Query         006600
Match_columns 639
No_of_seqs    387 out of 2671
Neff          8.4 
Searched_HMMs 13730
Date          Mon Mar 25 03:55:46 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006600.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006600hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1v6ca_ c.41.1.1 (A:) Alkaline 100.0 4.1E-48   3E-52  419.8  21.9  342   69-505    57-433 (435)
  2 d1r6va_ c.41.1.1 (A:) Fervidol 100.0 2.2E-46 1.6E-50  424.6  21.4  241   70-490   193-441 (671)
  3 d1dbia_ c.41.1.1 (A:) Thermost 100.0   7E-45 5.1E-49  370.7  22.7  242    1-487    38-279 (280)
  4 d1thma_ c.41.1.1 (A:) Thermita 100.0 3.2E-44 2.3E-48  365.9  23.1  242    1-487    37-278 (279)
  5 d1r0re_ c.41.1.1 (E:) Subtilis 100.0 2.4E-44 1.7E-48  365.9  20.7  215   70-487    56-274 (274)
  6 d1to2e_ c.41.1.1 (E:) Subtilis 100.0 7.6E-44 5.5E-48  363.5  21.5  213   73-488    60-276 (281)
  7 d1gcia_ c.41.1.1 (A:) Subtilis 100.0 1.2E-43 8.9E-48  359.6  22.6  215   70-487    55-269 (269)
  8 d2ixta1 c.41.1.1 (A:1-309) Sph 100.0 2.5E-39 1.8E-43  334.3  27.0  270    1-482    33-309 (309)
  9 d2pwaa1 c.41.1.1 (A:1-279) Pro 100.0 5.6E-39 4.1E-43  326.9  19.4  202   70-482    62-271 (279)
 10 d1wmda2 c.41.1.1 (A:1-318) Alk 100.0 1.3E-37 9.4E-42  322.6  23.2  280    1-487    29-317 (318)
 11 d1p8ja2 c.41.1.1 (A:109-442) F 100.0 9.7E-35   7E-39  302.8  16.9  233   70-487    79-328 (334)
 12 d2id4a2 c.41.1.1 (A:122-460) K 100.0 1.9E-34 1.4E-38  301.3  18.5  237   70-487    85-333 (339)
 13 d1t1ga_ c.41.1.2 (A:) Serine-c  99.9 3.3E-28 2.4E-32  255.0  -1.2  123   73-204    60-194 (357)
 14 d1ga6a_ c.41.1.2 (A:) Serine-c  99.9 1.4E-25   1E-29  236.5   8.7  124   73-205    66-205 (369)
 15 d1de4c2 c.8.4.1 (C:190-382) Tr  96.6 0.00094 6.9E-08   60.2   5.4   66  266-333    59-161 (193)
 16 d1w8oa1 b.1.18.2 (A:403-505) S  96.5   0.021 1.5E-06   45.9  12.7   89  534-627     6-96  (103)
 17 d3bi1a2 c.8.4.1 (A:118-350) Gl  94.8    0.01 7.4E-07   54.9   4.5   39  265-305    76-114 (233)
 18 d1grwa_ b.1.11.2 (A:) Major sp  68.8     9.6  0.0007   30.5   8.4   53  545-600    22-74  (124)
 19 d1rowa_ b.1.11.2 (A:) SSP-19 {  66.5      14   0.001   28.7   8.6   48  550-600    17-64  (107)
 20 d1m1sa_ b.1.11.2 (A:) WR4 {Nem  66.3      17  0.0013   28.2   9.3   59  538-601    10-68  (109)
 21 d1ex0a2 b.1.5.1 (A:516-627) Tr  58.4      18  0.0013   28.2   8.0   56  545-601    15-77  (112)
 22 d1v6ca_ c.41.1.1 (A:) Alkaline  46.9     4.4 0.00032   40.2   2.8   32  352-391   181-212 (435)
 23 d1g0da2 b.1.5.1 (A:472-583) Tr  45.4      29  0.0021   26.9   7.2   56  545-601    14-76  (112)
 24 d1vjja2 b.1.5.1 (A:479-593) Tr  45.4      38  0.0028   26.3   8.0   56  545-601    17-79  (115)
 25 d1wica_ b.1.11.2 (A:) MSP doma  45.4      28   0.002   28.7   7.5   52  547-601    36-87  (152)
 26 d1exha_ b.2.2.1 (A:) Exo-1,4-b  42.0      58  0.0042   25.0   8.5   32  546-577    19-51  (110)
 27 d2q3za2 b.1.5.1 (A:472-585) Tr  34.6      70  0.0051   24.5   8.0   56  545-601    15-78  (114)
 28 d2j2za1 b.1.11.1 (A:1-124) Pil  34.2      97  0.0071   24.0  13.0   53  546-600    14-73  (124)
 29 d2co7b1 b.1.11.1 (B:8-135) Per  32.9   1E+02  0.0076   24.0  13.8   69  535-606    10-81  (128)
 30 d1k78a2 a.4.1.5 (A:82-142) Pax  31.8      29  0.0021   23.7   4.2   33  418-450     9-41  (61)
 31 d1ejxb_ b.85.3.1 (B:) Urease,   31.1      33  0.0024   25.9   4.9   17  546-562    18-34  (101)
 32 d3bwuc1 b.1.11.1 (C:1-121) Per  29.8      91  0.0067   24.1   8.0   52  546-599    14-70  (121)
 33 d1p5va1 b.1.11.1 (A:7-147) Cha  28.1 1.4E+02  0.0099   23.7  13.3   60  546-606    20-84  (141)
 34 d4ubpb_ b.85.3.1 (B:) Urease,   26.2      36  0.0026   26.7   4.4   17  546-562    20-36  (122)
 35 d2vzsa2 b.1.4.1 (A:778-899) Ex  25.8 1.4E+02    0.01   23.2  10.4   54  545-601    37-98  (122)
 36 d1mzga_ d.224.1.1 (A:) SufE (Y  25.8      24  0.0017   28.9   3.6   36  409-445    63-98  (144)
 37 d2dpka1 b.1.27.1 (A:370-502) S  25.7   1E+02  0.0075   23.9   7.8   61  536-599     9-76  (133)
 38 d3es6b1 b.1.18.23 (B:1-118) Pr  23.9      87  0.0063   24.1   6.7   67  530-599     8-75  (118)
 39 d2cj3a1 b.6.1.1 (A:1-105) Plas  23.9      28  0.0021   26.2   3.6   32  562-595     1-32  (105)
 40 d6paxa2 a.4.1.5 (A:69-133) Pax  23.4      50  0.0036   22.7   4.2   34  418-451     7-40  (65)
 41 d1ojxa_ c.1.10.1 (A:) Archaeal  22.8      91  0.0066   27.5   7.5   23  282-304   209-231 (251)
 42 d2fwua1 b.1.27.1 (A:501-657) S  21.1 1.7E+02   0.012   23.4   8.4   62  536-599     9-76  (157)
 43 d2q5ba1 b.6.1.1 (A:1-105) Plas  20.7      36  0.0026   25.5   3.6   32  562-595     1-32  (105)
 44 d1ni7a_ d.224.1.1 (A:) Hypothe  20.3      35  0.0026   27.9   3.6   33  412-445    78-110 (149)

No 1  
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]}
Probab=100.00  E-value=4.1e-48  Score=419.84  Aligned_cols=342  Identities=20%  Similarity=0.236  Sum_probs=215.0

Q ss_pred             CCCCCCCCCchhhHHhhccCCCCCCccccccCccceeecC--CCeEEEEEeecCCCCCCHHHHHHHHHHHHh-CCCcEEE
Q 006600           69 LSPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAP--LAWLAIYKICWAPGGCSSADLLAAFDDATF-DGVDVIS  145 (639)
Q Consensus        69 ~~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP--~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~-~g~dVIn  145 (639)
                      .+|.|++||||||||||||+..         +..+.||||  +++|+.+|++.....+...++++||+++++ .|++|||
T Consensus        57 ~~~~d~~gHGThvAgiiag~~~---------~~g~~GvAp~~~~~l~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~vin  127 (435)
T d1v6ca_          57 YQPGNNNAHGTHVAGTIAAIAN---------NEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVT  127 (435)
T ss_dssp             TCCCSSCCHHHHHHHHHHCCCS---------SSBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCCCCCcHHHHHHHHhccCC---------CCceEEEecccCceeeeeecccccccchhhhhhhHHHHHhhcccceEEe
Confidence            4678899999999999999862         234689999  899999999987666677889999999986 5999999


Q ss_pred             EccCCCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEE--Ee
Q 006600          146 LSLGSSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTV--VG  223 (639)
Q Consensus       146 ~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~--~g  223 (639)
                      +|||...     ....+..+++++.++|+++|+||||+|+...+.++.++++|+|||++.+.....+-..+....+  .|
T Consensus       128 ~S~g~~~-----~~~~~~~a~~~~~~~g~~~v~aaGN~g~~~~~~p~~~~~vi~Vga~~~~~~~~~~s~~g~~vdv~apG  202 (435)
T d1v6ca_         128 MSLGGSG-----STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPG  202 (435)
T ss_dssp             ECCCBSC-----CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCSSEEEEEEC
T ss_pred             cccCCCC-----CCHHHHhhhhhccccceEEEEeccCCCCCCcccCccCCCceEEEEecCCCCcccccCCCCceEEeecc
Confidence            9999874     3455677888899999999999999998888888889999999998766543221111111111  01


Q ss_pred             EEeecCcCCCCceeee-EEccccccCC-C---CccccC------------------ccC--CCCCCCccccccEEEEEeC
Q 006600          224 QAFYNGKEDLNKFYPI-VIGKDIATFD-A---DEGSAR------------------SCE--SGTLNATLVRGKIVICFQS  278 (639)
Q Consensus       224 ~~~~~~~~~~~~~~pl-~~~~~~~~~~-~---~~~~~~------------------~c~--~~~~~~~~~~gkivl~~~~  278 (639)
                      ..+..........+.. .......... .   ......                  .|.  .......++.+++.++.+.
T Consensus       203 ~~i~st~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (435)
T d1v6ca_         203 EAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERV  282 (435)
T ss_dssp             SSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEECSSSEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEECC
T ss_pred             cceeeeeecCCCcccccccCCceeeccccccccccccccccccccceeccccceEEEEecCCceeeccccccccceeecc
Confidence            1110000000000000 0000000000 0   000000                  000  0112223445555555542


Q ss_pred             C---CcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCC
Q 006600          279 Q---FQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISP  355 (639)
Q Consensus       279 ~---g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~  355 (639)
                      .   .......+.......++.+++.++                                                    
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------  310 (435)
T d1v6ca_         283 GNQGSSYPEINSTKACKTAGAKGIIVYS----------------------------------------------------  310 (435)
T ss_dssp             SCSSSSCTHHHHHHHHHHTTCSEEEEEC----------------------------------------------------
T ss_pred             CCccccceeeeeceeecccCCcceEEec----------------------------------------------------
Confidence            1   123344444445555555444332                                                    


Q ss_pred             eeecccCCCCCCCC--CCCcCCceEcCCCcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhh
Q 006600          356 EVAFFSSRGPSSLS--PSVLKPDIAAPGVNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAI  433 (639)
Q Consensus       356 ~~a~fSS~Gp~~~~--~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~  433 (639)
                           ++.+|....  ....||||.+||..|.++......................|..|||||||||||||++|||||+
T Consensus       311 -----~~~~~~~~~~~~~~~~~di~aPg~~i~~a~g~~~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~  385 (435)
T d1v6ca_         311 -----NSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYYNGTSMATPHVSGVATLVWSY  385 (435)
T ss_dssp             -----CSSSCSCCCCEEECTTCCCCSCEEEECHHHHHHHGGGTTSEEEEEEEEEESEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCCCCcCCccccccCCceEEEEEEeccccccccccccCCcceecCCCCCCeeEEccHHHHHHHHHHHHHHHHHH
Confidence                 333333211  2457999999999887653211000000000000000467999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCCCCCCCCCCCCcCCcCCCCeeeeCcccchhhhhhc
Q 006600          434 HPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQADPFDYGGGHVDPNKAMDPGLVYDMEVSDYVRFLCA  505 (639)
Q Consensus       434 ~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~~~~~~~l~~  505 (639)
                      ||+|+++|||++||+||+++.             ..+++++||+|+||+.+|++           ||...|.
T Consensus       386 ~P~~s~~~vk~~L~~TA~~~~-------------~~~~~~~~G~G~vn~~~A~~-----------~l~~~~~  433 (435)
T d1v6ca_         386 HPECSASQVRAALNATADDLS-------------VAGRDNQTGYGMINAVAAKA-----------YLDESCT  433 (435)
T ss_dssp             CTTSCHHHHHHHHHHHSBCCS-------------SSSCBTTTBTCBCCHHHHHH-----------HHHHCTT
T ss_pred             CCCCCHHHHHHHHHhhCcccC-------------CCCCCCCcccceecHHHHHH-----------HHHhcCC
Confidence            999999999999999999652             34567799999999999964           7777664


No 2  
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]}
Probab=100.00  E-value=2.2e-46  Score=424.62  Aligned_cols=241  Identities=27%  Similarity=0.220  Sum_probs=192.3

