEfd~G~~~l~~~l~--~~~~p~l~aNv~~~~~~~p~--~~~py~i~e~~G~kIgiiG~t~~~~~~~ 156 (509)
T 3ive_A 84 M---PFDAVTIGNHEFDHGWDNTLLQLS--QAKFPIVQGNIFYQNSSKSF--WDKPYTIIEKDGVKIGVIGLHGVFAFND 156 (509)
T ss_dssp S---CCSEECCCGGGGTTCHHHHHHHHT--TCSSCBCCCSEEETTSCCBS--SSCSEEEEEETTEEEEEEEEECHHHHHH
T ss_pred c---CCcEEeecccccccCHHHHHHHHh--hCCCCEEEEEEEECCCCCcc--CcCCeEEEEECCEEEEEEecccCccccc
Confidence 2 234667899998642100 0000 00000 0000000000010 02346677888854 55553310
Q ss_pred -CCC------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCc--hhHHHHHHHHHHHHh-CCCeEEEeCcc
Q 006591 468 -DWW------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLS--VDKFFVKSVEPLLLK-NKVDLVLFGHV 537 (639)
Q Consensus 468 -~~~------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~--~~~~~r~~l~~Ll~~-y~VdlvlsGH~ 537 (639)
.+. .-....+.+++.+++.... ...+|+++|.+.-........ ..... ..-..+.++ -+||++|+||.
T Consensus 157 ~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~-~~d~~la~~~~giDlIlgGHt 234 (509)
T 3ive_A 157 TVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRAL-DKDIQTASQVKGLDILITGHA 234 (509)
T ss_dssp HSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCC-HHHHHHHHHCSSCCEEEEESS
T ss_pred ccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCcccccccccccccc-chHHHHHhcCCCCcEEEeCCc
Confidence 000 0122344455555544333 677999999885322110000 00000 011223333 37999999999
Q ss_pred ccc
Q 006591 538 HNY 540 (639)
Q Consensus 538 H~Y 540 (639)
|..
T Consensus 235 H~~ 237 (509)
T 3ive_A 235 HVG 237 (509)
T ss_dssp CCC
T ss_pred Ccc
Confidence 963
No 36
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.09 E-value=9.3e-06 Score=91.78 Aligned_cols=192 Identities=17% Similarity=0.147 Sum_probs=94.4
Q ss_pred CceEEEEEecCCCCCCCCCC-------ccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHH--HHHHHHHhh
Q 006591 326 DEMKFLAYGDMGKAPRDAST-------EHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLV--EWDFFLHQI 395 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~-------~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~--~wd~f~~~l 395 (639)
-.++|++++|+|..-..... ......+....+..+++++++.+++ ++|..||++....... ..+...+.|
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 90 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVM 90 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHH
Confidence 35899999999954321100 0000112355566666666655565 8999999995432111 112333444
Q ss_pred hhhhcCCceEEecCCCCcCCCCCC--CccCCCCCCCccccccc-c-cc---CCCCCCCCCCeEEEEeCCEE--EEEEeC-
Q 006591 396 TPVASRVSYMTAIGNHERDYVNSG--SVYSTPDSGGECGIPYE-T-YF---PMPTPSKDRPWYSIEQASVH--FTVIST- 465 (639)
Q Consensus 396 ~~l~~~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge~~~~y~-~-~f---~~P~~~~~~~~Ysfd~G~v~--fi~LDT- 465 (639)
..+ ... +.++||||+++.... .... . ...++. . .. ..+....-..|-.++.++++ ||.+.+
T Consensus 91 n~l--g~D-~~tlGNHEfd~G~~~l~~~~~--~----~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~~ 161 (579)
T 3ztv_A 91 NAG--NFH-YFTLGNHEFDAGNEGLLKLLE--P----LKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTV 161 (579)
T ss_dssp HHH--TCS-EEECCSGGGTTHHHHHHHHHT--T----CCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEECS
T ss_pred Hhc--CcC-eeeccccccccCHHHHHHHHH--h----cCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEcC
Confidence 333 333 467999998642100 0000 0 000000 0 00 00000001246677888854 556643
Q ss_pred C-----CCCCC---CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCc
Q 006591 466 E-----HDWWL---NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGH 536 (639)
Q Consensus 466 ~-----~~~~~---g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH 536 (639)
. ..... -....+-+++.+++........+|+++|.+... +. .+.++ -+||++|+||
T Consensus 162 ~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~--------d~-------~la~~~~giDlIlgGH 226 (579)
T 3ztv_A 162 NKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK--------NI-------EIAQKVNDIDVIVTGD 226 (579)
T ss_dssp HHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH--------HH-------HHHHHCSSCCEEEECS
T ss_pred CccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCCEEEeCC
Confidence 1 00000 012233455555544334466799999977411 11 22222 3799999999
Q ss_pred ccccc
Q 006591 537 VHNYE 541 (639)
Q Consensus 537 ~H~Ye 541 (639)
.|...
T Consensus 227 tH~~~ 231 (579)
T 3ztv_A 227 SHYLY 231 (579)
T ss_dssp SCCEE
T ss_pred CCccc
Confidence 99865
No 37
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=97.84 E-value=0.00033 Score=71.55 Aligned_cols=175 Identities=13% Similarity=0.093 Sum_probs=89.7
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccC-CcHHHHHHHHHhhhhhhcCCce
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYAT-GFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~-g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
.+|++++||++.. ||. ..+...++++++ .++|+++..||.+..+ +.. ....+.+..+ .+-+
T Consensus 4 ~m~ilf~GDv~G~-----------~G~-~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~---~~~~~~ln~~--G~Da 66 (281)
T 1t71_A 4 SIKFIFLGDVYGK-----------AGR-NIIKNNLAQLKSKYQADLVIVNAENTTHGKGLS---LKHYEFLKEA--GVNY 66 (281)
T ss_dssp CCEEEEECEEBHH-----------HHH-HHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCC---HHHHHHHHHH--TCCE
T ss_pred eEEEEEECCcCCh-----------HHH-HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcC---HHHHHHHHhc--CCCE
Confidence 5899999999832 232 233334444433 3689999999998543 332 2222333322 3443
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCC----CCCCeEEEEeCCEEE--EEEeCCCCCC--CCHHHH
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPS----KDRPWYSIEQASVHF--TVISTEHDWW--LNSEQY 476 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~----~~~~~Ysfd~G~v~f--i~LDT~~~~~--~g~~Q~ 476 (639)
.++||||+++.. ..+..-+. . ...-...| |... .++.|.-++.+++++ |.+-+...+. .-..-.
T Consensus 67 -~TlGNHefD~g~--~~~~~l~~--~-~~v~~aN~--p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf 138 (281)
T 1t71_A 67 -ITMGNHTWFQKL--DLAVVINK--K-DLVRPLNL--DTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPF 138 (281)
T ss_dssp -EECCTTTTCCGG--GHHHHTTC--T-TEECBSCB--CTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHH
T ss_pred -EEEccCcccCCc--cHHHHhhh--c-CEEeeccC--CcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHH
Confidence 567999997530 00000000 0 00000011 1111 234677788887554 5444432122 112224
Q ss_pred HHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 477 KWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 477 ~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
+-+++.++ +.+...+|+.+|.-. ..+ .+.+.. .-.-+||+++.||.|...
T Consensus 139 ~~a~~~v~---~~~~diIIv~~H~g~----------t~E-k~~la~-~~dg~VD~VvGgHTHv~t 188 (281)
T 1t71_A 139 KVLKELIL---KRDCDLHIVDFHAET----------TSE-KNAFCM-AFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp HHHHHHHT---TCCCSEEEEEEECSC----------HHH-HHHHHH-HHTTTSSEEEEESSSSCC
T ss_pred HHHHHHHh---hcCCCEEEEEeCCCc----------hHH-HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 44555555 346778999999521 111 122222 123469999999999854
No 38
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=97.76 E-value=0.00016 Score=76.11 Aligned_cols=55 Identities=15% Similarity=0.133 Sum_probs=33.0
Q ss_pred ceEEEEEecCCCCCCCC--CCccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCcccc
Q 006591 327 EMKFLAYGDMGKAPRDA--STEHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYA 381 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~--~~~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~ 381 (639)
.++|+..+|+|..-... ........+....+..+++++++..++ ++|..||++..
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qG 68 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQG 68 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCS
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCC
Confidence 58999999999653211 000011223345566666666655555 67789999943
No 39
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=97.74 E-value=0.00028 Score=79.16 Aligned_cols=87 Identities=16% Similarity=0.130 Sum_probs=44.1
Q ss_pred CceEEEEEecCCCCCCCCCCc-ccc-CcChHHHHHHHHHHh-hcCCCc-EEEEcCCccccCCcHH----HHHHHHHhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTE-HYI-QPGSLSVVKAMSDEV-NNGNVD-SVFHIGDISYATGFLV----EWDFFLHQITP 397 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~-~~~-~pg~~~~~~~l~~~i-~~~~pD-fVl~~GDl~y~~g~~~----~wd~f~~~l~~ 397 (639)
..++|+.++|+|........+ .+. .-|....+...+++. ++.+++ +++.+||++....... ..+...+.|..
T Consensus 14 ~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~ 93 (557)
T 3c9f_A 14 NDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIK 93 (557)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTT
T ss_pred eEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHHh
Confidence 479999999999753221100 011 011122222233332 235678 5799999995432111 11122233332
Q ss_pred hhcCCceEEecCCCCcCC
Q 006591 398 VASRVSYMTAIGNHERDY 415 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~ 415 (639)
+ ..- +.++||||+++
T Consensus 94 l--g~D-a~tlGNHEfD~ 108 (557)
T 3c9f_A 94 Q--DYD-LLTIGNHELYL 108 (557)
T ss_dssp S--CCS-EECCCGGGSSS
T ss_pred c--CCC-EEeecchhccc
Confidence 2 333 56789999974
No 40
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=97.68 E-value=0.00034 Score=73.58 Aligned_cols=56 Identities=9% Similarity=0.112 Sum_probs=35.0
Q ss_pred CceEEEEEecCCCCCCCC--CCccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCcccc
Q 006591 326 DEMKFLAYGDMGKAPRDA--STEHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYA 381 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~--~~~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~ 381 (639)
-.++|+..+|+|..-... ........+....+..+++++++..++ ++|..||++..
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qG 65 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQG 65 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCC
Confidence 368999999999643211 000011223456667777777666665 77899999943
No 41
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.67 E-value=0.00086 Score=74.81 Aligned_cols=185 Identities=18% Similarity=0.191 Sum_probs=90.0
Q ss_pred ceEEEEEecCCCCCCCCC--Cc----cccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHHH--HHHHHHhhhh
Q 006591 327 EMKFLAYGDMGKAPRDAS--TE----HYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLVE--WDFFLHQITP 397 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~--~~----~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~~--wd~f~~~l~~ 397 (639)
.++|+..+|+|..-.... .. ....-|....+..+++++++.+++ ++|..||++........ .+...+.|..
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 479999999995432110 00 000112344556666666555555 77789999954321111 1122222222
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCC-------------CCCCCeEEEEeCCEE--EEE
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTP-------------SKDRPWYSIEQASVH--FTV 462 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~-------------~~~~~~Ysfd~G~v~--fi~ 462 (639)
+ . .=..++||||+++.... .. .. .-.+ ..|++-.. ..-..|--++.++++ ||.
T Consensus 83 l--g-yDa~~lGNHEFd~G~~~-l~-~~-~~~~------a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviG 150 (530)
T 4h1s_A 83 L--R-YDAMALGNHEFDNGVEG-LI-EP-LLKE------AKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVG 150 (530)
T ss_dssp T--T-CCEEECCGGGGTTTTHH-HH-TT-TTTT------CSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEE
T ss_pred c--C-CCEEEEchhhhccCHHH-HH-HH-HHhh------CCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeecc
Confidence 2 1 22568999999752110 00 00 0000 01111000 001346778888855 555
Q ss_pred EeCCCC-----------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCe
Q 006591 463 ISTEHD-----------WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVD 530 (639)
Q Consensus 463 LDT~~~-----------~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~Vd 530 (639)
+-+..- +...-+..+...+.|++ .+..-+|++.|.... .+ ..+.++. +||
T Consensus 151 ltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~--------~d-------~~la~~v~giD 212 (530)
T 4h1s_A 151 YTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE--------MD-------KLIAQKVRGVD 212 (530)
T ss_dssp EECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH--------HH-------HHHHHHSTTCC
T ss_pred ccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch--------HH-------HHHHhcCCCCC
Confidence 554320 01112223333344543 356679999996421 11 1233343 799
Q ss_pred EEEeCcccccc
Q 006591 531 LVLFGHVHNYE 541 (639)
Q Consensus 531 lvlsGH~H~Ye 541 (639)
++|.||.|.+-
T Consensus 213 ~IlgGHsH~~~ 223 (530)
T 4h1s_A 213 VVVGGHSNTFL 223 (530)
T ss_dssp EEECCSSCCCB
T ss_pred eeccCCcccee
Confidence 99999999754
No 42
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.62 E-value=0.0011 Score=66.65 Aligned_cols=172 Identities=17% Similarity=0.220 Sum_probs=89.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCcccc-CCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYA-TGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~-~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
+|++++||.=. .|| ...++.+++++++.. |+++..|..+.. .+.. +...+.|..+ .+-++
T Consensus 1 m~ilfiGDi~g-----------~~G-~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~---~~~~~~l~~~--G~D~~- 61 (252)
T 2z06_A 1 MRVLFIGDVMA-----------EPG-LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD---RRSYRLLREA--GVDLV- 61 (252)
T ss_dssp CEEEEECCBCH-----------HHH-HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC---HHHHHHHHHH--TCCEE-
T ss_pred CEEEEEEecCC-----------ccc-HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC---HHHHHHHHhC--CCCEE-
Confidence 58999999632 123 245666666766666 988887666533 3333 2222333322 45555
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEe--CCCCCCCCHHHHHHHHHHHh
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVIS--TEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LD--T~~~~~~g~~Q~~WL~~~La 484 (639)
+.||||++... ....-+. ... -.--++|.....+.|.-++.++.++-+++ .......-..-.+-+++.++
T Consensus 62 T~GNHefD~~~---l~~~l~~----~~~-vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~ 133 (252)
T 2z06_A 62 SLGNHAWDHKE---VYALLES----EPV-VRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLE 133 (252)
T ss_dssp ECCTTTTSCTT---HHHHHHH----SSE-ECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHH
T ss_pred EeccEeeECch---HHHHhcc----CCc-eEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHH
Confidence 67999997421 0000000 000 00011222222456888999887766655 33211111112333555666
Q ss_pred hccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 485 SVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 485 ~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
+.. .+.+|+.+|--. ..+ .+.+.. .-.-+||+++.||+|...
T Consensus 134 ~lk---~d~IIv~~H~g~----------tse-k~~la~-~~dg~Vd~VvGgHTHv~t 175 (252)
T 2z06_A 134 EEK---ADYVLVEVHAEA----------TSE-KMALAH-YLDGRASAVLGTHTHVPT 175 (252)
T ss_dssp HCC---CSEEEEEEECSC----------HHH-HHHHHH-HHBTTBSEEEEESSCSCB
T ss_pred HhC---CCEEEEEeCCCc----------HHH-HHHHHH-hCCCCeEEEEcCCCCcCC
Confidence 542 677999999532 111 122222 234579999999999844
No 43
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.60 E-value=0.0016 Score=65.55 Aligned_cols=174 Identities=14% Similarity=0.072 Sum_probs=89.4
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC-CcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT-GFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~-g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
+|++++||.=. ++| ...++.+++++++.. |+++..|+.+..+ +... ...+.+..+ .+-+ .
T Consensus 1 m~ilf~GDv~g-----------~~G-~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~~--G~Da-~ 61 (255)
T 1t70_A 1 MRVLFIGDVFG-----------QPG-RRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALEA--GAGC-L 61 (255)
T ss_dssp CEEEEECCBBH-----------HHH-HHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHHH--TCSE-E
T ss_pred CEEEEEeccCC-----------hHH-HHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHhC--CCCE-E
Confidence 58999999641 122 345566666766655 9999988887543 3322 222333222 4444 4
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCC-CCCCCCCeEEEEeCCEEE--EEEeCCCCCCCCHHHHHHHHHHH
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMP-TPSKDRPWYSIEQASVHF--TVISTEHDWWLNSEQYKWIQKDL 483 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P-~~~~~~~~Ysfd~G~v~f--i~LDT~~~~~~g~~Q~~WL~~~L 483 (639)
++||||+++.. ....-+. ...... .--+.| ....++.|.-++.++.++ +.|-+......-..-.+-+++.+
T Consensus 62 TlGNHefD~~~---l~~~l~~--~~~~~~-~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v 135 (255)
T 1t70_A 62 TLGNHAWHHKD---IYPMLSE--DTYPIV-RPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALL 135 (255)
T ss_dssp ECCTTTTSSTT---HHHHHHT--TCSCEE-CCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHT
T ss_pred EeccccccCch---HHHHHhh--CCCcEE-EEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHH
Confidence 56999997421 0000000 000000 000112 222245677788887554 44444422111222234466666
Q ss_pred hhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 484 ASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 484 a~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
++. +...+|+.+|.-. ..+ .+.+.. .-+-+||+++.||.|...
T Consensus 136 ~~l---~~d~IIv~~H~e~----------t~E-k~~la~-~~dg~vd~VvGgHTHv~~ 178 (255)
T 1t70_A 136 ERD---DLGTVFVDFHAEA----------TSE-KEAMGW-HLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp TCS---SCCEEEEEEECSC----------HHH-HHHHHH-HHTTSSSEEEEESSCSCB
T ss_pred HHh---CCCEEEEEeCCCC----------hHH-HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 654 4677999999421 111 122222 223469999999999854
No 44
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=97.17 E-value=0.00039 Score=68.20 Aligned_cols=68 Identities=21% Similarity=0.194 Sum_probs=47.5
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
...+++++||+|.. ...++++++.+.. .++|.++++||+++.+.... +.++.+. ..++
T Consensus 11 ~~~~i~visDiHg~--------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~---~~~~~l~----~~~~ 69 (221)
T 1g5b_A 11 KYRNIWVVGDLHGC--------------YTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV---ECLELIT----FPWF 69 (221)
T ss_dssp GCSCEEEECCCTTC--------------HHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH---HHHGGGG----STTE
T ss_pred CCceEEEEEcCCCC--------------HHHHHHHHHHccCCCCCCEEEEeCCccCCCCChH---HHHHHHh----cCCE
Confidence 35799999999932 3456777777654 37899999999996543321 2223222 3589
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
+.+.||||..
T Consensus 70 ~~v~GNhd~~ 79 (221)
T 1g5b_A 70 RAVRGNHEQM 79 (221)
T ss_dssp EECCCHHHHH
T ss_pred EEEccCcHHH
Confidence 9999999963
No 45
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.16 E-value=0.00033 Score=70.98 Aligned_cols=66 Identities=14% Similarity=0.221 Sum_probs=46.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
.+++++||+|.. ...++++++.+...++ |.++++||+++.+.... +.++.+.. .+++.
T Consensus 19 ~~i~visDiHg~--------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~---~~l~~l~~----~~~~~ 77 (262)
T 2qjc_A 19 GRVIIVGDIHGC--------------RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSF---GVVRLLKR----LGAYS 77 (262)
T ss_dssp SCEEEECCCTTC--------------HHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHH---HHHHHHHH----HTCEE
T ss_pred CeEEEEeCCCCC--------------HHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHH---HHHHHHHH----CCCEE
Confidence 499999999932 3557777777765555 99999999996543322 23333332 37999
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 78 v~GNHd~~ 85 (262)
T 2qjc_A 78 VLGNHDAK 85 (262)
T ss_dssp CCCHHHHH
T ss_pred EeCcChHH
Confidence 99999973
No 46
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.08 E-value=0.00062 Score=69.70 Aligned_cols=68 Identities=19% Similarity=0.205 Sum_probs=46.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
++++++||+|.. ...+.++++.+.. .++|.++++||+++.+.... +.++.+..+ ..+++.
T Consensus 1 M~i~vigDiHG~--------------~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~---~~l~~l~~l--~~~~~~ 61 (280)
T 2dfj_A 1 MATYLIGDVHGC--------------YDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL---DVLRYVKSL--GDSVRL 61 (280)
T ss_dssp -CEEEECCCCSC--------------HHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH---HHHHHHHHT--GGGEEE
T ss_pred CeEEEEecCCCC--------------HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH---HHHHHHHhC--CCceEE
Confidence 478999999942 3556777777654 46899999999996543332 233333333 237999
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 62 v~GNHe~~ 69 (280)
T 2dfj_A 62 VLGNHDLH 69 (280)
T ss_dssp CCCHHHHH
T ss_pred EECCCcHH
Confidence 99999963
No 47
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.88 E-value=0.0089 Score=51.20 Aligned_cols=92 Identities=17% Similarity=0.201 Sum_probs=55.7
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEE
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHT 288 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~ 288 (639)
..|..+.+.......+++.|+|...... .-.|+|...+..... .+..... .+....
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~---~~~~~~~----------------~~~~~~ 70 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPID---DWIMETI----------------SGDRLT 70 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTT---TSEEEEE----------------ETTCCE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCcc---ceEEEEE----------------CCCceE
Confidence 5677777766533468999999965432 126677643221100 0000000 011235
Q ss_pred EEecCCCCCcEEEEEEccCC----CccceeeEEECCCCCC
Q 006591 289 AVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAGG 324 (639)
Q Consensus 289 a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~g 324 (639)
++|++|+|+|.|.+||..-+ ..||....|+|.+.+.
T Consensus 71 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 110 (114)
T 2ede_A 71 HQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSG 110 (114)
T ss_dssp EEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSC
T ss_pred EEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCC
Confidence 78999999999999996522 2478889999987654
No 48
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.53 E-value=0.012 Score=50.04 Aligned_cols=88 Identities=18% Similarity=0.336 Sum_probs=53.2
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.. ...+++.|.|...... .-.|+|...+.... ..... .+...
T Consensus 11 P~~P~~l~~~~--~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~-~~~~~---------------------~~~~~ 66 (111)
T 1x5l_A 11 PSQVVVIRQER--AGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQ-SYSTL---------------------KAVTT 66 (111)
T ss_dssp CCCCCCEECSC--BCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCS-SCEEE---------------------EESSS
T ss_pred CCCCceEEEEE--cCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCce-eEEEe---------------------cCCCC
Confidence 55565555443 3458999999865322 12667764332110 00000 01123
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAGG 324 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~g 324 (639)
..+|++|+|++.|.+||..-+ ..||....|+|++.++
T Consensus 67 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 107 (111)
T 1x5l_A 67 RATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSG 107 (111)
T ss_dssp EEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCC
Confidence 578999999999999996521 2488899999987654
No 49
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.50 E-value=0.027 Score=48.55 Aligned_cols=88 Identities=18% Similarity=0.231 Sum_probs=54.1
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCC-CC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGD-KE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~-~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
.|..|..+++... ..+++.|.|.... .. .-.|+|...+...+. .... . . +.
T Consensus 17 ~P~~P~~l~~~~~--~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~---~~~~------~---~---------~~ 73 (120)
T 1x5f_A 17 LPSAPRDVVASLV--STRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARER---VENT------S---H---------PG 73 (120)
T ss_dssp CCCCCEEEEEEEE--CSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCE---EEEC------S---S---------TT
T ss_pred CCCCCCCcEEEec--CCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCce---EEEe------c---c---------CC
Confidence 3667777766554 3578999999654 21 136777654322110 0000 0 0 01
Q ss_pred EEEEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~ 322 (639)
...++|++|+|+|.|.+||..-+ . .||....|+|.+.
T Consensus 74 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 74 EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp CSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 23578999999999999997522 1 4788889999754
No 50
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.48 E-value=0.023 Score=50.10 Aligned_cols=86 Identities=14% Similarity=0.178 Sum_probs=54.2
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
|..|..+++.... .+++.|+|...... .-.|+|...+.... ..... +
T Consensus 19 p~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~-~~~~~------------~--------- 74 (123)
T 2edd_A 19 MLPPVGVQAVALT--HDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASA-KYKSE------------D--------- 74 (123)
T ss_dssp SCCCEEEEEEEEE--TTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTC-CCCCE------------E---------
T ss_pred CCCCcceEEEEcC--CCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCc-cEEEE------------e---------
Confidence 5577777765543 58999999954321 23677775432100 00000 0
Q ss_pred ceEEEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
.....++|+||+|+|.|.++|..- ...||....|+|.+.
T Consensus 75 ~~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 75 TTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp ESSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 012367999999999999999653 235899999999865
No 51
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=96.48 E-value=0.003 Score=66.44 Aligned_cols=74 Identities=19% Similarity=0.136 Sum_probs=46.2
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc--------CCCcEEEEcCCccccCCcHHHHHHHHHhhhh-
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN--------GNVDSVFHIGDISYATGFLVEWDFFLHQITP- 397 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--------~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~- 397 (639)
..+++++||+|.. ...+.++++.+.. .++|.++++||+++.+....+--.++..++.
T Consensus 70 ~~~i~vigDiHG~--------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~ 135 (342)
T 2z72_A 70 IKKVVALSDVHGQ--------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQ 135 (342)
T ss_dssp CCEEEEECCCTTC--------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCC--------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHH
Confidence 4799999999942 3456666665431 1579999999999754433221112222211
Q ss_pred -hhcCCceEEecCCCCcC
Q 006591 398 -VASRVSYMTAIGNHERD 414 (639)
Q Consensus 398 -l~~~vP~~~v~GNHD~~ 414 (639)
.....+++.+.||||..
T Consensus 136 ~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 136 ARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HHHTTCEEEECCCHHHHH
T ss_pred HhhCCCeEEEEecCCcHH
Confidence 12345799999999973
No 52
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=96.47 E-value=0.0049 Score=63.82 Aligned_cols=70 Identities=16% Similarity=0.147 Sum_probs=46.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~ 405 (639)
.+++++||+|. ....+.++++.+.....+.++++||+++.+....+ .+..+..+. ..-.++
T Consensus 50 ~~i~viGDIHG--------------~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~ 112 (309)
T 2ie4_C 50 CPVTVCGDVHG--------------QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRYRERIT 112 (309)
T ss_dssp SSEEEECCCTT--------------CHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEE
T ss_pred CCEEEEecCCC--------------CHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHH---HHHHHHHHHhhCCCcEE
Confidence 57999999994 24556677776655667888999999965443322 223332221 133589
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.+.||||..
