BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006593
(639 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 164/252 (65%), Gaps = 5/252 (1%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSW--VD 69
+ YK D +EVAW ++ D + Q+ E LK L+ N+V+FY SW
Sbjct: 41 TVYKGLDTETTVEVAW--CELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTV 98
Query: 70 DKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
KK + ++TEL TSG L+ Y K+ K IKV+++W RQIL GL +LH+ PPIIHRDLK
Sbjct: 99 KGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 158
Query: 130 CDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMC 189
CDNIF+ G G VKIGDLGLA + A++VIGTPEF APE YEE+Y+E VD+Y+FG C
Sbjct: 159 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEKYDESVDVYAFGXC 218
Query: 190 ILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAK 248
LE T EYPYSEC+N AQI+++VTSG+KPAS KV P++K IE C+ ER S K
Sbjct: 219 XLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIK 278
Query: 249 DLLKDPFLQVEN 260
DLL F Q E
Sbjct: 279 DLLNHAFFQEET 290
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 113/204 (55%), Gaps = 14/204 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN----- 96
+ + EV ++K L+ N+V F + + ++++TE + G+L YR HK+
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMGA--VTQPPNLSIVTEYLSRGSL--YRLLHKSGAREQ 133
Query: 97 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAI--AMQ 154
+D + + A + G+ YLH+ NPPI+HR+LK N+ V+ + VK+ D GL+ A
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY-TVKVCDFGLSRLKAST 192
Query: 155 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
+++S GTPE+MAPE L +E NE D+YSFG+ + E+ T + P+ NPAQ+ V
Sbjct: 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAV 251
Query: 214 TSGIKPASLAKVNDPQIKGFIEKC 237
K + + +PQ+ IE C
Sbjct: 252 GFKCKRLEIPRNLNPQVAAIIEGC 275
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 111/204 (54%), Gaps = 14/204 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN----- 96
+ + EV ++K L+ N+V F + + ++++TE + G+L YR HK+
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMGA--VTQPPNLSIVTEYLSRGSL--YRLLHKSGAREQ 133
Query: 97 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAI--AMQ 154
+D + + A + G+ YLH+ NPPI+HRDLK N+ V+ + VK+ D GL+ A
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKY-TVKVCDFGLSRLKASX 192
Query: 155 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
++ GTPE+MAPE L +E NE D+YSFG+ + E+ T + P+ NPAQ+ V
Sbjct: 193 FLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAV 251
Query: 214 TSGIKPASLAKVNDPQIKGFIEKC 237
K + + +PQ+ IE C
Sbjct: 252 GFKCKRLEIPRNLNPQVAAIIEGC 275
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 122/231 (52%), Gaps = 15/231 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV--DI 99
Q L+ E+ L K LK N+V++ S+ ++ + + E G+L R K + +
Sbjct: 64 QPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQVPGGSLSALLRSKWGPLKDNE 121
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPT 157
+ I + +QIL GL YLH + I+HRD+K DN+ +N G +KI D G + +A P
Sbjct: 122 QTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179
Query: 158 ARSVIGTPEFMAPELYEE---EYNELVDIYSFGMCILEMVTFEYPYSECKNP-AQIFKKV 213
+ GT ++MAPE+ ++ Y + DI+S G I+EM T + P+ E P A +FK
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG 239
Query: 214 TSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKE 263
+ P + + + K FI KC P +R A DLL D FL+V ++K+
Sbjct: 240 MFKVHP-EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKK 289
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 127/239 (53%), Gaps = 14/239 (5%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
Y+A G+ VA +V+I D++ + E+ LLK L NV+K+Y S+++D +
Sbjct: 49 YRAACLLDGVPVALKKVQIFDLMDAKARADCI-KEIDLLKQLNHPNVIKYYASFIEDNE- 106
Query: 74 TVNMITELFTSGNL----RQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
+N++ EL +G+L + ++K+ + + + + + Q+ L ++HS ++HRD+K
Sbjct: 107 -LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIK 163
Query: 130 CDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSF 186
N+F+ G VK+GDLGL + + A S++GTP +M+PE ++E YN DI+S
Sbjct: 164 PANVFITAT-GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 222
Query: 187 GMCILEMVTFEYP-YSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVPASER 244
G + EM + P Y + N + KK+ P + +++ + C+ P E+
Sbjct: 223 GCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEK 281
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV--DI 99
Q L+ E+ L K LK N+V++ S+ ++ + + E G+L R K + +
Sbjct: 50 QPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQVPGGSLSALLRSKWGPLKDNE 107
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPT 157
+ I + +QIL GL YLH + I+HRD+K DN+ +N G +KI D G + +A P
Sbjct: 108 QTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 165
Query: 158 ARSVIGTPEFMAPELYEE---EYNELVDIYSFGMCILEMVTFEYPYSECKNP-AQIFKKV 213
+ GT ++MAPE+ ++ Y + DI+S G I+EM T + P+ E P A +FK
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG 225
Query: 214 TSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQ 257
+ P + + + K FI KC P +R A DLL D FL+
Sbjct: 226 MFKVHP-EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 45 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 104
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 195 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 251
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 252 VCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLV 308
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 219
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 367
Query: 220 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 256
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 368 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 404
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 45 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 104
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 118 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 174
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 175 VCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLV 231
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 219
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 290
Query: 220 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 256
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 291 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 327
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 45 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 104
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 73 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 129
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 130 VCLAVLQALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLV 186
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 219
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 187 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 245
Query: 220 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 256
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 246 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 282
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 45 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 104
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 75 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 131
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 132 VCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLV 188
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 219
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 189 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 247
Query: 220 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 256
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 248 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 284
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 45 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 104
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 68 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 124
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 125 VCLAVLQALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLV 181
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 219
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 182 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 240
Query: 220 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 256
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 241 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 45 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 104
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 64 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 120
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 121 VCLAVLQALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLV 177
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 219
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 236
Query: 220 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 256
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 237 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 273
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 127/251 (50%), Gaps = 16/251 (6%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDK 71
S YKA + G VA +V ++ DLQ++ E+ +++ +VVK+Y S+ K
Sbjct: 44 SVYKAIHKETGQIVAIKQVPVE------SDLQEIIKEISIMQQCDSPHVVKYYGSYF--K 95
Query: 72 KKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKC 130
+ ++ E +G++ R ++K + I + L GL YLH IHRD+K
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK--IHRDIKA 153
Query: 131 DNIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPELYEE-EYNELVDIYSFG 187
NI +N G K+ D G+A + A+ VIGTP +MAPE+ +E YN + DI+S G
Sbjct: 154 GNILLN-TEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLG 212
Query: 188 MCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVPASE-RLS 246
+ +EM + PY++ IF T+ ++ F+++CLV + E R +
Sbjct: 213 ITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRAT 272
Query: 247 AKDLLKDPFLQ 257
A LL+ PF++
Sbjct: 273 ATQLLQHPFVR 283
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 118/220 (53%), Gaps = 14/220 (6%)
Query: 45 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 104
L++EV +++ DNVV Y S++ + V M E G L H ++ + I
Sbjct: 89 LFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAT 145
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
+L L YLH N +IHRD+K D+I + + G +K+ D G ++ + P + ++
Sbjct: 146 VCLSVLRALSYLH--NQGVIHRDIKSDSILLTSD-GRIKLSDFGFCAQVSKEVPKRKXLV 202
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 219
GTP +MAPE+ Y VDI+S G+ ++EM+ E PY + P Q +++ + P
Sbjct: 203 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFN-EPPLQAMRRIRDSLPPRV 261
Query: 220 ASLAKVNDPQIKGFIEKCLV-PASERLSAKDLLKDPFLQV 258
L KV+ ++GF++ LV S+R +A++LL PFL++
Sbjct: 262 KDLHKVSS-VLRGFLDLMLVREPSQRATAQELLGHPFLKL 300
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 14/218 (6%)
Query: 45 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 104
L++EV +++ + NVV+ YKS++ ++ V M E G L + + ++ + I
Sbjct: 89 LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLM--EFLQGGALTDIVSQVR-LNEEQIAT 145
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
+L L YLH+ +IHRD+K D+I + + G VK+ D G I+ P + ++
Sbjct: 146 VCEAVLQALAYLHAQG--VIHRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPKRKXLV 202
Query: 163 GTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 219
GTP +MAPE+ Y VDI+S G+ ++EMV E PY +P Q K++ P
Sbjct: 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPPKL 261
Query: 220 ASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFL 256
+ KV+ P ++ F+E+ LV ER +A++LL PFL
Sbjct: 262 KNSHKVS-PVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL-RQYRKKHKNVDIKV 101
+++Y+E+ LLKSL N++K + + D KK ++TE + G L Q +HK D
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFED--KKYFYLVTEFYEGGELFEQIINRHK-FDECD 147
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHG--EVKIGDLGLAIAMQQP-TA 158
N +QIL G+ YLH HN I+HRD+K +NI + + +KI D GL+ +
Sbjct: 148 AANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 159 RSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
R +GT ++APE+ +++YNE D++S G+ I+ ++ YP +N I KKV G
Sbjct: 206 RDRLGTAYYIAPEVLKKKYNEKCDVWSCGV-IMYILLCGYPPFGGQNDQDIIKKVEKG 262
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 130/256 (50%), Gaps = 24/256 (9%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDK 71
+ Y A D G EVA ++ LQ + + +E+ +++ K+ N+V + S++
Sbjct: 35 TVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 90
Query: 72 KKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ V M E G+L + +D I R+ L L +LHS+ +IHRD+K D
Sbjct: 91 ELWVVM--EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSD 145
Query: 132 NIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY-EEEYNELVDIYSFGM 188
NI + G G VK+ D G I +Q +++GTP +MAPE+ + Y VDI+S G+
Sbjct: 146 NILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 189 CILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ-----IKGFIEKCL-VPAS 242
+EM+ E PY +NP + + + P ++ +P+ + F+ +CL +
Sbjct: 205 MAIEMIEGEPPYLN-ENPLRALYLIATNGTP----ELQNPEKLSAIFRDFLNRCLDMDVE 259
Query: 243 ERLSAKDLLKDPFLQV 258
+R SAK+LL+ FL++
Sbjct: 260 KRGSAKELLQHQFLKI 275
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 125/244 (51%), Gaps = 15/244 (6%)
Query: 20 FAGIEVAWSRV---KIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVN 76
F GI+ +V KI D+ + +++ + E+ +L V K+Y S++ D K +
Sbjct: 44 FKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK--LW 101
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+I E G+ + +D I R+IL GL YLHS IHRD+K N+ ++
Sbjct: 102 IIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLS 158
Query: 137 GNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEM 193
HGEVK+ D G+A + Q + +GTP +MAPE+ ++ Y+ DI+S G+ +E+
Sbjct: 159 -EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 217
Query: 194 VTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLK 252
E P+SE +P ++ + P + P +K F+E CL S R +AK+LLK
Sbjct: 218 ARGEPPHSEL-HPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPTAKELLK 275
Query: 253 DPFL 256
F+
Sbjct: 276 HKFI 279
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 24/256 (9%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDK 71
+ Y A D G EVA ++ LQ + + +E+ +++ K+ N+V + S++
Sbjct: 35 TVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 90
Query: 72 KKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ V M E G+L + +D I R+ L L +LHS+ +IHRD+K D
Sbjct: 91 ELWVVM--EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSD 145
Query: 132 NIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY-EEEYNELVDIYSFGM 188
NI + G G VK+ D G I +Q ++GTP +MAPE+ + Y VDI+S G+
Sbjct: 146 NILL-GMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 189 CILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ-----IKGFIEKCL-VPAS 242
+EM+ E PY +NP + + + P ++ +P+ + F+ +CL +
Sbjct: 205 MAIEMIEGEPPYLN-ENPLRALYLIATNGTP----ELQNPEKLSAIFRDFLNRCLDMDVE 259
Query: 243 ERLSAKDLLKDPFLQV 258
+R SAK+LL+ FL++
Sbjct: 260 KRGSAKELLQHQFLKI 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 120/231 (51%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
+KI D+ + +++ + E+ +L V K+Y S++ D K + +I E G+
Sbjct: 37 IKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALD 94
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ +D I R+IL GL YLHS IHRD+K N+ ++ HGEVK+ D G+
Sbjct: 95 LLEPGP-LDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGV 150
Query: 150 A--IAMQQPTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
A + Q + +GTP +MAPE+ ++ Y+ DI+S G+ +E+ E P+SE +P
Sbjct: 151 AGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HP 209
Query: 207 AQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
++ + P + P +K F+E CL S R +AK+LLK F+
Sbjct: 210 MKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 24/256 (9%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDK 71
+ Y A D G EVA ++ LQ + + +E+ +++ K+ N+V + S++
Sbjct: 35 TVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 90
Query: 72 KKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ V M E G+L + +D I R+ L L +LHS+ +IHRD+K D
Sbjct: 91 ELWVVM--EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSD 145
Query: 132 NIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY-EEEYNELVDIYSFGM 188
NI + G G VK+ D G I +Q ++GTP +MAPE+ + Y VDI+S G+
Sbjct: 146 NILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 189 CILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ-----IKGFIEKCL-VPAS 242
+EM+ E PY +NP + + + P ++ +P+ + F+ +CL +
Sbjct: 205 MAIEMIEGEPPYLN-ENPLRALYLIATNGTP----ELQNPEKLSAIFRDFLNRCLEMDVE 259
Query: 243 ERLSAKDLLKDPFLQV 258
+R SAK+LL+ FL++
Sbjct: 260 KRGSAKELLQHQFLKI 275
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 124/244 (50%), Gaps = 15/244 (6%)
Query: 20 FAGIEVAWSRV---KIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVN 76
F GI+ +V KI D+ + +++ + E+ +L V K+Y S++ D K +
Sbjct: 39 FKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK--LW 96
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+I E G+ + +D I R+IL GL YLHS IHRD+K N+ ++
Sbjct: 97 IIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLS 153
Query: 137 GNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEM 193
HGEVK+ D G+A + Q +GTP +MAPE+ ++ Y+ DI+S G+ +E+
Sbjct: 154 -EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 212
Query: 194 VTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLK 252
E P+SE +P ++ + P + P +K F+E CL S R +AK+LLK
Sbjct: 213 ARGEPPHSEL-HPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPTAKELLK 270
Query: 253 DPFL 256
F+
Sbjct: 271 HKFI 274
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIK 100
D + EV LLK L N++K ++ D + ++ EL+T G L K K
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEILED--SSSFYIVGELYTGGELFDEIIKRKRFSEH 121
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLAIAMQQPT- 157
+Q+ G+ Y+H HN I+HRDLK +NI + + +KI D GL+ QQ T
Sbjct: 122 DAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 158 ARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 217
+ IGT ++APE+ Y+E D++S G+ + +++ P+ KN I K+V +G
Sbjct: 180 MKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFY-GKNEYDILKRVETGK 238
Query: 218 KPASLAK---VNDPQIKGFIEKCLV-PASERLSAKDLLKDPFLQVENQKEPICDPL 269
L + ++D K I K L S R++A L+ P++Q + + P L
Sbjct: 239 YAFDLPQWRTISDDA-KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDL 293
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 24/256 (9%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDK 71
+ Y A D G EVA ++ LQ + + +E+ +++ K+ N+V + S++
Sbjct: 36 TVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 91
Query: 72 KKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ V M E G+L + +D I R+ L L +LHS+ +IHRD+K D
Sbjct: 92 ELWVVM--EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSD 146
Query: 132 NIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY-EEEYNELVDIYSFGM 188
NI + G G VK+ D G I +Q ++GTP +MAPE+ + Y VDI+S G+
Sbjct: 147 NILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 189 CILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ-----IKGFIEKCL-VPAS 242
+EM+ E PY +NP + + + P ++ +P+ + F+ +CL +
Sbjct: 206 MAIEMIEGEPPYLN-ENPLRALYLIATNGTP----ELQNPEKLSAIFRDFLNRCLEMDVE 260
Query: 243 ERLSAKDLLKDPFLQV 258
+R SAK+L++ FL++
Sbjct: 261 KRGSAKELIQHQFLKI 276
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 119/231 (51%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
+KI D+ + +++ + E+ +L V K+Y S++ D K + +I E G+
Sbjct: 37 IKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALD 94
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ +D I R+IL GL YLHS IHRD+K N+ ++ HGEVK+ D G+
Sbjct: 95 LLEPGP-LDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGV 150
Query: 150 A--IAMQQPTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
A + Q +GTP +MAPE+ ++ Y+ DI+S G+ +E+ E P+SE +P
Sbjct: 151 AGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HP 209
Query: 207 AQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
++ + P + P +K F+E CL S R +AK+LLK F+
Sbjct: 210 MKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 128/264 (48%), Gaps = 43/264 (16%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVD-----------DKKKTVNMITELFTSGNLRQY 90
L + SEV LL SL VV++Y +W++ KK T+ + E +G L Y
Sbjct: 46 LSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL--Y 103
Query: 91 RKKH-KNVDIKVIKNWA--RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 147
H +N++ + + W RQIL L Y+HS IIHRDLK NIF++ + VKIGD
Sbjct: 104 DLIHSENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRN-VKIGDF 160
Query: 148 GLAIAMQQP----------------TARSVIGTPEFMAPELYE--EEYNELVDIYSFGMC 189
GLA + + S IGT ++A E+ + YNE +D+YS G+
Sbjct: 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGII 220
Query: 190 ILEMVTFEYPYSECKNPAQIFKKVTS-GIKPASLAKVNDPQIKGFIEKCLVPA--SERLS 246
EM+ YP+S I KK+ S I+ N +++ I + L+ ++R
Sbjct: 221 FFEMI---YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
Query: 247 AKDLLKDPFLQVENQKEPICDPLK 270
A+ LL +L V++Q E I + LK
Sbjct: 278 ARTLLNSGWLPVKHQDEVIKEALK 301
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 126/262 (48%), Gaps = 39/262 (14%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDK---------KKTVNMITELFTSGNLRQYRK 92
L + SEV LL SL VV++Y +W++ + KK + ++ N Y
Sbjct: 46 LSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDL 105
Query: 93 KH-KNVDIKVIKNWA--RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
H +N++ + + W RQIL L Y+HS IIHRDLK NIF++ + VKIGD GL
Sbjct: 106 IHSENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRN-VKIGDFGL 162
Query: 150 AIAMQQP----------------TARSVIGTPEFMAPELYE--EEYNELVDIYSFGMCIL 191
A + + S IGT ++A E+ + YNE +D+YS G+
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Query: 192 EMVTFEYPYSECKNPAQIFKKVTS-GIKPASLAKVNDPQIKGFIEKCLVPA--SERLSAK 248
EM+ YP+S I KK+ S I+ N +++ I + L+ ++R A+
Sbjct: 223 EMI---YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGAR 279
Query: 249 DLLKDPFLQVENQKEPICDPLK 270
LL +L V++Q E I + LK
Sbjct: 280 TLLNSGWLPVKHQDEVIKEALK 301
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P ++ E+ +L +V FY ++ D + ++ M E G+L Q KK +
Sbjct: 64 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIP 121
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+++ + ++ GL YL + I+HRD+K NI VN + GE+K+ D G++ + A
Sbjct: 122 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 179
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 217
S +GT +M+PE L Y+ DI+S G+ ++EM YP IF+ + +
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIV 239
Query: 218 K---PASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFLQVENQKE 263
P + V + + F+ KCL+ PA ER K L+ F++ + +E
Sbjct: 240 NEPPPKLPSGVFSLEFQDFVNKCLIKNPA-ERADLKQLMVHAFIKRSDAEE 289
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 130/256 (50%), Gaps = 24/256 (9%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDK 71
+ Y A D G EVA ++ LQ + + +E+ +++ K+ N+V + S++
Sbjct: 36 TVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 91
Query: 72 KKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ V M E G+L + +D I R+ L L +LHS+ +IHR++K D
Sbjct: 92 ELWVVM--EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRNIKSD 146
Query: 132 NIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY-EEEYNELVDIYSFGM 188
NI + G G VK+ D G I +Q +++GTP +MAPE+ + Y VDI+S G+
Sbjct: 147 NILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 189 CILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ-----IKGFIEKCL-VPAS 242
+EM+ E PY +NP + + + P ++ +P+ + F+ +CL +
Sbjct: 206 MAIEMIEGEPPYLN-ENPLRALYLIATNGTP----ELQNPEKLSAIFRDFLNRCLEMDVE 260
Query: 243 ERLSAKDLLKDPFLQV 258
+R SAK+L++ FL++
Sbjct: 261 KRGSAKELIQHQFLKI 276
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 19/224 (8%)
Query: 44 KLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIK 100
KL EV +LK L N++K Y + D K+ ++ E + G L +R K VD
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFED--KRNYYLVMECYKGGELFDEIIHRMKFNEVDAA 139
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGL-AIAMQQPT 157
VI +Q+L G+ YLH HN I+HRDLK +N+ + + +KI D GL A+ Q
Sbjct: 140 VI---IKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194
Query: 158 ARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG- 216
+ +GT ++APE+ ++Y+E D++S G+ IL ++ YP + +I +KV G
Sbjct: 195 MKERLGTAYYIAPEVLRKKYDEKCDVWSIGV-ILFILLAGYPPFGGQTDQEILRKVEKGK 253
Query: 217 --IKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 257
V++ K I++ L + R+SA+ L+ P+++
Sbjct: 254 YTFDSPEWKNVSEGA-KDLIKQMLQFDSQRRISAQQALEHPWIK 296
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 11/229 (4%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIK 100
D + EV LLK L N++K ++ D + ++ EL+T G L K K
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEH 121
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLAIAMQQPT- 157
+Q+ G+ Y+H HN I+HRDLK +NI + + +KI D GL+ QQ T
Sbjct: 122 DAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 158 ARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 217
+ IGT ++APE+ Y+E D++S G+ + +++ P+ KN I K+V +G
Sbjct: 180 MKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGK 238
Query: 218 KPASLA--KVNDPQIKGFIEKCLV-PASERLSAKDLLKDPFLQVENQKE 263
L + K I K L S R++A L+ P++Q + +E
Sbjct: 239 YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSEE 287
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 19/222 (8%)
Query: 45 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKV 101
L EV +LK L N++K Y+ + D K+ ++ E++ G L R+K VD V
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFED--KRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV 108
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLAIAMQ-QPTA 158
I +Q+L G YLH HN I+HRDLK +N+ + + +KI D GL+ +
Sbjct: 109 I---MKQVLSGTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM 163
Query: 159 RSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG-- 216
+ +GT ++APE+ ++Y+E D++S G+ IL ++ YP + +I K+V G
Sbjct: 164 KERLGTAYYIAPEVLRKKYDEKCDVWSCGV-ILYILLCGYPPFGGQTDQEILKRVEKGKF 222
Query: 217 -IKPASLAKVNDPQIKGFIEKCLV-PASERLSAKDLLKDPFL 256
P +V+D + K ++ L S+R+SA++ L P++
Sbjct: 223 SFDPPDWTQVSD-EAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIK 100
D + EV LLK L N++K ++ D + ++ EL+T G L K K
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEH 121
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLAIAMQQPT- 157
+Q+ G+ Y+H HN I+HRDLK +NI + + +KI D GL+ QQ T
Sbjct: 122 DAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 158 ARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 217
+ IGT ++APE+ Y+E D++S G+ + +++ P+ KN I K+V +G
Sbjct: 180 MKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGK 238
Query: 218 KPASLA--KVNDPQIKGFIEKCLV-PASERLSAKDLLKDPFLQ 257
L + K I K L S R++A L+ P++Q
Sbjct: 239 YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 20/249 (8%)
Query: 18 DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNM 77
D+ G E A +K V + L EV +LK L N++K Y+ + D K+ +
Sbjct: 42 DKLTGAERAIKIIKKSSVTT-TSNSGALLDEVAVLKQLDHPNIMKLYEFFED--KRNYYL 98
Query: 78 ITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
+ E++ G L R+K VD VI +Q+L G YLH HN I+HRDLK +N+
Sbjct: 99 VMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLSGTTYLHKHN--IVHRDLKPENLL 153
Query: 135 VNGNHGE--VKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCIL 191
+ + +KI D GL+ + + +GT ++APE+ ++Y+E D++S G+ IL
Sbjct: 154 LESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGV-IL 212
Query: 192 EMVTFEYPYSECKNPAQIFKKVTSG---IKPASLAKVNDPQIKGFIEKCLV-PASERLSA 247
++ YP + +I K+V G P +V+D + K ++ L S+R+SA
Sbjct: 213 YILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD-EAKQLVKLMLTYEPSKRISA 271
Query: 248 KDLLKDPFL 256
++ L P++
Sbjct: 272 EEALNHPWI 280
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P ++ E+ +L +V FY ++ D + ++ M E G+L Q KK +
Sbjct: 45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIP 102
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+++ + ++ GL YL + I+HRD+K NI VN + GE+K+ D G++ + A
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 160
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY------SECKNPAQIFK 211
S +GT +M+PE L Y+ DI+S G+ ++EM YP + + P IF+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFE 220
Query: 212 ---KVTSGIKPASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFLQVENQKE 263
+ + P + V + + F+ KCL+ PA ER K L+ F++ + +E
Sbjct: 221 LLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA-ERADLKQLMVHAFIKRSDAEE 276
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 127/257 (49%), Gaps = 18/257 (7%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
EV +V +L P +K+ +E+ + KSL + +VV F+ + DD V ++ E+
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICR 125
Query: 84 SGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K+ K V + + RQ + G+ YLH++ +IHRDLK N+F+N + +VK
Sbjct: 126 RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVK 182
Query: 144 IGDLGLA--IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 200
IGD GLA I +++ GTP ++APE L ++ ++ VDI+S G CIL + P
Sbjct: 183 IGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLG-CILYTLLVGKPP 241
Query: 201 SECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
E + + ++ S+ + +P I + L + R S +LL D F
Sbjct: 242 FETSCLKETYIRIKKN--EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
Query: 260 NQKEPICDPLKLPIQSL 276
P++LP L
Sbjct: 300 YA------PMRLPTSCL 310
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
EV ++ +L P +K+ E+ + +SL +VV F+ + D+ V ++ EL
Sbjct: 47 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELCR 104
Query: 84 SGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K+ K + + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 105 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 161
Query: 144 IGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
IGD GLA ++ R ++ GTP ++APE+ ++ + VD++S G CI+ + P
Sbjct: 162 IGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPP 220
Query: 201 SECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
E + + ++ S+ K +P I+K L + R + +LL D F
Sbjct: 221 FETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 278
Query: 260 NQKEPICDPLKLPIQSLKMLRLPMSGPSSMDIDSDYKQLSL 300
P +LPI L + PSS+D S+ K L++
Sbjct: 279 YI------PARLPITCLTIPPRFSIAPSSLD-PSNRKPLTV 312
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 15/231 (6%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P ++ E+ +L +V FY ++ D + ++ M E G+L Q KK +
Sbjct: 48 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIP 105
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+++ + ++ GL YL + I+HRD+K NI VN + GE+K+ D G++ + A
Sbjct: 106 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDEMA 163
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK---KVT 214
+GT +M+PE L Y+ DI+S G+ ++EM YP + P IF+ +
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP----RPPMAIFELLDYIV 219
Query: 215 SGIKPASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFLQVENQKE 263
+ P + V + + F+ KCL+ PA ER K L+ F++ + +E
Sbjct: 220 NEPPPKLPSAVFSLEFQDFVNKCLIKNPA-ERADLKQLMVHAFIKRSDAEE 269
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
EV ++ +L P +K+ E+ + +SL +VV F+ + D+ V ++ EL
Sbjct: 43 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELCR 100
Query: 84 SGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K+ K + + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 101 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 157
Query: 144 IGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
IGD GLA ++ R ++ GTP ++APE+ ++ + VD++S G CI+ + P
Sbjct: 158 IGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPP 216
Query: 201 SECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
E + + ++ S+ K +P I+K L + R + +LL D F
Sbjct: 217 FETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 274
Query: 260 NQKEPICDPLKLPIQSLKMLRLPMSGPSSMDIDSDYKQLSL 300
P +LPI L + PSS+D S+ K L++
Sbjct: 275 YI------PARLPITCLTIPPXFSIAPSSLD-PSNRKPLTV 308
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
EV ++ +L P +K+ E+ + +SL +VV F+ + D+ V ++ EL
Sbjct: 43 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELCR 100
Query: 84 SGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K+ K + + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 101 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 157
Query: 144 IGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
IGD GLA ++ R ++ GTP ++APE+ ++ + VD++S G CI+ + P
Sbjct: 158 IGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPP 216
Query: 201 SECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
E + + ++ S+ K +P I+K L + R + +LL D F
Sbjct: 217 FETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 274
Query: 260 NQKEPICDPLKLPIQSLKMLRLPMSGPSSMDIDSDYKQLSL 300
P +LPI L + PSS+D S+ K L++
Sbjct: 275 YI------PARLPITCLTIPPRFSIAPSSLD-PSNRKPLTV 308
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 127/257 (49%), Gaps = 18/257 (7%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
EV +V +L P +K+ +E+ + KSL + +VV F+ + DD V ++ E+
Sbjct: 52 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICR 109
Query: 84 SGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K+ K V + + RQ + G+ YLH++ +IHRDLK N+F+N + +VK
Sbjct: 110 RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVK 166
Query: 144 IGDLGLAIAMQQPTARS--VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 200
IGD GLA ++ R + GTP ++APE L ++ ++ VDI+S G CIL + P
Sbjct: 167 IGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLG-CILYTLLVGKPP 225
Query: 201 SECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
E + + ++ S+ + +P I + L + R S +LL D F
Sbjct: 226 FETSCLKETYIRIKKN--EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 283
Query: 260 NQKEPICDPLKLPIQSL 276
P++LP L
Sbjct: 284 YA------PMRLPTSCL 294
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 22/261 (8%)
Query: 18 DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNM 77
D+ G E A + V Q D + L EV LLK L N++K Y+ + D K +
Sbjct: 70 DKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYFYL 126
Query: 78 ITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
+ E++T G L RK+ VD I RQ+L G+ Y+H + I+HRDLK +N+
Sbjct: 127 VGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHKNK--IVHRDLKPENLL 181
Query: 135 VNGNH--GEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCIL 191
+ ++I D GL+ + + IGT ++APE+ Y+E D++S G+ +
Sbjct: 182 LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILY 241
Query: 192 EMVTFEYPYSECKNPAQIFKKVTSGIKPASL---AKVNDPQIKGFIEKCL--VPASERLS 246
+++ P++ N I KKV G L KV++ K I K L VP S R+S
Sbjct: 242 ILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESA-KDLIRKMLTYVP-SMRIS 298
Query: 247 AKDLLKDPFLQVENQKEPICD 267
A+D L ++Q +++ D
Sbjct: 299 ARDALDHEWIQTYTKEQISVD 319
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 127/257 (49%), Gaps = 18/257 (7%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
EV +V +L P +K+ +E+ + KSL + +VV F+ + DD V ++ E+
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICR 125
Query: 84 SGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K+ K V + + RQ + G+ YLH++ +IHRDLK N+F+N + +VK
Sbjct: 126 RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVK 182
Query: 144 IGDLGLAIAMQQPTARS--VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 200
IGD GLA ++ R + GTP ++APE L ++ ++ VDI+S G CIL + P
Sbjct: 183 IGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLG-CILYTLLVGKPP 241
Query: 201 SECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
E + + ++ S+ + +P I + L + R S +LL D F
Sbjct: 242 FETSCLKETYIRIKKN--EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
Query: 260 NQKEPICDPLKLPIQSL 276
P++LP L
Sbjct: 300 YA------PMRLPTSCL 310
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 22/261 (8%)
Query: 18 DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNM 77
D+ G E A + V Q D + L EV LLK L N++K Y+ + D K +
Sbjct: 71 DKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYFYL 127
Query: 78 ITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
+ E++T G L RK+ VD I RQ+L G+ Y+H + I+HRDLK +N+
Sbjct: 128 VGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHKNK--IVHRDLKPENLL 182
Query: 135 VNGNH--GEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCIL 191
+ ++I D GL+ + + IGT ++APE+ Y+E D++S G+ +
Sbjct: 183 LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILY 242
Query: 192 EMVTFEYPYSECKNPAQIFKKVTSGIKPASL---AKVNDPQIKGFIEKCL--VPASERLS 246
+++ P++ N I KKV G L KV++ K I K L VP S R+S
Sbjct: 243 ILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESA-KDLIRKMLTYVP-SMRIS 299
Query: 247 AKDLLKDPFLQVENQKEPICD 267
A+D L ++Q +++ D
Sbjct: 300 ARDALDHEWIQTYTKEQISVD 320
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 127/257 (49%), Gaps = 18/257 (7%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
EV +V +L P +K+ +E+ + KSL + +VV F+ + DD V ++ E+
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICR 125
Query: 84 SGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K+ K V + + RQ + G+ YLH++ +IHRDLK N+F+N + +VK
Sbjct: 126 RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVK 182
Query: 144 IGDLGLAIAMQQPTARS--VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 200
IGD GLA ++ R + GTP ++APE L ++ ++ VDI+S G CIL + P
Sbjct: 183 IGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLG-CILYTLLVGKPP 241
Query: 201 SECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
E + + ++ S+ + +P I + L + R S +LL D F
Sbjct: 242 FETSCLKETYIRIKKN--EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
Query: 260 NQKEPICDPLKLPIQSL 276
P++LP L
Sbjct: 300 YA------PMRLPTSCL 310
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 22/261 (8%)
Query: 18 DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNM 77
D+ G E A + V Q D + L EV LLK L N++K Y+ + D K +
Sbjct: 47 DKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYFYL 103
Query: 78 ITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
+ E++T G L RK+ VD I RQ+L G+ Y+H + I+HRDLK +N+
Sbjct: 104 VGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHKNK--IVHRDLKPENLL 158
Query: 135 VNGNH--GEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCIL 191
+ ++I D GL+ + + IGT ++APE+ Y+E D++S G+ +
Sbjct: 159 LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILY 218
Query: 192 EMVTFEYPYSECKNPAQIFKKVTSGIKPASL---AKVNDPQIKGFIEKCL--VPASERLS 246
+++ P++ N I KKV G L KV++ K I K L VP S R+S
Sbjct: 219 ILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESA-KDLIRKMLTYVP-SMRIS 275
Query: 247 AKDLLKDPFLQVENQKEPICD 267
A+D L ++Q +++ D
Sbjct: 276 ARDALDHEWIQTYTKEQISVD 296
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 19/281 (6%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
EV ++ +L P +K+ E+ + +SL +VV F+ + D+ V ++ EL
Sbjct: 65 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELCR 122
Query: 84 SGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K+ K + + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 123 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 179
Query: 144 IGDLGLAIAMQQPTARS--VIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
IGD GLA ++ R + GTP ++APE+ ++ + VD++S G CI+ + P
Sbjct: 180 IGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPP 238
Query: 201 SECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
E + + ++ S+ K +P I+K L + R + +LL D F
Sbjct: 239 FETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 296
Query: 260 NQKEPICDPLKLPIQSLKMLRLPMSGPSSMDIDSDYKQLSL 300
P +LPI L + PSS+D S+ K L++
Sbjct: 297 YI------PARLPITCLTIPPRFSIAPSSLD-PSNRKPLTV 330
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 19/281 (6%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
EV ++ +L P +K+ E+ + +SL +VV F+ + D+ V ++ EL
Sbjct: 67 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELCR 124
Query: 84 SGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K+ K + + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 125 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 181
Query: 144 IGDLGLAIAMQQPTARS--VIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
IGD GLA ++ R + GTP ++APE+ ++ + VD++S G CI+ + P
Sbjct: 182 IGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPP 240
Query: 201 SECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
E + + ++ S+ K +P I+K L + R + +LL D F
Sbjct: 241 FETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298
Query: 260 NQKEPICDPLKLPIQSLKMLRLPMSGPSSMDIDSDYKQLSL 300
P +LPI L + PSS+D S+ K L++
Sbjct: 299 YI------PARLPITCLTIPPRFSIAPSSLD-PSNRKPLTV 332
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 123/272 (45%), Gaps = 59/272 (21%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDD----------KKKTVNMIT----------EL 81
L + SEV LL SL VV++Y +W++ KKK+ I +L
Sbjct: 46 LSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDL 105
Query: 82 FTSGNLRQYRKKHKNVDIKVIKNWA--RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNH 139
S NL Q R ++ W RQIL L Y+HS IIHR+LK NIF++ +
Sbjct: 106 IHSENLNQQRDEY----------WRLFRQILEALSYIHSQG--IIHRNLKPXNIFIDESR 153
Query: 140 GEVKIGDLGLAIAMQQP----------------TARSVIGTPEFMAPELYE--EEYNELV 181
VKIGD GLA + + S IGT ++A E+ + YNE +
Sbjct: 154 N-VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKI 212
Query: 182 DIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTS-GIKPASLAKVNDPQIKGFIEKCLVP 240
D YS G+ E + YP+S I KK+ S I+ N +++ I + L+
Sbjct: 213 DXYSLGIIFFEXI---YPFSTGXERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLID 269
Query: 241 A--SERLSAKDLLKDPFLQVENQKEPICDPLK 270
++R A+ LL +L V++Q E I + LK
Sbjct: 270 HDPNKRPGARTLLNSGWLPVKHQDEVIKEALK 301
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 18/212 (8%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV 97
P LQ +EV +L+ + N++ F K + ++T+ +L +
Sbjct: 49 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHLHASETKF 105
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 157
++K + + ARQ G+ YLH+ + IIHRDLK +NIF++ ++ VKIGD GLA + +
Sbjct: 106 EMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDN-TVKIGDFGLATVKSRWS 162
Query: 158 A----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQI 209
+ G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI
Sbjct: 163 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 222
Query: 210 FKKVTSGIKPASLAKV--NDP-QIKGFIEKCL 238
+ V G L+KV N P ++K + +CL
Sbjct: 223 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECL 254
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 18/212 (8%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV 97
P LQ +EV +L+ + N++ F K + ++T+ +L +
Sbjct: 61 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHLHASETKF 117
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 157
++K + + ARQ G+ YLH+ + IIHRDLK +NIF++ ++ VKIGD GLA + +
Sbjct: 118 EMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWS 174
Query: 158 A----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQI 209
+ G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 210 FKKVTSGIKPASLAKV--NDP-QIKGFIEKCL 238
+ V G L+KV N P ++K + +CL
Sbjct: 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECL 266
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 131/256 (51%), Gaps = 17/256 (6%)
Query: 20 FAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMI 78
G EVA VKI D QL P LQKL+ EV ++K L N+VK ++ V + +KT+ ++
Sbjct: 38 LTGREVA---VKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLV 92
Query: 79 TELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
E + G + Y H + K + RQI+ + Y H I+HRDLK +N+ ++G+
Sbjct: 93 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY--IVHRDLKAENLLLDGD 150
Query: 139 HGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMAPELYE-EEYN-ELVDIYSFGMCILEMVT 195
+KI D G + + G+P + APEL++ ++Y+ VD++S G+ + +V+
Sbjct: 151 MN-IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 196 FEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPF 255
P+ + +N ++ ++V G D + L P +R S + ++KD +
Sbjct: 210 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLLVLNPI-KRGSLEQIMKDRW 267
Query: 256 LQVENQKE---PICDP 268
+ V +++E P +P
Sbjct: 268 MNVGHEEEELKPYTEP 283
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 114/232 (49%), Gaps = 17/232 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH-KNVDIKV 101
Q + EV L+ L+ N +++ ++ + + M L ++ +L + KK + V+I
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA 158
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 161
+ + A L GL YLHSHN +IHRD+K NI ++ G VK+GD G A M A
Sbjct: 159 VTHGA---LQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIMA--PANXF 210
Query: 162 IGTPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 217
+GTP +MAPE+ E +Y+ VD++S G+ +E+ + P N +
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNE 269
Query: 218 KPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKDPFLQVENQKEPICD 267
PA + + F++ CL +P +R +++ LLK F+ E I D
Sbjct: 270 SPALQSGHWSEYFRNFVDSCLQKIP-QDRPTSEVLLKHRFVLRERPPTVIMD 320
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----RKKHKNVD 98
Q L SEV+LL+ LK N+V++Y +D T+ ++ E G+L K+ + +D
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 99 IKVIKNWARQILHGLVYLHSHN---PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
+ + Q+ L H + ++HRDLK N+F++G VK+GD GLA +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNH 168
Query: 156 PT--ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYS 201
T A++ +GTP +M+PE + YNE DI+S G + E+ P++
Sbjct: 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 125/261 (47%), Gaps = 22/261 (8%)
Query: 18 DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNM 77
D+ G E A + V Q D + L EV LLK L N+ K Y+ + D K +
Sbjct: 47 DKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQLDHPNIXKLYEFFED--KGYFYL 103
Query: 78 ITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
+ E++T G L RK+ VD I RQ+L G+ Y H + I+HRDLK +N+
Sbjct: 104 VGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYXHKNK--IVHRDLKPENLL 158
Query: 135 VNGNH--GEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCIL 191
+ ++I D GL+ + + IGT ++APE+ Y+E D++S G+ +
Sbjct: 159 LESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILY 218
Query: 192 EMVTFEYPYSECKNPAQIFKKVTSGIKPASL---AKVNDPQIKGFIEKCL--VPASERLS 246
+++ P++ N I KKV G L KV++ K I K L VP S R+S
Sbjct: 219 ILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESA-KDLIRKXLTYVP-SXRIS 275
Query: 247 AKDLLKDPFLQVENQKEPICD 267
A+D L ++Q +++ D
Sbjct: 276 ARDALDHEWIQTYTKEQISVD 296
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 126/257 (49%), Gaps = 22/257 (8%)
Query: 18 DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNM 77
D+ G E A + V Q D + L EV LLK L N++K Y+ + D K +
Sbjct: 53 DKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYFYL 109
Query: 78 ITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
+ E++T G L RK+ VD I RQ+L G+ Y+H + I+HRDLK +N+
Sbjct: 110 VGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLSGITYMHKNK--IVHRDLKPENLL 164
Query: 135 VNGNH--GEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCIL 191
+ ++I D GL+ + + IGT ++APE+ Y+E D++S G+ +
Sbjct: 165 LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILY 224
Query: 192 EMVTFEYPYSECKNPAQIFKKVTSGIKPASL---AKVNDPQIKGFIEKCL--VPASERLS 246
+++ P++ N I KKV G L KV++ K I K L VP S R+S
Sbjct: 225 ILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESA-KDLIRKMLTYVP-SMRIS 281
Query: 247 AKDLLKDPFLQVENQKE 263
A+D L ++Q +++
Sbjct: 282 ARDALDHEWIQTYTKEQ 298
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----RKKHKNVD 98
Q L SEV+LL+ LK N+V++Y +D T+ ++ E G+L K+ + +D
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 99 IKVIKNWARQILHGLVYLHSHN---PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
+ + Q+ L H + ++HRDLK N+F++G VK+GD GLA +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNH 168
Query: 156 PT--ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYS 201
T A++ +GTP +M+PE + YNE DI+S G + E+ P++
Sbjct: 169 DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 17/235 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH-KNVDIKV 101
Q + EV L+ L+ N +++ ++ + + M L ++ +L + KK + V+I
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA 119
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 161
+ + A L GL YLHSHN +IHRD+K NI ++ G VK+GD G A M A
Sbjct: 120 VTHGA---LQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIM--APANXF 171
Query: 162 IGTPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 217
+GTP +MAPE+ E +Y+ VD++S G+ +E+ + P N +
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNE 230
Query: 218 KPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKDPFLQVENQKEPICDPLK 270
PA + + F++ CL +P +R +++ LLK F+ E I D ++
Sbjct: 231 SPALQSGHWSEYFRNFVDSCLQKIP-QDRPTSEVLLKHRFVLRERPPTVIMDLIQ 284
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 25/280 (8%)
Query: 20 FAGIEVAWSRVKIDDVLQLPGDLQK-LYSEVHLLKSLKDD-NVVKFYKSWVDDKKKTVN- 76
+ G V ++ V+ + GD ++ + E+++LK N+ +Y +++ ++
Sbjct: 41 YKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100
Query: 77 ---MITELFTSGNLRQYRKKHKNVDIKVIKNW----ARQILHGLVYLHSHNPPIIHRDLK 129
++ E +G++ K K +K + W R+IL GL +LH H +IHRD+K
Sbjct: 101 QLWLVMEFCGAGSVTDLIKNTKGNTLK--EEWIAYICREILRGLSHLHQHK--VIHRDIK 156
Query: 130 CDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPELY------EEEYNELV 181
N+ + N EVK+ D G++ + + R + IGTP +MAPE+ + Y+
Sbjct: 157 GQNVLLTEN-AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKS 215
Query: 182 DIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP- 240
D++S G+ +EM P + +P + + P +K + + FIE CLV
Sbjct: 216 DLWSLGITAIEMAEGAPPLCDM-HPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKN 274
Query: 241 ASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKMLR 280
S+R + + L+K PF++ + + + LK I K R
Sbjct: 275 HSQRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKR 314
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 35/266 (13%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
+VA R+ ++ + + +L E+ + N+V +Y S+V K + ++ +L +
Sbjct: 42 KVAIKRINLE---KCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV--VKDELWLVMKLLS 96
Query: 84 SGNLRQYRK------KHKN--VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV 135
G++ K +HK+ +D I R++L GL YLH + IHRD+K NI +
Sbjct: 97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILL 154
Query: 136 NGNHGEVKIGDLGLAIAM-------QQPTARSVIGTPEFMAPELYEE--EYNELVDIYSF 186
G G V+I D G++ + + ++ +GTP +MAPE+ E+ Y+ DI+SF
Sbjct: 155 -GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 213
Query: 187 GMCILEMVTFEYPYSECKNPAQIFK--------KVTSGIKPASLAKVNDPQIKGFIEKCL 238
G+ +E+ T PY + P ++ + +G++ + K + I CL
Sbjct: 214 GITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCL 272
Query: 239 VPASE-RLSAKDLLKDPFLQVENQKE 263
E R +A +LL+ F Q KE
Sbjct: 273 QKDPEKRPTAAELLRHKFFQKAKNKE 298
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 25/237 (10%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGN----LRQYRKKHKN 96
+L+ E+ +L S N+VK ++ + + ++ E G + + +
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFY--YENNLWILIEFCAGGAVDAVMLELERPLTE 134
Query: 97 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
I+V+ +Q L L YLH + IIHRDLK NI + G++K+ D G++ +
Sbjct: 135 SQIQVV---CKQTLDALNYLHDNK--IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRT 188
Query: 157 TAR--SVIGTPEFMAPELYEEE------YNELVDIYSFGMCILEMVTFEYPYSECKNPAQ 208
R S IGTP +MAPE+ E Y+ D++S G+ ++EM E P+ E NP +
Sbjct: 189 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMR 247
Query: 209 IFKKVTSGIKPASLAKVN--DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 262
+ K+ +P +LA+ + K F++KCL R + LL+ PF+ V++ K
Sbjct: 248 VLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 18/212 (8%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV 97
P LQ +EV +L+ + N++ F + ++T+ +L +
Sbjct: 61 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STAPQLAIVTQWCEGSSLYHHLHASETKF 117
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 157
++K + + ARQ G+ YLH+ + IIHRDLK +NIF++ ++ VKIGD GLA + +
Sbjct: 118 EMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWS 174
Query: 158 A----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQI 209
+ G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 210 FKKVTSGIKPASLAKV--NDP-QIKGFIEKCL 238
+ V G L+KV N P ++K + +CL
Sbjct: 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECL 266
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 25/237 (10%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGN----LRQYRKKHKN 96
+L+ E+ +L S N+VK ++ + + ++ E G + + +
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFY--YENNLWILIEFCAGGAVDAVMLELERPLTE 134
Query: 97 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
I+V+ +Q L L YLH + IIHRDLK NI + G++K+ D G++ +
Sbjct: 135 SQIQVV---CKQTLDALNYLHDNK--IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRX 188
Query: 157 TAR--SVIGTPEFMAPELYEEE------YNELVDIYSFGMCILEMVTFEYPYSECKNPAQ 208
R S IGTP +MAPE+ E Y+ D++S G+ ++EM E P+ E NP +
Sbjct: 189 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMR 247
Query: 209 IFKKVTSGIKPASLAKVN--DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 262
+ K+ +P +LA+ + K F++KCL R + LL+ PF+ V++ K
Sbjct: 248 VLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR+Y +KHK +D
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI 117
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 118 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 174
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 231
Query: 215 SGIKPASL 222
K +
Sbjct: 232 GNDKQGQM 239
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 19/194 (9%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDK 71
+ YK ++ G+ VA VK+D P + E+ L+K LK +N+V+ Y V
Sbjct: 20 TVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR---EISLMKELKHENIVRLYD--VIHT 74
Query: 72 KKTVNMITELFTSGNLRQYRKKH------KNVDIKVIKNWARQILHGLVYLHSHNPPIIH 125
+ + ++ E F +L++Y + +++ ++K + Q+L GL + H + I+H
Sbjct: 75 ENKLTLVFE-FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILH 131
Query: 126 RDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELY--EEEYNELV 181
RDLK N+ +N G++K+GD GLA A P T S + T + AP++ Y+ +
Sbjct: 132 RDLKPQNLLIN-KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSI 190
Query: 182 DIYSFGMCILEMVT 195
DI+S G + EM+T
Sbjct: 191 DIWSCGCILAEMIT 204
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 13/201 (6%)
Query: 20 FAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMI 78
G EVA +KI D QL P LQKL+ EV ++K L N+VK ++ V + +KT+ +I
Sbjct: 35 LTGREVA---IKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLI 89
Query: 79 TELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
E + G + Y H + K ++ RQI+ + Y H I+HRDLK +N+ ++ +
Sbjct: 90 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDAD 147
Query: 139 HGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYE-EEYN-ELVDIYSFGMCILEMVT 195
+KI D G + + G+P + APEL++ ++Y+ VD++S G+ + +V+
Sbjct: 148 MN-IKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 206
Query: 196 FEYPYSECKNPAQIFKKVTSG 216
P+ + +N ++ ++V G
Sbjct: 207 GSLPF-DGQNLKELRERVLRG 226
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 18/259 (6%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
EV ++ +L P +K+ E+ + +SL +VV F+ + D+ V ++ EL
Sbjct: 41 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELCR 98
Query: 84 SGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K+ K + + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 99 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 155
Query: 144 IGDLGLAIAMQQPTARS--VIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
IGD GLA ++ R + GTP ++APE+ ++ + VD++S G CI+ + P
Sbjct: 156 IGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPP 214
Query: 201 SECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
E + + ++ S+ K +P I+K L + R + +LL D F
Sbjct: 215 FETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272
Query: 260 NQKEPICDPLKLPIQSLKM 278
P +LPI L +
Sbjct: 273 YI------PARLPITCLTI 285
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 137/259 (52%), Gaps = 21/259 (8%)
Query: 20 FAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMI 78
G EVA VKI D QL LQKL+ EV ++K L N+VK ++ V + +KT+ ++
Sbjct: 37 LTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 79 TELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
E + G + Y H + K + RQI+ + Y H I+HRDLK +N+ ++ +
Sbjct: 92 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 139 HGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMAPELYE-EEYN-ELVDIYSFGMCILEMVT 195
+KI D G + + G+P + APEL++ ++Y+ VD++S G+ + +V+
Sbjct: 150 MN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 196 FEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKD 253