Q ss_pred             CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCC------CCCCHHHHHHHHHHHHhCCCcE
Q 006600           70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAP------GGCSSADLLAAFDDATFDGVDV  143 (639)
Q Consensus        70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~------~~~~~~~i~~ai~~a~~~g~dV  143 (639)
                      ++.|..||||||||||||+..         +..+.||||+|+|+++|++.+.      +....+.+++||+||+++|++|
T Consensus       193 ~~~d~~gHGT~VAGiiaa~~~---------~~g~~GvAp~a~l~~~rv~~~~~~~~~~g~~~~~~i~~ai~~a~~~g~~V  263 (671)
T d1r6va_         193 DSSYGGSAGTHVAGTIAAKKD---------GKGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKV  263 (671)
T ss_dssp             BCCTTCSHHHHHHHHHHCCCS---------SSSCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSE
T ss_pred             cCcccCCCCccccceeeeecc---------ccceeeecCcceEEEEEecccccccCCCCcccHHHHHHHHHHHHhCCCcE
Confidence            466788999999999999752         2346899999999999999642      4567788999999999999999


Q ss_pred             EEEccCCCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCC-CcccCCCCcEEEEEeeccCCccceEEEeCCceEEE
Q 006600          144 ISLSLGSSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYP-QTVINTAPWVITVAASTIDRAFPTAITMGNNQTVV  222 (639)
Q Consensus       144 In~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~  222 (639)
                      ||||||+..     ....+..+++.+.++|+++|+||||++... ...+...|++|+|||++...               
T Consensus       264 in~S~g~~~-----~~~~~~~ai~~a~~~gv~vV~aAGN~~~~~~~~~Pa~~~~vi~Vga~~~~~---------------  323 (671)
T d1r6va_         264 MNHSWGGWG-----YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYG---------------  323 (671)
T ss_dssp             EEECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEET---------------
T ss_pred             Eeccccccc-----CChHHHHHHHHHHhccCcEEEEEecCCCCccccCCccCCceEEEEEecCCC---------------
Confidence            999999873     446778888999999999999999998653 44566779999999864321               


Q ss_pred             eEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEe
Q 006600          223 GQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFA  302 (639)
Q Consensus       223 g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~  302 (639)
                                                                                                      
T Consensus       324 --------------------------------------------------------------------------------  323 (671)
T d1r6va_         324 --------------------------------------------------------------------------------  323 (671)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCC
Q 006600          303 KFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGV  382 (639)
Q Consensus       303 ~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~  382 (639)
                                                                        ....++.||+|||.+        ||+|||+
T Consensus       324 --------------------------------------------------~~~~~a~fS~~g~~~--------dv~APG~  345 (671)
T d1r6va_         324 --------------------------------------------------GTFRVAGFSSRSDGV--------SVGAPGV  345 (671)
T ss_dssp             --------------------------------------------------TEEEECSSSCCCTTE--------EEEEECS
T ss_pred             --------------------------------------------------CcceeeeccCCCCCc--------eEEecCC
Confidence                                                              012678999999987        9999999


Q ss_pred             cEEeccCCCCCCccCCCC-CCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCcccc
Q 006600          383 NILASWSPVSNLEQTDHV-TPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIV  461 (639)
Q Consensus       383 ~I~sa~~~~~~~~~~~~~-~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~  461 (639)
                      +|+|+++........... ......++.|..++|||||||||||++|||+|++|+|++.|||++|++||++++..     
T Consensus       346 ~i~st~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VaG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~-----  420 (671)
T d1r6va_         346 TILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN-----  420 (671)
T ss_dssp             SEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS-----
T ss_pred             CeEeecCCCCccccccccccccccCCCeeeeecCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCC-----
Confidence            999998754322111100 00001157899999999999999999999999999999999999999999976432     


Q ss_pred             ccCCCCCCCCCCCCCCCCCCcCCcCCCCe
Q 006600          462 AEGAPHKQADPFDYGGGHVDPNKAMDPGL  490 (639)
Q Consensus       462 ~~~~~~~~~~~~~~G~G~id~~~A~~~~l  490 (639)
                              ..+..||||+||+.+||+..+
T Consensus       421 --------g~~~~~G~G~vna~~Av~~~~  441 (671)
T d1r6va_         421 --------GWDHDTGYGLVKLDAALQGPL  441 (671)
T ss_dssp             --------SCBTTTBTCBCCHHHHHHCCC
T ss_pred             --------CCCCCcccChhCHHHHhhCcC
Confidence                    234579999999999997543


No 3  
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]}
Probab=100.00  E-value=7e-45  Score=370.69  Aligned_cols=242  Identities=29%  Similarity=0.326  Sum_probs=196.1

Q ss_pred             CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006600            1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH   80 (639)
Q Consensus         1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH   80 (639)
                      ||||||++||+|.+                           +++.+++|...               ...+.|..+||||
T Consensus        38 iDsGi~~~h~~l~~---------------------------~~~~~~~~~~~---------------~~~~~d~~~HGT~   75 (280)
T d1dbia_          38 IDTGVDYTHPDLDG---------------------------KVIKGYDFVDN---------------DYDPMDLNNHGTH   75 (280)
T ss_dssp             EESCCCTTSTTTTT---------------------------TEEEEEETTTT---------------BSCCCCSSSHHHH
T ss_pred             EccCcCCCChhhcC---------------------------CeeecccccCC---------------CCccccccccccc
Confidence            79999999999954                           23445555432               1356788999999


Q ss_pred             hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccCCCCCCCCCccc
Q 006600           81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLGSSLPLSTYVDD  160 (639)
Q Consensus        81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~  160 (639)
                      |||+|+|...+        ...+.||||+|+|+.+|+++..+.+...++++||++++++|++|||||||...     ..+
T Consensus        76 vag~i~~~~~~--------~~~~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~a~~~g~~iin~S~g~~~-----~~~  142 (280)
T d1dbia_          76 VAGIAAAETNN--------ATGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLGCDC-----HTT  142 (280)
T ss_dssp             HHHHHHCCCSS--------SSSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCSSCC-----CCH
T ss_pred             eeEeeeccccC--------CCceeEEeccCEEEEEEEeCCCCCcCHHHHHHHHHHHHHcCCcEeeccccccc-----cch
Confidence            99999988532        33568999999999999998777889999999999999999999999999873     334


Q ss_pred             hHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCceeeeE
Q 006600          161 IISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKFYPIV  240 (639)
Q Consensus       161 ~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~pl~  240 (639)
                      ....+...+.++|+++|+||||+|......+...+++|+|||.+.+                                  
T Consensus       143 ~~~~a~~~a~~~gilvv~aaGn~g~~~~~~Pa~~~~vi~Vga~~~~----------------------------------  188 (280)
T d1dbia_         143 TLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY----------------------------------  188 (280)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT----------------------------------
T ss_pred             hHHHHHHHHHHCCEEEEEecCccCCCCccCCCCCCCEEEEeeecCC----------------------------------
Confidence            5667778899999999999999997766677778899999975322                                  


Q ss_pred             EccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccEEEE
Q 006600          241 IGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPYIQV  320 (639)
Q Consensus       241 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~~~i  320 (639)
                                                                                                      
T Consensus       189 --------------------------------------------------------------------------------  188 (280)
T d1dbia_         189 --------------------------------------------------------------------------------  188 (280)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             chhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCccCCCC
Q 006600          321 DFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQTDHV  400 (639)
Q Consensus       321 ~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~  400 (639)
                                                        +.++.||++||..        |++|||.+|++...           
T Consensus       189 ----------------------------------~~~a~~S~~g~~~--------d~~apg~~i~~~~~-----------  215 (280)
T d1dbia_         189 ----------------------------------DRLASFSNYGTWV--------DVVAPGVDIVSTIT-----------  215 (280)
T ss_dssp             ----------------------------------SCBCTTBCCSTTC--------CEEEECSSEEEEET-----------
T ss_pred             ----------------------------------CCcCCcCCCCCcc--------cccCCccceecccc-----------
Confidence                                              4778999999977        99999999999887           


Q ss_pred             CCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCCCCCCCCCCC
Q 006600          401 TPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQADPFDYGGGHV  480 (639)
Q Consensus       401 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G~i  480 (639)
                            ...|..++|||||||+|||++|||+|.  .+++.+||++|++||+++.               .+...||+|+|
T Consensus       216 ------~~~~~~~sGTS~AaP~vaG~~All~~~--~~t~~~v~~~L~~tA~~~~---------------~~~~~~G~G~l  272 (280)
T d1dbia_         216 ------GNRYAYMSGTSMASPHVAGLAALLASQ--GRNNIEIRQAIEQTADKIS---------------GTGTYFKYGRI  272 (280)
T ss_dssp             ------TTEEEEECSHHHHHHHHHHHHHHHHHT--TCCHHHHHHHHHHTSBCCT---------------TBTTTBSSEEC
T ss_pred             ------CcceeccCCccccchHHHHHHHHHhCC--CcCHHHHHHHHHHhCcCCC---------------CCCCcCCCCeE
Confidence                  578999999999999999999999995  4589999999999998652               12346999999


Q ss_pred             CcCCcCC
Q 006600          481 DPNKAMD  487 (639)
Q Consensus       481 d~~~A~~  487 (639)
                      |+++||+
T Consensus       273 n~~~Al~  279 (280)
T d1dbia_         273 NSYNAVT  279 (280)
T ss_dssp             CHHHHHT
T ss_pred             cHHHHcC
Confidence            9999986


No 4  
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]}
Probab=100.00  E-value=3.2e-44  Score=365.94  Aligned_cols=242  Identities=29%  Similarity=0.374  Sum_probs=205.6

Q ss_pred             CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006600            1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH   80 (639)
Q Consensus         1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH   80 (639)
                      ||||||++||+|.+                           +++..++|.++               ...|.|..+||||
T Consensus        37 iDsGi~~~H~~~~~---------------------------~~~~~~~~~~~---------------~~~~~d~~~HGT~   74 (279)
T d1thma_          37 VDTGVQSNHPDLAG---------------------------KVVGGWDFVDN---------------DSTPQNGNGHGTH   74 (279)
T ss_dssp             EESCCCTTCTTTTT---------------------------TEEEEEETTTT---------------BSCCCCSSSHHHH
T ss_pred             EcCCCCCCChhhcC---------------------------Ceecccccccc---------------Ccccccccccccc
Confidence            79999999999954                           34455666543               1356788999999


Q ss_pred             hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccCCCCCCCCCccc
Q 006600           81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLGSSLPLSTYVDD  160 (639)
Q Consensus        81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~  160 (639)
                      |||+|++...+        ...+.||||+|+|+.+|++...+.+...+++++|+++++.+++|+|||||...     ...
T Consensus        75 vag~i~~~~~~--------~~~~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~i~n~S~G~~~-----~~~  141 (279)
T d1thma_          75 CAGIAAAVTNN--------STGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGGTV-----GNS  141 (279)
T ss_dssp             HHHHHHCCCSS--------SSSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECCCBSS-----CCH
T ss_pred             cceeeeeccCC--------CccccccCCcceEEEEEEEecCCCCcHHHHHHHHHHHhhcCCceeccccCccc-----cch
Confidence            99999998642        23568999999999999998877888999999999999999999999999873     445


Q ss_pred             hHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCceeeeE
Q 006600          161 IISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKFYPIV  240 (639)
Q Consensus       161 ~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~pl~  240 (639)
                      ....+...+.++|+++|+|+||+|......+...+++|+|||++.+                                  
T Consensus       142 ~~~~a~~~a~~~~~~~v~aagn~g~~~~~~~~~~~~vi~Vga~~~~----------------------------------  187 (279)
T d1thma_         142 GLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN----------------------------------  187 (279)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT----------------------------------
T ss_pred             hHHHHHHHHHhcCceEEEeccccccCCCccccccccccccccccCC----------------------------------
Confidence            5677888899999999999999998877777788999999975422                                  


Q ss_pred             EccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccccccEEEE
Q 006600          241 IGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVPYIQV  320 (639)
Q Consensus       241 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip~~~i  320 (639)
                                                                                                      
T Consensus       188 --------------------------------------------------------------------------------  187 (279)
T d1thma_         188 --------------------------------------------------------------------------------  187 (279)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             chhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCccCCCC
Q 006600          321 DFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQTDHV  400 (639)
Q Consensus       321 ~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~  400 (639)
                                                        +.++.||++|+..        ||+|||..|+++.+           
T Consensus       188 ----------------------------------~~~~~~S~~G~~~--------di~Apg~~i~~~~~-----------  214 (279)
T d1thma_         188 ----------------------------------DNKSSFSTYGSWV--------DVAAPGSSIYSTYP-----------  214 (279)
T ss_dssp             ----------------------------------SCBCTTCCCCTTC--------CEEEECSSEEEEET-----------
T ss_pred             ----------------------------------CCCccccCCCceE--------EEeeeeeccccccC-----------
Confidence                                              4678999999987        99999999999987           


Q ss_pred             CCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCCCCCCCCCCC
Q 006600          401 TPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQADPFDYGGGHV  480 (639)
Q Consensus       401 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~~G~G~i  480 (639)
                            ++.|..++|||||||+|||++|||+|.+|  ++.+||++|++||+++.               .....||+|+|
T Consensus       215 ------~~~~~~~sGTS~AaP~vaG~~ALl~~~~~--s~~~i~~~L~~tA~~~~---------------g~~~~~G~G~v  271 (279)
T d1thma_         215 ------TSTYASLSGTSMATPHVAGVAGLLASQGR--SASNIRAAIENTADKIS---------------GTGTYWAKGRV  271 (279)
T ss_dssp             ------TTEEEEECSHHHHHHHHHHHHHHHHTTTC--CHHHHHHHHHHTCBCCT---------------TBTTTBSSEEC
T ss_pred             ------cccccccCCcchhhHHHHHHHHHHhcCCc--CHHHHHHHHHhhCccCC---------------CCCCcceeeeE
Confidence                  57899999999999999999999999766  78999999999998652               12346999999


Q ss_pred             CcCCcCC
Q 006600          481 DPNKAMD  487 (639)
Q Consensus       481 d~~~A~~  487 (639)
                      |+.+||+
T Consensus       272 n~~~Av~  278 (279)
T d1thma_         272 NAYKAVQ  278 (279)
T ss_dssp             CHHHHHH
T ss_pred             cHHHhhC
Confidence            9999975