T Consensus 113 ~lrGNHE~~ 121 (309)
T 2ie4_C 113 ILRGNHESR 121 (309)
T ss_dssp ECCCTTSST
T ss_pred EEeCCCCHH
Confidence 999999974
No 53
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.40 E-value=0.02 Score=48.54 Aligned_cols=87 Identities=21% Similarity=0.283 Sum_probs=52.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++... ..+++.|.|....... -.|+|...+..... .... .+...
T Consensus 8 P~~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~~~---------------------~~~~~ 63 (108)
T 2djs_A 8 PSTVPIMHQVSA--TMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFN-SSMA---------------------RSQTN 63 (108)
T ss_dssp CCCCSCCEEEEE--CSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTT-CEEE---------------------EESSS
T ss_pred CCCCcceEEEec--CCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcc-eeEE---------------------ecCcc
Confidence 556666666543 3579999998654322 25566543321110 0000 01113
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
.++|+||+|+|.|.+||..-+ ..||....|+|.+..
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 64 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 578999999999999997521 247888999998754
No 54
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.40 E-value=0.013 Score=50.03 Aligned_cols=88 Identities=15% Similarity=0.224 Sum_probs=53.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.... .+++.|.|...... .-.|+|...+........... . .. .
T Consensus 8 P~~p~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~------------~-------~~--~ 64 (109)
T 2e7h_A 8 PPAVSDIRVTRSS--PSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLK------------T-------SE--N 64 (109)
T ss_dssp SCCCCCCEEEEEE--TTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEE------------E-------SS--S
T ss_pred CCCCCccEEEecC--CCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEc------------c-------CC--C
Confidence 5566666666543 47999999865322 126777644311110000000 0 01 1
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
.++|+||+|+|.|.+||..-+ ..||....|+|.+.+
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 65 RAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp EEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred EEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 678999999999999997522 248888999998754
No 55
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=96.30 E-value=0.0075 Score=62.99 Aligned_cols=70 Identities=13% Similarity=0.078 Sum_probs=46.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhh--hcCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPV--ASRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l--~~~vP~~ 405 (639)
.+++++||+|. ....+.++++.+.....|-++++||+++.+....+ .+..+..+ ...-.++
T Consensus 57 ~~i~viGDIHG--------------~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~ 119 (330)
T 1fjm_A 57 APLKICGDIHG--------------QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE---TICLLLAYKIKYPENFF 119 (330)
T ss_dssp SSEEEECBCTT--------------CHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEE
T ss_pred CceEEecCCCC--------------CHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChHH---HHHHHHHhhhhcCCceE
Confidence 36999999994 34567777777655567889999999975443322 22322222 1234589
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.+.||||..
T Consensus 120 ~lrGNHE~~ 128 (330)
T 1fjm_A 120 LLRGNHECA 128 (330)
T ss_dssp ECCCTTSSH
T ss_pred EecCCchHh
Confidence 999999963
No 56
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=96.19 E-value=0.044 Score=46.44 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=53.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.......+++.|+|....... -.|+|...+...+.. .. . ...
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~------~~--------~----------~~~ 63 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWAS------QR--------A----------ASN 63 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEE------EE--------E----------SSS
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEE------ec--------C----------Ccc
Confidence 567777766653334689999999654322 256665433211110 00 0 001
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
.++|++|+|+|.|.+||..-+ ..||....|+|.+
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 64 FTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 578999999999999996522 2478888999854
No 57
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.18 E-value=0.064 Score=45.98 Aligned_cols=90 Identities=16% Similarity=0.238 Sum_probs=53.0
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCC--C----C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDK--E----P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~--~----~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
..|..++.... ..+++.|+|..... . . -.|+|...+..... .+.... . .+-.
T Consensus 10 ~~P~~~~~~~~--~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~---~~~~~~----~------------~~~~ 68 (114)
T 1x4y_A 10 AGPYITFTDAV--NETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDS---DYKKDM----V------------EGDR 68 (114)
T ss_dssp SCCEEEEEECS--SSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGG---GCCCEE----E------------ETTC
T ss_pred CCCeEEEEEec--CCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCc---ceeeEe----c------------CCcE
Confidence 45665555543 35899999996531 1 1 26777643321000 000000 0 0111
Q ss_pred EEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPAGG 324 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~~g 324 (639)
..++|++|+|+|.|.++|..- ...+|....|+|.+.+.
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 357899999999999999642 23588889999976543
No 58
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=96.17 E-value=0.013 Score=60.83 Aligned_cols=74 Identities=19% Similarity=0.146 Sum_probs=44.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
...+++++||+|.. ...+.++++.+... ..+.++++||+++.+....+--.++..++. ...-.+
T Consensus 58 ~~~ri~viGDIHG~--------------~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~-~~p~~v 122 (315)
T 3h63_A 58 ETEKITVCGDTHGQ--------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKL-LYPDHF 122 (315)
T ss_dssp TTCEEEEECCCTTC--------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHH-HSTTTE
T ss_pred CCceEEEEecCCCC--------------HHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhh-hcCCcE
Confidence 35799999999943 44566666665433 234699999999754433221112222211 123358
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
+.+.||||..
T Consensus 123 ~~lrGNHE~~ 132 (315)
T 3h63_A 123 HLLRGNHETD 132 (315)
T ss_dssp EEECCTTSSH
T ss_pred EEEecCcccc
Confidence 8999999963
No 59
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.14 E-value=0.056 Score=45.22 Aligned_cols=86 Identities=26% Similarity=0.334 Sum_probs=52.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
|..|..+.+.... .++++|.|...... .-.|+|...+... .+..- . . ......
T Consensus 8 P~~P~~~~~~~~~--~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~-----~~~~~---~-----~---------~~~~~~ 63 (106)
T 2dju_A 8 PKPPIDLVVTETT--ATSVTLTWDSGNSEPVTYYGIQYRAAGTEG-----PFQEV---D-----G---------VATTRY 63 (106)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEECCCSSCCSEEEEEEEETTCCS-----CCCCB---C-----C---------CCSSEE
T ss_pred CcCCCCcEEEecc--CCEEEEEEcCCCCCCceEEEEEEEECCCCC-----CeEEc---c-----C---------CCccEE
Confidence 5567766665543 47999999965322 2367776433211 01100 0 0 011246
Q ss_pred EecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 290 VMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
+|++|+|++.|.|||..-+ ..+|....++|.+.
T Consensus 64 ~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 64 SIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred EEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCC
Confidence 8899999999999997522 24778888998764
No 60
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=96.09 E-value=0.011 Score=60.68 Aligned_cols=70 Identities=14% Similarity=0.082 Sum_probs=45.6
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
+++++||+|. ....+.++.+.+.....+-++++||+++.+....+--.++-.++ +...-.++.+.
T Consensus 57 ~i~viGDIHG--------------~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk-~~~p~~v~~lr 121 (299)
T 3e7a_A 57 PLKICGDIHG--------------QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK-IKYPENFFLLR 121 (299)
T ss_dssp SEEEECBCTT--------------CHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHH-HHSTTTEEECC
T ss_pred CEEEEecCCC--------------CHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHHHHHHHHHHH-hhCCCcEEEEe
Confidence 6999999994 34567777777665667889999999976544322111111111 11234589999
Q ss_pred CCCCc
Q 006591 409 GNHER 413 (639)
Q Consensus 409 GNHD~ 413 (639)
||||.
T Consensus 122 GNHE~ 126 (299)
T 3e7a_A 122 GNHEC 126 (299)
T ss_dssp CTTSS
T ss_pred cCchh
Confidence 99996
No 61
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=96.08 E-value=0.016 Score=49.18 Aligned_cols=88 Identities=16% Similarity=0.271 Sum_probs=52.1
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC--CC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK--EP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+.... .+ +.|+|..... .. -.|+|...+...+... ...... .+-.
T Consensus 7 P~~P~~~~~~~~~--~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~-~~~~~~-----------------~~~~ 65 (105)
T 2haz_A 7 PSSPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK-WYDAKE-----------------ASME 65 (105)
T ss_dssp CCCCEEEEEEECS--SC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE-EEEHHH-----------------HHHH
T ss_pred CcCCCCCEEEEcC--Cc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccc-eEEccc-----------------cCCc
Confidence 5567666665543 34 9999996532 11 2677875443212110 000000 0111
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
..++|+||+|+|.|.+||..-+ ..+|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 3578999999999999996521 2478888999986
No 62
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=96.07 E-value=0.016 Score=60.57 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=45.6
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
+..+++++||+|. ....+.++.+.+..... +.++++||+++.+....+--.++..++. ...-.+
T Consensus 62 ~~~ri~viGDIHG--------------~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~-~~p~~v 126 (335)
T 3icf_A 62 PDVKISVCGDTHG--------------QFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKI-LHPNNF 126 (335)
T ss_dssp TTCEEEEECCCTT--------------CHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHH-HCTTTE
T ss_pred cCceEEEEecCCC--------------CHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhh-hCCCcE
Confidence 4689999999994 34556667776644333 4699999999654433221112222211 123458
Q ss_pred EEecCCCCc
Q 006591 405 MTAIGNHER 413 (639)
Q Consensus 405 ~~v~GNHD~ 413 (639)
+.+.||||.
T Consensus 127 ~llrGNHE~ 135 (335)
T 3icf_A 127 FLNRGNHES 135 (335)
T ss_dssp EECCCTTSS
T ss_pred EEecCchhh
Confidence 999999995
No 63
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=96.05 E-value=0.072 Score=57.97 Aligned_cols=139 Identities=17% Similarity=0.226 Sum_probs=78.2
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-----------cCCCcEEEEcCCccccCCcH---------
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-----------NGNVDSVFHIGDISYATGFL--------- 385 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-----------~~~pDfVl~~GDl~y~~g~~--------- 385 (639)
.+..+++++|+|.+.... .....++.+.+.+. ..++.-+|++||.+...+..
T Consensus 199 ~~~~ialVSGL~igs~~~--------~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y 270 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGG--------ESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKY 270 (476)
T ss_dssp SCCEEEEECCCCBTSSCH--------HHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------
T ss_pred CCCEEEEECCcccCCCcc--------cchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhc
Confidence 457999999999875421 00122333333221 25788999999999654220
Q ss_pred ----------HHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc-cccCCCC-----CCCCCC
Q 006591 386 ----------VEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE-TYFPMPT-----PSKDRP 449 (639)
Q Consensus 386 ----------~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~-~~f~~P~-----~~~~~~ 449 (639)
.+.+.+-+.+..+...+|+...|||||-.. +..|.. ++. ..|+... ..-.+.
T Consensus 271 ~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~------~~lPQq------plh~~lfp~s~~~~~~~~vtNP 338 (476)
T 3e0j_A 271 LTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTN------YTLPQQ------PLHPCMFPLATAYSTLQLVTNP 338 (476)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSC------SSSSCC------CCCTTSCHHHHTSTTEEECCSS
T ss_pred cccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCccc------ccCCCC------CcCHHHhhhhhhcCccEEeCCC
Confidence 233455556666778999999999999631 111211 111 1111000 001223
Q ss_pred eEEEEeCCEEEEEEeCCC-----CCCCCHHHHHHHHHHHhh
Q 006591 450 WYSIEQASVHFTVISTEH-----DWWLNSEQYKWIQKDLAS 485 (639)
Q Consensus 450 ~Ysfd~G~v~fi~LDT~~-----~~~~g~~Q~~WL~~~La~ 485 (639)
|.|++++++|++..... .+...+.-++.|+..|+-
T Consensus 339 -~~~~i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 339 -YQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp -EEEEETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred -eEEEECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 46999999999875431 012233456788888874
No 64
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.00 E-value=0.034 Score=47.80 Aligned_cols=87 Identities=17% Similarity=0.240 Sum_probs=53.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.... .+++.|.|....... -.|+|...+...... ... . . ....
T Consensus 18 P~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~---~~~------~---~---------~~~~ 74 (119)
T 2ed7_A 18 PSAPRDVVPVLVS--SRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERA---LNT------T---Q---------PGSL 74 (119)
T ss_dssp CCCCSCCEEEEEC--SSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEE---EEC------C---C---------TTCC
T ss_pred CcCCcceEEEecC--CCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCccee---eEe------e---c---------CCce
Confidence 6677777766543 579999998654322 256665433221100 000 0 0 1123
Q ss_pred EEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
..+|++|+|++.|.+||..- ...+|....++|.+.
T Consensus 75 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 75 QLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 57899999999999998642 124788888998764
No 65
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=95.91 E-value=0.058 Score=46.09 Aligned_cols=37 Identities=32% Similarity=0.486 Sum_probs=30.3
Q ss_pred EEecCCCCCcEEEEEEccCC----CccceeeEEECCCCCCC
Q 006591 289 AVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAGGS 325 (639)
Q Consensus 289 a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~g~ 325 (639)
++|+||+|+|.|.+||...+ ..||....|+|.+.+++
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 78999999999999997522 35888899999887553
No 66
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.88 E-value=0.03 Score=48.51 Aligned_cols=86 Identities=15% Similarity=0.227 Sum_probs=53.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
|..|..++..... .+++.|+|.-.... .-.|+|..... ... .+... .
T Consensus 9 p~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~-~~~---~~~~~------------------~ 64 (113)
T 1x5j_A 9 MMPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIP-ANT---KYKNA------------------N 64 (113)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSS-SSC---CCEEC------------------C
T ss_pred CCCCcceEEEEec--CCEEEEEecCCCCccccccCcCceEEEEEEECCC-CCe---EEEEE------------------e
Confidence 4567777776543 58999999854321 23567764211 000 00000 0
Q ss_pred ceEEEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
+....++|+||+|+|.|.++|..- ...||....++|.+.
T Consensus 65 ~~~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 65 ATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp BCSSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCcCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 112368999999999999999752 125888889999765
No 67
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=95.85 E-value=0.016 Score=61.00 Aligned_cols=70 Identities=14% Similarity=0.121 Sum_probs=45.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~ 405 (639)
.+++++||+|.. ...+.++.+.......+-++++||+++.+....+ .+..+..+. ..-.++
T Consensus 70 ~pi~ViGDIHG~--------------~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~E---vl~lL~~lk~~~p~~v~ 132 (357)
T 3ll8_A 70 APVTVCGDIHGQ--------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE---CVLYLWALKILYPKTLF 132 (357)
T ss_dssp SSEEEECCCTTC--------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEE
T ss_pred ccceeeccCCCC--------------HHHHHHHHHhcCCCCCcEEEECCCccCCCcChHH---HHHHHHHhhhhcCCcEE
Confidence 369999999943 4556667776655667889999999965433322 122222221 233589
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.+.||||..
T Consensus 133 llrGNHE~~ 141 (357)
T 3ll8_A 133 LLRGNHECR 141 (357)
T ss_dssp ECCCTTSSH
T ss_pred EEeCchhhh
Confidence 999999963
No 68
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.84 E-value=0.05 Score=46.36 Aligned_cols=86 Identities=21% Similarity=0.286 Sum_probs=51.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
|..|..+++... ..+++.|+|...... .-.|+|...+.... ..... +.....
T Consensus 18 P~~P~~l~~~~~--~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~-------~~~~~----------------~~~~~~ 72 (115)
T 1x5z_A 18 PGQPLNFKAEPE--SETSILLSWTPPRSDTIANYELVYKDGEHGEE-------QRITI----------------EPGTSY 72 (115)
T ss_dssp CCCCEEEEEECS--SSSEEEEEEECCSCCCCCEEEECBEESSSCCC-------BCCEE----------------CSSSEE
T ss_pred CCCCccCEeeeC--CCCEEEEEEcCCCCCCccEEEEEEEeCCCCCc-------eEEec----------------CCCcEE
Confidence 556766666543 458999999965432 12555553322111 00000 001357
Q ss_pred EecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 290 VMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
+|+||+|+|.|.+||..-+ ..||....|+|.+..
T Consensus 73 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 73 RLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp EEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred EECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 8999999999999997522 247788899997653
No 69
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=95.79 E-value=0.099 Score=44.28 Aligned_cols=88 Identities=18% Similarity=0.153 Sum_probs=49.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+++.- -+.+++.|+|.-.... .-.|+|...+...... .... + +-...++
T Consensus 3 p~~P~~l~v~~--~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~--~~~v----------~---------~~~~~~~ 59 (104)
T 2rb8_A 3 LDAPSQIEVKD--VTDTTALITWMPPSQPVDGFELTYGIKDVPGDRT--TIDL----------T---------EDENQYS 59 (104)
T ss_dssp CCCCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCE--EEEE----------E---------TTCCEEE
T ss_pred CCCCCccEEEE--ecCCeEEEEEcCCCCccceEEEEEEECcCCCceE--EEEc----------C---------CCcCEEE
Confidence 55676666654 3468999999865432 1267776432111100 0000 0 1113578
Q ss_pred ecCCCCCcEEEEEEccC-CCccc--eeeEEECCCCC
Q 006591 291 MTGLQPSSTVSYRYGSE-AVDWS--DKIQFRTPPAG 323 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~-~~~~S--~~~~F~T~P~~ 323 (639)
|+||+|||+|.++|..- +.+.| ....|+|.+..
T Consensus 60 l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~~ 95 (104)
T 2rb8_A 60 IGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLAA 95 (104)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC--
T ss_pred eCCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCCc
Confidence 99999999999999642 22222 34568887654
No 70
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=95.76 E-value=0.021 Score=62.57 Aligned_cols=71 Identities=17% Similarity=0.161 Sum_probs=45.4
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCC-CcEEEEcCCccccCCcHHHHHHHHHhhhh--hhcCC
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGN-VDSVFHIGDISYATGFLVEWDFFLHQITP--VASRV 402 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~-pDfVl~~GDl~y~~g~~~~wd~f~~~l~~--l~~~v 402 (639)
...+++++||+|.. ...+.++++.+.... .|.++++||+++.+....+ .+..+.. +....
T Consensus 211 ~~~~~~vigDiHG~--------------~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~e---~~~~l~~l~~~~~~ 273 (477)
T 1wao_1 211 ETEKITVCGDTHGQ--------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVE---VILTLFGFKLLYPD 273 (477)
T ss_dssp SSCEEEEECBCTTC--------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHH---HHHHHHHHHHHSTT
T ss_pred CCcceEEEeCCCCC--------------HHHHHHHHHHcCCCCCcCeEEEeccccCCCcchHH---HHHHHHHHHhhCCC
Confidence 35799999999942 345666766654333 3569999999965433322 2222221 12245
Q ss_pred ceEEecCCCCc
Q 006591 403 SYMTAIGNHER 413 (639)
Q Consensus 403 P~~~v~GNHD~ 413 (639)
.++.+.||||.
T Consensus 274 ~~~~lrGNHE~ 284 (477)
T 1wao_1 274 HFHLLRGNHET 284 (477)
T ss_dssp TEEEECCTTSS
T ss_pred ceEeecCCccH
Confidence 78999999995
No 71
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=95.62 E-value=0.058 Score=47.20 Aligned_cols=87 Identities=20% Similarity=0.280 Sum_probs=50.1
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC-CC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK-EP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|...... .+.++++|+|..+.. .. -.|+|...+...+-..... | +...
T Consensus 9 P~pP~~~~~~---~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~~------------~---------~~~~ 64 (114)
T 2kbg_A 9 PSPPSIHGQP---SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKV------------Q---------GNKD 64 (114)
T ss_dssp CCSCCEECCB---CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEEE------------E---------TTTC
T ss_pred ccCCcccccc---cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEEc------------C---------CCcC
Confidence 5555433322 356899999986432 22 2788876533222111000 1 1112
Q ss_pred EEEecCCCCCcEEEEEEccC-CCccce--eeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-AVDWSD--KIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~~~~S~--~~~F~T~P~~ 323 (639)
.++|.||+|++.|.+||... ..|.|+ ...|+|.+..
T Consensus 65 ~~~l~~L~p~t~Y~frV~A~N~~G~s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 65 HIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKP 103 (114)
T ss_dssp CEEECCCCTTCCEEEEEEEECTTSCEEEEEEEECCCCCC
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCcCCcCCEEEcCCCC
Confidence 47899999999999999753 334443 4678886543
No 72
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.60 E-value=0.094 Score=44.39 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=27.4
Q ss_pred EEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~ 322 (639)
..++++|+|++.|.|||..-+ . .+|....++|.+.
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCC
Confidence 568899999999999997533 2 3677788888764
No 73
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=95.59 E-value=0.11 Score=43.25 Aligned_cols=84 Identities=15% Similarity=0.179 Sum_probs=48.4
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
..|..+.+.... .+++.|+|...... .-.|+|.............. + +....++|
T Consensus 3 ~~P~~l~v~~~~--~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~~~------------~---------~~~~~~~i 59 (98)
T 3teu_A 3 DAPTDLQVTNVT--DTSITVSWTPPSATITGYRITYTPSNGPGEPKELTV------------P---------PSSTSVTI 59 (98)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEEEE------------C---------TTCSEEEE
T ss_pred CCCCceEEEEec--CCEEEEEEeCCCCcccEEEEEEEECCCCCceEEEEc------------C---------CCcCEEEe
Confidence 356666655433 47899999976432 23677874322111111110 0 11135789
Q ss_pred cCCCCCcEEEEEEccC-CCccceeeEEECC
Q 006591 292 TGLQPSSTVSYRYGSE-AVDWSDKIQFRTP 320 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~~-~~~~S~~~~F~T~ 320 (639)
+||+|+|.|.++|..- ..+.|+..++...
T Consensus 60 ~~L~p~t~Y~~~V~A~n~~G~s~p~~~~~~ 89 (98)
T 3teu_A 60 TGLTPGVEYVVSVYALKDNQESPPLVGTQT 89 (98)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCCEEEEEE
T ss_pred cCCCCCCEEEEEEEEEeCCCCCCCeEEEec
Confidence 9999999999999752 3356665555543
No 74
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.56 E-value=0.069 Score=45.63 Aligned_cols=84 Identities=17% Similarity=0.188 Sum_probs=52.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.... .+++.|+|...... .-.|+|...+..... ... ....
T Consensus 18 P~~P~~l~~~~~~--~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~---~~~---------------------~~~~ 71 (116)
T 1x5g_A 18 PGPAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQ---DVD---------------------VSSH 71 (116)
T ss_dssp CCCCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCC---CEE---------------------ECSS
T ss_pred CcCCCccEEEecC--CCEEEEEEeCCCCCCCcccEEEEEEEECCCCccE---EEe---------------------cCCc
Confidence 5567666666543 47999999865321 126677644322110 000 0113
Q ss_pred EEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
..+|+||+|+|.|.+||..- ...+|....|+|.+.
T Consensus 72 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 72 SYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 57899999999999999652 124788888999764
No 75
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.55 E-value=0.064 Score=45.61 Aligned_cols=87 Identities=23% Similarity=0.313 Sum_probs=51.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCC--CC----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGD--KE----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~--~~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+.. ....+++.|.|.... .. .-.|+|...+...+... +. +..
T Consensus 9 P~~P~~~~~~~-~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~---------------------~~~ 64 (110)
T 2crz_A 9 PGPCLPPRLQG-RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV--YQ---------------------GSE 64 (110)
T ss_dssp CCCCCCCEECS-CCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEE--EE---------------------ESC
T ss_pred CCCCCCceecc-ccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEE--Ee---------------------CCc
Confidence 55666666632 123579999996432 21 13677764332212111 00 011
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
...++++|+|++.|.+||..-+ ..||....++|.+.+
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 65 VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp SEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 2567899999999999997522 247888889887643
No 76
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.55 E-value=0.13 Score=43.17 Aligned_cols=84 Identities=15% Similarity=0.076 Sum_probs=52.2
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.... .+++.|+|...... .-.|+|...+..... .... . ..
T Consensus 8 P~~P~~l~~~~~~--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~---~~~~----------~-----------~~ 61 (106)
T 2ed8_A 8 PGPVENLQAVSTS--PTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQ---NIEV----------D-----------GL 61 (106)
T ss_dssp CCCCEEEEEECSS--TTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEE---EEEE----------C-----------SS
T ss_pred CcCCceeEEEecC--CCEEEEEECCCCCCCCCeeEEEEEEEECCCCceE---EEeC----------C-----------cc
Confidence 5677777666543 57999999965321 126777644322110 0000 0 02
Q ss_pred EEEecCCCCCcEEEEEEccCCC----ccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEAV----DWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~~----~~S~~~~F~T~P~ 322 (639)
.++|++|+|+|.|.+||..-+. .+|....|+|.+.
T Consensus 62 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 62 SYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp CEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 4689999999999999975321 3677888998654
No 77
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.53 E-value=0.14 Score=43.72 Aligned_cols=87 Identities=15% Similarity=0.095 Sum_probs=53.3
Q ss_pred cCCCCCceeEEeeccCCCCceEEEEEeCCC--------CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccC
Q 006591 211 ANPKKPLYGHLSSVDSTGTSMRLTWVSGDK--------EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHN 282 (639)
Q Consensus 211 ~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~--------~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~ 282 (639)
.-|..|..+++.......+++.|+|..... ..-.|+|...+........ +.
T Consensus 6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~--------------~~------- 64 (109)
T 1uc6_A 6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVE--------------LS------- 64 (109)
T ss_dssp CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEE--------------ES-------
T ss_pred EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEe--------------cc-------
Confidence 346778777777644345799999996542 1247888755432111000 00
Q ss_pred CceEEEEEecCCCCCcEEEEEEccCC---C---ccceeeEEECC
Q 006591 283 PGYIHTAVMTGLQPSSTVSYRYGSEA---V---DWSDKIQFRTP 320 (639)
Q Consensus 283 ~g~~h~a~l~gL~P~t~Y~Yrvg~~~---~---~~S~~~~F~T~ 320 (639)
....+.|.+|+|||.|..||.... . .||....++|.
T Consensus 65 --~~~~~~l~~L~p~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~~ 106 (109)
T 1uc6_A 65 --NGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATPW 106 (109)
T ss_dssp --SCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECCC
T ss_pred --cCCEEEEeCCCCCCEEEEEEEEEeCCCCCcCcCCCCeeeeec
Confidence 012568899999999999998642 1 36666666653
No 78
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.50 E-value=0.074 Score=46.50 Aligned_cols=88 Identities=23% Similarity=0.266 Sum_probs=52.8
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.... .+++.|+|....... -.|+|...+.... .+..... .+...