P+ + +N ++ ++V G P ++ + +K F+ ++ S+R + + ++KD
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 264
Query: 254 PFLQV---ENQKEPICDPL 269
++ V +++ +P +PL
Sbjct: 265 RWMNVGHEDDELKPYVEPL 283
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 108/201 (53%), Gaps = 13/201 (6%)
Query: 20 FAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMI 78
G EVA +KI D QL P LQKL+ EV ++K L N+VK ++ V + +KT+ +I
Sbjct: 38 LTGREVA---IKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLI 92
Query: 79 TELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
E + G + Y H + K ++ RQI+ + Y H I+HRDLK +N+ ++ +
Sbjct: 93 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDAD 150
Query: 139 HGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYE-EEYN-ELVDIYSFGMCILEMVT 195
+KI D G + + G P + APEL++ ++Y+ VD++S G+ + +V+
Sbjct: 151 MN-IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 196 FEYPYSECKNPAQIFKKVTSG 216
P+ + +N ++ ++V G
Sbjct: 210 GSLPF-DGQNLKELRERVLRG 229
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 86 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 145
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 146 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 202
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 203 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 259
Query: 215 SGIKPASL 222
K +
Sbjct: 260 GNDKQGQM 267
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 62 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 121
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 122 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 178
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 235
Query: 215 SGIKPASL 222
K +
Sbjct: 236 GNDKQGQM 243
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 25/237 (10%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGN----LRQYRKKHKN 96
+L+ E+ +L S N+VK ++ + + ++ E G + + +
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFY--YENNLWILIEFCAGGAVDAVMLELERPLTE 134
Query: 97 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
I+V+ +Q L L YLH + IIHRDLK NI + G++K+ D G++ +
Sbjct: 135 SQIQVV---CKQTLDALNYLHDNK--IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRX 188
Query: 157 TAR--SVIGTPEFMAPELYEEE------YNELVDIYSFGMCILEMVTFEYPYSECKNPAQ 208
R IGTP +MAPE+ E Y+ D++S G+ ++EM E P+ E NP +
Sbjct: 189 IQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMR 247
Query: 209 IFKKVTSGIKPASLAKVN--DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 262
+ K+ +P +LA+ + K F++KCL R + LL+ PF+ V++ K
Sbjct: 248 VLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 137/259 (52%), Gaps = 21/259 (8%)
Query: 20 FAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMI 78
G EVA V+I D QL LQKL+ EV ++K L N+VK ++ V + +KT+ ++
Sbjct: 37 LTGKEVA---VRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 79 TELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
E + G + Y H + K + RQI+ + Y H I+HRDLK +N+ ++ +
Sbjct: 92 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 139 HGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMAPELYE-EEYN-ELVDIYSFGMCILEMVT 195
+KI D G + + G+P + APEL++ ++Y+ VD++S G+ + +V+
Sbjct: 150 MN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 196 FEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKD 253
P+ + +N ++ ++V G P ++ + +K F+ ++ S+R + + ++KD
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 264
Query: 254 PFLQV---ENQKEPICDPL 269
++ V +++ +P +PL
Sbjct: 265 RWMNVGHEDDELKPYVEPL 283
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 61 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 120
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 121 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 177
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 178 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 234
Query: 215 SGIKPASL 222
K +
Sbjct: 235 GNDKQGQM 242
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----RKKHKNVD 98
Q L SEV+LL+ LK N+V++Y +D T+ ++ E G+L K+ + +D
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 99 IKVIKNWARQILHGLVYLHSHN---PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ- 154
+ + Q+ L H + ++HRDLK N+F++G VK+GD GLA +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNH 168
Query: 155 -QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYS 201
+ A+ +GTP +M+PE + YNE DI+S G + E+ P++
Sbjct: 169 DEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 136/259 (52%), Gaps = 21/259 (8%)
Query: 20 FAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMI 78
G EVA VKI D QL LQKL+ EV ++K L N+VK ++ V + +KT+ ++
Sbjct: 37 LTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 79 TELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
E + G + Y H + K + RQI+ + Y H I+HRDLK +N+ ++ +
Sbjct: 92 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 139 HGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMAPELYE-EEYN-ELVDIYSFGMCILEMVT 195
+KI D G + + G P + APEL++ ++Y+ VD++S G+ + +V+
Sbjct: 150 MN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 196 FEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKD 253
P+ + +N ++ ++V G P ++ + +K F+ ++ S+R + + ++KD
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 264
Query: 254 PFLQV---ENQKEPICDPL 269
++ V +++ +P +PL
Sbjct: 265 RWMNVGHEDDELKPYVEPL 283
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 60 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 119
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 120 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 176
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 177 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 233
Query: 215 SGIKPASL 222
K +
Sbjct: 234 GNDKQGQM 241
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 55 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 115 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 171
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 228
Query: 215 SGIKPASL 222
K +
Sbjct: 229 GNDKQGQM 236
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 117
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 118 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 174
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 231
Query: 215 SGIKPASL 222
K +
Sbjct: 232 GNDKQGQM 239
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 59 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 118
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 119 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 175
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 176 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 232
Query: 215 SGIKPASL 222
K +
Sbjct: 233 GNDKQGQM 240
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 35/260 (13%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFT 83
+VA R+ ++ + + +L E+ + N+V +Y S+V K + ++ +L +
Sbjct: 37 KVAIKRINLE---KCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV--VKDELWLVMKLLS 91
Query: 84 SGNLRQYRK------KHKN--VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV 135
G++ K +HK+ +D I R++L GL YLH + IHRD+K NI +
Sbjct: 92 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILL 149
Query: 136 NGNHGEVKIGDLGLAIAM-------QQPTARSVIGTPEFMAPELYEE--EYNELVDIYSF 186
G G V+I D G++ + + ++ +GTP +MAPE+ E+ Y+ DI+SF
Sbjct: 150 -GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 208
Query: 187 GMCILEMVTFEYPYSECKNPAQIFK--------KVTSGIKPASLAKVNDPQIKGFIEKCL 238
G+ +E+ T PY + P ++ + +G++ + K + I CL
Sbjct: 209 GITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCL 267
Query: 239 VPASE-RLSAKDLLKDPFLQ 257
E R +A +LL+ F Q
Sbjct: 268 QKDPEKRPTAAELLRHKFFQ 287
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIK--VIKNW 105
EV +L ++K N+V++ +S+ ++ ++ ++ + G+L + K V + I +W
Sbjct: 73 EVAVLANMKHPNIVQYRESF--EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT--ARSVIG 163
QI L H H+ I+HRD+K NIF+ + G V++GD G+A + AR+ IG
Sbjct: 131 FVQIC--LALKHVHDRKILHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIG 187
Query: 164 TPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
TP +++PE+ E + YN DI++ G + E+ T ++ + + K ++ P SL
Sbjct: 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSL 247
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 53 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 112
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 113 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 169
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 170 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 226
Query: 215 SGIKPASL 222
K +
Sbjct: 227 GNDKQGQM 234
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 54 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 113
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 114 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 170
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 171 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 227
Query: 215 SGIKPASL 222
K +
Sbjct: 228 GNDKQGQM 235
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 136/259 (52%), Gaps = 21/259 (8%)
Query: 20 FAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMI 78
G EVA VKI D QL LQKL+ EV ++K L N+VK ++ V + +KT+ ++
Sbjct: 37 LTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 79 TELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
E + G + Y H + K + RQI+ + Y H I+HRDLK +N+ ++ +
Sbjct: 92 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 139 HGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMAPELYE-EEYN-ELVDIYSFGMCILEMVT 195
+KI D G + + G+P + APEL++ ++Y+ VD++S G+ + +V+
Sbjct: 150 MN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 196 FEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKD 253
P+ + +N ++ ++V G P ++ + +K F+ ++ S+R + + ++KD
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 264
Query: 254 PFLQV---ENQKEPICDPL 269
++ V +++ +P PL
Sbjct: 265 RWMNVGHEDDELKPYVAPL 283
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 55 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 115 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 171
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 228
Query: 215 SGIKPASL 222
K +
Sbjct: 229 GNDKQGQM 236
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 133 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 189
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 246
Query: 215 SGIKPASL 222
K +
Sbjct: 247 GNDKQGQM 254
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 13/183 (7%)
Query: 21 AGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITE 80
G +VA +K + DL+K E+ +L++L +N+VK+ +D + +I E
Sbjct: 49 TGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105
Query: 81 LFTSGNLRQYRKKHKN-VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNH 139
SG+L++Y K+KN +++K +A QI G+ YL S +HRDL N+ V H
Sbjct: 106 FLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEH 163
Query: 140 GEVKIGDLGLAIAM----QQPTARSVIGTPEF-MAPE-LYEEEYNELVDIYSFGMCILEM 193
+VKIGD GL A+ + T + +P F APE L + ++ D++SFG+ + E+
Sbjct: 164 -QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222
Query: 194 VTF 196
+T+
Sbjct: 223 LTY 225
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 107/231 (46%), Gaps = 27/231 (11%)
Query: 30 VKIDDVLQ-LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
VKI V+ P Q +EV +L+ + N++ F D V E S +
Sbjct: 63 VKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCE--GSSLYK 120
Query: 89 QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLG 148
+ + + + ARQ G+ YLH+ N IIHRD+K +NIF++ VKIGD G
Sbjct: 121 HLHVQETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGL-TVKIGDFG 177
Query: 149 LAIA---------MQQPTARSVIGTPEFMAPELYEEEYNELV----DIYSFGMCILEMVT 195
LA ++QPT G+ +MAPE+ + N D+YS+G+ + E++T
Sbjct: 178 LATVKSRWSGSQQVEQPT-----GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
Query: 196 FEYPYSECKNPAQIFKKVTSGIKPASLAKV--NDPQ-IKGFIEKCLVPASE 243
E PYS N QI V G L+K+ N P+ +K + C+ E
Sbjct: 233 GELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKE 283
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 26/238 (10%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGN----LRQYRKKHKN 96
+L+ E+ +L S N+VK ++ + + ++ E G + + +
Sbjct: 50 ELEDYMVEIDILASCDHPNIVKLLDAFY--YENNLWILIEFCAGGAVDAVMLELERPLTE 107
Query: 97 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
I+V+ +Q L L YLH + IIHRDLK NI + G++K+ D G++ +
Sbjct: 108 SQIQVV---CKQTLDALNYLHDNK--IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRT 161
Query: 157 TAR---SVIGTPEFMAPELYEEE------YNELVDIYSFGMCILEMVTFEYPYSECKNPA 207
+ S IGTP +MAPE+ E Y+ D++S G+ ++EM E P+ E NP
Sbjct: 162 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPM 220
Query: 208 QIFKKVTSGIKPASLAKVN--DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 262
++ K+ +P +LA+ + K F++KCL R + LL+ PF+ V++ K
Sbjct: 221 RVLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 277
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 133 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 189
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 246
Query: 215 SGIKPASL 222
K +
Sbjct: 247 GNDKQGQM 254
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH---- 94
P LQ +EV +L+ + N++ F K + ++T+ +L Y H
Sbjct: 50 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIET 104
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
K IK+I + ARQ G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA
Sbjct: 105 KFEMIKLI-DIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKS 160
Query: 155 QPTA----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ + + G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 207 AQIFKKVTSGIKPASLAKV--NDPQ-IKGFIEKCL 238
QI V G L+KV N P+ +K + +CL
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 255
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 137/259 (52%), Gaps = 21/259 (8%)
Query: 20 FAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMI 78
G EVA VKI D QL LQKL+ EV ++K L N+VK ++ V + +KT+ ++
Sbjct: 30 LTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 84
Query: 79 TELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
E + G + Y H + K + RQI+ + Y H I+HRDLK +N+ ++ +
Sbjct: 85 MEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 142
Query: 139 HGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMAPELYE-EEYN-ELVDIYSFGMCILEMVT 195
+KI D G + + G+P + APEL++ ++Y+ VD++S G+ + +V+
Sbjct: 143 MN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 201
Query: 196 FEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKD 253
P+ + +N ++ ++V G P ++ + +K F+ ++ S+R + + ++KD
Sbjct: 202 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 257
Query: 254 PFLQV---ENQKEPICDPL 269
++ V +++ +P +PL
Sbjct: 258 RWMNVGHEDDELKPYVEPL 276
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH---- 94
P LQ +EV +L+ + N++ F K + ++T+ +L Y H
Sbjct: 72 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIET 126
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
K IK+I + ARQ G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA
Sbjct: 127 KFEMIKLI-DIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKS 182
Query: 155 QPTA----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ + + G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N
Sbjct: 183 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 242
Query: 207 AQIFKKVTSGIKPASLAKV--NDPQ-IKGFIEKCL 238
QI V G L+KV N P+ +K + +CL
Sbjct: 243 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 277
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH---- 94
P LQ +EV +L+ + N++ F K + ++T+ +L Y H
Sbjct: 73 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIET 127
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
K IK+I + ARQ G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA
Sbjct: 128 KFEMIKLI-DIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKS 183
Query: 155 QPTA----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ + + G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 207 AQIFKKVTSGIKPASLAKV--NDPQ-IKGFIEKCL 238
QI V G L+KV N P+ +K + +CL
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 278
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 136/259 (52%), Gaps = 21/259 (8%)
Query: 20 FAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMI 78
G EVA V+I D QL LQKL+ EV ++K L N+VK ++ V + +KT+ ++
Sbjct: 37 LTGKEVA---VRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 79 TELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
E + G + Y H + K + RQI+ + Y H I+HRDLK +N+ ++ +
Sbjct: 92 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 139 HGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMAPELYE-EEYN-ELVDIYSFGMCILEMVT 195
+KI D G + G+P + APEL++ ++Y+ VD++S G+ + +V+
Sbjct: 150 MN-IKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 196 FEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKD 253
P+ + +N ++ ++V G P ++ + +K F+ ++ S+R + + ++KD
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 264
Query: 254 PFLQV---ENQKEPICDPL 269
++ V +++ +P +PL
Sbjct: 265 RWMNVGHEDDELKPYVEPL 283
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P ++ E+ +L +V FY ++ D + ++ M E G+L Q K+ K +
Sbjct: 55 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKEAKRIP 112
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+++ + +L GL YL + I+HRD+K NI VN + GE+K+ D G++ + A
Sbjct: 113 EEILGKVSIAVLRGLAYLREKHQ-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 170
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
S +GT +MAPE L Y+ DI+S G+ ++E+ YP
Sbjct: 171 NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 13/183 (7%)
Query: 21 AGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITE 80
G +VA +K + DL+K E+ +L++L +N+VK+ +D + +I E
Sbjct: 37 TGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGICTEDGGNGIKLIME 93
Query: 81 LFTSGNLRQYRKKHKN-VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNH 139
SG+L++Y K+KN +++K +A QI G+ YL S +HRDL N+ V H
Sbjct: 94 FLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEH 151
Query: 140 GEVKIGDLGLAIAM----QQPTARSVIGTPEF-MAPE-LYEEEYNELVDIYSFGMCILEM 193
+VKIGD GL A+ + T + +P F APE L + ++ D++SFG+ + E+
Sbjct: 152 -QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 210
Query: 194 VTF 196
+T+
Sbjct: 211 LTY 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH---- 94
P LQ +EV +L+ + N++ F K + ++T+ +L Y H
Sbjct: 50 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIET 104
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
K IK+I + ARQ G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA
Sbjct: 105 KFEMIKLI-DIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKS 160
Query: 155 QPTA----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ + + G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 207 AQIFKKVTSGIKPASLAKV--NDPQ-IKGFIEKCL 238
QI V G L+KV N P+ +K + +CL
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 255
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH---- 94
P LQ +EV +L+ + N++ F K + ++T+ +L Y H
Sbjct: 45 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIET 99
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
K IK+I + ARQ G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA
Sbjct: 100 KFEMIKLI-DIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKS 155
Query: 155 QPTA----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ + + G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 207 AQIFKKVTSGIKPASLAKV--NDPQ-IKGFIEKCL 238
QI V G L+KV N P+ +K + +CL
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH---- 94
P LQ +EV +L+ + N++ F K + ++T+ +L Y H
Sbjct: 47 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIET 101
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
K IK+I + ARQ G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA
Sbjct: 102 KFEMIKLI-DIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKS 157
Query: 155 QPTA----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ + + G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N
Sbjct: 158 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 217
Query: 207 AQIFKKVTSGIKPASLAKV--NDPQ-IKGFIEKCL 238
QI V G L+KV N P+ +K + +CL
Sbjct: 218 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 252
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH---- 94
P LQ +EV +L+ + N++ F K + ++T+ +L Y H
Sbjct: 73 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIET 127
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
K IK+I + ARQ G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA
Sbjct: 128 KFEMIKLI-DIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKS 183
Query: 155 QPTA----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ + + G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 207 AQIFKKVTSGIKPASLAKV--NDPQ-IKGFIEKCL 238
QI V G L+KV N P+ +K + +CL
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 278
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH---- 94
P LQ +EV +L+ + N++ F K + ++T+ +L Y H
Sbjct: 65 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIET 119
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
K IK+I + ARQ G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA
Sbjct: 120 KFEMIKLI-DIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKS 175
Query: 155 QPTA----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ + + G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N
Sbjct: 176 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 235
Query: 207 AQIFKKVTSGIKPASLAKV--NDPQ-IKGFIEKCL 238
QI V G L+KV N P+ +K + +CL
Sbjct: 236 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 270
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P ++ E+ +L +V FY ++ D + ++ M E G+L Q KK +
Sbjct: 107 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIP 164
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+++ + ++ GL YL + I+HRD+K NI VN + GE+K+ D G++ + A
Sbjct: 165 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 222
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
S +GT +M+PE L Y+ DI+S G+ ++EM YP
Sbjct: 223 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 121/245 (49%), Gaps = 27/245 (11%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNM-------ITELF 82
+KI D+ + +++ + E+ +L V K+Y S++ K + M +L
Sbjct: 53 IKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL 112
Query: 83 TSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
+G +++ I ++IL GL YLHS IHRD+K N+ ++ G+V
Sbjct: 113 RAGPFDEFQ----------IATMLKEILKGLDYLHSEKK--IHRDIKAANVLLS-EQGDV 159
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYP 199
K+ D G+A + Q + +GTP +MAPE+ ++ Y+ DI+S G+ +E+ E P
Sbjct: 160 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
Query: 200 YSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQV 258
S+ +P ++ + P +L K FI+ CL S R +AK+LLK F+ V
Sbjct: 220 NSDM-HPMRVLFLIPKN-NPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI-V 276
Query: 259 ENQKE 263
+N K+
Sbjct: 277 KNSKK 281
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 55 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 115 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEFF 171
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 228
Query: 215 SGIKPASL 222
K +
Sbjct: 229 GNDKQGQM 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH---- 94
P LQ +EV +L+ + N++ F K + ++T+ +L Y H
Sbjct: 45 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIET 99
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
K IK+I + ARQ G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA
Sbjct: 100 KFEMIKLI-DIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKS 155
Query: 155 QPTA----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ + + G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 207 AQIFKKVTSGIKPASLAKV--NDPQ-IKGFIEKCL 238
QI V G L+KV N P+ +K + +CL
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 23 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 78
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F S +L+++ + + +IK++ Q+L GL + HSH ++HRDLK +
Sbjct: 79 KLYLVFE-FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPE 135
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 136 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 188 MCILEMVT 195
EMVT
Sbjct: 195 CIFAEMVT 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P ++ E+ +L +V FY ++ D + ++ M E G+L Q KK +
Sbjct: 45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIP 102
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+++ + ++ GL YL + I+HRD+K NI VN + GE+K+ D G++ + A
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 160
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
S +GT +M+PE L Y+ DI+S G+ ++EM YP
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P ++ E+ +L +V FY ++ D + ++ M E G+L Q KK +
Sbjct: 45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIP 102
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+++ + ++ GL YL + I+HRD+K NI VN + GE+K+ D G++ + A
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 160
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
S +GT +M+PE L Y+ DI+S G+ ++EM YP
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 21 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 76
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F S +L+++ + + +IK++ Q+L GL + HSH ++HRDLK +
Sbjct: 77 KLYLVFE-FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPE 133
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 134 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 188 MCILEMVT 195
EMVT
Sbjct: 193 CIFAEMVT 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P ++ E+ +L +V FY ++ D + ++ M E G+L Q KK +
Sbjct: 45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIP 102
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+++ + ++ GL YL + I+HRD+K NI VN + GE+K+ D G++ + A
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 160
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
S +GT +M+PE L Y+ DI+S G+ ++EM YP
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P ++ E+ +L +V FY ++ D + ++ M E G+L Q KK +
Sbjct: 45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIP 102
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+++ + ++ GL YL + I+HRD+K NI VN + GE+K+ D G++ + A
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 160
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
S +GT +M+PE L Y+ DI+S G+ ++EM YP
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P ++ E+ +L +V FY ++ D + ++ M E G+L Q KK +
Sbjct: 72 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIP 129
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+++ + ++ GL YL + I+HRD+K NI VN + GE+K+ D G++ + A
Sbjct: 130 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 187
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
S +GT +M+PE L Y+ DI+S G+ ++EM YP
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK---- 103
E+ L + N+VK Y + ++ V ++ E G+L Y H +
Sbjct: 52 ELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAEGGSL--YNVLHGAEPLPYYTAAHA 105
Query: 104 -NWARQILHGLVYLHSHNP-PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 161
+W Q G+ YLHS P +IHRDLK N+ + +KI D G A +Q +
Sbjct: 106 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 165
Query: 162 IGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPA-QIFKKVTSGIKP 219
G+ +MAPE++E Y+E D++S+G+ + E++T P+ E PA +I V +G +P
Sbjct: 166 -GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 224
Query: 220 ASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLK 252
+ + P I+ + +C S+R S ++++K
Sbjct: 225 PLIKNLPKP-IESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK---- 103
E+ L + N+VK Y + ++ V ++ E G+L Y H +
Sbjct: 51 ELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAEGGSL--YNVLHGAEPLPYYTAAHA 104
Query: 104 -NWARQILHGLVYLHSHNP-PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 161
+W Q G+ YLHS P +IHRDLK N+ + +KI D G A +Q +
Sbjct: 105 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 164
Query: 162 IGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPA-QIFKKVTSGIKP 219
G+ +MAPE++E Y+E D++S+G+ + E++T P+ E PA +I V +G +P
Sbjct: 165 -GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 223
Query: 220 ASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLK 252
+ + P I+ + +C S+R S ++++K
Sbjct: 224 PLIKNLPKP-IESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 56 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 115
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHR+L NI V N VKIGD GL + Q
Sbjct: 116 KLLQYTSQICKGMEYLGTKR--YIHRNLATRNILVE-NENRVKIGDFGLTKVLPQDKEYY 172
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 173 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 229
Query: 215 SGIKPASL 222
K +
Sbjct: 230 GNDKQGQM 237
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 24/215 (11%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH---- 94
P LQ +EV +L+ + N++ F + ++T+ +L Y H
Sbjct: 45 PQQLQAFKNEVGVLRKTRHVNILLFMGY---STAPQLAIVTQWCEGSSL--YHHLHIIET 99
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
K IK+I + ARQ G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA
Sbjct: 100 KFEMIKLI-DIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKS 155
Query: 155 QPTA----RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ + + G+ +MAPE+ + Y+ D+Y+FG+ + E++T + PYS N
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 207 AQIFKKVTSGIKPASLAKV--NDPQ-IKGFIEKCL 238
QI V G L+KV N P+ +K + +CL
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
Y+AF + G EVA + D + ++ + E L LK N++ V K+
Sbjct: 24 YRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG--VCLKEP 79
Query: 74 TVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN-PPIIHRDLKCDN 132
+ ++ E G L + K + ++ NWA QI G+ YLH PIIHRDLK N
Sbjct: 80 NLCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSN 138
Query: 133 IFV-----NGNHGE--VKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDIY 184
I + NG+ +KI D GLA + T S G +MAPE+ +++ D++
Sbjct: 139 ILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVW 198
Query: 185 SFGMCILEMVTFEYPY 200
S+G+ + E++T E P+
Sbjct: 199 SYGVLLWELLTGEVPF 214
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 122/246 (49%), Gaps = 26/246 (10%)
Query: 30 VKIDDVLQL---PG-DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
VKI DV + PG + L E + LK ++V+ +++ D + M+ E
Sbjct: 54 VKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLYMVFEFMDGA 111
Query: 86 NLRQYRKKHKNVDI----KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNG--NH 139
+L K + V ++ RQIL L Y H +N IIHRD+K +N+ + N
Sbjct: 112 DLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPENVLLASKENS 169
Query: 140 GEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTF 196
VK+GD G+AI + + A +GTP FMAPE+ + E Y + VD++ G+ + +++
Sbjct: 170 APVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
Query: 197 EYPYSECKNPAQIFKKVTSG---IKPASLAKVNDPQIKGFIEKCLV--PASERLSAKDLL 251
P+ K ++F+ + G + P + +++ K + + L+ PA ER++ + L
Sbjct: 230 CLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISE-SAKDLVRRMLMLDPA-ERITVYEAL 285
Query: 252 KDPFLQ 257
P+L+
Sbjct: 286 NHPWLK 291
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 23 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 78
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F S +L+ + + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 79 KLYLVFE-FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 135
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 136 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 188 MCILEMVT 195
EMVT
Sbjct: 195 CIFAEMVT 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 22 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 77
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F S +L+ + + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 78 KLYLVFE-FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 134
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 135 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 188 MCILEMVT 195
EMVT
Sbjct: 194 CIFAEMVT 201
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 16/249 (6%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
Y+A G+EVA + + G +Q++ +EV + LK ++++ Y + D
Sbjct: 28 YRAESIHTGLEVAIKMID-KKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN-- 84
Query: 74 TVNMITELFTSGNLRQYRKKH-KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
V ++ E+ +G + +Y K K +++ QI+ G++YLHSH I+HRDL N
Sbjct: 85 YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSN 142
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEEYNEL-VDIYSFGMC 189
+ + N +KI D GLA ++ P + ++ GTP +++PE+ + L D++S G
Sbjct: 143 LLLTRN-MNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCM 201
Query: 190 ILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLV--PASERLSA 247
++ P+ + K V + + S + + K I + L PA +RLS
Sbjct: 202 FYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSI---EAKDLIHQLLRRNPA-DRLSL 257
Query: 248 KDLLKDPFL 256
+L PF+
Sbjct: 258 SSVLDHPFM 266
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 13/188 (6%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH-KNVDIK 100
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y + H + +D
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI 117
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 118 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 174
Query: 161 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 231
Query: 215 SGIKPASL 222
K +
Sbjct: 232 GNDKQGQM 239
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 27 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 82
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 83 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 139
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPE--LYEEEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE L + Y+ VDI+S G
Sbjct: 140 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLG 198
Query: 188 MCILEMVT 195
EMVT
Sbjct: 199 CIFAEMVT 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 22 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 77
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK +
Sbjct: 78 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPE 134
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 135 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 188 MCILEMVT 195
EMVT
Sbjct: 194 CIFAEMVT 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 20 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 75
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 132
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPE--LYEEEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE L + Y+ VDI+S G
Sbjct: 133 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLG 191
Query: 188 MCILEMVT 195
EMVT
Sbjct: 192 CIFAEMVT 199
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 21 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 76
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK +
Sbjct: 77 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPE 133
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 134 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 188 MCILEMVT 195
EMVT
Sbjct: 193 CIFAEMVT 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 27 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 82
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 83 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 139
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 140 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 198
Query: 188 MCILEMVT 195
EMVT
Sbjct: 199 CIFAEMVT 206
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YK D VA +KI D+ + +++ + E+ +L + +++ S++ K
Sbjct: 36 YKGIDNHTKEVVA---IKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTK- 91
Query: 74 TVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNI 133
+ +I E G+ K ++ I R+IL GL YLHS IHRD+K N+
Sbjct: 92 -LWIIMEYLGGGSALDLLKPGP-LEETYIATILREILKGLDYLHSERK--IHRDIKAANV 147
Query: 134 FVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCI 190
++ G+VK+ D G+A + Q +GTP +MAPE+ ++ Y+ DI+S G+
Sbjct: 148 LLS-EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITA 206
Query: 191 LEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVPASE-RLSAKD 249
+E+ E P S+ +P ++ + P +L + K F+E CL R +AK+
Sbjct: 207 IELAKGEPPNSDL-HPMRVLFLIPKN-SPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKE 264
Query: 250 LLKDPFLQVENQK 262
LLK F+ +K
Sbjct: 265 LLKHKFITRYTKK 277
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 130/259 (50%), Gaps = 21/259 (8%)
Query: 20 FAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMI 78
G EVA VKI D QL LQKL+ EV + K L N+VK ++ V + +KT+ ++
Sbjct: 37 LTGKEVA---VKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 79 TELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
E + G + Y H K + RQI+ + Y H I+HRDLK +N+ ++ +
Sbjct: 92 XEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 139 HGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMAPELYE-EEYN-ELVDIYSFGMCILEMVT 195
+KI D G + + G P + APEL++ ++Y+ VD++S G+ + +V+
Sbjct: 150 XN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 196 FEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ--IKGFIEKCLVPASERLSAKDLLKD 253
P+ + +N ++ ++V G D + +K F+ ++ S+R + + + KD
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFL---ILNPSKRGTLEQIXKD 264
Query: 254 PFLQV---ENQKEPICDPL 269
+ V +++ +P +PL
Sbjct: 265 RWXNVGHEDDELKPYVEPL 283
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 23 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 78
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 79 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 135
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 136 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 188 MCILEMVT 195
EMVT
Sbjct: 195 CIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 22 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 77
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 78 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 134
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 135 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 188 MCILEMVT 195
EMVT
Sbjct: 194 CIFAEMVT 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 22 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 77
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 78 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 134
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 135 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 188 MCILEMVT 195
EMVT
Sbjct: 194 CIFAEMVT 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 24 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 79
Query: 74 TVNMITELFTSGNLRQYRKKHK--NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 80 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 136
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 137 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 195
Query: 188 MCILEMVT 195
EMVT
Sbjct: 196 CIFAEMVT 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 23 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 78
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 79 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 135
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 136 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 188 MCILEMVT 195
EMVT
Sbjct: 195 CIFAEMVT 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 20 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 75
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 132
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 133 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 188 MCILEMVT 195
EMVT
Sbjct: 192 CIFAEMVT 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 20 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 75
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 132
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 133 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 188 MCILEMVT 195
EMVT
Sbjct: 192 CIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 21 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 76
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 77 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 133
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 134 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 188 MCILEMVT 195
EMVT
Sbjct: 193 CIFAEMVT 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 19 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 74
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 75 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 131
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 132 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 188 MCILEMVT 195
EMVT
Sbjct: 191 CIFAEMVT 198
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 21 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 76
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 77 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 133
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 134 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 188 MCILEMVT 195
EMVT
Sbjct: 193 CIFAEMVT 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 20 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 75
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 132
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 133 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 188 MCILEMVT 195
EMVT
Sbjct: 192 CIFAEMVT 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 20 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 75
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 132
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 133 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 188 MCILEMVT 195
EMVT
Sbjct: 192 CIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 19 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 74
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 75 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 131
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 132 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 188 MCILEMVT 195
EMVT
Sbjct: 191 CIFAEMVT 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 24 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 79
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 80 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 136
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 137 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 195
Query: 188 MCILEMVT 195
EMVT
Sbjct: 196 CIFAEMVT 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 20 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 75
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 132
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 133 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 188 MCILEMVT 195
EMVT
Sbjct: 192 CIFAEMVT 199
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 203 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 259
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 163
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 260 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 317
Query: 164 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 216
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 377
Query: 217 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 269
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 378 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 430
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 19 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 74
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 75 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 131
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 132 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 188 MCILEMVT 195
EMVT
Sbjct: 191 CIFAEMVT 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 19 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 74
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 75 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 131
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 132 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 188 MCILEMVT 195
EMVT
Sbjct: 191 CIFAEMVT 198
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 189 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 245
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 163
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 246 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 303
Query: 164 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 216
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363
Query: 217 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 269
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 364 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 416
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 20 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 75
Query: 74 TVNMITELFTSGNLRQYRKKHK--NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 132
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 133 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 188 MCILEMVT 195
EMVT
Sbjct: 192 CIFAEMVT 199
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 20 YKARNKLTGEVVALXKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 75
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 132
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 133 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 188 MCILEMVT 195
EMVT
Sbjct: 192 CIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 19 YKARNKLTGEVVALXKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 74
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 75 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 131
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 132 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 188 MCILEMVT 195
EMVT
Sbjct: 191 CIFAEMVT 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 21 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 76
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 77 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 133
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 134 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 188 MCILEMVT 195
EMVT
Sbjct: 193 CIFAEMVT 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 20 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 75
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+ + + + +IK++ Q+L GL + HSH ++HRDLK +
Sbjct: 76 KLYLVFE-FLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPE 132
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 133 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 188 MCILEMVT 195
EMVT
Sbjct: 192 CIFAEMVT 199
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKV 101
L++ EVH L N+V VD++ ++ E L +Y + H + +
Sbjct: 55 LKRFEREVHNSSQLSHQNIVSMID--VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDT 112
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 158
N+ QIL G+ H+H+ I+HRD+K NI ++ N +KI D G+A A+ + +
Sbjct: 113 AINFTNQILDGI--KHAHDMRIVHRDIKPQNILIDSNKT-LKIFDFGIAKALSETSLTQT 169
Query: 159 RSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYS 201
V+GT ++ +PE + E +E DIYS G+ + EM+ E P++
Sbjct: 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 23 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 78
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+ + + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 79 KLYLVFE-FLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQ 135
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 136 NLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 188 MCILEMVT 195
EMVT
Sbjct: 195 CIFAEMVT 202
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 70 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 126
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 163
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 127 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 184
Query: 164 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 216
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 244
Query: 217 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 269
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 245 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 297
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 63 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 119
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 163
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 120 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 177
Query: 164 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 216
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 237
Query: 217 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 269
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 238 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 290
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 64 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 163
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 164 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 216
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 217 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 269
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 291
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 64 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 163
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 164 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 216
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 217 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 269
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 291
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK V +
Sbjct: 20 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLD--VIHTEN 75
Query: 74 TVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ ++ E F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR--VLHRDLKPQ 132
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYSFG 187
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S G
Sbjct: 133 NLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 188 MCILEMVT 195
EMVT
Sbjct: 192 CIFAEMVT 199
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 64 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 163
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 164 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 216
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 217 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 269
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 291
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNV 97
D QKL E + + LK N+V+ + S ++ ++ +L T G L + R+ +
Sbjct: 46 DHQKLEREARICRLLKHSNIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEA 103
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQ- 154
D + +QIL + LH H ++HRDLK +N+ + VK+ D GLAI +Q
Sbjct: 104 DAS---HCIQQILEAV--LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 158
Query: 155 -QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKK 212
Q GTP +++PE L +E Y + VDI++ G+ IL ++ YP ++ +++++
Sbjct: 159 DQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGV-ILYILLVGYPPFWDEDQHKLYQQ 217
Query: 213 VTSGIK--PASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
+ +G P+ P+ K I + L + ++R++A + LK P++
Sbjct: 218 IKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK D
Sbjct: 23 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLL-----DVIH 75
Query: 74 TVNMITELF--TSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
T N + +F +L+++ + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 76 TENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLK 133
Query: 130 CDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYS 185
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S
Sbjct: 134 PQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWS 192
Query: 186 FGMCILEMVT 195
G EMVT
Sbjct: 193 LGCIFAEMVT 202
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 18/190 (9%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA ++ G VA ++++D + G E+ LLK L N+VK D
Sbjct: 19 YKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLL-----DVIH 71
Query: 74 TVNMITELF--TSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
T N + +F +L+ + + + +IK++ Q+L GL + HSH ++HRDLK
Sbjct: 72 TENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLK 129
Query: 130 CDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EEYNELVDIYS 185
N+ +N G +K+ D GLA A P T + T + APE+ + Y+ VDI+S
Sbjct: 130 PQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWS 188
Query: 186 FGMCILEMVT 195
G EMVT
Sbjct: 189 LGCIFAEMVT 198
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNV 97
D QKL E + + LK N+V+ + S ++ +I +L T G L + R+ +
Sbjct: 64 DHQKLEREARICRLLKHPNIVRLHDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEA 121
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAM-- 153
D + +QIL + LH H ++HRDLK +N+ + VK+ D GLAI +
Sbjct: 122 DAS---HCIQQILEAV--LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG 176
Query: 154 QQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKK 212
+Q GTP +++PE L ++ Y + VD+++ G+ IL ++ YP ++ +++++
Sbjct: 177 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGV-ILYILLVGYPPFWDEDQHRLYQQ 235
Query: 213 VTSGIK--PASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
+ +G P+ P+ K I K L + S+R++A + LK P++
Sbjct: 236 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 81/170 (47%), Gaps = 23/170 (13%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH-KNVDIKV 101
+ EV +++ L+ NV+KF DK+ +N ITE G LR K
Sbjct: 52 RTFLKEVKVMRCLEHPNVLKFIGVLYKDKR--LNFITEYIKGGTLRGIIKSMDSQYPWSQ 109
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPT 157
++A+ I G+ YLHS N IIHRDL N V N V + D GLA M QP
Sbjct: 110 RVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENK-NVVVADFGLARLMVDEKTQPE 166
Query: 158 A------------RSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMV 194
+V+G P +MAPE+ Y+E VD++SFG+ + E++
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 47/281 (16%)
Query: 31 KIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSGN 86
KI + + + ++ E+ +LK K DN++ + + K+V ++ +L S +
Sbjct: 87 KIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-D 145
Query: 87 LRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGD 146
L Q + + ++ ++ + Q+L GL Y+HS +IHRDLK N+ VN N E+KIGD
Sbjct: 146 LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNEN-CELKIGD 202
Query: 147 LGLAIAM------QQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVTFE- 197
G+A + Q + T + APEL EY + +D++S G EM+
Sbjct: 203 FGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
Query: 198 -YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE----KCLVP------------ 240
+P + Q+ V PA + V +++ +I+ + VP
Sbjct: 263 LFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQA 322
Query: 241 -----------ASERLSAKDLLKDPFLQVENQK--EPICDP 268
S R+SA L+ PFL + EP C P
Sbjct: 323 LSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAP 363
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 47/281 (16%)
Query: 31 KIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSGN 86
KI + + + ++ E+ +LK K DN++ + + K+V ++ +L S +
Sbjct: 86 KIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-D 144
Query: 87 LRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGD 146
L Q + + ++ ++ + Q+L GL Y+HS +IHRDLK N+ VN N E+KIGD
Sbjct: 145 LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNEN-CELKIGD 201
Query: 147 LGLAIAM------QQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVTFE- 197
G+A + Q + T + APEL EY + +D++S G EM+
Sbjct: 202 FGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
Query: 198 -YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE----------KCLVPA----- 241
+P + Q+ V PA + V +++ +I+ + + P
Sbjct: 262 LFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQA 321
Query: 242 ------------SERLSAKDLLKDPFLQVENQK--EPICDP 268
S R+SA L+ PFL + EP C P
Sbjct: 322 LSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAP 362
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 24/210 (11%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL--RQYRKKHKNVDI 99
