Query 006605
Match_columns 639
No_of_seqs 387 out of 3231
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 04:03:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006605.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006605hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 2E-79 6.9E-84 692.2 31.9 453 130-635 1-462 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 2.6E-74 8.7E-79 652.4 30.3 450 130-635 1-451 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1E-64 3.5E-69 596.3 27.7 406 142-634 8-450 (926)
4 3afg_A Subtilisin-like serine 100.0 1.6E-54 5.6E-59 481.3 27.7 316 85-636 59-396 (539)
5 2p4e_P Proprotein convertase s 100.0 1.8E-53 6.2E-58 475.3 9.1 297 85-632 108-419 (692)
6 2z2z_A TK-subtilisin precursor 100.0 1.2E-51 4E-56 443.9 16.5 299 85-636 23-371 (395)
7 3t41_A Epidermin leader peptid 100.0 1.6E-49 5.6E-54 437.8 25.8 221 85-350 65-309 (471)
8 1y9z_A Alkaline serine proteas 100.0 1.8E-49 6.2E-54 432.9 22.1 357 141-636 14-406 (441)
9 1r6v_A Subtilisin-like serine 100.0 2.3E-47 8E-52 428.8 22.6 313 86-636 53-418 (671)
10 2ixt_A 36KDA protease; serine 100.0 3.9E-45 1.3E-49 381.1 19.8 264 141-635 16-286 (310)
11 1dbi_A AK.1 serine protease; h 100.0 5.1E-45 1.7E-49 373.9 20.2 239 142-635 22-260 (280)
12 1thm_A Thermitase; hydrolase(s 100.0 1.3E-44 4.3E-49 371.0 20.5 239 142-636 22-260 (279)
13 1gci_A Subtilisin; hydrolase, 100.0 9.2E-45 3.1E-49 369.7 19.2 238 142-636 15-252 (269)
14 1r0r_E Subtilisin carlsberg; h 100.0 5E-45 1.7E-49 373.0 17.2 239 142-636 15-257 (274)
15 1to2_E Subtilisin BPN'; serine 100.0 1.5E-44 5.3E-49 370.6 17.7 240 142-636 15-258 (281)
16 1sh7_A Extracellular subtilisi 100.0 3.4E-44 1.2E-48 368.2 19.7 233 142-634 20-255 (284)
17 2x8j_A Intracellular subtilisi 100.0 6.4E-45 2.2E-49 381.2 13.1 245 142-636 32-292 (327)
18 3zxy_A Subtilisin-like protein 100.0 8.5E-45 2.9E-49 373.4 12.4 241 151-633 3-249 (282)
19 4h6x_A Thiazoline oxidase/subt 100.0 5E-46 1.7E-50 394.6 1.0 278 142-635 22-314 (357)
20 2b6n_A Proteinase K; S binding 100.0 9.3E-44 3.2E-48 364.4 16.4 234 142-633 22-258 (278)
21 2z30_A TK-subtilisin; thermoco 100.0 1.2E-43 4.1E-48 371.0 14.4 244 141-636 18-296 (320)
22 4dzt_A Aqualysin-1, aqualysin- 100.0 3.1E-43 1.1E-47 360.5 16.4 234 142-635 22-258 (276)
23 2pwa_A Proteinase K; structure 100.0 2.8E-43 9.5E-48 360.5 14.7 223 152-634 28-258 (279)
24 4h6w_A N-terminal cyanobactin 100.0 1.3E-43 4.4E-48 369.1 10.7 249 142-636 12-265 (306)
25 1wmd_A Protease; alpha-beta hy 100.0 1.1E-42 3.9E-47 378.8 17.9 267 142-635 12-296 (434)
26 2iy9_A SUBA; toxin, shiga, pla 100.0 5.4E-43 1.8E-47 370.6 14.0 251 142-636 34-309 (347)
27 3lpc_A APRB2; protease, subtil 100.0 3.5E-42 1.2E-46 363.6 14.3 278 142-635 23-316 (340)
28 3f7m_A Alkaline serine proteas 100.0 3.5E-42 1.2E-46 353.2 13.1 222 152-633 29-258 (279)
29 2qtw_B Proprotein convertase s 100.0 5E-42 1.7E-46 373.8 13.6 239 151-632 22-267 (546)
30 1p8j_A Furin precursor; prohor 100.0 5.3E-40 1.8E-44 360.9 14.3 259 142-635 29-297 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 9.8E-39 3.4E-43 353.2 13.4 156 142-349 45-205 (503)
32 2oxa_A Extracellular serine pr 100.0 3.7E-39 1.3E-43 364.5 9.7 152 151-349 66-222 (600)
33 3lxu_X Tripeptidyl-peptidase 2 100.0 3.9E-37 1.3E-41 360.0 17.2 221 232-636 267-503 (1354)
34 3hjr_A Extracellular serine pr 100.0 2E-35 6.9E-40 335.0 13.8 183 151-379 66-274 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.8 3.5E-22 1.2E-26 221.5 5.0 100 263-369 274-384 (552)
36 1ga6_A Serine-carboxyl protein 99.8 2.6E-19 9E-24 189.2 5.8 104 264-369 90-207 (372)
37 3icu_A E3 ubiquitin-protein li 98.7 7E-08 2.4E-12 91.1 9.7 85 417-508 82-176 (194)
38 3cnq_P Subtilisin BPN'; unclea 98.7 9.9E-08 3.4E-12 77.5 9.3 47 85-132 33-79 (80)
39 2w2n_P Proprotein convertase s 98.6 1.8E-07 6.3E-12 81.2 9.8 44 85-128 70-113 (114)
40 3edy_A Tripeptidyl-peptidase 1 98.5 5.8E-08 2E-12 106.9 6.5 78 289-368 285-374 (544)
41 2qtw_A Proprotein convertase s 98.5 5.5E-07 1.9E-11 79.2 9.9 44 85-128 80-123 (124)
42 1v5i_B POIA1, IA-1=serine prot 98.4 1.4E-06 4.7E-11 69.8 9.3 42 87-128 31-75 (76)
43 2ek8_A Aminopeptidase; metallo 97.2 0.00081 2.8E-08 72.1 9.3 74 426-506 107-182 (421)
44 2z30_B TK-subtilisin; thermoco 97.1 0.00099 3.4E-08 51.2 6.7 44 84-128 21-64 (65)
45 3fed_A Glutamate carboxypeptid 96.3 0.0036 1.2E-07 70.9 6.3 72 429-507 150-268 (707)
46 3kas_A Transferrin receptor pr 96.2 0.0042 1.4E-07 69.6 6.1 70 430-506 128-230 (640)
47 3iib_A Peptidase M28; YP_92679 95.8 0.015 5.2E-07 62.5 8.1 79 429-508 124-216 (444)
48 3lxu_X Tripeptidyl-peptidase 2 89.3 0.15 5E-06 61.1 2.6 25 151-175 32-56 (1354)
49 1y9z_A Alkaline serine proteas 86.1 0.36 1.2E-05 51.6 3.2 28 538-578 183-210 (441)
50 1wgl_A TOLL-interacting protei 69.6 1.3 4.6E-05 32.7 0.8 30 607-636 11-40 (59)
51 3hjr_A Extracellular serine pr 44.0 5.4 0.00018 44.2 0.4 47 589-635 326-372 (600)
52 2dhy_A CUE domain-containing p 41.6 10 0.00036 28.7 1.6 28 609-636 22-49 (67)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=2e-79 Score=692.20 Aligned_cols=453 Identities=32% Similarity=0.497 Sum_probs=386.7
Q ss_pred CCCCCcccCCCC--CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCC-CCCCccccCCCCCCCCCCCce
Q 006605 130 TTHTPEFLGLPT--GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVP-KYRGKCEVDPDTKRSFCNGKI 206 (639)
Q Consensus 130 ~~~~~~~~g~~~--~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~ki 206 (639)
++++|+|+||.+ .+|.. +++|+||+|||||||||++||+|.+.+ +.+++ .|++.|+.+.+|+...||+|+
T Consensus 1 Tt~s~~flgl~~~~~~w~~----~~~G~gViVaViDTGId~~Hp~f~d~g---~~p~p~~wkg~c~~g~~f~~~~cN~ki 73 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPA----SGLGQDVIVAVLDSGIWPESASFQDDG---MPEIPKRWKGICKPGTQFNASMCNRKL 73 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHH----HGGGTTCEEEEEESCBCTTSGGGCCTT---CCCCCTTCCCCBCCBTTBCTTSCCSSE
T ss_pred CCCChHHcCCCCchhhHhc----cCCCCCCEEEEEccCCCCCChhhccCC---CCCCccccccccccCccccccccccce
Confidence 356788999863 47776 689999999999999999999999874 56777 999999999999999999999
Q ss_pred EeeecchhhHhhhccCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCH
Q 006605 207 IGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFV 286 (639)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~ 286 (639)
+++++|.++..... .+...+..+++|.+||||||||||||+..++.++.|+..+.+.||||+|+|+++|+++..+ +..