No 5  
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]}
Probab=100.00  E-value=2.4e-44  Score=365.95  Aligned_cols=215  Identities=30%  Similarity=0.420  Sum_probs=182.0

Q ss_pred             CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccC
Q 006600           70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLG  149 (639)
Q Consensus        70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG  149 (639)
                      .+.|..||||||||||++...         ...+.|+||+|+|+.+|++...+....++++++++++.+++++|||+|||
T Consensus        56 ~~~d~~gHGT~vAgii~~~~~---------~~~~~gvap~a~i~~~~~~~~~~~~~~~~i~~ai~~a~~~~~~i~n~S~~  126 (274)
T d1r0re_          56 YNTDGNGHGTHVAGTVAALDN---------TTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLG  126 (274)
T ss_dssp             TTCCSSSHHHHHHHHHHCCSS---------SSBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEE
T ss_pred             CCCCccccccccccccccccc---------cccccccCCCcEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCceeccccc
Confidence            456788999999999998753         22458999999999999998767778899999999999999999999999


Q ss_pred             CCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCC----cccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEE
Q 006600          150 SSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQ----TVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQA  225 (639)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~----~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~  225 (639)
                      ...     ..........++.++++++|+||||+|....    ..+...+++|+|||++.+                   
T Consensus       127 ~~~-----~~~~~~~~~~~a~~~~~l~V~aaGN~g~~~~~~~~~~pa~~~~vi~Vga~~~~-------------------  182 (274)
T d1r0re_         127 GAS-----GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN-------------------  182 (274)
T ss_dssp             BSS-----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT-------------------
T ss_pred             ccc-----chhhhhHHHHHHhhCceEEEeeccCCCCCCCcccccccccCCCEEEEEeECCC-------------------
Confidence            874     3344566677888999999999999986532    233456889999975422                   


Q ss_pred             eecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCC
Q 006600          226 FYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFP  305 (639)
Q Consensus       226 ~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~  305 (639)
                                                                                                      
T Consensus       183 --------------------------------------------------------------------------------  182 (274)
T d1r0re_         183 --------------------------------------------------------------------------------  182 (274)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEE
Q 006600          306 TKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNIL  385 (639)
Q Consensus       306 ~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~  385 (639)
                                                                       +.++.||++|+.+        ||+|||++|+
T Consensus       183 -------------------------------------------------~~~~~~s~~g~~~--------di~APG~~i~  205 (274)
T d1r0re_         183 -------------------------------------------------SNRASFSSVGAEL--------EVMAPGAGVY  205 (274)
T ss_dssp             -------------------------------------------------SCBCTTCCCSTTE--------EEEEECSSEE
T ss_pred             -------------------------------------------------CCcccccCCCCCE--------EEEecCCCcc
Confidence                                                             4678999999855        9999999999


Q ss_pred             eccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCC
Q 006600          386 ASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGA  465 (639)
Q Consensus       386 sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~  465 (639)
                      ++.+                 .+.|..++|||||||+|||++|||+|++|+|++++||++|++||+++.           
T Consensus       206 ~~~~-----------------~~~~~~~sGTS~AaP~VaG~~All~~~~p~lt~~~i~~~L~~tA~~~~-----------  257 (274)
T d1r0re_         206 STYP-----------------TNTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG-----------  257 (274)
T ss_dssp             EEET-----------------TTEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS-----------
T ss_pred             cccC-----------------CCCeEeecCCchhHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC-----------
Confidence            9987                 578999999999999999999999999999999999999999998642           


Q ss_pred             CCCCCCCCCCCCCCCCcCCcCC
Q 006600          466 PHKQADPFDYGGGHVDPNKAMD  487 (639)
Q Consensus       466 ~~~~~~~~~~G~G~id~~~A~~  487 (639)
                           +...||+|+||+.+|++
T Consensus       258 -----~~~~~G~G~ln~~~A~~  274 (274)
T d1r0re_         258 -----SSFYYGKGLINVEAAAQ  274 (274)
T ss_dssp             -----CHHHHTTCBCCHHHHTC
T ss_pred             -----CCCceEcCeecHHHhcC
Confidence                 23479999999999986


No 6  
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]}
Probab=100.00  E-value=7.6e-44  Score=363.53  Aligned_cols=213  Identities=32%  Similarity=0.432  Sum_probs=182.7

Q ss_pred             CCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccCCCC
Q 006600           73 DAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLGSSL  152 (639)
Q Consensus        73 D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG~~~  152 (639)
                      +..+|||||||||+|...         .....||||+|+|+.+|++..++.....+++++|+|+++.+++|||+|||.. 
T Consensus        60 ~~~~HGT~vAgiiag~~~---------~~~~~giAp~a~l~~~kv~~~~~~~~~~~~~~ai~~a~~~~~~v~n~S~g~~-  129 (281)
T d1to2e_          60 DNNSHGTHVAGTVAALNN---------SIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGP-  129 (281)
T ss_dssp             CSSSHHHHHHHHHHCCSS---------SSSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBS-
T ss_pred             CcCCCCceeecccccCCC---------CCCcceeecccEEEEEEEeCCCCCcCHHHHHHHHHHHHhccccccccccCCC-
Confidence            467999999999998742         2245899999999999999876677889999999999999999999999987 


Q ss_pred             CCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCC----cccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeec
Q 006600          153 PLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQ----TVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYN  228 (639)
Q Consensus       153 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~----~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~  228 (639)
                          .....+..+++++.++|+++|+||||+|....    ..+...+++|+|||++.+                      
T Consensus       130 ----~~~~~~~~ai~~~~~~gil~V~aAGN~g~~~~~~~~~~pa~~~~vi~Vga~~~~----------------------  183 (281)
T d1to2e_         130 ----SGSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS----------------------  183 (281)
T ss_dssp             ----CCCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT----------------------
T ss_pred             ----cchHHHHHHHHHHHhcCCcceecccCcccCCCCCCccCCCCCCceEEEEeecCC----------------------
Confidence                34566788888999999999999999996532    234456889999975422                      


Q ss_pred             CcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCC
Q 006600          229 GKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKD  308 (639)
Q Consensus       229 ~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~  308 (639)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (281)
T d1to2e_         184 --------------------------------------------------------------------------------  183 (281)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEecc
Q 006600          309 VHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASW  388 (639)
Q Consensus       309 ~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~  388 (639)
                                                                    +.++.||++||.+        |++|||..|+++.
T Consensus       184 ----------------------------------------------~~~~~~S~~G~~~--------d~~apG~~i~s~~  209 (281)
T d1to2e_         184 ----------------------------------------------NQRASFSSVGPEL--------DVMAPGVSIQSTL  209 (281)
T ss_dssp             ----------------------------------------------SCBCTTCCCSTTC--------CEEEECSSEEEEE
T ss_pred             ----------------------------------------------CCCCcccCCCCCc--------cccCCCCCceeec
Confidence                                                          4678899999987        9999999999998


Q ss_pred             CCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCC
Q 006600          389 SPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHK  468 (639)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~  468 (639)
                      +                 ++.|..++|||||||+|||++|||+|++|.|++++||++|++||+++.              
T Consensus       210 ~-----------------~~~~~~~~GTS~Aap~vaG~~All~~~~p~lt~~~i~~~L~~tA~~~~--------------  258 (281)
T d1to2e_         210 P-----------------GNKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG--------------  258 (281)
T ss_dssp             T-----------------TTEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS--------------
T ss_pred             C-----------------CCeeEcccCcchhHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC--------------
Confidence            7                 578999999999999999999999999999999999999999999652              


Q ss_pred             CCCCCCCCCCCCCcCCcCCC
Q 006600          469 QADPFDYGGGHVDPNKAMDP  488 (639)
Q Consensus       469 ~~~~~~~G~G~id~~~A~~~  488 (639)
                        +...||+|+||+.+|++.
T Consensus       259 --~~~~~G~G~ld~~~A~~~  276 (281)
T d1to2e_         259 --DSFYYGKGLINVQAAAQH  276 (281)
T ss_dssp             --CHHHHTTCBCCHHHHTSS
T ss_pred             --CCCCcccCcccHHHHHhh
Confidence              123689999999999983


No 7  
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]}
Probab=100.00  E-value=1.2e-43  Score=359.64  Aligned_cols=215  Identities=32%  Similarity=0.412  Sum_probs=186.8

Q ss_pred             CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccC
Q 006600           70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLG  149 (639)
Q Consensus        70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG  149 (639)
                      .+.|..||||||||||++...         .....|+||+|+|+.+|++...+......+.++++++..+++++||+|||
T Consensus        55 ~~~d~~~HGT~vAgii~~~~~---------~~~~~giap~a~i~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~in~s~g  125 (269)
T d1gcia_          55 STQDGNGHGTHVAGTIAALNN---------SIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLG  125 (269)
T ss_dssp             SCSCSSSHHHHHHHHHHCCCS---------SSBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred             CccccchhhheecccccccCC---------CccccccCCceEEEEEEEecCCCCccHHHHHHHHHHHHhccccccccccc
Confidence            456788999999999998753         23457999999999999998877888899999999999999999999999


Q ss_pred             CCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCCcccCCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecC
Q 006600          150 SSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTVINTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNG  229 (639)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~  229 (639)
                      ...     .......+..++.++|++||+||||+|......+...|++|+||++..+                       
T Consensus       126 ~~~-----~~~~~~~a~~~a~~~gilvv~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~-----------------------  177 (269)
T d1gcia_         126 SPS-----PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN-----------------------  177 (269)
T ss_dssp             BSS-----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT-----------------------
T ss_pred             ccc-----ccchHHHHHHhhccCceEEEeccCCCCCCCccCccccCCceEEEEEccC-----------------------
Confidence            873     3345566778889999999999999998777777788999999975422                       


Q ss_pred             cCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCC
Q 006600          230 KEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDV  309 (639)
Q Consensus       230 ~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~  309 (639)
                                                                                                      
T Consensus       178 --------------------------------------------------------------------------------  177 (269)
T d1gcia_         178 --------------------------------------------------------------------------------  177 (269)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccC
Q 006600          310 HFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWS  389 (639)
Q Consensus       310 ~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~  389 (639)
                                                                   +.++.||++||..        ||+|||..+.++.+
T Consensus       178 ---------------------------------------------~~~~~~S~~G~~~--------di~Apg~~~~~~~~  204 (269)
T d1gcia_         178 ---------------------------------------------NNRASFSQYGAGL--------DIVAPGVNVQSTYP  204 (269)
T ss_dssp             ---------------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEET
T ss_pred             ---------------------------------------------CCcccccCCCCCc--------eEEEeeecceeccC
Confidence                                                         4678999999976        99999999999887


Q ss_pred             CCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCC
Q 006600          390 PVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQ  469 (639)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~  469 (639)
                                       ...|..++|||||||+|||++|||+|++|+|++++||++|++||.++.               
T Consensus       205 -----------------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~i~~~L~~tA~~~g---------------  252 (269)
T d1gcia_         205 -----------------GSTYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG---------------  252 (269)
T ss_dssp             -----------------TTEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---------------
T ss_pred             -----------------CCceEecCCcchHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC---------------
Confidence                             578999999999999999999999999999999999999999999652               


Q ss_pred             CCCCCCCCCCCCcCCcCC
Q 006600          470 ADPFDYGGGHVDPNKAMD  487 (639)
Q Consensus       470 ~~~~~~G~G~id~~~A~~  487 (639)
                       +...||+|+||+++|++
T Consensus       253 -~~~~~G~G~ln~~~Avk  269 (269)
T d1gcia_         253 -STNLYGSGLVNAEAATR  269 (269)
T ss_dssp             -CHHHHTTCBCCHHHHTC
T ss_pred             -CCCCcccCeEcHHHhcC
Confidence             12358999999999986


No 8  
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]}
Probab=100.00  E-value=2.5e-39  Score=334.27  Aligned_cols=270  Identities=29%  Similarity=0.298  Sum_probs=203.3

Q ss_pred             CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006600            1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH   80 (639)
Q Consensus         1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH   80 (639)
                      ||||||++||+|.++                           +...++|.....           .....+.|..|||||
T Consensus        33 iDsGv~~~Hp~~~~~---------------------------~~~~~~~~~~~~-----------~~~~~~~d~~gHGT~   74 (309)
T d2ixta1          33 LDTGVNTSHPDLVNN---------------------------VEQCKDFTGATT-----------PINNSCTDRNGHGTH   74 (309)
T ss_dssp             EESCCCTTCTTTTTT---------------------------EEEEEESSSSSS-----------CEETCCCCSSSHHHH
T ss_pred             EccCCCCCChhHhcc---------------------------ccccccccCCCC-----------CCCCCcccccccccc
Confidence            799999999999553                           344455654321           112345678899999


Q ss_pred             hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhC-----CCcEEEEccCCCCCCC
Q 006600           81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFD-----GVDVISLSLGSSLPLS  155 (639)
Q Consensus        81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~-----g~dVIn~SlG~~~~~~  155 (639)
                      |||||+|....       +...+.||||+|+|+.+|++...+.+..++++.+++++++.     ...|+|+||+...   
T Consensus        75 VAgiiaa~~~~-------~~~~~~GvAp~a~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~s~~~~~---  144 (309)
T d2ixta1          75 VAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTIISMSLGSSA---  144 (309)
T ss_dssp             HHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEEEECCCBSS---
T ss_pred             ccccccccccc-------cchhhhhhhhhccceeeeeecCCCCcccccccccccccccccccccccccccccccccc---
Confidence            99999987532       22346899999999999999877788899999999998874     3468999999873   