Q+ EV ++ +L N+VK Y + + M+ E G+L R K H +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP-IKW 121
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNG--NHGEV--KIGDLGLAIAMQQ 155
V I G+ Y+ + NPPI+HRDL+ NIF+ + V K+ D GL+ Q
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----Q 177
Query: 156 PTARSV---IGTPEFMAPELY---EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQI 209
+ SV +G ++MAPE EE Y E D YSF M + ++T E P+ E
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 210 FKKVT--SGIKPASLAKVNDPQIKGFIEKC 237
F + G++P ++ + P+++ IE C
Sbjct: 238 FINMIREEGLRP-TIPEDCPPRLRNVIELC 266
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 87/155 (56%), Gaps = 10/155 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E+ +L++L +++VK+ D +K+V ++ E G+LR Y +H V + + +A+
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQ 119
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP----TARSVIG 163
QI G+ YLH+ + IHR L N+ ++ N VKIGD GLA A+ + R
Sbjct: 120 QICEGMAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 176
Query: 164 TPEF-MAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+P F APE L E ++ D++SFG+ + E++T+
Sbjct: 177 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTY 211
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 87/155 (56%), Gaps = 10/155 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E+ +L++L +++VK+ D +K+V ++ E G+LR Y +H V + + +A+
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQ 118
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP----TARSVIG 163
QI G+ YLH+ + IHR L N+ ++ N VKIGD GLA A+ + R
Sbjct: 119 QICEGMAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 175
Query: 164 TPEF-MAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+P F APE L E ++ D++SFG+ + E++T+
Sbjct: 176 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTY 210
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSVI 162
+ QI+ GL +LH N II+RDLK +N+ ++ + G V+I DLGLA+ ++ Q +
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 163 GTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 200
GTP FMAPE L EEY+ VD ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSVI 162
+ QI+ GL +LH N II+RDLK +N+ ++ + G V+I DLGLA+ ++ Q +
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 163 GTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 200
GTP FMAPE L EEY+ VD ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSVI 162
+ QI+ GL +LH N II+RDLK +N+ ++ + G V+I DLGLA+ ++ Q +
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 163 GTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 200
GTP FMAPE L EEY+ VD ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 9/177 (5%)
Query: 44 KLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK 103
K+ E+ LK + +++K Y+ V + M+ E + G L Y K+ +D K +
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQ--VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESR 119
Query: 104 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVI 162
+QIL G+ Y H H ++HRDLK +N+ ++ H KI D GL+ M R
Sbjct: 120 RLFQQILSGVDYCHRHM--VVHRDLKPENVLLDA-HMNAKIADFGLSNMMSDGEFLRXSC 176
Query: 163 GTPEFMAPELYEEEY--NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 217
G+P + APE+ VDI+S G+ + ++ P+ + P +FKK+ GI
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDGI 232
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSVI 162
+ QI+ GL +LH N II+RDLK +N+ ++ + G V+I DLGLA+ ++ Q +
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 163 GTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 200
GTP FMAPE L EEY+ VD ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 9/182 (4%)
Query: 88 RQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 147
+Q K + + ++ A I+ L +LHS +IHRD+K N+ +N G+VK+ D
Sbjct: 141 KQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINA-LGQVKMCDF 198
Query: 148 GLAIAMQQPTARSVIG------TPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYS 201
G++ + A+++ PE + PEL ++ Y+ DI+S G+ ++E+ +PY
Sbjct: 199 GISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
Query: 202 ECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVPAS-ERLSAKDLLKDPFLQVEN 260
P Q K+V P A + F +CL S ER + +L++ PF +
Sbjct: 259 SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 318
Query: 261 QK 262
K
Sbjct: 319 SK 320
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 88/154 (57%), Gaps = 10/154 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E+ +L++L ++++K+ D +K++ ++ E G+LR Y +H ++ + + +A+
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQ 124
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP----TARSVIG 163
QI G+ YLHS + IHR+L N+ ++ N VKIGD GLA A+ + R
Sbjct: 125 QICEGMAYLHSQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 164 TPEF-MAPE-LYEEEYNELVDIYSFGMCILEMVT 195
+P F APE L E ++ D++SFG+ + E++T
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 26/246 (10%)
Query: 30 VKIDDVLQL---PG-DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
VKI DV + PG + L E + LK ++V+ +++ D + M+ E
Sbjct: 56 VKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLYMVFEFMDGA 113
Query: 86 NLRQYRKKHKNVDI----KVIKNWARQILHGLVYLHSHNPPIIHRDLK--CDNIFVNGNH 139
+L K + V ++ RQIL L Y H +N IIHRD+K C + N
Sbjct: 114 DLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENS 171
Query: 140 GEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTF 196
VK+G G+AI + + A +GTP FMAPE+ + E Y + VD++ G+ + +++
Sbjct: 172 APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
Query: 197 EYPYSECKNPAQIFKKVTSG---IKPASLAKVNDPQIKGFIEKCLV--PASERLSAKDLL 251
P+ K ++F+ + G + P + +++ K + + L+ PA ER++ + L
Sbjct: 232 CLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISE-SAKDLVRRMLMLDPA-ERITVYEAL 287
Query: 252 KDPFLQ 257
P+L+
Sbjct: 288 NHPWLK 293
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNV 97
D QKL E + + LK N+V+ + S ++ +I +L T G L + R+ +
Sbjct: 53 DHQKLEREARICRLLKHPNIVRLHDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEA 110
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAM-- 153
D + +QIL + LH H ++HR+LK +N+ + VK+ D GLAI +
Sbjct: 111 DAS---HCIQQILEAV--LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165
Query: 154 QQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKK 212
+Q GTP +++PE L ++ Y + VD+++ G+ IL ++ YP ++ +++++
Sbjct: 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGV-ILYILLVGYPPFWDEDQHRLYQQ 224
Query: 213 VTSGIK--PASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
+ +G P+ P+ K I K L + S+R++A + LK P++
Sbjct: 225 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 13/180 (7%)
Query: 25 VAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTS 84
VA RV++DD + G E+ LLK LK N+V+ + DKK T ++ E F
Sbjct: 30 VALKRVRLDDDDE--GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT--LVFE-FCD 84
Query: 85 GNLRQYRKK-HKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L++Y + ++D +++K++ Q+L GL + HS N ++HRDLK N+ +N N GE+K
Sbjct: 85 QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRN-GELK 141
Query: 144 IGDLGLAIAMQQPTA--RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVTFEYP 199
+ D GLA A P + + T + P++ + Y+ +D++S G E+ P
Sbjct: 142 LADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNV 97
D QKL E + + LK N+V+ + S ++ ++ +L T G L + R+ +
Sbjct: 73 DHQKLEREARICRLLKHPNIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEA 130
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAMQ- 154
D + QIL + ++H H+ I+HRDLK +N+ + VK+ D GLAI +Q
Sbjct: 131 DAS---HCIHQILESVNHIHQHD--IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 185
Query: 155 -QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKK 212
Q GTP +++PE L ++ Y + VDI++ G+ IL ++ YP ++ +++++
Sbjct: 186 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGV-ILYILLVGYPPFWDEDQHKLYQQ 244
Query: 213 VTSGIK--PASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
+ +G P+ P+ K I + L + ++R++A LK P++
Sbjct: 245 IKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 26/246 (10%)
Query: 30 VKIDDVLQL---PG-DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
VKI DV + PG + L E + LK ++V+ +++ D + M+ E
Sbjct: 54 VKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLYMVFEFMDGA 111
Query: 86 NLRQYRKKHKNVDI----KVIKNWARQILHGLVYLHSHNPPIIHRDLK--CDNIFVNGNH 139
+L K + V ++ RQIL L Y H +N IIHRD+K C + N
Sbjct: 112 DLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENS 169
Query: 140 GEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTF 196
VK+G G+AI + + A +GTP FMAPE+ + E Y + VD++ G+ + +++
Sbjct: 170 APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
Query: 197 EYPYSECKNPAQIFKKVTSG---IKPASLAKVNDPQIKGFIEKCLV--PASERLSAKDLL 251
P+ K ++F+ + G + P + +++ K + + L+ PA ER++ + L
Sbjct: 230 CLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISE-SAKDLVRRMLMLDPA-ERITVYEAL 285
Query: 252 KDPFLQ 257
P+L+
Sbjct: 286 NHPWLK 291
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 114/224 (50%), Gaps = 14/224 (6%)
Query: 41 DLQ-KLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
D+Q ++ E+ L+ L+ +++K Y V K + M+ E + L Y + +
Sbjct: 56 DMQGRIEREISYLRLLRHPHIIKLYD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSE 112
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-A 158
+ + + +QI+ + Y H H I+HRDLK +N+ ++ H VKI D GL+ M
Sbjct: 113 QEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFL 169
Query: 159 RSVIGTPEFMAPELYEEEY--NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++ G+P + APE+ + VD++S G+ + M+ P+ + P +FK +++G
Sbjct: 170 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNG 228
Query: 217 IKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
+ +L K P G I++ L V R+S ++++D + +V+
Sbjct: 229 V--YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 270
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR-- 159
I+ RQ+L L +LHS IIHRDLK N+ + G++++ D G++ + +
Sbjct: 119 IQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRD 175
Query: 160 SVIGTPEFMAPELYEEE------YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
S IGTP +MAPE+ E Y+ DI+S G+ ++EM E P+ E NP ++ K+
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKI 234
Query: 214 TSGIKPASLAKVN-DPQIKGFIEKCLVPASE-RLSAKDLLKDPFL 256
P L + + F++ L E R SA LL+ PF+
Sbjct: 235 AKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 114/224 (50%), Gaps = 14/224 (6%)
Query: 41 DLQ-KLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
D+Q ++ E+ L+ L+ +++K Y V K + M+ E + L Y + +
Sbjct: 50 DMQGRIEREISYLRLLRHPHIIKLYD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSE 106
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-A 158
+ + + +QI+ + Y H H I+HRDLK +N+ ++ H VKI D GL+ M
Sbjct: 107 QEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFL 163
Query: 159 RSVIGTPEFMAPELYEEEY--NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++ G+P + APE+ + VD++S G+ + M+ P+ + P +FK +++G
Sbjct: 164 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNG 222
Query: 217 IKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
+ +L K P G I++ L V R+S ++++D + +V+
Sbjct: 223 V--YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 264
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 114/224 (50%), Gaps = 14/224 (6%)
Query: 41 DLQ-KLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
D+Q ++ E+ L+ L+ +++K Y V K + M+ E + L Y + +
Sbjct: 55 DMQGRIEREISYLRLLRHPHIIKLYD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSE 111
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-A 158
+ + + +QI+ + Y H H I+HRDLK +N+ ++ H VKI D GL+ M
Sbjct: 112 QEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFL 168
Query: 159 RSVIGTPEFMAPELYEEEY--NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++ G+P + APE+ + VD++S G+ + M+ P+ + P +FK +++G
Sbjct: 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNG 227
Query: 217 IKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
+ +L K P G I++ L V R+S ++++D + +V+
Sbjct: 228 V--YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL--RQYRKKHKNVDI 99
Q+ EV ++ +L N+VK Y + + M+ E G+L R K H +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP-IKW 121
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR 159
V I G+ Y+ + NPPI+HRDL+ NIF+ + ++ Q +
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH 181
Query: 160 SV---IGTPEFMAPELY---EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
SV +G ++MAPE EE Y E D YSF M + ++T E P+ E F +
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241
Query: 214 T--SGIKPASLAKVNDPQIKGFIEKC 237
G++P ++ + P+++ IE C
Sbjct: 242 IREEGLRP-TIPEDCPPRLRNVIELC 266
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 22 GIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITE 80
G+E A KI + +L D QKL E + + L+ N+V+ + S ++ ++ +
Sbjct: 54 GLEFA---AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY--LVFD 108
Query: 81 LFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV-- 135
L T G L + R+ + D + +QIL + Y HS+ I+HR+LK +N+ +
Sbjct: 109 LVTGGELFEDIVAREFYSEAD---ASHCIQQILESIAYCHSNG--IVHRNLKPENLLLAS 163
Query: 136 NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEM 193
VK+ D GLAI + A GTP +++PE+ +++ Y++ VDI++ G+ IL +
Sbjct: 164 KAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV-ILYI 222
Query: 194 VTFEYPYSECKNPAQIFKKVTSGI--KPASLAKVNDPQIKGFIEKCL-VPASERLSAKDL 250
+ YP ++ +++ ++ +G P+ P+ K I+ L V +R++A
Sbjct: 223 LLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 282
Query: 251 LKDPFL 256
LK P++
Sbjct: 283 LKVPWI 288
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 23/230 (10%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGN----LRQYRKKHKN 96
+L+ E+ +L + +VK ++ D K + ++ E G + + +
Sbjct: 51 ELEDYIVEIEILATCDHPYIVKLLGAYYHDGK--LWIMIEFCPGGAVDAIMLELDRGLTE 108
Query: 97 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
I+V+ RQ+L L +LHS IIHRDLK N+ + G++++ D G++ +
Sbjct: 109 PQIQVV---CRQMLEALNFLHSKR--IIHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKT 162
Query: 157 TAR--SVIGTPEFMAPELYEEE------YNELVDIYSFGMCILEMVTFEYPYSECKNPAQ 208
+ S IGTP +MAPE+ E Y+ DI+S G+ ++EM E P+ E NP +
Sbjct: 163 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMR 221
Query: 209 IFKKVTSGIKPASLAKVN-DPQIKGFIEKCLVPASE-RLSAKDLLKDPFL 256
+ K+ P L + + F++ L E R SA LL+ PF+
Sbjct: 222 VLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 114/224 (50%), Gaps = 14/224 (6%)
Query: 41 DLQ-KLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
D+Q ++ E+ L+ L+ +++K Y V K + M+ E + L Y + +
Sbjct: 46 DMQGRIEREISYLRLLRHPHIIKLYD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSE 102
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-A 158
+ + + +QI+ + Y H H I+HRDLK +N+ ++ H VKI D GL+ M
Sbjct: 103 QEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFL 159
Query: 159 RSVIGTPEFMAPELYEEEY--NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++ G+P + APE+ + VD++S G+ + M+ P+ + P +FK +++G
Sbjct: 160 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNG 218
Query: 217 IKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVE 259
+ +L K P G I++ L V R+S ++++D + +V+
Sbjct: 219 V--YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 260
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 88/154 (57%), Gaps = 10/154 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E+ +L++L ++++K+ D +K++ ++ E G+LR Y +H ++ + + +A+
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQ 124
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP----TARSVIG 163
QI G+ YLH+ + IHR+L N+ ++ N VKIGD GLA A+ + R
Sbjct: 125 QICEGMAYLHAQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 164 TPEF-MAPE-LYEEEYNELVDIYSFGMCILEMVT 195
+P F APE L E ++ D++SFG+ + E++T
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G++ + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Query: 88 RQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 147
+Q K + + ++ A I+ L +LHS +IHRD+K N+ +N G+VK+ D
Sbjct: 97 KQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINA-LGQVKMCDF 154
Query: 148 GLAIAMQQPTARSVIG------TPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYS 201
G++ + A+ + PE + PEL ++ Y+ DI+S G+ ++E+ +PY
Sbjct: 155 GISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
Query: 202 ECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVPAS-ERLSAKDLLKDPFLQVEN 260
P Q K+V P A + F +CL S ER + +L++ PF +
Sbjct: 215 SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274
Query: 261 QK 262
K
Sbjct: 275 SK 276
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G++ + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 116/226 (51%), Gaps = 18/226 (7%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNV 97
D QKL E + + L+ N+V+ + S ++ ++ +L T G L + R+ +
Sbjct: 48 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEA 105
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQ 155
D + +QIL + Y HS+ I+HR+LK +N+ + VK+ D GLAI +
Sbjct: 106 D---ASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160
Query: 156 PTA-RSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
A GTP +++PE+ +++ Y++ VDI++ G+ IL ++ YP ++ +++ ++
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQI 219
Query: 214 TSGI--KPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
+G P+ P+ K I+ L V +R++A LK P++
Sbjct: 220 KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL--RQYRKKHKNVDI 99
Q+ EV ++ +L N+VK Y + + M+ E G+L R K H +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP-IKW 121
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNG--NHGEV--KIGDLGLAIAMQQ 155
V I G+ Y+ + NPPI+HRDL+ NIF+ + V K+ D G + Q
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----Q 177
Query: 156 PTARSV---IGTPEFMAPELY---EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQI 209
+ SV +G ++MAPE EE Y E D YSF M + ++T E P+ E
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 210 FKKVT--SGIKPASLAKVNDPQIKGFIEKC 237
F + G++P ++ + P+++ IE C
Sbjct: 238 FINMIREEGLRP-TIPEDCPPRLRNVIELC 266
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 116/226 (51%), Gaps = 18/226 (7%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNV 97
D QKL E + + L+ N+V+ + S ++ ++ +L T G L + R+ +
Sbjct: 48 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEA 105
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQ 155
D + +QIL + Y HS+ I+HR+LK +N+ + VK+ D GLAI +
Sbjct: 106 D---ASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160
Query: 156 PTA-RSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
A GTP +++PE+ +++ Y++ VDI++ G+ IL ++ YP ++ +++ ++
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQI 219
Query: 214 TSGI--KPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
+G P+ P+ K I+ L V +R++A LK P++
Sbjct: 220 KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 116/226 (51%), Gaps = 18/226 (7%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNV 97
D QKL E + + L+ N+V+ + S ++ ++ +L T G L + R+ +
Sbjct: 47 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEA 104
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQ 155
D + +QIL + Y HS+ I+HR+LK +N+ + VK+ D GLAI +
Sbjct: 105 D---ASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 159
Query: 156 PTA-RSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
A GTP +++PE+ +++ Y++ VDI++ G+ IL ++ YP ++ +++ ++
Sbjct: 160 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQI 218
Query: 214 TSGI--KPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
+G P+ P+ K I+ L V +R++A LK P++
Sbjct: 219 KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIK 100
+++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 84 EIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRFSEP 141
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D GLA ++ T
Sbjct: 142 HARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGLAKRVKGRTW-X 197
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 10/154 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E+ +L++L ++++K+ D ++ ++ E G+LR Y +H ++ + + +A+
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQ 141
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP----TARSVIG 163
QI G+ YLH+ + IHRDL N+ ++ N VKIGD GLA A+ + R
Sbjct: 142 QICEGMAYLHAQH--YIHRDLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 164 TPEF-MAPE-LYEEEYNELVDIYSFGMCILEMVT 195
+P F APE L E ++ D++SFG+ + E++T
Sbjct: 199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 12/184 (6%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P + E+ +LK+L D +VK+ ++++ ++ E SG LR + ++H+ +
Sbjct: 52 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL 111
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 157
D + ++ QI G+ YL S +HRDL NI V + VKI D GLA +
Sbjct: 112 DASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDK 168
Query: 158 ARSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK 211
V+ P + APE L + ++ D++SFG+ + E+ F Y C A+ +
Sbjct: 169 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL--FTYCDKSCSPSAEFLR 226
Query: 212 KVTS 215
+ S
Sbjct: 227 MMGS 230
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 6/132 (4%)
Query: 72 KKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
K+ + + E G+L + + D+ +A +I+ GL +LHS I++RDLK D
Sbjct: 90 KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLD 147
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPE-LYEEEYNELVDIYSFGM 188
NI ++ + G +KI D G+ A++ GTP+++APE L ++YN VD +SFG+
Sbjct: 148 NILLDKD-GHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGV 206
Query: 189 CILEMVTFEYPY 200
+ EM+ + P+
Sbjct: 207 LLYEMLIGQSPF 218
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 8/158 (5%)
Query: 60 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 119
+++ + ++ D ++ + MI + G L +K + V K +A ++ L YLHS
Sbjct: 68 IIRMWGTFQDAQQ--IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 125
Query: 120 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YN 178
+ II+RDLK +NI ++ N G +KI D G A + T + GTP+++APE+ + YN
Sbjct: 126 D--IIYRDLKPENILLDKN-GHIKITDFGFAKYVPDVTY-XLCGTPDYIAPEVVSTKPYN 181
Query: 179 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
+ +D +SFG+ I EM+ P+ + N + ++K+ +
Sbjct: 182 KSIDWWSFGILIYEMLAGYTPFYDS-NTMKTYEKILNA 218
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 168
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T ++ GTPE
Sbjct: 169 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGATW-TLCGTPE 224
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 274
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 6/132 (4%)
Query: 72 KKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
K+ + + E G+L + + D+ +A +I+ GL +LHS I++RDLK D
Sbjct: 91 KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLD 148
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPE-LYEEEYNELVDIYSFGM 188
NI ++ + G +KI D G+ A++ GTP+++APE L ++YN VD +SFG+
Sbjct: 149 NILLDKD-GHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGV 207
Query: 189 CILEMVTFEYPY 200
+ EM+ + P+
Sbjct: 208 LLYEMLIGQSPF 219
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P + E+ +LK+L D +VK+ ++++ ++ E SG LR + ++H+ +
Sbjct: 53 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL 112
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 157
D + ++ QI G+ YL S +HRDL NI V + VKI D GLA +
Sbjct: 113 DASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDK 169
Query: 158 ARSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
V+ P + APE L + ++ D++SFG+ + E+ T+
Sbjct: 170 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 214
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDI 99
D Q+ E+ +LK+L D +VK+ ++++ ++ E SG LR + ++H+ +D
Sbjct: 70 DFQR---EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA 126
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR 159
+ ++ QI G+ YL S +HRDL NI V + VKI D GLA +
Sbjct: 127 SRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDY 183
Query: 160 SVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
V+ P + APE L + ++ D++SFG+ + E+ T+
Sbjct: 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 226
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 115/236 (48%), Gaps = 10/236 (4%)
Query: 29 RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
+V L+ G +L EV + L+ N+++ Y + D + V +I E G +
Sbjct: 43 KVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY 100
Query: 89 QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLG 148
+ +K D + + ++ + L Y HS +IHRD+K +N+ + G++GE+KI D G
Sbjct: 101 RELQKLSRFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSNGELKIADFG 157
Query: 149 LAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPA 207
++ ++ GT +++ PE+ E ++E VD++S G+ E + P+ E
Sbjct: 158 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-EAHTYQ 216
Query: 208 QIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 262
+ +++++ + + I + L AS+RL+ ++L+ P+++ + K
Sbjct: 217 ETYRRISR--VEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSK 270
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 13/180 (7%)
Query: 25 VAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTS 84
VA RV++DD + G E+ LLK LK N+V+ + DKK T ++ E F
Sbjct: 30 VALKRVRLDDDDE--GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT--LVFE-FCD 84
Query: 85 GNLRQYRKK-HKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L++Y + ++D +++K++ Q+L GL + HS N ++HRDLK N+ +N N GE+K
Sbjct: 85 QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRN-GELK 141
Query: 144 IGDLGLAIAMQQPTA--RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVTFEYP 199
+ + GLA A P + + T + P++ + Y+ +D++S G E+ P
Sbjct: 142 LANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 115/236 (48%), Gaps = 10/236 (4%)
Query: 29 RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
+V L+ G +L EV + L+ N+++ Y + D + V +I E G +
Sbjct: 43 KVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVY 100
Query: 89 QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLG 148
+ +K D + + ++ + L Y HS +IHRD+K +N+ + G++GE+KI D G
Sbjct: 101 RELQKLSRFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSNGELKIADFG 157
Query: 149 LAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPA 207
++ ++ GT +++ PE+ E ++E VD++S G+ E + P+ E
Sbjct: 158 WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-EAHTYQ 216
Query: 208 QIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 262
+ +++++ + + I + L AS+RL+ ++L+ P+++ + K
Sbjct: 217 ETYRRISR--VEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSK 270
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P + E+ +LK+L D +VK+ + + ++ E SG LR + ++H+ +
Sbjct: 49 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL 108
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 157
D + ++ QI G+ YL S +HRDL NI V + VKI D GLA +
Sbjct: 109 DASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDK 165
Query: 158 ARSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
V+ P + APE L + ++ D++SFG+ + E+ T+
Sbjct: 166 DXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 210
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIK 100
+++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 84 EIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRFSEP 141
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 160
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D GLA ++ T
Sbjct: 142 HARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIQVTDFGLAKRVKGRTW-X 197
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 91/166 (54%), Gaps = 10/166 (6%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
+++ ++ E+ +++ L+ +V + S+ D++ + M+ +L G+LR + +++ +
Sbjct: 57 NEVRNVFKELQIMQGLEHPFLVNLWYSFQDEED--MFMVVDLLLGGDLRYHLQQNVHFKE 114
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR 159
+ +K + +++ L YL N IIHRD+K DNI ++ HG V I D +A + + T
Sbjct: 115 ETVKLFICELVMALDYLQ--NQRIIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQI 171
Query: 160 SVI-GTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPY 200
+ + GT +MAPE++ Y+ VD +S G+ E++ PY
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNV 97
D QKL E + + LK N+V+ + S ++ ++ +L T G L + R+ +
Sbjct: 46 DHQKLEREARICRLLKHPNIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEA 103
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQ- 154
D + +QIL + H H I+HRDLK +N+ + VK+ D GLAI +Q
Sbjct: 104 DAS---HCIQQILESVN--HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG 158
Query: 155 -QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKK 212
Q GTP +++PE L ++ Y + VD+++ G+ IL ++ YP ++ +++++
Sbjct: 159 DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQ 217
Query: 213 VTSGIK--PASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
+ +G P+ P+ K I K L + ++R++A + LK P++
Sbjct: 218 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNV 97
D QKL E + + LK N+V+ + S ++ ++ +L T G L + R+ +
Sbjct: 46 DHQKLEREARICRLLKHPNIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEA 103
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQ- 154
D + +QIL + H H I+HRDLK +N+ + VK+ D GLAI +Q
Sbjct: 104 DAS---HCIQQILESVN--HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG 158
Query: 155 -QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKK 212
Q GTP +++PE L ++ Y + VD+++ G+ IL ++ YP ++ +++++
Sbjct: 159 DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQ 217
Query: 213 VTSGIK--PASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
+ +G P+ P+ K I K L + ++R++A + LK P++
Sbjct: 218 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLAGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T ++ GTPE
Sbjct: 149 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-TLCGTPE 204
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 148
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 149 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 204
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 76 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 133
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T ++ GTPE
Sbjct: 134 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-TLCGTPE 189
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLXGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 168
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 169 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 224
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 274
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGT 164
+A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T + GT
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRTW-XLCGT 202
Query: 165 PEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
PE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T + GTPE
Sbjct: 149 AQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTW-XLCGTPE 204
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADEPIQIYEKIVSG 253
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLIID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 72 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 129
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 130 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 186
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 187 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 245
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 134
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 135 AQIVLTFEYLHSLD--LIYRDLKPENLLID-EQGYIQVTDFGFAKRVKGRTW-XLCGTPE 190
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 240
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 142
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 143 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 198
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 248
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 168
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 169 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 224
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 274
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 149 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 204
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 149 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 204
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 140
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 141 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 196
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 246
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E+ LLK L+ +N+V + V KKK ++ E L +D +V++ +
Sbjct: 74 EIKLLKQLRHENLVNLLE--VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF 131
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTP 165
QI++G+ + HSHN IIHRD+K +NI V+ + G VK+ D G A + P + T
Sbjct: 132 QIINGIGFCHSHN--IIHRDIKPENILVSQS-GVVKLCDFGFARTLAAPGEVYDDEVATR 188
Query: 166 EFMAPELY--EEEYNELVDIYSFGMCILEMVTFE 197
+ APEL + +Y + VD+++ G + EM E
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 51 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPRGEVYKELQKLS 108
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 109 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 165
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 149 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 204
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 10/171 (5%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
+Q G ++++Y E+ +LK L NVVK + D + + M+ EL G + + K
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLK 132
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
+ + + + ++ G+ YLH IIHRD+K N+ V G G +KI D G++ +
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLV-GEDGHIKIADFGVSNEFKG 189
Query: 156 PTA--RSVIGTPEFMAPELYEEEY----NELVDIYSFGMCILEMVTFEYPY 200
A + +GTP FMAPE E + +D+++ G+ + V + P+
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 44 KLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK 103
K+ E+ LK + +++K Y+ V M+ E + G L Y KH V+ +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR 114
Query: 104 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVI 162
+QIL + Y H H ++HRDLK +N+ ++ H KI D GL+ M R+
Sbjct: 115 RLFQQILSAVDYCHRHM--VVHRDLKPENVLLDA-HMNAKIADFGLSNMMSDGEFLRTSC 171
Query: 163 GTPEFMAPELYEEEY--NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 217
G+P + APE+ VDI+S G+ + ++ P+ + P +FKK+ G+
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-LFKKIRGGV 227
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 149 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 204
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
+V + L D ++ KFYK +D K + + ++ A
Sbjct: 107 DVWICXELXDTSLDKFYKQVID-----------------------KGQTIPEDILGKIAV 143
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV------ 161
I+ L +LHS +IHRD+K N+ +N G+VK D G++ + A+ +
Sbjct: 144 SIVKALEHLHS-KLSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGCKP 201
Query: 162 IGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPAS 221
PE + PEL ++ Y+ DI+S G+ +E+ +PY P Q K+V P
Sbjct: 202 YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 261
Query: 222 LAKVNDPQIKGFIEKCLVPAS-ERLSAKDLLKDPFLQVENQK 262
A + F +CL S ER + +L + PF + K
Sbjct: 262 PADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESK 303
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA 140
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 141 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 196
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 246
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
M+ E G + + ++ + +A QI+ YLHS + +I+RDLK +N+ ++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID 176
Query: 137 GNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVT 195
G +K+ D G A ++ T + GTPE++APE + + YN+ VD ++ G+ I EM
Sbjct: 177 -QQGYIKVTDFGFAKRVKGRTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 196 FEYPYSECKNPAQIFKKVTSG 216
YP P QI++K+ SG
Sbjct: 235 -GYPPFFADQPIQIYEKIVSG 254
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
M+ E G + + ++ + +A QI+ YLHS + +I+RDLK +N+ ++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID 176
Query: 137 GNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVT 195
G +K+ D G A ++ T + GTPE++APE + + YN+ VD ++ G+ I EM
Sbjct: 177 -QQGYIKVTDFGFAKRVKGRTW-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 196 FEYPYSECKNPAQIFKKVTSG 216
YP P QI++K+ SG
Sbjct: 235 -GYPPFFADQPIQIYEKIVSG 254
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 49 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 106
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 163
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 164 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 46 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 103
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 160
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 161 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I +M YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 63 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 120
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 121 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 177
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 178 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 236
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA 148
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 149 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 204
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGT 164
+A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T + GT
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRTW-XLCGT 202
Query: 165 PEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
PE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 51 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 108
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 109 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 165
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 49 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 106
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 163
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 10/189 (5%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDD 70
+ YKA D +G VA V++ + + LP + + + L++ + NVV+
Sbjct: 19 TVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 78
Query: 71 KKKTVNMITELF--TSGNLRQYRKKHK--NVDIKVIKNWARQILHGLVYLHSHNPPIIHR 126
+ +T +F +LR Y K + + IK+ RQ L GL +LH++ I+HR
Sbjct: 79 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHR 136
Query: 127 DLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIY 184
DLK +NI V G VK+ D GLA I Q V+ T + APE L + Y VD++
Sbjct: 137 DLKPENILVTSG-GTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMW 195
Query: 185 SFGMCILEM 193
S G EM
Sbjct: 196 SVGCIFAEM 204
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 13/192 (6%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQ----LPGDLQKLYSEVHLLKSLKDDNVVKFYKSW 67
+ YKA D +G VA V++ + LP + + + L++ + NVV+
Sbjct: 24 TVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC 83
Query: 68 VDDKKKTVNMITELF--TSGNLRQYRKKHK--NVDIKVIKNWARQILHGLVYLHSHNPPI 123
+ +T +F +LR Y K + + IK+ RQ L GL +LH++ I
Sbjct: 84 ATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--I 141
Query: 124 IHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEEYNELV 181
+HRDLK +NI V G VK+ D GLA I Q V+ T + APE L + Y V
Sbjct: 142 VHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPV 200
Query: 182 DIYSFGMCILEM 193
D++S G EM
Sbjct: 201 DMWSVGCIFAEM 212
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 17/190 (8%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK 72
YKA D VA R++++ + +PG + EV LLK L+ N+++ KS +
Sbjct: 51 YKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR---EVSLLKELQHRNIIEL-KSVIHHNH 106
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
+ +++I E + +L++Y K+ +V ++VIK++ Q+++G+ + HS +HRDLK N
Sbjct: 107 R-LHLIFE-YAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQN 162
Query: 133 IFVNGNHGE----VKIGDLGLAIAMQQPTARSV--IGTPEFMAPE--LYEEEYNELVDIY 184
+ ++ + +KIGD GLA A P + I T + PE L Y+ VDI+
Sbjct: 163 LLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIW 222
Query: 185 SFGMCILEMV 194
S EM+
Sbjct: 223 SIACIWAEML 232
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 50 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 107
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 108 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 164
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 165 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 223
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 51 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPRGEVYKELQKLS 108
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 109 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 165
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 166 SRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-XELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 22/231 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 48 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 106 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 161
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG---TPEFMAPELYEE--EYNELVDIYSF 186
N+ VN + E+KI D GLA + TA + G T + APE+ YN+ VDI+S
Sbjct: 162 NLAVNED-CELKILDFGLA----RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216
Query: 187 GMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 217 GCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 43 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 101 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 156
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 157 NLAVNED-SELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 45 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 102
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 103 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 159
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 160 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 44 KLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK 103
K+ E+ LK + +++K Y+ V M+ E + G L Y KH V+ +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR 114
Query: 104 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVI 162
+QIL + Y H H ++HRDLK +N+ ++ H KI D GL+ M R
Sbjct: 115 RLFQQILSAVDYCHRHM--VVHRDLKPENVLLDA-HMNAKIADFGLSNMMSDGEFLRDSC 171
Query: 163 GTPEFMAPELYEEEY--NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 217
G+P + APE+ VDI+S G+ + ++ P+ + P +FKK+ G+
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-LFKKIRGGV 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 22/231 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 48 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 106 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 161
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG---TPEFMAPELYEE--EYNELVDIYSF 186
N+ VN + E+KI D GLA + TA + G T + APE+ YN+ VDI+S
Sbjct: 162 NLAVNED-CELKILDFGLA----RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216
Query: 187 GMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 217 GCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 72 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 129
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 130 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 186
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 187 SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 245
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 46 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 103
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 160
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 47 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 104
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 105 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 161
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 162 SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 22/231 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 48 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 106 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 161
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG---TPEFMAPELYEE--EYNELVDIYSF 186
N+ VN + E+KI D GLA + TA + G T + APE+ YN+ VDI+S
Sbjct: 162 NLAVNED-CELKILDFGLA----RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216
Query: 187 GMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 217 GCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 46 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 103
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 160
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 161 SRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 161
+ + R L L +LHS ++H D+K NIF+ G G K+GD GL + + A V
Sbjct: 159 VWGYLRDTLLALAHLHSQG--LVHLDVKPANIFL-GPRGRCKLGDFGLLVELGTAGAGEV 215
Query: 162 I-GTPEFMAPELYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIKP 219
G P +MAPEL + Y D++S G+ ILE+ E P+ + ++++ G P
Sbjct: 216 QEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHG-----GEGWQQLRQGYLP 270
Query: 220 ASLAKVNDPQIKGFIEKCLVPASE-RLSAKDLLKDPFLQ 257
+++ + L P + R +A+ LL P L+
Sbjct: 271 PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLR 309
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 47 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 105 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 160
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 161 NLAVNED-SELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 10/189 (5%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDD 70
+ YKA D +G VA V++ + + LP + + + L++ + NVV+
Sbjct: 19 TVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 78
Query: 71 KKKTVNMITELF--TSGNLRQYRKKHK--NVDIKVIKNWARQILHGLVYLHSHNPPIIHR 126
+ +T +F +LR Y K + + IK+ RQ L GL +LH++ I+HR
Sbjct: 79 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHR 136
Query: 127 DLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIY 184
DLK +NI V G VK+ D GLA I Q V+ T + APE L + Y VD++
Sbjct: 137 DLKPENILVTSG-GTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMW 195
Query: 185 SFGMCILEM 193
S G EM
Sbjct: 196 SVGCIFAEM 204
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 48 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 105
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 106 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 162
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 163 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 221
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE L YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 10/189 (5%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDD 70
+ YKA D +G VA V++ + + LP + + + L++ + NVV+
Sbjct: 19 TVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 78
Query: 71 KKKTVNMITELF--TSGNLRQYRKKHK--NVDIKVIKNWARQILHGLVYLHSHNPPIIHR 126
+ +T +F +LR Y K + + IK+ RQ L GL +LH++ I+HR
Sbjct: 79 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHR 136
Query: 127 DLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIY 184
DLK +NI V G VK+ D GLA I Q V+ T + APE L + Y VD++
Sbjct: 137 DLKPENILVTSG-GTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMW 195
Query: 185 SFGMCILEM 193
S G EM
Sbjct: 196 SVGCIFAEM 204
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 51 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 108
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 109 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 165
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 166 SRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 2 VLTGLYMTPFSSYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV 61
V +G Y + SSY D +G+++A K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 59 VGSGAYGSVCSSY---DVKSGLKIAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVI 113
Query: 62 K----FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH 117
F + ++ V ++T L +L K K D V + QIL GL Y+H
Sbjct: 114 GLLDVFTPATSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIH 171
Query: 118 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE-- 175
S + IIHRDLK N+ VN + E+KI D GLA + T + APE+
Sbjct: 172 SAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWM 227
Query: 176 EYNELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASL 222
YN VDI+S G + E++T +P ++ N Q ++T G PAS+
Sbjct: 228 HYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLT-GTPPASV 275
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 49 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 106
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 163
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 133/301 (44%), Gaps = 45/301 (14%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA A + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP------ASLAKVN--- 226
+ E++T +P ++ P A++ KK++S A + K+N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 272
Query: 227 -----DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICDPLKLPIQSLKM 278
+P +EK LV S++ +A+ L F Q + EP+ DP +S +
Sbjct: 273 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDL 332
Query: 279 L 279
L
Sbjct: 333 L 333
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
+APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 8/171 (4%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
+E +L+++ +VK S+ D+ + M+ E G + + ++ + +A
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE 166
QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T + GTPE
Sbjct: 148 AQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRTW-XLCGTPE 203
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
++AP + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 51 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 108
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 109 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 165
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 166 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 43 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 100
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 101 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 157
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 158 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 53 AFDTKTGLRVAVK--KLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 110
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 111 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 166
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 167 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 53 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 110
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 111 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 166
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 167 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 53 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 110
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 111 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 166
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 167 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 47 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 104
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 105 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 161
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 162 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 46 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 103
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 160
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 12/237 (5%)
Query: 29 RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
+V L+ G +L E+ + L+ N+++ Y + D +K + ++ E G L
Sbjct: 45 KVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELY 102
Query: 89 QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLG 148
+ +KH D + + ++ L Y H +IHRD+K +N+ + G GE+KI D G
Sbjct: 103 KELQKHGRFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLM-GYKGELKIADFG 159
Query: 149 LAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPA 207
++ R + GT +++ PE+ E + ++E VD++ G+ E + P+ +
Sbjct: 160 WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
Query: 208 QIFKKVTSGIK-PASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVENQK 262
+ V +K P L+ + K I K L +RL K +++ P+++ +++
Sbjct: 220 THRRIVNVDLKFPPFLSDGS----KDLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 272
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 52 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 109
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 110 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 165
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 166 NLAVNED-XELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 223
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 224 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 271
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 52 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 109
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 110 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 165
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 166 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 223
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 224 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 271
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 60 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 117
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 118 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 173
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 174 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 231
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 232 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 279
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 61 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 118
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 119 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 174
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 175 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 280
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 43 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 101 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 156
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 157 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 46 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTR--VYLILEYAPLGTVYRELQKLS 103
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 104 KFDEQRTATYITELANALSYCHSKK--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 160
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E +K+++
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQDTYKRIS 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 133/301 (44%), Gaps = 45/301 (14%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 37 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 95 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 150
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA A + T + APE+ YN+ VDI+S G
Sbjct: 151 NLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 190 ILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP------ASLAKVN--- 226
+ E++T +P ++ P A++ KK++S A + K+N
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 268
Query: 227 -----DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICDPLKLPIQSLKM 278
+P +EK LV S++ +A+ L F Q + EP+ DP +S +
Sbjct: 269 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDL 328
Query: 279 L 279
L
Sbjct: 329 L 329
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMT-GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 46 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 103
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 160
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 161 SRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 64 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 121
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 122 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 177
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 178 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 236 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 283
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 46 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 103
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 160