T Consensus 74 ig~~~f~~~~~~~~-~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~ 151 (649)
T 3i6s_A 74 IGANYFNKGILAND-PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG-TFT 151 (649)
T ss_dssp EEEEECCHHHHHHC-TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE-ECH
T ss_pred eeeEeccCcccccc-cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCC-CCH
Confidence 99999998765443 4555566788999999999999999998777777777777789999999999999999864 899
Q ss_pred HHHHHHHHHHHhCCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCccEEEcee
Q 006605 287 ADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAA 366 (639)
Q Consensus 287 s~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~ 366 (639)
+++++||+||+++|+||||||||.... .+..+++..++++|.++||+||+||||+|+...++++.+||+|+|||+
T Consensus 152 ~~i~~Ai~~A~~~gvdVIn~SlG~~~~-----~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAs 226 (649)
T 3i6s_A 152 SDLIAAMDQAVADGVDMISISYGYRFI-----PLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASG 226 (649)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCCSC-----CGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCCccCCc-----ccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeee
Confidence 999999999999999999999998632 456789999999999999999999999999999999999999999999
Q ss_pred ecCcceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCc--cccEEEEeeecc
Q 006605 367 IDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLV--EGNILLCGYSFN 444 (639)
Q Consensus 367 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~--~Gkivl~~r~~~ 444 (639)
+.++.|...+.+|+++.+.|.+++........+++++.. ....|. +..++..++ +||||||.|
T Consensus 227 t~dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~-----------~~~~C~-~~~l~~~~vdl~GkIvlc~~--- 291 (649)
T 3i6s_A 227 HTDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK-----------TLSDCS-SEELLSQVENPENTIVICDD--- 291 (649)
T ss_dssp ECSCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT-----------TTTTCC-CHHHHTTSSSGGGCEEEECC---
T ss_pred ecccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc-----------cccccc-cccccccccccCCcEEEEeC---
Confidence 999999999999999999999988766556779998854 235687 345666666 999999998
Q ss_pred cccCcchhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeE
Q 006605 445 FVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTG 524 (639)
Q Consensus 445 ~~~g~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 524 (639)
|.|.+.+|..+++++|+.++|++++. .........+|++.|.. ++++.|++|+++. ++|..
T Consensus 292 ---g~~~~~~k~~~~~~~Ga~g~i~~n~~----~~~~~~~~~~P~~~v~~-~~g~~i~~yi~s~--~~~~a--------- 352 (649)
T 3i6s_A 292 ---NGDFSDQMRIITRARLKAAIFISEDP----GVFRSATFPNPGVVVNK-KEGKQVINYVKNS--VTPTA--------- 352 (649)
T ss_dssp ---CSCHHHHHHHHHHHTCSEEEEECCCG----GGGGCCCCCSCEEEECH-HHHHHHHHHHHTC--SSCEE---------
T ss_pred ---CCccHHHHHHHHHhcCceEEEEecCc----cccccccCcCCEEEEcH-HHHHHHHHHHhcC--CCceE---------
Confidence 78999999999999999999999985 22334567899999998 9999999999986 45543
Q ss_pred EEccCcccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCc----CCCceEEEeeecc
Q 006605 525 TIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANF----VGKRICLDIWNQY 600 (639)
Q Consensus 525 ~i~~~~~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~----~~~~y~~~sGTSm 600 (639)
+|.+..+.......+.+++||||||+.+ .+++|||||+|||++|+|||+......... ....|.+||||||
T Consensus 353 ~i~~~~t~~~~~~~~~va~FSSrGP~~~-----~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSM 427 (649)
T 3i6s_A 353 TITFQETYLDTKPAPVVAASSARGPSRS-----YLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSM 427 (649)
T ss_dssp EEEEEEEECCCSSCCEECTTSCCSSCTT-----CTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHH
T ss_pred EEeecceeeccCCCCcccccCCCCCCCC-----CCCccCCeEEeCCCCeEeecCCCCCccccccccccccceeccccccc
Confidence 3444444455677899999999999986 589999999999999999998753321111 2368999999999
Q ss_pred ccccccccceeccccCCCCCHHHHHHHHhhccccc
Q 006605 601 GCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEV 635 (639)
Q Consensus 601 AaP~vaG~~al~~~~~p~~sp~~i~~~~~~~~~~~ 635 (639)
|||||||++||++|+||+|||++||++|+..-..+
T Consensus 428 AaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~ 462 (649)
T 3i6s_A 428 AAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPL 462 (649)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCB
T ss_pred ccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccc
Confidence 99999999999999999999999999999865443
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=2.6e-74 Score=652.38 Aligned_cols=450 Identities=32% Similarity=0.508 Sum_probs=369.0
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCC-CCCCccccCCCCCCCCCCCceEe
Q 006605 130 TTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVP-KYRGKCEVDPDTKRSFCNGKIIG 208 (639)
Q Consensus 130 ~~~~~~~~g~~~~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~ki~~ 208 (639)
++++|+|+||++..|.+ ..+|+||+|||||||||++||+|.+.+ +.+++ .|++.|+.+.+| .||+|+++
T Consensus 1 tt~s~~flGl~~~~~~~----~~~G~gViVgViDTGId~~Hp~f~d~g---~~~~~~~w~g~~~~~~~~---~~n~k~ig 70 (621)
T 3vta_A 1 TTRSWDFLGFPLTVPRR----SQVESNIVVGVLDTGIWPESPSFDDEG---FSPPPPKWKGTCETSNNF---RCNRKIIG 70 (621)
T ss_dssp CCSHHHHTTCCTTCCCC----HHHHTTCEEEEEESCBCTTSGGGCCTT---CCCCCTTCCCCBCCSSSC---CCCSSEEE
T ss_pred CCCChhHcCCCcccccc----CCCCCCCEEEEEecCCCCCChhhcCCC---CCCcccccccccccCCCc---ccCcceee
Confidence 46788999998888877 678999999999999999999998763 56666 999999988777 59999999
Q ss_pred eecchhhHhhhccCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHH
Q 006605 209 AQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVAD 288 (639)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~ 288 (639)
+++|..+. .....+..+|+|++||||||||||||+...+.++.|...+.+.||||+|+|+++|+|++. ++..++
T Consensus 71 ~~~~~~~~-----~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~-g~~~~d 144 (621)
T 3vta_A 71 ARSYHIGR-----PISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWND-GCSDTD 144 (621)
T ss_dssp EEECCCSS-----SCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETT-EECHHH
T ss_pred eeecccCC-----ccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCC-CCCHHH
Confidence 99997652 223345567899999999999999999776666666666778999999999999999986 578899
Q ss_pred HHHHHHHHHhCCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCccEEEceeec
Q 006605 289 VVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAID 368 (639)
Q Consensus 289 i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~ 368 (639)
+++||+||+++|+||||||||+..+. .+..++++.+++++.++||++|+||||+|+...++++.+||+++|++.+.