Q ss_pred             CCccchHHHHHHHhHhCCcEEEEeccCCCCCCCccc--CCCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCC
Q 006600          156 TYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQTVI--NTAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDL  233 (639)
Q Consensus       156 ~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~--~~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  233 (639)
                        .......++..+.++|+++|+||||++.......  ...+++++|++...........                    
T Consensus       145 --~~~~~~~~~~~~~~~g~~~V~aaGn~~~~~~~~~~pa~~~~~~~v~~~~~~~~~~~~~--------------------  202 (309)
T d2ixta1         145 --NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQNGTYR--------------------  202 (309)
T ss_dssp             --CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEETTEEE--------------------
T ss_pred             --cccchhccccchhcCCceEEEEeccccccCCCcCCchhhhcccccccccccccccccc--------------------
Confidence              3455667778888999999999999997655443  3457888888653221000000                    


Q ss_pred             CceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCccc
Q 006600          234 NKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSF  313 (639)
Q Consensus       234 ~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~  313 (639)
                                                                                                      
T Consensus       203 --------------------------------------------------------------------------------  202 (309)
T d2ixta1         203 --------------------------------------------------------------------------------  202 (309)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCC
Q 006600          314 GVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSN  393 (639)
Q Consensus       314 ~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~  393 (639)
                                                           .........++++|+..  ....||||+|||.+|+++.+    
T Consensus       203 -------------------------------------~~~~~~~~~~~~~~~~~--~~~~~vdi~apG~~~~s~~~----  239 (309)
T d2ixta1         203 -------------------------------------VADYSSRGYISTAGDYV--IQEGDIEISAPGSSVYSTWY----  239 (309)
T ss_dssp             -------------------------------------ECTTSCCCCTTTTTSSS--CCTTCCCEEEECSSEEEECT----
T ss_pred             -------------------------------------ccccccccccccccccc--cCCCcceeecCCCceeeecC----
Confidence                                                 00112344567777776  66789999999999999987    


Q ss_pred             CccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCCCC
Q 006600          394 LEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQADPF  473 (639)
Q Consensus       394 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~  473 (639)
                                   ...|..++|||||||+|||++|||+|++|+|++.|||++|++||++++..+..      .......+
T Consensus       240 -------------~~~~~~~sGTS~AaP~VaG~~Ali~~~~p~lt~~~v~~~L~~tA~~~~~~~~~------g~~~~~~~  300 (309)
T d2ixta1         240 -------------NGGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGY------GAAIGDDY  300 (309)
T ss_dssp             -------------TSSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBST------TCCSSSBT
T ss_pred             -------------CCcceeecCccchhHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCc------CCccCCCc
Confidence                         57899999999999999999999999999999999999999999987644321      23455667


Q ss_pred             CCCCCCCCc
Q 006600          474 DYGGGHVDP  482 (639)
Q Consensus       474 ~~G~G~id~  482 (639)
                      .+|+|++|+
T Consensus       301 ~~g~G~~~v  309 (309)
T d2ixta1         301 ASGFGFARV  309 (309)
T ss_dssp             TTBTCBCCC
T ss_pred             ccCCCEecC
Confidence            889999875


No 9  
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]}
Probab=100.00  E-value=5.6e-39  Score=326.90  Aligned_cols=202  Identities=31%  Similarity=0.357  Sum_probs=167.8

Q ss_pred             CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhC-------CCc
Q 006600           70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFD-------GVD  142 (639)
Q Consensus        70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~-------g~d  142 (639)
                      ++.|.+||||||||||+|+.              .|+||+|+|+.+|++........+.+..+++++...       +++
T Consensus        62 ~~~d~~gHGT~VAgiia~~~--------------~G~a~~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (279)
T d2pwaa1          62 SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGV  127 (279)
T ss_dssp             CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEE
T ss_pred             CcccccCccccccccccccc--------------cccCCCccccceeeecCCcccccccccchhheeccccccccccccc
Confidence            34577899999999999863              699999999999999876778888999999998764       345


Q ss_pred             EEEEccCCCCCCCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCCc-ccCCCCcEEEEEeeccCCccceEEEeCCceEE
Q 006600          143 VISLSLGSSLPLSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQT-VINTAPWVITVAASTIDRAFPTAITMGNNQTV  221 (639)
Q Consensus       143 VIn~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVgA~~~~~~~~~~~~~~~~~~~  221 (639)
                      |+|+|||...      .+.+..++.++.++|+++|+||||++..... .+...|++|+|||++.+               
T Consensus       128 i~n~s~g~~~------~~~~~~~~~~~~~~gil~V~aaGN~~~~~~~~~p~~~~~vi~VgA~~~~---------------  186 (279)
T d2pwaa1         128 VASLSLGGGY------SSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY---------------  186 (279)
T ss_dssp             EEEECCCEEC------CHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---------------
T ss_pred             ceeccCCCcc------ccccchhhhhhhhCCcEEEEeCccccccccccCCccCCceEEeeeEeec---------------
Confidence            9999999762      3567778888999999999999999865433 34567889999975422               


Q ss_pred             EeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEE
Q 006600          222 VGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIF  301 (639)
Q Consensus       222 ~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~  301 (639)
                                                                                                      
T Consensus       187 --------------------------------------------------------------------------------  186 (279)
T d2pwaa1         187 --------------------------------------------------------------------------------  186 (279)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCC
Q 006600          302 AKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPG  381 (639)
Q Consensus       302 ~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG  381 (639)
                                                                           +.++.||++||..        ||+|||
T Consensus       187 -----------------------------------------------------g~~~~~S~~G~~~--------dv~APG  205 (279)
T d2pwaa1         187 -----------------------------------------------------DRRSSFSNYGSVL--------DIFGPG  205 (279)
T ss_dssp             -----------------------------------------------------SBBCTTCCBSTTC--------CEEEEC
T ss_pred             -----------------------------------------------------CCCccccCCCCcc--------cccccc
Confidence                                                                 4778999999987        999999


Q ss_pred             CcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCcccc
Q 006600          382 VNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQSIV  461 (639)
Q Consensus       382 ~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~p~~  461 (639)
                      .+|+++++                 ++.|..++|||||||+|||++|||+|++|.++++++|. |++||++.+       
T Consensus       206 ~~i~s~~~-----------------~~~~~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~-ll~ta~~~~-------  260 (279)
T d2pwaa1         206 TDILSTWI-----------------GGSTRSISGTSMATPHVAGLAAYLMTLGKTTAASACRY-IADTANKGD-------  260 (279)
T ss_dssp             SSEEEEET-----------------TTEEEEECSHHHHHHHHHHHHHHHHHTTSCCTTTHHHH-HHHHSEESC-------
T ss_pred             cccccccc-----------------CCcccCCCcchhHHHHHHHHHHHHHHhCCCChHHHHHH-HHHhCcCCC-------
Confidence            99999987                 57899999999999999999999999999999887775 778887421       


Q ss_pred             ccCCCCCCCCCCCCCCCCCCc
Q 006600          462 AEGAPHKQADPFDYGGGHVDP  482 (639)
Q Consensus       462 ~~~~~~~~~~~~~~G~G~id~  482 (639)
                                ....|+|++|+
T Consensus       261 ----------~~~~g~g~~n~  271 (279)
T d2pwaa1         261 ----------LSNIPFGTVNL  271 (279)
T ss_dssp             ----------CBSCCTTSCCE
T ss_pred             ----------CCCCCCCChhh
Confidence                      22579999886


No 10 
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]}
Probab=100.00  E-value=1.3e-37  Score=322.56  Aligned_cols=280  Identities=26%  Similarity=0.267  Sum_probs=206.0

Q ss_pred             CccccCCCCCCCCCCCCCCCCCcccccccCCCCcCCCCCCcceEEEEEcccchhhhccCCCCCCCCcCCCCCCCCCCchh
Q 006600            1 MDTGIWPESESFKDENMGEIPPRWNGICQEGEGFNRSNCNRKIIGARWYVKGYEAEFGKLNSSDRVEFLSPRDAVGHGTH   80 (639)
Q Consensus         1 IDtGId~~Hp~F~~~~~~~~~~~~~g~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~GHGTH   80 (639)
                      ||||||++||+|....                .     ...++...+.+...                .++.|..|||||
T Consensus        29 iDsGi~~~h~~~~~~~----------------~-----~~~~~~~~~~~~~~----------------~~~~d~~gHGT~   71 (318)
T d1wmda2          29 ADTGLDTGRNDSSMHE----------------A-----FRGKITALYALGRT----------------NNANDTNGHGTH   71 (318)
T ss_dssp             EESCCTTSCSSTTSCT----------------T-----TTTCEEEEEETTTT----------------TCCCCSSSHHHH
T ss_pred             EcCCcCCCCcccccCc----------------c-----cCCcEEeecCCCCC----------------CCCCCCCCCCcc
Confidence            6999999999996531                0     23345555554322                245678999999


Q ss_pred             hHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCC--CCCHHHHHHHHHHHHhCCCcEEEEccCCCCCCCCCc
Q 006600           81 TSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPG--GCSSADLLAAFDDATFDGVDVISLSLGSSLPLSTYV  158 (639)
Q Consensus        81 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~--~~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~  158 (639)
                      |||||+|+..           ...||||+|+|+.+|++...+  ......+..+++++...+++|+|+|||.....  ..
T Consensus        72 vAgiiag~~~-----------~~~GvAp~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~g~~~~~--~~  138 (318)
T d1wmda2          72 VAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHTNSWGAAVNG--AY  138 (318)
T ss_dssp             HHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTTCSEEEECCCBCCTT--CC
T ss_pred             ceeecccccc-----------ccchhhhcccceeeeeeeecccccccchhhHHHHHHHHhcCCceeeccccccccc--cc
Confidence            9999998742           237999999999999997643  23455678899999999999999999988522  33


Q ss_pred             cchHHHHHHHhHhCCcEEEEeccCCCCCCCcccC--CCCcEEEEEeeccCCccceEEEeCCceEEEeEEeecCcCCCCce
Q 006600          159 DDIISIGSFHAVAKGISVVCSAGNSGPYPQTVIN--TAPWVITVAASTIDRAFPTAITMGNNQTVVGQAFYNGKEDLNKF  236 (639)
Q Consensus       159 ~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~--~ap~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  236 (639)
                      ......+...+.++++++|+|+||.|.....+..  ..++++++.+.........                         
T Consensus       139 ~~~~~~~~~~~~~~~~~~v~aagn~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------------------------  193 (318)
T d1wmda2         139 TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSFG-------------------------  193 (318)
T ss_dssp             CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGGC-------------------------
T ss_pred             chhHHHHHHHHhhcceeeeeeeccccccccccccccccccccceeeccCcccccc-------------------------
Confidence            4455666667789999999999999977655443  3466777765432210000                         


Q ss_pred             eeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCCCCcccccc
Q 006600          237 YPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKDVHFSFGVP  316 (639)
Q Consensus       237 ~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~~~~~~~ip  316 (639)
                                         .                                                            
T Consensus       194 -------------------~------------------------------------------------------------  194 (318)
T d1wmda2         194 -------------------S------------------------------------------------------------  194 (318)
T ss_dssp             -------------------G------------------------------------------------------------
T ss_pred             -------------------c------------------------------------------------------------
Confidence                               0                                                            


Q ss_pred             EEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCCCCCcc
Q 006600          317 YIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPVSNLEQ  396 (639)
Q Consensus       317 ~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~  396 (639)
                                                       .......+..+|++||..  ....|||+.|||.+|+++.........
T Consensus       195 ---------------------------------~~~~~~~~~~~s~~G~~~--~~~~~~~~~a~G~~i~~~~~~~~~~~~  239 (318)
T d1wmda2         195 ---------------------------------YADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSSLAPDSS  239 (318)
T ss_dssp             ---------------------------------GGSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEEEECCTTCCGGG
T ss_pred             ---------------------------------ccccccccccccccCCCc--CCCcccceeecCceEEeccccccccCc
Confidence                                             001124677899999988  788999999999999998875432221


Q ss_pred             CCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhC-----CCCCHHHHHHHHHhcCccCCcCCccccccCCCCCCCC
Q 006600          397 TDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIH-----PTWSPAAIKSAIVTTASLKDEYAQSIVAEGAPHKQAD  471 (639)
Q Consensus       397 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-----p~ls~~~vk~~L~~TA~~~~~~g~p~~~~~~~~~~~~  471 (639)
                      ...     .....|..++|||||||+|||++|||+|++     +.|++.+||++|++||+++.             ...+
T Consensus       240 ~~~-----~~~~~~~~~~GTS~AaP~VaG~~ALl~~~~p~~~~~~~~~~~i~~~l~~tA~~~~-------------~~~~  301 (318)
T d1wmda2         240 FWA-----NHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG-------------LGYP  301 (318)
T ss_dssp             SSE-----EEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS-------------SCSS
T ss_pred             ccc-----CCCcceeeccCcchhhHHHHHHHHHHHHHhHhhcCCCCCHHHHHHHHHhhCccCC-------------CCCC
Confidence            111     114678889999999999999999999975     46889999999999999652             2344


Q ss_pred             CCCCCCCCCCcCCcCC
Q 006600          472 PFDYGGGHVDPNKAMD  487 (639)
Q Consensus       472 ~~~~G~G~id~~~A~~  487 (639)
                      ...||||+||+.+||+
T Consensus       302 ~~~~G~G~ld~~~Al~  317 (318)
T d1wmda2         302 NGNQGWGRVTLDKSLN  317 (318)
T ss_dssp             CTTTTTCBCCHHHHHT
T ss_pred             CCCeeeceecHHHHhC
Confidence            5689999999999986


No 11 
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=9.7e-35  Score=302.79  Aligned_cols=233  Identities=18%  Similarity=0.143  Sum_probs=158.6