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 12/237 (5%)
Query: 29 RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
+V L+ G +L E+ + L+ N+++ Y + D +K + ++ E G L
Sbjct: 46 KVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELY 103
Query: 89 QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLG 148
+ +KH D + + ++ L Y H +IHRD+K +N+ + G GE+KI D G
Sbjct: 104 KELQKHGRFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLM-GYKGELKIADFG 160
Query: 149 LAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPA 207
++ R + GT +++ PE+ E + ++E VD++ G+ E + P+ +
Sbjct: 161 WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220
Query: 208 QIFKKVTSGIK-PASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVENQK 262
+ V +K P L+ + K I K L +RL K +++ P+++ +++
Sbjct: 221 THRRIVNVDLKFPPFLSDGS----KDLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 273
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKSQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GL + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-SELKILDFGLCRHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 43 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 101 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 156
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 157 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 46 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 104 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 159
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 160 NLAVNED-XELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 46 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 104 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 159
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 160 NLAVNED-XELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 43 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 101 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 156
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 157 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 49 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 106
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 163
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 164 SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 48 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 106 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 161
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 162 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 46 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 104 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 159
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 160 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 40 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 97
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 98 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 153
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 154 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 211
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 212 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 46 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 103
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 160
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 161 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 47 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 105 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 160
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 161 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 46 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 104 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 159
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 160 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA A + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 12/237 (5%)
Query: 29 RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
+V L+ G +L E+ + L+ N+++ Y + D +K + ++ E G L
Sbjct: 45 KVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELY 102
Query: 89 QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLG 148
+ +KH D + + ++ L Y H +IHRD+K +N+ + G GE+KI D G
Sbjct: 103 KELQKHGRFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLM-GYKGELKIADFG 159
Query: 149 LAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPA 207
++ R + GT +++ PE+ E + ++E VD++ G+ E + P+ +
Sbjct: 160 WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
Query: 208 QIFKKVTSGIK-PASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVENQK 262
+ V +K P L+ + K I K L +RL K +++ P+++ +++
Sbjct: 220 THRRIVNVDLKFPPFLSDGS----KDLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 272
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 39 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 96
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 97 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 152
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 153 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 210
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 211 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 258
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 64 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 121
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 122 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 177
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 178 NLAVNED-CELKILDFGLA-RHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 236 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 283
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 49 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 106
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G ++
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPS 163
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
+ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 164 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 38 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 95
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 96 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 151
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 152 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 209
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 210 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 257
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ LLK LK +NV+ F + + V ++T L +L K D
Sbjct: 72 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSD 130
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ ++ Q+L GL Y+HS IIHRDLK N+ VN + E++I D GLA +
Sbjct: 131 -EHVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNVAVNED-SELRILDFGLARQADEEMT 186
Query: 159 RSVIGTPEFMAPELYEE--EYNELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVT 214
+ T + APE+ YN+ VDI+S G + E++ + +P S+ + + +V
Sbjct: 187 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVV 245
Query: 215 SGIKPASLAKVNDPQIKGFIE 235
P LAK++ + +I+
Sbjct: 246 GTPSPEVLAKISSEHARTYIQ 266
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 47 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 105 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 160
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 161 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 38 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 95
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 96 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 151
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 152 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 209
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 210 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 257
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 37 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 95 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 150
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 151 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 48 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 105
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI + G ++
Sbjct: 106 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIANFGWSVHAPS 162
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 163 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 221
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 75 VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
++ I +L G+L + +H ++ +A +I+ GL H HN +++RDLK NI
Sbjct: 266 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 323
Query: 135 VNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMCILE 192
++ HG V+I DLGLA + + +GT +MAPE+ ++ Y+ D +S G + +
Sbjct: 324 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 382
Query: 193 MVTFEYPYSECKN 205
++ P+ + K
Sbjct: 383 LLRGHSPFRQHKT 395
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 47 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 104
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G +
Sbjct: 105 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSCHAPS 161
Query: 156 PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 75 VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
++ I +L G+L + +H ++ +A +I+ GL H HN +++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 324
Query: 135 VNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMCILE 192
++ HG V+I DLGLA + + +GT +MAPE+ ++ Y+ D +S G + +
Sbjct: 325 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 193 MVTFEYPYSECKN 205
++ P+ + K
Sbjct: 384 LLRGHSPFRQHKT 396
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 75 VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
++ I +L G+L + +H ++ +A +I+ GL H HN +++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 324
Query: 135 VNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMCILE 192
++ HG V+I DLGLA + + +GT +MAPE+ ++ Y+ D +S G + +
Sbjct: 325 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 193 MVTFEYPYSECKN 205
++ P+ + K
Sbjct: 384 LLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 75 VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
++ I +L G+L + +H ++ +A +I+ GL H HN +++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 324
Query: 135 VNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMCILE 192
++ HG V+I DLGLA + + +GT +MAPE+ ++ Y+ D +S G + +
Sbjct: 325 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 193 MVTFEYPYSECKN 205
++ P+ + K
Sbjct: 384 LLRGHSPFRQHKT 396
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDYGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 13/219 (5%)
Query: 44 KLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK 103
++ E+ LK L+ +++K Y V + M+ E + G L Y + K + +
Sbjct: 55 RVEREISYLKLLRHPHIIKLYD--VITTPTDIVMVIE-YAGGELFDYIVEKKRMTEDEGR 111
Query: 104 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVI 162
+ +QI+ + Y H H I+HRDLK +N+ ++ N VKI D GL+ M ++
Sbjct: 112 RFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLN-VKIADFGLSNIMTDGNFLKTSC 168
Query: 163 GTPEFMAPELYEEEY--NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA 220
G+P + APE+ + VD++S G+ + M+ P+ + P +FKKV S +
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-NLFKKVNSCV--Y 225
Query: 221 SLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQV 258
+ P + I + +V +R++ +++ +DP+ V
Sbjct: 226 VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDAGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 14/209 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E ++ L VK Y ++ DD+K + +G L +Y +K + D + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGCLLKYIRKIGSFDETCTRFYTA 139
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIG 163
+I+ L YLH IIHRDLK +NI +N + ++I D G A + +Q A S +G
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVG 196
Query: 164 TPEFMAPELY-EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
T ++++PEL E+ ++ D+++ G I ++V P+ N IF+K+
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDF 253
Query: 223 AKVNDPQIKGFIEKCLV-PASERLSAKDL 250
+ P+ + +EK LV A++RL +++
Sbjct: 254 PEKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 132/301 (43%), Gaps = 45/301 (14%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 60 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 117
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 118 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 173
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 174 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 231
Query: 190 ILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP------ASLAKVN--- 226
+ E++T +P ++ P A++ KK++S A + K+N
Sbjct: 232 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 291
Query: 227 -----DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICDPLKLPIQSLKM 278
+P +EK LV S++ +A+ L F Q + EP+ DP +S +
Sbjct: 292 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDL 351
Query: 279 L 279
L
Sbjct: 352 L 352
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 36 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 95
L+ G +L EV + L+ N+++ Y + D + V +I E G + + +K
Sbjct: 49 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLS 106
Query: 96 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
D + + ++ + L Y HS +IHRD+K +N+ + G+ GE+KI + G ++
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIANFGWSVHAPS 163
Query: 156 PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 214
++ GT +++ PE+ E ++E VD++S G+ E + + P+ E + +K+++
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E ++ L VK Y ++ DD+K + +G L +Y +K + D + +
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTA 142
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIG 163
+I+ L YLH IIHRDLK +NI +N + ++I D G A + +Q A +G
Sbjct: 143 EIVSALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 199
Query: 164 TPEFMAPELYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK---- 218
T ++++PEL E+ + D+++ G I ++V P+ N IF+K+ IK
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYD 255
Query: 219 -PASLAKVNDPQIKGFIEKCLV-PASERLSAKDL 250
PA+ P+ + +EK LV A++RL +++
Sbjct: 256 FPAAFF----PKARDLVEKLLVLDATKRLGCEEM 285
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 132/301 (43%), Gaps = 45/301 (14%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 61 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 118
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 119 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 174
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 175 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 190 ILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP------ASLAKVN--- 226
+ E++T +P ++ P A++ KK++S A + K+N
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 292
Query: 227 -----DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICDPLKLPIQSLKM 278
+P +EK LV S++ +A+ L F Q + EP+ DP +S +
Sbjct: 293 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDL 352
Query: 279 L 279
L
Sbjct: 353 L 353
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 14 YKAFD-EFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDK 71
+KA D + G VA RV++ + +P + + + L++ + NVV+ + +
Sbjct: 28 FKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87
Query: 72 KKTVNMITELF--TSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRD 127
+T +F +L Y K V + IK+ Q+L GL +LHSH ++HRD
Sbjct: 88 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRD 145
Query: 128 LKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYS 185
LK NI V + G++K+ D GLA I Q SV+ T + APE L + Y VD++S
Sbjct: 146 LKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWS 204
Query: 186 FGMCILEM 193
G EM
Sbjct: 205 VGCIFAEM 212
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDRGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E ++ L VK Y ++ DD+K + +G L +Y +K + D + +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIG 163
+I+ L YLH IIHRDLK +NI +N + ++I D G A + +Q A S +G
Sbjct: 141 EIVSALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVG 197
Query: 164 TPEFMAPELYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
T ++++PEL E+ + D+++ G I ++V P+ N IF+K+
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDF 254
Query: 223 AKVNDPQIKGFIEKCLV-PASERLSAKDL 250
+ P+ + +EK LV A++RL +++
Sbjct: 255 PEKFFPKARDLVEKLLVLDATKRLGCEEM 283
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G+L + +K + D + +A +I+ L++LH II+RDLK DN+ ++
Sbjct: 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG--IIYRDLKLDNVLLD 158
Query: 137 GNHGEVKIGDLGLAI--AMQQPTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEM 193
+ G K+ D G+ T + GTP+++APE+ +E Y VD ++ G+ + EM
Sbjct: 159 -HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEM 217
Query: 194 VTFEYPYSECKNPAQIFKKVTSG--IKPASLAKVNDPQIKGFIEK 236
+ P+ E +N +F+ + + + P L + +K F+ K
Sbjct: 218 LCGHAPF-EAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTK 261
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ LLK LK +NV+ F + + V ++T L +L K D
Sbjct: 72 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSD 130
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ ++ Q+L GL Y+HS IIHRDLK N+ VN + E++I D GLA +
Sbjct: 131 -EHVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNVAVNED-SELRILDFGLARQADEEMT 186
Query: 159 RSVIGTPEFMAPELYEE--EYNELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVT 214
+ T + APE+ YN+ VDI+S G + E++ + +P S+ + + +V
Sbjct: 187 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVV 245
Query: 215 SGIKPASLAKVNDPQIKGFIE 235
P LAK++ + +I+
Sbjct: 246 GTPSPEVLAKISSEHARTYIQ 266
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 132/301 (43%), Gaps = 45/301 (14%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP------ASLAKVN--- 226
+ E++T +P ++ P A++ KK++S A + K+N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 272
Query: 227 -----DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICDPLKLPIQSLKM 278
+P +EK LV S++ +A+ L F Q + EP+ DP +S +
Sbjct: 273 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDL 332
Query: 279 L 279
L
Sbjct: 333 L 333
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 132/301 (43%), Gaps = 45/301 (14%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 51 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 108
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 109 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 164
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 165 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 222
Query: 190 ILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP------ASLAKVN--- 226
+ E++T +P ++ P A++ KK++S A + K+N
Sbjct: 223 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 282
Query: 227 -----DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICDPLKLPIQSLKM 278
+P +EK LV S++ +A+ L F Q + EP+ DP +S +
Sbjct: 283 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDL 342
Query: 279 L 279
L
Sbjct: 343 L 343
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 132/301 (43%), Gaps = 45/301 (14%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 47 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 105 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 160
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 161 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 190 ILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP------ASLAKVN--- 226
+ E++T +P ++ P A++ KK++S A + K+N
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 278
Query: 227 -----DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICDPLKLPIQSLKM 278
+P +EK LV S++ +A+ L F Q + EP+ DP +S +
Sbjct: 279 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDL 338
Query: 279 L 279
L
Sbjct: 339 L 339
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 132/301 (43%), Gaps = 45/301 (14%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 61 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 118
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 119 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 174
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 175 NLAVNED-CELKILDFGLA-RHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 190 ILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP------ASLAKVN--- 226
+ E++T +P ++ P A++ KK++S A + K+N
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 292
Query: 227 -----DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICDPLKLPIQSLKM 278
+P +EK LV S++ +A+ L F Q + EP+ DP +S +
Sbjct: 293 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDL 352
Query: 279 L 279
L
Sbjct: 353 L 353
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 14 YKAFD-EFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDK 71
+KA D + G VA RV++ + +P + + + L++ + NVV+ + +
Sbjct: 28 FKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87
Query: 72 KKTVNMITELF--TSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRD 127
+T +F +L Y K V + IK+ Q+L GL +LHSH ++HRD
Sbjct: 88 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRD 145
Query: 128 LKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYS 185
LK NI V + G++K+ D GLA I Q SV+ T + APE L + Y VD++S
Sbjct: 146 LKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWS 204
Query: 186 FGMCILEM 193
G EM
Sbjct: 205 VGCIFAEM 212
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDGGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 14 YKAFD-EFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDK 71
+KA D + G VA RV++ + +P + + + L++ + NVV+ + +
Sbjct: 28 FKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87
Query: 72 KKTVNMITELF--TSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRD 127
+T +F +L Y K V + IK+ Q+L GL +LHSH ++HRD
Sbjct: 88 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRD 145
Query: 128 LKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYS 185
LK NI V + G++K+ D GLA I Q SV+ T + APE L + Y VD++S
Sbjct: 146 LKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWS 204
Query: 186 FGMCILEM 193
G EM
Sbjct: 205 VGCIFAEM 212
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 132/301 (43%), Gaps = 45/301 (14%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 37 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 95 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 150
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 151 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 190 ILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP------ASLAKVN--- 226
+ E++T +P ++ P A++ KK++S A + K+N
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 268
Query: 227 -----DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICDPLKLPIQSLKM 278
+P +EK LV S++ +A+ L F Q + EP+ DP +S +
Sbjct: 269 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDL 328
Query: 279 L 279
L
Sbjct: 329 L 329
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 12/177 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRK-KHKNVDIKVIKNWA 106
E+ LL+ L+ NV++ +++K+ + M+ E G K + +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ----QPTARSVI 162
Q++ GL YLHS I+H+D+K N+ + G +KI LG+A A+ T R+
Sbjct: 116 CQLIDGLEYLHSQG--IVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 163 GTPEFMAPELYE--EEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
G+P F PE+ + ++ VDI+S G+ + + T YP+ E N ++F+ + G
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF-EGDNIYKLFENIGKG 228
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 22/176 (12%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-----DIKVI 102
E+ +LK LK N+VK Y V KK + ++ E +L Q KK +V +
Sbjct: 50 EISILKELKHSNIVKLYD--VIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTA 102
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV- 161
K++ Q+L+G+ Y H ++HRDLK N+ +N GE+KI D GLA A P +
Sbjct: 103 KSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTH 159
Query: 162 -IGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV--TFEYP-YSECKNPAQIFK 211
I T + AP++ ++Y+ +DI+S G EMV T +P SE +IF+
Sbjct: 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 92 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEEE 176
IIHRDLK +NI +N + ++I D G A + +Q A S +GT ++++PEL E+
Sbjct: 150 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 177 YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF+K+ + P+ + +E
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLVE 263
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 264 KLLVLDATKRLGCEEM 279
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ LLK LK +NV+ F + + V ++T L +L K D
Sbjct: 64 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSD 122
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ ++ Q+L GL Y+HS IIHRDLK N+ VN + E++I D GLA +
Sbjct: 123 -EHVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNVAVNED-CELRILDFGLARQADEEMT 178
Query: 159 RSVIGTPEFMAPELYEE--EYNELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVT 214
+ T + APE+ YN+ VDI+S G + E++ + +P S+ + + +V
Sbjct: 179 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVV 237
Query: 215 SGIKPASLAKVNDPQIKGFIE 235
P LAK++ + +I+
Sbjct: 238 GTPSPEVLAKISSEHARTYIQ 258
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 39 PGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN 96
PG + + +E +++K+L+ D +VK + K+ + +ITE G+L + K +
Sbjct: 49 PGSMSVEAFLAEANVMKTLQHDKLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEG 105
Query: 97 VDIKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
+ K +++ QI G+ ++ N IHRDL+ NI V+ + KI D GLA ++
Sbjct: 106 SKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLV-CKIADFGLARVIE 162
Query: 155 --QPTARSVIGTP-EFMAPELYE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
+ TAR P ++ APE + D++SFG+ ++E+VT+ PY NP I
Sbjct: 163 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 34 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK 93
DVL P + EV+ + SL N+++ Y + K M+TEL G+L +K
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRK 113
Query: 94 HK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA 152
H+ + + + +A Q+ G+ YL S IHRDL N+ + VKIGD GL A
Sbjct: 114 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 170
Query: 153 MQQPTARSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ Q V+ + APE L ++ D + FG+ + EM T+ N
Sbjct: 171 LPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
Query: 207 AQIFKKV 213
+QI K+
Sbjct: 231 SQILHKI 237
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 53 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 112
+SL+ N+V+F + + + +I E + G L + + + +Q+L G
Sbjct: 71 RSLRHPNIVRFKEVIL--TPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSG 128
Query: 113 LVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGL---AIAMQQPTARSVIGTPEFM 168
+ Y HS I HRDLK +N ++G+ +KI D G ++ QP +S +GTP ++
Sbjct: 129 VSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYI 184
Query: 169 APE-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
APE L +EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI 231
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 39 PGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN 96
PG + + +E +++K+L+ D +VK + K+ + +ITE G+L + K +
Sbjct: 222 PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEG 278
Query: 97 VDIKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
+ K +++ QI G+ ++ N IHRDL+ NI V+ + KI D GLA ++
Sbjct: 279 SKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARVIE 335
Query: 155 --QPTARSVIGTP-EFMAPELYE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
+ TAR P ++ APE + D++SFG+ ++E+VT+ PY NP I
Sbjct: 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELY-EE 175
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E+
Sbjct: 153 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 176 EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF K+ + P+ + +E
Sbjct: 210 SAXKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKIIK--LEYDFPEKFFPKARDLVE 266
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 267 KLLVLDATKRLGCEEM 282
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 132/301 (43%), Gaps = 45/301 (14%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 37 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 95 FNDVYLVTHLM-GADLNNIVKCAKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 150
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D GLA + T + APE+ YN+ VDI+S G
Sbjct: 151 NLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 190 ILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP------ASLAKVN--- 226
+ E++T +P ++ P A++ KK++S A + K+N
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 268
Query: 227 -----DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICDPLKLPIQSLKM 278
+P +EK LV S++ +A+ L F Q + EP+ DP +S +
Sbjct: 269 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDL 328
Query: 279 L 279
L
Sbjct: 329 L 329
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEEE 176
IIHRDLK +NI +N + ++I D G A + +Q A + +GT ++++PEL E+
Sbjct: 151 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 177 YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF+K+ + P+ + +E
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLVE 264
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 265 KLLVLDATKRLGCEEM 280
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 22/176 (12%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-----DIKVI 102
E+ +LK LK N+VK Y V KK + ++ E +L Q KK +V +
Sbjct: 50 EISILKELKHSNIVKLYD--VIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTA 102
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV- 161
K++ Q+L+G+ Y H ++HRDLK N+ +N GE+KI D GLA A P +
Sbjct: 103 KSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTH 159
Query: 162 -IGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV--TFEYP-YSECKNPAQIFK 211
+ T + AP++ ++Y+ +DI+S G EMV T +P SE +IF+
Sbjct: 160 EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 34 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK 93
DVL P + EV+ + SL N+++ Y + K M+TEL G+L +K
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRK 103
Query: 94 HK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA 152
H+ + + + +A Q+ G+ YL S IHRDL N+ + VKIGD GL A
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 160
Query: 153 MQQPTARSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ Q V+ + APE L ++ D + FG+ + EM T+ N
Sbjct: 161 LPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 207 AQIFKKV 213
+QI K+
Sbjct: 221 SQILHKI 227
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 39 PGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN 96
PG + Q E +L+K+L+ D +V+ Y V K++ + +ITE G+L + K +
Sbjct: 46 PGTMSVQAFLEEANLMKTLQHDKLVRLYA--VVTKEEPIYIITEFMAKGSLLDFLKSDEG 103
Query: 97 VDIKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
+ + K +++ QI G+ Y+ N IHRDL+ N+ V+ + KI D GLA ++
Sbjct: 104 GKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESL-MCKIADFGLARVIE 160
Query: 155 --QPTARSVIGTP-EFMAPELYEEE-YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
+ TAR P ++ APE + +++SFG+ + E+VT+ + PY N A +
Sbjct: 161 DNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN-ADV 219
Query: 210 FKKVTSGIKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLK 252
++ G + + D ++ ++ C +E D L+
Sbjct: 220 MSALSQGYRMPRMENCPD-ELYDIMKMCWKEKAEERPTFDYLQ 261
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 34 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK 93
DVL P + EV+ + SL N+++ Y + K M+TEL G+L +K
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRK 113
Query: 94 HK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA 152
H+ + + + +A Q+ G+ YL S IHRDL N+ + VKIGD GL A
Sbjct: 114 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 170
Query: 153 MQQPTARSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ Q V+ + APE L ++ D + FG+ + EM T+ N
Sbjct: 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
Query: 207 AQIFKKV 213
+QI K+
Sbjct: 231 SQILHKI 237
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 15/189 (7%)
Query: 39 PGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN 96
PG + Q E +L+K+L+ D +V+ Y V +++ + +ITE G+L + K +
Sbjct: 47 PGTMSVQAFLEEANLMKTLQHDKLVRLYA--VVTREEPIYIITEYMAKGSLLDFLKSDEG 104
Query: 97 VDIKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
+ + K +++ QI G+ Y+ N IHRDL+ N+ V+ + KI D GLA ++
Sbjct: 105 GKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESL-MCKIADFGLARVIE 161
Query: 155 --QPTARSVIGTP-EFMAPELYEEE-YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
+ TAR P ++ APE + D++SFG+ + E+VT+ + PY N A +
Sbjct: 162 DNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTN-ADV 220
Query: 210 FKKVTSGIK 218
++ G +
Sbjct: 221 MTALSQGYR 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 34 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK 93
DVL P + EV+ + SL N+++ Y + K M+TEL G+L +K
Sbjct: 51 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRK 107
Query: 94 HK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA 152
H+ + + + +A Q+ G+ YL S IHRDL N+ + VKIGD GL A
Sbjct: 108 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 164
Query: 153 MQQPTARSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ Q V+ + APE L ++ D + FG+ + EM T+ N
Sbjct: 165 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 207 AQIFKKV 213
+QI K+
Sbjct: 225 SQILHKI 231
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI GLA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILGFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEEE 176
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E+
Sbjct: 153 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 177 YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF K+ + P+ + +E
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKIIK--LEYDFPEKFFPKARDLVE 266
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 267 KLLVLDATKRLGCEEM 282
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E ++ L VK Y ++ DD+K + +G L +Y +K + D + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIG 163
+I+ L YLH IIHRDLK +NI +N + ++I D G A + +Q A +G
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 196
Query: 164 TPEFMAPELYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
T ++++PEL E+ + D+++ G I ++V P+ N IF+K+
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDF 253
Query: 223 AKVNDPQIKGFIEKCLV-PASERLSAKDL 250
+ P+ + +EK LV A++RL +++
Sbjct: 254 PEKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEEE 176
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E+
Sbjct: 151 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 177 YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF+K+ + P+ + +E
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLVE 264
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 265 KLLVLDATKRLGCEEM 280
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEEE 176
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E+
Sbjct: 151 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 177 YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF+K+ + P+ + +E
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLVE 264
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 265 KLLVLDATKRLGCEEM 280
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 34 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--- 90
D Q+P ++++ +E+ +LKSL N++K ++ + D + ++ E G L +
Sbjct: 58 DRSQVP--MEQIEAEIEVLKSLDHPNIIKIFEVFED--YHNMYIVMETCEGGELLERIVS 113
Query: 91 -RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN--HGEVKIGDL 147
+ + K + + +Q+++ L Y HS + ++H+DLK +NI H +KI D
Sbjct: 114 AQARGKALSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDF 171
Query: 148 GLA-IAMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYS 201
GLA + + + GT +MAPE+++ + DI+S G+ + ++T P++
Sbjct: 172 GLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFT 226
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEEE 176
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E+
Sbjct: 153 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 177 YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF+K+ + P+ + +E
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLVE 266
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 267 KLLVLDATKRLGCEEM 282
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 81/156 (51%), Gaps = 19/156 (12%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-----DIKVI 102
E+ +LK LK N+VK Y V KK + ++ E +L Q KK +V +
Sbjct: 50 EISILKELKHSNIVKLYD--VIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTA 102
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV- 161
K++ Q+L+G+ Y H ++HRDLK N+ +N GE+KI D GLA A P +
Sbjct: 103 KSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTH 159
Query: 162 -IGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
+ T + AP++ ++Y+ +DI+S G EMV
Sbjct: 160 EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 63 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 120
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 121 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 178
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
TPEF+APE+ E L D++S G+ +++ P+ K +L
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF-------------LGDTKQETL 225
Query: 223 AKVN--------------DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICD 267
A V+ K FI + LV +R++ +D L+ P+++ ++ ++ +
Sbjct: 226 ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSS 285
Query: 268 PLKLP 272
P
Sbjct: 286 AWSHP 290
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 5 GLYMTPFSSYKAFDEFAGIEVAWSRVKIDDV------LQLPGD---LQKLYSEVHLLKSL 55
G Y+T F + V ++ K+DD ++LP +K+ EV L L
Sbjct: 1 GRYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 60
Query: 56 KDDNVVKFYKSWVDDK----------KKTVNMITELFTSGNLRQYRKKHKNVDIK---VI 102
+ +V+++ +W++ K + + +L NL+ + ++ + V
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ------- 155
+ QI + +LHS ++HRDLK NIF + VK+GD GL AM Q
Sbjct: 121 LHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTV 177
Query: 156 -----PTARSV--IGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYS 201
AR +GT +M+PE ++ Y+ VDI+S G+ + E++ YP+S
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFS 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEEE 176
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E+
Sbjct: 151 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 177 YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF+K+ + P+ + +E
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLVE 264
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 265 KLLVLDATKRLGCEEM 280
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E ++ L VK Y ++ DD+K + +G L +Y +K + D + +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIG 163
+I+ L YLH IIHRDLK +NI +N + ++I D G A + +Q A +G
Sbjct: 141 EIVSALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 197
Query: 164 TPEFMAPELYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
T ++++PEL E+ + D+++ G I ++V P+ N IF+K+
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDF 254
Query: 223 AKVNDPQIKGFIEKCLV-PASERLSAKDL 250
+ P+ + +EK LV A++RL +++
Sbjct: 255 PEKFFPKARDLVEKLLVLDATKRLGCEEM 283
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEEE 176
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E+
Sbjct: 153 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 177 YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF+K+ + P+ + +E
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLVE 266
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 267 KLLVLDATKRLGCEEM 282
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 34 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK 93
DVL P + EV+ + SL N+++ Y + K M+TEL G+L +K
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRK 103
Query: 94 HK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA 152
H+ + + + +A Q+ G+ YL S IHRDL N+ + VKIGD GL A
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 160
Query: 153 MQQPTARSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ Q V+ + APE L ++ D + FG+ + EM T+ N
Sbjct: 161 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 207 AQIFKKV 213
+QI K+
Sbjct: 221 SQILHKI 227
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 63 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 120
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 121 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 178
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
TPEF+APE+ E L D++S G+ +++ P+ K +L
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF-------------LGDTKQETL 225
Query: 223 AKVN--------------DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICD 267
A V+ K FI + LV +R++ +D L+ P+++ ++ ++ +
Sbjct: 226 ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSS 285
Query: 268 PLKLP 272
P
Sbjct: 286 AWSHP 290
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
TPEF+APE+ E L D++S G+ +++ P+ K +L
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF-------------LGDTKQETL 226
Query: 223 AKVN--------------DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICD 267
A V+ K FI + LV +R++ +D L+ P+++ ++ ++ +
Sbjct: 227 ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSS 286
Query: 268 PLKLP 272
P
Sbjct: 287 AWSHP 291
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
TPEF+APE+ E L D++S G+ +++ P+ K +L
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF-------------LGDTKQETL 226
Query: 223 AKVN--------------DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICD 267
A V+ K FI + LV +R++ +D L+ P+++ ++ ++ +
Sbjct: 227 ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSS 286
Query: 268 PLKLP 272
P
Sbjct: 287 AWSHP 291
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 34 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK 93
DVL P + EV+ + SL N+++ Y + K M+TEL G+L +K
Sbjct: 51 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRK 107
Query: 94 HK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA 152
H+ + + + +A Q+ G+ YL S IHRDL N+ + VKIGD GL A
Sbjct: 108 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 164
Query: 153 MQQPTARSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ Q V+ + APE L ++ D + FG+ + EM T+ N
Sbjct: 165 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 207 AQIFKKV 213
+QI K+
Sbjct: 225 SQILHKI 231
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 9/158 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
TPEF+APE+ E L D++S G+ +++ P+
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 74 TVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
T+ ++T+L G L +Y +HK N+ +++ NW QI G++YL ++HRDL N
Sbjct: 90 TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARN 147
Query: 133 IFVNG-NHGEVKIGDLGLAIAMQ----QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSF 186
+ V NH VKI D GLA ++ + A ++MA E ++ ++ D++S+
Sbjct: 148 VLVKSPNH--VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSY 205
Query: 187 GMCILEMVTF 196
G+ I E++TF
Sbjct: 206 GVTIWELMTF 215
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 9/158 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
TPEF+APE+ E L D++S G+ +++ P+
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 14/187 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA D I VA R+++D + G E+ LLK L N+V V ++
Sbjct: 38 YKAKDSQGRI-VALKRIRLDA--EDEGIPSTAIREISLLKELHHPNIVSLID--VIHSER 92
Query: 74 TVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
+ ++ E F +L++ ++K + IK + Q+L G+ + H H I+HRDLK N
Sbjct: 93 CLTLVFE-FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQN 149
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARSV--IGTPEFMAPELY--EEEYNELVDIYSFGM 188
+ +N + G +K+ D GLA A P + T + AP++ ++Y+ VDI+S G
Sbjct: 150 LLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGC 208
Query: 189 CILEMVT 195
EM+T
Sbjct: 209 IFAEMIT 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 9/158 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
TPEF+APE+ E L D++S G+ +++ P+
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 34 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK 93
DVL P + EV+ + SL N+++ Y + K M+TEL G+L +K
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRK 103
Query: 94 HK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA 152
H+ + + + +A Q+ G+ YL S IHRDL N+ + VKIGD GL A
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 160
Query: 153 MQQPTARSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNP 206
+ Q V+ + APE L ++ D + FG+ + EM T+ N
Sbjct: 161 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 207 AQIFKKV 213
+QI K+
Sbjct: 221 SQILHKI 227
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 9/158 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
TPEF+APE+ E L D++S G+ +++ P+
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 74 TVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
T+ ++T+L G L +Y +HK N+ +++ NW QI G++YL ++HRDL N
Sbjct: 113 TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARN 170
Query: 133 IFVNG-NHGEVKIGDLGLAIAMQ----QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSF 186
+ V NH VKI D GLA ++ + A ++MA E ++ ++ D++S+
Sbjct: 171 VLVKSPNH--VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSY 228
Query: 187 GMCILEMVTF 196
G+ I E++TF
Sbjct: 229 GVTIWELMTF 238
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 9/158 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
TPEF+APE+ E L D++S G+ +++ P+
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 9/158 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
TPEF+APE+ E L D++S G+ +++ P+
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 9/158 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
TPEF+APE+ E L D++S G+ +++ P+
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 9/158 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
TPEF+APE+ E L D++S G+ +++ P+
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 11/153 (7%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-DIKVIKNWA 106
EV LLK LK N+V + + +K++ ++ E + +L+QY N+ ++ +K +
Sbjct: 50 EVSLLKDLKHANIVTLHD--IIHTEKSLTLVFE-YLDKDLKQYLDDCGNIINMHNVKLFL 106
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGT 164
Q+L GL Y H ++HRDLK N+ +N GE+K+ D GLA A PT + + T
Sbjct: 107 FQLLRGLAYCHRQK--VLHRDLKPQNLLIN-ERGELKLADFGLARAKSIPTKTYDNEVVT 163
Query: 165 PEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ P+ L +Y+ +D++ G EM T
Sbjct: 164 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT 196
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITEL-----FTSGNLRQYRKKHKNV 97
++ Y E+ LLK ++ +NV+ + D+ T++ T+ F +L + KH+ +
Sbjct: 69 KRAYRELRLLKHMRHENVIGLLDVFTPDE--TLDDFTDFYLVMPFMGTDLGKL-MKHEKL 125
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 157
I+ Q+L GL Y+H+ IIHRDLK N+ VN + E+KI D GLA
Sbjct: 126 GEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNED-CELKILDFGLARQADSEM 182
Query: 158 ARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
V+ T + APE L Y + VDI+S G + EM+T
Sbjct: 183 XGXVV-TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT 221
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 9/158 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
TPEF+APE+ E L D++S G+ +++ P+
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 14/187 (7%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKK 73
YKA D I VA R+++D + G E+ LLK L N+V V ++
Sbjct: 38 YKAKDSQGRI-VALKRIRLDA--EDEGIPSTAIREISLLKELHHPNIVSLID--VIHSER 92
Query: 74 TVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
+ ++ E F +L++ ++K + IK + Q+L G+ + H H I+HRDLK N
Sbjct: 93 CLTLVFE-FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQN 149
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARSV--IGTPEFMAPELY--EEEYNELVDIYSFGM 188
+ +N + G +K+ D GLA A P + T + AP++ ++Y+ VDI+S G
Sbjct: 150 LLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGC 208
Query: 189 CILEMVT 195
EM+T
Sbjct: 209 IFAEMIT 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 29/171 (16%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKT-----VNMITELFTSGNLRQYRKKHKNVDIKV 101
+E++ ++ +N++ F + D K T + +IT+ +G+L Y K +D K
Sbjct: 80 TEIYQTVLMRHENILGFIAA---DIKGTGSWTQLYLITDYHENGSLYDYLKS-TTLDAKS 135
Query: 102 IKNWARQILHGLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 155
+ A + GL +LH+ P I HRDLK NI V N G I DLGLA+
Sbjct: 136 MLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVKFIS 194
Query: 156 PT------ARSVIGTPEFMAPELYEEEYNE-------LVDIYSFGMCILEM 193
T + +GT +M PE+ +E N + D+YSFG+ + E+
Sbjct: 195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E ++ L VK Y + DD+K + +G L +Y +K + D + +
Sbjct: 87 ERDVMSRLDHPFFVKLYFCFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTA 144
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIG 163
+I+ L YLH IIHRDLK +NI +N + ++I D G A + +Q A +G
Sbjct: 145 EIVSALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 201
Query: 164 TPEFMAPELY-EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
T ++++PEL E+ + D+++ G I ++V P+ N IF+K+
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDF 258
Query: 223 AKVNDPQIKGFIEKCLV-PASERLSAKDL 250
+ P+ + +EK LV A++RL +++
Sbjct: 259 PEKFFPKARDLVEKLLVLDATKRLGCEEM 287
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 92 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEEE 176
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E+
Sbjct: 150 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 177 YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF+K+ + P+ + +E
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLVE 263
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 264 KLLVLDATKRLGCEEM 279
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+++ EV +L+ + NV+ + + + + V +I EL + G L + + +++ +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA- 158
++ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA ++
Sbjct: 118 TSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 159 RSVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVT 214
+++ GTPEF+APE+ E L D++S G+ +++ P+ ++ + A I V+
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVS 234
Query: 215 SGIKPASLAKVNDPQIKGFIEKCLVPAS-ERLSAKDLLKDPFLQ-VENQK 262
+ ++ K FI K LV + +RL+ ++ L+ P++ V+NQ+
Sbjct: 235 YDFDEEFFSHTSELA-KDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 71 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEEE 176
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E+
Sbjct: 129 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 177 YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF+K+ + P+ + +E
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLVE 242
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 243 KLLVLDATKRLGCEEM 258
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 70 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEEE 176
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E+
Sbjct: 128 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 177 YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF+K+ + P+ + +E
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLVE 241
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 242 KLLVLDATKRLGCEEM 257
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 14/196 (7%)
Query: 61 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 120
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 77 VKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 121 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELY-EE 175
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E+
Sbjct: 135 --IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 176 EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ D+++ G I ++V P+ N IF+K+ + P+ + +E
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLVE 248
Query: 236 KCLV-PASERLSAKDL 250
K LV A++RL +++
Sbjct: 249 KLLVLDATKRLGCEEM 264
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E ++ L VK Y ++ DD+K + +G L +Y +K + D + +
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTA 117
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIG 163
+I+ L YLH IIHRDLK +NI +N + ++I D G A + +Q A +G
Sbjct: 118 EIVSALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 174
Query: 164 TPEFMAPELYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
T ++++PEL E+ + D+++ G I ++V P+ N IF+K+
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDF 231
Query: 223 AKVNDPQIKGFIEKCLV-PASERLSAKDL 250
+ P+ + +EK LV A++RL +++
Sbjct: 232 PEKFFPKARDLVEKLLVLDATKRLGCEEM 260
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 23/177 (12%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK---------NVD 98
E+ LL+ LK NV+ K ++ + V ++ + + +L K H+ +
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFD-YAEHDLWHIIKFHRASKANKKPVQLP 126
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNG---NHGEVKIGDLGLAIAMQQ 155
++K+ QIL G+ YLH++ ++HRDLK NI V G G VKI D+G A
Sbjct: 127 RGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 156 PTA-----RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVTFEYPYSECKN 205
P V+ T + APEL Y + +DI++ G E++T E P C+
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQ 240
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 41/249 (16%)
Query: 39 PGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN 96
PG + + E ++K LK D +V+ Y ++ + ++TE G+L + K +
Sbjct: 43 PGTMSPESFLEEAQIMKKLKHDKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKDGEG 99
Query: 97 VDIKV--IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IA 152
+K+ + + A Q+ G+ Y+ N IHRDL+ NI V GN KI D GLA I
Sbjct: 100 RALKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSANILV-GNGLICKIADFGLARLIE 156
Query: 153 MQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQ 208
+ TAR P ++ APE LY + D++SFG+ + E+VT PY N +
Sbjct: 157 DNEXTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMNN-RE 214
Query: 209 IFKKVTSGIK-------PASLAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPF 255
+ ++V G + P SL ++ DP+ + P E L + L+D F
Sbjct: 215 VLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEER--------PTFEYLQS--FLEDYF 264
Query: 256 LQVENQKEP 264
E Q +P
Sbjct: 265 TATEPQYQP 273
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E ++ L VK Y ++ DD+K + +G L +Y +K + D + +
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTA 116
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIG 163
+I+ L YLH IIHRDLK +NI +N + ++I D G A + +Q A +G
Sbjct: 117 EIVSALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVG 173
Query: 164 TPEFMAPELYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
T ++++PEL E+ + D+++ G I ++V P+ N IF+K+
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDF 230
Query: 223 AKVNDPQIKGFIEKCLV-PASERLSAKDL 250
+ P+ + +EK LV A++RL +++
Sbjct: 231 PEKFFPKARDLVEKLLVLDATKRLGCEEM 259
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 121/230 (52%), Gaps = 16/230 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+++ EV +L+ + NV+ + + + + V +I EL + G L + + +++ +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA- 158
++ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA ++
Sbjct: 118 TSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 159 RSVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVT 214
+++ GTPEF+APE+ E L D++S G+ +++ P+ ++ + A I V+
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVS 234
Query: 215 SGIKPASLAKVNDPQIKGFIEKCLVPAS-ERLSAKDLLKDPFLQ-VENQK 262
++ ++ K FI K LV + +RL+ ++ L+ P++ V+NQ+
Sbjct: 235 YDFDEEFFSQTSELA-KDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V
Sbjct: 50 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 107
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 108 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTX 164
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK 211
+ G ++ APE L +++ D+++FG+ + E+ T+ +P+Q+++
Sbjct: 165 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVN----MITELFTSGNLRQYRKKH 94
P + ++ E+ ++K L NVV + +K N + E G+LR+Y +
Sbjct: 54 PKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF 113
Query: 95 KN---VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV--KIGDLGL 149
+N + I+ I L YLH + IIHRDLK +NI + + KI DLG
Sbjct: 114 ENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGY 171
Query: 150 AIAMQQ-PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPA 207
A + Q +GT +++APEL E++ Y VD +SFG E +T P+ P
Sbjct: 172 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV 231