T Consensus 28 P~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~----~~~~~~~----------------~~~~~ 85 (130)
T 1wfo_A 28 PGPPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTAN----TATVEVL----------------APSAR 85 (130)
T ss_dssp CCCCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCS----CCCEEEE----------------CTTCC
T ss_pred CCCCCceEEEecC--CCEEEEEEcCCCCCCCceEEEEEEEEECCCCCc----eEEEEEe----------------CCCce
Confidence 5567666666543 479999998653321 2666664332110 0000000 11224
Q ss_pred EEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~ 322 (639)
..+|++|+|+|.|.+||..-+ . .+|....|+|.+.
T Consensus 86 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 86 QYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 678999999999999997532 2 3677788998754
No 79
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=95.46 E-value=0.15 Score=56.75 Aligned_cols=122 Identities=15% Similarity=0.151 Sum_probs=64.9
Q ss_pred EEEEEEeeeccc--eEEEEeecC---Cccceeeeccccccc-cCCCCCceeEEeeccCCCCceEEEEEeCCCC-----Cc
Q 006591 175 SIIFHVINIRTD--IEFVFFAGG---FATPCILSRTQPVNF-ANPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQ 243 (639)
Q Consensus 175 ~~~~~l~n~r~~--~~f~~f~~g---~~~~~~~a~s~~v~~-~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~ 243 (639)
..++.|-+++.. |.|.+.+.. ...| -..+..+.+ ..+..|..+.+.. ...++++|+|...... .-
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sp--s~~s~~v~v~T~~~~Ps~~~~~~--~s~tSV~LsW~pP~~~ng~I~~Y 474 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVT--SRSFRTASVSINQTEPPKVRLEG--RSTTSLSVSWSIPPPQQSRVWKY 474 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCS--CCCEEEEEEECCSCCCCEEEEEE--CCC-CCEEEEECCTTTTTTCSEE
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCC--CCccceeEEeecccCCCCCceee--ccCCeEEEEEECCcCCCCcccEE
Confidence 334555565544 677665532 1111 011122222 2345566665532 3468999999965322 12
Q ss_pred EEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEccCC----CccceeeEEEC
Q 006591 244 QVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRT 319 (639)
Q Consensus 244 ~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T 319 (639)
.|+|...+.. . ...... +....++|+||+|+|.|.++|..-+ ..||+...|+|
T Consensus 475 ~V~y~~~~~~-~-~~~~v~---------------------~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T 531 (536)
T 3fl7_A 475 EVTYRKKGDS-N-SYNVRR---------------------TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQT 531 (536)
T ss_dssp EEEEEEC--C-C-CCEEEE---------------------ESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEEC
T ss_pred EEEEEECCCC-c-eEEEEc---------------------CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEe
Confidence 6777744322 0 000000 0112578999999999999997522 24888999999
Q ss_pred CCCC
Q 006591 320 PPAG 323 (639)
Q Consensus 320 ~P~~ 323 (639)
.+..
T Consensus 532 ~~~~ 535 (536)
T 3fl7_A 532 LSPE 535 (536)
T ss_dssp CC--
T ss_pred CCCC
Confidence 8754
No 80
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.46 E-value=0.092 Score=45.08 Aligned_cols=89 Identities=17% Similarity=0.210 Sum_probs=53.5
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC--C-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK--E-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~--~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
.|..+++... ..+++.|+|..... . .-.|+|...+..... .+.... ...++...
T Consensus 18 ~P~~~~~~~~--~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~---~~~~~~--------------~~~~~~~~ 78 (122)
T 1va9_A 18 PPMDVTLQPV--TSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNG---QYSIVE--------------MKATGDSE 78 (122)
T ss_dssp CCEEEEEEEC--SSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCC---SCBCCB--------------CCCCSSEE
T ss_pred CCcceEEEec--cCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCc---ceEEEE--------------EecCCcee
Confidence 5666666543 35899999996543 1 126777644321110 000000 00123456
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
.++|+||+|+|.|.++|..-+ ..+|....|+|.+.
T Consensus 79 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 79 VYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 789999999999999997421 24788888988754
No 81
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=95.36 E-value=0.029 Score=61.58 Aligned_cols=72 Identities=15% Similarity=0.151 Sum_probs=44.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
.+++++||+|. ....+.++++.......+-++++||+++.+....+--.++..++. ...-.++.+
T Consensus 83 ~pI~VIGDIHG--------------q~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~-~~P~~v~lL 147 (521)
T 1aui_A 83 APVTVCGDIHG--------------QFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKI-LYPKTLFLL 147 (521)
T ss_dssp SSEEEECCCTT--------------CHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHH-HSTTTEEEC
T ss_pred cceeeccCCCC--------------CHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhh-hCCCeEEEe
Confidence 46999999994 245566666644344568899999999654433221122222211 123358999
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
.||||..
T Consensus 148 RGNHE~~ 154 (521)
T 1aui_A 148 RGNHECR 154 (521)
T ss_dssp CCTTSSH
T ss_pred cCCccHH
Confidence 9999963
No 82
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.34 E-value=0.1 Score=44.79 Aligned_cols=86 Identities=17% Similarity=0.340 Sum_probs=50.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-Cc----EEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-PQ----QVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~~----~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+.... .+++.|.|...... .. .|+|...+.. ..|.... . +...
T Consensus 18 P~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-----~~~~~~~-~----------------~~~~ 73 (118)
T 1x3d_A 18 PDIPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN-----GEFCQCY-M----------------GSQK 73 (118)
T ss_dssp CCCCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSS-----SCCEEEE-E----------------ESCS
T ss_pred CcCCCCcEEeccC--CCEEEEEECCCCCCCCcceEEEEEEecCCCC-----CCeEEee-c----------------cCCc
Confidence 5566666655443 47999999865432 22 4555532221 0111000 0 0012
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
..++++|+|++.|.|||..-+ ..+|....|+|.+.
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCC
Confidence 468899999999999996421 24777888888754
No 83
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.20 E-value=0.11 Score=45.75 Aligned_cols=94 Identities=14% Similarity=0.224 Sum_probs=51.8
Q ss_pred CCCCCc-eeEEeeccCCCCceEEEEEeCCCC--Cc-EEEEecCC-CcccceeeeeeccccccCCCCCCCCCCCccCC--c
Q 006591 212 NPKKPL-YGHLSSVDSTGTSMRLTWVSGDKE--PQ-QVEYGDDG-KTQTSEVSTFTQENMCSSALPSPAKDFGWHNP--G 284 (639)
Q Consensus 212 ~~~~P~-~~~l~~~~~~~~sm~v~W~T~~~~--~~-~V~yg~~g-~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~--g 284 (639)
.|..|. .+++... +.++++|.|...... .. .|+|.... ...... .+... ..|..- .
T Consensus 15 ~P~~P~~~~~~~~~--~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~--~~~~~-------------~~w~~~~~~ 77 (127)
T 2dmk_A 15 APNPPSIREELCTA--SHDTITVHWISDDEFSISSYELQYTIFTGQANFIS--LYNSV-------------DSWMIVPNI 77 (127)
T ss_dssp SCCCCEEEEEEEEE--ETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHH--HHHTG-------------GGSEEEEEE
T ss_pred CCcCCCCCCEEEee--eCCEEEEEECCCCCCCccceEEEEEEecccccccc--cccCC-------------CCcEEeecc
Confidence 477787 5555544 357999999976532 23 67776311 100000 00000 001100 0
Q ss_pred eEEEEEecCCCCCcEEEEEEccC---CCccceeeEEECCCC
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGSE---AVDWSDKIQFRTPPA 322 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~~---~~~~S~~~~F~T~P~ 322 (639)
.-...+++||+|+++|.|||..- +..+|....++|++.
T Consensus 78 ~~~~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 78 KQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp CSSEEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred cCCeEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 01145789999999999999642 224677788888753
No 84
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.20 E-value=0.072 Score=45.15 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=28.5
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
..+|+||+|+|.|.+||..-+ ..||....|+|.+..
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 568899999999999997522 247888999997653
No 85
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=95.13 E-value=0.22 Score=42.60 Aligned_cols=84 Identities=18% Similarity=0.204 Sum_probs=49.2
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..++..- .+.+++.|+|....... -.|+|...+. ..... . -.
T Consensus 7 ~Ps~v~~l~v~~--~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~-------~~~~~----------~---------~~ 58 (104)
T 2dle_A 7 GAIQVFDVTAVN--ISATSLTLIWKVSDNESSSNYTYKIHVAGETD-------SSNLN----------V---------SE 58 (104)
T ss_dssp SCCBEEEEEEEE--ECSSCEEEEEEESCSTTCCSCEEEEEEECSSC-------EEEEE----------E---------SS
T ss_pred CCCCCceEEEEE--eecCEEEEEEcCCCCCCCceEEEEEEEECCCC-------eEEEc----------C---------CC
Confidence 355565555544 34689999999653321 3566653211 00000 0 01
Q ss_pred EEEEecCCCCCcEEEEEEccCCC---ccceeeEEECCCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEAV---DWSDKIQFRTPPAG 323 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~~---~~S~~~~F~T~P~~ 323 (639)
..++|+||+|||.|.++|..... +-+....+.|.|.+
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~p 98 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVP 98 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCCS
T ss_pred CEEEECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCCC
Confidence 26899999999999999975321 22345667787654
No 86
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.07 E-value=0.091 Score=45.06 Aligned_cols=36 Identities=22% Similarity=0.148 Sum_probs=28.2
Q ss_pred EEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
..++|++|+|+|.|.+||..- ...+|....|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 357899999999999999642 124788889999754
No 87
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=95.04 E-value=0.076 Score=46.33 Aligned_cols=89 Identities=16% Similarity=0.267 Sum_probs=50.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC--CC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK--EP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+.... .+ +.|+|.-... .. -.|+|...+...+.. .+..... . +..
T Consensus 8 P~~P~~~~~~~~~--~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~--~~~~~~~-------~---------~~~ 66 (122)
T 2e3v_A 8 PSSPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS--KWYDAKE-------A---------SME 66 (122)
T ss_dssp CCCCEEEEEEECS--SC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEE--EEEEHHH-------H---------HTT
T ss_pred CcCCCccEEEecC--Cc-EEEEECCCCcCCCCcceEEEEEEEECCCCCccc--ceeeeee-------c---------Ccc
Confidence 5567666665533 34 9999995432 22 256676544322211 0000000 0 011
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
..++|++|+|+|+|.+||..-+ ..+|....|+|.|.
T Consensus 67 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 67 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp TEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 2578999999999999997522 24777888887664
No 88
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.01 E-value=0.043 Score=47.09 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=28.0
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
..+++||+|++.|.|||..-+ ..||+...|+|.+.+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 105 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGS 105 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCC
Confidence 367899999999999996522 247788889997654
No 89
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=94.95 E-value=0.16 Score=42.59 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=46.1
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+.+... +.+++.|+|.-.... .-.|+|...+......... .++-...++
T Consensus 2 p~~P~~l~~~~~--~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~~---------------------~~~~~t~~~ 58 (100)
T 3b83_A 2 LQPPFNIKVTNI--TLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTVD---------------------LTSSITSLT 58 (100)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEEE---------------------ECTTEEEEE
T ss_pred CccCCccEEEEe--cCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEEE---------------------ECCcceEEE
Confidence 456766666543 458999999865432 2367776433211100000 012234678
Q ss_pred ecCCCCCcEEEEEEccC-CCcccee
Q 006591 291 MTGLQPSSTVSYRYGSE-AVDWSDK 314 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~-~~~~S~~ 314 (639)
|+||+|+|+|.++|... ..++|+.
T Consensus 59 i~~L~p~t~Y~~~V~A~n~~g~s~p 83 (100)
T 3b83_A 59 LTNLEPNTTYEIRIVARNGQQYSPP 83 (100)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCC
T ss_pred ECCCCCCCEEEEEEEEEeCCCCCCC
Confidence 99999999999999753 2344443
No 90
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.92 E-value=0.039 Score=46.02 Aligned_cols=34 Identities=32% Similarity=0.363 Sum_probs=26.4
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
..+|+||+|+|.|.++|..-+ ..||....|+|.|
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 458899999999999996421 2477778888865
No 91
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=94.92 E-value=0.22 Score=41.73 Aligned_cols=68 Identities=25% Similarity=0.354 Sum_probs=39.9
Q ss_pred CceeEEeeccCCCCceEEEEEeCCCCC--cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecC
Q 006591 216 PLYGHLSSVDSTGTSMRLTWVSGDKEP--QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTG 293 (639)
Q Consensus 216 P~~~~l~~~~~~~~sm~v~W~T~~~~~--~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~g 293 (639)
|..+.+. .-+.++++|+|....... -.|+|...+.......... + +-.-.++|+|
T Consensus 5 P~~l~v~--~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~~------------~---------~~~t~~~l~g 61 (98)
T 3tes_A 5 PKNLVVS--EVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAINLTV------------P---------GSERSYDLTG 61 (98)
T ss_dssp CEEEEEE--SCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEEEEE------------E---------TTCSEEEECS
T ss_pred CCceEEE--ecCCCeEEEEecCCcCccceEEEEEEECCCCCceEEEEc------------C---------CCcCEEEECC
Confidence 4444443 445689999999655422 2677875432111000000 0 0112578999
Q ss_pred CCCCcEEEEEEcc
Q 006591 294 LQPSSTVSYRYGS 306 (639)
Q Consensus 294 L~P~t~Y~Yrvg~ 306 (639)
|+|+|.|.++|..
T Consensus 62 L~P~t~Y~~~V~A 74 (98)
T 3tes_A 62 LKPGTEYTVSIYG 74 (98)
T ss_dssp CCTTCEEEEEEEE
T ss_pred CCCCCEEEEEEEE
Confidence 9999999999875
No 92
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.87 E-value=0.21 Score=42.87 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=51.4
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC--C-CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK--E-PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~--~-~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|..+++.... .+++.|+|..... . .-.|+|...+..... ...... + +....++|
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~-~~~~~~----------~---------~~~~~~~i 78 (119)
T 2ee2_A 21 APTEVGVKVLS--SSEISVHWEHVLEKIVESYQIRYWAAHDKEEA-ANRVQV----------T---------SQEYSARL 78 (119)
T ss_dssp CCCSCEEEEEE--TTEEEEECCCCSCTTCCEEEEEEEESSSCGGG-CEEEEE----------E---------TTCSEEEE
T ss_pred CCCcEEEEEcc--CCEEEEEecCCCCCccceEEEEEEECCCcccC-cEEEEc----------C---------CCEeEEEE
Confidence 45455555433 4799999986543 1 226777643321110 000000 0 11136789
Q ss_pred cCCCCCcEEEEEEccC----CCccceeeEEECCCCC
Q 006591 292 TGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPAG 323 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~~ 323 (639)
+||+|+|.|.+||..- ...+|....|+|.+.+
T Consensus 79 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ee2_A 79 ENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAS 114 (119)
T ss_dssp CSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCC
T ss_pred CCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCC
Confidence 9999999999999652 2247888899997654
No 93
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=94.84 E-value=0.84 Score=42.97 Aligned_cols=69 Identities=17% Similarity=0.223 Sum_probs=41.7
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|..+.+.... .+++.|+|...... .-.|+|...+.......... + +-....+|
T Consensus 116 ~P~~l~~~~~~--~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~~i 172 (203)
T 2gee_A 116 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSI------------S---------PSDNAVVL 172 (203)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCCSEEEEEEEETTCGGGCEEEEE------------C---------TTCCEEEE
T ss_pred CCCceEEEEcC--CCEEEEEEcCCCCCCccEEEEEEEECCCCCccEEEEc------------C---------CCcCEEEE
Confidence 67666654433 47999999976432 23677775332211110000 0 11235789
Q ss_pred cCCCCCcEEEEEEcc
Q 006591 292 TGLQPSSTVSYRYGS 306 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~ 306 (639)
+||+|+|.|.++|..
T Consensus 173 ~~L~p~t~Y~~~V~A 187 (203)
T 2gee_A 173 TNLLPGTEYVVSVSS 187 (203)
T ss_dssp CSCCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEEEEE
Confidence 999999999999975
No 94
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=94.81 E-value=0.47 Score=43.73 Aligned_cols=86 Identities=17% Similarity=0.102 Sum_probs=48.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+++.. ...+++.|.|.-.... .-.|+|...+.... ...... +.....+
T Consensus 95 p~~P~~l~~~~--~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~-~~~~~~---------------------~~~~~~~ 150 (186)
T 1qr4_A 95 VGSPKGISFSD--ITENSATVSWTPPRSRVDSYRVSYVPITGGTP-NVVTVD---------------------GSKTRTK 150 (186)
T ss_dssp CCCCSCEEEES--CCSSCEEEEECCCSSCCSEEEEEEEETTCCCC-EEEEEE---------------------TTCCEEE
T ss_pred CCCCCccEEEE--eCCCEEEEEEECCCCcccEEEEEEEeCCCCCc-eEEEcC---------------------CCcCEEE
Confidence 56776665543 3458999999864332 23677764432111 100100 1113578
Q ss_pred ecCCCCCcEEEEEEccC-CCccc--eeeEEECCCC
Q 006591 291 MTGLQPSSTVSYRYGSE-AVDWS--DKIQFRTPPA 322 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~-~~~~S--~~~~F~T~P~ 322 (639)
|+||+|++.|.++|... +.+.| ....|+|.|.
T Consensus 151 i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 151 LVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp ECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred EcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 99999999999999752 22334 3456778764
No 95
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.78 E-value=0.3 Score=40.75 Aligned_cols=83 Identities=19% Similarity=0.349 Sum_probs=47.6
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|. ..+... ..+++.|.|....... -.|+|...+...+... .. + +...
T Consensus 8 P~~p~-~~v~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-~~------------~---------~~~~ 62 (107)
T 2dn7_A 8 PGRPT-MMISTT--AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-DF------------G---------KDDQ 62 (107)
T ss_dssp CCCCE-EEEEEC--STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-EE------------E---------TTCC
T ss_pred CCCCc-EeEEec--CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEE-Ee------------C---------CCcc
Confidence 45565 455544 4689999999653221 2677764432211100 00 0 1113
Q ss_pred EEEecCCCCCcEEEEEEccC-CCc---cceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-AVD---WSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~~~---~S~~~~F~T~P 321 (639)
..+|++|+|+|.|.+||..- ..+ +|. ..|+|.+
T Consensus 63 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 63 HFTVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCC
Confidence 57899999999999999752 223 444 4577754
No 96
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.64 E-value=0.23 Score=43.30 Aligned_cols=36 Identities=14% Similarity=0.041 Sum_probs=27.8
Q ss_pred EEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
..++|+||+|+|.|.+||..- ...+|....|+|.+.
T Consensus 79 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 79 SSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp SEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 467899999999999999642 124788888998654
No 97
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=94.63 E-value=0.2 Score=47.66 Aligned_cols=89 Identities=15% Similarity=0.200 Sum_probs=53.5
Q ss_pred CCCCCceeEEeeccC----CCCceEEEEEeCCC--C---CcEEEEe-cCCCcccceeeeeeccccccCCCCCCCCCCCcc
Q 006591 212 NPKKPLYGHLSSVDS----TGTSMRLTWVSGDK--E---PQQVEYG-DDGKTQTSEVSTFTQENMCSSALPSPAKDFGWH 281 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~----~~~sm~v~W~T~~~--~---~~~V~yg-~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~ 281 (639)
.|..|..+.+....+ ..+++.|+|..... . .-.|+|. ..+...+......
T Consensus 108 ~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~-------------------- 167 (215)
T 1cd9_B 108 KLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHL-------------------- 167 (215)
T ss_dssp CCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEE--------------------
T ss_pred EeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEecc--------------------
Confidence 466787665554311 35789999986532 1 2367776 4433222111000
Q ss_pred CCceEEEEEecCCCCCcEEEEEEccC---CC----ccceeeEEECCC
Q 006591 282 NPGYIHTAVMTGLQPSSTVSYRYGSE---AV----DWSDKIQFRTPP 321 (639)
Q Consensus 282 ~~g~~h~a~l~gL~P~t~Y~Yrvg~~---~~----~~S~~~~F~T~P 321 (639)
.+......|.+|+|+|+|..||... +. .||....|+|+.
T Consensus 168 -~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 -PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp -ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred -cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 0123467899999999999999752 11 378888999864
No 98
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.53 E-value=0.2 Score=42.25 Aligned_cols=88 Identities=20% Similarity=0.248 Sum_probs=49.2
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
+..|..+++.-.. .+++.|+|.-..... -.|+|...+.......... . -++. .++|
T Consensus 9 ~~~P~~l~~~~~~--~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~~~---------------~----~~~~--~~~l 65 (104)
T 2dkm_A 9 LPPPRALTLAAVT--PRTVHLTWQPSAGATHYLVRCSPASPKGEEEEREV---------------Q----VGRP--EVLL 65 (104)
T ss_dssp CCCCCCCEEEEEC--SSEEEEECCCCSSCSEEEEEEEESSSCCSSCCEEE---------------E----ESSS--EEEE
T ss_pred CCCCceeEEEecC--CCEEEEEEeCCCCCCeEEEEEEECCCCCCcceEEE---------------e----cCCC--EEEE
Confidence 4467666666543 589999997543322 2566653322110000000 0 0112 6899
Q ss_pred cCCCCCcEEEEEEccC-CCccce--eeEEECCCCC
Q 006591 292 TGLQPSSTVSYRYGSE-AVDWSD--KIQFRTPPAG 323 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~~-~~~~S~--~~~F~T~P~~ 323 (639)
+||+|+|+|.++|..- +.+.|. ...++|.|.+
T Consensus 66 ~~L~p~t~Y~~~V~A~~~~~~s~p~~~~~~T~p~~ 100 (104)
T 2dkm_A 66 DGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSG 100 (104)
T ss_dssp ESCCTTCCEEEEEEEECSSSBCCCEEEECCCCCCS
T ss_pred CCCCCCCEEEEEEEEECCCCCCCCEEEEEEcCCCC
Confidence 9999999999999753 233343 3456676543
No 99
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=94.47 E-value=0.18 Score=51.23 Aligned_cols=89 Identities=16% Similarity=0.299 Sum_probs=53.1
Q ss_pred CCCCceeEEeeccC----CCCceEEEEEeCCC--C---CcEEEEe-cCCCcccceeeeeeccccccCCCCCCCCCCCccC
Q 006591 213 PKKPLYGHLSSVDS----TGTSMRLTWVSGDK--E---PQQVEYG-DDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHN 282 (639)
Q Consensus 213 ~~~P~~~~l~~~~~----~~~sm~v~W~T~~~--~---~~~V~yg-~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~ 282 (639)
|..|..+++....+ ..+++.|+|..... . .-.|+|. ..+...+......
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~--------------------- 261 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPL--------------------- 261 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEE---------------------
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcccc---------------------
Confidence 66776555444321 35799999996432 1 2367777 4433222111000
Q ss_pred CceEEEEEecCCCCCcEEEEEEccC---CC----ccceeeEEECCCC
Q 006591 283 PGYIHTAVMTGLQPSSTVSYRYGSE---AV----DWSDKIQFRTPPA 322 (639)
Q Consensus 283 ~g~~h~a~l~gL~P~t~Y~Yrvg~~---~~----~~S~~~~F~T~P~ 322 (639)
++..+...|.+|+|+|+|..||... +. .||....|+|+..
T Consensus 262 ~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 262 PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 1123567899999999999999742 12 3778888998753
No 100
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.47 E-value=0.4 Score=41.05 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=49.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+++.. .+.+++.|+|.-.... .-.|+|...+... ..... + +-...+
T Consensus 7 ~p~~P~~l~~~~--~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~----~~~~v----------~---------~~~t~~ 61 (115)
T 2cuh_A 7 GPDGPTQLRALN--LTEGFAVLHWKPPQNPVDTYDIQVTAPGAPP----LQAET----------P---------GSAVDY 61 (115)
T ss_dssp CCSSCEEEECCC--CSSSCEEEEEECCSSCCSEEEEEEECSSSCC----EEEEE----------E---------TTCSEE
T ss_pred CCCCCcceEEEe--ccCCeEEEEEECCCCCccEEEEEEEcCCCCc----EEEEE----------C---------CCccEE
Confidence 356776555443 3468999999864332 2367776432211 01100 0 111267
Q ss_pred EecCCCCCcEEEEEEccCC-Cc--cceeeEEECCCC
Q 006591 290 VMTGLQPSSTVSYRYGSEA-VD--WSDKIQFRTPPA 322 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~-~~--~S~~~~F~T~P~ 322 (639)
+|+||+|+|+|.++|..-+ .+ -.....|+|.+.
T Consensus 62 ~l~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 62 PLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp EECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCC
T ss_pred EEeCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCC
Confidence 8999999999999996521 12 223466888754
No 101
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=94.46 E-value=0.12 Score=49.05 Aligned_cols=92 Identities=16% Similarity=0.294 Sum_probs=53.6
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+++.......+++.|+|...... .-.|+|...+...+... ...+. .+..
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~---~~~~~----------------~~~~ 163 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQI---PPEDT----------------ASTR 163 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEEC---CGGGG----------------CSCC
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEe---ccccc----------------cCcc
Confidence 366777777665433458999999954321 13677765432211100 00000 0112
Q ss_pred EEEEecCCCCCcEEEEEEccC---C-C---ccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE---A-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~---~-~---~~S~~~~F~T~P~ 322 (639)
...+|++|+|+|.|.+||... + . .||....|+|.+.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 164 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp SEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred ceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 357899999999999999752 1 1 2677788888653
No 102
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=94.45 E-value=0.64 Score=43.74 Aligned_cols=125 Identities=14% Similarity=0.142 Sum_probs=65.5
Q ss_pred eeEEEEEEeeeccc--eEEEEeec---CCccce---e-eeccccccccCCCCCceeEEeeccCCCCceEEEEEeCC--C-
Q 006591 173 GGSIIFHVINIRTD--IEFVFFAG---GFATPC---I-LSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGD--K- 240 (639)
Q Consensus 173 ~g~~~~~l~n~r~~--~~f~~f~~---g~~~~~---~-~a~s~~v~~~~~~~P~~~~l~~~~~~~~sm~v~W~T~~--~- 240 (639)
.....+.+-+++.. |.|.+.+. |...+. . +.......-..+..|..+... ....+++.|+|.... .