T Consensus 145 i~~a~~~a~~~g~dVin~SlG~~~~~----~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~ 220 (621)
T 3vta_A 145 ILAAYDDAIADGVDIISLSVGGANPR----HYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTM 220 (621)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCCCGG----GGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECC
T ss_pred HHHHHHHHHHhCCCEEEecCCCCCCC----CcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeec
Confidence 99999999999999999999986554 34567899999999999999999999999999999999999999999999
Q ss_pred CcceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccC
Q 006605 369 DRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTG 448 (639)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g 448 (639)
++.+.....++++..+.+.++... ....++++...+...... .......|. +..+++.+++|||++|.+.
T Consensus 221 d~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~v~gkivl~~~~------ 290 (621)
T 3vta_A 221 DRKFVTQVQIGNGQSFQGVSINTF--DNQYYPLVSGRDIPNTGF-DKSTSRFCT-DKSVNPNLLKGKIVVCEAS------ 290 (621)
T ss_dssp SEEEEEEEEETTSCEEEEBCCCCS--CCEEECEEETTTSCCTTC-CHHHHTTTC-TTCSCGGGTTTSEEECSSC------
T ss_pred cccceeeEEeccCceeeeeecccC--CCcccccccccccccccc-ccccccccc-ccccccccccceEEEEecC------
Confidence 999999999999999988876543 345667776554432111 122334576 4567788999999999863
Q ss_pred cchhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEcc
Q 006605 449 TASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGD 528 (639)
Q Consensus 449 ~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 528 (639)
+..+..+.+.+|+.+++++++.... ...+.+|...+.. .++..++.++... ..+... +..
T Consensus 291 ---~~~~~~~~~~~Ga~gvi~~~~~~~~-----~~~~~lP~~~v~~-~~g~~i~~~~~~~--~~~~a~---------~~~ 350 (621)
T 3vta_A 291 ---FGPHEFFKSLDGAAGVLMTSNTRDY-----ADSYPLPSSVLDP-NDLLATLRYIYSI--RSPGAT---------IFK 350 (621)
T ss_dssp ---CCHHHHHHHHTTCSEEEEECSCCSS-----CCCCSSSEEEECH-HHHHHHHHHHHHH--SSCCEE---------ECC
T ss_pred ---CChhHHhhhhcceeEEEEEecCCCc-----ccccccceEEECH-HHHHHHHHHHhcc--CCcceE---------Eec
Confidence 3456677888999999999875431 2346799999988 9999999998875 233222 222
Q ss_pred CcccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeecccccccccc
Q 006605 529 GLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRD 608 (639)
Q Consensus 529 ~~~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~ 608 (639)
. +.......+.++.||||||+.. .+++|||||+|||++|+|||+..........+..|.+|||||||||||||+
T Consensus 351 ~-~~~~~~~~~~va~FSSrGP~~~-----~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~~~~y~~~SGTSMAaPhVAGv 424 (621)
T 3vta_A 351 S-TTILNASAPVVVSFSSRGPNRA-----TKDVIKPDISGPGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGI 424 (621)
T ss_dssp C-EEEECTTCCCBCTTSCCCSCTT-----CTTSCSCCEEEECSSEEEECCSSSCBTTBCCCCSEEEECSHHHHHHHHHHH
T ss_pred c-eEeccCCCCceeeecCCCCCCC-----CCCeeccccccCCcceEeecCccccccCcCCCCcceEecCccccchhhhhH
Confidence 2 1234567889999999999986 479999999999999999999776655555678899999999999999999
Q ss_pred ceeccccCCCCCHHHHHHHHhhccccc
Q 006605 609 SCSCEAEAPLLEPSCYKISIDDHNNEV 635 (639)
Q Consensus 609 ~al~~~~~p~~sp~~i~~~~~~~~~~~ 635 (639)
+||++|+||+|||+|||++||.--+.+
T Consensus 425 aALl~q~~P~~spa~IksaLmtTA~~~ 451 (621)
T 3vta_A 425 ATYVKTYNPTWSPAAIKSALMTTASPM 451 (621)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHTCBCC
T ss_pred HHHHHHHCCCCCHHHHHHHHHhcCCcc
Confidence 999999999999999999999876543
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1e-64 Score=596.30 Aligned_cols=406 Identities=18% Similarity=0.196 Sum_probs=310.9
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCC---------C-CCCCCCCceEeeec
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPD---------T-KRSFCNGKIIGAQH 211 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~n~ki~~~~~ 211 (639)
.+|.. +++|+||+|||||||||++||+|.... .|++.|..... + ...+||+|++++++
T Consensus 8 ~~w~~----~~~G~GV~VaVIDTGId~~Hp~f~~~~--------~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~ 75 (926)
T 1xf1_A 8 TLQEK----AGKGAGTVVAVIDAGFDKNHEAWRLTD--------KTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHD 75 (926)
T ss_dssp HHHHH----HCSCTTCEEEEEESCCTTCCCCCSCCS--------CCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEE
T ss_pred HHHhc----cCCCCCcEEEEEecCCCCCCHhHcCCC--------CCcccccchhhhcccccccCcccccccCcccceeec
Confidence 56766 689999999999999999999999653 46555542211 1 23479999999999
Q ss_pred chhhHhhhccCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCC-CCHHHHH
Q 006605 212 FAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFG-GFVADVV 290 (639)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~-~~~s~i~ 290 (639)
|.++ ... .|..||||||||||||+...+.+. .+.+.||||+|+|+++|++++.+. +..++++
T Consensus 76 ~~~~------------~~~-~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~ 138 (926)
T 1xf1_A 76 YSKD------------GKT-AVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYA 138 (926)
T ss_dssp SCCC------------SCC-CCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHH
T ss_pred cccC------------CCC-CCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHH
Confidence 8653 122 288999999999999986443221 245789999999999999987643 4567899
Q ss_pred HHHHHHHhCCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCC---------------CCccc
Q 006605 291 AAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP---------------KTLVS 355 (639)
Q Consensus 291 ~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~---------------~~~~~ 355 (639)
+||+||+++|+||||||||....+. ....+.+..++++|.++||+||+||||+|+.. ...|+
T Consensus 139 ~Ai~~Ai~~gvdVIn~SlG~~~~~~---~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA 215 (926)
T 1xf1_A 139 QAIRDAINLGAKVINMSFGNAALAY---ANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPA 215 (926)
T ss_dssp HHHHHHHHTTCEEEEECCSSCCCTT---CCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCT
T ss_pred HHHHHHHHhCCcEEEECCCCCCCCc---cccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcc
Confidence 9999999999999999999865432 23467889999999999999999999999632 12344
Q ss_pred CCCccEEEceeecCcceeeeeEe-CCCeEEEeeccC--CCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCc
Q 006605 356 YSPWITTVAAAIDDRRYKNHLNL-GNGKILAGIGLS--PATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLV 432 (639)
Q Consensus 356 ~~~~vitVgA~~~~~~~~~~~~~-g~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 432 (639)
.+||+|+|||++.++.+...+.+ +++....+.++. ........+++++... .|. +..+ .++
T Consensus 216 ~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-------------g~~-~~~~--~~v 279 (926)
T 1xf1_A 216 AADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-------------GTK-EDDF--KDV 279 (926)
T ss_dssp TTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-------------SCS-TTTT--TTC
T ss_pred cCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-------------CCC-ccch--hhc
Confidence 57999999999999888877776 554333332221 1222356788887543 365 2334 589
Q ss_pred cccEEEEeeecccccCcchhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcC
Q 006605 433 EGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRD 512 (639)
Q Consensus 433 ~Gkivl~~r~~~~~~g~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~ 512 (639)
+||||||+| |.|.+.+|+.+++++||+++|++++.............++|+..|.. .+++.|++ +
T Consensus 280 ~Gkivl~~r------g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~-~~g~~l~~--------~ 344 (926)
T 1xf1_A 280 KGKIALIER------GDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISR-KDGLLLKD--------N 344 (926)
T ss_dssp TTSEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECH-HHHHHHHH--------C
T ss_pred CCeEEEEEC------CCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeH-HHHHHHHh--------C
Confidence 999999998 78999999999999999999999886432222334567899999998 88887764 1
Q ss_pred CccceeecceeEEEccCcccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCce
Q 006605 513 WTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRI 592 (639)
Q Consensus 513 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y 592 (639)
|..+ +++............+.++.||||||+.+ ++|||||+|||++|+|+++ ++.|
T Consensus 345 ~~~t-------i~~~~~~~~~~~~~~~~~a~FSSrGp~~~-------~~lKPDI~APG~~I~sa~~----------~~~y 400 (926)
T 1xf1_A 345 PQKT-------ITFNATPKVLPTASGTKLSRFSSWGLTAD-------GNIKPDIAAPGQDILSSVA----------NNKY 400 (926)
T ss_dssp SSCE-------EEECSSCEEEECSSCSBCCTTSCCCBCTT-------SCBSCCEEEECCCEEESSS----------CSSS
T ss_pred CceE-------EEecccceecccCCcceeccccCCCCCCC-------CccCceEECCCCCEEeecc----------CCcc
Confidence 2222 22222222233456789999999999974 9999999999999999996 5689
Q ss_pred EEEeeeccccccccccceecc----ccCCCCCHHH----HHHHHhhcccc
Q 006605 593 CLDIWNQYGCTTYSRDSCSCE----AEAPLLEPSC----YKISIDDHNNE 634 (639)
Q Consensus 593 ~~~sGTSmAaP~vaG~~al~~----~~~p~~sp~~----i~~~~~~~~~~ 634 (639)
..|||||||||||||++||++ +.||.|||+| ||++|+.....
T Consensus 401 ~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~ 450 (926)
T 1xf1_A 401 AKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATA 450 (926)
T ss_dssp CEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBC
T ss_pred eecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999995 5699999998 99999976543
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.6e-54 Score=481.33 Aligned_cols=316 Identities=27% Similarity=0.417 Sum_probs=249.8
Q ss_pred CeeEEEeecceeeEEEEEcCHHHHHHH-----------HcCCCceEEEeeeeecccCCCC-----CcccCCCCCCCCCCC
Q 006605 85 TYKKLYSYKHLINGFAVHITPDQAEIL-----------QRAPGVKSVERDWKVRRLTTHT-----PEFLGLPTGVWPTGG 148 (639)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~~~~~~~~~L-----------~~~p~V~~v~~~~~~~~~~~~~-----~~~~g~~~~~w~~~~ 148 (639)
..+++++|. .+++|+++++++++++| +++|+|++||++..+++..... ...++ .+.+|..
T Consensus 59 g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 134 (539)
T 3afg_A 59 GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVM-ATNMWNL-- 134 (539)
T ss_dssp TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCB-CSCCBCC--
T ss_pred CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccC-cHhHHhc--
Confidence 457888886 79999999999999999 8899999999999887753221 11122 1356765
Q ss_pred CCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhccCCCCCCC
Q 006605 149 GFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDF 228 (639)
Q Consensus 149 ~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~ 228 (639)
+++|+||+|||||||||++||+|.++ ++.+++|.++ .
T Consensus 135 --g~~G~gv~VaViDtGid~~Hpdl~~~-----------------------------i~~~~d~~~~------------~ 171 (539)
T 3afg_A 135 --GYDGSGITIGIIDTGIDASHPDLQGK-----------------------------VIGWVDFVNG------------K 171 (539)
T ss_dssp --SCCCTTCEEEEEESBCCTTSGGGTTT-----------------------------EEEEEETTTC------------C
T ss_pred --CCCCCCcEEEEEecCCCCCChHHhCC-----------------------------EeeeEECCCC------------C
Confidence 78999999999999999999999854 6666777543 2
Q ss_pred CCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhC----CCcEE
Q 006605 229 ASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD----GVDIL 304 (639)
Q Consensus 229 ~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~----g~dVI 304 (639)
..+.|++||||||||||+|.... ..+.+.||||+|+|+.+|++++.+.++.+++++||+||+++ |++||
T Consensus 172 ~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vi 244 (539)
T 3afg_A 172 TTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVI 244 (539)
T ss_dssp SSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEE
Confidence 35678999999999999997432 12336899999999999999987778899999999999985 99999
Q ss_pred EeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC--CcccCCCccEEEceeecCcceeeeeEeCCCe
Q 006605 305 SLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK--TLVSYSPWITTVAAAIDDRRYKNHLNLGNGK 382 (639)
Q Consensus 305 n~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~--~~~~~~~~vitVgA~~~~~~~~~~~~~g~~~ 382 (639)
|||||.... ....+.+..+++++.++|++||+||||+|+... ..|+.++++|+|||++.
T Consensus 245 n~SlG~~~~-----~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~-------------- 305 (539)
T 3afg_A 245 NLSLGSSQS-----SDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDK-------------- 305 (539)
T ss_dssp EECCCCCSC-----CCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECT--------------
T ss_pred EeCCCCCCC-----CccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecC--------------
Confidence 999998643 123578999999999999999999999997532 23444455565554210
Q ss_pred EEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHHHHhc
Q 006605 383 ILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSL 462 (639)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~~ 462 (639)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCccccc
Q 006605 463 GAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVA 542 (639)
Q Consensus 463 Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ia 542 (639)
.+.++
T Consensus 306 ---------------------------------------------------------------------------~~~~a 310 (539)
T 3afg_A 306 ---------------------------------------------------------------------------YDVIT 310 (539)
T ss_dssp ---------------------------------------------------------------------------TSCBC
T ss_pred ---------------------------------------------------------------------------Ccccc
Confidence 00237
Q ss_pred cccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCCCCCHH
Q 006605 543 LFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPS 622 (639)
Q Consensus 543 ~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~~sp~ 622 (639)
+||||||+.+ +++||||+|||++|+|+++..... .......|..++|||||||||||++||+++++|.|||+
T Consensus 311 ~fSs~Gp~~~-------~~~kpdi~APG~~I~s~~~~~~~~-~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~ 382 (539)
T 3afg_A 311 DFSSRGPTAD-------NRLKPEVVAPGNWIIAARASGTSM-GQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPD 382 (539)
T ss_dssp SSSCCCCCTT-------CBCCCSEEEECSSEEEECCTTCCC-SEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred cccCCCCCCC-------CCCcccEecCcCCEEeeccCCCCC-CCCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHH
Confidence 8999999984 899999999999999999653210 11123469999999999999999999999999999999
Q ss_pred HHHHHHhhcccccc
Q 006605 623 CYKISIDDHNNEVG 636 (639)
Q Consensus 623 ~i~~~~~~~~~~~~ 636 (639)
|||.+|+......+
T Consensus 383 ~vk~~L~~tA~~~~ 396 (539)
T 3afg_A 383 KVKTALIETADIVK 396 (539)
T ss_dssp HHHHHHHHHSBCSS
T ss_pred HHHHHHHhhCccCC
Confidence 99999998776543
No 5
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1.8e-53 Score=475.32 Aligned_cols=297 Identities=19% Similarity=0.186 Sum_probs=40.8
Q ss_pred CeeEEEeecceeeEEEEEcCHHHHHHHHcCCCceEEEeeeeecccCCCCCcccCCCC--------CCCCCCCCCCCCCCc
Q 006605 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHTPEFLGLPT--------GVWPTGGGFDRAGED 156 (639)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~g~~~--------~~w~~~~~~~~~G~g 156 (639)
..++++.|..+|+||+++++++++++|+++|+|++||++..++.+. ..|++.. ..|.. +++|+|
T Consensus 108 ~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~~----~pWgL~~i~~~~~~~~~w~~----~~~G~G 179 (692)
T 2p4e_P 108 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQS----IPWNLERITPPRYRADEYQP----PDGGSL 179 (692)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC-----------------------------------
T ss_pred ccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccCC----CCcchhhccccccccccccc----CCCCCC
Confidence 4578899999999999999999999999999999999999886522 1244421 13443 689999
Q ss_pred eEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhccCCCCCCCCCCCCCCC
Q 006605 157 IVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDG 236 (639)
Q Consensus 157 v~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g 236 (639)