Query: 208 QIFKKV 213
Q KV
Sbjct: 232 QWHGKV 237
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVN----MITELFTSGNLRQYRKKH 94
P + ++ E+ ++K L NVV + +K N + E G+LR+Y +
Sbjct: 53 PKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF 112
Query: 95 KN---VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV--KIGDLGL 149
+N + I+ I L YLH + IIHRDLK +NI + + KI DLG
Sbjct: 113 ENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGY 170
Query: 150 AIAMQQ-PTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPA 207
A + Q +GT +++APEL E++ Y VD +SFG E +T P+ P
Sbjct: 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV 230
Query: 208 QIFKKV 213
Q KV
Sbjct: 231 QWHGKV 236
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 7/128 (5%)
Query: 71 KKKTVNMITELFTSGNLRQY--RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
K K + + E G L Q+ +++ + +D + QI G+ Y+HS +IHRDL
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLIHRDL 162
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-VIGTPEFMAPE-LYEEEYNELVDIYSF 186
K NIF+ + +VKIGD GL +++ R+ GT +M+PE + ++Y + VD+Y+
Sbjct: 163 KPSNIFLV-DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYAL 221
Query: 187 GMCILEMV 194
G+ + E++
Sbjct: 222 GLILAELL 229
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 121/230 (52%), Gaps = 16/230 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+++ EV +L+ + NV+ + + + + V +I EL + G L + + +++ +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA- 158
++ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA ++
Sbjct: 118 TSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 159 RSVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVT 214
+++ GTPEF+APE+ E L D++S G+ +++ P+ ++ + A I V+
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVS 234
Query: 215 SGIKPASLAKVNDPQIKGFIEKCLVPAS-ERLSAKDLLKDPFLQ-VENQK 262
++ ++ K FI K LV + +RL+ ++ L+ P++ V+NQ+
Sbjct: 235 YDFDEEFFSQTSELA-KDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 12/203 (5%)
Query: 51 LLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQIL 110
LLK++K +V + S+ K + + + G L + ++ + + +A +I
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADK--LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIA 149
Query: 111 HGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAI--AMQQPTARSVIGTPEFM 168
L YLHS N I++RDLK +NI ++ + G + + D GL T + GTPE++
Sbjct: 150 SALGYLHSLN--IVYRDLKPENILLD-SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYL 206
Query: 169 APE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVND 227
APE L+++ Y+ VD + G + EM+ + P +N A+++ + + KP L
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEML-YGLPPFYSRNTAEMYDNILN--KPLQLKPNIT 263
Query: 228 PQIKGFIEKCLVP-ASERLSAKD 249
+ +E L ++RL AKD
Sbjct: 264 NSARHLLEGLLQKDRTKRLGAKD 286
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 97 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
+ I+VIK + +L+ Y+H+ I HRD+K NI ++ N G VK+ D G + M
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNE-KNICHRDVKPSNILMDKN-GRVKLSDFGESEYMVDK 205
Query: 157 TARSVIGTPEFMAPELYEEE--YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
+ GT EFM PE + E YN VDI+S G+C+ M P+S + ++F +
Sbjct: 206 KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
Query: 214 TS 215
+
Sbjct: 266 RT 267
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 9/137 (6%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAI--AMQQPTARSVI 162
+A +I GL +LH II+RDLK DN+ ++ + G +KI D G+ M T R
Sbjct: 125 YAAEISIGLFFLHKRG--IIYRDLKLDNVMLD-SEGHIKIADFGMCKEHMMDGVTTREFC 181
Query: 163 GTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--IKP 219
GTP+++APE+ + Y + VD +++G+ + EM+ + P+ + ++ ++F+ + P
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF-DGEDEDELFQSIMEHNVSYP 240
Query: 220 ASLAKVNDPQIKGFIEK 236
SL+K KG + K
Sbjct: 241 KSLSKEAVSICKGLMTK 257
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+++ EV +L+ + NV+ + + + + V +I EL + G L + + +++ +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA- 158
++ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA ++
Sbjct: 118 TSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 159 RSVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVT 214
+++ GTPEF+APE+ E L D++S G+ +++ P+ ++ + A I V+
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVS 234
Query: 215 SGIKPASLAKVNDPQIKGFIEKCLVPAS-ERLSAKDLLKDPFLQ-VENQK 262
+ ++ K FI K LV + +RL+ ++ L+ P++ V+NQ+
Sbjct: 235 YDFDEEFFSHTSELA-KDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V
Sbjct: 50 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 107
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 108 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTF 164
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK 211
+ G ++ APE L +++ D+++FG+ + E+ T+ +P+Q+++
Sbjct: 165 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+++ EV +L+ + NV+ + + + + V +I EL + G L + + +++ +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA- 158
++ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA ++
Sbjct: 118 TSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 159 RSVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVT 214
+++ GTPEF+APE+ E L D++S G+ +++ P+ ++ + A I V+
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVS 234
Query: 215 SGIKPASLAKVNDPQIKGFIEKCLVPAS-ERLSAKDLLKDPFLQ-VENQK 262
+ ++ K FI K LV + +RL+ ++ L+ P++ V+NQ+
Sbjct: 235 YDFDEEFFSHTSELA-KDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 108/222 (48%), Gaps = 18/222 (8%)
Query: 48 EVHLLKSLKDD-NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 106
E H+L+ + +++ S+ + + ++ +L G L Y + + K ++
Sbjct: 149 ETHILRQVAGHPHIITLIDSY--ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIM 206
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-PTARSVIGTP 165
R +L + +LH++N I+HRDLK +NI ++ N ++++ D G + ++ R + GTP
Sbjct: 207 RSLLEAVSFLHANN--IVHRDLKPENILLDDNM-QIRLSDFGFSCHLEPGEKLRELCGTP 263
Query: 166 EFMAPELYE-------EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK 218
++APE+ + Y + VD+++ G+ + ++ P+ + + + + G
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH-RRQILMLRMIMEGQY 322
Query: 219 PASLAKVND--PQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 257
S + +D +K I + L V RL+A+ L+ PF +
Sbjct: 323 QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 114
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 115 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTX 171
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 65 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 122 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGA 178
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 179 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 228
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 57 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA ++ + TAR
Sbjct: 114 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDAEXTAREGA 170
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 66 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 123 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGA 179
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 180 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 63 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 120 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGA 176
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 177 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 53 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 110
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 111 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 167
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 168 TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 209
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 21/234 (8%)
Query: 68 VDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRD 127
V D K V ++TEL G L + K + I + YLHS ++HRD
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG--VVHRD 146
Query: 128 LKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPELYEEE-YNE 179
LK NI +GN ++I D G A ++ ++ TP F+APE+ + + Y+E
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTANFVAPEVLKRQGYDE 204
Query: 180 LVDIYSFGMCILEMVTFEYPYSE--CKNPAQIFKKVTSGIKPASLAKVN--DPQIKGFIE 235
DI+S G+ + M+ P++ P +I ++ SG S N K +
Sbjct: 205 GCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVS 264
Query: 236 KCL-VPASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKMLRLPMSGPSS 288
K L V +RL+AK +L+ P++ QK+ + +L Q L++++ M+ S
Sbjct: 265 KMLHVDPHQRLTAKQVLQHPWV---TQKDKLPQS-QLSHQDLQLVKGAMAATYS 314
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 114
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 115 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 171
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 57 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 114 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGA 170
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 8/183 (4%)
Query: 35 VLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH 94
VL+ D + + +E+ +L L N++K + + + ++++ EL T G L +
Sbjct: 85 VLKKTVDKKIVRTEIGVLLRLSHPNIIKLKE--IFETPTEISLVLELVTGGELFDRIVEK 142
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF--VNGNHGEVKIGDLGLA-I 151
+ + +QIL + YLH + I+HRDLK +N+ +KI D GL+ I
Sbjct: 143 GYYSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200
Query: 152 AMQQPTARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIF 210
Q ++V GTP + APE+ Y VD++S G+ ++ P+ + + +F
Sbjct: 201 VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF 260
Query: 211 KKV 213
+++
Sbjct: 261 RRI 263
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 56 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 113
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 114 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 170
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 171 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 212
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 59 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 116 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGA 172
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 173 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 58 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 114
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 115 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGA 171
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 172 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 221
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 54 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 111
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 112 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 168
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 169 TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV--- 97
D+ + E+ ++KSL N+++ Y+++ D+ + ++ EL T G L + R HK V
Sbjct: 49 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTD--IYLVMELCTGGELFE-RVVHKRVFRE 105
Query: 98 --DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN--IFVNGNHGEVKIGDLGLAIAM 153
+++K+ +L + Y H N + HRDLK +N + +K+ D GLA
Sbjct: 106 SDAARIMKD----VLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159
Query: 154 QQ-PTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYS 201
+ R+ +GTP +++P++ E Y D +S G+ + ++ P+S
Sbjct: 160 KPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFS 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 114
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 115 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 171
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 57 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 114 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGA 170
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD G VA K+ Q ++ Y E+ LLK +K +NV+ + +
Sbjct: 41 AFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
V ++T L +L K K D V + QIL GL Y+HS + IIHRDLK
Sbjct: 99 FNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMC 189
N+ VN + E+KI D LA + T + APE+ YN+ VDI+S G
Sbjct: 155 NLAVNED-CELKILDFYLARHTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 190 ILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 235
+ E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 9/158 (5%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
EV +LK ++ NV+ ++ + + K V +I EL G L + + +++ + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIG 163
QIL+G+ YLHS I H DLK +NI + N +KI D GLA + +++ G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 164 TPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
TP F+APE+ E L D++S G+ +++ P+
Sbjct: 180 TPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+++ EV++L+ ++ N++ + + + K V +I EL + G L + + +++
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTEDEA 117
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA- 158
+ +QIL G+ YLHS I H DLK +NI + N + +K+ D G+A ++
Sbjct: 118 TQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 175
Query: 159 RSVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
+++ GTPEF+APE+ E L D++S G+ +++ P+
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV--- 97
D+ + E+ ++KSL N+++ Y+++ D+ + ++ EL T G L + R HK V
Sbjct: 66 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTD--IYLVMELCTGGELFE-RVVHKRVFRE 122
Query: 98 --DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN--IFVNGNHGEVKIGDLGLAIAM 153
+++K+ +L + Y H N + HRDLK +N + +K+ D GLA
Sbjct: 123 SDAARIMKD----VLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176
Query: 154 QQ-PTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYS 201
+ R+ +GTP +++P++ E Y D +S G+ + ++ P+S
Sbjct: 177 KPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFS 225
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 54 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 111
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 112 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 168
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 169 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+++ EV++L+ ++ N++ + + + K V +I EL + G L + + +++
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTEDEA 110
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA- 158
+ +QIL G+ YLHS I H DLK +NI + N + +K+ D G+A ++
Sbjct: 111 TQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 168
Query: 159 RSVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
+++ GTPEF+APE+ E L D++S G+ +++ P+
Sbjct: 169 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 114
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 115 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 171
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 122
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 123 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 179
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 180 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+++ EV++L+ ++ N++ + + + K V +I EL + G L + + +++
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTEDEA 131
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA- 158
+ +QIL G+ YLHS I H DLK +NI + N + +K+ D G+A ++
Sbjct: 132 TQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 189
Query: 159 RSVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 200
+++ GTPEF+APE+ E L D++S G+ +++ P+
Sbjct: 190 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 109
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 110 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 166
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 54 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 111
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 112 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 168
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 169 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +I E T GNL Y ++ + V
Sbjct: 50 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVS 107
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 108 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTX 164
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK 211
+ G ++ APE L +++ D+++FG+ + E+ T+ +P+Q+++
Sbjct: 165 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 16/169 (9%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-PTARSVIG 163
+A +I GL LH I++RDLK +NI ++ +HG ++I DLGLA+ + + T + +G
Sbjct: 291 YAAEICCGLEDLHRER--IVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVG 347
Query: 164 TPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PA 220
T +MAPE+ + E Y D ++ G + EM+ + P+ + K + ++V +K P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKEVPE 406
Query: 221 SLAKVNDPQIKGFIEK--CLVPASERL-----SAKDLLKDPFLQVENQK 262
++ PQ + + C PA ERL SA+++ + P + N K
Sbjct: 407 EYSERFSPQARSLCSQLLCKDPA-ERLGCRGGSAREVKEHPLFKKLNFK 454
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 9/138 (6%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G+L + ++ + + + + ++ +I L YLH II+RDLK DN+ ++
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLD 187
Query: 137 GNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEM 193
+ G +K+ D G+ +P T + GTP ++APE+ E+Y VD ++ G+ + EM
Sbjct: 188 -SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 246
Query: 194 VTFEYPY---SECKNPAQ 208
+ P+ NP Q
Sbjct: 247 MAGRSPFDIVGSSDNPDQ 264
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 109
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 110 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 166
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVI 162
+A +I GL +L S II+RDLK DN+ ++ + G +KI D G+ T +
Sbjct: 447 YAAEIAIGLFFLQSKG--IIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFC 503
Query: 163 GTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--IKP 219
GTP+++APE+ + Y + VD ++FG+ + EM+ + P+ E ++ ++F+ + P
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDEDELFQSIMEHNVAYP 562
Query: 220 ASLAKVNDPQIKGFIEK 236
S++K KG + K
Sbjct: 563 KSMSKEAVAICKGLMTK 579
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 63 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 120 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGA 176
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 177 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 109
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 110 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 166
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 67 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 124 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGA 180
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 181 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 230
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 17/257 (6%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD GI VA K+ Q ++ Y E+ LLK + N++ + K
Sbjct: 41 AFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEE 98
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ V ++ EL NL Q H +D + + Q+L G+ +LHS IIHRDLK
Sbjct: 99 FQDVYLVMELM-DANLCQV--IHMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPS 153
Query: 132 NIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMC 189
NI V + +KI D GLA A + T + APE + Y E VDI+S G
Sbjct: 154 NIVVKSD-CTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 212
Query: 190 ILEMVTFEYPYSECKNPAQIFKKVTS-GIKPASLAKVNDPQIKGFIEKCLVPASERLSAK 248
+ E+V + + Q K + G A P ++ ++E PA ++ +
Sbjct: 213 MGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVEN--RPAYPGIAFE 270
Query: 249 DLLKDPFLQVENQKEPI 265
+L D E++++ I
Sbjct: 271 ELFPDWIFPSESERDKI 287
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 62 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 119 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGA 175
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 176 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 68 VDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRD 127
V D K V ++TEL G L + K + I + YLHS ++HRD
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG--VVHRD 146
Query: 128 LKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPELYEEE-YNE 179
LK NI +GN ++I D G A ++ ++ TP F+APE+ + + Y+E
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTANFVAPEVLKRQGYDE 204
Query: 180 LVDIYSFGMCILEMVTFEYPYSE--CKNPAQIFKKVTSGIKPASLAKVN--DPQIKGFIE 235
DI+S G+ + M+ P++ P +I ++ SG S N K +
Sbjct: 205 GCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVS 264
Query: 236 KCL-VPASERLSAKDLLKDPFL 256
K L V +RL+AK +L+ P++
Sbjct: 265 KMLHVDPHQRLTAKQVLQHPWV 286
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 53 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 112
+SL+ N+V+F + + + M E + G L + + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVM--EYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 113 LVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGLA---IAMQQPTARSVIGTPEFM 168
+ Y H+ + HRDLK +N ++G+ +KI D G + + QP +S +GTP ++
Sbjct: 128 VSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP--KSAVGTPAYI 183
Query: 169 APE-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
APE L ++EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 109
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 110 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 166
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR--QYRKKHKNVDIKVIKN 104
+E +L+ + VV ++ + K + ++ L G+L+ Y
Sbjct: 233 NEKQILEKVNSRFVVSL--AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-PTARSVIG 163
+A +I GL LH I++RDLK +NI ++ +HG ++I DLGLA+ + + T + +G
Sbjct: 291 YAAEICCGLEDLHRER--IVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVG 347
Query: 164 TPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PA 220
T +MAPE+ + E Y D ++ G + EM+ + P+ + K + ++V +K P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKEVPE 406
Query: 221 SLAKVNDPQIKGFIEK--CLVPASERL-----SAKDLLKDPFLQVENQK 262
++ PQ + + C PA ERL SA+++ + P + N K
Sbjct: 407 EYSERFSPQARSLCSQLLCKDPA-ERLGCRGGSAREVKEHPLFKKLNFK 454
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 57 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 114 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGA 170
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 14/224 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL--RQYRKKHKNVD 98
D +++ +E+ ++ L N+++ Y ++ + K + ++ E G L R + + +
Sbjct: 129 DKEEVKNEISVMNQLDHANLIQLYDAF--ESKNDIVLVMEYVDGGELFDRIIDESYNLTE 186
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF-VNGNHGEVKIGDLGLAIAMQQPT 157
+ I + +QI G+ H H I+H DLK +NI VN + ++KI D GLA +
Sbjct: 187 LDTIL-FMKQICEGI--RHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243
Query: 158 ARSV-IGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTS 215
V GTPEF+APE+ ++ D++S G+ +++ P+ N A+ + +
Sbjct: 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFL-GDNDAETLNNILA 302
Query: 216 GIKPASLAKVND--PQIKGFIEKCLVP-ASERLSAKDLLKDPFL 256
+ D + K FI K L+ S R+SA + LK P+L
Sbjct: 303 CRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 52 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 108
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHRDL+ NI V+ KI D GLA I + TAR
Sbjct: 109 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGA 165
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 166 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVI 162
+A +I GL +L S II+RDLK DN+ ++ + G +KI D G+ T +
Sbjct: 126 YAAEIAIGLFFLQSKG--IIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFC 182
Query: 163 GTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--IKP 219
GTP+++APE+ + Y + VD ++FG+ + EM+ + P+ E ++ ++F+ + P
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDEDELFQSIMEHNVAYP 241
Query: 220 ASLAKVNDPQIKGFIEK 236
S++K KG + K
Sbjct: 242 KSMSKEAVAICKGLMTK 258
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 68 VDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRD 127
V D K V ++TEL G L + K + I + YLH+ ++HRD
Sbjct: 84 VYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG--VVHRD 141
Query: 128 LKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPELYEEE-YNE 179
LK NI +GN ++I D G A Q ++ TP F+APE+ E + Y+
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGF--AKQLRAENGLLMTPCYTANFVAPEVLERQGYDA 199
Query: 180 LVDIYSFGMCILEMVTFEYPYSECKN--PAQIFKKVTSG---IKPASLAKVNDPQIKGFI 234
DI+S G+ + M+T P++ + P +I ++ SG + V+D K +
Sbjct: 200 ACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA-KDLV 258
Query: 235 EKCL-VPASERLSAKDLLKDPFL 256
K L V +RL+A +L+ P++
Sbjct: 259 SKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 53 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 112
+SL+ N+V+F + + + M E + G L + + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVM--EYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 113 LVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGLA---IAMQQPTARSVIGTPEFM 168
+ Y H+ + HRDLK +N ++G+ +KI D G + + QP +S +GTP ++
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYI 183
Query: 169 APE-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
APE L ++EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 21/178 (11%)
Query: 39 PGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN 96
PG + + +E +++K+L+ D +VK + K+ + +ITE G+L + K +
Sbjct: 216 PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEG 272
Query: 97 VDIKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAM 153
+ K +++ QI G+ ++ N IHRDL+ NI V+ + KI D GLA +
Sbjct: 273 SKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARVGA 329
Query: 154 QQPTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
+ P ++ APE + D++SFG+ ++E+VT+ PY NP I
Sbjct: 330 KFPI--------KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 16/245 (6%)
Query: 23 IEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITE 80
+E A RV + + P L K + +E+ ++ L ++ + ++ D K + +I E
Sbjct: 71 VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED--KYEMVLILE 128
Query: 81 LFTSGNL--RQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
+ G L R + +K + +VI N+ RQ GL ++H H+ I+H D+K +NI
Sbjct: 129 FLSGGELFDRIAAEDYKMSEAEVI-NYMRQACEGLKHMHEHS--IVHLDIKPENIMCETK 185
Query: 139 HG-EVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVT 195
VKI D GLA + + T EF APE+ + E D+++ G+ +++
Sbjct: 186 KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS 245
Query: 196 FEYPYS--ECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLK 252
P++ + Q K+ + + V+ P+ K FI+ L +RL+ D L+
Sbjct: 246 GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVS-PEAKDFIKNLLQKEPRKRLTVHDALE 304
Query: 253 DPFLQ 257
P+L+
Sbjct: 305 HPWLK 309
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGXLLDYVREHKDNI 114
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM---- 153
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA +
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 171
Query: 154 QQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
++ A ++MA E + Y D++S+G+ + E++TF
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 117
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 118 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 174
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 116
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 173
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 64 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 120
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 121 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 177
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 178 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 55 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 111
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 112 GSQYLLNWCVQIAEGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 168
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 169 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 212
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 53 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 112
+SL+ N+V+F + + + M E + G L + + + +Q++ G
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVM--EYASGGELFERICNAGRFSEDEARFFFQQLISG 126
Query: 113 LVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGLA---IAMQQPTARSVIGTPEFM 168
+ Y H+ + HRDLK +N ++G+ +KI D G + + QP +S +GTP ++
Sbjct: 127 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYI 182
Query: 169 APE-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
APE L ++EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 183 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 229
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 121
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 122 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 178
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G+L + ++ + + + + ++ +I L YLH II+RDLK DN+ ++
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLD 155
Query: 137 GNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEM 193
+ G +K+ D G+ +P T GTP ++APE+ E+Y VD ++ G+ + EM
Sbjct: 156 -SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 214
Query: 194 VTFEYPY---SECKNPAQ 208
+ P+ NP Q
Sbjct: 215 MAGRSPFDIVGSSDNPDQ 232
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 101
+++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+ +
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQY 121
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTAR 159
+ NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 122 LLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYH 178
Query: 160 SVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 102/218 (46%), Gaps = 17/218 (7%)
Query: 51 LLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQIL 110
+LKS +V+ + +++ + + M EL + + ++ + +++ I+
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAM--ELMGTCAEKLKKRMQGPIPERILGKMTVAIV 134
Query: 111 HGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMA 169
L YL + +IHRD+K NI ++ G++K+ D G++ + A+ G +MA
Sbjct: 135 KALYYLKEKHG-VIHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMA 192
Query: 170 PELYEE------EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG---IKPA 220
PE + +Y+ D++S G+ ++E+ T ++PY CK ++ KV + P
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG 252
Query: 221 SLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQ 257
+ D Q F++ CL +R LL+ F++
Sbjct: 253 HMGFSGDFQ--SFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 117
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 118 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 174
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 114
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 171
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNM--ITELFTSGNLRQYRKKHKNVDIKVIKN 104
+E++ L+ +N++ F S + + + + IT G+L Y + +D
Sbjct: 80 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLR 138
Query: 105 WARQILHGLVYLH------SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
I GL +LH P I HRDLK NI V N G+ I DLGLA+ Q T
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTN 197
Query: 159 R------SVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 193
+ +GT +MAPE+ +E + VDI++FG+ + E+
Sbjct: 198 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 121
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 122 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 178
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G+L + ++ + + + + ++ +I L YLH II+RDLK DN+ ++
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLD 140
Query: 137 GNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEM 193
+ G +K+ D G+ +P T GTP ++APE+ E+Y VD ++ G+ + EM
Sbjct: 141 -SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 199
Query: 194 VTFEYPY---SECKNPAQ 208
+ P+ NP Q
Sbjct: 200 MAGRSPFDIVGSSDNPDQ 217
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 298 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 355
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHR+L N V NH VK+ D GL+ M T
Sbjct: 356 AVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENH-LVKVADFGLSRLMTGDTY 412
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 413 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 454
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 28/229 (12%)
Query: 48 EVHLLK-SLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--RKKHKNVDIKVIKN 104
EV LL+ S + NV++++ +K + I + L++Y +K ++ ++ I
Sbjct: 67 EVQLLRESDEHPNVIRYF---CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPI-T 122
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVK--IGDLG----LAIAMQQP 156
+Q GL +LHS N I+HRDLK NI ++ HG++K I D G LA+
Sbjct: 123 LLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180
Query: 157 TARS-VIGTPEFMAPELYEEEYNE----LVDIYSFGMCILEMVTFE--YPYSE-CKNPAQ 208
+ RS V GT ++APE+ E+ E VDI+S G C+ V E +P+ + + A
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAG-CVFYYVISEGSHPFGKSLQRQAN 239
Query: 209 IFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
I S + K D + IEK + + +R SAK +LK PF
Sbjct: 240 ILLGACS-LDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G+L + ++ + + + + ++ +I L YLH II+RDLK DN+ ++
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLD 144
Query: 137 GNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEM 193
+ G +K+ D G+ +P T GTP ++APE+ E+Y VD ++ G+ + EM
Sbjct: 145 -SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203
Query: 194 VTFEYPY---SECKNPAQ 208
+ P+ NP Q
Sbjct: 204 MAGRSPFDIVGSSDNPDQ 221
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
+KI D L DL ++ +E+ LK+L+ ++ + Y V + + M+ E G L
Sbjct: 40 IKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYH--VLETANKIFMVLEYCPGGELFD 97
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
Y + + + RQI+ + Y+HS HRDLK +N+ + H ++K+ D GL
Sbjct: 98 YIISQDRLSEEETRVVFRQIVSAVAYVHSQG--YAHRDLKPENLLFDEYH-KLKLIDFGL 154
Query: 150 AI---AMQQPTARSVIGTPEFMAPELYEEE--YNELVDIYSFGMCILEMVTFEYPYSECK 204
+ ++ G+ + APEL + + D++S G+ + ++ P+ +
Sbjct: 155 CAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD-D 213
Query: 205 NPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 256
N ++KK+ G + K P +++ L V +R+S K+LL P++
Sbjct: 214 NVMALYKKIMRG--KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 114
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 171
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 83 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 139
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 140 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 196
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 197 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 240
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 92 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 148
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 149 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 205
Query: 156 PTARSVIG-TP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G P ++MA E + Y D++S+G+ + E++TF
Sbjct: 206 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 249
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 68 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 124
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 125 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 181
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 182 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 225
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+
Sbjct: 256 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 313
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHR+L N V NH VK+ D GL+ M T
Sbjct: 314 AVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENH-LVKVADFGLSRLMTGDTY 370
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 371 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 412
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 116/223 (52%), Gaps = 15/223 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+++ EV +L+ + N++ + + + + V +I EL + G L + + +++ +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA- 158
++ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA ++
Sbjct: 118 TSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 159 RSVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVT 214
+++ GTPEF+APE+ E L D++S G+ +++ P+ ++ + A I V+
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVS 234
Query: 215 SGIKPASLAKVNDPQIKGFIEKCLVPAS-ERLSAKDLLKDPFL 256
++ ++ K FI K LV + +RL+ ++ L+ P++
Sbjct: 235 YDFDEEFFSQTSELA-KDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V
Sbjct: 259 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 316
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHR+L N V NH VK+ D GL+ M T
Sbjct: 317 AVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENH-LVKVADFGLSRLMTGDTY 373
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 415
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +I E T GNL Y ++ + V+
Sbjct: 53 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVN 110
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 111 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTX 167
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 168 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 209
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 114
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 171
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 52 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 108
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 109 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 165
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 209
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 29/199 (14%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSW------ 67
+KA G RVK ++ +K EV L L N+V + W
Sbjct: 28 FKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYD 79
Query: 68 --------VDDKKKTVNMITELFTSGNLRQY--RKKHKNVDIKVIKNWARQILHGLVYLH 117
K K + + E G L Q+ +++ + +D + QI G+ Y+H
Sbjct: 80 PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH 139
Query: 118 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMAPE-LYEE 175
S +I+RDLK NIF+ + +VKIGD GL +++ R GT +M+PE + +
Sbjct: 140 S--KKLINRDLKPSNIFLV-DTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQ 196
Query: 176 EYNELVDIYSFGMCILEMV 194
+Y + VD+Y+ G+ + E++
Sbjct: 197 DYGKEVDLYALGLILAELL 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 40/249 (16%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 107
E+ +LK LK N+V + V +K+ ++++ E L + + + V ++K+
Sbjct: 52 EIRMLKQLKHPNLVNLLE--VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW 109
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT--ARSVIGTP 165
Q L + + H HN IHRD+K +NI + H +K+ D G A + P+ + T
Sbjct: 110 QTLQAVNFCHKHN--CIHRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYDDEVATR 166
Query: 166 EFMAPELY--EEEYNELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPA- 220
+ +PEL + +Y VD+++ G E+++ +P + + +K + P
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRH 226
Query: 221 ----------SLAKVNDPQ---------------IKGFIEKCL-VPASERLSAKDLLKDP 254
S K+ DP+ G ++ CL + +ERL+ + LL P
Sbjct: 227 QQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP 286
Query: 255 FLQVENQKE 263
+ EN +E
Sbjct: 287 YF--ENIRE 293
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNM--ITELFTSGNLRQYRKKHKNVDIKVIKN 104
+E++ L+ +N++ F S + + + + IT G+L Y + +D
Sbjct: 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLR 109
Query: 105 WARQILHGLVYLH------SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
I GL +LH P I HRDLK NI V N G+ I DLGLA+ Q T
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTN 168
Query: 159 R------SVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 193
+ +GT +MAPE+ +E + VDI++FG+ + E+
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNM--ITELFTSGNLRQYRKKHKNVDIKVIKN 104
+E++ L+ +N++ F S + + + + IT G+L Y + +D
Sbjct: 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLR 109
Query: 105 WARQILHGLVYLH------SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
I GL +LH P I HRDLK NI V N G+ I DLGLA+ Q T
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTN 168
Query: 159 R------SVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 193
+ +GT +MAPE+ +E + VDI++FG+ + E+
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +I E T GNL Y ++ + V+
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVN 114
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 115 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 171
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 60 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 119
+V+FY + + + M EL ++ + Y+ + +D + + +I V +H
Sbjct: 83 IVQFYGALFREGDCWICM--ELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 120 ---NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE- 174
N IIHRD+K NI ++ G +K+ D G++ + A++ G +MAPE +
Sbjct: 141 LKENLKIIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDP 199
Query: 175 ----EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVND- 227
+ Y+ D++S G+ + E+ T +PY + + +F ++T +K P L+ +
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS---VFDQLTQVVKGDPPQLSNSEER 256
Query: 228 ---PQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 262
P F+ CL S+R K+LLK PF+ + ++
Sbjct: 257 EFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEER 295
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 37 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 94
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 151
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 60 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 119
VV+ + ++ DDK + M+ E G+L + +V K K + +++ L +HS
Sbjct: 137 VVQLFCAFQDDK--YLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSM 193
Query: 120 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---ARSVIGTPEFMAPELYEEE 176
+IHRD+K DN+ ++ HG +K+ D G + M + + +GTP++++PE+ + +
Sbjct: 194 G--LIHRDVKPDNMLLD-KHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQ 250
Query: 177 -----YNELVDIYSFGMCILEMVTFEYPY 200
Y D +S G+ + EM+ + P+
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G L + + + + + + +I+ L YLHS + +++RD+K +N+ ++
Sbjct: 85 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLD 142
Query: 137 GNHGEVKIGDLGLAI--AMQQPTARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEM 193
+ G +KI D GL T ++ GTPE++APE+ E+ +Y VD + G+ + EM
Sbjct: 143 KD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 201
Query: 194 VTFEYPY 200
+ P+
Sbjct: 202 MCGRLPF 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G L + + + + + + +I+ L YLHS + +++RD+K +N+ ++
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLD 139
Query: 137 GNHGEVKIGDLGLAI--AMQQPTARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEM 193
+ G +KI D GL T ++ GTPE++APE+ E+ +Y VD + G+ + EM
Sbjct: 140 KD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
Query: 194 VTFEYPY 200
+ P+
Sbjct: 199 MCGRLPF 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G L + + + + + + +I+ L YLHS + +++RD+K +N+ ++
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLD 139
Query: 137 GNHGEVKIGDLGLAI--AMQQPTARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEM 193
+ G +KI D GL T ++ GTPE++APE+ E+ +Y VD + G+ + EM
Sbjct: 140 KD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
Query: 194 VTFEYPY 200
+ P+
Sbjct: 199 MCGRLPF 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 53 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 109
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 162
A QI G+ ++ N IHR+L+ NI V+ KI D GLA I + TAR
Sbjct: 110 MAAQIAEGMAFIEERN--YIHRNLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGA 166
Query: 163 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 209
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 167 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVI 162
+ +I+ L YLHS +++RDLK +N+ ++ + G +KI D GL T ++
Sbjct: 253 YGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFC 310
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPY 200
GTPE++APE+ E+ +Y VD + G+ + EM+ P+
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVI 162
+ +I+ L YLHS +++RDLK +N+ ++ + G +KI D GL T ++
Sbjct: 256 YGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFC 313
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPY 200
GTPE++APE+ E+ +Y VD + G+ + EM+ P+
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I E + GNLR+Y
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGM 140
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMK 197
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 253 D 253
D
Sbjct: 312 D 312
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I E + GNLR+Y
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGM 140
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 141 EXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMK 197
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 253 D 253
D
Sbjct: 312 D 312
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +I E T GNL Y ++ + V
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVS 109
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 110 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 166
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V ++ +I E T GNL Y ++ + V
Sbjct: 52 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVS 109
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 110 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTY 166
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ------------ 155
QI + +LHS ++HRDLK NIF + VK+GD GL AM Q
Sbjct: 172 QIAEAVEFLHSKG--LMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 156 --PTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKK 212
T +GT +M+PE ++ Y+ VDI+S G+ + E++ Y +S +I
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YSFSTQMERVRIITD 285
Query: 213 VTSGIKPASLAKVNDPQIKGFIEKCLVPA-SERLSAKDLLKDPFLQ 257
V + +K L PQ ++ L P+ +ER A D++++ +
Sbjct: 286 VRN-LKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQY--LFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G L + + + + + + +I+ L YLHS + +++RD+K +N+ ++
Sbjct: 87 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLD 144
Query: 137 GNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEM 193
+ G +KI D GL T + GTPE++APE+ E+ +Y VD + G+ + EM
Sbjct: 145 KD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
Query: 194 VTFEYPY 200
+ P+
Sbjct: 204 MCGRLPF 210
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + + E + G L
Sbjct: 37 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY--LFLEYCSGGELFD 94
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 151
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + + E + G L
Sbjct: 37 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY--LFLEYCSGGELFD 94
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 151
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + + E + G L
Sbjct: 37 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY--LFLEYCSGGELFD 94
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 151
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 37 VKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 94
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 151
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 152 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G L + + + + + + +I+ L YLHS + +++RD+K +N+ ++
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLD 139
Query: 137 GNHGEVKIGDLGLAI--AMQQPTARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEM 193
+ G +KI D GL T + GTPE++APE+ E+ +Y VD + G+ + EM
Sbjct: 140 KD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
Query: 194 VTFEYPY 200
+ P+
Sbjct: 199 MCGRLPF 205
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL-RQYRKKHKNVDI 99
D + + E+ + L+ +V + ++ DD + MI E + G L + +H +
Sbjct: 197 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV--MIYEFMSGGELFEKVADEHNKMSE 254
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNI-FVNGNHGEVKIGDLGLAIAMQ-QPT 157
+ RQ+ GL ++H +N +H DLK +NI F E+K+ D GL + + +
Sbjct: 255 DEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312
Query: 158 ARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTS- 215
+ GT EF APE+ E + D++S G+ +++ P+ +N + + V S
Sbjct: 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSC 371
Query: 216 --GIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVEN 260
+ ++ + +++ K FI K L+ + R++ L+ P+L N
Sbjct: 372 DWNMDDSAFSGISE-DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 418
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 101
+++ E +++ S+ + +V + + TV +I +L G L Y ++HK N+ +
Sbjct: 66 KEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQY 122
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTAR 159
+ NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 123 LLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYH 179
Query: 160 SVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 180 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 219
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +I +L G L Y ++HK N+
Sbjct: 59 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGXLLDYVREHKDNI 115
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 116 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 172
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 173 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G L + + + + + + +I+ L YLHS + +++RD+K +N+ ++
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLD 139
Query: 137 GNHGEVKIGDLGLAI--AMQQPTARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEM 193
+ G +KI D GL T + GTPE++APE+ E+ +Y VD + G+ + EM
Sbjct: 140 KD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
Query: 194 VTFEYPY 200
+ P+
Sbjct: 199 MCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
+ E G L + + + + + + +I+ L YLHS + +++RD+K +N+ ++
Sbjct: 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLD 139
Query: 137 GNHGEVKIGDLGLAI--AMQQPTARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEM 193
+ G +KI D GL T + GTPE++APE+ E+ +Y VD + G+ + EM
Sbjct: 140 KD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
Query: 194 VTFEYPY 200
+ P+
Sbjct: 199 MCGRLPF 205
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +I +L G L Y ++HK N+
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNI 121
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 122 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 178
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +I +L G L Y ++HK N+
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNI 116
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 173
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + + E + G L
Sbjct: 35 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY--LFLEYCSGGELFD 92
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 93 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 149
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 150 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 209
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 210 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 260
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 36/170 (21%)
Query: 55 LKDDNVVKFYKSWVDDKKKTVN------MITELFTSGNLRQYRKKHKNVDIKVIKNWARQ 108
++ DN+ +F V D++ T + ++ E + +G+L +Y H + + + A
Sbjct: 64 MEHDNIARFI---VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCR-LAHS 119
Query: 109 ILHGLVYLHS-------HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-------- 153
+ GL YLH+ + P I HRDL N+ V N G I D GL++ +
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK-NDGTCVISDFGLSMRLTGNRLVRP 178
Query: 154 --QQPTARSVIGTPEFMAPELYEEEYN--------ELVDIYSFGMCILEM 193
+ A S +GT +MAPE+ E N + VD+Y+ G+ E+
Sbjct: 179 GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I E + GNLR+Y
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGM 140
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMK 197
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 253 D 253
D
Sbjct: 312 D 312
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 37 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 94
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 151
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY--LFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL-RQYRKKHKNVDI 99
D + + E+ + L+ +V + ++ DD + MI E + G L + +H +
Sbjct: 91 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV--MIYEFMSGGELFEKVADEHNKMSE 148
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNI-FVNGNHGEVKIGDLGLAIAMQ-QPT 157
+ RQ+ GL ++H +N +H DLK +NI F E+K+ D GL + + +
Sbjct: 149 DEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 206
Query: 158 ARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTS- 215
+ GT EF APE+ E + D++S G+ +++ P+ +N + + V S
Sbjct: 207 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSC 265
Query: 216 --GIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVEN 260
+ ++ + +++ K FI K L+ + R++ L+ P+L N
Sbjct: 266 DWNMDDSAFSGISE-DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 312
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 37 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 94
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 151
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I E + GNLR+Y
Sbjct: 75 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGM 132
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 133 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMK 189
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 190 IADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 248
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 249 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 303
Query: 253 D 253
D
Sbjct: 304 D 304
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I E + GNLR+Y
Sbjct: 72 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGM 129
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 130 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMK 186
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 187 IADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 245
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 246 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 300
Query: 253 D 253
D
Sbjct: 301 D 301
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I E + GNLR+Y
Sbjct: 129 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGM 186
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 187 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMK 243
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 244 IADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 303 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 357
Query: 253 D 253
D
Sbjct: 358 D 358
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I E + GNLR+Y
Sbjct: 70 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGM 127
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 128 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTENN-VMK 184
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 185 IADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 243
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 244 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 298
Query: 253 D 253
D
Sbjct: 299 D 299
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVI 162
+ +I+ L YLHS +++RDLK +N+ ++ + G +KI D GL T +
Sbjct: 115 YGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFC 172
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPY 200
GTPE++APE+ E+ +Y VD + G+ + EM+ P+
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I E + GNLR+Y
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGM 140
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMK 197
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 253 D 253
D
Sbjct: 312 D 312
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +I +L G L Y ++HK N+
Sbjct: 59 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNI 115
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 116 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 172
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 173 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +I +L G L Y ++HK N+