T Consensus 67 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~--~~~~~sv~l~W~~p~~~~~ 144 (214)
T 2ibg_A 67 GKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIE--EYSETAVVLHWSLASDADE 144 (214)
T ss_dssp EEEEEEEECSCCTTCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCB--CCSSSCEEEEEECCTTCCG
T ss_pred CcceeEEecCCcCCCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEE--EccCCeEEEEEeCCCccCC
Confidence 34566777777755 67766553 321111 1 000011111123345444333 334579999999753 1
Q ss_pred --C-CcEEEEecCCC-cccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEccCC----Cccc
Q 006591 241 --E-PQQVEYGDDGK-TQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEA----VDWS 312 (639)
Q Consensus 241 --~-~~~V~yg~~g~-~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~~----~~~S 312 (639)
. .-.|+|...+. ..+... .. . + ......+|+||+|++.|.|||..-+ ..+|
T Consensus 145 ~~i~~Y~v~~~~~~~~~~~~~~-~~--~---------~---------~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 203 (214)
T 2ibg_A 145 HLITGYYAYYRPSSSAGEYFKA-TI--E---------G---------AHARSFKIAPLETATMYEFKLQSFSAASASEFS 203 (214)
T ss_dssp GGCCEEEEEEEETTCCSCCEEE-EE--E---------C---------TTCCEEEECSCCTTCEEEEEEEEECSSCBCCCC
T ss_pred CCcceEEEEEEECCCCcceEEe-ec--c---------C---------CcceEEEeCCCCCCCEEEEEEEEEcCCccCCCc
Confidence 1 12677764433 111110 00 0 0 0112468899999999999997521 2477
Q ss_pred eeeEEECC
Q 006591 313 DKIQFRTP 320 (639)
Q Consensus 313 ~~~~F~T~ 320 (639)
....++|.
T Consensus 204 ~~~~~~T~ 211 (214)
T 2ibg_A 204 ALKQGRTQ 211 (214)
T ss_dssp CCEEEECC
T ss_pred ceEeeEec
Confidence 88888885
No 103
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=94.41 E-value=0.092 Score=53.02 Aligned_cols=91 Identities=16% Similarity=0.307 Sum_probs=55.4
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+++.......+++.|+|...... .-.|+|...+...+... ...+. ++..
T Consensus 199 ~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~---~~~~~----------------~~~~ 259 (303)
T 1i1r_A 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQI---PPEDT----------------ASTR 259 (303)
T ss_dssp ECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEEC---CGGGG----------------CSCC
T ss_pred ecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEE---ccccC----------------CCce
Confidence 466787777765433568999999965431 12777875543222110 00000 0112
Q ss_pred EEEEecCCCCCcEEEEEEccC---C----CccceeeEEECCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE---A----VDWSDKIQFRTPP 321 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~---~----~~~S~~~~F~T~P 321 (639)
...+|++|+|+|.|.+||... + ..||+...|+|+.
T Consensus 260 ~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 260 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 357899999999999999752 1 1367888999964
No 104
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.38 E-value=0.16 Score=43.89 Aligned_cols=82 Identities=17% Similarity=0.214 Sum_probs=50.3
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC--CC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK--EP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~--~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
.|..+++.... .+++.|+|..... .. -.|+|...+..... .. . + +...
T Consensus 31 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~--~~-----~-------~---------~~~~ 85 (124)
T 2ed9_A 31 PPQNVSLEVVN--SRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEM--ET-----L-------E---------PNNL 85 (124)
T ss_dssp CCBSCCEEEEE--TTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCE--EE-----E-------C---------SSCS
T ss_pred CCeeeEEEEcC--CCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcce--EE-----e-------c---------CCcC
Confidence 46556655443 4799999986543 11 26677644322110 00 0 0 1123
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
..+|++|+|+|.|.++|..-+ ..||....|+|+.
T Consensus 86 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 86 WYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 578999999999999997421 2478888999864
No 105
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=94.33 E-value=3.1 Score=41.04 Aligned_cols=99 Identities=19% Similarity=0.216 Sum_probs=55.6
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC-C-CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK-E-PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~-~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.+..|..+.+... ..++++|.|..... . .-.|+|...+.... ..... + +.....
T Consensus 112 ~~~~P~~l~~~~~--~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~-~~~~~------------~---------~~~~~~ 167 (290)
T 3r8q_A 112 NVSPPRRARVTDA--TETTITISWRTKTETITGFQVDAVPANGQTP-IQRTI------------K---------PDVRSY 167 (290)
T ss_dssp CCCCCEEEEEEEE--CSSCEEEEEECCSCCCCEEEEEEEESSSCCC-EEEEE------------C---------TTCSEE
T ss_pred CCCCCceeEEEEc--CCCeEEEEEeCCCCcccEEEEEEEECCCCcc-eEEec------------C---------CCccEE
Confidence 3456766666643 35799999997543 2 23677764332111 00000 0 011246
Q ss_pred EecCCCCCcEEEEEEccC-CCccce--eeEEECCCCCCCCceEEEEEec
Q 006591 290 VMTGLQPSSTVSYRYGSE-AVDWSD--KIQFRTPPAGGSDEMKFLAYGD 335 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~-~~~~S~--~~~F~T~P~~g~~~~~f~v~gD 335 (639)
+++||+|++.|.++|..- ..+.|. ...+.|.|.+ +..+++...++
T Consensus 168 ~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~-P~~l~~~~~~~ 215 (290)
T 3r8q_A 168 TITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDA-PSNLRFLATTP 215 (290)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC-CEEEEEEEEET
T ss_pred EECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCC-CCccEEEeeCC
Confidence 899999999999999642 223333 3456676543 23566655544
No 106
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.30 E-value=0.22 Score=42.85 Aligned_cols=85 Identities=20% Similarity=0.214 Sum_probs=49.0
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
..|..+++.- -+.+++.|+|...... .-.|+|...+....... . + + +-...+.|
T Consensus 9 ~pP~~l~~~~--vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~-~---------v---~---------~~~t~~~l 64 (108)
T 2ee3_A 9 APPRHLGFSD--VSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQT-E---------A---P---------GNATSAML 64 (108)
T ss_dssp CCSSCEEEES--CCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCE-E---------E---E---------TTCCEEEE
T ss_pred CCCceEEEEE--ccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEE-E---------c---C---------CCcCEEEc
Confidence 4566666654 3568999999854332 22777864322111000 0 0 1 11236789
Q ss_pred cCCCCCcEEEEEEcc-CCCccce--eeEEECCCC
Q 006591 292 TGLQPSSTVSYRYGS-EAVDWSD--KIQFRTPPA 322 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~-~~~~~S~--~~~F~T~P~ 322 (639)
+||+|+|.|..+|.. .+.+-|. ...|+|.+.
T Consensus 65 ~~L~p~T~Y~v~V~A~~~~g~s~p~~~~~~T~~v 98 (108)
T 2ee3_A 65 GPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKA 98 (108)
T ss_dssp CSCCSSCEEEEEEEEECTTSCEEEEEEEEECCCC
T ss_pred CCCCCCCEEEEEEEEEeCCCcCCCccCEEEeCCC
Confidence 999999999999864 2233332 235888643
No 107
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.24 E-value=0.22 Score=42.06 Aligned_cols=71 Identities=20% Similarity=0.247 Sum_probs=41.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC--CC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK--EP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+... ..++++|+|..... .. -.|+|...+...+ .. +.. .+ ...
T Consensus 8 P~~P~~l~~~~~--~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w------~~---~~~---~~---------~~~ 64 (110)
T 2yuw_A 8 TSPPTLLTVDSV--TDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDW------IV---ANK---DL---------IDK 64 (110)
T ss_dssp SCCCEEEEEEEE--CSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSE------EE---CCS---SC---------CCS
T ss_pred CCCCCccEEEec--cCCeEEEEECCCCCCCCCCccEEEEEEEECCCccc------eE---ecc---cc---------Ccc
Confidence 556766655543 35799999996432 22 2566664432211 11 100 01 111
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
...++++|+|++.|.|||..
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A 84 (110)
T 2yuw_A 65 TKFTITGLPTDAKIFVRVKA 84 (110)
T ss_dssp SEEEECSCCTTCEEEEEEEE
T ss_pred CEEEECCCCCCCEEEEEEEE
Confidence 25678999999999999975
No 108
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.19 E-value=0.14 Score=43.66 Aligned_cols=87 Identities=17% Similarity=0.223 Sum_probs=48.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC-C---C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK-E---P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~---~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+... ..+++.|.|..... . . -.|+|...+... .+..-.. .. ...
T Consensus 16 P~~P~~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~-----~~~~~~~-------~~---------~~~ 72 (117)
T 1uem_A 16 PGPPSKPQVTDV--TKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSN-----SWQTVAN-------HV---------KTT 72 (117)
T ss_dssp CBCCCCCEEEEE--CSSCEEEECCCCBCSSSCCCEEEEEEEETTTEE-----EEEEEEE-------EE---------CSS
T ss_pred ccCCCCCEEEEe--cCCEEEEEEeCCCCCCcCceEEEEEEEECCCCC-----ceeEccc-------cc---------CcC
Confidence 556766666543 35799999985532 1 1 366776432111 1111000 00 011
Q ss_pred EEEecCCCCCcEEEEEEccC-CCc---cceeeE-EECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-AVD---WSDKIQ-FRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~~~---~S~~~~-F~T~P~ 322 (639)
..++++|+|++.|.|||..- ..+ +|..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 46889999999999999753 222 444443 777654
No 109
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=94.18 E-value=0.28 Score=42.42 Aligned_cols=71 Identities=28% Similarity=0.492 Sum_probs=42.9
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+.+.-. +.+++.|+|...... .-.|+|...+...... .... + +....++
T Consensus 4 P~~P~~L~v~~~--t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~--~~~v----------~---------~~~ts~~ 60 (114)
T 3qwq_B 4 SDVPRDLEVVAA--TPTSLLISWDSGRGSYQYYRITYGETGGNSPVQ--EFTV----------P---------GPVHTAT 60 (114)
T ss_dssp -CCCEEEEEEEE--ETTEEEEEEECCSCCCSEEEEEEEESSCSSCCE--EEEE----------E---------TTCCEEE
T ss_pred CCCCCceEEEec--CCCEEEEEEcCCcCcccEEEEEEEECCCCCccE--EEEe----------C---------CCcCEEE
Confidence 567766666554 357999999975432 2377887543321001 1100 1 1123688
Q ss_pred ecCCCCCcEEEEEEcc
Q 006591 291 MTGLQPSSTVSYRYGS 306 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~ 306 (639)
|+||+|+|.|..+|..
T Consensus 61 l~gL~P~T~Y~v~V~A 76 (114)
T 3qwq_B 61 ISGLKPGVDYTITVYA 76 (114)
T ss_dssp ECSCCTTCEEEEEEEE
T ss_pred eCCCCCCCEEEEEEEE
Confidence 9999999999999864
No 110
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.16 E-value=0.13 Score=44.93 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=28.3
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
...+|++|+|+|.|.++|..-+ ..||....|+|.+.
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 77 LSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 4678999999999999987522 24788889999763
No 111
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=94.13 E-value=0.27 Score=50.77 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=26.6
Q ss_pred EEEEecCCCCCcEEEEEEccCC-Cc---cceeeEEECCCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA-VD---WSDKIQFRTPPAG 323 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~-~~---~S~~~~F~T~P~~ 323 (639)
...+|++|+|++.|.+||..-+ .| +|. ..|+|+|.+
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~-~~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTV-YEFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEE-EEEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCcee-eEecCCCCC
Confidence 3578999999999999997522 22 444 479998765
No 112
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.11 E-value=0.25 Score=43.37 Aligned_cols=36 Identities=19% Similarity=0.120 Sum_probs=28.5
Q ss_pred EEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
..++|+||+|+|.|..+|..- ...+|....|+|+..
T Consensus 75 ~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 75 RSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp CEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred CEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCC
Confidence 467999999999999999642 234788889999754
No 113
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.11 E-value=0.43 Score=41.37 Aligned_cols=36 Identities=17% Similarity=0.193 Sum_probs=28.7
Q ss_pred EEEecCCCCCcEEEEEEccC----CCccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~~ 323 (639)
.++|++|+|++.|.+||..- ...||....|+|++..
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 46789999999999999642 2248899999998653
No 114
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=94.08 E-value=0.41 Score=40.26 Aligned_cols=84 Identities=15% Similarity=0.254 Sum_probs=48.0
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC--C----C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK--E----P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~--~----~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
.|..+.+.... .+++.|+|..... . . -.|.|...+....+. +..... . +-..
T Consensus 7 ~P~~~~~~~~s--~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~---~~~~~v-------~---------~~~~ 65 (102)
T 3n1f_C 7 GPHIAYTEAVS--DTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSD---YKRDVV-------E---------GSKQ 65 (102)
T ss_dssp CCEEEEEEECS--SSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGG---CEEEEE-------E---------TTCS
T ss_pred CCceeEEEEcC--CCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCc---eEEEEE-------c---------CCce
Confidence 56666665543 4799999986532 1 1 278887544321010 000000 0 0012
Q ss_pred EEEecCCCCCcEEEEEEccC----CCccceeeEEEC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRT 319 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T 319 (639)
.++|++|+|+|.|..+|..- ....|....++|
T Consensus 66 ~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 66 WHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred EEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 46899999999999999642 123566777776
No 115
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.07 E-value=0.15 Score=43.57 Aligned_cols=72 Identities=21% Similarity=0.261 Sum_probs=42.1
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
.|..|..+++... ..+++.|+|....... -.|+|...+...+. ..... + +...
T Consensus 17 ~P~~P~~l~~~~~--~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~---~~~~~---------~---------~~~~ 73 (118)
T 2yrz_A 17 VPDTPTRLVFSAL--GPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELH---RLNIP---------N---------PAQT 73 (118)
T ss_dssp CCCCCCCCEECCC--BTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEE---EEEES---------C---------TTCC
T ss_pred CCCCCCceEEEeC--CCCEEEEEeCCCCCCCCccEEEEEEEECCCCceE---EEEcC---------C---------CCcC
Confidence 3566766665543 3579999998654432 25666543321111 00000 0 1113
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
.++|++|+|++.|.+||..
T Consensus 74 ~~~i~~L~p~t~Y~~~V~A 92 (118)
T 2yrz_A 74 SVVVEDLLPNHSYVFRVRA 92 (118)
T ss_dssp EEEEESCCTTCEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEE
Confidence 5788999999999999975
No 116
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=94.06 E-value=4.7 Score=39.39 Aligned_cols=102 Identities=19% Similarity=0.182 Sum_probs=57.3
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+++... ..++++|.|...... .-.|+|...+..... ..... . +.+-....
T Consensus 104 ~p~~P~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~-~~~~~------------~------~~~~~~~~ 162 (283)
T 1tdq_A 104 EIDAPKNLRVGSR--TATSLDLEWDNSEAEAQEYKVVYSTLAGEQYH-EVLVP------------K------GIGPTTKT 162 (283)
T ss_dssp CCCCCEEEEEEEE--CSSCEEEEEECCSSCCSEEEEEEEETTCCCCE-EEEEE------------C------CSSSEEEE
T ss_pred CCCCCCceEEEec--CCCeEEEEecCCCCCccEEEEEEEeCCCCcce-EEECC------------C------CCcccceE
Confidence 3567766666543 357999999975432 237777644322110 00000 0 00114577
Q ss_pred EecCCCCCcEEEEEEccC-CCcccee--eEEECCCCCCCCceEEEEEec
Q 006591 290 VMTGLQPSSTVSYRYGSE-AVDWSDK--IQFRTPPAGGSDEMKFLAYGD 335 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~-~~~~S~~--~~F~T~P~~g~~~~~f~v~gD 335 (639)
++++|+|++.|.++|..- +.+.|.. ..+.|.|.+ ...+++...++
T Consensus 163 ~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~~-P~~l~~~~~~~ 210 (283)
T 1tdq_A 163 TLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDS-PRDLMVTASSE 210 (283)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC-CEEEEEEEECS
T ss_pred EEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCCC-CCccEEeEecC
Confidence 899999999999999752 2234433 445565542 24466655544
No 117
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=93.91 E-value=0.33 Score=41.82 Aligned_cols=89 Identities=18% Similarity=0.240 Sum_probs=49.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC-C----CcEEEEecCC-CcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK-E----PQQVEYGDDG-KTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~----~~~V~yg~~g-~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+.+... ..++++|.|.-... . .-.|+|...+ ...+..... . + + +.
T Consensus 17 ~P~~P~~~~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~---~--~------~---------~~ 74 (121)
T 1x4z_A 17 PPEAPDRPTISTA--SETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS---A--I------P---------PS 74 (121)
T ss_dssp CCCCCCCCEEEEC--CSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE---E--E------C---------TT
T ss_pred CCccCCCCEEEEc--cCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeec---c--c------C---------CC
Confidence 4667776666543 35799999984322 1 1267777543 111211100 0 0 0 11
Q ss_pred EEEEEecCCCCCcEEEEEEccCC-C---ccceee-EEECCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEA-V---DWSDKI-QFRTPPA 322 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~-~F~T~P~ 322 (639)
....++++|+|++.|.|||..-+ . .+|... .+++.+.
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~ 116 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCSS
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCCC
Confidence 23578999999999999997532 2 244433 3555443
No 118
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=93.90 E-value=0.3 Score=46.02 Aligned_cols=90 Identities=14% Similarity=0.265 Sum_probs=52.7
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCC--CCC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGD--KEP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~--~~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+.+.... .+++|+|.... ... -.|+|...+...+... .+.... .+.
T Consensus 8 ~P~~P~~~~~~~~~---~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~-~~~~~~-----------------~~~ 66 (209)
T 2vkw_A 8 TPSSPSIDQVEPYS---STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK-WYDAKE-----------------ASM 66 (209)
T ss_dssp CCCCCEEEEEEECS---SCEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEE-EEEHHH-----------------HHH
T ss_pred CCcCCcccEeeecc---CeEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEe-EeeccC-----------------CCc
Confidence 36678777766543 25899999653 111 2677775443222111 110000 011
Q ss_pred EEEEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
....++++|+|+|.|.|||..-+ ..+|....|+|.+.
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 67 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp HSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred cceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 23578999999999999996421 23677778998764
No 119
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=93.89 E-value=0.27 Score=47.61 Aligned_cols=89 Identities=17% Similarity=0.284 Sum_probs=55.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
+..|.-+++...+ .+++.|+|...... .-.|+|...+. .+........ ...
T Consensus 106 ~~pP~~l~~~~~~--~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~~~~~~~-------------------~~~ 163 (214)
T 2b5i_B 106 LMAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGH-TWEEAPLLTL-------------------KQK 163 (214)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTTSCCEEE-------------------CSC
T ss_pred CCCCceEEEEEec--CCeEEEEECCCCccccCCCceEEEEEEecCCC-Chheeeeeee-------------------ccc
Confidence 4677777777644 36899999976532 23677765432 1111000000 011
Q ss_pred EEEEEecCCCCCcEEEEEEccC---C-----CccceeeEEECCCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSE---A-----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~---~-----~~~S~~~~F~T~P~~ 323 (639)
.+.+.|.+|+|||+|..||... + ..||....|+|.|..
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 2467889999999999999753 1 258888999998753
No 120
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.86 E-value=0.2 Score=45.30 Aligned_cols=36 Identities=17% Similarity=0.151 Sum_probs=28.8
Q ss_pred EEEecCCCCCcEEEEEEccC-C---CccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-A---VDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~---~~~S~~~~F~T~P~~ 323 (639)
.++|+||+|+|.|..||..- + ..+|....|+|++..
T Consensus 83 s~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~ 122 (137)
T 1wk0_A 83 NITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp EEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCC
Confidence 68899999999999999642 1 247888899998653
No 121
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.86 E-value=0.42 Score=41.47 Aligned_cols=91 Identities=18% Similarity=0.134 Sum_probs=50.7
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecC---CCcccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDD---GKTQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~---g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
-|..|..+.+... ..++++|.|.-.... .-.|+|... +...+...... .. +
T Consensus 17 ~P~~P~~l~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~---~~----------------~ 75 (124)
T 1wis_A 17 LPGPPTNLGISNI--GPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL---SN----------------E 75 (124)
T ss_dssp CCCCCEEEEEESC--CSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE---ES----------------C
T ss_pred CCccCCCCEEEEe--cCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE---cc----------------C
Confidence 4667766665543 458999999754321 136777642 11111111000 00 0
Q ss_pred ceEEEEEecCCCCCcEEEEEEccCC-Cc---ccee-eEEECCCCC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSEA-VD---WSDK-IQFRTPPAG 323 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~~-~~---~S~~-~~F~T~P~~ 323 (639)
+....+++++|+|++.|.+||..-+ .| +|.. ..++|.+..
T Consensus 76 ~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 76 PDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp TTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred CCceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 1123578999999999999987532 23 4443 458886543
No 122
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.81 E-value=0.2 Score=42.92 Aligned_cols=35 Identities=20% Similarity=0.441 Sum_probs=24.6
Q ss_pred EEEecCCCCCcEEEEEEccC-CCc---cceee-EEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-AVD---WSDKI-QFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~~~---~S~~~-~F~T~P~ 322 (639)
..+++||+|++.|.|||..- ..+ +|... .++|++.
T Consensus 77 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 77 SVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 57899999999999999752 223 44443 4677654
No 123
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=93.79 E-value=0.25 Score=41.88 Aligned_cols=72 Identities=19% Similarity=0.265 Sum_probs=42.4
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC--CC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK--EP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+.+... ..++++|+|.-... .. -.|+|...+...+ .. |.. .+. .
T Consensus 8 ~P~~P~~l~~~~~--~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w------~~---~~~---~~~---------~ 64 (111)
T 1x5y_A 8 PTSAPQHLTVEDV--TDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEW------VP---ANK---EPV---------E 64 (111)
T ss_dssp CCCCCEEEEEEEE--CSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCC------EE---SSS---SCB---------S
T ss_pred CCcCCCCCEEEec--cCCEEEEEECCCCcCCCCcccEEEEEEEECCCCce------EE---ccc---cCC---------c
Confidence 3567766666543 35799999995432 11 2667764433211 10 110 011 1
Q ss_pred EEEEEecCCCCCcEEEEEEcc
Q 006591 286 IHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
....++++|+|++.|.|||..
T Consensus 65 ~~~~~v~~L~p~t~Y~frV~A 85 (111)
T 1x5y_A 65 RCGFTVKDLPTGARILFRVVG 85 (111)
T ss_dssp SSEEEEECCCTTCCEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEE
Confidence 235678999999999999975
No 124
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.70 E-value=0.11 Score=44.71 Aligned_cols=35 Identities=17% Similarity=0.200 Sum_probs=26.5
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
..++++|+|++.|.|||..-+ ..||....++|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAV 114 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence 468899999999999997532 24677777888654
No 125
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.70 E-value=0.9 Score=38.21 Aligned_cols=84 Identities=21% Similarity=0.232 Sum_probs=49.2
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+++... +.+++.|+|.-.... .-.|+|...+.. . ..... + +-...++
T Consensus 8 p~~P~~l~v~~~--~~~sv~lsW~~p~~~i~~Y~i~y~~~~~~-~---~~~~~----------~---------~~~ts~~ 62 (105)
T 2cum_A 8 LEAPRDLEAKEV--TPRTALLTWTEPPVRPAGYLLSFHTPGGQ-T---QEILL----------P---------GGITSHQ 62 (105)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEECTTSC-E---EEEEE----------C---------SSCSEEE
T ss_pred CCCCCceEEEec--cCCEEEEEEcCCCCccceEEEEEEeCCCc-e---EEEEE----------C---------CCccEEE
Confidence 566766655543 468999999854432 126777643221 1 01100 0 1113678
Q ss_pred ecCCCCCcEEEEEEccC-CCccc--eeeEEECCC
Q 006591 291 MTGLQPSSTVSYRYGSE-AVDWS--DKIQFRTPP 321 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~-~~~~S--~~~~F~T~P 321 (639)
|+||+|+|.|.++|..- +.+.| ....|+|..
T Consensus 63 l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 63 LLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp ECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCC
T ss_pred ECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCC
Confidence 99999999999999652 22223 446788854
No 126
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=93.64 E-value=0.51 Score=44.67 Aligned_cols=87 Identities=13% Similarity=0.211 Sum_probs=54.2
Q ss_pred CCCCCceeEEeecc--CCCCceEEEEEeCCCC---------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCc
Q 006591 212 NPKKPLYGHLSSVD--STGTSMRLTWVSGDKE---------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGW 280 (639)
Q Consensus 212 ~~~~P~~~~l~~~~--~~~~sm~v~W~T~~~~---------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~ 280 (639)
.|..|..+.+.... ...+++.|+|...... .-.|+|...+...+... . .
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~--~-----~------------- 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIH--F-----A------------- 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEE--E-----E-------------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEE--e-----c-------------
Confidence 36678777776543 2357999999965432 12667764433221100 0 0
Q ss_pred cCCceEEEEEecCCCCCcEEEEEEccC---C--CccceeeEEECCC
Q 006591 281 HNPGYIHTAVMTGLQPSSTVSYRYGSE---A--VDWSDKIQFRTPP 321 (639)
Q Consensus 281 ~~~g~~h~a~l~gL~P~t~Y~Yrvg~~---~--~~~S~~~~F~T~P 321 (639)
+......|.+|+|+|.|..||... + ..||+...|+|+.