Q ss_pred             CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHh-CCCcEEEEcc
Q 006600           70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATF-DGVDVISLSL  148 (639)
Q Consensus        70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~-~g~dVIn~Sl  148 (639)
                      ...|..||||||||||+|...++        ....|+||+++|+.+|+...    ...+.+.++.++++ .+++++||||
T Consensus        79 ~~~~~~gHGT~vAgiia~~~~n~--------~~~~g~a~~a~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~n~S~  146 (334)
T d1p8ja2          79 TQMNDNRHGTRCAGEVAAVANNG--------VCGVGVAYNARIGGVRMLDG----EVTDAVEARSLGLNPNHIHIYSASW  146 (334)
T ss_dssp             CTTCTTCHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECSSS----CCCHHHHHHHHTSCTTTCCEEEECC
T ss_pred             ccccCccchhhhhhhhhhccccc--------cccccccccccccchhhccc----cccchHHHHHHHhhhcCCcEEeCCC
Confidence            44578899999999999986432        23479999999999998753    33455667777765 6899999999


Q ss_pred             CCCCCCCCCc-------cchHHHHHHHhHhCCcEEEEeccCCCCCCCcccC----CCCcEEEEEeeccCCccceEEEeCC
Q 006600          149 GSSLPLSTYV-------DDIISIGSFHAVAKGISVVCSAGNSGPYPQTVIN----TAPWVITVAASTIDRAFPTAITMGN  217 (639)
Q Consensus       149 G~~~~~~~~~-------~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~----~ap~vitVgA~~~~~~~~~~~~~~~  217 (639)
                      |.........       ......+...+.++|+++|+||||++........    ..+.+++|++....           
T Consensus       147 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvV~AaGN~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----------  215 (334)
T d1p8ja2         147 GPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF-----------  215 (334)
T ss_dssp             BSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT-----------
T ss_pred             CCCCcCcccCCccchhhHHHHHHHHHHHhcCCceEEEecCCCCccCCCCCccccccccccccccccccC-----------
Confidence            9865221111       1112233445568899999999998754332221    23445555543221           


Q ss_pred             ceEEEeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCce
Q 006600          218 NQTVVGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGV  297 (639)
Q Consensus       218 ~~~~~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~  297 (639)
                                                                                                      
T Consensus       216 --------------------------------------------------------------------------------  215 (334)
T d1p8ja2         216 --------------------------------------------------------------------------------  215 (334)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCce
Q 006600          298 GLIFAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDI  377 (639)
Q Consensus       298 g~i~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI  377 (639)
                                                                               +..+.||++|+..      ...+
T Consensus       216 ---------------------------------------------------------g~~~~~s~~~~~~------~~~~  232 (334)
T d1p8ja2         216 ---------------------------------------------------------GNVPWYSEACSST------LATT  232 (334)
T ss_dssp             ---------------------------------------------------------SCCCTTCCBCTTC------CEEE
T ss_pred             ---------------------------------------------------------CceeeecccCCcc------cccc
Confidence                                                                     3445556665544      1133


Q ss_pred             EcCCCc-----EEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCcc
Q 006600          378 AAPGVN-----ILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASL  452 (639)
Q Consensus       378 ~APG~~-----I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~  452 (639)
                      .+||..     +.+...                 ...|..++|||||||+|||++|||+|++|+|++.|||++|++||.+
T Consensus       233 ~~~~~~~~~~~~~~~~~-----------------~~~~~~~sGTS~AaP~VaG~aALl~s~~p~lt~~~v~~~L~~TA~~  295 (334)
T d1p8ja2         233 YSSGNQNEKQIVTTDLR-----------------QKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKP  295 (334)
T ss_dssp             ECCCSTTSCCEEEEETT-----------------TEEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBC
T ss_pred             ccccccccccccccccC-----------------CccccCCCCccccchHHHHHHHHHHHhCCCCCHHHHHHHHHHhCcc
Confidence            344322     222222                 4778899999999999999999999999999999999999999998


Q ss_pred             CCcCCccccccCCCCCCCCCCCCCCCCCCcCCcCC
Q 006600          453 KDEYAQSIVAEGAPHKQADPFDYGGGHVDPNKAMD  487 (639)
Q Consensus       453 ~~~~g~p~~~~~~~~~~~~~~~~G~G~id~~~A~~  487 (639)
                      .......+...  .........||+|+||+++||+
T Consensus       296 ~~~~~~~~~~~--~~~~~~~~~~G~G~lna~~Av~  328 (334)
T d1p8ja2         296 AHLNADDWATN--GVGRKVSHSYGYGLLDAGAMVA  328 (334)
T ss_dssp             TTCCCSCCEEC--TTSCEEBTTTBTCBCCHHHHHH
T ss_pred             cCCCCcccccc--CCCcccCCCCcceEeCHHHHHH
Confidence            75444333322  1223344578999999999987


No 12 
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.9e-34  Score=301.35  Aligned_cols=237  Identities=18%  Similarity=0.109  Sum_probs=168.8

Q ss_pred             CCCCCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHhCCCcEEEEccC
Q 006600           70 SPRDAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATFDGVDVISLSLG  149 (639)
Q Consensus        70 ~~~D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIn~SlG  149 (639)
                      ...+..+|||||||+|+|....+        ....||||+|+|+.+|+..  +.....++..++.++++. .+|+|+|||
T Consensus        85 ~~~~~~~HGT~vag~iaa~~~~~--------~~~~Gvap~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~v~~~s~g  153 (339)
T d2id4a2          85 PRLSDDYHGTRCAGEIAAKKGNN--------FCGVGVGYNAKISGIRILS--GDITTEDEAASLIYGLDV-NDIYSCSWG  153 (339)
T ss_dssp             CCSTTTTHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECTT--SCCCHHHHHHHTTTTTTT-CSEEEECEE
T ss_pred             CCcccccccceeeeccccccccc--------ccccccccccccceEEEee--ccccchHHHHHHHHHHhh-CCEEeccCC
Confidence            34567899999999999875432        2358999999999999875  467778888888887765 489999999


Q ss_pred             CCCCCCCCc--c----c-hHHHHHHHhHhCCcEEEEeccCCCCCCCccc--C--CCCcEEEEEeeccCCccceEEEeCCc
Q 006600          150 SSLPLSTYV--D----D-IISIGSFHAVAKGISVVCSAGNSGPYPQTVI--N--TAPWVITVAASTIDRAFPTAITMGNN  218 (639)
Q Consensus       150 ~~~~~~~~~--~----~-~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~--~--~ap~vitVgA~~~~~~~~~~~~~~~~  218 (639)
                      .........  .    . ....+...+..+|+++|+||||++.......  .  ..+.+++|++++              
T Consensus       154 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~i~v~AaGN~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  219 (339)
T d2id4a2         154 PADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAID--------------  219 (339)
T ss_dssp             SCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEEC--------------
T ss_pred             CCCCcccccCccchhHHHHHHHHHHHHhcCCcEEEecccCCccCCCcccccccccccccccccccc--------------
Confidence            764221111  1    1 1223344555799999999999875432221  1  223444444322              


Q ss_pred             eEEEeEEeecCcCCCCceeeeEEccccccCCCCccccCccCCCCCCCccccccEEEEEeCCCcchHHHHHHhhhcCCceE
Q 006600          219 QTVVGQAFYNGKEDLNKFYPIVIGKDIATFDADEGSARSCESGTLNATLVRGKIVICFQSQFQRSAATAARTVLDSGGVG  298 (639)
Q Consensus       219 ~~~~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g  298 (639)
                                                                                                      
T Consensus       220 --------------------------------------------------------------------------------  219 (339)
T d2id4a2         220 --------------------------------------------------------------------------------  219 (339)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEecCCCCCCCccccccEEEEchhhHHHHHHHHHhcCCcEEEEEeceeeecccCCCeeecccCCCCCCCCCCCcCCceE
Q 006600          299 LIFAKFPTKDVHFSFGVPYIQVDFAIGTSLLTYMEANRNPIVKFSFTKTVIGQQISPEVAFFSSRGPSSLSPSVLKPDIA  378 (639)
Q Consensus       299 ~i~~~~~~~~~~~~~~ip~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~  378 (639)
                                                                            ..+..+.||++|+..    ...++..
T Consensus       220 ------------------------------------------------------~~g~~~~~s~~~~~~----~~~~~~~  241 (339)
T d2id4a2         220 ------------------------------------------------------HKDLHPPYSEGCSAV----MAVTYSS  241 (339)
T ss_dssp             ------------------------------------------------------TTSCCCTTCCCCTTE----EEEEECS
T ss_pred             ------------------------------------------------------ccccccccccccCcc----ceeeeee
Confidence                                                                  123556677777643    3456778


Q ss_pred             cCCCcEEeccCCCCCCccCCCCCCCccCCCceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccCCcCCc
Q 006600          379 APGVNILASWSPVSNLEQTDHVTPNYIPQFNFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSAIVTTASLKDEYAQ  458 (639)
Q Consensus       379 APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~~~~~~g~  458 (639)
                      +||..|.++...                +..|..++|||||||||||++|||+|++|+|++.|||.+|+.||.+++....
T Consensus       242 ~~g~~~~s~~~~----------------~~~~~~~sGTS~AtP~vaG~aALv~~~~P~lt~~~i~~~l~~tA~~~~~~~~  305 (339)
T d2id4a2         242 GSGEYIHSSDIN----------------GRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNAD  305 (339)
T ss_dssp             BTTBCEEEECST----------------TCEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGG
T ss_pred             ccccccceeccC----------------CCccccCCCCcchHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccCCCCC
Confidence            899999887653                4678999999999999999999999999999999999999999998754322


Q ss_pred             cc-cccCCCCCCCCCCCCCCCCCCcCCcCC
Q 006600          459 SI-VAEGAPHKQADPFDYGGGHVDPNKAMD  487 (639)
Q Consensus       459 p~-~~~~~~~~~~~~~~~G~G~id~~~A~~  487 (639)
                      .. .+.  .........||||+||+.+||+
T Consensus       306 ~~~~~~--~~~~~~~~~~G~G~ln~~~Av~  333 (339)
T d2id4a2         306 GDWRDS--AMGKKYSHRYGFGKIDAHKLIE  333 (339)
T ss_dssp             GCCEEC--SSSSEEBTTTBTCBCCHHHHHH
T ss_pred             cccccc--CCCCCcCCCccchhhCHHHHHH
Confidence            11 111  1223345579999999999987


No 13 
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]}
Probab=99.93  E-value=3.3e-28  Score=254.99  Aligned_cols=123  Identities=21%  Similarity=0.232  Sum_probs=82.1

Q ss_pred             CCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHH---hCCCcEEEEccC
Q 006600           73 DAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDAT---FDGVDVISLSLG  149 (639)
Q Consensus        73 D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~---~~g~dVIn~SlG  149 (639)
                      |.++|+|||+|++++...+.    ..+...+.||||+|+|+.+|+...     ....+.++++++   +.+++|||+|||
T Consensus        60 ~~~g~~~~~~g~~~~~~~~~----~~d~~~~~GvAp~A~i~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~Vin~S~G  130 (357)
T d1t1ga_          60 SVDGATNQPTGDPNGPDGEV----ELDIEVAGALAPGAKIAVYFAPNT-----DAGFLNAITTAVHDPTHKPSIVSISWG  130 (357)
T ss_dssp             ESTTCCCCCCSCTTSTHHHH----HHHHHHHHHHSTTSEEEEEECCSS-----HHHHHHHHHHHHHCTTTCCSEEEECCC
T ss_pred             CCCCCCCCCCCccccccccc----cCCcccceeecccCeEEEEecccC-----CCchHHHHHHHHHhhhcCCeEEecccc
Confidence            45678888888876553211    112234689999999999998754     234555666654   469999999999


Q ss_pred             CCCCCC-CCccchHHHHHHHhHhCCcEEEEeccCCCCCCCc--------ccCCCCcEEEEEeec
Q 006600          150 SSLPLS-TYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQT--------VINTAPWVITVAAST  204 (639)
Q Consensus       150 ~~~~~~-~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~--------~~~~ap~vitVgA~~  204 (639)
                      ...... ......+...+..+..+|+++|+|+||+|.....        .....+++++|++..
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vv~aagn~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~  194 (357)
T d1t1ga_         131 GPEDSWAPASIAAMNRAFLDAAALGVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTR  194 (357)
T ss_dssp             EEGGGSCHHHHHHHHHHHHHHHHHTCEEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEE
T ss_pred             cCcCccccchHHHHHHhhhhhccCCcEEEEEeccCCcccccccccccccccccCCcceeeeeec
Confidence            864110 0112345666677789999999999999854322        223457888888754


No 14 
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]}
Probab=99.91  E-value=1.4e-25  Score=236.47  Aligned_cols=124  Identities=19%  Similarity=0.137  Sum_probs=95.8

Q ss_pred             CCCCCchhhHHhhccCCCCCCccccccCccceeecCCCeEEEEEeecCCCCCCHHHHHHHHHHHHh-CCCcEEEEccCCC
Q 006600           73 DAVGHGTHTSSTAAGGMVKDASFLGLAQGLARGGAPLAWLAIYKICWAPGGCSSADLLAAFDDATF-DGVDVISLSLGSS  151 (639)
Q Consensus        73 D~~GHGTHVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~~~~~~i~~ai~~a~~-~g~dVIn~SlG~~  151 (639)
                      +..+||||+++++.+..         ....+.||||+|+|+++|++.+.+.....+++++|++|++ .+++|||+|||..
T Consensus        66 ~~~~~~~~~~~~~e~~l---------d~~~~~gvAp~a~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~Vis~S~g~~  136 (369)
T d1ga6a_          66 SNGDYSDDQQGQGEWDL---------DSQSIVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWC  136 (369)
T ss_dssp             TTSCCCBCHHHHHHHHH---------HHHHHHHHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEE
T ss_pred             CCCCCCCCCCcceeecc---------ccccccccccCceEEEEEEeCCCCCcchHHHHHHHHHHHHcCCCceeecccccc
Confidence            46789999999988653         2334689999999999999988677888899999999986 5799999999975