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNI 114
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 171
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +I +L G L Y ++HK N+
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNI 117
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D GLA + ++
Sbjct: 118 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEE 174
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVI 162
+ +I+ L YLHS +++RDLK +N+ ++ + G +KI D GL T +
Sbjct: 113 YGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFC 170
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPY 200
GTPE++APE+ E+ +Y VD + G+ + EM+ P+
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I E + GNLR+Y
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGM 140
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMK 197
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 253 D 253
D
Sbjct: 312 D 312
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ--PTARSVI 162
+ +I+ L YLHS +++RDLK +N+ ++ + G +KI D GL + T +
Sbjct: 114 YGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFC 171
Query: 163 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPY 200
GTPE++APE+ E+ +Y VD + G+ + EM+ P+
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 65 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 121
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D G A + ++
Sbjct: 122 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEE 178
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 68 VDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRD 127
V D K V ++TEL G L + K + I + YLH+ ++HRD
Sbjct: 84 VYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG--VVHRD 141
Query: 128 LKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPELYEEE-YNE 179
LK NI +GN ++I D G A Q ++ TP F+APE+ E + Y+
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGF--AKQLRAENGLLXTPCYTANFVAPEVLERQGYDA 199
Query: 180 LVDIYSFGMCILEMVTFEYPYSECKN--PAQIFKKVTSG---IKPASLAKVNDPQIKGFI 234
DI+S G+ + +T P++ + P +I ++ SG + V+D K +
Sbjct: 200 ACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA-KDLV 258
Query: 235 EKCL-VPASERLSAKDLLKDPFL 256
K L V +RL+A +L+ P++
Sbjct: 259 SKXLHVDPHQRLTAALVLRHPWI 281
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
++ +L G L Y + + K + R +L + LH N I+HRDLK +NI ++
Sbjct: 101 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLD 158
Query: 137 GNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYEEE-------YNELVDIYSFGM 188
+ +K+ D G + + RSV GTP ++APE+ E Y + VD++S G+
Sbjct: 159 DDMN-IKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 189 CILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVND--PQIKGFIEKCL-VPASERL 245
+ ++ P+ K + + + SG + +D +K + + L V +R
Sbjct: 218 IMYTLLAGSPPFWHRKQ-MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 276
Query: 246 SAKDLLKDPFLQ 257
+A++ L PF Q
Sbjct: 277 TAEEALAHPFFQ 288
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 116
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D G A + ++
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEE 173
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I E + GNLR+Y
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGM 140
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMK 197
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 198 IADFGLARDINNIDYYKNTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 253 D 253
D
Sbjct: 312 D 312
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK N+
Sbjct: 58 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNI 114
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D G A + ++
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEE 171
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 53 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 112
+SL+ N+V+F + + + M E + G L + + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVM--EYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 113 LVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGLA---IAMQQPTARSVIGTPEFM 168
+ Y H+ + HRDLK +N ++G+ +KI G + + QP +S +GTP ++
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP--KSTVGTPAYI 183
Query: 169 APE-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
APE L ++EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + K L +NVVKFY + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 93
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 211 SDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 261
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 28/171 (16%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKT-----VNMITELFTSGNLRQYRKKHKNVDIKVI 102
EV+ L +K +N+++F + +K+ T + +IT G+L + K + V +
Sbjct: 68 EVYSLPGMKHENILQFIGA---EKRGTSVDVDLWLITAFHEKGSLSDFLKANV-VSWNEL 123
Query: 103 KNWARQILHGLVYLH--------SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ 154
+ A + GL YLH H P I HRD+K N+ + N I D GLA+ +
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFE 182
Query: 155 QPTA----RSVIGTPEFMAPELYEEEYN------ELVDIYSFGMCILEMVT 195
+ +GT +MAPE+ E N +D+Y+ G+ + E+ +
Sbjct: 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 60 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 119
VVK + ++ + K + +I + G+L K + +K + ++ GL +LHS
Sbjct: 92 VVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 120 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM--QQPTARSVIGTPEFMAPELYEEE- 176
II+RDLK +NI ++ G +K+ D GL+ + A S GT E+MAPE+ +
Sbjct: 150 G--IIYRDLKPENILLD-EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 177 YNELVDIYSFGMCILEMVTFEYPY 200
++ D +S+G+ + EM+T P+
Sbjct: 207 HSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL-- 116
N+VK ++ + D + ++ EL G L + KK K+ + A I+ LV
Sbjct: 67 NIVKLHEVFHD--QLHTFLVMELLNGGELFERIKKKKHFS----ETEASYIMRKLVSAVS 120
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFM----APEL 172
H H+ ++HRDLK +N+ + ++I + A +P + TP F APEL
Sbjct: 121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL 180
Query: 173 YEEE-YNELVDIYSFGMCILEMVTFEYPYSE------CKNPAQIFKKVTSG 216
+ Y+E D++S G+ + M++ + P+ C + +I KK+ G
Sbjct: 181 LNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 22/192 (11%)
Query: 75 VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
VN+ EL G+L Q K+ + + Q L GL YLHS I+H D+K DN+
Sbjct: 160 VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR--ILHGDVKADNVL 217
Query: 135 VNGNHGEVKIGDLGLAIAMQQP-------TARSVIGTPEFMAPE-LYEEEYNELVDIYSF 186
++ + + D G A+ +Q T + GT MAPE + + VD++S
Sbjct: 218 LSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSS 277
Query: 187 GMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVPASERLS 246
+L M+ +P++ Q F+ P L ++P I P + +
Sbjct: 278 CCMMLHMLNGCHPWT------QFFR------GPLCLKIASEPPPVREIPPSCAPLTAQAI 325
Query: 247 AKDLLKDPFLQV 258
+ L K+P +V
Sbjct: 326 QEGLRKEPIHRV 337
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I E + GNLR+Y
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGM 140
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ ++
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMR 197
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 253 D 253
D
Sbjct: 312 D 312
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWA 106
E ++ N+++ V K K + +ITE +G L ++ R+K + +
Sbjct: 96 EAGIMGQFSHHNIIRL--EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML 153
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTP 165
R I G+ YL + N +HRDL NI VN N K+ D GL+ ++ P A
Sbjct: 154 RGIAAGMKYLANMN--YVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDPEATYTTSGG 210
Query: 166 E----FMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ + APE + ++ D++SFG+ + E++T+ E PY E N ++ K + G +
Sbjct: 211 KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVMKAINDGFR 268
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 27/252 (10%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++TE + G
Sbjct: 292 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKG 346
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 347 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 403
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 404 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 462
Query: 198 YPYSECKNPAQIFKKVTSGIK----PASLAKVNDPQIKGFI-EKCLVPASERLSAKDLLK 252
PY N ++ +V G + P ++D + + E P E L A L+
Sbjct: 463 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA--FLE 519
Query: 253 DPFLQVENQKEP 264
D F E Q +P
Sbjct: 520 DYFTSTEPQXQP 531
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 14/178 (7%)
Query: 45 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY---RKKHKNVDIKV 101
L +E+ +LK +K +N+V + + ++ +L + G L R + D +
Sbjct: 53 LENEIAVLKKIKHENIVTLED--IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL 110
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF--VNGNHGEVKIGDLGLAIAMQQPTAR 159
+ +Q+L + YLH + I+HRDLK +N+ + ++ I D GL+ Q
Sbjct: 111 V---IQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165
Query: 160 SVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
+ GTP ++APE L ++ Y++ VD +S G+ ++ P+ E + +++F+K+ G
Sbjct: 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE-ETESKLFEKIKEG 222
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 18/177 (10%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++TE + G
Sbjct: 33 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIXIVTEYMSKG 87
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 88 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 144
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 145 VADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTT 200
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 31/203 (15%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYK-------S 66
+ A D VA ++ + D P ++ E+ +++ L DN+VK ++
Sbjct: 28 FSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQ 83
Query: 67 WVDDKKKTVNMITELFTSGNLRQYRKKH-KNV--DIKVIKNWAR----QILHGLVYLHSH 119
DD V +TEL + +++Y + NV +++ AR Q+L GL Y+HS
Sbjct: 84 LTDD----VGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA 139
Query: 120 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----QQPTARSVIGTPEFMAPELY- 173
N ++HRDLK N+F+N +KIGD GLA M + + T + +P L
Sbjct: 140 N--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLL 197
Query: 174 -EEEYNELVDIYSFGMCILEMVT 195
Y + +D+++ G EM+T
Sbjct: 198 SPNNYTKAIDMWAAGCIFAEMLT 220
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 111 HGLVYLHSH-NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM---QQPTARSVIGTPE 166
GL YLH H +P IIHRD+K NI ++ E +GD GLA M +V GT
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 200
+APE L + +E D++ +G+ +LE++T + +
Sbjct: 209 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 22/192 (11%)
Query: 75 VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
VN+ EL G+L Q K+ + + Q L GL YLHS I+H D+K DN+
Sbjct: 141 VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR--ILHGDVKADNVL 198
Query: 135 VNGNHGEVKIGDLGLAIAMQQP-------TARSVIGTPEFMAPE-LYEEEYNELVDIYSF 186
++ + + D G A+ +Q T + GT MAPE + + VD++S
Sbjct: 199 LSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSS 258
Query: 187 GMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVPASERLS 246
+L M+ +P++ Q F+ P L ++P I P + +
Sbjct: 259 CCMMLHMLNGCHPWT------QFFR------GPLCLKIASEPPPVREIPPSCAPLTAQAI 306
Query: 247 AKDLLKDPFLQV 258
+ L K+P +V
Sbjct: 307 QEGLRKEPIHRV 318
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNH--GEVKIGDLGLAIAMQQP 156
I++IK QIL G+ YLH +N I+H DLK NI ++ + G++KI D G++ +
Sbjct: 134 IRLIK----QILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187
Query: 157 TA-RSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPY 200
R ++GTPE++APE+ + D+++ G+ ++T P+
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 43/260 (16%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG++ + E ++K L+ + +V+ Y ++ + ++TE + G
Sbjct: 210 TRVAIKTLK--PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKG 264
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 265 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 321
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GL I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 322 VADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 380
Query: 198 YPYSECKNPAQIFKKVTSGIK-------PASLAKV------NDPQIKGFIEKCLVPASER 244
PY N ++ +V G + P SL + DP+ + P E
Sbjct: 381 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEER--------PTFEY 431
Query: 245 LSAKDLLKDPFLQVENQKEP 264
L A L+D F E Q +P
Sbjct: 432 LQA--FLEDYFTSTEPQXQP 449
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 27/252 (10%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++TE + G
Sbjct: 209 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKG 263
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 320
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 321 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 379
Query: 198 YPYSECKNPAQIFKKVTSGIK----PASLAKVNDPQIKGFI-EKCLVPASERLSAKDLLK 252
PY N ++ +V G + P ++D + + E P E L A L+
Sbjct: 380 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA--FLE 436
Query: 253 DPFLQVENQKEP 264
D F E Q +P
Sbjct: 437 DYFTSTEPQXQP 448
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 101
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKFSLDLAS 112
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 161
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T
Sbjct: 113 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTXXKA 169
Query: 162 IGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 205
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 43/260 (16%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++TE + G
Sbjct: 32 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKG 86
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 87 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 143
Query: 144 IGDLGLAIAMQ--QPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA ++ + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 144 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 202
Query: 198 YPYSECKNPAQIFKKVTSGIK-------PASLAKV------NDPQIKGFIEKCLVPASER 244
PY N ++ +V G + P SL + DP+ + P E
Sbjct: 203 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEER--------PTFEY 253
Query: 245 LSAKDLLKDPFLQVENQKEP 264
L A L+D F E Q +P
Sbjct: 254 LQA--FLEDYFTSTEPQYQP 271
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA----MQQPTARSV 161
A+ +G+ +LH ++ IHRD+K NI ++ KI D GLA A Q +
Sbjct: 139 AQGAANGINFLHENHH--IHRDIKSANILLDEAF-TAKISDFGLARASEKFAQTVMXSRI 195
Query: 162 IGTPEFMAPELYEEEYNELVDIYSFGMCILEMVT 195
+GT +MAPE E DIYSFG+ +LE++T
Sbjct: 196 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 43/260 (16%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++TE + G
Sbjct: 43 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKG 97
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 98 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 154
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 213
Query: 198 YPYSECKNPAQIFKKVTSGIK-------PASLAKV------NDPQIKGFIEKCLVPASER 244
PY N ++ +V G + P SL + DP+ + P E
Sbjct: 214 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEER--------PTFEY 264
Query: 245 LSAKDLLKDPFLQVENQKEP 264
L A L+D F E Q +P
Sbjct: 265 LQA--FLEDYFTSTEPQYQP 282
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
++ +L G L Y + + K + R +L + LH N I+HRDLK +NI ++
Sbjct: 88 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLD 145
Query: 137 GNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYEEE-------YNELVDIYSFGM 188
+ +K+ D G + + R V GTP ++APE+ E Y + VD++S G+
Sbjct: 146 DDMN-IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 204
Query: 189 CILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVND--PQIKGFIEKCL-VPASERL 245
+ ++ P+ K + + + SG + +D +K + + L V +R
Sbjct: 205 IMYTLLAGSPPFWHRKQ-MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 263
Query: 246 SAKDLLKDPFLQ 257
+A++ L PF Q
Sbjct: 264 TAEEALAHPFFQ 275
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA----MQQPTARSV 161
A+ +G+ +LH ++ IHRD+K NI ++ KI D GLA A Q +
Sbjct: 139 AQGAANGINFLHENHH--IHRDIKSANILLDEAF-TAKISDFGLARASEKFAQTVMXXRI 195
Query: 162 IGTPEFMAPELYEEEYNELVDIYSFGMCILEMVT 195
+GT +MAPE E DIYSFG+ +LE++T
Sbjct: 196 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 43/260 (16%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++TE + G
Sbjct: 34 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKG 88
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 89 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 145
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 146 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 204
Query: 198 YPYSECKNPAQIFKKVTSGIK-------PASLAKV------NDPQIKGFIEKCLVPASER 244
PY N ++ +V G + P SL + DP+ + P E
Sbjct: 205 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEER--------PTFEY 255
Query: 245 LSAKDLLKDPFLQVENQKEP 264
L A L+D F E Q +P
Sbjct: 256 LQA--FLEDYFTSTEPQYQP 273
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA----MQQPTARSV 161
A+ +G+ +LH ++ IHRD+K NI ++ KI D GLA A Q +
Sbjct: 133 AQGAANGINFLHENHH--IHRDIKSANILLDEAF-TAKISDFGLARASEKFAQXVMXXRI 189
Query: 162 IGTPEFMAPELYEEEYNELVDIYSFGMCILEMVT 195
+GT +MAPE E DIYSFG+ +LE++T
Sbjct: 190 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 41 DLQKLYSEVHLLKS--LKDDNVVKFYKSWVDDKKKTVNM--ITELFTSGNL-----RQYR 91
D Q + E + + L+ DN++ F S + + + + IT G+L RQ
Sbjct: 43 DEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTL 102
Query: 92 KKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAI 151
+ H + + V LH ++ P I HRD K N+ V N + I DLGLA+
Sbjct: 103 EPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNL-QCCIADLGLAV 161
Query: 152 AMQQPT------ARSVIGTPEFMAPELYEE-------EYNELVDIYSFGMCILEM 193
Q + +GT +MAPE+ +E E + DI++FG+ + E+
Sbjct: 162 MHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 27/252 (10%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++TE + G
Sbjct: 209 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVTEYMSKG 263
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 320
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 321 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 379
Query: 198 YPYSECKNPAQIFKKVTSGIK----PASLAKVNDPQIKGFI-EKCLVPASERLSAKDLLK 252
PY N ++ +V G + P ++D + + E P E L A L+
Sbjct: 380 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA--FLE 436
Query: 253 DPFLQVENQKEP 264
D F E Q +P
Sbjct: 437 DYFTSTEPQYQP 448
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 12/231 (5%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ 89
VKI D+ + + + E+ + L +NVVKFY + + E + G L
Sbjct: 37 VKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 94
Query: 90 YRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
+ + + + Q++ G+VYLH I HRD+K +N+ ++ +KI D GL
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 151
Query: 150 AIAMQQPTARSVI----GTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 203
A + ++ GT ++APEL + E + E VD++S G+ + M+ E P+ +
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211
Query: 204 KNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 253
+ Q + + K D + K LV S R++ D+ KD
Sbjct: 212 SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 77 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
++ +L G L Y + + K + R +L + LH N I+HRDLK +NI ++
Sbjct: 101 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLD 158
Query: 137 GNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYEEE-------YNELVDIYSFGM 188
+ +K+ D G + + R V GTP ++APE+ E Y + VD++S G+
Sbjct: 159 DDMN-IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 189 CILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVND--PQIKGFIEKCL-VPASERL 245
+ ++ P+ K + + + SG + +D +K + + L V +R
Sbjct: 218 IMYTLLAGSPPFWHRKQ-MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 276
Query: 246 SAKDLLKDPFLQ 257
+A++ L PF Q
Sbjct: 277 TAEEALAHPFFQ 288
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 18/177 (10%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++TE + G
Sbjct: 36 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKG 90
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 91 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 147
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 148 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTT 203
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 85/198 (42%), Gaps = 41/198 (20%)
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 161
I+ Q+L GL Y+HS ++HRDLK N+ VN + E+KI D GLA V
Sbjct: 128 IQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNED-CELKILDFGLARHADAEMTGYV 184
Query: 162 IGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK--KVTSGI 217
+ T + APE L YN+ VDI+S G + EM+T + + Q+ + KVT
Sbjct: 185 V-TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 243
Query: 218 KPASLAKVND--------------------------PQIKGFIEKCL-VPASERLSAKDL 250
+ K+ND PQ +EK L + +RL+A
Sbjct: 244 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA 303
Query: 251 LKDPFLQVENQKEPICDP 268
L PF EP DP
Sbjct: 304 LTHPFF------EPFRDP 315
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I + GNLR+Y
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVAYASKGNLREYLRARRPPGM 140
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMK 197
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 253 D 253
D
Sbjct: 312 D 312
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 101
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 117
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 158
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 118 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 174
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 205
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 223
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 101
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 140
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 158
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 141 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 197
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 205
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 198 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 246
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK---- 95
DL L SE+ ++K + K N++ + D V I E + GNLR+Y + +
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGL 133
Query: 96 ------------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+ K + + A Q+ G+ YL S IHRDL N+ V ++ +K
Sbjct: 134 EFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMK 190
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 191 IADFGLARDIHHIDXXKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 53 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 112
+SL+ N+V+F + + + M E + G L + + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVM--EYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 113 LVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGLA---IAMQQPTARSVIGTPEFM 168
+ Y H+ + HRDLK +N ++G+ +KI G + + QP + +GTP ++
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP--KDTVGTPAYI 183
Query: 169 APE-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
APE L ++EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 101
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 115
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 158
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 116 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 172
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 205
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 173 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 85/198 (42%), Gaps = 41/198 (20%)
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 161
I+ Q+L GL Y+HS ++HRDLK N+ VN + E+KI D GLA V
Sbjct: 146 IQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNED-CELKILDFGLARHADAEMTGYV 202
Query: 162 IGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK--KVTSGI 217
+ T + APE L YN+ VDI+S G + EM+T + + Q+ + KVT
Sbjct: 203 V-TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 261
Query: 218 KPASLAKVND--------------------------PQIKGFIEKCL-VPASERLSAKDL 250
+ K+ND PQ +EK L + +RL+A
Sbjct: 262 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA 321
Query: 251 LKDPFLQVENQKEPICDP 268
L PF EP DP
Sbjct: 322 LTHPFF------EPFRDP 333
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +I +L G L Y ++HK N+
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNI 116
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D G A + ++
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEE 173
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +I +L G L Y ++HK N+
Sbjct: 60 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNI 116
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D G A + ++
Sbjct: 117 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEE 173
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 101
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 114
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 158
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 115 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 171
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 205
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 172 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM--QQPTARSVIGTPEFMAPELYE 174
H H+ II+RDLK +NI ++ G +K+ D GL+ + A S GT E+MAPE+
Sbjct: 142 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 175 EE-YNELVDIYSFGMCILEMVTFEYPY 200
+ + D +SFG+ + EM+T P+
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM--QQPTARSVIGTPEFMAPELYE 174
H H+ II+RDLK +NI ++ G +K+ D GL+ + A S GT E+MAPE+
Sbjct: 141 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 175 EE-YNELVDIYSFGMCILEMVTFEYPY 200
+ + D +SFG+ + EM+T P+
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY--------- 90
DL L SE+ ++K + K N++ + D V I + GNLR+Y
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVGYASKGNLREYLRARRPPGM 140
Query: 91 -------RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
R + + K + + Q+ G+ YL S IHRDL N+ V N+ +K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMK 197
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KPA+ ++ + C VP S+R + K L++
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 253 D 253
D
Sbjct: 312 D 312
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 101
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 112
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 158
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 113 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 169
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 205
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKV 101
+K SE ++K+L ++VK + +++ T +I EL+ G L Y +++KN + +
Sbjct: 70 EKFMSEAVIMKNLDHPHIVKLIG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLT 126
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTAR 159
+ ++ QI + YL S N +HRD+ NI V VK+GD GL+ I +
Sbjct: 127 LVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKA 183
Query: 160 SVIGTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
SV P ++M+PE + + D++ F +C+ E+++F
Sbjct: 184 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSF 222
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 43/260 (16%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K ++ + +V+ Y ++ + ++TE + G
Sbjct: 43 TRVAIKTLK--PGTMSPEAFLQEAQVMKKIRHEKLVQLYAV---VSEEPIYIVTEYMSKG 97
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 98 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 154
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 213
Query: 198 YPYSECKNPAQIFKKVTSGIK-------PASLAKV------NDPQIKGFIEKCLVPASER 244
PY N ++ +V G + P SL + DP+ + P E
Sbjct: 214 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEER--------PTFEY 264
Query: 245 LSAKDLLKDPFLQVENQKEP 264
L A L+D F E Q +P
Sbjct: 265 LQA--FLEDYFTSTEPQYQP 282
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 101
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLAS 109
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 158
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 110 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 166
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 205
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NV 97
P +++ E +++ S+ + +V + + TV +I +L G L Y ++HK N+
Sbjct: 62 PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNI 118
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQ 155
+ + NW QI G+ YL ++HRDL N+ V VKI D G A + ++
Sbjct: 119 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEE 175
Query: 156 PTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++MA E + Y D++S+G+ + E++TF
Sbjct: 176 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 219
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM--QQPTARSVIGTPEFMAPELYE 174
H H+ II+RDLK +NI ++ G +K+ D GL+ + A S GT E+MAPE+
Sbjct: 141 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 175 EE-YNELVDIYSFGMCILEMVTFEYPY 200
+ + D +SFG+ + EM+T P+
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 101
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 112
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 158
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 113 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 169
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 205
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 38 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 97
L G + +E+ +L+ +K +N+V + + + ++ +L + G L +
Sbjct: 60 LKGKESSIENEIAVLRKIKHENIVALED--IYESPNHLYLVMQLVSGGELFDRIVEKGFY 117
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNI--FVNGNHGEVKIGDLGLA-IAMQ 154
K RQ+L + YLH I+HRDLK +N+ + ++ I D GL+ + +
Sbjct: 118 TEKDASTLIRQVLDAVYYLHRMG--IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK 175
Query: 155 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
+ GTP ++APE L ++ Y++ VD +S G+ I ++ YP +N +++F+++
Sbjct: 176 GDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDSKLFEQI 234
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 101
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLAS 492
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 158
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 493 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 549
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 205
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKV 101
+K SE ++K+L ++VK + +++ T +I EL+ G L Y +++KN + +
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLT 114
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTAR 159
+ ++ QI + YL S N +HRD+ NI V VK+GD GL+ I +
Sbjct: 115 LVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKA 171
Query: 160 SVIGTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
SV P ++M+PE + + D++ F +C+ E+++F
Sbjct: 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSF 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 116/260 (44%), Gaps = 43/260 (16%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++TE + G
Sbjct: 43 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKG 97
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 98 CLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 154
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 213
Query: 198 YPYSECKNPAQIFKKVTSGIK-------PASLAKV------NDPQIKGFIEKCLVPASER 244
PY N ++ +V G + P SL + DP+ + P E
Sbjct: 214 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEER--------PTFEY 264
Query: 245 LSAKDLLKDPFLQVENQKEP 264
L A L+D F E Q +P
Sbjct: 265 LQA--FLEDYFTSTEPQYQP 282
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKV 101
+K SE ++K+L ++VK + +++ T +I EL+ G L Y +++KN + +
Sbjct: 54 EKFMSEAVIMKNLDHPHIVKLIG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLT 110
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTAR 159
+ ++ QI + YL S N +HRD+ NI V VK+GD GL+ I +
Sbjct: 111 LVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKA 167
Query: 160 SVIGTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
SV P ++M+PE + + D++ F +C+ E+++F
Sbjct: 168 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSF 206
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 31/206 (15%)
Query: 33 DDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRK 92
D L D Q+ E LL +L+ +++VKFY D + M+ E G+L ++ +
Sbjct: 55 DPTLAARKDFQR---EAELLTNLQHEHIVKFYGVCGDG--DPLIMVFEYMKHGDLNKFLR 109
Query: 93 KH----------------KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN 136
H + + + + A QI G+VYL S + +HRDL N V
Sbjct: 110 AHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVG 167
Query: 137 GNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPE-LYEEEYNELVDIYSFGMCIL 191
N VKIGD G++ + V G +M PE + ++ D++SFG+ +
Sbjct: 168 ANL-LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILW 226
Query: 192 EMVTF-EYPYSECKNPAQIFKKVTSG 216
E+ T+ + P+ + N ++ + +T G
Sbjct: 227 EIFTYGKQPWFQLSN-TEVIECITQG 251
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 32/184 (17%)
Query: 80 ELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNH 139
ELFT + R+ +H+ ++ + +I+ L H H II+RD+K +NI ++ N
Sbjct: 145 ELFTHLSQRERFTEHE------VQIYVGEIV--LALEHLHKLGIIYRDIKLENILLDSN- 195
Query: 140 GEVKIGDLGLA---IAMQQPTARSVIGTPEFMAPELY---EEEYNELVDIYSFGMCILEM 193
G V + D GL+ +A + A GT E+MAP++ + +++ VD +S G+ + E+
Sbjct: 196 GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYEL 255
Query: 194 VTFEYPYS---ECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVPASERLSAKDL 250
+T P++ E + A+I +++ P PQ + K L+ +RL L
Sbjct: 256 LTGASPFTVDGEKNSQAEISRRILKSEPPY-------PQEMSALAKDLI---QRL----L 301
Query: 251 LKDP 254
+KDP
Sbjct: 302 MKDP 305
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 111 HGLVYLHSH-NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM---QQPTARSVIGTPE 166
GL YLH H +P IIHRD+K NI ++ E +GD GLA M +V G
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIG 200
Query: 167 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 200
+APE L + +E D++ +G+ +LE++T + +
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 39/241 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK---- 95
DL L SE+ ++K + K N++ + D V I E + GNLR+Y + +
Sbjct: 117 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGL 174
Query: 96 ------------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+ K + + A Q+ G+ YL S IHRDL N+ V ++ +K
Sbjct: 175 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMK 231
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF- 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 232 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290
Query: 197 --EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLK 252
YP + ++ K+ KP++ ++ + C VP S+R + K L++
Sbjct: 291 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 345
Query: 253 D 253
D
Sbjct: 346 D 346
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 17/257 (6%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK--- 72
AFD GI VA K+ Q ++ Y E+ LLK + N++ + K
Sbjct: 43 AFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEE 100
Query: 73 -KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
+ V ++ EL NL Q H +D + + Q+L G+ +LHS IIHRDLK
Sbjct: 101 FQDVYLVMELM-DANLCQV--IHMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPS 155
Query: 132 NIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMC 189
NI V + +KI D GLA A + T + APE + Y VDI+S G
Sbjct: 156 NIVVKSD-CTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCI 214
Query: 190 ILEMVTFEYPYSECKNPAQIFKKVTS-GIKPASLAKVNDPQIKGFIEKCLVPASERLSAK 248
+ E+V + + Q K + G A P ++ ++E P + +
Sbjct: 215 MGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVEN--RPKYPGIKFE 272
Query: 249 DLLKDPFLQVENQKEPI 265
+L D E++++ I
Sbjct: 273 ELFPDWIFPSESERDKI 289
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 29/179 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
DL L SE+ ++K + K N++ + D V I E + GNLR+Y + + +
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGL 133
Query: 100 KVIKN----------------WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+ N A Q+ G+ YL S IHRDL N+ V ++ +K
Sbjct: 134 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMK 190
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK---- 95
DL L SE+ ++K + K N++ + D V I E + GNLR+Y + +
Sbjct: 65 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGL 122
Query: 96 ------------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+ K + + A Q+ G+ YL S IHRDL N+ V ++ +K
Sbjct: 123 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMK 179
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 180 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 237
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 44/222 (19%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD-NVVKFY------KS 66
Y+A D +G E A R+ ++ + +Q EV +K L N+V+F K
Sbjct: 45 YEAQDVGSGREYALKRLLSNEEEKNRAIIQ----EVCFMKKLSGHPNIVQFCSAASIGKE 100
Query: 67 WVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHGLVYLHSH 119
D + ++TEL G L ++ KK + + +K+ R + H +H
Sbjct: 101 ESDTGQAEFLLLTEL-CKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH----MHRQ 155
Query: 120 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-------PTARSVI-------GTP 165
PPIIHRDLK +N+ ++ N G +K+ D G A + R+++ TP
Sbjct: 156 KPPIIHRDLKVENLLLS-NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTP 214
Query: 166 EFMAPELYEEEYN----ELVDIYSFGMCILEMVTF-EYPYSE 202
+ PE+ + N E DI++ G CIL ++ F ++P+ +
Sbjct: 215 MYRTPEIIDLYSNFPIGEKQDIWALG-CILYLLCFRQHPFED 255
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK---- 95
DL L SE+ ++K + K N++ + D V I E + GNLR+Y + +
Sbjct: 68 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGL 125
Query: 96 ------------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+ K + + A Q+ G+ YL S IHRDL N+ V ++ +K
Sbjct: 126 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMK 182
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 183 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 240
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + +N++ ++ ++ K V ++T L + + + +H + D
Sbjct: 86 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSND- 144
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----Q 154
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA
Sbjct: 145 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT-XDLKICDFGLARVADPDHDH 200
Query: 155 QPTARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ T + APE L + Y + +DI+S G + EM++
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 41 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVD 98
++++ E ++K +K N+V+ V + ++TE GNL Y ++ + V
Sbjct: 71 EVEEFLKEAAVMKEIKHPNLVQLLG--VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVT 128
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
V+ A QI + YL N IHRDL N V NH VK+ D GL+ M T
Sbjct: 129 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-VVKVADFGLSRLMTGDTY 185
Query: 159 RSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
+ G ++ APE L ++ D+++FG+ + E+ T+
Sbjct: 186 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATY 227
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK---- 95
DL L SE+ ++K + K N++ + D V I E + GNLR+Y + +
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGL 133
Query: 96 ------------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+ K + + A Q+ G+ YL S IHRDL N+ V ++ +K
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMK 190
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK---- 95
DL L SE+ ++K + K N++ + D V I E + GNLR+Y + +
Sbjct: 69 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGL 126
Query: 96 ------------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+ K + + A Q+ G+ YL S IHRDL N+ V ++ +K
Sbjct: 127 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMK 183
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 184 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 241
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 45/252 (17%)
Query: 44 KLYSEVHLLKSLK-DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+++ EV L + + N+++ + + DD + ++ E G++ + +K K+ + +
Sbjct: 56 RVFREVETLYQCQGNKNILELIEFFEDDTR--FYLVFEKLQGGSILAHIQKQKHFNEREA 113
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNH--GEVKIGDLGLAIAMQ------ 154
R + L +LH+ I HRDLK +NI VKI D L M+
Sbjct: 114 SRVVRDVAAALDFLHTKG--IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCT 171
Query: 155 ---QPTARSVIGTPEFMAPELYE------EEYNELVDIYSFGMCILEMVTFEYPY----- 200
P + G+ E+MAPE+ E Y++ D++S G+ + M++ P+
Sbjct: 172 PITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCG 231
Query: 201 -----------SECKNPAQIFKKVTSG---IKPASLAKVNDPQIKGFIEKCLVP-ASERL 245
C+N ++F+ + G A ++ + K I K LV A +RL
Sbjct: 232 ADCGWDRGEVCRVCQN--KLFESIQEGKYEFPDKDWAHISS-EAKDLISKLLVRDAKQRL 288
Query: 246 SAKDLLKDPFLQ 257
SA +L+ P++Q
Sbjct: 289 SAAQVLQHPWVQ 300
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 29/179 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
DL L SE+ ++K + K N++ + D V I E + GNLR+Y + + +
Sbjct: 61 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGL 118
Query: 100 KVIKN----------------WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+ N A Q+ G+ YL S IHRDL N+ V ++ +K
Sbjct: 119 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMK 175
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 176 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 233
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 43/260 (16%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++ E + G
Sbjct: 43 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVIEYMSKG 97
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 98 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 154
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 155 VADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 213
Query: 198 YPYSECKNPAQIFKKVTSGIK-------PASLAKV------NDPQIKGFIEKCLVPASER 244
PY N ++ +V G + P SL + DP+ + P E
Sbjct: 214 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEER--------PTFEY 264
Query: 245 LSAKDLLKDPFLQVENQKEP 264
L A L+D F E Q +P
Sbjct: 265 LQA--FLEDYFTSTEPQYQP 282
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 27/170 (15%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+E++ L+ +N++ F + D+K + ++++ G+L Y ++ V ++ +
Sbjct: 85 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGM 141
Query: 103 KNWARQILHGLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
A GL +LH P I HRDLK NI V N G I DLGLA+
Sbjct: 142 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSA 200
Query: 157 T------ARSVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 193
T +GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 201 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 27/170 (15%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+E++ L+ +N++ F + D+K + ++++ G+L Y ++ V ++ +
Sbjct: 72 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGM 128
Query: 103 KNWARQILHGLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
A GL +LH P I HRDLK NI V N G I DLGLA+
Sbjct: 129 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSA 187
Query: 157 T------ARSVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 193
T +GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 188 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++TE G
Sbjct: 40 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMNKG 94
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + + QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 95 SLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 151
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 152 VADFGLARLIEDNEWTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTT 207
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + + +N++ ++ ++ K V ++ +L + + + +H + D
Sbjct: 68 QRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND- 126
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----Q 154
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA
Sbjct: 127 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT-SDLKICDFGLARVADPDHDH 182
Query: 155 QPTARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ T + APE L + Y + +DI+S G + EM++
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 27/252 (10%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++ E + G
Sbjct: 209 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP---IYIVGEYMSKG 263
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 320
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 321 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 379
Query: 198 YPYSECKNPAQIFKKVTSGIK----PASLAKVNDPQIKGFI-EKCLVPASERLSAKDLLK 252
PY N ++ +V G + P ++D + + E P E L A L+
Sbjct: 380 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA--FLE 436
Query: 253 DPFLQVENQKEP 264
D F E Q +P
Sbjct: 437 DYFTSTEPQXQP 448
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 43/260 (16%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++ E + G
Sbjct: 43 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVCEYMSKG 97
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 98 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 154
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 213
Query: 198 YPYSECKNPAQIFKKVTSGIK-------PASLAKV------NDPQIKGFIEKCLVPASER 244
PY N ++ +V G + P SL + DP+ + P E
Sbjct: 214 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEER--------PTFEY 264
Query: 245 LSAKDLLKDPFLQVENQKEP 264
L A L+D F E Q +P
Sbjct: 265 LQA--FLEDYFTSTEPQYQP 282
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGM 152
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GLA ++ T R
Sbjct: 153 LRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 268
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 12 SSYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKL-YSEVHLLKSLKDDNVVKFYKSWVDD 70
+ YKA D+ VA ++K+ + + + E+ LL+ L N++ ++
Sbjct: 25 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF--G 82
Query: 71 KKKTVNMITELFTSGNLRQYRKKHKNVDIKV-IKNWARQILHGLVYLHSHNPPIIHRDLK 129
K ++++ + F +L K + V IK + L GL YLH H I+HRDLK
Sbjct: 83 HKSNISLVFD-FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLK 139
Query: 130 CDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV--IGTPEFMAPELY--EEEYNELVDIYS 185
+N+ ++ N G +K+ D GLA + P + T + APEL Y VD+++
Sbjct: 140 PNNLLLDEN-GVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWA 198
Query: 186 FGMCILEMVTFEYPY 200
G CIL + P+
Sbjct: 199 VG-CILAELLLRVPF 212
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA----MQQPTARSV 161
A+ +G+ +LH ++ IHRD+K NI ++ KI D GLA A Q +
Sbjct: 130 AQGAANGINFLHENHH--IHRDIKSANILLDEAF-TAKISDFGLARASEKFAQXVXXSRI 186
Query: 162 IGTPEFMAPELYEEEYNELVDIYSFGMCILEMVT 195
+GT + APE E DIYSFG+ +LE++T
Sbjct: 187 VGTTAYXAPEALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 75 VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
VN+ EL G+L Q K+ + + Q L GL YLH+ I+H D+K DN+
Sbjct: 125 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVL 182
Query: 135 VNGNHGEVKIGDLGLAIAMQQP-------TARSVIGTPEFMAPE-LYEEEYNELVDIYSF 186
++ + + D G A+ +Q T + GT MAPE + + + VDI+S
Sbjct: 183 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 242
Query: 187 GMCILEMVTFEYPYSE 202
+L M+ +P+++
Sbjct: 243 CCMMLHMLNGCHPWTQ 258
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA-MQQPTARS--VIGTPEFMAPELYEE 175
H +HRD+K DNI ++ N G +++ D G + M+ T +S +GTP++++PE+ +
Sbjct: 192 HQLHYVHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 176 ------EYNELVDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVN 226
Y D +S G+C+ EM+ E P+ S + +I P + V+
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVS 310
Query: 227 DPQIKGFIEKCLVPASERLSA---KDLLKDPFL 256
+ K I + + RL +D K PF
Sbjct: 311 E-NAKDLIRRLICSREHRLGQNGIEDFKKHPFF 342
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++TE G
Sbjct: 40 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMNKG 94
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + + QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 95 SLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 151
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 152 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTT 207
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK---- 95
DL L SE+ ++K + K N++ + D V I E + GNLR+Y + +
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLQAREPPGL 133
Query: 96 ------------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+ K + + A Q+ G+ YL S IHRDL N+ V ++ +K
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMK 190
Query: 144 IGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
I D GLA I + T + ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 43/260 (16%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++ E + G
Sbjct: 43 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVIEYMSKG 97
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 98 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 154
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 213
Query: 198 YPYSECKNPAQIFKKVTSGIK-------PASLAKV------NDPQIKGFIEKCLVPASER 244
PY N ++ +V G + P SL + DP+ + P E
Sbjct: 214 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEER--------PTFEY 264
Query: 245 LSAKDLLKDPFLQVENQKEP 264
L A L+D F E Q +P
Sbjct: 265 LQA--FLEDYFTSTEPQYQP 282
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 15 KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKK 73
KA+D +E W +KI + L + EV LL+ + K D +K+Y +
Sbjct: 53 KAYDR---VEQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 107
Query: 74 TVNMITELFTSGNLRQY----RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
N + +F + Y + V + + + +A+Q+ L++L + IIH DLK
Sbjct: 108 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 167
Query: 130 CDNIFV-NGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFG 187
+NI + N +KI D G + + Q + I + + +PE L Y+ +D++S G
Sbjct: 168 PENILLCNPKRSAIKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLGMPYDLAIDMWSLG 226
Query: 188 MCILEMVTFEYPYSECKNPAQIFKKV-TSGIKPASLAKVNDPQIKGFIEK 236
++EM T E +S Q+ K V GI PA + P+ + F EK
Sbjct: 227 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKFFEK 275
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 15 KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKK 73
KA+D +E W +KI + L + EV LL+ + K D +K+Y +
Sbjct: 72 KAYDR---VEQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126
Query: 74 TVNMITELFTSGNLRQY----RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
N + +F + Y + V + + + +A+Q+ L++L + IIH DLK
Sbjct: 127 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 186
Query: 130 CDNIFV-NGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFG 187
+NI + N +KI D G + + Q + I + + +PE L Y+ +D++S G
Sbjct: 187 PENILLCNPKRSAIKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLGMPYDLAIDMWSLG 245
Query: 188 MCILEMVTFEYPYSECKNPAQIFKKV-TSGIKPASLAKVNDPQIKGFIEK 236
++EM T E +S Q+ K V GI PA + P+ + F EK
Sbjct: 246 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKFFEK 294
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 75 VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
VN+ EL G+L Q K+ + + Q L GL YLH+ I+H D+K DN+
Sbjct: 139 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVL 196
Query: 135 VNGNHGEVKIGDLGLAIAMQQP-------TARSVIGTPEFMAPE-LYEEEYNELVDIYSF 186
++ + + D G A+ +Q T + GT MAPE + + + VDI+S
Sbjct: 197 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 256
Query: 187 GMCILEMVTFEYPYSE 202
+L M+ +P+++
Sbjct: 257 CCMMLHMLNGCHPWTQ 272
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 27/170 (15%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+E++ L+ +N++ F + D+K + ++++ G+L Y ++ V ++ +
Sbjct: 47 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGM 103
Query: 103 KNWARQILHGLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
A GL +LH P I HRDLK NI V N G I DLGLA+
Sbjct: 104 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSA 162
Query: 157 T------ARSVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 193
T +GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 163 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 75 VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
VN+ EL G+L Q K+ + + Q L GL YLH+ I+H D+K DN+
Sbjct: 141 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVL 198
Query: 135 VNGNHGEVKIGDLGLAIAMQQP-------TARSVIGTPEFMAPE-LYEEEYNELVDIYSF 186
++ + + D G A+ +Q T + GT MAPE + + + VDI+S
Sbjct: 199 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 258
Query: 187 GMCILEMVTFEYPYSE 202
+L M+ +P+++
Sbjct: 259 CCMMLHMLNGCHPWTQ 274
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + + +N++ ++ ++ K V ++ +L + + + +H + D
Sbjct: 68 QRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND- 126
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR 159
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA
Sbjct: 127 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDH 182
Query: 160 S-----VIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ + T + APE L + Y + +DI+S G + EM++
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 27/170 (15%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+E++ L+ +N++ F + D+K + ++++ G+L Y ++ V ++ +
Sbjct: 52 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGM 108
Query: 103 KNWARQILHGLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
A GL +LH P I HRDLK NI V N G I DLGLA+
Sbjct: 109 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSA 167
Query: 157 T------ARSVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 193
T +GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 168 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPE-LY 173
H H II+RDLK +NI +N + G VK+ D GL + GT E+MAPE L
Sbjct: 136 HLHQKGIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 174 EEEYNELVDIYSFGMCILEMVTFEYPYS 201
+N VD +S G + +M+T P++
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 27/170 (15%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+E++ L+ +N++ F + D+K + ++++ G+L Y ++ V ++ +
Sbjct: 49 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGM 105
Query: 103 KNWARQILHGLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
A GL +LH P I HRDLK NI V N G I DLGLA+
Sbjct: 106 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSA 164
Query: 157 T------ARSVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 193
T +GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 165 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 82 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 138
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 139 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 196
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 197 KLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 60 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR----QILHGLVY 115
VV+ + ++ DD+ + M+ E G+L + V + WAR +++ L
Sbjct: 131 VVQLFYAFQDDR--YLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDA 183
Query: 116 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP---TARSVIGTPEFMAPEL 172
+HS IHRD+K DN+ ++ + G +K+ D G + M + + +GTP++++PE+
Sbjct: 184 IHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 240
Query: 173 YEEE-----YNELVDIYSFGMCILEMVTFEYPY 200
+ + Y D +S G+ + EM+ + P+
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 86 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 142
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 143 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 200
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 201 KLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 84 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 140
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 141 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 198
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 199 KLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNW 105
SE ++ NV+ V K V +ITE +G+L + R+ + +
Sbjct: 83 SEASIMGQFDHPNVIHL--EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 140
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ----QPTARSV 161
R I G+ YL N +HRDL NI VN N K+ D GL+ ++ PT S
Sbjct: 141 LRGIAAGMKYLADMN--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 162 IGTP---EFMAPELYE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKN 205
+G + APE + ++ D++S+G+ + E++++ E PY + N