T Consensus 162 ---~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 ---GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp ---ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred ---cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 011256899999999999999742 1 2478889999964
No 127
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=93.51 E-value=0.5 Score=41.29 Aligned_cols=72 Identities=22% Similarity=0.343 Sum_probs=43.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+++... +.+++.|+|.-.... .-.|+|...+.......... + +-...++
T Consensus 29 ~~~P~~l~v~~~--t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~~~~v------------~---------~~~t~~~ 85 (121)
T 2ocf_D 29 SDVPTKLEVVAA--TPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTV------------P---------GSKSTAT 85 (121)
T ss_dssp CCSCEEEEEEEE--CSSCEEEEEECCSSCCCEEEEEEEETTTCSCBEEEEE------------E---------TTCCEEE
T ss_pred CCCCCccEEEec--CCCEEEEEEcCCCCCCcEEEEEEEECCCCCccEEEEe------------C---------CCcCEEE
Confidence 456776666654 357999999865432 23677764432110000000 0 1123678
Q ss_pred ecCCCCCcEEEEEEccC
Q 006591 291 MTGLQPSSTVSYRYGSE 307 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~ 307 (639)
|+||+|+|.|.++|..-
T Consensus 86 l~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 86 ISGLKPGVDYTITVYAV 102 (121)
T ss_dssp ECCCCTTCEEEEEEEEE
T ss_pred eCCCCCCCEEEEEEEEE
Confidence 99999999999999753
No 128
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=93.47 E-value=0.62 Score=37.64 Aligned_cols=67 Identities=19% Similarity=0.350 Sum_probs=39.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
|..|..++.... ..+++.|+|...........|...-.. .... . . . + -..+++
T Consensus 4 P~~P~~l~~~~~--~~~sv~L~W~~~~~~~~i~~Y~v~~~~--~~~~--------~-~---~---------~--~~~~~~ 56 (88)
T 1k85_A 4 PTAPTNLASTAQ--TTSSITLSWTASTDNVGVTGYDVYNGT--ALAT--------T-V---T---------G--TTATIS 56 (88)
T ss_dssp CCCCEEEEEEEE--CSSCEEEEEECCSCCSSEEEEEEEESS--SEEE--------E-E---S---------S--SEEEEC
T ss_pred cCCCCccEEEec--cCCEEEEEECCCCCCCCccEEEEEECC--EEEe--------e-c---C---------C--CEEEeC
Confidence 567766666553 357999999865433334444421000 0000 0 0 0 1 135789
Q ss_pred CCCCCcEEEEEEcc
Q 006591 293 GLQPSSTVSYRYGS 306 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~ 306 (639)
+|+||+.|+|+|..
T Consensus 57 ~L~~~t~Y~~~V~A 70 (88)
T 1k85_A 57 GLAADTSYTFTVKA 70 (88)
T ss_dssp CCCSSCEEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999975
No 129
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.46 E-value=0.27 Score=42.35 Aligned_cols=19 Identities=16% Similarity=0.307 Sum_probs=16.9
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+++||+|++.|.|||..
T Consensus 69 ~~~v~~L~p~t~Y~frV~A 87 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIA 87 (112)
T ss_dssp EEEECSCCSSCCEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEE
Confidence 4678999999999999975
No 130
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=93.43 E-value=0.74 Score=43.33 Aligned_cols=86 Identities=16% Similarity=0.204 Sum_probs=50.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCC------CC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGD------KE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~------~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
+..|..+..... +.++++|+|.... .. .-.|+|...+..... .... .
T Consensus 5 ~~~P~~l~~~~~--~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~---------------------~ 60 (211)
T 3p4l_A 5 MMPPVGVQASIL--SHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK-YKNA---------------------N 60 (211)
T ss_dssp CCCCEEEEEEEC--SSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CC-CEEE---------------------E
T ss_pred CCCCCCEEEEec--CCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcce-EEEe---------------------C
Confidence 345766666543 3579999999632 11 236777644322110 0000 0
Q ss_pred ceEEEEEecCCCCCcEEEEEEccC-C---CccceeeEEECCCC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSE-A---VDWSDKIQFRTPPA 322 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~-~---~~~S~~~~F~T~P~ 322 (639)
+.....+|++|+|+|.|.++|..- . ..||....|+|.+.
T Consensus 61 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 61 ATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp ESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred CCceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 112367899999999999999742 1 24677888998653
No 131
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=93.39 E-value=0.3 Score=40.54 Aligned_cols=71 Identities=21% Similarity=0.362 Sum_probs=42.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
+..|..+++.-.. .+++.|+|...... .-.|+|...+.......... + +-...++
T Consensus 5 ~~~P~~l~v~~~t--~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~v------------~---------~~~t~~~ 61 (97)
T 3qht_C 5 SSVPTKLEVVAAT--PTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTV------------P---------GSSSTAT 61 (97)
T ss_dssp CCSSSSCEEEEEE--TTEEEEECCCCCSSCCEEEEEEEESSSCSCCEEEEE------------E---------TTCCEEE
T ss_pred CCCCCceEEEecC--CCEEEEEEeCCCCCCCEEEEEEEECCCCCccEEEEe------------C---------CCcCEEE
Confidence 4467666665543 57999999865332 12677774432110000000 1 1123678
Q ss_pred ecCCCCCcEEEEEEcc
Q 006591 291 MTGLQPSSTVSYRYGS 306 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~ 306 (639)
|+||+|+|.|..+|..
T Consensus 62 l~~L~p~t~Y~v~V~A 77 (97)
T 3qht_C 62 ISGLSPGVDYTITVYA 77 (97)
T ss_dssp ECSCCTTCEEEEEEEE
T ss_pred eCCCCCCCEEEEEEEE
Confidence 9999999999999875
No 132
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=93.29 E-value=0.79 Score=42.16 Aligned_cols=95 Identities=16% Similarity=0.183 Sum_probs=54.3
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+++... ..++++|+|.-.... .-.|+|...+.. . ..... +. .....
T Consensus 6 ~p~~P~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~-~-~~~~~------------~~---------~~~~~ 60 (186)
T 1qr4_A 6 DLDNPKDLEVSDP--TETTLSLRWRRPVAKFDRYRLTYVSPSGK-K-NEMEI------------PV---------DSTSF 60 (186)
T ss_dssp --CCCEEEEEESC--CSSEEEEEEECCSSCCSEEEEEEECTTCC-E-EEEEE------------CT---------TCSEE
T ss_pred CCcCCCceEEEec--CCCEEEEEEeCCCCCccEEEEEEEeCCCC-e-eEEEC------------CC---------CCCEE
Confidence 3667877766653 457999999965432 236777632211 0 00000 00 11246
Q ss_pred EecCCCCCcEEEEEEccC-CCccce--eeEEECCCCCCCCceEEEE
Q 006591 290 VMTGLQPSSTVSYRYGSE-AVDWSD--KIQFRTPPAGGSDEMKFLA 332 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~-~~~~S~--~~~F~T~P~~g~~~~~f~v 332 (639)
+++||+|++.|.++|... +.+.|. ...++|.|.+. ..+++..
T Consensus 61 ~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~P-~~l~~~~ 105 (186)
T 1qr4_A 61 ILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGSP-KGISFSD 105 (186)
T ss_dssp EEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCCC-SCEEEES
T ss_pred EECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCCC-CccEEEE
Confidence 889999999999999753 233443 45677876542 4555543
No 133
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=93.28 E-value=4.8 Score=40.96 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=54.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
+..|..+.+.. ...+++.|.|...... . -.|+|...+.......... + +.....+
T Consensus 186 ~~~P~~l~~~~--~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~~ 242 (368)
T 1fnf_A 186 LDSPTGIDFSD--ITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRV------------P---------HSRNSIT 242 (368)
T ss_dssp CCCCEEEEEES--CCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEEEE------------E---------TTCCEEE
T ss_pred CCCCCccEEEE--ccCCEEEEEEeCCCCCcCEEEEEEecCCCCCCccEEEe------------C---------CCcCEEE
Confidence 45676555543 3458999999965432 2 3677774432111110000 0 1113568
Q ss_pred ecCCCCCcEEEEEEccCC-Cccc--eeeEEECCCCCCCCceEEEEEec
Q 006591 291 MTGLQPSSTVSYRYGSEA-VDWS--DKIQFRTPPAGGSDEMKFLAYGD 335 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~~-~~~S--~~~~F~T~P~~g~~~~~f~v~gD 335 (639)
++||+|++.|.|+|..-+ .+.+ ....+.++|.. +..+++...++
T Consensus 243 i~~L~p~t~Y~~~V~A~n~~g~~~~~~~~~~t~p~~-P~~l~~~~~~~ 289 (368)
T 1fnf_A 243 LTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDV-PRDLEVVAATP 289 (368)
T ss_dssp EESCCTTCEEEEEEEEEETTEECCCEEEEEECCCCS-CEEEEEEEEET
T ss_pred ECCCCCCCEEEEEEEEEeCCccCCcccccccCCCCC-CCeeEEEecCC
Confidence 899999999999997521 2222 23456676653 23566655554
No 134
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=93.27 E-value=0.36 Score=40.46 Aligned_cols=70 Identities=23% Similarity=0.357 Sum_probs=41.8
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCC--C--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDK--E--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~--~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
..|..+++.-. +.+++.|.|..... . .-.|+|...+...... .... |. -...+
T Consensus 6 ~~P~~l~v~~~--t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~--~~~v----------~~---------~~t~~ 62 (101)
T 3k2m_C 6 SVPTKLEVVAA--TPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQ--EFTV----------PY---------SSSTA 62 (101)
T ss_dssp BSSCEEEEEEE--ETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCE--EEEE----------ET---------TCCEE
T ss_pred CCCcceEEeec--CCCEEEEEecCCCCCCceeeEEEEEEECCCCCccE--EEEc----------CC---------CccEE
Confidence 45766666543 35799999986542 1 1267777543211100 0000 11 11367
Q ss_pred EecCCCCCcEEEEEEcc
Q 006591 290 VMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~ 306 (639)
+|+||+|+|.|..+|..
T Consensus 63 ~l~~L~p~t~Y~~~V~A 79 (101)
T 3k2m_C 63 TISGLSPGVDYTITVYA 79 (101)
T ss_dssp EECSCCTTCEEEEEEEE
T ss_pred EECCCCCCCEEEEEEEE
Confidence 89999999999999865
No 135
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=93.26 E-value=1.1 Score=42.16 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=54.4
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|..+.+.. ...++++|.|...... .-.|+|...+.......... + +.....++
T Consensus 25 ~P~~l~~~~--~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~~i 81 (203)
T 2gee_A 25 QPTDLSFVD--ITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFV------------D---------SSVGYYTV 81 (203)
T ss_dssp CCEEEEEEC--CTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEEEE------------E---------TTCCEEEE
T ss_pred CCCccEEEe--cCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeEEc------------C---------CCccEEEe
Confidence 565554444 3458999999966542 23677764433211000000 0 01125789
Q ss_pred cCCCCCcEEEEEEcc-CCCccceeeEEECCCCC-CCCceEEEEEec
Q 006591 292 TGLQPSSTVSYRYGS-EAVDWSDKIQFRTPPAG-GSDEMKFLAYGD 335 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~-~~~~~S~~~~F~T~P~~-g~~~~~f~v~gD 335 (639)
++|+|+|.|.++|.. .+.+.|....+++.+.. ....+++...++
T Consensus 82 ~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 82 TGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp CSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred CCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcCCCceEEEEcCC
Confidence 999999999999975 33345665555543222 223466655554
No 136
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.26 E-value=0.51 Score=40.87 Aligned_cols=89 Identities=21% Similarity=0.312 Sum_probs=48.0
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-C----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-P----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
-|..|..+.+... ..++++|.|...... . -.|+|....... . .+..-... +. ..
T Consensus 16 ~P~~P~~~~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~-~---~w~~~~~~------~~---------~~ 74 (127)
T 1uey_A 16 VPNPPFDLELTDQ--LDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKP-G---LWHHQTEV------SG---------TQ 74 (127)
T ss_dssp SCCCCEEEEEECC--SSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCT-T---CEEEEEEE------ES---------SC
T ss_pred CCcCCCCcEEEEc--cCCEEEEEEECCCCCCCCceEEEEEEEECCCCC-C---ccEEEeee------CC---------Cc
Confidence 3667776666543 357999999964322 2 256665332110 0 11100000 00 00
Q ss_pred EEEEecCCCCCcEEEEEEccC-CC---cccee-eEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE-AV---DWSDK-IQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~-~~---~~S~~-~~F~T~P~ 322 (639)
.. .+.+|+|+|.|.|||..- .. .+|.. ..|+|.+.
T Consensus 75 ~~-~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 75 TT-AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CE-EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred eE-EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 12 367999999999999752 22 35555 47888653
No 137
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=93.19 E-value=0.59 Score=44.04 Aligned_cols=88 Identities=17% Similarity=0.268 Sum_probs=51.6
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..+.+...+.+.+++.|+|....... -.|+|...+...... +..... + +.....
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~---~~~~~~-------~---------~~~~~~ 168 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD---WVIEPV-------V---------GNRLTH 168 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGG---SEEEEE-------E---------SSCSEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCc---eEEEEe-------c---------CCeeEE
Confidence 6766776655323579999999644211 267777443321110 000000 0 112357
Q ss_pred EecCCCCCcEEEEEEccC----CCccceeeEEECCC
Q 006591 290 VMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPP 321 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P 321 (639)
+|+||+|++.|.++|..- ...+|+...|++..
T Consensus 169 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 169 QIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp EECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 899999999999999642 12477888888753
No 138
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=93.10 E-value=0.42 Score=46.29 Aligned_cols=86 Identities=13% Similarity=0.228 Sum_probs=53.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|.-+++.... ..+++.|+|...... .-.|+|...+...+...... . +..
T Consensus 122 p~pP~~l~~~~~~-~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~~~------------~---------~~~ 179 (227)
T 1eer_B 122 LDAPVGLVARLAD-ESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEI------------L---------EGR 179 (227)
T ss_dssp CCCCEEEEEEECS-STTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEEEE------------C---------TTC
T ss_pred cCcCcceEEEEcC-CCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEEEE------------e---------cCc
Confidence 6678877777643 247899999976532 13677774433222110000 0 011
Q ss_pred EEEEecCCCCCcEEEEEEccCC---------CccceeeEEECC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA---------VDWSDKIQFRTP 320 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~---------~~~S~~~~F~T~ 320 (639)
..+.|.+|+|||+|..||.... ..||....|+|+
T Consensus 180 ~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 180 TECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp CEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred eEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 2578899999999999997531 247888889994
No 139
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.06 E-value=0.49 Score=40.39 Aligned_cols=72 Identities=17% Similarity=0.251 Sum_probs=41.9
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+++... ..+++.|+|....... -.|+|...+.......... ++..
T Consensus 17 ~P~~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~---------------------~~~~ 73 (119)
T 1wfn_A 17 VPGPVGHLSFSEI--LDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYL---------------------PNVT 73 (119)
T ss_dssp SCCCCSCCEEESC--CSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCEEE---------------------CSSC
T ss_pred CCCCCCceEEEEC--CCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEEEEe---------------------CCCc
Confidence 3556766655543 4579999998553321 2566654332111000000 0122
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..++|++|+|+|.|.+||..
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A 93 (119)
T 1wfn_A 74 LEYRVTGLTALTTYTIEVAA 93 (119)
T ss_dssp CEEEEESCCTTCEEEEEEEE
T ss_pred eEEEEcCCCCCCEEEEEEEE
Confidence 46789999999999999975
No 140
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=92.88 E-value=1.1 Score=43.00 Aligned_cols=99 Identities=12% Similarity=0.203 Sum_probs=57.8
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
+..|..+.+... ..++++|+|.-.... .-.|+|...+..... ..... +.....+
T Consensus 6 ~~~P~~l~~~~~--~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~-~~~~~---------------------~~~~~~~ 61 (234)
T 3f7q_A 6 LGAPQNPNAKAA--GSRKIHFNWLPPSGKPMGYRVKYWIQGDSESE-AHLLD---------------------SKVPSVE 61 (234)
T ss_dssp CCCCEEEEEEEC--SSSCEEEEEECCSSCCCEEEEEEEETTSCGGG-CEEEE---------------------ESSSEEE
T ss_pred CCCCcceEEEEc--CCCEEEEEEECCCCccceEEEEEEECCCCccc-eEEEc---------------------CCccEEE
Confidence 456776666654 357999999965322 236777754432110 00000 0112578
Q ss_pred ecCCCCCcEEEEEEccCC----CccceeeEEECCCCCC--CCceEEEEEec
Q 006591 291 MTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAGG--SDEMKFLAYGD 335 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~g--~~~~~f~v~gD 335 (639)
|++|+|+|.|.++|..-+ ..+|....|+|.+... ...+++...++
T Consensus 62 i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~ 112 (234)
T 3f7q_A 62 LTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSS 112 (234)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSS
T ss_pred ECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecC
Confidence 999999999999986421 2367778898864321 23456554444
No 141
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=92.86 E-value=1.1 Score=41.94 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=41.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+.... ...+++.|+|...... .-.|+|.. +...+...... + +..
T Consensus 109 ~P~~P~~~~~~~--~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~-~~~~~~~~~~~------------~---------~~~ 164 (209)
T 2vkw_A 109 EPSAPKLEGQMG--EDGNSIKVNLIKQDDGGSPIRHYLVRYRA-LSSEWKPEIRL------------P---------SGS 164 (209)
T ss_dssp SCCCCEEEEEEC--TTSSCEEEEEECCCCTTSCCCEEEEEEEE-TTSCCCCCEEE------------C---------TTC
T ss_pred CCCCCccccccc--ccCCeEEEEEECcccCCCCCceEEEEEEC-CCCCCceeeec------------C---------CCc
Confidence 366776644433 3458999999975321 12677764 22111110000 0 112
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
...+|++|+|+|.|.++|..
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A 184 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVA 184 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred cEEEecCCCCCCEEEEEEEE
Confidence 35689999999999999975
No 142
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=92.44 E-value=0.95 Score=44.24 Aligned_cols=86 Identities=13% Similarity=0.275 Sum_probs=51.5
Q ss_pred CCCCCceeEEeeccCCC----CceEEEEEeCCCC---------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCC
Q 006591 212 NPKKPLYGHLSSVDSTG----TSMRLTWVSGDKE---------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDF 278 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~----~sm~v~W~T~~~~---------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~ 278 (639)
.|..|.-+.+.+..... .++.|.|...... .-.|+|...+...+ .... +.
T Consensus 130 ~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w------~~~~--------~~--- 192 (236)
T 1axi_B 130 QPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKW------KMMD--------PI--- 192 (236)
T ss_dssp CCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSC------EECC--------CB---
T ss_pred ccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCce------EEEe--------cc---
Confidence 46778777655533222 3599999976432 12667765433211 1100 00
Q ss_pred CccCCceEEEEEecCCCCCcEEEEEEccC---C---CccceeeEEECC
Q 006591 279 GWHNPGYIHTAVMTGLQPSSTVSYRYGSE---A---VDWSDKIQFRTP 320 (639)
Q Consensus 279 g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~---~---~~~S~~~~F~T~ 320 (639)
....+.|.+|+||++|..||... + ..||....|+|+
T Consensus 193 ------~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 193 ------LTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp ------SSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ------CCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 11357889999999999999752 1 146777888875
No 143
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=92.43 E-value=0.28 Score=41.39 Aligned_cols=71 Identities=24% Similarity=0.427 Sum_probs=42.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC---C-C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK---E-P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~---~-~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
+..|..+++.-. +.++++|.|..... . . -.|+|...+.......... + +-..
T Consensus 8 ~~~P~~l~v~~~--t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~~~v------------~---------~~~t 64 (103)
T 3t04_D 8 SSVPTKLEVVDA--TPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTV------------P---------GYYS 64 (103)
T ss_dssp CCCCCSCEEEEE--ETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEEEEE------------E---------TTCC
T ss_pred CCCCceeEEEec--CCCEEEEEccCCCCCCCccceEEEEEEECCCCCccEEEEc------------C---------CCcC
Confidence 446766666543 35899999986542 1 1 2677875432111000000 1 1123
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
.++|+||+|+|.|..+|..
T Consensus 65 s~~l~~L~p~t~Y~~~V~A 83 (103)
T 3t04_D 65 TATISGLKPGVDYTITVYA 83 (103)
T ss_dssp EEEECSCCTTCCEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEE
Confidence 6889999999999999865
No 144
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=92.12 E-value=0.86 Score=45.04 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=27.4
Q ss_pred EEEecCCCCCcEEEEEEccC---CCccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE---AVDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~---~~~~S~~~~F~T~P 321 (639)
..+|+||+|+|.|.++|..- +..+|....|+|++
T Consensus 254 ~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 254 EYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 57899999999999999642 22478889999975
No 145
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=92.07 E-value=0.71 Score=39.84 Aligned_cols=22 Identities=32% Similarity=0.368 Sum_probs=18.7
Q ss_pred eEEEEEecCCCCCcEEEEEEcc
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
-...++++||+|++.|.+||..
T Consensus 69 ~~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 69 KSFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp EEEEEEECSCCSSEEEEEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEEEE
Confidence 3456789999999999999975
No 146
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=92.04 E-value=0.38 Score=52.81 Aligned_cols=129 Identities=13% Similarity=0.161 Sum_probs=70.5
Q ss_pred eeEEEEEEeeeccceEEEEeec-CCc-cceeeeccccccccCCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEE
Q 006591 173 GGSIIFHVINIRTDIEFVFFAG-GFA-TPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQV 245 (639)
Q Consensus 173 ~g~~~~~l~n~r~~~~f~~f~~-g~~-~~~~~a~s~~v~~~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V 245 (639)
..+.+|.+...-..|.|.+.+- ++. .+..+.. ....-.-|..|..+++... ..+++.|+|...... .-+|
T Consensus 346 ~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~S~~~~-~~~~~v~P~PP~nl~v~~~--s~~sl~LsW~pP~~~~g~~l~YeV 422 (488)
T 2q7n_A 346 TYRLGVQMHPGQEIHNFTLTGRNPLGQAQSAVVI-NVTERVAPHDPTSLKVKDI--NSTVVTFSWYLPGNFTKINLLCQI 422 (488)
T ss_dssp CEEEEEECCSSCCCCEEEEEEEETTEEEEEEEEC-CGGGTBCCCCCEEEEEEEC--STTCEEEEEEEEEECSSSEEEEEE
T ss_pred eEEEEEcCCCCccEEEEEEEEEeCCCCccceEEE-EecCCCCCCCCeEEEEEec--CCCEEEEEEeCCCCCCCcceEEEE
Confidence 3455666554336677777652 111 1110000 1111124677877776553 357999999965321 1367
Q ss_pred EEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEccC--C----CccceeeEEEC
Q 006591 246 EYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSE--A----VDWSDKIQFRT 319 (639)
Q Consensus 246 ~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~--~----~~~S~~~~F~T 319 (639)
+|...+...+....+. . +. ....+.+.|.+|+|+|+|..||... + ..||+...|+|
T Consensus 423 ~Yr~~~~~~w~~~~~~--~---------~~-------~~~~~~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~~T 484 (488)
T 2q7n_A 423 EICKANSKKEVRNATI--R---------GA-------EDSTYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLT 484 (488)
T ss_dssp EEBCTTSCCEEEEEEE--E---------CC-------EEEEEEEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCBCC
T ss_pred EEEECCCCCceEEEEE--e---------cC-------CCcEEEEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeEEC
Confidence 7775443211000000 0 00 0134667999999999999998642 1 25788888999
Q ss_pred CCC
Q 006591 320 PPA 322 (639)
Q Consensus 320 ~P~ 322 (639)
++.
T Consensus 485 ~e~ 487 (488)
T 2q7n_A 485 TEA 487 (488)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 147
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.99 E-value=0.67 Score=40.02 Aligned_cols=90 Identities=18% Similarity=0.156 Sum_probs=49.5
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCc-c-----cceeeeeeccccccCCCCCCCCCCCccCCc
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKT-Q-----TSEVSTFTQENMCSSALPSPAKDFGWHNPG 284 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~-~-----~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g 284 (639)
|..|..+++. +-+.++++|+|...... .-.|+|...... . ......... + +
T Consensus 9 pp~p~~L~v~--~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v----------~---------~ 67 (112)
T 2cui_A 9 RPRLSQLSVT--DVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMV----------P---------G 67 (112)
T ss_dssp CCCCCCCEEE--SCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEE----------E---------T
T ss_pred CCCCCceEEE--eecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEEc----------C---------C
Confidence 3445444444 45678999999865432 237888743221 0 000000000 1 1
Q ss_pred eEEEEEecCCCCCcEEEEEEccCC-Cccc--eeeEEECCCCC
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGSEA-VDWS--DKIQFRTPPAG 323 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~~~-~~~S--~~~~F~T~P~~ 323 (639)
-...++|+||+|+|+|..+|..-. .+-| .....+|.+.+
T Consensus 68 ~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 68 TRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 123689999999999999986422 2223 33557776544
No 148
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.89 E-value=1.1 Score=36.62 Aligned_cols=69 Identities=25% Similarity=0.372 Sum_probs=40.0
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
.|..+++.... .+++.|+|.-.... .-.|+|...+... .. .+. . . .+-...++|+
T Consensus 4 ~P~~l~~~~~~--~~si~lsW~~p~~~i~~Y~v~y~~~~~~~----~~-----~~~-~---~--------~~~~~~~~l~ 60 (94)
T 1j8k_A 4 RPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDGI----HE-----LFP-A---P--------DGEEDTAELQ 60 (94)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTEE----EE-----ECC-C---C--------CSSCCEEEEC
T ss_pred CCCccEEEeec--CCEEEEEEcCCCCCcceEEEEEEeCCCCC----ce-----EEe-c---C--------CCCccEEEeC
Confidence 35555555433 47999999754421 2367786433210 00 000 0 0 0112367899
Q ss_pred CCCCCcEEEEEEcc
Q 006591 293 GLQPSSTVSYRYGS 306 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~ 306 (639)
||+|||.|.++|..
T Consensus 61 ~L~p~t~Y~~~V~A 74 (94)
T 1j8k_A 61 GLRPGSEYTVSVVA 74 (94)
T ss_dssp SCCCCSEEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999975
No 149
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=91.62 E-value=1.8 Score=42.47 Aligned_cols=100 Identities=17% Similarity=0.170 Sum_probs=57.6
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCC-CCC-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGD-KEP-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~-~~~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+.+.... .++++|.|.-.. ... -.|+|+........ ..... + +.....