|+|||||||||++||+|.++.. |. +| ++..+. +.......+.|.+|
T Consensus 180 V~VaVIDTGId~~HpdL~gr~~--------~~-------~~-------------~~~~d~------dg~~~~~~~~D~~G 225 (692)
T 2p4e_P 180 VEVYLLDTSIQSDHREIEGRVM--------VT-------DF-------------ENVPEE------DGTRFHRQASKCDS 225 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEcCCCCCCChhhcCceE--------ec-------cc-------------ccccCC------CCCcccCCCCCCCC
Confidence 9999999999999999997621 10 00 000000 00000134678999
Q ss_pred CchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhC------CCcEEEeccCC
Q 006605 237 HGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD------GVDILSLSVGP 310 (639)
Q Consensus 237 HGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~------g~dVIn~SlG~ 310 (639)
|||||||||+|+ ..||||+|+|+.+||+++++.++.+++++||+|++++ +++|||||||+
T Consensus 226 HGTHVAGiIAg~--------------~~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg 291 (692)
T 2p4e_P 226 HGTHLAGVVSGR--------------DAGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAG 291 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cHHHhhhHhhcC--------------CCccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCC
Confidence 999999999996 2699999999999999988778899999999999986 89999999996
Q ss_pred CCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCC-cccCCCccEEEceeecCcceeeeeEeCCCeEEEeecc
Q 006605 311 NSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKT-LVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGL 389 (639)
Q Consensus 311 ~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~~~vitVgA~~~~~~~~~~~~~g~~~~~~~~~~ 389 (639)
. +...++.+++++.++|++||+||||+|.+... +|+..+++|+|||++.++.
T Consensus 292 ~---------~s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~------------------ 344 (692)
T 2p4e_P 292 G---------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQ------------------ 344 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred C---------CcHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCC------------------
Confidence 3 13577888999999999999999999986543 3566688888887542110
Q ss_pred CCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHHHHhcCCeEEEE
Q 006605 390 SPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVL 469 (639)
Q Consensus 390 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~~Ga~gvi~ 469 (639)
+
T Consensus 345 ---------------------------------------------------~---------------------------- 345 (692)
T 2p4e_P 345 ---------------------------------------------------P---------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred eecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCccccccccCCCC
Q 006605 470 AVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGP 549 (639)
Q Consensus 470 ~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ia~FSS~GP 549 (639)
.. | -+.||+|||
T Consensus 346 -----------------------a~-------------------------~--------------------ss~fSn~G~ 357 (692)
T 2p4e_P 346 -----------------------VT-------------------------L--------------------GTLGTNFGR 357 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------cc-------------------------c--------------------ccccCCCCC
Confidence 00 0 023677776
Q ss_pred CCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCCCCCHHHHHHHHh
Q 006605 550 NIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISID 629 (639)
Q Consensus 550 t~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~~sp~~i~~~~~ 629 (639)
||||+|||++|+|+++.. +..|..++|||||||||||++||+++++|.|||+|||..|+
T Consensus 358 -------------~vDI~APG~~I~St~~~~--------~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~ 416 (692)
T 2p4e_P 358 -------------CVDLFAPGEDIIGASSDC--------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLI 416 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------ceeEEecCCcEEeeccCC--------CCceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 489999999999998732 35789999999999999999999999999999999999998
Q ss_pred hcc
Q 006605 630 DHN 632 (639)
Q Consensus 630 ~~~ 632 (639)
...
T Consensus 417 ~tA 419 (692)
T 2p4e_P 417 HFS 419 (692)
T ss_dssp ---
T ss_pred Hhc
Confidence 754
No 6
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.2e-51 Score=443.91 Aligned_cols=299 Identities=22% Similarity=0.313 Sum_probs=240.3
Q ss_pred CeeEEEeecceeeEEEEEcCHHHHHHHHcCCCceEEEeeeeecccCCCC-----------CcccCC----CCCCCCCCCC
Q 006605 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHT-----------PEFLGL----PTGVWPTGGG 149 (639)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~-----------~~~~g~----~~~~w~~~~~ 149 (639)
..+++++|. .+++++++++++++++|+++|+|++|+++..+++..... ...|++ .+.+|..
T Consensus 23 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~--- 98 (395)
T 2z2z_A 23 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSI--- 98 (395)
T ss_dssp TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGT---
T ss_pred CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHHHHhh---
Confidence 567888887 599999999999999999999999999999887643221 112322 1346665
Q ss_pred CCCCCCc--eEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhccCCCCCC
Q 006605 150 FDRAGED--IVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVD 227 (639)
Q Consensus 150 ~~~~G~g--v~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~ 227 (639)
+ +|+| |+|||||||||++||+|.++ +..+++|.++.. . .+
T Consensus 99 -~-~G~g~~v~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~~~~~-----~--~~ 140 (395)
T 2z2z_A 99 -T-DGSVSVIQVAVLDTGVDYDHPDLAAN-----------------------------IAWCVSTLRGKV-----S--TK 140 (395)
T ss_dssp -C-SSCCTTCEEEEEESCBCTTCTTTGGG-----------------------------EEEEEECGGGCC-----B--CC
T ss_pred -c-CCCCCcEEEEEEcCCCCCCChhHhhc-----------------------------cccCccccCCcc-----c--CC
Confidence 4 8999 99999999999999999954 455556654310 0 00
Q ss_pred CCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhC--------
Q 006605 228 FASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD-------- 299 (639)
Q Consensus 228 ~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~-------- 299 (639)
..++.|++||||||||||+|..+ + .++.||||+|+|+.+|++++.+.++.+++++||+||+++
T Consensus 141 ~~~~~d~~gHGT~vAgiia~~~n-~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~ 211 (395)
T 2z2z_A 141 LRDCADQNGHGTHVIGTIAALNN-D--------IGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKD 211 (395)
T ss_dssp HHHHBCSSSHHHHHHHHHHCCCS-S--------SSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTT
T ss_pred CCCCCCCCCCHHHHHHHHHeecC-C--------CceEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCcccccccc
Confidence 11246789999999999999732 1 236899999999999999987778899999999999988
Q ss_pred ------------CCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCccEEEceee
Q 006605 300 ------------GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAI 367 (639)
Q Consensus 300 ------------g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~ 367 (639)
+++|||||||.... ...+..+++++.++|+++|+||||+|.....+|+..+++|+|||++
T Consensus 212 ~~~~~~~~~~~~~~~Vin~S~G~~~~--------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~ 283 (395)
T 2z2z_A 212 GDGIIAGDPDDDAAEVISMSLGGPAD--------DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAID 283 (395)
T ss_dssp CSSCCTTCTTSCCCSEEEECEEBSCC--------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEEC
T ss_pred ccccccccccCCCCeEEEecCCCCCC--------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEec
Confidence 99999999997432 4578899999999999999999999987666666667777777631
Q ss_pred cCcceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeeccccc
Q 006605 368 DDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVT 447 (639)
Q Consensus 368 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~ 447 (639)
.