Sbjct: 198 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 60 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR----QILHGLVY 115
VV+ + ++ DD+ + M+ E G+L + V + WAR +++ L
Sbjct: 136 VVQLFYAFQDDR--YLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDA 188
Query: 116 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP---TARSVIGTPEFMAPEL 172
+HS IHRD+K DN+ ++ + G +K+ D G + M + + +GTP++++PE+
Sbjct: 189 IHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 173 YEEE-----YNELVDIYSFGMCILEMVTFEYPY 200
+ + Y D +S G+ + EM+ + P+
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEE 175
H H+ ++HRD+K +NI ++ G K+ D G + GT + PE +
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRH 213
Query: 176 EYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 234
+Y+ L ++S G+ + +MV + P+ + + + + P A I
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCA---------LI 264
Query: 235 EKCLVP-ASERLSAKDLLKDPFLQVENQKEPI 265
+CL P S R S +++L DP++Q + P+
Sbjct: 265 RRCLAPKPSSRPSLEEILLDPWMQTPAEDVPL 296
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 27/170 (15%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVI 102
+E++ L+ +N++ F + D+K + ++++ G+L Y ++ V ++ +
Sbjct: 46 AEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGM 102
Query: 103 KNWARQILHGLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 156
A GL +LH P I HRDLK NI V N G I DLGLA+
Sbjct: 103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSA 161
Query: 157 T------ARSVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 193
T +GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 82 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 138
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 139 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 196
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 197 KLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 76 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 132
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 133 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 190
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 191 KLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 60 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR----QILHGLVY 115
VV+ + ++ DD+ + M+ E G+L + V + WAR +++ L
Sbjct: 136 VVQLFYAFQDDR--YLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDA 188
Query: 116 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP---TARSVIGTPEFMAPEL 172
+HS IHRD+K DN+ ++ + G +K+ D G + M + + +GTP++++PE+
Sbjct: 189 IHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 173 YEEE-----YNELVDIYSFGMCILEMVTFEYPY 200
+ + Y D +S G+ + EM+ + P+
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 15 KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKK 73
KA+D +E W +KI + L + EV LL+ + K D +K+Y +
Sbjct: 72 KAYDR---VEQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126
Query: 74 TVNMITELFTSGNLRQY----RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
N + +F + Y + V + + + +A+Q+ L++L + IIH DLK
Sbjct: 127 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 186
Query: 130 CDNIFV-NGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFG 187
+NI + N +KI D G + + Q + I + + +PE L Y+ +D++S G
Sbjct: 187 PENILLCNPKRXAIKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLGMPYDLAIDMWSLG 245
Query: 188 MCILEMVTFEYPYSECKNPAQIFKKV-TSGIKPASLAKVNDPQIKGFIEK 236
++EM T E +S Q+ K V GI PA + P+ + F EK
Sbjct: 246 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKFFEK 294
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 10/225 (4%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
G +L E+ + L N+++ Y + D ++ + +I E G L + +K D
Sbjct: 65 GVEHQLRREIEIQAHLHHPNILRLYNYFYD--RRRIYLILEYAPRGELYKELQKSCTFDE 122
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR 159
+ ++ L+Y H +IHRD+K +N+ + GE+KI D G ++ +
Sbjct: 123 QRTATIMEELADALMYCHGKK--VIHRDIKPENLLLGLK-GELKIADFGWSVHAPSLRRK 179
Query: 160 SVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK 218
++ GT +++ PE+ E +NE VD++ G+ E++ P+ + + V +K
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLK 239
Query: 219 -PASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQK 262
PAS+ I + SERL + P+++ +++
Sbjct: 240 FPASVPTGAQDLISKLLRHN---PSERLPLAQVSAHPWVRANSRR 281
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARS--VIGTPEFMAPELYEE 175
H +HRD+K DN+ ++ N G +++ D G + M T +S +GTP++++PE+ +
Sbjct: 208 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 176 ------EYNELVDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVN 226
+Y D +S G+C+ EM+ E P+ S + +I P+ + V+
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVS 326
Query: 227 DPQIKGFIEKCLVPASERLSA---KDLLKDPFLQVENQKEPICDPLKLPIQSLKMLRLP- 282
+ + K I++ + RL +D K F + N + I++L+ +P
Sbjct: 327 E-EAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWEN---------IRNLEAPYIPD 376
Query: 283 MSGP---SSMDIDSD 294
+S P S+ D+D D
Sbjct: 377 VSSPSDTSNFDVDDD 391
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 127 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 183
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 184 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 241
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 242 KLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 96 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGM 152
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GL+ ++ T R
Sbjct: 153 LRGIASGMKYLSDMG--FVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 268
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKT-VNMITELFTSG 85
V I VLQ D + E+ +++ +K NVV F+ S D K + +N++ E
Sbjct: 67 VAIKKVLQ---DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPET 123
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y K + + + +IK + Q+L L Y+HS I HRD+K N+ ++ G +
Sbjct: 124 VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVL 181
Query: 143 KIGDLGLA-IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A I + S I + + APEL Y +DI+S G + E++
Sbjct: 182 KLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 46 AYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 103 KDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 158
Query: 133 IFVNGNHGEVKIGDLGLAIAM-----QQPTARSVIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + T + APE L + Y + +DI+S
Sbjct: 159 LLLNTT-CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 218 VGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 47 AYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 103
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 104 KDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 159
Query: 133 IFVNGNHGEVKIGDLGLAIAM-----QQPTARSVIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + T + APE L + Y + +DI+S
Sbjct: 160 LLLNTT-CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWS 218
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 219 VGCILAEMLS 228
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 96 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGM 152
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GL+ ++ T R
Sbjct: 153 LRGIASGMKYLSDMGA--VHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 268
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 46 AYDNLNKVRVAIRKIS---PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 103 KDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 158
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + + T + APE L + Y + +DI+S
Sbjct: 159 LLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 218 VGCILAEMLS 227
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 53 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 109
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 110 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 167
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 168 KLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 47 AYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 103
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 104 KDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 159
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + + T + APE L + Y + +DI+S
Sbjct: 160 LLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 218
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 219 VGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 48 AYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 104
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 105 KDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 160
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + + T + APE L + Y + +DI+S
Sbjct: 161 LLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 219
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 220 VGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 39 AYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 95
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 96 KDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 151
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + + T + APE L + Y + +DI+S
Sbjct: 152 LLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 210
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 211 VGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 46 AYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 103 KDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 158
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + + T + APE L + Y + +DI+S
Sbjct: 159 LLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 218 VGCILAEMLS 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 46 AYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 103 KDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 158
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + + T + APE L + Y + +DI+S
Sbjct: 159 LLLNTT-XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 218 VGCILAEMLS 227
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 84 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGM 140
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GL+ ++ T R
Sbjct: 141 LRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 256
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARS--VIGTPEFMAPELYEE 175
H +HRD+K DN+ ++ N G +++ D G + M T +S +GTP++++PE+ +
Sbjct: 192 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 176 ------EYNELVDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVN 226
+Y D +S G+C+ EM+ E P+ S + +I P+ + V+
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVS 310
Query: 227 DPQIKGFIEKCLVPASERLSA---KDLLKDPFLQVENQKEPICDPLKLPIQSLKMLRLP- 282
+ + K I++ + RL +D K F + N + I++L+ +P
Sbjct: 311 E-EAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWEN---------IRNLEAPYIPD 360
Query: 283 MSGP---SSMDIDSD 294
+S P S+ D+D D
Sbjct: 361 VSSPSDTSNFDVDDD 375
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 74 TVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
++ ++T+ G+L + ++H+ + +++ NW QI G+ YL H ++HR+L N
Sbjct: 106 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARN 163
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTP-EFMAPE-LYEEEYNELVDIYSF 186
+ + + +V++ D G+A + P + ++ TP ++MA E ++ +Y D++S+
Sbjct: 164 VLLK-SPSQVQVADFGVA-DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 221
Query: 187 GMCILEMVTF-EYPYSECK 204
G+ + E++TF PY+ +
Sbjct: 222 GVTVWELMTFGAEPYAGLR 240
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 40 AYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 96
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 97 KDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 152
Query: 133 IFVNGNHGEVKIGDLGLAIAM-----QQPTARSVIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + T + APE L + Y + +DI+S
Sbjct: 153 LLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 211
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 212 VGCILAEMLS 221
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 40 AYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 96
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 97 KDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 152
Query: 133 IFVNGNHGEVKIGDLGLAIAM-----QQPTARSVIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + T + APE L + Y + +DI+S
Sbjct: 153 LLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 211
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 212 VGCILAEMLS 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 60 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 116
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 117 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 174
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 175 KLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 60 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 116
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 117 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 174
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 175 KLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 67 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGM 123
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GL+ ++ T R
Sbjct: 124 LRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 239
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 115/260 (44%), Gaps = 43/260 (16%)
Query: 28 SRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG 85
+RV I + PG + + E ++K L+ + +V+ Y ++ + ++ E + G
Sbjct: 43 TRVAIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVMEYMSKG 97
Query: 86 NLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
L + K K + + + + A QI G+ Y+ N +HRDL+ NI V G + K
Sbjct: 98 CLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCK 154
Query: 144 IGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEEEYNELVDIYSFGMCILEMVT-FE 197
+ D GLA I + TAR P ++ APE LY + D++SFG+ + E+ T
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGR 213
Query: 198 YPYSECKNPAQIFKKVTSGIK-------PASLAKV------NDPQIKGFIEKCLVPASER 244
PY N ++ +V G + P SL + DP+ + P E
Sbjct: 214 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEER--------PTFEY 264
Query: 245 LSAKDLLKDPFLQVENQKEP 264
L A L+D F E Q +P
Sbjct: 265 LQA--FLEDYFTSTEPQYQP 282
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 46 AYDNLNKVRVAIKKIS---PFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 103 KDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 158
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + + T + APE L + Y + +DI+S
Sbjct: 159 LLLNTT-XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 218 VGCILAEMLS 227
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 56 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 112
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 113 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 170
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 171 KLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGM 152
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GL+ ++ T R
Sbjct: 153 LRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 268
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + +N++ ++ ++ K V ++ +L + + + +H + D
Sbjct: 74 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND- 132
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR 159
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA
Sbjct: 133 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDH 188
Query: 160 S-----VIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ + T + APE L + Y + +DI+S G + EM++
Sbjct: 189 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + +N++ ++ ++ K V ++ +L + + + +H + D
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND- 124
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR 159
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA
Sbjct: 125 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDH 180
Query: 160 S-----VIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ + T + APE L + Y + +DI+S G + EM++
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGM 152
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GL+ ++ T R
Sbjct: 153 LRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 268
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGM 152
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GL+ ++ T R
Sbjct: 153 LRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 268
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGM 152
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GL+ ++ T R
Sbjct: 153 LRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 268
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 96 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGM 152
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GL+ ++ T R
Sbjct: 153 LRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 268
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 48 EVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIK 100
E+ +++ L N+V+ FY S + +N++ + + R Y + + + +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI 122
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTA 158
+K + Q+ L Y+HS I HRD+K N+ ++ + +K+ D G A + +P
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 159 RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
S I + + APEL +Y +D++S G + E++
Sbjct: 181 -SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + +N++ ++ ++ K V ++ +L + + + +H + D
Sbjct: 86 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND- 144
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----Q 154
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA
Sbjct: 145 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDH 200
Query: 155 QPTARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ T + APE L + Y + +DI+S G + EM++
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + +N++ ++ ++ K V ++ +L + + + +H + D
Sbjct: 68 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND- 126
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR 159
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA
Sbjct: 127 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDH 182
Query: 160 S-----VIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ + T + APE L + Y + +DI+S G + EM++
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 61 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 117
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 118 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 175
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 176 KLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 67 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 123
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 124 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 181
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 182 KLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPE-LY 173
H H II+RDLK +NI +N + G VK+ D GL GT E+MAPE L
Sbjct: 136 HLHQKGIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 174 EEEYNELVDIYSFGMCILEMVTFEYPYS 201
+N VD +S G + +M+T P++
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 67 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGM 123
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GL+ ++ T R
Sbjct: 124 LRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 239
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 94 EASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGM 150
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL +HRDL NI +N N K+ D GL+ ++ T R
Sbjct: 151 LRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 266
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 74 TVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
++ ++T+ G+L + ++H+ + +++ NW QI G+ YL H ++HR+L N
Sbjct: 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARN 145
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTP-EFMAPE-LYEEEYNELVDIYSF 186
+ + + +V++ D G+A + P + ++ TP ++MA E ++ +Y D++S+
Sbjct: 146 VLLK-SPSQVQVADFGVA-DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 187 GMCILEMVTF-EYPYSECK 204
G+ + E++TF PY+ +
Sbjct: 204 GVTVWELMTFGAEPYAGLR 222
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 104
E ++ N+++ V K K V ++TE +G+L + +KH + VI+
Sbjct: 95 GEASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVG 151
Query: 105 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TAR 159
R I G+ YL +HRDL NI +N N K+ D GL ++ T R
Sbjct: 152 MLRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLGRVLEDDPEAAYTTR 208
Query: 160 SVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGI 217
+ +PE + ++ D++S+G+ + E++++ E PY E N + K V G
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 267
Query: 218 K 218
+
Sbjct: 268 R 268
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + +N++ ++ ++ K V ++ +L + + + +H + D
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND- 124
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR 159
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA
Sbjct: 125 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT-XDLKIXDFGLARVADPDHDH 180
Query: 160 S-----VIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ + T + APE L + Y + +DI+S G + EM++
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 52 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 108
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 109 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 166
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 167 KLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 48 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 162
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 163 KLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 48 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 162
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 163 KLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + +N++ ++ ++ K V ++ +L + + + +H + D
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND- 124
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----Q 154
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA
Sbjct: 125 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT-XDLKICDFGLARVADPDHDH 180
Query: 155 QPTARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ T + APE L + Y + +DI+S G + EM++
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + +N++ ++ ++ K V ++ +L + + + +H + D
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND- 124
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----Q 154
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA
Sbjct: 125 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDH 180
Query: 155 QPTARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ T + APE L + Y + +DI+S G + EM++
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + +N++ ++ ++ K V ++ +L + + + +H + D
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND- 124
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR 159
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA
Sbjct: 125 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTT-XDLKICDFGLARVADPDHDH 180
Query: 160 S-----VIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ + T + APE L + Y + +DI+S G + EM++
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 16 AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV---KFYKSWVDDKK 72
A+D + VA ++ + Q+ E+ +L + +N++ ++ ++
Sbjct: 46 AYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
K V ++ +L + + + +H + D I + QIL GL Y+HS N ++HRDLK N
Sbjct: 103 KDVYIVQDLMETDLYKLLKCQHLSND--HICYFLYQILRGLKYIHSAN--VLHRDLKPSN 158
Query: 133 IFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYEEEYNELVDIYS 185
+ +N ++KI D GLA + + T + APE L + Y + +DI+S
Sbjct: 159 LLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 186 FGMCILEMVT 195
G + EM++
Sbjct: 218 VGCILAEMLS 227
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 49 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 105
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 106 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 163
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 164 KLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 25/191 (13%)
Query: 45 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH---------- 94
+ E LL +L+ +++VKFY V+ + M+ E G+L ++ + H
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDP--LIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 95 ---KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAI 151
+ + + A+QI G+VYL S + +HRDL N V G + VKIGD G++
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLV-GENLLVKIGDFGMSR 176
Query: 152 AMQQPTARSVIGTP----EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKN 205
+ V G +M PE + ++ D++S G+ + E+ T+ + P+ + N
Sbjct: 177 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236
Query: 206 PAQIFKKVTSG 216
++ + +T G
Sbjct: 237 -NEVIECITQG 246
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S + +N++ +
Sbjct: 48 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 162
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 163 KLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 36/208 (17%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV- 97
P +L+ L SE ++LK + +V+K Y + D + +I E G+LR + ++ + V
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 98 ------------------DIKVIK-----NWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
D + + ++A QI G+ YL + ++HRDL NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNIL 182
Query: 135 VNGNHGEVKIGDLGLAIAMQQP---TARSVIGTP-EFMAPE-LYEEEYNELVDIYSFGMC 189
V ++KI D GL+ + + RS P ++MA E L++ Y D++SFG+
Sbjct: 183 VAEGR-KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 190 ILEMVTF-EYPYSECKNPAQIFKKVTSG 216
+ E+VT PY P ++F + +G
Sbjct: 242 LWEIVTLGGNPYPGIP-PERLFNLLKTG 268
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 107/236 (45%), Gaps = 26/236 (11%)
Query: 31 KIDDVLQLPGDLQKLYSEVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
+I D +LP ++ EV LLK + V++ W + V ++ + +L
Sbjct: 45 RISDWGELPNG-TRVPMEVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERMEPVQDLF 102
Query: 89 QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLG 148
+ + + ++ +++ Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G
Sbjct: 103 DFITERGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 160
Query: 149 LAIAMQQPTARSVIGTPEFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN- 205
++ GT + PE Y + ++S G+ + +MV + P+ +
Sbjct: 161 SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
Query: 206 -PAQIF--KKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 257
Q+F ++V+S + + I CL + S+R + +++ P++Q
Sbjct: 221 IRGQVFFRQRVSS-------------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 48 EVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIK 100
E+ +++ L N+V+ FY S + +N++ + R Y + + + +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTA 158
+K + Q+ L Y+HS I HRD+K N+ ++ + +K+ D G A + +P
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 159 RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
S I + + APEL +Y +D++S G + E++
Sbjct: 181 -SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 48 EVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIK 100
E+ +++ L N+V+ FY S + +N++ + R Y + + + +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTA 158
+K + Q+ L Y+HS I HRD+K N+ ++ + +K+ D G A + +P
Sbjct: 123 YVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 159 RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
S I + + APEL +Y +D++S G + E++
Sbjct: 181 -SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 36/208 (17%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P +L+ L SE ++LK + +V+K Y + D + +I E G+LR + ++ + V
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 99 IKVIK------------------------NWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
+ ++A QI G+ YL ++HRDL NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNIL 182
Query: 135 VNGNHGEVKIGDLGLAIAMQQP---TARSVIGTP-EFMAPE-LYEEEYNELVDIYSFGMC 189
V ++KI D GL+ + + RS P ++MA E L++ Y D++SFG+
Sbjct: 183 VAEGR-KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 190 ILEMVTF-EYPYSECKNPAQIFKKVTSG 216
+ E+VT PY P ++F + +G
Sbjct: 242 LWEIVTLGGNPYPGIP-PERLFNLLKTG 268
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 36/208 (17%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 98
P +L+ L SE ++LK + +V+K Y + D + +I E G+LR + ++ + V
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 99 IKVIK------------------------NWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
+ ++A QI G+ YL ++HRDL NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNIL 182
Query: 135 VNGNHGEVKIGDLGLAIAMQQP---TARSVIGTP-EFMAPE-LYEEEYNELVDIYSFGMC 189
V ++KI D GL+ + + RS P ++MA E L++ Y D++SFG+
Sbjct: 183 VAEGR-KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 190 ILEMVTF-EYPYSECKNPAQIFKKVTSG 216
+ E+VT PY P ++F + +G
Sbjct: 242 LWEIVTLGGNPYPGIP-PERLFNLLKTG 268
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 50/210 (23%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNM--------------------- 77
P D++++ +EV L+K L N+ + Y+ + D++ + M
Sbjct: 69 PKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTG 128
Query: 78 ----------------ITELFTSGNLRQYRKKHKNVDI-KVIKNWARQILHGLVYLHSHN 120
E +G++ +R+ V K+I N RQI L YLH N
Sbjct: 129 KCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH--N 186
Query: 121 PPIIHRDLKCDNIFVNGNHG-EVKIGDLGLAIAMQQPT------ARSVIGTPEFMAPELY 173
I HRD+K +N + N E+K+ D GL+ + + GTP F+APE+
Sbjct: 187 QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246
Query: 174 ---EEEYNELVDIYSFGMCILEMVTFEYPY 200
E Y D +S G+ + ++ P+
Sbjct: 247 NTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 64/274 (23%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKV-----I 102
E+ +LK K +N++ + D + N E++ L Q H+ + ++ I
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFN---EVYIIQELMQ-TDLHRVISTQMLSDDHI 114
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM--------- 153
+ + Q L + LH N +IHRDLK N+ +N N ++K+ D GLA +
Sbjct: 115 QYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSE 171
Query: 154 ---QQPTARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQ 208
QQ + T + APE L +Y+ +D++S G CIL + P ++
Sbjct: 172 PTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRH 230
Query: 209 ----IFKKVTSGIKPASLAKVNDPQIKGFIEKC-LVPA---------------------- 241
IF + + L + P+ + +I+ + PA
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRML 290
Query: 242 ----SERLSAKDLLKDPFLQV------ENQKEPI 265
++R++AK+ L+ P+LQ E + EPI
Sbjct: 291 VFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPI 324
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKTVNMITELFTSG 85
V I VLQ D + E+ +++ L N+V+ FY S +N++ +
Sbjct: 48 VAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPET 104
Query: 86 NLR---QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEV 142
R Y + + + + +K + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 162
Query: 143 KIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 194
K+ D G A + +P S I + + APEL +Y +D++S G + E++
Sbjct: 163 KLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 64/274 (23%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKV-----I 102
E+ +LK K +N++ + D + N E++ L Q H+ + ++ I
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFN---EVYIIQELMQ-TDLHRVISTQMLSDDHI 114
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM--------- 153
+ + Q L + LH N +IHRDLK N+ +N N ++K+ D GLA +
Sbjct: 115 QYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSE 171
Query: 154 ---QQPTARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQ 208
QQ + T + APE L +Y+ +D++S G CIL + P ++
Sbjct: 172 PTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRH 230
Query: 209 ----IFKKVTSGIKPASLAKVNDPQIKGFIEKC-LVPA---------------------- 241
IF + + L + P+ + +I+ + PA
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRML 290
Query: 242 ----SERLSAKDLLKDPFLQV------ENQKEPI 265
++R++AK+ L+ P+LQ E + EPI
Sbjct: 291 VFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPI 324
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 54/255 (21%)
Query: 41 DLQKLYSEVHLLKS--LKDDNVVKFYKSWVDDKKKTVNMITELFT------SGNLRQYRK 92
D Q SE + + +K +N+++F + +K+ N+ EL+ G+L Y K
Sbjct: 50 DKQSWQSEREIFSTPGMKHENLLQF----IAAEKRGSNLEVELWLITAFHDKGSLTDYLK 105
Query: 93 KHKNVDIKVIKNWARQILHGLVYLH---------SHNPPIIHRDLKCDNIFVNGNHGEVK 143
+ + + + A + GL YLH H P I HRD K N+ + + V
Sbjct: 106 GNI-ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV- 163
Query: 144 IGDLGLAIAMQ--QPTA--RSVIGTPEFMAPELYEEEYN------ELVDIYSFGMCILEM 193
+ D GLA+ + +P +GT +MAPE+ E N +D+Y+ G+ + E+
Sbjct: 164 LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 223
Query: 194 VT---------------FE-----YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGF 233
V+ FE +P E + KK+ IK L Q+
Sbjct: 224 VSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVT 283
Query: 234 IEKCL-VPASERLSA 247
IE+C A RLSA
Sbjct: 284 IEECWDHDAEARLSA 298
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 64/274 (23%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKV-----I 102
E+ +LK K +N++ + D + N E++ L Q H+ + ++ I
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFN---EVYIIQELMQ-TDLHRVISTQMLSDDHI 114
Query: 103 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM--------- 153
+ + Q L + LH N +IHRDLK N+ +N N ++K+ D GLA +
Sbjct: 115 QYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSE 171
Query: 154 ---QQPTARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQ 208
QQ + T + APE L +Y+ +D++S G CIL + P ++
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRH 230
Query: 209 ----IFKKVTSGIKPASLAKVNDPQIKGFIEKC-LVPA---------------------- 241
IF + + L + P+ + +I+ + PA
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRML 290
Query: 242 ----SERLSAKDLLKDPFLQV------ENQKEPI 265
++R++AK+ L+ P+LQ E + EPI
Sbjct: 291 VFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPI 324
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 43 QKLYSEVHLLKSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 99
Q+ E+ +L + +NV+ ++ + + V ++ +L + + + + + D
Sbjct: 86 QRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSND- 144
Query: 100 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-- 157
I + QIL GL Y+HS N ++HRDLK N+ +N ++KI D GLA + P
Sbjct: 145 -HICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLINTT-CDLKICDFGLA-RIADPEHD 199
Query: 158 ----ARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ T + APE L + Y + +DI+S G + EM++
Sbjct: 200 HTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 74 TVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 132
TV ++T+L G L + R+ + + + NW QI G+ YL ++HRDL N
Sbjct: 92 TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR--LVHRDLAARN 149
Query: 133 IFVNG-NHGEVKIGDLGLA----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSF 186
+ V NH VKI D GLA I + A ++MA E + + D++S+
Sbjct: 150 VLVKSPNH--VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSY 207
Query: 187 GMCILEMVTF 196
G+ + E++TF
Sbjct: 208 GVTVWELMTF 217
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQI 230
+ ++S G+ + +MV + P+ + Q+F ++V+S +
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 231
Query: 231 KGFIEKCL-VPASERLSAKDLLKDPFLQ 257
+ I CL + S+R + +++ P++Q
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 188
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQI 230
+ ++S G+ + +MV + P+ + Q+F ++V+S +
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 235
Query: 231 KGFIEKCL-VPASERLSAKDLLKDPFLQ 257
+ I CL + S+R + +++ P++Q
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQI 230
+ ++S G+ + +MV + P+ + Q+F ++V+S +
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS-------------EC 231
Query: 231 KGFIEKCL-VPASERLSAKDLLKDPFLQ 257
+ I CL + S+R + +++ P++Q
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQI 230
+ ++S G+ + +MV + P+ + Q+F ++V+S +
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 236
Query: 231 KGFIEKCL-VPASERLSAKDLLKDPFLQ 257
+ I CL + S+R + +++ P++Q
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 187
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQI 230
+ ++S G+ + +MV + P+ + Q+F ++V+S +
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 234
Query: 231 KGFIEKCL-VPASERLSAKDLLKDPFLQ 257
+ I CL + S+R + +++ P++Q
Sbjct: 235 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 77 MITELFTSGNLRQYRKKH-KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV 135
++ E + G+L K + + ++ + + +I+ + +H +HRD+K DNI +
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG--YVHRDIKPDNILL 195
Query: 136 NGNHGEVKIGDLGLAIAMQQ-PTARSV--IGTPEFMAPELYEEEYNEL--------VDIY 184
+ G +++ D G + ++ T RS+ +GTP++++PE+ + D +
Sbjct: 196 D-RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWW 254
Query: 185 SFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVND---PQIKGFIEKCLVPA 241
+ G+ EM + P+ + A+ + K+ + SL V++ + + FI++ L P
Sbjct: 255 ALGVFAYEMFYGQTPFY-ADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPP 313
Query: 242 SERL---SAKDLLKDPFL 256
RL A D PF
Sbjct: 314 ETRLGRGGAGDFRTHPFF 331
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQI 230
+ ++S G+ + +MV + P+ + Q+F ++V+S +
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 236
Query: 231 KGFIEKCL-VPASERLSAKDLLKDPFLQ 257
+ I CL + S+R + +++ P++Q
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNW 105
SE ++ NV+ V K V +ITE +G+L + R+ + +
Sbjct: 57 SEASIMGQFDHPNVIHL--EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 114
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ----QPTARSV 161
R I G+ YL N +HR L NI VN N K+ D GL+ ++ PT S
Sbjct: 115 LRGIAAGMKYLADMN--YVHRALAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 162 IGTP---EFMAPELYE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKN 205
+G + APE + ++ D++S+G+ + E++++ E PY + N
Sbjct: 172 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 220
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQI 230
+ ++S G+ + +MV + P+ + Q+F ++V+S +
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 236
Query: 231 KGFIEKCL-VPASERLSAKDLLKDPFLQ 257
+ I CL + S+R + +++ P++Q
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 118 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARSVIGTPEFMAPEL 172
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANILISATNA-VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 173 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 201
+ + D+YS G + E++T E P++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 203
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 118 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-----PTARSVIGTPEFMAPEL 172
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 173 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 201
+ + D+YS G + E++T E P++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 28/216 (12%)
Query: 24 EVAWSRVKIDDVLQLPGDLQKL------------YSEVHLLKSLKDDNVVKFYKSWVDDK 71
EV R+K+ +LP ++ L E ++ N++ V K
Sbjct: 37 EVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL--EGVVTK 94
Query: 72 KKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHNPPIIHRDLK 129
K V ++TE +G+L + KK+ VI+ R I G+ YL +HRDL
Sbjct: 95 SKPVMIVTEYMENGSLDTFLKKNDG-QFTVIQLVGMLRGISAGMKYLSDMG--YVHRDLA 151
Query: 130 CDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARSVIGTPEFMAPE-LYEEEYNELVDI 183
NI +N N K+ D GL+ ++ T R + APE + ++ D+
Sbjct: 152 ARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDV 210
Query: 184 YSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+S+G+ + E+V++ E PY E N + K V G +
Sbjct: 211 WSYGIVMWEVVSYGERPYWEMTN-QDVIKAVEEGYR 245
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 118 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-----PTARSVIGTPEFMAPEL 172
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 173 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 201
+ + D+YS G + E++T E P++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQI 230
+ ++S G+ + +MV + P+ + Q+F ++V+S +
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 251
Query: 231 KGFIEKCL-VPASERLSAKDLLKDPFLQ 257
+ I CL + S+R + +++ P++Q
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 203
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 236
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPF 262
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 223
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQI 230
+ ++S G+ + +MV + P+ + Q+F ++V+S +
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 270
Query: 231 KGFIEKCL-VPASERLSAKDLLKDPFLQ 257
+ I CL + S+R + +++ P++Q
Sbjct: 271 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 118 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-----PTARSVIGTPEFMAPEL 172
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 173 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 201
+ + D+YS G + E++T E P++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 177
Query: 159 RSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TPE + APE + Y E VDI+S G + EM+
Sbjct: 178 TSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 118 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-----PTARSVIGTPEFMAPEL 172
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 173 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 201
+ + D+YS G + E++T E P++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 117 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 174
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 211
Query: 175 EEYNELVDIYSFGMCILEMVTFEYPY 200
+ ++S G+ + +MV + P+
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPF 237
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 118 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-----PTARSVIGTPEFMAPEL 172
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 149 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 173 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 201
+ + D+YS G + E++T E P++
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 237
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 38 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKT---VNMITELFTSGNLRQYRKKH 94
L G + +E+ +L +K N+V +DD ++ + +I +L + G L +
Sbjct: 56 LEGKEGSMENEIAVLHKIKHPNIVA-----LDDIYESGGHLYLIMQLVSGGELFDRIVEK 110
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIA 152
+ Q+L + YLH + I+HRDLK +N+ ++ I D GL+
Sbjct: 111 GFYTERDASRLIFQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-K 167
Query: 153 MQQPTA--RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQI 209
M+ P + + GTP ++APE L ++ Y++ VD +S G+ I ++ YP +N A++
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKL 226
Query: 210 FKKV 213
F+++
Sbjct: 227 FEQI 230
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 38 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKT---VNMITELFTSGNLRQYRKKH 94
L G + +E+ +L +K N+V +DD ++ + +I +L + G L +
Sbjct: 56 LEGKEGSMENEIAVLHKIKHPNIVA-----LDDIYESGGHLYLIMQLVSGGELFDRIVEK 110
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIA 152
+ Q+L + YLH + I+HRDLK +N+ ++ I D GL+
Sbjct: 111 GFYTERDASRLIFQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-K 167
Query: 153 MQQPTA--RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQI 209
M+ P + + GTP ++APE L ++ Y++ VD +S G+ I ++ YP +N A++
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKL 226
Query: 210 FKKV 213
F+++
Sbjct: 227 FEQI 230
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 38 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKT---VNMITELFTSGNLRQYRKKH 94
L G + +E+ +L +K N+V +DD ++ + +I +L + G L +
Sbjct: 56 LEGKEGSMENEIAVLHKIKHPNIVA-----LDDIYESGGHLYLIMQLVSGGELFDRIVEK 110
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIA 152
+ Q+L + YLH + I+HRDLK +N+ ++ I D GL+
Sbjct: 111 GFYTERDASRLIFQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-K 167
Query: 153 MQQPTA--RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQI 209
M+ P + + GTP ++APE L ++ Y++ VD +S G+ I ++ YP +N A++
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKL 226
Query: 210 FKKV 213
F+++
Sbjct: 227 FEQI 230
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELD 117
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 118 HERMSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSD-XTLKILDFGLA----RTAG 170
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSD-XTLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSD-XTLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELD 162
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 215
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G+ + EM+
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G+ + EM+
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 108 QILHGLVYLHSHNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAMQQPTA--RSVIG 163
Q+L + YLH + I+HRDLK +N+ ++ I D GL+ M+ P + + G
Sbjct: 124 QVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLSTACG 180
Query: 164 TPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
TP ++APE L ++ Y++ VD +S G+ I ++ YP +N A++F+++
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQI 230
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 105/221 (47%), Gaps = 21/221 (9%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSG-NLRQYRKKHKNVDIK 100
L K+ E+ +L ++ N++K + + + ++ E SG +L + +H +D
Sbjct: 73 LGKVTLEIAILSRVEHANIIKVLD--IFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEP 130
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA-R 159
+ RQ++ + YL + IIHRD+K +NI + + +K+ D G A +++
Sbjct: 131 LASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAEDF-TIKLIDFGSAAYLERGKLFY 187
Query: 160 SVIGTPEFMAPE-LYEEEYN--ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
+ GT E+ APE L Y EL +++S G+ + +V E P+ E + + V +
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPEL-EMWSLGVTLYTLVFEENPFCELE------ETVEAA 240
Query: 217 IKPASLAKVNDPQIKGFIEKCLVPASERLSA-KDLLKDPFL 256
I P L ++ + L P ER + + L+ DP++
Sbjct: 241 IHPPYLV---SKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKV 101
++ SE ++ + N+++ V V ++TE +G L + R +
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEG--VVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ 119
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ----PT 157
+ R I G+ YL + +HRDL NI VN N K+ D GL+ +++ PT
Sbjct: 120 LVGMLRGIASGMRYLAEMS--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPT 176
Query: 158 ARSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKN 205
S +G + APE + ++ D +S+G+ + E+++F E PY + N
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKV 101
++ SE ++ + N+++ V V ++TE +G L + R +
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEG--VVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ 117
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ----PT 157
+ R I G+ YL + +HRDL NI VN N K+ D GL+ +++ PT
Sbjct: 118 LVGMLRGIASGMRYLAEMS--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPT 174
Query: 158 ARSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKN 205
S +G + APE + ++ D +S+G+ + E+++F E PY + N
Sbjct: 175 YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV-DIK 100
Q +E ++ L+ N+V+ V++K + ++TE G+L Y R + ++V
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGD 117
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTA 158
+ ++ + + YL +N +HRDL N+ V+ ++ K+ D GL + Q T
Sbjct: 118 CLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQDTG 174
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPY 200
+ + ++ APE L E++++ D++SFG+ + E+ +F PY
Sbjct: 175 KLPV---KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EM+
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 134/310 (43%), Gaps = 84/310 (27%)
Query: 20 FAGIEVAWSRVKID--DVLQLPGDLQKLYSEVHLLKSLKDD-NVVKFYKSWVDDKKKTVN 76
F G VA R+ ID D+ + E+ LL D NV+++Y S D+ +
Sbjct: 37 FQGRPVAVKRMLIDFCDIALM---------EIKLLTESDDHPNVIRYYCSETTDRFLYIA 87
Query: 77 MITELFTSGNLRQYRKKHKNV---DIKVIKNW-----ARQILHGLVYLHSHNPPIIHRDL 128
+ EL + NL Q + KNV ++K+ K + RQI G+ +LHS IIHRDL
Sbjct: 88 L--EL-CNLNL-QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRDL 141
Query: 129 KCDNIFVN------------GNHGEVKIGDLGLAIAMQ--QPTARSVI----GTPEFMAP 170
K NI V+ + + I D GL + Q + R+ + GT + AP
Sbjct: 142 KPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAP 201
Query: 171 ELYEEEYN--------ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
EL EE N +DI+S G C+ F Y S+ K+P G K +
Sbjct: 202 ELLEESNNLQTKRRLTRSIDIFSMG-CV-----FYYILSKGKHPF--------GDKYSRE 247
Query: 223 AKVNDPQIKGFIE----KCLVPASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKM 278
+ + I+G KCL S A DL+ Q+ + DPLK P ++K+
Sbjct: 248 SNI----IRGIFSLDEMKCLHDRSLIAEATDLIS----QMIDH-----DPLKRP-TAMKV 293
Query: 279 LRLPMSGPSS 288
LR P+ P S
Sbjct: 294 LRHPLFWPKS 303
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNW 105
SE ++ N++ V K K V +ITE +G+L + RK + +
Sbjct: 79 SEASIMGQFDHPNIIHL--EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 136
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL + +HRDL NI VN N K+ D G++ ++ T R
Sbjct: 137 LRGIGSGMKYLSDMSA--VHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ APE + ++ D++S+G+ + E++++ E PY + N + K + G +
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAIEEGYR 252
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-XTLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELD 162
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 215
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELD 125
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 178
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EM+
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELD 118
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 171
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 30 VKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK----FYKSWVDDKKKT-VNMITELFTS 84
V I V+Q P + + L L N+V+ FY D++ +N++ E
Sbjct: 51 VAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD 110
Query: 85 G---NLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE 141
R Y ++ +IK + Q++ + LH + + HRD+K N+ VN G
Sbjct: 111 TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT 170
Query: 142 VKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVTFE 197
+K+ D G A ++ +P + I + + APEL + Y VDI+S G EM+ E
Sbjct: 171 LKLCDFGSAKKLSPSEPNV-AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV-DIK 100
Q +E ++ L+ N+V+ V++K + ++TE G+L Y R + ++V
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGD 289
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTA 158
+ ++ + + YL +N +HRDL N+ V+ ++ K+ D GL + Q T
Sbjct: 290 CLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQDTG 346
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPY 200
+ + ++ APE L E++++ D++SFG+ + E+ +F PY
Sbjct: 347 KLPV---KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELD 125
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 178
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELD 117
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 170
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 27/197 (13%)
Query: 42 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-DIK 100
L+ EV + + +NVV F + + + +IT L L + K V D+
Sbjct: 73 LKAFKREVMAYRQTRHENVVLFMGACMSPPH--LAIITSLCKGRTLYSVVRDAKIVLDVN 130
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLG-------LAIAM 153
+ A++I+ G+ YLH+ I+H+DLK N+F ++G+V I D G L
Sbjct: 131 KTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFY--DNGKVVITDFGLFSISGVLQAGR 186
Query: 154 QQPTARSVIGTPEFMAPELYEE----------EYNELVDIYSFGMCILEMVTFEYPYSEC 203
++ R G +APE+ + +++ D+++ G E+ E+P+
Sbjct: 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK-- 244
Query: 204 KNPAQ-IFKKVTSGIKP 219
PA+ I ++ +G+KP
Sbjct: 245 TQPAEAIIWQMGTGMKP 261
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 67 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELD 123
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 124 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 176
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 177 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EM+
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV-DIK 100
Q +E ++ L+ N+V+ V++K + ++TE G+L Y R + ++V
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGD 102
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTA 158
+ ++ + + YL +N +HRDL N+ V+ ++ K+ D GL + Q T
Sbjct: 103 CLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQDTG 159
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPY 200
+ + ++ APE L E++++ D++SFG+ + E+ +F PY
Sbjct: 160 KLPV---KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELD 118
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 171
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV-DIK 100
Q +E ++ L+ N+V+ V++K + ++TE G+L Y R + ++V
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGD 108
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTA 158
+ ++ + + YL +N +HRDL N+ V+ ++ K+ D GL + Q T
Sbjct: 109 CLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQDTG 165
Query: 159 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPY 200
+ + ++ APE L E ++ D++SFG+ + E+ +F PY
Sbjct: 166 KLPV---KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNW 105
SE ++ N++ V K K V +ITE +G+L + RK + +
Sbjct: 58 SEASIMGQFDHPNIIHL--EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 115
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL + +HRDL NI VN N K+ D G++ ++ T R
Sbjct: 116 LRGIGSGMKYLSDMS--YVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ APE + ++ D++S+G+ + E++++ E PY + N + K + G +
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAIEEGYR 231
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 47 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNW 105
SE ++ N++ V K K V +ITE +G+L + RK + +
Sbjct: 64 SEASIMGQFDHPNIIHL--EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 121
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARS 160
R I G+ YL + +HRDL NI VN N K+ D G++ ++ T R
Sbjct: 122 LRGIGSGMKYLSDMS--YVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 161 VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ APE + ++ D++S+G+ + E++++ E PY + N + K + G +
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAIEEGYR 237
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 20/163 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 177
Query: 159 RSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVT 195
S + PE + APE + Y E VDI+S G + EMV
Sbjct: 178 TSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVC 220
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EM+
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-XTLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EMV
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 69 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELD 125
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 178
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EM+
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EM+
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 177
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
S + TP + APE + Y E VDI+S G + EM+
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 130/313 (41%), Gaps = 86/313 (27%)
Query: 20 FAGIEVAWSRVKID--DVLQLPGDLQKLYSEVHLLKSLKDD-NVVKFYKSWVDDKKKTVN 76
F G VA R+ ID D+ + E+ LL D NV+++Y S D+ +
Sbjct: 55 FQGRPVAVKRMLIDFCDIALM---------EIKLLTESDDHPNVIRYYCSETTDRFLYIA 105
Query: 77 M------ITELFTSGNLRQYRKKHKNVDIKVIKNW-----ARQILHGLVYLHSHNPPIIH 125
+ + +L S N+ + ++K+ K + RQI G+ +LHS IIH
Sbjct: 106 LELCNLNLQDLVESKNV-------SDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIH 156
Query: 126 RDLKCDNIFVN------------GNHGEVKIGDLGLAIAMQ--QPTARSVI----GTPEF 167
RDLK NI V+ + + I D GL + Q R + GT +
Sbjct: 157 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGW 216
Query: 168 MAPELYEE----EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLA 223
APEL EE +DI+S G C+ F Y S+ K+P G K + +
Sbjct: 217 RAPELLEESTKRRLTRSIDIFSMG-CV-----FYYILSKGKHPF--------GDKYSRES 262
Query: 224 KVNDPQIKGFIE----KCLVPASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKML 279
+ I+G KCL S A DL+ Q+ + DPLK P ++K+L
Sbjct: 263 NI----IRGIFSLDEMKCLHDRSLIAEATDLIS----QMIDH-----DPLKRP-TAMKVL 308
Query: 280 RLPMSGPSSMDID 292
R P+ P S ++
Sbjct: 309 RHPLFWPKSKKLE 321
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 130/313 (41%), Gaps = 86/313 (27%)
Query: 20 FAGIEVAWSRVKID--DVLQLPGDLQKLYSEVHLLKSLKDD-NVVKFYKSWVDDKKKTVN 76