T Consensus 14 ~p~~P~~l~~~~~~--~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~--~~~~~----------~---------~~~~~~ 70 (283)
T 1tdq_A 14 VIDGPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGEGGK--TTFRL----------Q---------PPLSQY 70 (283)
T ss_dssp SSCCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSSCCC--EEEEE----------C---------TTCSEE
T ss_pred CCCCCcEEEEEecC--CCeEEEEEECCCCceeEEEEEEEEecCCCCc--EEEEe----------C---------CCCCEE
Confidence 35678777766543 479999999765 222 37777532211110 01000 0 112357
Q ss_pred EecCCCCCcEEEEEEccC-CCccc--eeeEEECCCCCCCCceEEEEEec
Q 006591 290 VMTGLQPSSTVSYRYGSE-AVDWS--DKIQFRTPPAGGSDEMKFLAYGD 335 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~-~~~~S--~~~~F~T~P~~g~~~~~f~v~gD 335 (639)
.+++|+|++.|.++|... +.+.| ....|+|+|.+ +..+++...++
T Consensus 71 ~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~-P~~l~~~~~~~ 118 (283)
T 1tdq_A 71 SVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDA-PKNLRVGSRTA 118 (283)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC-CEEEEEEEECS
T ss_pred EecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCC-CCceEEEecCC
Confidence 899999999999999752 22333 34568887654 24566655554
No 150
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=91.56 E-value=0.4 Score=41.28 Aligned_cols=72 Identities=22% Similarity=0.251 Sum_probs=43.2
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+.+.... .+++.|.|...... .-.|+|...+...+.... .. ..
T Consensus 17 ~P~~P~~l~~~~~~--~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~----~~------------------~~ 72 (120)
T 2yux_A 17 RPGPPQIVKIEDVW--GENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVI----EH------------------YH 72 (120)
T ss_dssp CCCCCSCEEEEEEE--TTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEE----SS------------------CC
T ss_pred CCCcCCCCEEEEec--CCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEee----ec------------------CC
Confidence 36677776665433 47999999864321 236777754332221110 00 00
Q ss_pred EEEEEecCCCCCcEEEEEEccC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSE 307 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~ 307 (639)
....++++|+|++.|.|||...
T Consensus 73 ~~~~~v~~L~p~t~Y~frV~A~ 94 (120)
T 2yux_A 73 RTSATITELVIGNEYYFRVFSE 94 (120)
T ss_dssp SSCCEECCCCSSEEEEEEECCC
T ss_pred cCEEEECCCCCCCEEEEEEEEe
Confidence 1235789999999999999764
No 151
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=91.47 E-value=1.9 Score=43.79 Aligned_cols=86 Identities=12% Similarity=0.170 Sum_probs=51.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCc
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPG 284 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g 284 (639)
.|..|..+++.......+++.|+|...... .-.|+|...+...+... ... +
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~---~~~-------------------~ 253 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTW---MVK-------------------D 253 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEE---ECG-------------------G
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEE---ccc-------------------C
Confidence 367787777766543347999999965431 12677775443222111 000 0
Q ss_pred eEEEEEecCCCCCcEEEEEEccCC----C---ccceeeEEEC
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGSEA----V---DWSDKIQFRT 319 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~~~----~---~~S~~~~F~T 319 (639)
.....+|.+|+|++.|..||...+ . .||+...++|
T Consensus 254 ~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 254 LQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp GCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 113568999999999999997532 1 3556555555
No 152
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=91.41 E-value=0.86 Score=42.97 Aligned_cols=70 Identities=21% Similarity=0.305 Sum_probs=40.7
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
..|...++.-. +.+++.|+|...... .-.|+|...+.......... + +-...++|
T Consensus 105 ~~P~~l~v~~~--t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~~v------------~---------~~~t~~~l 161 (195)
T 2qbw_A 105 SVPTNLEVVAA--TPTSLLISWDASYYGVSYYRITYGETGGNSPVQEFTV------------P---------YSSSTATI 161 (195)
T ss_dssp CSSCCCEEEEE--ETTEEEEECCCCCSSCSEEEEEEEETTCCSCCEEEEE------------E---------TTCSEEEE
T ss_pred CCCcccEEEeC--CCCEEEEEEeCCCCCccEEEEEEEECCCCCcceEEEe------------C---------CCCCEEEe
Confidence 34555555443 357999999755432 23677764432110000000 1 11136899
Q ss_pred cCCCCCcEEEEEEcc
Q 006591 292 TGLQPSSTVSYRYGS 306 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~ 306 (639)
+||+|+|+|.++|..
T Consensus 162 ~gL~p~t~Y~~~V~A 176 (195)
T 2qbw_A 162 SGLKPGVDYTITVYA 176 (195)
T ss_dssp CSCCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEEEEE
Confidence 999999999999975
No 153
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=91.40 E-value=1.5 Score=40.05 Aligned_cols=70 Identities=24% Similarity=0.329 Sum_probs=42.3
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
.|..|..+.+.... .+++.|+|...... .-.|+|...+...+.... . ..
T Consensus 102 ~p~~p~~~~~~~~~--~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~---------------------~~ 156 (197)
T 3lpw_A 102 RPLPPGKITLMDVT--RNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCA--T---------------------VK 156 (197)
T ss_dssp CCCCCSCEEEEEEC--SSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEE--E---------------------ES
T ss_pred CCCCCcccEEEecc--CCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEee--c---------------------cc
Confidence 45677666655433 57999999964321 126677644432211100 0 00
Q ss_pred EEEEEecCCCCCcEEEEEEcc
Q 006591 286 IHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
....++++|+|++.|.|+|..
T Consensus 157 ~~~~~~~~L~p~t~Y~~~V~A 177 (197)
T 3lpw_A 157 VTEATITGLIQGEEYSFRVSA 177 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEE
T ss_pred ccEEEeCCcCCCCEEEEEEEE
Confidence 124689999999999999975
No 154
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=91.34 E-value=1.2 Score=40.84 Aligned_cols=71 Identities=23% Similarity=0.185 Sum_probs=43.0
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC--C----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK--E----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+++... ..+++.|.|..... . .-.|+|...+...+.... .. ..
T Consensus 5 ~P~~P~~l~~~~~--~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~-------------------~~ 60 (197)
T 3lpw_A 5 TPGPPQDLKVKEV--TKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA---TN-------------------CH 60 (197)
T ss_dssp SCCCCEEEEEEEE--CSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEE---EE-------------------EC
T ss_pred CCCCCCCcEEEEe--cCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEee---cC-------------------CC
Confidence 4677877666543 35799999997532 1 126677644332211110 00 01
Q ss_pred EEEEEecCCCCCcEEEEEEcc
Q 006591 286 IHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
....++++|+|++.|.|+|..
T Consensus 61 ~~~~~~~~L~p~t~Y~~~V~a 81 (197)
T 3lpw_A 61 KTSWKVDQLQEGCSYYFRVLA 81 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEE
T ss_pred ccEEEEcCCCCCCEEEEEEEE
Confidence 125689999999999999965
No 155
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=91.32 E-value=2.2 Score=42.15 Aligned_cols=100 Identities=13% Similarity=0.058 Sum_probs=55.6
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+.+.... .+++.|+|...... . -.|+|...+.......... + +.....+
T Consensus 21 p~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~~ 77 (290)
T 3r8q_A 21 IPAPTDLKFTQVT--PTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEINL------------A---------PDSSSVV 77 (290)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEEEE------------C---------TTCCEEE
T ss_pred CCCCCceEEEECC--CCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEEEc------------C---------CCccEEE
Confidence 5677777665543 57999999976432 2 3677775432111000000 0 1123678
Q ss_pred ecCCCCCcEEEEEEccCC-Cccc--eeeEEECCCCCC-CCceEEEEEec
Q 006591 291 MTGLQPSSTVSYRYGSEA-VDWS--DKIQFRTPPAGG-SDEMKFLAYGD 335 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~~-~~~S--~~~~F~T~P~~g-~~~~~f~v~gD 335 (639)
+++|+|++.|.++|..-+ .+.+ ....|+|.+.+. ...+++...++
T Consensus 78 i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 78 VSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp ECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCCCCCEEEEEEEECS
T ss_pred eCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCCCCCceeEEEEcCC
Confidence 999999999999997522 2222 234577764432 12345544443
No 156
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=91.24 E-value=2.8 Score=42.92 Aligned_cols=72 Identities=11% Similarity=0.134 Sum_probs=42.9
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+.+.. ...+++.|+|...... .-.|+|...+........... +-....
T Consensus 277 ~p~~P~~l~~~~--~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~~~~---------------------~~~~~~ 333 (375)
T 3t1w_A 277 GLDSPTGIDFSD--ITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRVP---------------------HSRNSI 333 (375)
T ss_dssp CCCCCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEEEEEE---------------------TTCCEE
T ss_pred CCCCCCccEeee--ccCCEEEEEECCCCcceeeEEEEEEECCCCCcceeEEcC---------------------CCccEE
Confidence 456776655543 3458999999975432 237777754321111111100 011256
Q ss_pred EecCCCCCcEEEEEEcc
Q 006591 290 VMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~ 306 (639)
+++||+||+.|.++|..
T Consensus 334 ~i~~L~p~t~Y~~~V~A 350 (375)
T 3t1w_A 334 TLTNLTPGTEYVVSIVA 350 (375)
T ss_dssp EECSCCTTCEEEEEEEE
T ss_pred EECCCCCCCEEEEEEEE
Confidence 89999999999999975
No 157
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=91.21 E-value=0.36 Score=52.95 Aligned_cols=127 Identities=17% Similarity=0.239 Sum_probs=70.7
Q ss_pred eEEEEEEeeeccceEEEEeec-CCc--cceeeeccccccccCCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEE
Q 006591 174 GSIIFHVINIRTDIEFVFFAG-GFA--TPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQV 245 (639)
Q Consensus 174 g~~~~~l~n~r~~~~f~~f~~-g~~--~~~~~a~s~~v~~~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V 245 (639)
-+..|..+.....|.|.+-+. ++. ...+ .. .......|..|..+++... ..+++.|+|...... .-+|
T Consensus 342 ~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~-~~-~~~~~VkP~PP~nl~v~~~--~stsl~LsW~~P~~~~~~~L~YeV 417 (483)
T 3e0g_A 342 YQLLFQMLPNQEIYNFTLNAHNPLGRSQSTI-LV-NITEKVYPHTPTSFKVKDI--NSTAVKLSWHLPGNFAKINFLCEI 417 (483)
T ss_dssp EEEEEECCTTCCCEEEEEEEECSSCEEEEEE-EE-CGGGGBCCCCCEEEEECCS--SSSSCCEEEECCSCCTTSBCCCEE
T ss_pred EEEEEccCCCCcEEEEEEEEEeCCCCcccce-EE-EeccccCCCCCeeeEEEEe--cCCeEEEEECCCCCCCCceEEEEE
Confidence 355666554455677766552 111 1111 00 1111235778877776543 357899999965421 3488
Q ss_pred EEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEccCC------CccceeeEEEC
Q 006591 246 EYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEA------VDWSDKIQFRT 319 (639)
Q Consensus 246 ~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~~------~~~S~~~~F~T 319 (639)
+|...+.... ...+... + . ....+.+.|.+|+|+|+|..||.... ..||+...|+|
T Consensus 418 rYr~~~~~~~--~~~vsv~---~------~-------~~~~~s~~l~~L~PgT~Y~vrVRA~~~g~g~WSeWS~~~~f~T 479 (483)
T 3e0g_A 418 EIKKSNSVQE--QRNVTIQ---G------V-------ENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLT 479 (483)
T ss_dssp EEECSSSCCC--EEECCCB---C------C-------SSSBCCCCCCSCCSSSSCEEEEECCCSSCCCCCCCCCCCCCCC
T ss_pred EEEECCCCCc--eEEEEEe---c------c-------CCceeEEEEeccCCCcEEEEEEEEeeCCCCCcCCCCCceeeEC
Confidence 9986543210 0111000 0 0 01123567999999999999997532 24778888999
Q ss_pred CCC
Q 006591 320 PPA 322 (639)
Q Consensus 320 ~P~ 322 (639)
+++
T Consensus 480 ~E~ 482 (483)
T 3e0g_A 480 TEA 482 (483)
T ss_dssp CCC
T ss_pred CCC
Confidence 753
No 158
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=91.10 E-value=1.5 Score=42.94 Aligned_cols=89 Identities=19% Similarity=0.300 Sum_probs=55.0
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-------CcEEEEecCCC-cccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-------PQQVEYGDDGK-TQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-------~~~V~yg~~g~-~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
-|..|..+.+..... ..++.|+|...... .-+|+|...+. ..+... .. .
T Consensus 112 KPdPP~nLtv~~~~~-~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v---~~----------~--------- 168 (223)
T 3up1_A 112 KPEAPFDLSVVYREG-ANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHV---NL----------S--------- 168 (223)
T ss_dssp CCCCCEEEEEEEETT-TTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEE---EE----------S---------
T ss_pred EcCCCcceEEEEEcC-CCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEE---Ee----------c---------
Confidence 477888777776543 35789999975421 23677775431 111110 00 0
Q ss_pred ceEEEEEecCCCCCcEEEEEEccCC-----C---ccceeeEEECCCCC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSEA-----V---DWSDKIQFRTPPAG 323 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~~-----~---~~S~~~~F~T~P~~ 323 (639)
.....+.+.+|+|+|+|..||.... . .||....|+|++..
T Consensus 169 ~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 169 STKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp SSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred CceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 1123456789999999999997421 1 36778999997653
No 159
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=90.95 E-value=0.74 Score=43.06 Aligned_cols=85 Identities=15% Similarity=0.251 Sum_probs=46.3
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|..+.+.-.....++++|.|...... .-.|+|...+.......... + +.....+|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~~i 60 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATI------------P---------GHLNSYTI 60 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEEEE------------C---------TTCCEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEEec------------C---------CCccEEEe
Confidence 355555443322368999999975321 23677874332111000000 0 11126789
Q ss_pred cCCCCCcEEEEEEccCC-Cccc--eeeEEECC
Q 006591 292 TGLQPSSTVSYRYGSEA-VDWS--DKIQFRTP 320 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~~~-~~~S--~~~~F~T~ 320 (639)
+||+|+|.|.++|..-+ .+.+ ....|+|.
T Consensus 61 ~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~ 92 (201)
T 2ha1_A 61 KGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92 (201)
T ss_dssp CSCCTTEEEEEEEEEECTTSCEEEEEEEEEEC
T ss_pred cCCCCCCEEEEEEEEEecccccCceeEEEecC
Confidence 99999999999997532 2322 23456654
No 160
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=90.89 E-value=1.2 Score=37.72 Aligned_cols=72 Identities=14% Similarity=0.129 Sum_probs=40.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEecCCC-cccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGK-TQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~~g~-~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
.|..|..+...... ..+++.|+|.....+....-|+.... .......+ . .+ +. ..+
T Consensus 4 ~P~aP~~l~a~~~~-~~~~v~LsW~~~~~~~~Y~VyR~~~~~~~~~~i~~---~----------~~-------~t--sy~ 60 (103)
T 3mpc_A 4 APAFPTGLSAVLDS-SGNTANLTWNAAPGANSYNVKRSTKSGGPYTTIAT---N----------IT-------ST--NYT 60 (103)
T ss_dssp CCCCCEEEEEEECT-TSCCEEEEEECCTTCSEEEEEEESSTTCCCEEEEE---E----------EC-------SS--EEE
T ss_pred CCCCCceeEEEEeC-CCCEEEEEEECCCCCCEEEEEEecCCCCCcEEEee---c----------CC-------CC--EEE
Confidence 36678666555422 24689999997655555544553221 11111100 0 00 01 234
Q ss_pred ecCCCCCcEEEEEEcc
Q 006591 291 MTGLQPSSTVSYRYGS 306 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~ 306 (639)
.++|+||++|+|+|..
T Consensus 61 d~~l~~g~~Y~Y~V~A 76 (103)
T 3mpc_A 61 DTGVATGTKYYYVVSA 76 (103)
T ss_dssp ETTCCTTCCCEEEEEE
T ss_pred ECCCCCCCEEEEEEEE
Confidence 5899999999999964
No 161
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=90.82 E-value=1.5 Score=41.13 Aligned_cols=37 Identities=27% Similarity=0.487 Sum_probs=27.5
Q ss_pred EEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPAGG 324 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~~g 324 (639)
..+|.+|+|++.|.|||...+ . .+|....|+|+|..|
T Consensus 174 ~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 174 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp EEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred cEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 578999999999999996522 2 367788899998654
No 162
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.76 E-value=0.65 Score=39.91 Aligned_cols=86 Identities=15% Similarity=0.052 Sum_probs=49.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC----C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE----P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~----~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
+..|..+.+.. ..+++.|+|.-.... . -.|+|.. +...+..... . . + +-..
T Consensus 8 ~~pP~~l~v~~---~~~sv~L~W~pP~~~~~~I~gY~vey~~-~~~~W~~~~~---~--~------~---------~~~t 63 (108)
T 1v5j_A 8 LSPPRGLVAVR---TPRGVLLHWDPPELVPKRLDGYVLEGRQ-GSQGWEVLDP---A--V------A---------GTET 63 (108)
T ss_dssp CCCCEEEEEEE---CSSSEEEEEECCSCCSSCCCBEEEEEEE-TTCCCEEEEE---E--E------C---------SSCC
T ss_pred CCCCcceEEEE---eCCEEEEEECCCCCCCCCCcEEEEEEEe-CCCCcEEeee---e--c------C---------CCcC
Confidence 34666666653 347899999966432 1 2788875 3222221110 0 0 0 1123
Q ss_pred EEEecCCCCCcEEEEEEccCC-Cc---cceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-VD---WSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~~---~S~~~~F~T~P~ 322 (639)
..++.+|+|+++|.+||..-+ .+ .|+...++|...
T Consensus 64 ~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 64 ELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 567999999999999986422 22 455666666543
No 163
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=90.68 E-value=0.26 Score=41.52 Aligned_cols=62 Identities=18% Similarity=0.258 Sum_probs=37.4
Q ss_pred ccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEE
Q 006591 224 VDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVS 301 (639)
Q Consensus 224 ~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~ 301 (639)
.+-+.++++|+|...... .-.|+|.......... ... -++-...++|+||+|||+|.
T Consensus 15 t~vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~--~~~-------------------v~g~~~s~~l~~L~PgT~Y~ 73 (95)
T 2h41_A 15 TEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ--YLD-------------------LPSTATSVNIPDLLPGRKYI 73 (95)
T ss_dssp CCCGGGCEEEECCCSCTTEEEEEEEEEETTTCCCCE--EEE-------------------EETTCCEEEECSCCTTCEEE
T ss_pred EEeCCCeEEEEECCCCCCccEEEEEEEeCCCCCcce--EEE-------------------CCCCccEEEECCCCCCCEEE
Confidence 445568999999865432 2377776543211100 000 01222468999999999999
Q ss_pred EEEcc
Q 006591 302 YRYGS 306 (639)
Q Consensus 302 Yrvg~ 306 (639)
-.|..
T Consensus 74 V~v~a 78 (95)
T 2h41_A 74 VNVYQ 78 (95)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88764
No 164
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=90.52 E-value=8.8 Score=43.41 Aligned_cols=37 Identities=14% Similarity=0.259 Sum_probs=27.0
Q ss_pred EEEEEecCCCCCcEEEEEEccCC----Ccccee---eEEECCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEA----VDWSDK---IQFRTPPA 322 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~---~~F~T~P~ 322 (639)
...++|+||+|+|.|.+||..-+ ..+|.. ..|+|.+.
T Consensus 333 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 333 QNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred eeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 35788999999999999996421 235554 77888654
No 165
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.32 E-value=0.24 Score=41.83 Aligned_cols=72 Identities=14% Similarity=0.169 Sum_probs=42.4
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+++.-.. .+++.|+|...... .-.|+|...+..... .+- . .+ +-...+
T Consensus 7 ~p~~P~~l~v~~~t--~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~---------~~~-~--v~---------~~~~~~ 63 (105)
T 2ekj_A 7 GRSPPSNLALASET--PDSLQVSWTPPLGRVLHYWLTYAPASGLGPE---------KSV-S--VP---------GARSHV 63 (105)
T ss_dssp TCCCCEEEEEEEEE--TTEEEEEEECCSSCCSBBCBBCCCTTSCSCC---------CCB-C--CB---------TTSSEE
T ss_pred CCCCCCceEEEeCC--CCEEEEEEeCCCCcceEEEEEEEECCCCCcc---------EEE-E--eC---------CCcCEE
Confidence 35678777776543 57999999976432 125556532211000 000 0 01 122367
Q ss_pred EecCCCCCcEEEEEEcc
Q 006591 290 VMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~ 306 (639)
+|+||+|+|.|.++|..
T Consensus 64 ~l~~L~p~t~Y~~~V~A 80 (105)
T 2ekj_A 64 TLPDLQAATKYRVLVSA 80 (105)
T ss_dssp EECSCCSSCCCBCBBCB
T ss_pred EeCCCCCCCEEEEEEEE
Confidence 89999999999999875
No 166
>2lfe_A E3 ubiquitin-protein ligase HECW2; structural genomics, northeast structural genomics consortiu SGC; NMR {Homo sapiens}
Probab=90.20 E-value=0.32 Score=42.56 Aligned_cols=40 Identities=10% Similarity=0.116 Sum_probs=30.7
Q ss_pred CeeEEEecCCC-CCCCCCEEEEEEeccCCCCCCCEEEEEcC
Q 006591 69 PFLNISVSKSS-DLSDEEFVTVTVTGVLHPSRHDWVAMISP 108 (639)
Q Consensus 69 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~p 108 (639)
..-.|++++.. .|-++|.++|.|.=-..-.+.||||||--
T Consensus 33 sRSsLt~S~~~ytiG~~q~lvI~WDIKEev~a~DWIGLy~i 73 (138)
T 2lfe_A 33 SRSSLTASMYEYTLGQAQNLIIFWDIKEEVDPSDWIGLYHI 73 (138)
T ss_dssp CCCEEEESCSEEETTCSCCEEEEEECCSCCCTTCEEEEEEC
T ss_pred ccceeEEEeeEEEecCCCcEEEEEeccCccCccceEEEEEe
Confidence 34456676555 77788899999996555599999999964
No 167
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=90.12 E-value=2.5 Score=43.11 Aligned_cols=72 Identities=21% Similarity=0.323 Sum_probs=42.9
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
-|..|..+.+.... .+++.|+|...... .-.|+|...+.......... + +-....
T Consensus 275 ~p~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~ 331 (368)
T 1fnf_A 275 VSDVPRDLEVVAAT--PTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTV------------P---------GSKSTA 331 (368)
T ss_dssp CCCSCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEEETTCCSCCEEEEE------------E---------TTCCEE
T ss_pred CCCCCCeeEEEecC--CCEEEEEeeCCCCccceEEEEEEECCCCCccEEEEc------------C---------CCeeEE
Confidence 35667666555433 47999999865432 23677764432211100010 0 112357
Q ss_pred EecCCCCCcEEEEEEcc
Q 006591 290 VMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~ 306 (639)
+++||+||+.|.|+|..
T Consensus 332 ~~~~L~p~t~Y~~~V~A 348 (368)
T 1fnf_A 332 TISGLKPGVDYTITVYA 348 (368)
T ss_dssp EECSCCTTCCEEEEEEE
T ss_pred EecCCCCCCEEEEEEEE
Confidence 89999999999999964
No 168
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=89.83 E-value=0.32 Score=42.77 Aligned_cols=35 Identities=20% Similarity=0.390 Sum_probs=27.9
Q ss_pred EEEecCCCCCcEEEEEEccCCC----ccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEAV----DWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~~----~~S~~~~F~T~P~ 322 (639)
.++++||+|+|+|.+||..-+. .||+...++|.+.
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 4689999999999999976332 3677888999765
No 169
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=89.62 E-value=1.3 Score=36.91 Aligned_cols=84 Identities=14% Similarity=0.253 Sum_probs=53.3
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|.|+-++...+-.++-.|.|.....+ .-.+.|+...... .+..- .-|+....-+|
T Consensus 7 gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g-----~Wke~----------------~Ip~h~nSYtI 65 (98)
T 1oww_A 7 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVG-----RWKEA----------------TIPGHLNSYTI 65 (98)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSS-----CCEEE----------------EECSSCCEEEE
T ss_pred cceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCC-----ceeEE----------------EecCccceEEE
Confidence 566777766555578999999987654 2355666433210 11000 01355667799
Q ss_pred cCCCCCcEEEEEEccC-CCcccee--eEEEC
Q 006591 292 TGLQPSSTVSYRYGSE-AVDWSDK--IQFRT 319 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~~-~~~~S~~--~~F~T 319 (639)
+||+||..|+=+|-+- ..||++. +.|.|
T Consensus 66 ~GL~P~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 66 KGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp CSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred ecCCCCcEEEEEEEEeeccCcccceEEEEEe
Confidence 9999999999998764 3478765 44544
No 170
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.51 E-value=1.2 Score=38.17 Aligned_cols=68 Identities=16% Similarity=0.212 Sum_probs=40.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++... . +++.|+|.-..... -.|+|..... ....... + +-..
T Consensus 18 P~~P~~l~~~~~--~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~--~~~~~~~------------~---------~~~~ 71 (116)
T 2edb_A 18 PDQPSSLHVRPQ--T-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP--YAETVRV------------D---------SKQR 71 (116)
T ss_dssp CCCCSCEEEEEC--S-SCEEEEECCCSCTTBCCCEEEEEEEESST--TSEEEEE------------E---------TTCC
T ss_pred CCCCCCeEEEEC--C-CEEEEEEcCCCCCCCceeEEEEEEEeCCC--CeEEEEe------------C---------CCee
Confidence 567777776654 3 79999998653221 2666763211 1000000 0 1123
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+|++|+|+|.|.++|..
T Consensus 72 ~~~l~~L~p~t~Y~~~V~A 90 (116)
T 2edb_A 72 YYSIERLESSSHYVISLKA 90 (116)
T ss_dssp EEEECSCCSSSBEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEE
Confidence 5789999999999999965
No 171
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=88.91 E-value=1.7 Score=37.77 Aligned_cols=68 Identities=19% Similarity=0.324 Sum_probs=41.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++... . +++.|+|.-..... -.|+|.. +.... ..... + +...