T Consensus 284 ~------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 284 S------------------------------------------------------------------------------- 284 (395)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred CcchhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEc
Q 006605 448 GTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIG 527 (639)
Q Consensus 448 g~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 527 (639)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccc
Q 006605 528 DGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSR 607 (639)
Q Consensus 528 ~~~~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG 607 (639)
.+.++.||+||| +|+|||++|+|+++ ++.|..++|||||||||||
T Consensus 285 ----------~~~~a~fS~~G~---------------~v~APG~~i~s~~~----------~~~y~~~sGTS~AaP~VaG 329 (395)
T 2z2z_A 285 ----------NDNIASFSNRQP---------------EVSAPGVDILSTYP----------DDSYETLMGTAMATPHVSG 329 (395)
T ss_dssp ----------TSCBCTTSCSSC---------------SEEEECSSEEEEET----------TTEEEEEESHHHHHHHHHH
T ss_pred ----------CCCCCcccCCCC---------------CEEeCCCCeeeecC----------CCceEecCCHHHHHHHHHH
Confidence 002368999988 24999999999997 5689999999999999999
Q ss_pred cceeccccCC-------------CCCHHHHHHHHhhcccccc
Q 006605 608 DSCSCEAEAP-------------LLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 608 ~~al~~~~~p-------------~~sp~~i~~~~~~~~~~~~ 636 (639)
++||+++++| .|||.|||.+|.......+
T Consensus 330 ~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~ 371 (395)
T 2z2z_A 330 VVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLG 371 (395)
T ss_dssp HHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCS
T ss_pred HHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccC
Confidence 9999999999 9999999999998776654
No 7
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=1.6e-49 Score=437.83 Aligned_cols=221 Identities=18% Similarity=0.225 Sum_probs=163.9
Q ss_pred CeeEEEeecceeeEEEEEcCHHHHHHHHc-CCCceEEEeeeeecccCCCCCc----------ccCC-----CCCCCCCCC
Q 006605 85 TYKKLYSYKHLINGFAVHITPDQAEILQR-APGVKSVERDWKVRRLTTHTPE----------FLGL-----PTGVWPTGG 148 (639)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~~~~~~~~~L~~-~p~V~~v~~~~~~~~~~~~~~~----------~~g~-----~~~~w~~~~ 148 (639)
+.++++.|. .+++|+++++++++++|++ +|+|++|+++..+++....... .|++ ....|..
T Consensus 65 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~-- 141 (471)
T 3t41_A 65 SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDD-- 141 (471)
T ss_dssp TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGG--
T ss_pred CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhc--
Confidence 567888885 5999999999999999999 9999999999888775433211 1222 1235554
Q ss_pred CCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhccCCCCCCC
Q 006605 149 GFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDF 228 (639)
Q Consensus 149 ~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~ 228 (639)
+++|+||+|||||||||++||+|.++.. .+.. .++....|... ..+...+.
T Consensus 142 --~~~G~gv~VaViDtGid~~Hp~~~~~~~---------~~~~-------------~~~~~~~~~~~-----~~~~~~~~ 192 (471)
T 3t41_A 142 --LPKHANTKIAIIDTGVMKNHDDLKNNFS---------TDSK-------------NLVPLNGFRGT-----EPEETGDV 192 (471)
T ss_dssp --CCSSCCCCEEEEESCCCTTCTTTTTTBC---------TTCE-------------ECCCTTCGGGC-----CTTCCCCT
T ss_pred --cCCCCCcEEEEEeCCCCCCChhHhcCcc---------cCCc-------------ccccCCCccCC-----CcccCCCC
Confidence 6899999999999999999999998621 1100 11111112111 11122233
Q ss_pred CCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhCCCcEEEecc
Q 006605 229 ASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSV 308 (639)
Q Consensus 229 ~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~g~dVIn~Sl 308 (639)
..+.|.+||||||||||+|+. ...||||+|+|+.+|++++ +.+..+++++||+|+++++++||||||
T Consensus 193 ~~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~-~~~~~~~i~~ai~~a~~~g~~Vin~S~ 259 (471)
T 3t41_A 193 HDVNDRKGHGTMVSGQTSANG------------KLIGVAPNNKFTMYRVFGS-KKTELLWVSKAIVQAANDGNQVINISV 259 (471)
T ss_dssp TCCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSCEEEEECCSS-SCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCcCCCCccchhhheeecCC------------ceeEECCCCeEEEEEeccC-CCCcHHHHHHHHHHHHhCCCCEEEeCC
Confidence 456789999999999999862 2689999999999999987 468899999999999999999999999
Q ss_pred CCCCCC--CCC--C----cCcccHHHHHHHHHHhCCcEEEEecCCCCCCC
Q 006605 309 GPNSPP--ATT--K----TTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP 350 (639)
Q Consensus 309 G~~~~~--~~~--~----~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~ 350 (639)
|..... .+. . ....+.+..+++.+.++|++||+||||+|...
T Consensus 260 G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~ 309 (471)
T 3t41_A 260 GSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDV 309 (471)
T ss_dssp CEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBT
T ss_pred CCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCC
Confidence 973210 000 0 02346788999999999999999999999754
No 8
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=1.8e-49 Score=432.94 Aligned_cols=357 Identities=16% Similarity=0.192 Sum_probs=259.2
Q ss_pred CCCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhc
Q 006605 141 TGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAAR 220 (639)
Q Consensus 141 ~~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~ 220 (639)
+.+|.. +|+||+|||||||||++||+|.++ ++.++++...
T Consensus 14 ~~~w~~------~g~gv~VaViDtGvd~~Hp~l~~~-----------------------------~~~~~~~~~~----- 53 (441)
T 1y9z_A 14 TVLSDS------QAGNRTICIIDSGYDRSHNDLNAN-----------------------------NVTGTNNSGT----- 53 (441)
T ss_dssp SSSCCT------TGGGCEEEEEESCCCTTSTTTTTS-----------------------------EEEECCCTTS-----
T ss_pred hhhhhc------CCCCcEEEEEcCCCCCCChhHhcC-----------------------------cccCcccCCC-----
Confidence 357765 477999999999999999999865 2222222211
Q ss_pred cCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCC--eEEEEEeeecCCCCCHHHHHHHHHHHHh
Q 006605 221 AFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRA--RIAVYKALYRLFGGFVADVVAAIDQAVH 298 (639)
Q Consensus 221 ~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A--~l~~~kv~~~~~~~~~s~i~~ai~~a~~ 298 (639)
.+...+.|..||||||||||+|..+. .++.||||+| +|+.+|++++.+.++.+++++||+||++
T Consensus 54 -----~~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~ 119 (441)
T 1y9z_A 54 -----GNWYQPGNNNAHGTHVAGTIAAIANN---------EGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVN 119 (441)
T ss_dssp -----CCTTCCCSSCCHHHHHHHHHHCCCSS---------SBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHH
T ss_pred -----CCCCCCCCCCCcHHHHHHHHhcccCC---------CCceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHH
Confidence 11235678899999999999997421 2378999995 9999999998766788899999999999
Q ss_pred C-CCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCccEEEceeecCcceeeeeE
Q 006605 299 D-GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLN 377 (639)
Q Consensus 299 ~-g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~ 377 (639)
+ |++|||||||.... ...+.++++++.++|++||+||||+|.....+|+..+++|+|||++.++....|++
T Consensus 120 ~~g~~Vin~S~G~~~~--------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~ 191 (441)
T 1y9z_A 120 SGGANVVTMSLGGSGS--------TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQ 191 (441)
T ss_dssp TTCCSEEEECCCBSCC--------BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSC
T ss_pred hcCCcEEEeCCCCCCC--------CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCcccc
Confidence 9 99999999997432 35778899999999999999999999988888888999999999999988888888
Q ss_pred eCCCeEEEee--ccCCCCC-CCce----------------ee--------eEEccccccccccccCCCCcCCC-CCCCcc
Q 006605 378 LGNGKILAGI--GLSPATH-GNRT----------------FT--------LVAANDVLLDSSVMKYSASDCQR-PEVLNK 429 (639)
Q Consensus 378 ~g~~~~~~~~--~~~~~~~-~~~~----------------~~--------l~~~~~~~~~~~~~~~~~~~c~~-~~~~~~ 429 (639)
.|...++..+ .+..... +... ++ +.+........ .......|.. +..++.