Q ss_pred             CC--CCCCccchHHHHHHHhHhCCcEEEEeccCCCCCCC-------------cccCCCCcEEEEEeecc
Q 006600          152 LP--LSTYVDDIISIGSFHAVAKGISVVCSAGNSGPYPQ-------------TVINTAPWVITVAASTI  205 (639)
Q Consensus       152 ~~--~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-------------~~~~~ap~vitVgA~~~  205 (639)
                      ..  ......+.+..++.++.++|++||+||||+|....             ..+...+++++|+++..
T Consensus       137 ~~~~~~~~~~~~~~~a~~~a~~~Gi~vv~AaGN~G~~~~~~~~~~~~~~~~~~~pa~~~~v~~vg~t~~  205 (369)
T d1ga6a_         137 EADANADGTLQAEDRIFATAAAQGQTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL  205 (369)
T ss_dssp             HHHHHHTTHHHHHHHHHHHHHHTTCEEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred             ccCCCcchHHHHHHHHHHHHHHCCCEEEEeCCCCcccCcCCCCCCccccccccccccCCceeeeeeecc
Confidence            31  01123355667788888999999999999985422             12234689999997653


No 15 
>d1de4c2 c.8.4.1 (C:190-382) Transferrin receptor ectodomain, apical domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.61  E-value=0.00094  Score=60.20  Aligned_cols=66  Identities=23%  Similarity=0.147  Sum_probs=53.8

Q ss_pred             ccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCCCCC---------C-------Cc------------------
Q 006600          266 TLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFPTKD---------V-------HF------------------  311 (639)
Q Consensus       266 ~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~~~~---------~-------~~------------------  311 (639)
                      .+++|||+|+++  |.+.+.+|..+|++.||.|+|+|.++.+.         .       .+                  
T Consensus        59 ~~v~GkI~l~r~--G~~~~~~Kv~~A~~~GA~gviiysDp~d~~~~~~~~~~~g~~~~~~GDPlTPg~ps~~~~~~~~~~  136 (193)
T d1de4c2          59 TPVNGSIVIVRA--GKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSR  136 (193)
T ss_dssp             SCCTTSEEEEES--CSSCHHHHHHHHHHTTCCCEEEECCTTTSCCSCTTCCCCEECCSSSSCTTSTTSCCCGGGTCCSCC
T ss_pred             cccCceEEEEeC--CCCCHHHHHHHHHHcCceEEEEecCccccCCcCcccccccccccCCCCCCCCCcccccccccCccc
Confidence            578999999999  89999999999999999999999764432         0       00                  


Q ss_pred             ---cccccEEEEchhhHHHHHHHHH
Q 006600          312 ---SFGVPYIQVDFAIGTSLLTYME  333 (639)
Q Consensus       312 ---~~~ip~~~i~~~~~~~l~~~~~  333 (639)
                         --.||+.-|+..+++.|++.+.
T Consensus       137 ~~~lP~IP~~PIS~~dA~~lL~~L~  161 (193)
T d1de4c2         137 SSGLPNIPVQTISRAAAEKLFGNME  161 (193)
T ss_dssp             CTTSCSSCEEECCHHHHHHHHTTBC
T ss_pred             cCCCCcCCeeeCCHHHHHHHHHHcC
Confidence               0237899999999999988663


No 16 
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]}
Probab=96.52  E-value=0.021  Score=45.92  Aligned_cols=89  Identities=18%  Similarity=0.222  Sum_probs=60.2

Q ss_pred             CCcCeEEecccCccEEEEEEEEEcCCCCee-EEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEee-cCCCceEEE
Q 006600          534 LNLPSITIPELKKSITVSRQVTNVSPMNSV-YTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSRL-RVQGRYSFG  611 (639)
Q Consensus       534 ln~ps~~~~~~~~~~~~~~tvtn~~~~~~t-y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~-~~~~~~~~G  611 (639)
                      +..|++.+.- ....+++.+|+|.|....+ -.++++.|+|=++...+.  .+ ++||+++++++|.++. +..+.|...
T Consensus         6 ~t~p~~~v~p-G~~~~~~vtVtN~g~~~~~~~~~~~~~P~GW~v~~~~~--~L-~pG~s~~~~~~Vt~p~~a~~G~Y~i~   81 (103)
T d1w8oa1           6 FTIPDVALEP-GQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQGSVE--PL-MPGRQAKGQVTITVPAGTTPGRYRVG   81 (103)
T ss_dssp             EECCCEEECT-TCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEEEEC--CB-CTTCEEEEEEEEECCTTCCCEEEEEE
T ss_pred             ccCcceeeCC-CCeEEEEEEEEeCCCCceeeeeEEEcCCCCccccCcce--ee-CCCCcEEEEEEEECCCCCCCceEEEE
Confidence            4456777644 4678999999999976654 567888999988865444  44 6899999999999873 344555444


Q ss_pred             EEEEEcCceEEEEeEE
Q 006600          612 NLFWEDGIHVVRIPLI  627 (639)
Q Consensus       612 ~i~~~~~~~~v~~P~~  627 (639)
                       +..+.+.......|-
T Consensus        82 -~~a~~~~~~~s~t~t   96 (103)
T d1w8oa1          82 -ATLRTSAGNASTTFT   96 (103)
T ss_dssp             -EEEEETTEEEEEEEE
T ss_pred             -EEEEeCCcceEEEEE
Confidence             444544333333333


No 17 
>d3bi1a2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.81  E-value=0.01  Score=54.95  Aligned_cols=39  Identities=23%  Similarity=0.205  Sum_probs=36.2

Q ss_pred             CccccccEEEEEeCCCcchHHHHHHhhhcCCceEEEEecCC
Q 006600          265 ATLVRGKIVICFQSQFQRSAATAARTVLDSGGVGLIFAKFP  305 (639)
Q Consensus       265 ~~~~~gkivl~~~~~g~~~~~~k~~~~~~~Ga~g~i~~~~~  305 (639)
                      ..+++|||+|+++  |.+.+.+|..+|++.||.|+|+|.++
T Consensus        76 gi~~~gkIvl~ry--G~~~~~~Kv~~A~~~GA~GviiysDP  114 (233)
T d3bi1a2          76 KINCSGKIVIARY--GKVFRGNKVKNAQLAGAKGVILYSDP  114 (233)
T ss_dssp             CCCCTTCEEEEEC--CSSCHHHHHHHHHHTTCSEEEEECCH
T ss_pred             CCcccceEEEEeC--CCCchhHHHHHHHHcCceEEEEecCh
Confidence            4589999999999  88999999999999999999999875


No 18 
>d1grwa_ b.1.11.2 (A:) Major sperm protein, MSP {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=68.81  E-value=9.6  Score=30.54  Aligned_cols=53  Identities=15%  Similarity=0.165  Sum_probs=43.1

Q ss_pred             CccEEEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEE
Q 006600          545 KKSITVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYS  600 (639)
Q Consensus       545 ~~~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~  600 (639)
                      ....+..++|+|.++....|.+....|.  ...|.|..=.+ .++++..++|+++.
T Consensus        22 ~~~~~~~l~l~N~s~~~vafKvktt~p~--~y~v~P~~G~i-~p~~~~~i~V~~~~   74 (124)
T d1grwa_          22 DDKHTYHIKVINSSARRIGYGIKTTNMK--RLGVDPPCGVL-DPKEAVLLAVSCDA   74 (124)
T ss_dssp             SSCEEEEEEEEECSSSCEEEEEEESCTT--TEEEESSEEEE-CTTCEEEEEEEECC
T ss_pred             CcEEEEEEEEECCCCCeEEEEEEeCCCc--eEEEECCCCEE-CCCCEEEEEEEEec
Confidence            3466777899999999999999998886  45567877666 67999999999975


No 19 
>d1rowa_ b.1.11.2 (A:) SSP-19 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=66.52  E-value=14  Score=28.70  Aligned_cols=48  Identities=10%  Similarity=0.093  Sum_probs=38.4

Q ss_pred             EEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEE
Q 006600          550 VSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYS  600 (639)
Q Consensus       550 ~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~  600 (639)
                      -+.+|+|.++....|.+....|.  ...|.|..=.+ .++++.++.|+...
T Consensus        17 ~~~~l~N~s~~~vafKvKtt~~~--~y~V~P~~G~i-~P~~~~~I~I~~~~   64 (107)
T d1rowa_          17 STHKLVNGGAEKIVFKIKSSNNN--EYRIAPVFGFV-DPSGSKDVVITRTA   64 (107)
T ss_dssp             EEEEEEECSSSCEEEEEEESCSS--SEEEECSEEEE-CTTEEEEEEEEECS
T ss_pred             EEEEEEcCCCCeEEEEEEcCCCC--eEEEECCEEEE-CCCCEEEEEEEeCC
Confidence            35899999999999999988776  45567887666 67999998888763


No 20 
>d1m1sa_ b.1.11.2 (A:) WR4 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=66.33  E-value=17  Score=28.18  Aligned_cols=59  Identities=14%  Similarity=0.156  Sum_probs=42.8

Q ss_pred             eEEecccCccEEEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006600          538 SITIPELKKSITVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSR  601 (639)
Q Consensus       538 s~~~~~~~~~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~  601 (639)
                      .+.+....+.  -+.+++|.++....|.+....|.  ...|.|..=.+ .++++..+.|+....
T Consensus        10 ~l~F~~~~g~--~~~~l~N~s~~~vafKiktt~~~--~y~V~P~~G~I-~P~~~~~i~I~~~~~   68 (109)
T d1m1sa_          10 TGNYPATGGN--STHNITSESDSRLAFKVKSSNNE--HYRVRPVYGFV-DAKGKSKLDINRLPG   68 (109)
T ss_dssp             EEEECTTCEE--EEEEEEECSSSEEEEEEEESCTT--TEEEECSEEEE-CTTCEEEEEEEECSC
T ss_pred             EEEeecCCCc--EEEEEECCCCCcEEEEEEcCCCC--eEEEeCCeeEE-CCCCeEEEEEEeCCC
Confidence            3444433343  35899999999999999888776  45567877666 679999999988643


No 21 
>d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
Probab=58.42  E-value=18  Score=28.24  Aligned_cols=56  Identities=20%  Similarity=0.064  Sum_probs=39.5

Q ss_pred             CccEEEEEEEEEcCCCCeeEEEEEeC-------CCCceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006600          545 KKSITVSRQVTNVSPMNSVYTARVQA-------PAGTTVRVEPSTLTFNSTRKKLKFKVTFYSR  601 (639)
Q Consensus       545 ~~~~~~~~tvtn~~~~~~ty~~~~~~-------~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~  601 (639)
                      +....++.+++|.+....+-++.+.+       -.+..++-.-.++++ ++++++++.+++...
T Consensus        15 G~df~v~i~~~N~s~~~~~v~l~l~a~~v~YtG~~~~~~~~~~~~v~L-~p~~~~~v~~~v~~~   77 (112)
T d1ex0a2          15 GKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTL-EPLSFKKEAVLIQAG   77 (112)
T ss_dssp             TCCEEEEEEEEECSSSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEE-CTTEEEEEEEEECHH
T ss_pred             CCCEEEEEEEEECCCCCEEEEEEEEEEEEEeCCcCchheEEeeEEEEE-CCCCEEEEEEEEcHH
Confidence            45789999999998777666665542       123345555556666 678999988888765


No 22 
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]}
Probab=46.91  E-value=4.4  Score=40.19  Aligned_cols=32  Identities=25%  Similarity=0.295  Sum_probs=27.1

Q ss_pred             cCCCeeecccCCCCCCCCCCCcCCceEcCCCcEEeccCCC
Q 006600          352 QISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILASWSPV  391 (639)
Q Consensus       352 ~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~  391 (639)
                      .....++.||++|+..        ||.|||.+|+|+.+..
T Consensus       181 ~~~~~~~~~s~~g~~v--------dv~apG~~i~st~~~g  212 (435)
T d1v6ca_         181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTVG  212 (435)
T ss_dssp             CTTCCBCTTSCCCSSE--------EEEEECSSEEEECSTT
T ss_pred             cCCCCcccccCCCCce--------EEeecccceeeeeecC
Confidence            3456888999999987        9999999999988753


No 23 
>d1g0da2 b.1.5.1 (A:472-583) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}
Probab=45.43  E-value=29  Score=26.88  Aligned_cols=56  Identities=13%  Similarity=0.022  Sum_probs=37.6

Q ss_pred             CccEEEEEEEEEcCCCCeeEEEEEeC-------CCCceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006600          545 KKSITVSRQVTNVSPMNSVYTARVQA-------PAGTTVRVEPSTLTFNSTRKKLKFKVTFYSR  601 (639)
Q Consensus       545 ~~~~~~~~tvtn~~~~~~ty~~~~~~-------~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~  601 (639)
                      +....+..+++|.++...+-++.+.+       -.+..++-.-.++++ ++++++++.+++...
T Consensus        14 G~Df~v~i~~~N~s~~~~~v~l~l~a~~v~YtG~~~~~~~~~~~~v~L-~p~~~~~v~~~i~y~   76 (112)
T d1g0da2          14 GTDFDVIVEVKNEGGRDAHAQLTMLAMAVTYNSLRRGECQRKTISVTV-PAHKAHKEVMRLHYD   76 (112)
T ss_dssp             TCCEEEEEEEEECSSSCEEEEEEEEEEEECTTCBCCCCCCEEEEEEEE-CTTEEEEEEEEECHH
T ss_pred             CCCEEEEEEEEECCCCCEEEEEEEEEEEEEeCCcCccceeEeeEEEEE-CCCCeEEEEEEEcHH
Confidence            45788899999998777666665542       123333333445666 678999988888754