T Consensus 28 P~~P~~l~~~~~--~-~sv~l~W~~P~~~~g~i~~Y~v~y~~-~~~~~-~~~~~------------~---------~~~~ 81 (126)
T 1x5i_A 28 PEVPSSLHVRPL--V-TSIVVSWTPPENQNIVVRGYAIGYGI-GSPHA-QTIKV------------D---------YKQR 81 (126)
T ss_dssp CCSCSEEEEEEE--T-TEEEEEEECCSCTTBCCCEEEEEECS-SCGGG-EEEEC------------C---------TTCC
T ss_pred CCCCCeeEEEec--C-CEEEEEEcCCCCCCCCEeEEEEEEEc-CCCCc-eEEEe------------C---------CCee
Confidence 567777776654 2 79999999654221 2666762 22110 00000 0 1123
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+|++|+|+|.|.++|..
T Consensus 82 ~~~i~~L~p~t~Y~~~V~A 100 (126)
T 1x5i_A 82 YYTIENLDPSSHYVITLKA 100 (126)
T ss_dssp EEEECSCCSSCEECCEEEE
T ss_pred EEEEeCCCCCCEEEEEEEE
Confidence 5789999999999999975
No 172
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=88.20 E-value=1.1 Score=43.23 Aligned_cols=91 Identities=13% Similarity=0.245 Sum_probs=53.3
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC----------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCcc
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE----------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWH 281 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~----------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~ 281 (639)
-|..|..+.+.. .+.+.|+|...... .-+|+|...+. .+.....+....
T Consensus 100 kp~PP~nltv~~----~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~~---------------- 158 (219)
T 3tgx_A 100 KPAPPFDVTVTF----SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLIS---------------- 158 (219)
T ss_dssp CCCCCEEEEEEE----SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEEC----------------
T ss_pred EeCCCCceEEEe----CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeEe----------------
Confidence 467787555552 25899999975432 23677775542 221110110000
Q ss_pred CCceEEEEEecCCCCCcEEEEEEccC---C----C---ccceeeEEECCCCC
Q 006591 282 NPGYIHTAVMTGLQPSSTVSYRYGSE---A----V---DWSDKIQFRTPPAG 323 (639)
Q Consensus 282 ~~g~~h~a~l~gL~P~t~Y~Yrvg~~---~----~---~~S~~~~F~T~P~~ 323 (639)
..+....+.+.+|+||++|..||... + . .||+...|+|++..
T Consensus 159 ~~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 159 VDSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp SSCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred cCCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 01234566788999999999999641 1 2 36888999998753
No 173
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=88.11 E-value=2.7 Score=39.10 Aligned_cols=86 Identities=12% Similarity=0.175 Sum_probs=47.9
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCC-cccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGK-TQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~-~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+.. ..++++|+|...... .-.|+|...+. ..+....... +.. .
T Consensus 6 P~~P~~~~~~~---~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~-----------~~~---------~ 62 (205)
T 1cfb_A 6 PNAPKLTGITC---QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV-----------PNT---------D 62 (205)
T ss_dssp CCCCEEEEEEE---CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEE-----------ETT---------C
T ss_pred CCCCCCcEEEe---cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeecc-----------CCC---------c
Confidence 66787766665 468999999965321 12677764322 1111110000 110 1
Q ss_pred EEEEecCCCCCcEEEEEEccC-C---Cccc-eeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE-A---VDWS-DKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~-~---~~~S-~~~~F~T~P~ 322 (639)
...++ +|+|+|.|.|||..- . ..+| ....++|.+.
T Consensus 63 ~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 63 SSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp SEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred eEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 12345 899999999999642 1 1355 4567887653
No 174
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=87.89 E-value=5.4 Score=40.07 Aligned_cols=97 Identities=16% Similarity=0.304 Sum_probs=53.6
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+++... .+++.|+|....... -+|+|...+...+.. .......|... .... .....
T Consensus 199 ~P~pP~~l~~~~~---~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~--~~~~~~~c~~~--~~~~-----~~~~~ 266 (314)
T 3bpo_C 199 KPDPPHIKNLSFH---NDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNV--FYVQEAKCENP--EFER-----NVENT 266 (314)
T ss_dssp ECCCCEEEEEEEE---TTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEE--EEESCCCCCCT--TSSC-----CCSSE
T ss_pred eeCCCCEEEEEEc---CCcEEEEEeCCCccCCceEEEEEEEEECCCCcceE--Eeccccccccc--cccc-----ccCCc
Confidence 3778887777632 369999999765321 367787544322210 01111122200 0000 01234
Q ss_pred EEEEecCCCCCcEEEEEEccCC-------C----ccceeeEEECC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA-------V----DWSDKIQFRTP 320 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~-------~----~~S~~~~F~T~ 320 (639)
..+.|.+|+|+|+|..||.... . .||....|.+-
T Consensus 267 ~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~ 311 (314)
T 3bpo_C 267 SCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKK 311 (314)
T ss_dssp EEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCC
T ss_pred eEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEeccc
Confidence 5778999999999999986421 2 35666777654
No 175
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=87.76 E-value=0.84 Score=43.92 Aligned_cols=92 Identities=16% Similarity=0.241 Sum_probs=50.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++... ..+++.|+|.-.... .-.|+|...+..... ......... ......
T Consensus 99 P~~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~---------------~~~~~~ 160 (234)
T 3f7q_A 99 PSEPGRLAFNVV--SSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRP-IGPMKKVLV---------------DNPKNR 160 (234)
T ss_dssp CCCCCCCEEEEC--SSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCB-SSCCEECCC---------------SCTTCC
T ss_pred CCCCCccEEEEe--cCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCc-cCcceEEEe---------------cCCcce
Confidence 556766666543 357899999854321 126677643332110 000000000 001123
Q ss_pred EEEecCCCCCcEEEEEEccCC----Cccce-eeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSD-KIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~-~~~F~T~P~ 322 (639)
..+|+||+|+|.|.++|..-+ ..+|. ...|+|.+.
T Consensus 161 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 161 MLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCC
Confidence 578999999999999996422 13554 467888654
No 176
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=87.51 E-value=5 Score=41.01 Aligned_cols=94 Identities=16% Similarity=0.148 Sum_probs=50.9
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
+..|..+.+... ..+++.|.|...... .-.|+|...+.......... + +-....
T Consensus 187 ~~~p~~l~~~~~--~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~ 243 (375)
T 3t1w_A 187 VPPPTDLRFTNI--GPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSI------------S---------PSDNAV 243 (375)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCSSCCCCEEEEEEEEGGGTTCCEEEEE------------C---------TTCCEE
T ss_pred CCCCceeEEEec--ccCEEEEEEcCCCCCCccEEEEEEEeCCCCCCcEEEEc------------C---------CCcCEE
Confidence 446665555433 458999999975322 23677764332111000000 0 112357
Q ss_pred EecCCCCCcEEEEEEccC-CCccc--eeeEEECCCCCCCCceEE
Q 006591 290 VMTGLQPSSTVSYRYGSE-AVDWS--DKIQFRTPPAGGSDEMKF 330 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~-~~~~S--~~~~F~T~P~~g~~~~~f 330 (639)
++++|+|++.|.++|..- +.+.+ ....++|.|.+ +..+++
T Consensus 244 ~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~t~p~~-P~~l~~ 286 (375)
T 3t1w_A 244 VLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDS-PTGIDF 286 (375)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC-CEEEEE
T ss_pred EeCCCCCCCEEEEEEEEEcCCCcCCceeeEEecCCCC-CCccEe
Confidence 899999999999999742 22223 23446676543 233444
No 177
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=86.47 E-value=0.81 Score=50.45 Aligned_cols=92 Identities=17% Similarity=0.283 Sum_probs=54.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+.+.......+++.|+|...... .-.|+|...+...+. ... ... ..+..
T Consensus 198 ~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~------~~~--------~~~-----~~~~~ 258 (589)
T 3l5h_A 198 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWS------QIP--------PED-----TASTR 258 (589)
T ss_dssp ECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCB------CCC--------TTS-----SCSCC
T ss_pred EcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcE------EEc--------ccc-----CcCce
Confidence 366777777753334568999999854321 136777654432221 100 000 01122
Q ss_pred EEEEecCCCCCcEEEEEEccCC----C---ccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----V---DWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~---~~S~~~~F~T~P~ 322 (639)
...++++|+|+|.|.+||...+ . .||....|+|.+.
T Consensus 259 ~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 259 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp SEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 4578999999999999997521 1 3577788888654
No 178
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=86.47 E-value=7.8 Score=40.79 Aligned_cols=99 Identities=19% Similarity=0.254 Sum_probs=55.8
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC-----------cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCc
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----------QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGW 280 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----------~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~ 280 (639)
-|..|..+.+...+ +.+.|+|....... -.|+|+..+ ..+....+.. .
T Consensus 108 ~p~pP~~l~v~~~~---~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~~------------~----- 166 (419)
T 2gys_A 108 QPPEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAILL------------S----- 166 (419)
T ss_dssp CCCCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEEE------------E-----
T ss_pred cCCCCCceEEEecC---CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeeec------------c-----
Confidence 36778777776643 58999999765431 256666443 2221111100 0
Q ss_pred cCCceEEEEEecCCCCCcEEEEEEccCC-------C---ccceeeEEECCCCCCCCceEEEEE
Q 006591 281 HNPGYIHTAVMTGLQPSSTVSYRYGSEA-------V---DWSDKIQFRTPPAGGSDEMKFLAY 333 (639)
Q Consensus 281 ~~~g~~h~a~l~gL~P~t~Y~Yrvg~~~-------~---~~S~~~~F~T~P~~g~~~~~f~v~ 333 (639)
....+.+.+.+|.|+++|..||.... . .||+...|+|++.....+..+-.+
T Consensus 167 --~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~ 227 (419)
T 2gys_A 167 --NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECF 227 (419)
T ss_dssp --SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEE
T ss_pred --cceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEE
Confidence 01222333449999999999997431 1 367889999987653333444333
No 179
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=86.36 E-value=3.7 Score=38.88 Aligned_cols=73 Identities=12% Similarity=0.077 Sum_probs=40.7
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC----CcEEEEecCCC-cccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE----PQQVEYGDDGK-TQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~----~~~V~yg~~g~-~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|.-+++.... ..+++.|.|...... .-+|+|...+. ..+.... . + . ...
T Consensus 109 kp~pP~~l~v~~~~-~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~---~----~-----~---------~~~ 166 (206)
T 3v6o_A 109 KPLPPSSVKAEITI-NIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYE---V----Y-----D---------AKS 166 (206)
T ss_dssp CCCCCCSCEEEEET-TTTEEEEEC--------CEEEEEEEEESSSSCCCEEEE---E----C-----C------------
T ss_pred cCCCCCceEeEEec-CCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEe---c----c-----c---------Ccc
Confidence 46778777776542 357999999965432 23667765432 1111000 0 0 0 011
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+.|.+|+|||+|..||..
T Consensus 167 ~~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 167 KSVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp CEEEECCSCTTSCEEEEEEE
T ss_pred eeEEeecCCCCCEEEEEEEE
Confidence 35789999999999999975
No 180
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=85.90 E-value=2.5 Score=39.59 Aligned_cols=22 Identities=32% Similarity=0.368 Sum_probs=18.9
Q ss_pred eEEEEEecCCCCCcEEEEEEcc
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
.....++++|+|+|.|.|||..
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A 89 (214)
T 2ibg_A 68 KSFTASVTDLKPQHTYRFRILA 89 (214)
T ss_dssp EEEEEEECSCCTTCEEEEEEEE
T ss_pred cceeEEecCCcCCCEEEEEEEE
Confidence 4567789999999999999874
No 181
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=84.82 E-value=2 Score=46.08 Aligned_cols=71 Identities=23% Similarity=0.345 Sum_probs=43.3
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCC---CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDK---EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~---~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
..|..+|+.-. +.+|++|+|....+ ..-.|+|.+.+........+. + +--.+++
T Consensus 371 ~~~~~l~~~~~--~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~~~------------~---------~~~~~~~ 427 (461)
T 3csg_A 371 SVPTNLEVVAA--TPTSLLISWDASYSSSVSYYRITYGETGGNSPVQEFTV------------P---------GSKSTAT 427 (461)
T ss_dssp CSSCCCEEEEE--CSSCEEEECCCTTGGGCSEEEEEEEETTCCSCCEEEEE------------E---------TTCCEEE
T ss_pred CCCcceEEecc--CCCeEEEEecCCCCCcceEEEEEEEECCCCccceEEEe------------c---------CCCceEE
Confidence 35766777654 35799999986522 123777765432110011110 0 1114789
Q ss_pred ecCCCCCcEEEEEEccC
Q 006591 291 MTGLQPSSTVSYRYGSE 307 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~ 307 (639)
|+||+|||+|..+|..-
T Consensus 428 i~~L~p~t~Y~~~v~a~ 444 (461)
T 3csg_A 428 ISGLSPGVDYTITVYAY 444 (461)
T ss_dssp ECSCCTTCEEEEEEEEE
T ss_pred ecCCCCCCEEEEEEEEE
Confidence 99999999999999753
No 182
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=83.66 E-value=6 Score=44.97 Aligned_cols=89 Identities=15% Similarity=0.102 Sum_probs=50.9
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCC----C---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDK----E---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~----~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
..|..+.+... ..++++|+|.-... . .-.|+|...+............. . + +..
T Consensus 361 ~~P~~~~~~~~--~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~-----~---~---------~~~ 421 (731)
T 2v5y_A 361 RGPRKLEVVEV--KSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWD-----T---E---------NSH 421 (731)
T ss_dssp CCCEEEEEEEE--CSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECC-----S---S---------CSS
T ss_pred CCCceeEEEec--cCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEE-----e---c---------CCc
Confidence 56766655543 35799999996432 1 23677875432111111100000 0 1 112
Q ss_pred EEEEecCCCCCcEEEEEEccC---CCccceeeEEECCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE---AVDWSDKIQFRTPP 321 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~---~~~~S~~~~F~T~P 321 (639)
...+|++|+|+|.|.++|..- +.+.|....++|.+
T Consensus 422 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 422 PQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDE 459 (731)
T ss_dssp CEEEECSCCSSCEEEEEEEEECSSCEEECCCEEEECCC
T ss_pred ceEEECCCCCCCEEEEEEEEEcCCCCCCCceEEEEccC
Confidence 356899999999999998652 22346778888864
No 183
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=83.51 E-value=1.1 Score=38.25 Aligned_cols=36 Identities=22% Similarity=0.249 Sum_probs=28.0
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
..++|+||+|+|.|.++|..-+ ..+|....|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 3678999999999999996421 24788888999754
No 184
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=82.75 E-value=3.5 Score=45.98 Aligned_cols=77 Identities=16% Similarity=0.241 Sum_probs=48.1
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeC--CCCC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSG--DKEP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~--~~~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+.+.-. +.++++|+|... ++.. -.||+...+...|....+ + +. .
T Consensus 9 ~P~pP~~P~v~~~--~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~------~------~~---------t 65 (573)
T 3uto_A 9 EPEPPRFPIIENI--LDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAK------S------RY---------T 65 (573)
T ss_dssp CCCCCEEEEEEEE--CSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEE------E------SS---------S
T ss_pred CCccCCCCEEEEe--eCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEecc------c------cC---------C
Confidence 3666766555443 458999999954 3322 377888766655533211 0 00 1
Q ss_pred EEEEEecCCCCCcEEEEEEccCC-Cccce
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEA-VDWSD 313 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~-~~~S~ 313 (639)
..+++||.||+.|.+||...+ .|+|+
T Consensus 66 --~~~V~~L~~g~~Y~FRV~A~N~~G~s~ 92 (573)
T 3uto_A 66 --YTTIEGLRAGKQYEFRIIAENKHGQSK 92 (573)
T ss_dssp --EEEECCCCTTCEEEEEEEEEETTEECC
T ss_pred --EEEeCCCCCCCcEeEEEEEEcCceEcC
Confidence 357899999999999997633 35553
No 185
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=82.50 E-value=5.8 Score=36.70 Aligned_cols=20 Identities=10% Similarity=0.061 Sum_probs=17.6
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..++|+||+|++.|.++|..
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 165 TSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred eEEEeCCCCCCCEEEEEEEE
Confidence 36789999999999999975
No 186
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=82.04 E-value=2.6 Score=45.63 Aligned_cols=80 Identities=15% Similarity=0.154 Sum_probs=54.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCc----------------HHHH
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGF----------------LVEW 388 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~----------------~~~w 388 (639)
.++++++.+.......+- ..+-+..+++.+.+. +||.+|++|.+++.... ...+
T Consensus 146 ~~l~ivvAsGPyT~sdnl---------~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~ 216 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNF---------SLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTL 216 (460)
T ss_dssp SCEEEEEEESCCSCSSCC---------CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSH
T ss_pred CCcEEEEEeCCccCCCcc---------ChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCH
Confidence 578999999987654321 235678888887775 89999999999976521 1223
Q ss_pred HHHH-Hhhhhh----hcCCceEEecCCCCcC
Q 006591 389 DFFL-HQITPV----ASRVSYMTAIGNHERD 414 (639)
Q Consensus 389 d~f~-~~l~~l----~~~vP~~~v~GNHD~~ 414 (639)
++++ ..+.++ ...+.++.+||+||..
T Consensus 217 ~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 217 DELFLKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHHHHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHHHHHHHHHHhccCCCEEEEeCCccccc
Confidence 4333 333333 3567799999999974
No 187
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=81.80 E-value=6.2 Score=38.75 Aligned_cols=85 Identities=19% Similarity=0.342 Sum_probs=52.1
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC---cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP---QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~---~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
|..|.-+++.... ...+.|.|....... -.|+|...+...+... .. . .....
T Consensus 137 P~PP~nl~v~~~~--~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~------~~--------~---------~~~~~ 191 (247)
T 2erj_C 137 PWAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ------SV--------D---------YRHKF 191 (247)
T ss_dssp CCCCEEEEEEESS--SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEE------EE--------C---------SSCEE
T ss_pred eCCCCeEEEEECC--CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEE------ec--------C---------CceEE
Confidence 6778777776543 368999999765422 2688875433222111 00 0 01256
Q ss_pred EecCCCCCcEEEEEEccCC------C----ccceeeEEECCCC
Q 006591 290 VMTGLQPSSTVSYRYGSEA------V----DWSDKIQFRTPPA 322 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~------~----~~S~~~~F~T~P~ 322 (639)
.|.+|+|+++|..||.... . .||+...|.|.+.
T Consensus 192 ~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 192 SLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp EESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred EecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 7899999999999997532 1 3677788888643
No 188
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=81.50 E-value=5.9 Score=37.17 Aligned_cols=83 Identities=19% Similarity=0.342 Sum_probs=50.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
|..|.-+++.... ...+.|+|...... .-.|+|...+...+... .. . .....
T Consensus 99 P~pP~~l~~~~~~--~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~------~~--------~---------~~~~~ 153 (199)
T 2b5i_C 99 PWAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ------SV--------D---------YRHKF 153 (199)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE------EE--------C---------SSCEE
T ss_pred cCCCcEEEEEECC--CCCEEEEECCCCCCCceEEEEEEeecCCcccEEE------ec--------c---------CceEE
Confidence 6788777777654 26899999976532 23688875433222110 00 0 11356
Q ss_pred EecCCCCCcEEEEEEccCC-------C---ccceeeEEECC
Q 006591 290 VMTGLQPSSTVSYRYGSEA-------V---DWSDKIQFRTP 320 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~-------~---~~S~~~~F~T~ 320 (639)
.|.+|+|+++|..||.... . .||....|.|.
T Consensus 154 ~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 154 SLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp EECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred EecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 7899999999999997532 1 36666777764
No 189
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=81.45 E-value=5.6 Score=38.32 Aligned_cols=33 Identities=3% Similarity=0.050 Sum_probs=21.0
Q ss_pred EecCCCCCcEEEEEEccCC-C---ccceeeEEECCCC
Q 006591 290 VMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~ 322 (639)
.+.+|.|++.|.+||..-+ . .+|+...+++++.
T Consensus 166 ~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~~ 202 (232)
T 4go6_B 166 AHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSK 202 (232)
T ss_dssp BCBEESSSEEEEEEEEEECSSCBCCCEEEEEECC---
T ss_pred eeecCccCCceEEEEEEECCCcCCCCcccEEeccCCC
Confidence 3568999999999997522 2 3566666665543
No 190
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=81.22 E-value=7.1 Score=37.92 Aligned_cols=67 Identities=12% Similarity=0.168 Sum_probs=38.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEec--CCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGD--DGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~--~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|.-.+..-. +.+++.|+|.......+.-.|.. .++. .. +- +.. + ...+
T Consensus 151 p~Pp~NL~At~V--T~tSVtLsW~aP~~~~GI~gY~ly~~g~~-v~---~v------------~~~-------~--tsyt 203 (238)
T 2w1n_A 151 VNPVRDFKASEI--NKKNVTVTWTEPETTEGLEGYILYKDGKK-VA---EI------------GKD-------E--TSYT 203 (238)
T ss_dssp CCCCEEEEEEEE--CSSCEEEEEECCSCCTTEEEEEEEETTEE-EE---EE------------ETT-------C--CEEE
T ss_pred cCCCCceEEEEc--cCCeEEEEecCCCCCCCceeEEEEeCCce-eE---Ee------------ecc-------c--eEEE
Confidence 445544444433 46899999997766544334431 1211 00 00 110 1 1357
Q ss_pred ecCCCCCcEEEEEEcc
Q 006591 291 MTGLQPSSTVSYRYGS 306 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~ 306 (639)
++||+|+|.|.|+|..
T Consensus 204 ~~gLk~~TeYsF~V~A 219 (238)
T 2w1n_A 204 FKKLNRHTIYNFKIAA 219 (238)
T ss_dssp ECSCCTTCEEEEEEEE
T ss_pred ecCCCCCCEEEEEEEE
Confidence 8999999999999964
No 191
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=80.04 E-value=6.6 Score=36.34 Aligned_cols=34 Identities=3% Similarity=-0.088 Sum_probs=23.9
Q ss_pred EEEEecCCCCCcEEEEEEccCC-C---c-cceeeEEECC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA-V---D-WSDKIQFRTP 320 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~-~---~-~S~~~~F~T~ 320 (639)
...+|++|+|++.|.++|..-+ . . +|....++|.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 164 NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred cEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 3568899999999999997521 1 2 3455666664
No 192
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=78.83 E-value=19 Score=36.53 Aligned_cols=86 Identities=21% Similarity=0.279 Sum_probs=49.8
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCC--CCCc----EEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGD--KEPQ----QVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~--~~~~----~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+... ..+++.|.|.... ...+ .|+|...+...+... .. .+..
T Consensus 196 P~~P~~~~~~~~--~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~---~~-------------------~~~~ 251 (389)
T 2jll_A 196 PSSPYGVKIIEL--SQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIV---RS-------------------HGVQ 251 (389)
T ss_dssp CCCCEEEEEEEE--CSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEE---EC-------------------STTC
T ss_pred CCCCcceEEeec--cCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEe---ec-------------------cCCc
Confidence 556655554433 3478999998432 1222 566665443222100 00 0112
Q ss_pred EEEEecCCCCCcEEEEEEccC-C---CccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE-A---VDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~-~---~~~S~~~~F~T~P~ 322 (639)
....|.+|+|++.|.|+|... . ..+|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 357889999999999999642 1 23566778888654
No 193
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=78.75 E-value=5.3 Score=37.89 Aligned_cols=90 Identities=12% Similarity=0.159 Sum_probs=46.3
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
-|..|.-+.+.... .....|+|.....+ .-+|+|...+.. +. ....... ..
T Consensus 97 kp~PP~nl~~~~~~--~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~-~~-~~~~~~~-----------------~~ 155 (207)
T 1iar_B 97 KPRAPGNLTVHTNV--SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDP-AD-FRIYNVT-----------------YL 155 (207)
T ss_dssp CCCCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSC-SC-EEEEEEC-----------------SS
T ss_pred ccCCCCCeEEEEcc--CCCEEEEECCCCCccccccccEEEEEEEccCCCc-hh-heeeeee-----------------cC
Confidence 37788777776432 35799999976432 237788754432 11 1011000 01
Q ss_pred ceEEEEEecCCCCCcEEEEEEccCC----C---ccceeeEEECCCC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSEA----V---DWSDKIQFRTPPA 322 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~~----~---~~S~~~~F~T~P~ 322 (639)
+......+.+|.||++|.-||.... + .||....|+|.++
T Consensus 156 ~~~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 156 EPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CCEEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CcEEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 2345566789999999999998532 1 4778899999754
No 194
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=75.94 E-value=58 Score=31.38 Aligned_cols=60 Identities=12% Similarity=0.128 Sum_probs=35.2
Q ss_pred CceEEEEEeCCC-C-CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEcc
Q 006591 229 TSMRLTWVSGDK-E-PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 229 ~sm~v~W~T~~~-~-~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
+++.|+|.-... . .-.|+|...+..... ...+.... ........+++|+|++.|.++|..
T Consensus 115 ~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~~L~p~t~Y~~~V~A 176 (290)
T 3l5i_A 115 NMLWVEWTTPRESVKKYILEWCVLSDKAPC-ITDWQQED-----------------GTVHRTYLRGNLAESKCYLITVTP 176 (290)
T ss_dssp TEEEEEEECCSSCCCEEEEEEEEECSSSCC-CCEEEEEE-----------------TTCSEEECCSCCCTTCEEEEEEEE
T ss_pred CeEEEEEeCCCCCCCcEEEEEEECCCCCCC-CcCeEEcc-----------------CCCcceEEecCcCCccEEEEEEEE
Confidence 699999996544 2 237777754332110 00111100 012245678999999999999974
No 195
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=75.58 E-value=7.4 Score=33.18 Aligned_cols=33 Identities=12% Similarity=0.039 Sum_probs=25.0
Q ss_pred EEEecCCCCCcEEEEEEcc----CCCccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGS----EAVDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~----~~~~~S~~~~F~T~P 321 (639)
.+++. |+|+|.|.+||.. +...+|+...|+|..