T Consensus 192 ~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~--~~~~~~~C~~~~~~~~~ 269 (441)
T 1y9z_A 192 YTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINAS--ATGALAECTVNGTSFSC 269 (441)
T ss_dssp CCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCE--EEEEEEEEEEETTEEEC
T ss_pred CCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccc--cccchhccccccccccC
Confidence 8877665433 2211111 0000 00 01110000000 0011234752 124567
Q ss_pred CCccccEEEEeeecccccCcchhhhhHHHHHhcCCeEEEEeecCCCCCcc-----cCCCcccccEEEEcCcchHHHHHHH
Q 006605 430 NLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTK-----FDPVPVGIPGILITDVTKSMDLVDY 504 (639)
Q Consensus 430 ~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~-----~~~~~~~ip~~~i~~~~~g~~l~~~ 504 (639)
.+++|||+||+|+... ...+.+.+|..+++++||.++|++++....+.. .......+|.+.|.. ++++.|+++
T Consensus 270 ~~~~gkivl~~rg~~~-~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~-~~g~~l~~~ 347 (441)
T 1y9z_A 270 GNMANKICLVERVGNQ-GSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDR-ATGLALKAK 347 (441)
T ss_dssp CCCTTEEEEEECCSCS-SSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECH-HHHHHHHTT
T ss_pred CCccccEEEEeccccC-cccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeH-HHHHHHHHH
Confidence 8999999999995210 012467789999999999999999986543321 123445799999988 899888775
Q ss_pred HhcCCCcCCccceeecceeEEEccCcccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCC
Q 006605 505 YNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDE 584 (639)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~ 584 (639)
+.. ++++ ++.
T Consensus 348 ~~~---------------~~t~------------------------------------------------~~~------- 357 (441)
T 1y9z_A 348 LGQ---------------STTV------------------------------------------------SNQ------- 357 (441)
T ss_dssp TTS---------------EEEE------------------------------------------------EEE-------
T ss_pred hcC---------------Cccc------------------------------------------------ccc-------
Confidence 432 1110 111
Q ss_pred CCcCCCceEEEeeeccccccccccceeccccCCCCCHHHHHHHHhhcccccc
Q 006605 585 ANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 585 ~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~~sp~~i~~~~~~~~~~~~ 636 (639)
.++.|.++||||||||||||++||++|+||+|||+|||++|+..-...+
T Consensus 358 ---~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~ 406 (441)
T 1y9z_A 358 ---GNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLS 406 (441)
T ss_dssp ---EEESEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCS
T ss_pred ---cCCCceeecccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhc
Confidence 1458999999999999999999999999999999999999998766543
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=2.3e-47 Score=428.85 Aligned_cols=313 Identities=19% Similarity=0.167 Sum_probs=227.6
Q ss_pred eeEEEeecceeeEEEEEcCH----HHHHHHH--cCCCceEEEeeeeecccC----CCC----------------------
Q 006605 86 YKKLYSYKHLINGFAVHITP----DQAEILQ--RAPGVKSVERDWKVRRLT----THT---------------------- 133 (639)
Q Consensus 86 ~~~~~~~~~~~~g~~~~~~~----~~~~~L~--~~p~V~~v~~~~~~~~~~----~~~---------------------- 133 (639)
.++++++. .+++++++++. +.+++|+ ++|+|++|||+..+++.. ...
T Consensus 53 ~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (671)
T 1r6v_A 53 GKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEEL 131 (671)
T ss_dssp CEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTT
T ss_pred CeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCcccccccccccccccccccccccc
Confidence 45666765 68899998864 3356676 489999999997665431 000
Q ss_pred -CcccCCC----CCC-CCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceE
Q 006605 134 -PEFLGLP----TGV-WPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKII 207 (639)
Q Consensus 134 -~~~~g~~----~~~-w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~ 207 (639)
...|++. +.+ |+. ++|+||+|||||||||++||+|.++. +
T Consensus 132 ~~~~W~l~~I~~~~a~w~~-----~tG~gV~VAVIDTGVd~~HpdL~~~~-----------------------------~ 177 (671)
T 1r6v_A 132 SNELWGLEAIGVTQQLWEE-----ASGTNIIVAVVDTGVDGTHPDLEGQV-----------------------------I 177 (671)
T ss_dssp GGGCHHHHHTTCCHHHHHH-----CSCTTCEEEEEESCCBTTSGGGTTTB-----------------------------C
T ss_pred cccCCchhccCCchhhhhc-----cCCCCCEEEEEeCCCCCCCccccccE-----------------------------E
Confidence 0112111 122 443 68999999999999999999999761 1
Q ss_pred eeecchhhHhhhccCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeec------C
Q 006605 208 GAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYR------L 281 (639)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~------~ 281 (639)
.++++..+. .. ....++.|.+||||||||||||..+ + .++.||||+|+|+++|++++ .
T Consensus 178 ~g~~~~~~~-----~~--p~~~d~~d~~gHGThVAGiIAa~~n-g--------~gv~GVAP~A~I~~vkv~~~~~~~~g~ 241 (671)
T 1r6v_A 178 AGYRPAFDE-----EL--PAGTDSSYGGSAGTHVAGTIAAKKD-G--------KGIVGVAPGAKIMPIVIFDDPALVGGN 241 (671)
T ss_dssp CEEEGGGTE-----EE--CTTCBCCTTCSHHHHHHHHHHCCCS-S--------SSCCCSCTTSEEEEEESBCCHHHHCTT
T ss_pred ecccccCCC-----cC--CCCCCCccCCCcchhhhhhhhccCC-C--------CceEEECCCCEEEEEEeccCccccCCC
Confidence 111111110 00 0112345678999999999999732 1 23789999999999999986 1
Q ss_pred CCCCHHHHHHHHHHHHhCCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCC-CCcccCCCcc
Q 006605 282 FGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP-KTLVSYSPWI 360 (639)
Q Consensus 282 ~~~~~s~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~~~v 360 (639)
+....+.+++||+||+++|++|||||||... +...+.++++++.++|+++|+||||+|.+. ..+|+..++|
T Consensus 242 g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~--------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~V 313 (671)
T 1r6v_A 242 GYVGDDYVAAGIIWATDHGAKVMNHSWGGWG--------YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGV 313 (671)
T ss_dssp SBCCHHHHHHHHHHHHHTTCSEEEECEEBSC--------CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTC
T ss_pred CccCHHHHHHHHHHHHHcCCCEEEeCCCCCC--------CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCe
Confidence 2234567999999999999999999999742 246789999999999999999999999764 4566666788
Q ss_pred EEEceeecCcceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEe
Q 006605 361 TTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCG 440 (639)
Q Consensus 361 itVgA~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~ 440 (639)
|+|||++.++
T Consensus 314 ItVgA~d~~g---------------------------------------------------------------------- 323 (671)
T 1r6v_A 314 IQVAALDYYG---------------------------------------------------------------------- 323 (671)
T ss_dssp EEEEEEEEET----------------------------------------------------------------------
T ss_pred EEEEEEcCCC----------------------------------------------------------------------
Confidence 8887743110
Q ss_pred eecccccCcchhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeec
Q 006605 441 YSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSF 520 (639)
Q Consensus 441 r~~~~~~g~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~ 520 (639)
. .