No 24 
>d1vjja2 b.1.5.1 (A:479-593) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}
Probab=45.39  E-value=38  Score=26.28  Aligned_cols=56  Identities=13%  Similarity=0.156  Sum_probs=38.0

Q ss_pred             CccEEEEEEEEEcCCCCeeEEEEEeC-------CCCceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006600          545 KKSITVSRQVTNVSPMNSVYTARVQA-------PAGTTVRVEPSTLTFNSTRKKLKFKVTFYSR  601 (639)
Q Consensus       545 ~~~~~~~~tvtn~~~~~~ty~~~~~~-------~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~  601 (639)
                      +....+..+++|.++...+-++.+.+       -.+..++-...++++ ++++++++.+++...
T Consensus        17 G~Df~v~l~~~N~s~~~~~v~l~l~a~av~YtG~~~~~~~~~~~~v~L-~p~~~~~v~~~v~y~   79 (115)
T d1vjja2          17 GKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATMSL-DPEEEAEHPIKISYA   79 (115)
T ss_dssp             TSCEEEEEEEEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEE-CTTCEEEEEEEECHH
T ss_pred             CCCEEEEEEEEECCCCCEEEEEEEEEEEEEeCCcCchheEEeeEEEEE-CCCCeEEEEEEECHH
Confidence            45789999999999777666655442       122344444555666 578989988888754


No 25 
>d1wica_ b.1.11.2 (A:) MSP domain containing protein 2, Mospd2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=45.39  E-value=28  Score=28.66  Aligned_cols=52  Identities=21%  Similarity=0.223  Sum_probs=40.4

Q ss_pred             cEEEEEEEEEcCCCCeeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEEEEEEEe
Q 006600          547 SITVSRQVTNVSPMNSVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFKVTFYSR  601 (639)
Q Consensus       547 ~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~  601 (639)
                      ..+-.++|+|.+.....|.+....|.-  ..|.|..=.+ .++++.++.|++...
T Consensus        36 ~~~~~l~l~N~s~~~vaFKiktt~p~~--y~V~P~~G~i-~p~~~~~I~v~~~~~   87 (152)
T d1wica_          36 EKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG   87 (152)
T ss_dssp             CCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred             eEEEEEEEECCCCCeEEEEEEcCCCcc--EEEECCceEE-CCCCEEEEEEEECCC
Confidence            444558999999999999999998875  4456887666 579998888887643


No 26 
>d1exha_ b.2.2.1 (A:) Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD {Cellulomonas fimi [TaxId: 1708]}
Probab=41.99  E-value=58  Score=25.01  Aligned_cols=32  Identities=25%  Similarity=0.316  Sum_probs=25.7

Q ss_pred             ccEEEEEEEEEcCCCC-eeEEEEEeCCCCceEE
Q 006600          546 KSITVSRQVTNVSPMN-SVYTARVQAPAGTTVR  577 (639)
Q Consensus       546 ~~~~~~~tvtn~~~~~-~ty~~~~~~~~g~~v~  577 (639)
                      +-...+++|+|.+... ..++++++.|.|.++.
T Consensus        19 ~Gf~~~vtVtN~~~~~~~gW~v~~~~p~g~~i~   51 (110)
T d1exha_          19 TGFTANVTVKNTSSAPVDGWTLTFSFPSGQQVT   51 (110)
T ss_dssp             SCEEEEEEEEECSSSCEESEEEEEECSSCCEEE
T ss_pred             CCcEEEEEEEeCCCCcccCcEEEEECCCCCEEe
Confidence            4577789999999866 4599999988877663


No 27 
>d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
Probab=34.62  E-value=70  Score=24.55  Aligned_cols=56  Identities=14%  Similarity=0.051  Sum_probs=36.7

Q ss_pred             CccEEEEEEEEEcCCCCeeEEEEEeCC----CCce---EE-EecCeEEEcCCCcEEEEEEEEEEe
Q 006600          545 KKSITVSRQVTNVSPMNSVYTARVQAP----AGTT---VR-VEPSTLTFNSTRKKLKFKVTFYSR  601 (639)
Q Consensus       545 ~~~~~~~~tvtn~~~~~~ty~~~~~~~----~g~~---v~-v~p~~~~~~~~g~~~~~~v~~~~~  601 (639)
                      +....++.+++|.++...+-++.+.+-    .|+.   ++ -....+++ ++++++++.+++...
T Consensus        15 G~Df~v~~~~~N~s~~~~~v~l~l~a~~v~YtG~~~~~~~~k~~~~v~L-~p~~~~~v~~~v~y~   78 (114)
T d2q3za2          15 GSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTL-EPFSEKSVPLCILYE   78 (114)
T ss_dssp             TCCEEEEEEEEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEEE-CTTEEEEEEEEECHH
T ss_pred             CCCEEEEEEEEeCCCCCEEEEEEEEEEEEEeCCcCcceeEEecceEEEE-CCCCEEEEEEEEcHH
Confidence            457889999999987776666655421    2332   32 12234566 678999988888765


No 28 
>d2j2za1 b.1.11.1 (A:1-124) Pilus chaperone PapD, N-domain {Escherichia coli [TaxId: 562]}
Probab=34.24  E-value=97  Score=24.02  Aligned_cols=53  Identities=11%  Similarity=0.137  Sum_probs=35.5

Q ss_pred             ccEEEEEEEEEcCCCCeeEEE--EEeCCC-----CceEEEecCeEEEcCCCcEEEEEEEEEE
Q 006600          546 KSITVSRQVTNVSPMNSVYTA--RVQAPA-----GTTVRVEPSTLTFNSTRKKLKFKVTFYS  600 (639)
Q Consensus       546 ~~~~~~~tvtn~~~~~~ty~~--~~~~~~-----g~~v~v~p~~~~~~~~g~~~~~~v~~~~  600 (639)
                      +....+.+|+|.|+. ..|-+  -++...     ...+-++|.-+.+ ++|+++.++|....
T Consensus        14 ~~~~~~i~v~N~~~~-~p~LvQswv~~~~~~~~~~~~fivtPPl~rl-~p~~~~~vRI~~~~   73 (124)
T d2j2za1          14 SEKSMTLDISNDNKQ-LPYLAQAWIENENQEKIITGPVIATPPVQRL-EPGAKSMVRLSTTP   73 (124)
T ss_dssp             TSSEEEEEEEECCSS-SCEEEEEEEECTTSCEESSSSEEEECSEEEE-CTTCEEEEEEEECG
T ss_pred             CCCEEEEEEEeCCCC-ccEEEEEEEecCCCCccccCCeEECCCeEEE-CCCCcceEEEEEcC
Confidence            355677999998743 23433  333221     2237899999999 57899999988763


No 29 
>d2co7b1 b.1.11.1 (B:8-135) Periplasmic chaperone SafB {Salmonella typhimurium [TaxId: 90371]}
Probab=32.86  E-value=1e+02  Score=23.96  Aligned_cols=69  Identities=9%  Similarity=0.093  Sum_probs=43.7

Q ss_pred             CcCeEEecccCccEEEEEEEEEcCCCCeeEEEEEeC---CCCceEEEecCeEEEcCCCcEEEEEEEEEEeecCCC
Q 006600          535 NLPSITIPELKKSITVSRQVTNVSPMNSVYTARVQA---PAGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQG  606 (639)
Q Consensus       535 n~ps~~~~~~~~~~~~~~tvtn~~~~~~ty~~~~~~---~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~  606 (639)
                      +..-+.+..  +....+++|+|.++.+....+.+..   .....+-++|..+.+ ++|+++.++|.-.....+..
T Consensus        10 ~~TRvi~~~--~~~~~sv~l~N~~~~p~lvQ~~v~~~~~~~~~~fivtPPl~rl-~p~~~q~vRI~~~~~~lp~d   81 (128)
T d2co7b1          10 GATRVIYHA--GTAGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPLFRL-EANQQSQLRIVRTGGDMPTD   81 (128)
T ss_dssp             SCSEEEEET--TSSCEEEEEECCSSSCEEEEEEEEETTSSSBCSEEEESSEEEE-CTTCEEEEEEEECCCCCCSS
T ss_pred             CCeEEEEcC--CCCEEEEEEEeCCCCcEEEEEEEEcCCCCccCCEEEeCceeEE-CCCCceEEEEEecCCCCCCC
Confidence            333444433  3455668999988665555555442   224457899999999 57898998887654433443


No 30 
>d1k78a2 a.4.1.5 (A:82-142) Pax-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.76  E-value=29  Score=23.68  Aligned_cols=33  Identities=18%  Similarity=0.287  Sum_probs=30.2

Q ss_pred             chhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcC
Q 006600          418 MSCPHISGIVALLKAIHPTWSPAAIKSAIVTTA  450 (639)
Q Consensus       418 mAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA  450 (639)
                      .|+|-|---++-+++.+|.+-+-|||+.|..-.
T Consensus         9 vaTP~V~~kI~~yK~enP~iFaWEIRd~Li~eg   41 (61)
T d1k78a2           9 VATPKVVEKIAEYKRQNPTMFAWEIRDRLLAER   41 (61)
T ss_dssp             SSCHHHHHHHHHHHHHCTTCCHHHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHHHhcCCcccHHHHHHHHHHcC
Confidence            679999999999999999999999999998754


No 31 
>d1ejxb_ b.85.3.1 (B:) Urease, beta-subunit {Klebsiella aerogenes [TaxId: 28451]}
Probab=31.07  E-value=33  Score=25.93  Aligned_cols=17  Identities=18%  Similarity=-0.054  Sum_probs=13.3

Q ss_pred             ccEEEEEEEEEcCCCCe
Q 006600          546 KSITVSRQVTNVSPMNS  562 (639)
Q Consensus       546 ~~~~~~~tvtn~~~~~~  562 (639)
                      +..+++++|+|.|+.+-
T Consensus        18 gr~~~~l~V~NtGDRpI   34 (101)
T d1ejxb_          18 GRATCRVVVENHGDRPI   34 (101)
T ss_dssp             TCCEEEEEEEECSSSCE
T ss_pred             CCcEEEEEEEeCCCcce
Confidence            45788899999997653


No 32 
>d3bwuc1 b.1.11.1 (C:1-121) Periplasmic chaperone FimC {Escherichia coli [TaxId: 562]}
Probab=29.83  E-value=91  Score=24.09  Aligned_cols=52  Identities=17%  Similarity=0.160  Sum_probs=34.7

Q ss_pred             ccEEEEEEEEEcCCCCeeEEEE--Ee---CCCCceEEEecCeEEEcCCCcEEEEEEEEE
Q 006600          546 KSITVSRQVTNVSPMNSVYTAR--VQ---APAGTTVRVEPSTLTFNSTRKKLKFKVTFY  599 (639)
Q Consensus       546 ~~~~~~~tvtn~~~~~~ty~~~--~~---~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~  599 (639)
                      +....+.+++|.++. ..|-+.  ++   ......+-++|.-+.+ ++++.+.++|...
T Consensus        14 ~~~~~~~~i~N~~~~-~~~lvq~wv~~~d~~~~~~fivtPPl~rl-~p~~~q~vRI~~~   70 (121)
T d3bwuc1          14 GQKQEQLAVTNNDEN-STYLIQSWVENADGVKDGRFIVTPPLFAM-KGKKENTLRILDA   70 (121)
T ss_dssp             TCSEEEEEEEECCTT-CEEEEEEEEEETTSCCCSSEEEESSEEEE-ESSEEEEEEEEEC
T ss_pred             CCceEEEEEEECCCC-ccEEEEEEEEcCCCCcCCCeeECCCcEEe-CCCCeeEEEEEec
Confidence            345566888898743 234432  22   2334558899999999 5789999998764


No 33 
>d1p5va1 b.1.11.1 (A:7-147) Chaperone protein Caf1m {Yersinia pestis [TaxId: 632]}
Probab=28.06  E-value=1.4e+02  Score=23.74  Aligned_cols=60  Identities=10%  Similarity=0.167  Sum_probs=38.3

Q ss_pred             ccEEEEEEEEEcCCCCeeEEEEEeCC-----CCceEEEecCeEEEcCCCcEEEEEEEEEEeecCCC
Q 006600          546 KSITVSRQVTNVSPMNSVYTARVQAP-----AGTTVRVEPSTLTFNSTRKKLKFKVTFYSRLRVQG  606 (639)
Q Consensus       546 ~~~~~~~tvtn~~~~~~ty~~~~~~~-----~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~  606 (639)
                      +...++++|+|.++.+-...+.++..     ....+-++|..+.+ ++|+++.++|.-.....+.+
T Consensus        20 ~~~~~s~~v~N~~~~p~lvQ~wv~~~~~~~~~~~pfivtPPl~rl-~p~~~~~lRI~~~~~~lP~D   84 (141)
T d1p5va1          20 DAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAGGVFPRD   84 (141)
T ss_dssp             TCSCEEEEEEECSSSCEEEEEEECC---------CEEEESSEEEE-CTTCEEEEEEEECSCCCCSS
T ss_pred             CCcEEEEEEEeCCCCCEEEEEEEEcCCCCcCCCCCeEEcCCeEEE-CCCCceEEEEEecCCCCCCc
Confidence            34566799999986655555544421     12237789999999 57899999986543333333


No 34 
>d4ubpb_ b.85.3.1 (B:) Urease, beta-subunit {Bacillus pasteurii [TaxId: 1474]}
Probab=26.23  E-value=36  Score=26.70  Aligned_cols=17  Identities=12%  Similarity=0.016  Sum_probs=13.0