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 45667 9999999999964 222478888899864
No 196
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=74.45 E-value=13 Score=41.15 Aligned_cols=43 Identities=7% Similarity=0.162 Sum_probs=30.2
Q ss_pred EEEEecCCCCCcEEEEEEccCC-C------ccceeeEEECCCCCCCCceEE
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA-V------DWSDKIQFRTPPAGGSDEMKF 330 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~-~------~~S~~~~F~T~P~~g~~~~~f 330 (639)
..++|++|+|+|.|.++|..-+ . .++....++|.|... ...++
T Consensus 400 ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~P-s~~~~ 449 (536)
T 3fl7_A 400 TSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEP-PKVRL 449 (536)
T ss_dssp SEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCC-CEEEE
T ss_pred ceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCC-CCCce
Confidence 4678999999999999996421 1 245677888876542 34554
No 197
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=73.60 E-value=10 Score=39.86 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=24.3
Q ss_pred EEEecCCCCCcEEEEEEccC------CC---ccceeeEEEC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE------AV---DWSDKIQFRT 319 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~------~~---~~S~~~~F~T 319 (639)
.+.|.+|+|||+|..||... .. .||....|+|
T Consensus 378 ~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 378 SMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp EEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred EEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 67899999999999998742 11 3667777765
No 198
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=72.84 E-value=5.2 Score=47.06 Aligned_cols=36 Identities=22% Similarity=0.146 Sum_probs=28.3
Q ss_pred EEEEecCCCCCcEEEEEEcc-C---C-----CccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGS-E---A-----VDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~-~---~-----~~~S~~~~F~T~P~ 322 (639)
...+|++|+|+|.|.|||.. - + ..+|+...|+|.+.
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~ 593 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDAT 593 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCC
Confidence 45789999999999999976 2 1 24778888999654
No 199
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=66.63 E-value=17 Score=36.40 Aligned_cols=34 Identities=15% Similarity=0.102 Sum_probs=26.2
Q ss_pred EEEecCCCCCcEEEEEEccC------CCccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE------AVDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~------~~~~S~~~~F~T~P 321 (639)
.++|.+|+|+|.|..+|..- ...+|+...++|..
T Consensus 160 ~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 160 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp EEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred eEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 57899999999999998632 12478888888853
No 200
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=65.19 E-value=2.4 Score=46.61 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=25.9
Q ss_pred EEEecCCCCCcEEEEEEccC---CCccceeeEEECC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE---AVDWSDKIQFRTP 320 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~---~~~~S~~~~F~T~ 320 (639)
..+|+||+||+.|.++|..- +..+|...+|+|+
T Consensus 553 ~~~~~~L~p~t~Y~~~V~A~n~~G~~~S~~~~~~T~ 588 (589)
T 3l5h_A 553 EYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTP 588 (589)
T ss_dssp BCCBCSCCSSCCEECCEEEEETTEEEECCCCEECCC
T ss_pred EEEecCCCCCCEEEEEEEEEeCCCCCCCCCeEEecC
Confidence 46799999999999998642 2347788888885
No 201
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=65.07 E-value=21 Score=40.35 Aligned_cols=32 Identities=19% Similarity=0.375 Sum_probs=22.6
Q ss_pred EEEecCCCCCcEEEEEEccCC-C---cc-ceeeEEEC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-V---DW-SDKIQFRT 319 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~---~~-S~~~~F~T 319 (639)
.++|++|+|+|.|.|||..-+ . ++ +....|+|
T Consensus 224 ~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t 260 (680)
T 1zlg_A 224 RVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRS 260 (680)
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEc
Confidence 467999999999999996422 1 22 34456776
No 202
>1noa_A Neocarzinostatin; antibacterial protein; 1.50A {Streptomyces carzinostaticus} SCOP: b.1.7.1 PDB: 1nco_A 1o5p_A* 1j5h_A 1j5i_A* 2g0k_A 2g0l_A* 2cbq_A* 2cbo_A* 2cbm_A* 2cbt_A*
Probab=64.43 E-value=7.4 Score=33.48 Aligned_cols=34 Identities=29% Similarity=0.276 Sum_probs=27.5
Q ss_pred EEEecCCCCCCCCCEEEEEEeccCCCCCCCEEEEE
Q 006591 72 NISVSKSSDLSDEEFVTVTVTGVLHPSRHDWVAMI 106 (639)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 106 (639)
.|+|+|+.-|.|||.|+|+.+|. .|...=.++.-
T Consensus 4 ~isvsPatgL~DGq~VtV~~tGl-~p~~~y~v~~C 37 (113)
T 1noa_A 4 TATVTPSSGLSDGTVVKVAGAGL-QAGTAYDVGQC 37 (113)
T ss_dssp EEEEESCSSCCTTCEEEEEEESC-CTTCEEEEEEE
T ss_pred cEEecCCCCCCCCCEEEEEEEcc-CCCCeEEEEEc
Confidence 58899999999999999999996 67655455443
No 203
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=63.96 E-value=5.7 Score=38.29 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=23.9
Q ss_pred EEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P 321 (639)
..++++|+|+|.|.+||..-+ . .+|....++|.+
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 467899999999999997522 2 356677777754
No 204
>2mcm_A Macromomycin; apoprotein; 1.50A {Streptomyces macromomyceticus} SCOP: b.1.7.1
Probab=63.66 E-value=6.9 Score=33.64 Aligned_cols=34 Identities=29% Similarity=0.438 Sum_probs=27.6
Q ss_pred EEEecCCCCCCCCCEEEEEEeccCCCCCCCEEEEE
Q 006591 72 NISVSKSSDLSDEEFVTVTVTGVLHPSRHDWVAMI 106 (639)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 106 (639)
.|+|+|+.-|.|||.|+|+.+|. .|...=.++.-
T Consensus 3 ~isvsPatgL~DGq~VtV~~tGl-~p~~~y~v~~C 36 (112)
T 2mcm_A 3 GVTVTPATGLSNGQTVTVSATGL-TPGTVYHVGQC 36 (112)
T ss_dssp EEEEESCSSBCTTEEEEEEEESC-CTTCEEEEEEE
T ss_pred ceEecCCCCCCCCCEEEEEEEcc-CCCCeEEEEEc
Confidence 58899999999999999999996 67665455443
No 205
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=61.84 E-value=1.7 Score=45.60 Aligned_cols=83 Identities=16% Similarity=0.294 Sum_probs=26.6
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC------cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP------QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~------~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+.+.... .+++.|+|....... -+|+|...+. .+.... ..
T Consensus 237 ~p~pP~~l~v~~~~--~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~-------~w~~~~--------~~---------- 289 (380)
T 3lb6_C 237 KPLPPVYLTFTRES--SCEIKLKWSIPLGPIPARCFDYEIEIREDDT-------TLVTAT--------VE---------- 289 (380)
T ss_dssp CCCCCEEEEEC---------CEEEECCSSSCCSTTEEEEECC---------------CCE--------ES----------
T ss_pred cCCCCceEEEEEcC--CCeEEEEECCCCCCCCcceEEEEEEEEeCCC-------CceEec--------cc----------
Confidence 36677666666532 468999999754321 2555553211 111000 00
Q ss_pred EEEEEecC-CCCCcEEEEEEccC------C----CccceeeEEECCCC
Q 006591 286 IHTAVMTG-LQPSSTVSYRYGSE------A----VDWSDKIQFRTPPA 322 (639)
Q Consensus 286 ~h~a~l~g-L~P~t~Y~Yrvg~~------~----~~~S~~~~F~T~P~ 322 (639)
....|.+ |+|+|+|..||... . ..||+...|+|++.
T Consensus 290 -~~~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~ 336 (380)
T 3lb6_C 290 -NETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDL 336 (380)
T ss_dssp -SSCC------------CCEEEEECTTTCSSCCCCCCCCC--------
T ss_pred -ceEEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCC
Confidence 0245778 99999999998642 1 24678888999754
No 206
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=58.88 E-value=33 Score=38.41 Aligned_cols=99 Identities=15% Similarity=0.261 Sum_probs=51.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEec--CCCcccceee-------------eeeccccccCCCCCCCCC
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGD--DGKTQTSEVS-------------TFTQENMCSSALPSPAKD 277 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~--~g~~~~~~~~-------------t~~~~~~~~~~~~~pa~~ 277 (639)
|..|..+..--..-+.+++.|.|.-.+.......|.. .|........ .|-.++ ++
T Consensus 35 ~~~p~~~~~~t~~~~~~si~l~~~~p~~~~~~~~y~vy~ng~~v~~~~~~~~~~~~~~~~~~~~~~~~--------~~-- 104 (608)
T 2uvf_A 35 LDAPQQLQVPTLAYDESSIVLVWKAPEDTRKIVDYQIFSAGKLLGKASDNNDNFSPAKPYIDHFYVND--------KD-- 104 (608)
T ss_dssp -CCCEEEECCTTCBCSSCEEEEEECCSCCTTEEEEEEEETTEEEEEHHHHHHHHCSSHHHHHHHHHTC--------GG--
T ss_pred CCCCCceEeeecccCCcEEEEEEeCCccccccccEEEEECCEEeEeeccccccccccccccccccccc--------cc--
Confidence 5577555542112246899999997766555555542 2321110000 011111 00
Q ss_pred CCccCCceEEEEEecCCCCCcEEEEEEcc---CCC--ccceeeEEECCCC
Q 006591 278 FGWHNPGYIHTAVMTGLQPSSTVSYRYGS---EAV--DWSDKIQFRTPPA 322 (639)
Q Consensus 278 ~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~---~~~--~~S~~~~F~T~P~ 322 (639)
+++..-..|...+++|+|+|+|.|+|.. ++. .-++....+|.+.
T Consensus 105 -~~~~~~~~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 105 -NFQHKIVMQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp -GCSCCCCCCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred -cccceeeeeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 1111113567889999999999999965 111 1244555666543
No 207
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=54.65 E-value=37 Score=31.94 Aligned_cols=83 Identities=8% Similarity=0.011 Sum_probs=47.2
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCC-CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDK-EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~-~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
..|. +.+.. ..+++.|.|.-... -.-.|.|++.+............ .-..++|.
T Consensus 111 ~PP~-v~v~~---~~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~~~~~~---------------------~~~~~~i~ 165 (206)
T 4doh_B 111 TRPG-MEITK---DGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVKMVRS---------------------GGIPVHLE 165 (206)
T ss_dssp CCCC-EEEEE---ETTEEEEEECCCCTTCEEEEEEEESSSSCCCEEEEECC---------------------SSSEEEEE
T ss_pred CCCe-EEEEe---CCCEEEEEecCCCCcEEEEEEEEEcCCCceeEEeEEcc---------------------CCeEEEEe
Confidence 3454 56653 35799999974321 23377787654432110010000 01257899
Q ss_pred CCCCCcEEEEEEccC------CCccceeeEEECCC
Q 006591 293 GLQPSSTVSYRYGSE------AVDWSDKIQFRTPP 321 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~~------~~~~S~~~~F~T~P 321 (639)
+|+|+|.|..+|..- ...+|...-|+|..
T Consensus 166 ~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C~~t~~ 200 (206)
T 4doh_B 166 TMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQG 200 (206)
T ss_dssp ECCSSSCEEEEEEEEEGGGTEECCCCCCEEECC--
T ss_pred CCCCCCcEEEEEEEEecCCCCCCCCCCCEeEEccc
Confidence 999999999998631 12467777788753
No 208
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=54.25 E-value=54 Score=34.07 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=26.0
Q ss_pred EEEecCCCCCcEEEEEEccCC------CccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA------VDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~------~~~S~~~~F~T~P 321 (639)
..+|++|+|+|.|..+|..-+ ..+|+...++|..
T Consensus 164 ~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 164 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp EEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred EEEEcCCCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 578999999999999997532 2367777788753
No 209
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=53.99 E-value=10 Score=36.12 Aligned_cols=16 Identities=25% Similarity=0.466 Sum_probs=13.2
Q ss_pred hCCCeEEEeCcccccc
Q 006591 526 KNKVDLVLFGHVHNYE 541 (639)
Q Consensus 526 ~y~VdlvlsGH~H~Ye 541 (639)
..+++++++||+|...
T Consensus 176 ~~~~~~vv~GHth~~~ 191 (221)
T 1g5b_A 176 IKGADTFIFGHTPAVK 191 (221)
T ss_dssp CBTSSEEEECSSCCSS
T ss_pred ccCCCEEEECCCCCcc
Confidence 3578999999999854
No 210
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=51.84 E-value=15 Score=35.26 Aligned_cols=36 Identities=28% Similarity=0.143 Sum_probs=28.1
Q ss_pred EEEecCCCCCcEEEEEEccC------CCccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE------AVDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~------~~~~S~~~~F~T~P~~ 323 (639)
.++|.+|+|+|.|..+|..- ...||+...|+|.+..
T Consensus 174 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d~ 215 (221)
T 4doh_R 174 TLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKDQ 215 (221)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC-
T ss_pred EEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCCc
Confidence 57899999999999998632 2358888999997653
No 211
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=50.62 E-value=15 Score=34.10 Aligned_cols=70 Identities=13% Similarity=0.101 Sum_probs=41.6
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHT 288 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~ 288 (639)
|..|..+...... .++++|+|...... .-.|+|...+.. ...|... . +....
T Consensus 8 P~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~----------~~~~~~~---~---------~~~~~ 63 (215)
T 1bqu_A 8 PEKPKNLSCIVNE--GKKMRCEWDGGRETHLETNFTLKSEWATHK----------FADCKAK---R---------DTPTS 63 (215)
T ss_dssp CCCCEEEEEEEET--TSCCEEEEECCSCCSSCCEEEEEEEETTEE----------CCCEECC---S---------SCTTE
T ss_pred CCCCEeeEeEECC--CCcEEEEcCCCCCCCCCceEEEEEEEcCCC----------ccccccc---c---------CCcce
Confidence 5677766655533 47899999965432 225666532210 0112100 0 11235
Q ss_pred EEecCC-CCCcEEEEEEcc
Q 006591 289 AVMTGL-QPSSTVSYRYGS 306 (639)
Q Consensus 289 a~l~gL-~P~t~Y~Yrvg~ 306 (639)
.+|++| +|++.|.++|..
T Consensus 64 ~~i~~L~~~~t~Y~~~V~A 82 (215)
T 1bqu_A 64 CTVDYSTVYFVNIEVWVEA 82 (215)
T ss_dssp EECSSCCCTTSCEEEEEEE
T ss_pred EEEcCCccccccEEEEEEE
Confidence 789999 999999999975
No 212
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=49.02 E-value=5.6 Score=32.17 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=18.4
Q ss_pred ceEEEEEecCCCCCcEEEEEEcc
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
|-.+.-+|.||+||.+|.=++-+
T Consensus 35 gh~nSYtIsGLkPGvtYegQLis 57 (89)
T 1q38_A 35 GHLNSYTIKGLKPGVVYEGQLIS 57 (89)
T ss_dssp SSSSCCCCCCCCTTCCEEEEEEE
T ss_pred CccceEEEeccCCCcEEEEEEEe
Confidence 44556689999999999988765
No 213
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=48.40 E-value=73 Score=30.65 Aligned_cols=19 Identities=11% Similarity=0.113 Sum_probs=17.0
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+|.+|+|++.|.|+|..
T Consensus 255 ~~~i~~l~~~~~y~~~~~A 273 (305)
T 2nzi_A 255 RYTVINLFGKTSYQFRVIA 273 (305)
T ss_dssp EEEECSCCSSCEEEEEEEE
T ss_pred eEEecCCCCCCeEEEEEEE
Confidence 5689999999999999975
No 214
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=48.28 E-value=1.6e+02 Score=33.01 Aligned_cols=35 Identities=14% Similarity=0.015 Sum_probs=26.0
Q ss_pred EEEecCCCCCcEEEEEEcc---CCC---ccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGS---EAV---DWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~---~~~---~~S~~~~F~T~P~ 322 (639)
..+|++|+|++.|.|+|.. +.. .+|....++|.+.
T Consensus 317 ~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~ 357 (731)
T 2v5y_A 317 SYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCA 357 (731)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCC
T ss_pred eEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCC
Confidence 5689999999999999863 222 3566778888653
No 215
>1akp_A Apokedarcidin; antibiotic chromoprotein; NMR {Actinomycete atcc 53650} SCOP: b.1.7.1
Probab=46.89 E-value=7.7 Score=33.42 Aligned_cols=45 Identities=24% Similarity=0.297 Sum_probs=31.6
Q ss_pred EEEecCCCCCCCCCEEEEEEeccCCCCCCCEEEEEcCCCCCCCCCC
Q 006591 72 NISVSKSSDLSDEEFVTVTVTGVLHPSRHDWVAMISPAHSDVSSCP 117 (639)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~ 117 (639)
.|+|+|+.-|.|||.|+|+.+|. .|...=.++.-.......-.|-
T Consensus 4 ~isvsPatgL~DGqtVtVs~tGl-~p~~~y~v~qCa~~~~g~~~C~ 48 (114)
T 1akp_A 4 AVSVSPATGLADGATVTVSASGF-ATSTSATALQCAILADGRGACN 48 (114)
T ss_dssp EEEESSCEEECTTCBCCEEEECC-SSCSCBBCCEEEECSSCCCEEC
T ss_pred ceEecCCCCCCCCCEEEEEEEcc-CCCCeEEEEEccccCCCCcccc
Confidence 68899999999999999999996 6765555544433322334443
No 216
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=42.30 E-value=21 Score=33.35 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=27.6
Q ss_pred EEEecCCCCCcEEEEEEccC------CCccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE------AVDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~------~~~~S~~~~F~T~P~ 322 (639)
.++|++|+|+|.|..+|..- ...||+...|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 47899999999999998632 124788888998764
No 217
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=40.35 E-value=25 Score=34.70 Aligned_cols=70 Identities=13% Similarity=0.100 Sum_probs=41.5
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHT 288 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~ 288 (639)
|..|..+...... .++++++|....... -.|+|...+.. ...|... ++....
T Consensus 104 P~~P~~l~~~~~~--~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~----------~~~~~~~------------~~~~~~ 159 (303)
T 1i1r_A 104 PEKPKNLSCIVNE--GKKMRCEWDGGRETHLETNFTLKSEWATHK----------FADCKAK------------RDTPTS 159 (303)
T ss_dssp CCCCEEEEEEEET--TSCCEEEEECCSCCSSCCEEEEEEEETTEE----------CCCEECC------------SSCTTE
T ss_pred CCCCeeeEEEECC--CCcEEEEccCCCCCCCCcCEEEEEEecCCC----------CccCCCc------------CCCceE
Confidence 5677766655433 378999999654321 25566532210 0112100 111236
Q ss_pred EEecCC-CCCcEEEEEEcc
Q 006591 289 AVMTGL-QPSSTVSYRYGS 306 (639)
Q Consensus 289 a~l~gL-~P~t~Y~Yrvg~ 306 (639)
.++++| .|++.|.++|..
T Consensus 160 ~~i~~L~~p~t~Y~f~V~A 178 (303)
T 1i1r_A 160 CTVDYSTVYFVNIEVWVEA 178 (303)
T ss_dssp EECSSCCCTTSCEEEEEEE
T ss_pred EEECCcCcccccEEEEEEE
Confidence 789999 999999999975
No 218
>1acx_A Actinoxanthin; antibacterial protein; 2.00A {Streptomyces globisporus} SCOP: b.1.7.1 PDB: 1hzk_A 1hzl_A* 1j48_A
Probab=31.59 E-value=33 Score=29.13 Aligned_cols=20 Identities=45% Similarity=0.473 Sum_probs=18.0
Q ss_pred EEEecCCCCCCCCCEEEEEE
Q 006591 72 NISVSKSSDLSDEEFVTVTV 91 (639)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~ 91 (639)
.|+|+|+.-|.||+.|+|+-
T Consensus 3 aisvsPstGLsDgqtVtVs~ 22 (108)
T 1acx_A 3 AFSVSPASGASDGQSVSVSV 22 (108)
T ss_dssp EEEEECCSSCCSSCEEEEEE
T ss_pred ceEecCCCCCCCCCEEEEEE
Confidence 58899999999999999876
No 219
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=30.55 E-value=1.2e+02 Score=27.74 Aligned_cols=87 Identities=15% Similarity=0.117 Sum_probs=48.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHT 288 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~ 288 (639)
|..|.-+.....+ .++|+++|..+... .-.|.|...+...+ ..|... ... ......
T Consensus 4 P~~P~nl~c~~~~--~~~~~c~W~p~~~~~~~~~Y~l~y~~~~~~~~---------~~c~~~-----~~~----~~~~c~ 63 (210)
T 3n06_B 4 PGKPEIFKCRSPN--KETFTCWWRPGTDGGLPTNYSLTYHREGETLM---------HECPDY-----ITG----GPNSCH 63 (210)
T ss_dssp CCCCEEEEEEBSS--SSCEEEEEECCSSSCCCSEEEEEEEETTCCCC---------EECSCS-----STT----CTTEEE
T ss_pred CCCCeEeEEEeCC--CCeEEEEECCCCCCCCCceEEEEEEECCCCcc---------ccCCCC-----CCC----CCeEEE
Confidence 5677666655433 58999999966532 23666664332111 123211 000 123456
Q ss_pred EEecCCCCCcEEEEEEccCC-Cc--cceeeEEEC
Q 006591 289 AVMTGLQPSSTVSYRYGSEA-VD--WSDKIQFRT 319 (639)
Q Consensus 289 a~l~gL~P~t~Y~Yrvg~~~-~~--~S~~~~F~T 319 (639)
+.+.+|.|.+.|..+|...+ .| .|....|.+
T Consensus 64 ~~~~~l~~~~~Y~~~V~A~N~~G~~~s~~~~~~~ 97 (210)
T 3n06_B 64 FGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDV 97 (210)
T ss_dssp ECGGGCCSSSCEEEEEEEEETTEEEECCCEEECG
T ss_pred eCCCCcccceeEEEEEEEEcCCCCeeCCcEEEch
Confidence 66788999999999997532 22 344556654
No 220
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=26.15 E-value=1.3e+02 Score=30.91 Aligned_cols=18 Identities=6% Similarity=-0.143 Sum_probs=15.1
Q ss_pred EEecCCCCCcEEEEEEcc
Q 006591 289 AVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 289 a~l~gL~P~t~Y~Yrvg~ 306 (639)
-+=++|.+||+|+|.|..
T Consensus 73 ytDt~~~~GttYyYwVk~ 90 (344)
T 3b4n_A 73 FKDADTNSGLNYWYWVDV 90 (344)
T ss_dssp EEECCCCTTCCCEEEEEE
T ss_pred EEecCcCCCcEEEEEEEE
Confidence 345899999999999975
No 221
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=24.80 E-value=2.8e+02 Score=25.00 Aligned_cols=92 Identities=14% Similarity=0.025 Sum_probs=47.8
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHT 288 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~ 288 (639)
|..|..+...... ..++|++.|..+.... -.|+|...+..-....... ..|- . .. ......
T Consensus 5 P~~P~~l~c~~~~-~~~~~~~~W~p~~~~~~~~~Y~l~~~~~~~~~~~~~~~~---~~~~------~-~~----~~~~~~ 69 (215)
T 1cd9_B 5 PASPSNLSCLMHL-TTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTI---PDCV------A-KK----RQNNCS 69 (215)
T ss_dssp CCCCEEEEEEEET-TTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEE---EEEE------C-CT----TCCEEE
T ss_pred CCCCeeeeeecCC-CcccEEEEecCCCCCCCceeEEEEEEecCCccccccccc---ccCC------C-CC----CCcEEE
Confidence 5567666555432 3579999999654322 2556653221100000000 0111 0 00 113456
Q ss_pred EEecCCCCCcEEEEEEccCC-Cc--cceeeEEEC
Q 006591 289 AVMTGLQPSSTVSYRYGSEA-VD--WSDKIQFRT 319 (639)
Q Consensus 289 a~l~gL~P~t~Y~Yrvg~~~-~~--~S~~~~F~T 319 (639)
+.+.+|.|.+.|.++|...+ .+ .|....|.+
T Consensus 70 ~~~~~L~~~~~Y~~~V~A~N~~G~~~s~~~~~~~ 103 (215)
T 1cd9_B 70 IPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDP 103 (215)
T ss_dssp EEGGGCCTTSCEEEEEEEEETTEEEECCCEEECG
T ss_pred ECCcccccceEEEEEEEEECCCCCccCccEEEch
Confidence 78899999999999996532 22 234455654
No 222
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=22.83 E-value=22 Score=41.72 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=27.3
Q ss_pred EEEecCCCCCcEEEEEEcc----CCCccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGS----EAVDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~----~~~~~S~~~~F~T~P~~ 323 (639)
.++|++|+|| +|.+||.. +...||+...|+|++.+
T Consensus 852 ~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p 890 (897)
T 2dtg_E 852 GCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYL 890 (897)
T ss_dssp CCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC
T ss_pred cEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCC
Confidence 4589999999 69999864 22358899999998765
No 223
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=20.70 E-value=92 Score=30.90 Aligned_cols=84 Identities=15% Similarity=0.292 Sum_probs=42.0
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
.|.-+++...+ .++.|+|.-.... .-.|+|...+... +.....|... ......+.
T Consensus 6 ~P~nv~~~~~n---~~~iL~W~pp~~~~~~v~Y~V~y~~~~~~~------W~~~~~c~~~------------~~~~c~lt 64 (306)
T 3s98_A 6 SPQKVEVDIID---DNFILRWNRSDESVGNVTFSFDYQKTGMDN------WIKLSGCQNI------------TSTKCNFS 64 (306)
T ss_dssp --CCCEEEEET---TEEEEECC--------CEEEEEEEESSCSS------CEECTTCSSB------------SSSEEECC
T ss_pred CCcEeEEEEEC---CeEEEEEcCCCCCCCCeEEEEEEEECCCCC------cEECCCccCC------------CCCEEEcc
Confidence 56677777643 4689999865432 2367776443322 2222345311 01233444
Q ss_pred ecCCCCCcEEEEEEccCCCc---cceeeEEEC
Q 006591 291 MTGLQPSSTVSYRYGSEAVD---WSDKIQFRT 319 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~~~~---~S~~~~F~T 319 (639)
..+|.|.+.|..||...+.+ ||....|.+
T Consensus 65 ~~~l~~~~~Y~~rV~A~n~~~S~~s~~~~f~~ 96 (306)
T 3s98_A 65 SLKLNVYEEIKLRIRAEKENTSSWYEVDSFTP 96 (306)
T ss_dssp C---CTTSCEEEEEEEECSSCEEEEECCCBCH
T ss_pred ccccCCCCcEEEEEEEEeCCcCCCEeeeeEec
Confidence 45689999999999754432 444556753
Done!