F G VA R+ ID D+ + E+ LL D NV+++Y S D+ +
Sbjct: 55 FQGRPVAVKRMLIDFCDIALM---------EIKLLTESDDHPNVIRYYCSETTDRFLYIA 105
Query: 77 M------ITELFTSGNLRQYRKKHKNVDIKVIKNW-----ARQILHGLVYLHSHNPPIIH 125
+ + +L S N+ + ++K+ K + RQI G+ +LHS IIH
Sbjct: 106 LELCNLNLQDLVESKNV-------SDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIH 156
Query: 126 RDLKCDNIFVN------------GNHGEVKIGDLGLAIAMQ--QPTARSVI----GTPEF 167
RDLK NI V+ + + I D GL + Q R + GT +
Sbjct: 157 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGW 216
Query: 168 MAPELYEE----EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLA 223
APEL EE +DI+S G C+ F Y S+ K+P G K + +
Sbjct: 217 RAPELLEESTKRRLTRSIDIFSMG-CV-----FYYILSKGKHPF--------GDKYSRES 262
Query: 224 KVNDPQIKGFIE----KCLVPASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKML 279
+ I+G KCL S A DL+ Q+ + DPLK P ++K+L
Sbjct: 263 NI----IRGIFSLDEMKCLHDRSLIAEATDLIS----QMIDH-----DPLKRP-TAMKVL 308
Query: 280 RLPMSGPSSMDID 292
R P+ P S ++
Sbjct: 309 RHPLFWPKSKKLE 321
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 29 RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
+V I + + + E ++ L +V+ Y V ++ + ++TE G L
Sbjct: 34 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG--VCLEQAPICLVTEFMEHGCLS 91
Query: 89 QYRKKHKNV-DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 147
Y + + + + + + G+ YL +IHRDL N V G + +K+ D
Sbjct: 92 DYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EACVIHRDLAARNCLV-GENQVIKVSDF 148
Query: 148 GLAIAMQQPTARSVIGTP---EFMAPELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSE 202
G+ + S GT ++ +PE++ Y+ D++SFG+ + E+ + + PY E
Sbjct: 149 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-E 207
Query: 203 CKNPAQIFKKVTSGIK 218
++ +++ + +++G +
Sbjct: 208 NRSNSEVVEDISTGFR 223
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 29/213 (13%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV- 97
P D+Q E +LK L N+VK + + + +I E G+L ++ N
Sbjct: 50 PVDVQ--MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY 107
Query: 98 -----DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF-VNGNHGE--VKIGDLGL 149
+ ++ R ++ G+ +L + I+HR++K NI V G G+ K+ D G
Sbjct: 108 GLPESEFLIV---LRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162
Query: 150 AIAMQQ-PTARSVIGTPEFMAPELYE---------EEYNELVDIYSFGMCILEMVTFEYP 199
A ++ S+ GT E++ P++YE ++Y VD++S G+ T P
Sbjct: 163 ARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
Query: 200 YSECKNP---AQIFKKVTSGIKPASLAKVNDPQ 229
+ + P ++ K+ +G +++ V +
Sbjct: 223 FRPFEGPRRNKEVMYKIITGKPSGAISGVQKAE 255
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 70 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELD 126
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPT 157
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA A
Sbjct: 127 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFM 183
Query: 158 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMV 194
+ T + APE + Y E VDI+S G + EM+
Sbjct: 184 MVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 20/163 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 73 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELD 129
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 130 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 182
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMVT 195
S + TP + APE + Y E VD++S G + EMV
Sbjct: 183 TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 225
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 20/163 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELD 124
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 177
Query: 159 RSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVT 195
S + PE + APE + Y E VD++S G + EMV
Sbjct: 178 TSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 220
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 43/214 (20%)
Query: 70 DKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK-NWARQI------LHGLVYLHSHNPP 122
D++ + +I + +GNL+++ D+ + +W +++ GL YLH+
Sbjct: 105 DERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAARGLHYLHTR--A 159
Query: 123 IIHRDLKCDNIFVNGNHGEVKIGDLGLA---IAMQQPTARSVI-GTPEFMAPELY-EEEY 177
IIHRD+K NI ++ N KI D G++ + Q V+ GT ++ PE + +
Sbjct: 160 IIHRDVKSINILLDENFVP-KITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRL 218
Query: 178 NELVDIYSFGMCIL---------------EMVTFEYPYSECKNPAQIFKKV----TSGIK 218
E D+YSFG+ + EMV E N Q+ + V I+
Sbjct: 219 TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR 278
Query: 219 PASLAKVNDPQIKGFIEKCLVPASE-RLSAKDLL 251
P SL K D + KCL +SE R S D+L
Sbjct: 279 PESLRKFGDTAV-----KCLALSSEDRPSMGDVL 307
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 132/310 (42%), Gaps = 84/310 (27%)
Query: 20 FAGIEVAWSRVKID--DVLQLPGDLQKLYSEVHLLKSLKDD-NVVKFYKSWVDDKKKTVN 76
F G VA R+ ID D+ + E+ LL D NV+++Y S D+ +
Sbjct: 37 FQGRPVAVKRMLIDFCDIALM---------EIKLLTESDDHPNVIRYYCSETTDRFLYIA 87
Query: 77 MITELFTSGNLRQYRKKHKNV---DIKVIKNW-----ARQILHGLVYLHSHNPPIIHRDL 128
+ EL + NL Q + KNV ++K+ K + RQI G+ +LHS IIHRDL
Sbjct: 88 L--EL-CNLNL-QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRDL 141
Query: 129 KCDNIFVN------------GNHGEVKIGDLGLAIAMQ--QPTARSVI----GTPEFMAP 170
K NI V+ + + I D GL + Q R + GT + AP
Sbjct: 142 KPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAP 201
Query: 171 ELYEEEYN--------ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 222
EL EE N +DI+S G C+ F Y S+ K+P G K +
Sbjct: 202 ELLEESNNLQTKRRLTRSIDIFSMG-CV-----FYYILSKGKHPF--------GDKYSRE 247
Query: 223 AKVNDPQIKGFIE----KCLVPASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKM 278
+ + I+G KCL S A DL+ Q+ + DPLK P ++K+
Sbjct: 248 SNI----IRGIFSLDEMKCLHDRSLIAEATDLIS----QMIDH-----DPLKRP-TAMKV 293
Query: 279 LRLPMSGPSS 288
LR P+ P S
Sbjct: 294 LRHPLFWPKS 303
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 72 KKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILH----GLVYLHSHNPPIIHRD 127
K+ + +I E G L + + + D + A +I+ + +LHSHN I HRD
Sbjct: 98 KRCLLIIMECMEGGEL--FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRD 153
Query: 128 LKCDNIFVNGNHGE--VKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIY 184
+K +N+ + +K+ D G A Q ++ TP ++APE L E+Y++ D++
Sbjct: 154 VKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 213
Query: 185 SFGMCILEMVTFEYP 199
S G+ I+ ++ +P
Sbjct: 214 SLGV-IMYILLCGFP 227
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NW 105
E ++ NVV V + K V ++ E +G L + +KH VI+
Sbjct: 94 EASIMGQFDHPNVVHL--EGVVTRGKPVMIVIEFMENGALDAFLRKHDG-QFTVIQLVGM 150
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 165
R I G+ YL +HRDL NI VN N K+ D GL+ ++ T
Sbjct: 151 LRGIAAGMRYLADMG--YVHRDLAARNILVNSNL-VCKVSDFGLSRVIEDDPEAVYTTTG 207
Query: 166 -----EFMAPELYE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
+ APE + ++ D++S+G+ + E++++ E PY + N + K + G +
Sbjct: 208 GKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAIEEGYR 266
Query: 219 -PASL 222
PA +
Sbjct: 267 LPAPM 271
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 43/214 (20%)
Query: 70 DKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK-NWARQI------LHGLVYLHSHNPP 122
D++ + +I + +GNL+++ D+ + +W +++ GL YLH+
Sbjct: 105 DERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAARGLHYLHTR--A 159
Query: 123 IIHRDLKCDNIFVNGNHGEVKIGDLGLA---IAMQQPTARSVI-GTPEFMAPELY-EEEY 177
IIHRD+K NI ++ N KI D G++ + Q V+ GT ++ PE + +
Sbjct: 160 IIHRDVKSINILLDENFVP-KITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRL 218
Query: 178 NELVDIYSFGMCIL---------------EMVTFEYPYSECKNPAQIFKKV----TSGIK 218
E D+YSFG+ + EMV E N Q+ + V I+
Sbjct: 219 TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR 278
Query: 219 PASLAKVNDPQIKGFIEKCLVPASE-RLSAKDLL 251
P SL K D + KCL +SE R S D+L
Sbjct: 279 PESLRKFGDTAV-----KCLALSSEDRPSMGDVL 307
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 72 KKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILH----GLVYLHSHNPPIIHRD 127
K+ + +I E G L + + + D + A +I+ + +LHSHN I HRD
Sbjct: 79 KRCLLIIMECMEGGEL--FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRD 134
Query: 128 LKCDNIFVNGNHGE--VKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIY 184
+K +N+ + +K+ D G A Q ++ TP ++APE L E+Y++ D++
Sbjct: 135 VKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 194
Query: 185 SFGMCILEMVTFEYP 199
S G+ I+ ++ +P
Sbjct: 195 SLGV-IMYILLCGFP 208
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 39 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV- 97
P D+Q E +LK L N+VK + + + +I E G+L ++ N
Sbjct: 50 PVDVQ--MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY 107
Query: 98 -----DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF-VNGNHGE--VKIGDLGL 149
+ ++ R ++ G+ +L + I+HR++K NI V G G+ K+ D G
Sbjct: 108 GLPESEFLIV---LRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162
Query: 150 AIAMQQPTA-RSVIGTPEFMAPELYE---------EEYNELVDIYSFGMCILEMVTFEYP 199
A ++ + GT E++ P++YE ++Y VD++S G+ T P
Sbjct: 163 ARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
Query: 200 YSECKNP---AQIFKKVTSGIKPASLAKVNDPQ 229
+ + P ++ K+ +G +++ V +
Sbjct: 223 FRPFEGPRRNKEVMYKIITGKPSGAISGVQKAE 255
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----QQP 156
IK + +L+GL Y+H + I+HRD+K N+ + + G +K+ D GLA A QP
Sbjct: 127 IKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQP 183
Query: 157 TA-RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVT 195
+ + T + PEL E +Y +D++ G + EM T
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 20/163 (12%)
Query: 43 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVD 98
++ Y E+ L+K + N++ + K + V ++ EL NL Q + +D
Sbjct: 62 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELD 118
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+ + Q+L G+ +LHS IIHRDLK NI V + +KI D GLA +
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAG 171
Query: 159 RSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMVT 195
S + TP + APE + Y E VD++S G + EMV
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 214
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----QQP 156
IK + +L+GL Y+H + I+HRD+K N+ + + G +K+ D GLA A QP
Sbjct: 127 IKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQP 183
Query: 157 TA-RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVT 195
+ + T + PEL E +Y +D++ G + EM T
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----QQP 156
IK + +L+GL Y+H + I+HRD+K N+ + + G +K+ D GLA A QP
Sbjct: 127 IKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQP 183
Query: 157 TA-RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVT 195
+ + T + PEL E +Y +D++ G + EM T
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----QQP 156
IK + +L+GL Y+H + I+HRD+K N+ + + G +K+ D GLA A QP
Sbjct: 126 IKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQP 182
Query: 157 TA-RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVT 195
+ + T + PEL E +Y +D++ G + EM T
Sbjct: 183 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 75 VNMITELFTSGNLRQYRK-KHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNI 133
V M+ E+ L +K +H+ + + +K ++Q+L GL Y+H IIH D+K +N+
Sbjct: 105 VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR-RCGIIHTDIKPENV 163
Query: 134 FVN-----GNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFG 187
+ N ++KI DLG A + S I T E+ +PE L + DI+S
Sbjct: 164 LMEIVDSPENLIQIKIADLGNACWYDEHYTNS-IQTREYRSPEVLLGAPWGCGADIWSTA 222
Query: 188 MCILEMVTFEYPY 200
I E++T ++ +
Sbjct: 223 CLIFELITGDFLF 235
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q R+ + DI+ + +IL L Y HS I+HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLRQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 157
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 75 VNMITELFTSGNLRQYRK-KHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNI 133
V M+ E+ L +K +H+ + + +K ++Q+L GL Y+H IIH D+K +N+
Sbjct: 105 VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR-RCGIIHTDIKPENV 163
Query: 134 FVN-----GNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFG 187
+ N ++KI DLG A + S I T E+ +PE L + DI+S
Sbjct: 164 LMEIVDSPENLIQIKIADLGNACWYDEHYTNS-IQTREYRSPEVLLGAPWGCGADIWSTA 222
Query: 188 MCILEMVTFEYPY 200
I E++T ++ +
Sbjct: 223 CLIFELITGDFLF 235
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 39 PGDLQKLYSEVHLLKSLKDD-NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 97
P K+ E+ +L++L+ N++ D +T ++ E + + +Q + +
Sbjct: 72 PVKKNKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDY 131
Query: 98 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 157
DI+ + +IL L Y HS I+HRD+K N+ ++ H ++++ D GLA
Sbjct: 132 DIRF---YMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
Query: 158 ARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVTFEYPY 200
+V + + F PEL + Y+ +D++S G + M+ + P+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N++K + D KT ++ E + + +Q + + DI+ + ++L L Y HS
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF---YMYELLKALDYCHS 150
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EE 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 151 KG--IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 176 EYNELVDIYSFGMCILEMVTFEYPY 200
Y+ +D++S G + M+ P+
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N++K + D KT ++ E + + +Q + + DI+ + ++L L Y HS
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF---YMYELLKALDYCHS 155
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EE 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 156 KG--IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 176 EYNELVDIYSFGMCILEMVTFEYPY 200
Y+ +D++S G + M+ P+
Sbjct: 214 MYDYSLDMWSLGCMLASMIFRREPF 238
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 30 VKIDDVLQLPGDL---QKLYSEVHLLKSLKDDNVVKFYKSWVD---DKKKTVNMITELFT 83
V I +L++ DL +++ E+ +L L D+VVK + +K + ++ E+
Sbjct: 81 VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD 140
Query: 84 SGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
S + +R ++ IK +L G+ Y+HS I+HRDLK N VN + VK
Sbjct: 141 SDFKKLFRTPVYLTELH-IKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQD-CSVK 196
Query: 144 IGDLGLAIAMQQPT--------------------------ARSVIG---TPEFMAPE--L 172
+ D GLA + P R + G T + APE L
Sbjct: 197 VCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL 256
Query: 173 YEEEYNELVDIYSFGMCILEMVTF 196
+E Y E +D++S G E++
Sbjct: 257 LQENYTEAIDVWSIGCIFAELLNM 280
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 33/177 (18%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNL-----RQYRKKH 94
D Q EV+ L + +VV+++ +W +D + E G+L YR
Sbjct: 51 DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMS 108
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN------------------ 136
+ + +K+ Q+ GL Y+HS + ++H D+K NIF++
Sbjct: 109 YFKEAE-LKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 165
Query: 137 GNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEEYNEL--VDIYSFGMCIL 191
N KIGDLG + P G F+A E+ +E Y L DI++ + ++
Sbjct: 166 SNKVMFKIGDLGHVTRISSPQVEE--GDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 38/175 (21%)
Query: 119 HNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQ---------QPTARSVIGTPEF 167
HN I HRDLK +NI VKI D GL ++ P + G+ E+
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 168 MAPELYE---EE---YNELVDIYSFGMCILEMVTFEYP------YSEC------KNPA-- 207
MAPE+ E EE Y++ D++S G+ IL ++ YP S+C PA
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGV-ILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246
Query: 208 -QIFKKVTSG---IKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQ 257
+F+ + G A ++ K I K LV A +RLSA +L+ P++Q
Sbjct: 247 NMLFESIQEGKYEFPDKDWAHIS-CAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 33/177 (18%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNL-----RQYRKKH 94
D Q EV+ L + +VV+++ +W +D + E G+L YR
Sbjct: 53 DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMS 110
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN------------------ 136
+ + +K+ Q+ GL Y+HS + ++H D+K NIF++
Sbjct: 111 YFKEAE-LKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167
Query: 137 GNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEEYNEL--VDIYSFGMCIL 191
N KIGDLG + P G F+A E+ +E Y L DI++ + ++
Sbjct: 168 SNKVMFKIGDLGHVTRISSPQVEE--GDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 29 RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
+V I + + + E ++ L +V+ Y V ++ + ++ E G L
Sbjct: 33 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLS 90
Query: 89 QYRKKHKNV-DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 147
Y + + + + + + G+ YL +IHRDL N V G + +K+ D
Sbjct: 91 DYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EASVIHRDLAARNCLV-GENQVIKVSDF 147
Query: 148 GLAIAMQQPTARSVIGTP---EFMAPELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSE 202
G+ + S GT ++ +PE++ Y+ D++SFG+ + E+ + + PY E
Sbjct: 148 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-E 206
Query: 203 CKNPAQIFKKVTSGIK 218
++ +++ + +++G +
Sbjct: 207 NRSNSEVVEDISTGFR 222
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 33/177 (18%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNL-----RQYRKKH 94
D Q EV+ L + +VV+++ +W +D + E G+L YR
Sbjct: 49 DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMS 106
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN------------------ 136
+ + +K+ Q+ GL Y+HS + ++H D+K NIF++
Sbjct: 107 YFKEAE-LKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 163
Query: 137 GNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEEYNEL--VDIYSFGMCIL 191
N KIGDLG + P G F+A E+ +E Y L DI++ + ++
Sbjct: 164 SNKVMFKIGDLGHVTRISSPQVEE--GDSRFLANEVLQENYTHLPKADIFALALTVV 218
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 33/177 (18%)
Query: 41 DLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGNL-----RQYRKKH 94
D Q EV+ L + +VV+++ +W +D + E G+L YR
Sbjct: 51 DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMS 108
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN------------------ 136
+ + +K+ Q+ GL Y+HS + ++H D+K NIF++
Sbjct: 109 YFKEAE-LKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 165
Query: 137 GNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEEYNEL--VDIYSFGMCIL 191
N KIGDLG + P G F+A E+ +E Y L DI++ + ++
Sbjct: 166 SNKVMFKIGDLGHVTRISSPQVEE--GDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 56 KDDNVVKFYKSWVDD--KKKTVNMITELFTSG---NLRQYRKKHKNVDIKVIKNWARQIL 110
K++ V +KS + + + K +N+I E L+ + + +++ + +I + Q+
Sbjct: 92 KNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLF 151
Query: 111 HGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV--IGTPEFM 168
+ ++HS I HRD+K N+ VN +K+ D G A + P+ SV I + +
Sbjct: 152 RAVGFIHSLG--ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL-IPSEPSVAXICSRFYR 208
Query: 169 APELY--EEEYNELVDIYSFGMCILEMV 194
APEL EY +D++S G E++
Sbjct: 209 APELMLGATEYTPSIDLWSIGCVFGELI 236
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIK 100
E ++ L N+V+ + + + + EL G+L+ + ++ + ++ +
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTA 158
+ + AR I G YL ++ IHRD+ N + G KIGD G+A + + +
Sbjct: 156 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 159 RSVIGTP----EFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
G ++M PE + E + D +SFG+ + E+ + Y K+ ++ + V
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
Query: 214 TSG 216
TSG
Sbjct: 274 TSG 276
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 29 RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
+V I + + + E ++ L +V+ Y V ++ + ++ E G L
Sbjct: 36 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLS 93
Query: 89 QYRKKHKNV-DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 147
Y + + + + + + G+ YL +IHRDL N V N +K+ D
Sbjct: 94 DYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDF 150
Query: 148 GLAIAMQQPTARSVIGTP---EFMAPELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSE 202
G+ + S GT ++ +PE++ Y+ D++SFG+ + E+ + + PY E
Sbjct: 151 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-E 209
Query: 203 CKNPAQIFKKVTSGIK 218
++ +++ + +++G +
Sbjct: 210 NRSNSEVVEDISTGFR 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIK 100
E ++ L N+V+ + + + + EL G+L+ + ++ + ++ +
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTA 158
+ + AR I G YL ++ IHRD+ N + G KIGD G+A + + +
Sbjct: 142 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 159 RSVIGTP----EFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
G ++M PE + E + D +SFG+ + E+ + Y K+ ++ + V
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
Query: 214 TSG 216
TSG
Sbjct: 260 TSG 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 29 RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
+V I + + + E ++ L +V+ Y V ++ + ++ E G L
Sbjct: 33 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLS 90
Query: 89 QYRKKHKNV-DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 147
Y + + + + + + G+ YL +IHRDL N V G + +K+ D
Sbjct: 91 DYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EACVIHRDLAARNCLV-GENQVIKVSDF 147
Query: 148 GLAIAMQQPTARSVIGTP---EFMAPELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSE 202
G+ + S GT ++ +PE++ Y+ D++SFG+ + E+ + + PY E
Sbjct: 148 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-E 206
Query: 203 CKNPAQIFKKVTSGIK 218
++ +++ + +++G +
Sbjct: 207 NRSNSEVVEDISTGFR 222
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 29 RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR 88
+V I + + + E ++ L +V+ Y V ++ + ++ E G L
Sbjct: 31 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLS 88
Query: 89 QYRKKHKNV-DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 147
Y + + + + + + G+ YL +IHRDL N V G + +K+ D
Sbjct: 89 DYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EACVIHRDLAARNCLV-GENQVIKVSDF 145
Query: 148 GLAIAMQQPTARSVIGTP---EFMAPELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSE 202
G+ + S GT ++ +PE++ Y+ D++SFG+ + E+ + + PY E
Sbjct: 146 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-E 204
Query: 203 CKNPAQIFKKVTSGIK 218
++ +++ + +++G +
Sbjct: 205 NRSNSEVVEDISTGFR 220
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-DIKVIKNWA 106
E ++ L +V+ Y V ++ + ++ E G L Y + + + + +
Sbjct: 72 EAEVMMKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 129
Query: 107 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP- 165
+ G+ YL +IHRDL N V N +K+ D G+ + S GT
Sbjct: 130 LDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKF 186
Query: 166 --EFMAPELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK 218
++ +PE++ Y+ D++SFG+ + E+ + + PY E ++ +++ + +++G +
Sbjct: 187 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 242
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 157
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIK 100
E ++ N+V+ + + + M EL G+L+ + ++ + ++ +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILM--ELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTA 158
+ + AR I G YL ++ IHRD+ N + G KIGD G+A + + +
Sbjct: 141 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 159 RSVIGTP----EFMAPELYEEE-YNELVDIYSFGMCILEMVTFEY-PYSECKNPAQIFKK 212
G ++M PE + E + D +SFG+ + E+ + Y PY K+ ++ +
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 257
Query: 213 VTSG 216
VTSG
Sbjct: 258 VTSG 261
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIK 100
E ++ N+V+ + + + M EL G+L+ + ++ + ++ +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILM--ELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTA 158
+ + AR I G YL ++ IHRD+ N + G KIGD G+A + + +
Sbjct: 156 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 159 RSVIGTP----EFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
G ++M PE + E + D +SFG+ + E+ + Y K+ ++ + V
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
Query: 214 TSG 216
TSG
Sbjct: 274 TSG 276
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 102 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE-VKIGDLGLAIAMQ-QPTAR 159
I ++ Q+ L +LHSHN I H D++ +NI +KI + G A ++ R
Sbjct: 104 IVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161
Query: 160 SVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK 218
+ PE+ APE+++ + + D++S G + +++ P+ N QI + + +
Sbjct: 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENIMNAEY 220
Query: 219 PASLAKVNDPQIKG--FIEKCLVPASE-RLSAKDLLKDPFL--QVENQKEPICDPLK 270
+ I+ F+++ LV + R++A + L+ P+L ++E + LK
Sbjct: 221 TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLK 277
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 157
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 158 KPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 36/205 (17%)
Query: 14 YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLK-DDNVVKFYKSWVDDKK 72
+K+ D G VA KI D Q D Q+ + E+ +L L +N+V D
Sbjct: 26 WKSIDRRTGEVVAVK--KIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83
Query: 73 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA-RQILHGLVYLHSHNPPIIHRDLKCD 131
+ V ++ + + R N+ V K + Q++ + YLHS ++HRD+K
Sbjct: 84 RDVYLVFDYMETDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG--LLHRDMKPS 138
Query: 132 NIFVNGNHGEVKIGDLGLAIAM-----------------------QQPTARSVIGTPEFM 168
NI +N VK+ D GL+ + QP + T +
Sbjct: 139 NILLNA-ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYR 197
Query: 169 APE--LYEEEYNELVDIYSFGMCIL 191
APE L +Y + +D++S G CIL
Sbjct: 198 APEILLGSTKYTKGIDMWSLG-CIL 221
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 157
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 108 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 162
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 163 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 222
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 223 LGCMLASMIFRKEPF 237
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 157
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 157
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 157
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 102 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 156
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 157 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 216
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 217 LGCMLASMIFRKEPF 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 157
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 102 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 156
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 157 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 216
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 217 LGCMLASMIFRKEPF 231
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 77 MITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
++ EL G+L+ + ++ + ++ + + + AR I G YL ++ IHRD+
Sbjct: 117 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIA 174
Query: 130 CDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPELYEEE-YNELVD 182
N + G KIGD G+A + + + G ++M PE + E + D
Sbjct: 175 ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 234
Query: 183 IYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
+SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 235 TWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 268
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIK 100
E ++ N+V+ + + + + EL G+L+ + ++ + ++ +
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAML 132
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTA 158
+ + AR I G YL ++ IHRD+ N + G KIGD G+A + + +
Sbjct: 133 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 190
Query: 159 RSVIGTP----EFMAPELYEEE-YNELVDIYSFGMCILEMVTFEY-PYSECKNPAQIFKK 212
G ++M PE + E + D +SFG+ + E+ + Y PY K+ ++ +
Sbjct: 191 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 249
Query: 213 VTSG 216
VTSG
Sbjct: 250 VTSG 253
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 157
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 77 MITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
++ EL G+L+ + ++ + ++ + + + AR I G YL ++ IHRD+
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIA 168
Query: 130 CDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPELYEEE-YNELVD 182
N + G KIGD G+A + + + G ++M PE + E + D
Sbjct: 169 ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 228
Query: 183 IYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
+SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 229 TWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 157
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 77 MITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
++ EL G+L+ + ++ + ++ + + + AR I G YL ++ IHRD+
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIA 168
Query: 130 CDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPELYEEE-YNELVD 182
N + G KIGD G+A + + + G ++M PE + E + D
Sbjct: 169 ARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 228
Query: 183 IYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
+SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 229 TWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 101 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 155
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 185
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 156 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 215
Query: 186 FGMCILEMVTFEYPY 200
G + M+ + P+
Sbjct: 216 LGCMLASMIFRKEPF 230
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIK 100
E ++ N+V+ + + + + EL G+L+ + ++ + ++ +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTA 158
+ + AR I G YL ++ IHRD+ N + G KIGD G+A + + +
Sbjct: 141 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 159 RSVIGTP----EFMAPELYEEE-YNELVDIYSFGMCILEMVTFEY-PYSECKNPAQIFKK 212
G ++M PE + E + D +SFG+ + E+ + Y PY K+ ++ +
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 257
Query: 213 VTSG 216
VTSG
Sbjct: 258 VTSG 261
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 164
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 165 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 222
Query: 176 EYNELVDIYSFGMCILEMV----TFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---DP 228
+Y+ +D++S G M+ F Y + +I K + + A L K DP
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDP 282
Query: 229 QIKGFIEKCLVPASERLSAKDLLKDPFLQVENQ 261
Q++ + R S K LK F+ +NQ
Sbjct: 283 QLEALV--------GRHSRKPWLK--FMNADNQ 305
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIK 100
E ++ N+V+ + + + + EL G+L+ + ++ + ++ +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTA 158
+ + AR I G YL ++ IHRD+ N + G KIGD G+A + + +
Sbjct: 156 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 159 RSVIGTP----EFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
G ++M PE + E + D +SFG+ + E+ + Y K+ ++ + V
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
Query: 214 TSG 216
TSG
Sbjct: 274 TSG 276
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 77 MITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
++ EL G+L+ + ++ + ++ + + + AR I G YL ++ IHRD+
Sbjct: 127 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIA 184
Query: 130 CDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPELYEEE-YNELVD 182
N + G KIGD G+A + + + G ++M PE + E + D
Sbjct: 185 ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 244
Query: 183 IYSFGMCILEMVTFEY-PYSECKNPAQIFKKVTSG 216
+SFG+ + E+ + Y PY K+ ++ + VTSG
Sbjct: 245 TWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSG 278
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 77 MITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLK 129
++ EL G+L+ + ++ + ++ + + + AR I G YL ++ IHRD+
Sbjct: 137 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIA 194
Query: 130 CDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPELYEEE-YNELVD 182
N + G KIGD G+A + + + G ++M PE + E + D
Sbjct: 195 ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 254
Query: 183 IYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 216
+SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 255 TWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 288
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 14 YKAFDEFAGIEVAWSRVK--IDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDD- 70
Y A+D+ VA +V +D++ D +++ E+ +L LK D +++ Y + D
Sbjct: 43 YLAYDKNTEKNVAIKKVNRMFEDLI----DCKRILREITILNRLKSDYIIRLYDLIIPDD 98
Query: 71 --KKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
K + ++ E+ S +L++ K + + IK +L G ++H IIHRDL
Sbjct: 99 LLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG--IIHRDL 155
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE---------------------- 166
K N +N + VK+ D GLA + +++ E
Sbjct: 156 KPANCLLNQD-CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVT 214
Query: 167 --FMAPE--LYEEEYNELVDIYSFGMCILEMVT 195
+ APE L +E Y + +DI+S G E++
Sbjct: 215 RWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 50 HLLKSLKDD--NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK--NVDIKVIKNW 105
HL K KD+ NV+ +++ + + M EL S NL + KK+K + +++ +
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTF--RNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKF 205
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQPTARSVIG 163
A IL L LH + IIH DLK +NI + G G +K+ D G + Q + I
Sbjct: 206 AHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEHQ-RVYTXIQ 261
Query: 164 TPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
+ + APE + Y +D++S G CIL + YP
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLG-CILAELLTGYP 297
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 50 HLLKSLKDD--NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK--NVDIKVIKNW 105
HL K KD+ NV+ +++ + + M EL S NL + KK+K + +++ +
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTF--RNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKF 205
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQPTARSVIG 163
A IL L LH + IIH DLK +NI + G G +K+ D G + Q + I
Sbjct: 206 AHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEHQ-RVYTXIQ 261
Query: 164 TPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
+ + APE + Y +D++S G CIL + YP
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLG-CILAELLTGYP 297
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 130
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ YL S +HRDL N ++ VK+ D GLA M
Sbjct: 131 VKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEX 187
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 188 XSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 20/184 (10%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIK 100
E ++ N+V+ + + + + EL G+L+ + ++ + ++ +
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAML 158
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTA 158
+ + AR I G YL ++ IHRD+ N + G KIGD G+A + +
Sbjct: 159 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 216
Query: 159 RSVIGTP----EFMAPELYEEE-YNELVDIYSFGMCILEMVTFEY-PYSECKNPAQIFKK 212
G ++M PE + E + D +SFG+ + E+ + Y PY K+ ++ +
Sbjct: 217 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 275
Query: 213 VTSG 216
VTSG
Sbjct: 276 VTSG 279
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 18/183 (9%)
Query: 48 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIK 100
E ++ N+V+ + + + + EL G+L+ + ++ + ++ +
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAML 181
Query: 101 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTA 158
+ + AR I G YL ++ IHRD+ N + G KIGD G+A + +
Sbjct: 182 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 239
Query: 159 RSVIGTP----EFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 213
G ++M PE + E + D +SFG+ + E+ + Y K+ ++ + V
Sbjct: 240 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 299
Query: 214 TSG 216
TSG
Sbjct: 300 TSG 302
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 91 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 149
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ YL S +HRDL N ++ VK+ D GLA M
Sbjct: 150 VKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEY 206
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 207 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 50 HLLKSLKDD--NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK--NVDIKVIKNW 105
HL K KD+ NV+ +++ + + M EL S NL + KK+K + +++ +
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTF--RNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKF 205
Query: 106 ARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQPTARSVIG 163
A IL L LH + IIH DLK +NI + G G +K+ D G + Q I
Sbjct: 206 AHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEHQ-RVYXXIQ 261
Query: 164 TPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
+ + APE + Y +D++S G CIL + YP
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLG-CILAELLTGYP 297
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 31 KIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY 90
+I D+ G++ + +E ++K NV+ + + + ++ G+LR +
Sbjct: 60 RITDI----GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 114
Query: 91 -RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
R + N +K + + Q+ G+ YL S +HRDL N ++ VK+ D GL
Sbjct: 115 IRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGL 171
Query: 150 AIAMQQPTARSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
A M SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 172 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 76 NMITELFTSGNLRQYRKKHKN--VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNI 133
+IT G+L + N VD +A + G+ +LH+ P I L ++
Sbjct: 85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSV 144
Query: 134 FVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELY----EEEYNELVDIYSFGMC 189
++ + +I + + Q P + P ++APE E+ D++SF +
Sbjct: 145 MIDEDM-TARISMADVKFSFQSP---GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVL 200
Query: 190 ILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL 238
+ E+VT E P+++ N K G++P ++ P + ++ C+
Sbjct: 201 LWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS-PHVSKLMKICM 248
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 38/175 (21%)
Query: 119 HNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQ---------QPTARSVIGTPEF 167
HN I HRDLK +NI VKI D L ++ P + G+ E+
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 168 MAPELYE---EE---YNELVDIYSFGMCILEMVTFEYP------YSEC------KNPA-- 207
MAPE+ E EE Y++ D++S G+ IL ++ YP S+C PA
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGV-ILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246
Query: 208 -QIFKKVTSG---IKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQ 257
+F+ + G A ++ K I K LV A +RLSA +L+ P++Q
Sbjct: 247 NMLFESIQEGKYEFPDKDWAHIS-CAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 31 KIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY 90
+I D+ G++ + +E ++K NV+ + + + ++ G+LR +
Sbjct: 87 RITDI----GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 141
Query: 91 -RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
R + N +K + + Q+ G+ YL S +HRDL N ++ VK+ D GL
Sbjct: 142 IRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGL 198
Query: 150 AIAMQQPTARSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
A M SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 199 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 129
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ YL S +HRDL N ++ VK+ D GLA M
Sbjct: 130 VKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEY 186
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 187 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 131
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ YL S +HRDL N ++ VK+ D GLA M
Sbjct: 132 VKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEY 188
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 189 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 70 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 128
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ YL S +HRDL N ++ VK+ D GLA M
Sbjct: 129 VKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEY 185
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 186 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 68 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 126
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ YL S +HRDL N ++ VK+ D GLA M
Sbjct: 127 VKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEY 183
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 145
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 146 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 203
Query: 176 EYNELVDIYSFGMCILEMVTFEYPY 200
+Y+ +D++S G M+ + P+
Sbjct: 204 DYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 176 EYNELVDIYSFGMCILEMVTFEYPY 200
+Y+ +D++S G M+ + P+
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 130
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ YL S +HRDL N ++ VK+ D GLA M
Sbjct: 131 VKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEY 187
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 188 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 31 KIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY 90
+I D+ G++ + +E ++K NV+ + + + ++ G+LR +
Sbjct: 68 RITDI----GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 122
Query: 91 -RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
R + N +K + + Q+ G+ YL S +HRDL N ++ VK+ D GL
Sbjct: 123 IRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGL 179
Query: 150 AIAMQQPTARSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
A M SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 180 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 176 EYNELVDIYSFGMCILEMVTFEYPY 200
+Y+ +D++S G M+ + P+
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 144
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 145 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 176 EYNELVDIYSFGMCILEMVTFEYPY 200
+Y+ +D++S G M+ + P+
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 176 EYNELVDIYSFGMCILEMVTFEYPY 200
+Y+ +D++S G M+ + P+
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 176 EYNELVDIYSFGMCILEMVTFEYPY 200
+Y+ +D++S G M+ + P+
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 176 EYNELVDIYSFGMCILEMVTFEYPY 200
+Y+ +D++S G M+ + P+
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 144
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 145 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 176 EYNELVDIYSFGMCILEMVTFEYPY 200
+Y+ +D++S G M+ + P+
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 59 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 118
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 119 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 175
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 176 EYNELVDIYSFGMCILEMVTFEYPY 200
+Y+ +D++S G M+ + P+
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 24/106 (22%)
Query: 104 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG 163
+++ Q+ G+ +L S IHRDL NI ++ N+ VKI D GL AR +
Sbjct: 203 SYSFQVARGMEFLSSRK--CIHRDLAARNILLSENN-VVKICDFGL--------ARDIYK 251
Query: 164 TPEF------------MAPE-LYEEEYNELVDIYSFGMCILEMVTF 196
P++ MAPE ++++ Y+ D++S+G+ + E+ +
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSL 297
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 31 KIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY 90
+I D+ G++ + +E ++K NV+ + + + ++ G+LR +
Sbjct: 127 RITDI----GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 181
Query: 91 -RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL 149
R + N +K + + Q+ G+ +L S +HRDL N ++ VK+ D GL
Sbjct: 182 IRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGL 238
Query: 150 AIAMQQPTARSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
A M SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 239 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 91 RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA 150
R K + + + + +IL L YLHS +++ DLK +NI + ++K+ DLG
Sbjct: 173 RSKGQKLPVAEAIAYLLEILPALSYLHSIG--LVYNDLKPENIMLTEE--QLKLIDLGAV 228
Query: 151 IAMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYP 199
+ + + GTP F APE+ DIY+ G L +T + P
Sbjct: 229 SRIN--SFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRT-LAALTLDLP 274
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 44/231 (19%)
Query: 14 YKAFDEFAGIEVAWSRVK--IDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDD- 70
Y A+D+ A VA +V +D++ D +++ E+ +L LK D +++ + + +
Sbjct: 45 YLAYDKNANKNVAIKKVNRMFEDLI----DCKRILREITILNRLKSDYIIRLHDLIIPED 100
Query: 71 --KKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 128
K + ++ E+ S +L++ K + + +K +L G ++H IIHRDL
Sbjct: 101 LLKFDELYIVLEIADS-DLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESG--IIHRDL 157
Query: 129 KCDNIFVNGNHGEVKIGDLGLAIAMQ---------------------------QPTARSV 161
K N +N + VKI D GLA + + S
Sbjct: 158 KPANCLLNQD-CSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSH 216
Query: 162 IGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIF 210
+ T + APE L +E Y +DI+S G E++ S NP F
Sbjct: 217 VVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMM--KSHINNPTNRF 265
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 131
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ +L S +HRDL N ++ VK+ D GLA M
Sbjct: 132 VKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEF 188
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 189 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 78 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 136
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ +L S +HRDL N ++ VK+ D GLA M
Sbjct: 137 VKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEF 193
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 194 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 132
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ +L S +HRDL N ++ VK+ D GLA M
Sbjct: 133 VKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEF 189
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 190 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 131
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ +L S +HRDL N ++ VK+ D GLA M
Sbjct: 132 VKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEF 188
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 189 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 132
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ +L S +HRDL N ++ VK+ D GLA M
Sbjct: 133 VKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMLDKEF 189
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 190 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 40 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVD 98
G++ + +E ++K NV+ + + + ++ G+LR + R + N
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPT 129
Query: 99 IKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 158
+K + + Q+ G+ +L S +HRDL N ++ VK+ D GLA M
Sbjct: 130 VKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEF 186
Query: 159 RSVIGTP------EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 199
SV ++MA E L +++ D++SFG+ + E++T P
Sbjct: 187 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 104 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG 163
++A + G+ YL IHRDL NI V N+ KI D GL+ + +++
Sbjct: 146 HFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY-VAKIADFGLSRGQEVYVKKTMGR 202
Query: 164 TP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
P +MA E L Y D++S+G+ + E+V+ PY A++++K+ G +
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYR 259
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 22 GIEVAWSRV-------KIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKT 74
GI VA RV + ++L +++ E+ LL N++ +V ++
Sbjct: 46 GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPA 105
Query: 75 VN---MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
++ ++TEL + + + + + I+ + IL GL LH ++HRDL
Sbjct: 106 MHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE--AGVVHRDLHPG 163
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARS----VIGTPEFMAPELYEE--EYNELVDIYS 185
NI + N ++ I D LA ++ TA + + + APEL + + +LVD++S
Sbjct: 164 NILLADN-NDITICDFNLA---REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWS 219
Query: 186 FGMCILEM 193
G + EM
Sbjct: 220 AGCVMAEM 227
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 22 GIEVAWSRV-------KIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKT 74
GI VA RV + ++L +++ E+ LL N++ +V ++
Sbjct: 46 GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPA 105
Query: 75 VN---MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCD 131
++ ++TEL + + + + + I+ + IL GL LH ++HRDL
Sbjct: 106 MHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE--AGVVHRDLHPG 163
Query: 132 NIFVNGNHGEVKIGDLGLAIAMQQPTARS----VIGTPEFMAPELYEE--EYNELVDIYS 185
NI + N ++ I D LA ++ TA + + + APEL + + +LVD++S
Sbjct: 164 NILLADN-NDITICDFNLA---REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWS 219
Query: 186 FGMCILEM 193
G + EM
Sbjct: 220 AGCVMAEM 227
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 104 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG 163
++A + G+ YL IHRDL NI V N+ KI D GL+ + +++
Sbjct: 136 HFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY-VAKIADFGLSRGQEVYVKKTMGR 192
Query: 164 TP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 218
P +MA E L Y D++S+G+ + E+V+ PY A++++K+ G +
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYR 249
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 66/167 (39%), Gaps = 11/167 (6%)
Query: 77 MITELFTSGNLRQYRKKHKN--VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 134
+IT G+L + N VD +A G +LH+ P I L ++
Sbjct: 86 LITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVX 145
Query: 135 VNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELY----EEEYNELVDIYSFGMCI 190
++ + +I + + Q P P ++APE E+ D +SF + +
Sbjct: 146 IDED-XTARISXADVKFSFQSPGRXY---APAWVAPEALQKKPEDTNRRSADXWSFAVLL 201
Query: 191 LEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKC 237
E+VT E P+++ N K G++P ++ P + + C
Sbjct: 202 WELVTREVPFADLSNXEIGXKVALEGLRPTIPPGIS-PHVSKLXKIC 247
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 20/103 (19%)
Query: 48 EVHLLKSLKD--------DNVVKFYKSWVDDKKKT------VNMITELFTSGNLRQYRK- 92
E+ LLK +++ D VV+ +DD K + V M+ E+ L+ K
Sbjct: 77 EIKLLKCVRESDPSDPNKDMVVQL----IDDFKISGMNGIHVCMVFEVLGHHLLKWIIKS 132
Query: 93 KHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV 135
++ + ++ +K+ RQ+L GL YLHS IIH D+K +NI +
Sbjct: 133 NYQGLPVRCVKSIIRQVLQGLDYLHS-KCKIIHTDIKPENILM 174
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 125 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV---IGTPEFMAPELYEEEYNEL- 180
HRD+K +NI V+ + + D G+A A + +GT + APE + E +
Sbjct: 157 HRDVKPENILVSADDFAYLV-DFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 181 VDIYSFGMCILEMVTFEYPY 200
DIY+ + E +T PY
Sbjct: 216 ADIYALTCVLYECLTGSPPY 235
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 48 EVHLLKSLKD----DNVVKFYKSWVDDKKKT------VNMITELFTSGNLRQYRK-KHKN 96
E+ LLKS+++ D + +DD K + + M+ E+ L+ K ++
Sbjct: 83 EIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG 142
Query: 97 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
+ + +K +Q+L GL YLH+ IIH D+K +NI ++ N ++
Sbjct: 143 LPLPCVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIR 188
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 20/111 (18%)
Query: 48 EVHLLKSLKDDN--------VVKFYKSWVDDKKKT------VNMITELFTSGNLRQYRK- 92
E+ LLKS+++ + VV+ +DD K + + M+ E+ L+ K
Sbjct: 67 EIRLLKSVRNSDPNDPNREMVVQL----LDDFKISGVNGTHICMVFEVLGHHLLKWIIKS 122
Query: 93 KHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 143
++ + + +K +Q+L GL YLH+ IIH D+K +NI ++ N ++
Sbjct: 123 NYQGLPLPCVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIR 172
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN-GNHGE-VKIGDLGLA 150
+ +K + A Q++ + Y+HS N IHRD+K DN + G G V I D GLA
Sbjct: 100 RKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN-GNHGE-VKIGDLGLA 150
+ +K + A Q++ + Y+HS N IHRD+K DN + G G V I D GLA
Sbjct: 100 RKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN-GNHGE-VKIGDLGLA 150
+ +K + A Q++ + Y+HS N IHRD+K DN + G G V I D GLA
Sbjct: 98 RKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 36 LQLPGDLQKLYSEVHLLKSLK---DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRK 92
+Q P + + Y L++ LK +KFY + + ++ EL++ G L
Sbjct: 102 VQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV--LVGELYSYGTLLNAIN 159
Query: 93 KHKNVDIKV-----IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 138
+KN KV + ++A ++L+ + H+ IIH D+K DN F+ GN
Sbjct: 160 LYKNTPEKVMPQGLVISFAMRMLYMIE--QVHDCEIIHGDIKPDN-FILGN 207
>pdb|3PPV|A Chain A, Crystal Structure Of An Engineered Vwf A2 Domain (N1493c
And C1670s)
Length = 196
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 162 IGTPEFMAPELYEEEYNELVDIY--SFGMCILE---MVTFEYPYSECKNPAQIFKKV 213
IG +F + + EE + +D+ S + +L+ MVT EYP+SE ++ I ++V
Sbjct: 23 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPFSEAQSKGDILQRV 79
>pdb|3PPX|A Chain A, Crystal Structure Of The N1602a Mutant Of An Engineered
Vwf A2 Domain (N1493c And C1670s)
Length = 196
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 162 IGTPEFMAPELYEEEYNELVDIY--SFGMCILE---MVTFEYPYSECKNPAQIFKKV 213
IG +F + + EE + +D+ S + +L+ MVT EYP+SE ++ I ++V
Sbjct: 23 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPFSEAQSKGDILQRV 79
>pdb|3PPY|A Chain A, Crystal Structure Of The D1596aN1602A DOUBLE MUTANT OF AN
ENGINEERED Vwf A2 Domain (N1493c And C1670s)
Length = 196
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 162 IGTPEFMAPELYEEEYNELVDIY--SFGMCILE---MVTFEYPYSECKNPAQIFKKV 213
IG +F + + EE + +D+ S + +L+ MVT EYP+SE ++ I ++V
Sbjct: 23 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPFSEAQSKGDILQRV 79
>pdb|3PPW|A Chain A, Crystal Structure Of The D1596a Mutant Of An Engineered
Vwf A2 Domain (N1493c And C1670s)
Length = 196
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 162 IGTPEFMAPELYEEEYNELVDIY--SFGMCILE---MVTFEYPYSECKNPAQIFKKV 213
IG +F + + EE + +D+ S + +L+ MVT EYP+SE ++ I ++V
Sbjct: 23 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPFSEAQSKGDILQRV 79
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 95 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN-GNHG-EVKIGDLGLA 150
+ + +K + A Q+++ + ++HS + +HRD+K DN + G +V I D GLA
Sbjct: 98 RKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153
>pdb|3GXB|A Chain A, Crystal Structure Of Vwf A2 Domain
pdb|3GXB|B Chain B, Crystal Structure Of Vwf A2 Domain
Length = 184
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 162 IGTPEFMAPELYEEEYNELVDIY--SFGMCILE---MVTFEYPYSECKNPAQIFKKV 213
IG +F + + EE + +D+ S + +L+ MVT EYP+SE ++ I ++V
Sbjct: 15 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPFSEAQSKGDILQRV 71
>pdb|4G68|C Chain C, Biochemical And Structural Insights Into Xylan Utilization
By The Thermophilic Bacteriumcaldanaerobius
Polysaccharolyticus
Length = 432
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 391 IDYLIMKLLPGWK-PSYDYSSSGALSFYSVSPILGNGKTSTPSPWD 435
+DYLI LP WK + D S L ++ I+ N K S P+ WD
Sbjct: 349 MDYLIATGLPAWKYDNIDQSKVDPLEIQIMNNIVANAKGSVPA-WD 393
>pdb|4G68|A Chain A, Biochemical And Structural Insights Into Xylan Utilization
By The Thermophilic Bacteriumcaldanaerobius
Polysaccharolyticus
Length = 456
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 391 IDYLIMKLLPGWK-PSYDYSSSGALSFYSVSPILGNGKTSTPSPWD 435
+DYLI LP WK + D S L ++ I+ N K S P+ WD
Sbjct: 373 MDYLIATGLPAWKYDNIDQSKVDPLEIQIMNNIVANAKGSVPA-WD 417
>pdb|4G68|B Chain B, Biochemical And Structural Insights Into Xylan Utilization
By The Thermophilic Bacteriumcaldanaerobius
Polysaccharolyticus
Length = 432
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 391 IDYLIMKLLPGWK-PSYDYSSSGALSFYSVSPILGNGKTSTPSPWD 435
+DYLI LP WK + D S L ++ I+ N K S P+ WD
Sbjct: 349 MDYLIATGLPAWKYDNIDQSKVDPLEIQIMNNIVANAKGSVPA-WD 393
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,222,851
Number of Sequences: 62578
Number of extensions: 817001
Number of successful extensions: 4198
Number of sequences better than 100.0: 980
Number of HSP's better than 100.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 781
Number of HSP's that attempted gapping in prelim test: 2692
Number of HSP's gapped (non-prelim): 1041
length of query: 639
length of database: 14,973,337
effective HSP length: 105
effective length of query: 534
effective length of database: 8,402,647
effective search space: 4487013498
effective search space used: 4487013498
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)