Q ss_pred             ccEEEEEEEEEcCCCCe
Q 006600          546 KSITVSRQVTNVSPMNS  562 (639)
Q Consensus       546 ~~~~~~~tvtn~~~~~~  562 (639)
                      +..+++++|+|.|+.+-
T Consensus        20 gr~~~~l~V~NtGDRpI   36 (122)
T d4ubpb_          20 GREKTTIRVSNTGDRPI   36 (122)
T ss_dssp             TSCEEEEEEEECSSSCE
T ss_pred             CCCEEEEEEEeCCCcce
Confidence            45678899999997553


No 35 
>d2vzsa2 b.1.4.1 (A:778-899) Exochitosanase CsxA, domains 2, 4 and 5 {Amycolatopsis orientalis [TaxId: 31958]}
Probab=25.82  E-value=1.4e+02  Score=23.17  Aligned_cols=54  Identities=15%  Similarity=0.189  Sum_probs=34.9

Q ss_pred             CccEEEEEEEEEcCCC---CeeEEEEEeCCCCceEEEecC-----eEEEcCCCcEEEEEEEEEEe
Q 006600          545 KKSITVSRQVTNVSPM---NSVYTARVQAPAGTTVRVEPS-----TLTFNSTRKKLKFKVTFYSR  601 (639)
Q Consensus       545 ~~~~~~~~tvtn~~~~---~~ty~~~~~~~~g~~v~v~p~-----~~~~~~~g~~~~~~v~~~~~  601 (639)
                      .+..+++.+|+|.++.   +.--++++....|-.|  .|.     =+++ =+||+++++|++...
T Consensus        37 dg~~~v~vtl~N~s~~~~pAff~rL~l~d~~g~~I--lPv~~sDNY~sL-~PGE~~~v~i~~~~~   98 (122)
T d2vzsa2          37 DGTTTTTVTLKNTSGGRLPAFYVDSKVVDSAGKPV--LPVEWNDNAVSL-WPGETTTLTAKYRTA   98 (122)
T ss_dssp             TSEEEEEEEEEECCSSSCCEEEEEEEEECTTSCBC--SSCEESSCSEEE-CTTCEEEEEEEEEGG
T ss_pred             CCcEEEEEEEEcCCCCccEEEEEEEEeEcCCCCEe--cceEeeCCeEEE-cCCCeEEEEEEeccc
Confidence            3577899999999863   2333455554455433  233     2344 379999999999854


No 36 
>d1mzga_ d.224.1.1 (A:) SufE (YhnA) {Escherichia coli [TaxId: 562]}
Probab=25.76  E-value=24  Score=28.88  Aligned_cols=36  Identities=17%  Similarity=0.235  Sum_probs=28.7

Q ss_pred             ceeeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHH
Q 006600          409 NFKVESGTSMSCPHISGIVALLKAIHPTWSPAAIKSA  445 (639)
Q Consensus       409 ~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~  445 (639)
                      ....+.|.|= |++|.|++|||.+.+-..+|++|.++
T Consensus        63 ~~~~f~~dSd-a~IvkGl~ail~~~~~g~t~~eI~~~   98 (144)
T d1mzga_          63 GIIELQGDSD-AAIVKGLIAVVFILYDQMTPQDIVNF   98 (144)
T ss_dssp             SCEEEEEEES-SHHHHHHHHHHHHHTTTCCHHHHHHC
T ss_pred             CceEEEeeCc-hHHHHHHHHHHHHHHCCCCHHHHHhc
Confidence            3444556663 48999999999999999999998753


No 37 
>d2dpka1 b.1.27.1 (A:370-502) Sodium/calcium exchanger 1 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=25.69  E-value=1e+02  Score=23.90  Aligned_cols=61  Identities=11%  Similarity=0.142  Sum_probs=29.7

Q ss_pred             cCeEEecccCccEEEEEEEEEcC-CCCeeEEEEE-----eCCCCceEEEecCeEEEcCCCc-EEEEEEEEE
Q 006600          536 LPSITIPELKKSITVSRQVTNVS-PMNSVYTARV-----QAPAGTTVRVEPSTLTFNSTRK-KLKFKVTFY  599 (639)
Q Consensus       536 ~ps~~~~~~~~~~~~~~tvtn~~-~~~~ty~~~~-----~~~~g~~v~v~p~~~~~~~~g~-~~~~~v~~~  599 (639)
                      .+++++.+-.+...  ++|...+ +.....++.+     .+..|........+|+|. +|| +++++|.+-
T Consensus         9 ~~~~tv~E~~g~v~--v~V~r~~~~~~~~v~V~~~t~~gtA~~g~Dy~~~~g~i~F~-~Ge~~~~i~V~i~   76 (133)
T d2dpka1           9 QGTYQCLENCGTVA--LTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFK-PGETQKEIRVGII   76 (133)
T ss_dssp             CSEEEEETTSSEEE--EEEEEESSCTTSCEEEEEEEEESSSCBTTTBCCCEEEEEEC-TTCCEEEEEEEBC
T ss_pred             CCEEEEecCCcEEE--EEEEEeCCCcCceEEEEEEEcCCcccccceEeccCCeEEEC-CCCeEEEEEEEEE
Confidence            34666666545444  4433233 2222222322     244566665556678885 455 445444443


No 38 
>d3es6b1 b.1.18.23 (B:1-118) Prolactin-inducible protein, PIP {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.95  E-value=87  Score=24.10  Aligned_cols=67  Identities=15%  Similarity=0.150  Sum_probs=39.9

Q ss_pred             ccccCCcCeEEecccCccEEEEEEEEEcCCCCeeEEEEEeCCCCceEEE-ecCeEEEcCCCcEEEEEEEEE
Q 006600          530 FLVNLNLPSITIPELKKSITVSRQVTNVSPMNSVYTARVQAPAGTTVRV-EPSTLTFNSTRKKLKFKVTFY  599 (639)
Q Consensus       530 ~~~~ln~ps~~~~~~~~~~~~~~tvtn~~~~~~ty~~~~~~~~g~~v~v-~p~~~~~~~~g~~~~~~v~~~  599 (639)
                      ..-+||.|.+....  ...+++.+|.|.-+....-++++.....+...- ...++.+ .++++++|...+.
T Consensus         8 ~~~~l~lP~sv~rg--e~~~i~~~V~Nyl~~~~~v~v~L~~s~~~~~~~~~~~~~cv-~~~~~~t~~w~i~   75 (118)
T d3es6b1           8 IIKNFDIPKSVRPN--DEVTAVLAVQTELKECMVVKTYLISSIPLQGAFNYKYTACL-CDDNPKTFYWDFY   75 (118)
T ss_dssp             CEECCCCCSEECSS--CCEEEEEEEEECCSSCEEEEEEEEESSCCCSGGGCEEEEEE-CSSSCEEEEEEEC
T ss_pred             EEEEcCCCceEecC--CEEEEEEEEEECccceEEEEEEEecCCCEEccCCCCcceEE-CCCCceEEEEEEE
Confidence            34578888666532  578899999999988777777765332222100 0113344 4566666655554


No 39 
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]}
Probab=23.90  E-value=28  Score=26.16  Aligned_cols=32  Identities=25%  Similarity=0.489  Sum_probs=22.3

Q ss_pred             eeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEE
Q 006600          562 SVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFK  595 (639)
Q Consensus       562 ~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~  595 (639)
                      +||+|.+....| .+..+|..|++ ++|++.+|.
T Consensus         1 eT~tV~v~~~~g-~~~F~P~~i~v-~~GdtV~f~   32 (105)
T d2cj3a1           1 ETYTVKLGSDKG-LLVFEPAKLTI-KPGDTVEFL   32 (105)
T ss_dssp             CEEEEEESCTTC-CSSEESSEEEE-CTTCEEEEE
T ss_pred             CcEEEEEEeCCC-ceEEeCCEEEE-CCCCEEEEE
Confidence            477777753333 46678999999 578977663


No 40 
>d6paxa2 a.4.1.5 (A:69-133) Pax-6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.37  E-value=50  Score=22.74  Aligned_cols=34  Identities=15%  Similarity=0.264  Sum_probs=30.5

Q ss_pred             chhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCc
Q 006600          418 MSCPHISGIVALLKAIHPTWSPAAIKSAIVTTAS  451 (639)
Q Consensus       418 mAaP~VAG~aALl~q~~p~ls~~~vk~~L~~TA~  451 (639)
                      .|+|.|-.-++-+++.+|.+=.-|||..|+.-..
T Consensus         7 vaTP~V~~kI~~yK~enP~iFaWEIRd~Li~egi   40 (65)
T d6paxa2           7 VATPEVVSKIAQYKQECPSIFAWEIRDRLLSEGV   40 (65)
T ss_dssp             SSCHHHHHHHHHHHHHCTTCCHHHHHHHHHHTTS
T ss_pred             cCCHHHHHHHHHHHHhCCccchHHHHHHHHHcCC
Confidence            5799999999999999999999999999987643


No 41 
>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase {Archaeon Thermoproteus tenax [TaxId: 2271]}
Probab=22.84  E-value=91  Score=27.53  Aligned_cols=23  Identities=17%  Similarity=0.372  Sum_probs=18.3

Q ss_pred             chHHHHHHhhhcCCceEEEEecC
Q 006600          282 RSAATAARTVLDSGGVGLIFAKF  304 (639)
Q Consensus       282 ~~~~~k~~~~~~~Ga~g~i~~~~  304 (639)
                      ..+.+..+.+.++|+.|+++-.+
T Consensus       209 ~~~l~~~~~a~~~Ga~G~~~GRn  231 (251)
T d1ojxa_         209 EDFLKQVEGVLEAGALGIAVGRN  231 (251)
T ss_dssp             HHHHHHHHHHHHTTCCEEEESHH
T ss_pred             HHHHHHHHHHHHCCCcEEeechh
Confidence            45778888899999999998543


No 42 
>d2fwua1 b.1.27.1 (A:501-657) Sodium/calcium exchanger 1 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=21.08  E-value=1.7e+02  Score=23.45  Aligned_cols=62  Identities=15%  Similarity=0.097  Sum_probs=33.7

Q ss_pred             cCeEEecccCccEEEEEEEEEcCCCCeeEEEEEe-----C-CCCceEEEecCeEEEcCCCcEEEEEEEEE
Q 006600          536 LPSITIPELKKSITVSRQVTNVSPMNSVYTARVQ-----A-PAGTTVRVEPSTLTFNSTRKKLKFKVTFY  599 (639)
Q Consensus       536 ~ps~~~~~~~~~~~~~~tvtn~~~~~~ty~~~~~-----~-~~g~~v~v~p~~~~~~~~g~~~~~~v~~~  599 (639)
                      .+++.+.+-.+  +++++|...+....+-++.++     + .+|........+|+|.+.-.+++++|.+.
T Consensus         9 ~~~~~V~E~~g--~~~v~V~R~~g~~g~v~V~~~t~~gtA~~~g~Dy~~~~g~l~F~~ge~~k~i~i~i~   76 (157)
T d2fwua1           9 EPVTHVSESIG--IMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVKTISVKVI   76 (157)
T ss_dssp             CSEEEEETTCS--EEEEEEECCTTCSSCEEEEEEEECTTSCTTTTSEECCEEEEEECSSCCCCEEEEEEC
T ss_pred             CCeEEEecCCE--EEEEEEEEeCCCCceEEEEEEEeCCCcCCcCCCcccccCcEEECCCceEEEEEeeec
Confidence            34666666444  455666655544433344332     2 24566666666888954333556666654


No 43 
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]}
Probab=20.67  E-value=36  Score=25.48  Aligned_cols=32  Identities=19%  Similarity=0.396  Sum_probs=21.7

Q ss_pred             eeEEEEEeCCCCceEEEecCeEEEcCCCcEEEEE
Q 006600          562 SVYTARVQAPAGTTVRVEPSTLTFNSTRKKLKFK  595 (639)
Q Consensus       562 ~ty~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~  595 (639)
                      +||+|++... +-.+...|+.|++ +.|++.+|.
T Consensus         1 et~tV~vg~~-~g~~~F~P~~l~v-~~GdtV~f~   32 (105)
T d2q5ba1           1 ETFTVKMGAD-SGLLQFEPANVTV-HPGDTVKWV   32 (105)
T ss_dssp             CEEEEEESCT-TSCSSEESSEEEE-CTTEEEEEE
T ss_pred             CcEEEEEecC-CCceEEeCCEEEE-CCCCEEEEE
Confidence            3566666533 3346678999999 579987763


No 44 
>d1ni7a_ d.224.1.1 (A:) Hypothetical protein YgdK {Escherichia coli [TaxId: 562]}
Probab=20.28  E-value=35  Score=27.95  Aligned_cols=33  Identities=18%  Similarity=0.157  Sum_probs=26.7

Q ss_pred             eeccccchhHHHHHHHHHHHhhCCCCCHHHHHHH
Q 006600          412 VESGTSMSCPHISGIVALLKAIHPTWSPAAIKSA  445 (639)
Q Consensus       412 ~~sGTSmAaP~VAG~aALl~q~~p~ls~~~vk~~  445 (639)
                      .+.|-|= |++|-|.+|||...+-..+|+||...
T Consensus        78 ~f~adSD-a~IvkGl~~iL~~~~sg~t~~eI~~~  110 (149)
T d1ni7a_          78 HFFGDSE-GRIVRGLLAVLLTAVEGKTAAELQAQ  110 (149)
T ss_dssp             CCEEEES-SHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred             EEEeccc-HHHHHHHHHHHHHHHCCCCHHHHHhc
Confidence            3345554 67999999999999999999998753


Done!