T Consensus 324 --------~--------------------------------------------~-------------------------- 325 (671)
T 1r6v_A 324 --------G--------------------------------------------T-------------------------- 325 (671)
T ss_dssp --------T--------------------------------------------E--------------------------
T ss_pred --------C--------------------------------------------c--------------------------
Confidence 0 0
Q ss_pred ceeEEEccCcccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCC--------CCcCCCce
Q 006605 521 KGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDE--------ANFVGKRI 592 (639)
Q Consensus 521 ~~~~~i~~~~~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~--------~~~~~~~y 592 (639)
..++.||+|||. |||+|||++|+|+++...... ...+++.|
T Consensus 326 ------------------~~~a~fSn~G~~-------------vdv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y 374 (671)
T 1r6v_A 326 ------------------FRVAGFSSRSDG-------------VSVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTY 374 (671)
T ss_dssp ------------------EEECSSSCCCTT-------------EEEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCE
T ss_pred ------------------eeeccccCCCCC-------------eeEEecCCCEEeecCCCCccccccccccccccCCCce
Confidence 023789999984 699999999999998542110 11235689
Q ss_pred EEEeeeccccccccccceeccccCCCCCHHHHHHHHhhcccccc
Q 006605 593 CLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 593 ~~~sGTSmAaP~vaG~~al~~~~~p~~sp~~i~~~~~~~~~~~~ 636 (639)
..++|||||||||||++||+++++|.|||.|||.+|.......+
T Consensus 375 ~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~ 418 (671)
T 1r6v_A 375 DYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFN 418 (671)
T ss_dssp EEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSS
T ss_pred EEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCC
Confidence 99999999999999999999999999999999999998766543
No 10
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=3.9e-45 Score=381.11 Aligned_cols=264 Identities=25% Similarity=0.315 Sum_probs=205.6
Q ss_pred CCCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhc
Q 006605 141 TGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAAR 220 (639)
Q Consensus 141 ~~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~ 220 (639)
+.+|.. +++|+||+|||||||||++||+|.++ +..+++|.+..
T Consensus 16 ~~~w~~----~~~G~gv~VaViDtGvd~~H~~l~~~-----------------------------~~~~~~~~~~~---- 58 (310)
T 2ixt_A 16 NDTLTS----TTGGSGINIAVLDTGVNTSHPDLVNN-----------------------------VEQCKDFTGAT---- 58 (310)
T ss_dssp CTTCCC----CCCCTTCEEEEEESCCCTTCTTTTTT-----------------------------EEEEEESSSSS----
T ss_pred hhhhhc----cCCCCCcEEEEEecCCCCCCHHHhhc-----------------------------ccccccccCCC----
Confidence 467776 78999999999999999999999864 44455554320
Q ss_pred cCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhCC
Q 006605 221 AFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDG 300 (639)
Q Consensus 221 ~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~g 300 (639)
........|..||||||||||+|.... +...+.||||+|+|+.+|++.+.+.++.+++++||+|+++++
T Consensus 59 ----~~~~~~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~ 127 (310)
T 2ixt_A 59 ----TPINNSCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQA 127 (310)
T ss_dssp ----SCEETCCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhh
Confidence 011123468899999999999997421 112478999999999999999887788999999999999988
Q ss_pred C-----cEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCC--CCCcccCCCccEEEceeecCccee
Q 006605 301 V-----DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPF--PKTLVSYSPWITTVAAAIDDRRYK 373 (639)
Q Consensus 301 ~-----dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~--~~~~~~~~~~vitVgA~~~~~~~~ 373 (639)
+ +|||||||... ....+..+++++.++|++||+||||+|.. ...+|+..+++|+|||++....
T Consensus 128 ~~~~~~~Vin~S~G~~~--------~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~-- 197 (310)
T 2ixt_A 128 TATGTKTIISMSLGSSA--------NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ-- 197 (310)
T ss_dssp HHHTCCEEEEECCCBSS--------CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE--
T ss_pred hccCCCeEEEEcCCCCC--------CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc--
Confidence 7 99999999843 24678899999999999999999999976 3456667788888888542100
Q ss_pred eeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhh
Q 006605 374 NHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIK 453 (639)
Q Consensus 374 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~ 453 (639)
. +
T Consensus 198 -------------------------------------------------------------------~------g----- 199 (310)
T 2ixt_A 198 -------------------------------------------------------------------N------G----- 199 (310)
T ss_dssp -------------------------------------------------------------------T------T-----
T ss_pred -------------------------------------------------------------------C------C-----
Confidence 0 0
Q ss_pred hhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccc
Q 006605 454 KVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPI 533 (639)
Q Consensus 454 ~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 533 (639)
.
T Consensus 200 ----------------------------------------~--------------------------------------- 200 (310)
T 2ixt_A 200 ----------------------------------------T--------------------------------------- 200 (310)
T ss_dssp ----------------------------------------E---------------------------------------
T ss_pred ----------------------------------------C---------------------------------------
Confidence 0
Q ss_pred cCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceecc
Q 006605 534 LHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCE 613 (639)
Q Consensus 534 ~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~ 613 (639)
..++.||+|||+.....| ..++.||||+|||++|+|+++ ++.|..++|||||||+|||++||++
T Consensus 201 -----~~~~~~S~~G~~~~~g~~-~~~~~~~di~ApG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~ 264 (310)
T 2ixt_A 201 -----YRVADYSSRGYISTAGDY-VIQEGDIEISAPGSSVYSTWY----------NGGYNTISGTSMATPHVSGLAAKIW 264 (310)
T ss_dssp -----EEECTTSCCCCTTTTTSS-SCCTTCCCEEEECSSEEEECT----------TSSEEEECSHHHHHHHHHHHHHHHH
T ss_pred -----eeeccccCCCCccCCccc-cccCCCeeEECCCCCEeeecC----------CCCEEeeccHHHHHHHHHHHHHHHH
Confidence 022567778875421000 013459999999999999986 5689999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhhccccc
Q 006605 614 AEAPLLEPSCYKISIDDHNNEV 635 (639)
Q Consensus 614 ~~~p~~sp~~i~~~~~~~~~~~ 635 (639)
+++|.|||.|||.+|.......
T Consensus 265 ~~~p~lt~~~v~~~L~~tA~~~ 286 (310)
T 2ixt_A 265 AENPSLSNTQLRSNLQERAKSV 286 (310)
T ss_dssp HHSTTCCHHHHHHHHHHHHHTS
T ss_pred HhCCCCCHHHHHHHHHhhCccc
Confidence 9999999999999999876554
No 11
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=5.1e-45 Score=373.95 Aligned_cols=239 Identities=24% Similarity=0.324 Sum_probs=191.2
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
.+|.. +..|+||+|||||||||++||+|.++ ++.+++|.++
T Consensus 22 ~aw~~----~~g~~gv~VaViDtGvd~~hp~l~~~-----------------------------~~~~~~~~~~------ 62 (280)
T 1dbi_A 22 YAWDV----TKGSSGQEIAVIDTGVDYTHPDLDGK-----------------------------VIKGYDFVDN------ 62 (280)
T ss_dssp HHTTT----CCCCTTCEEEEEESCCCTTSTTTTTT-----------------------------EEEEEETTTT------
T ss_pred HHHhh----cCCCCCCEEEEEeCCcCCCChhhccC-----------------------------cccceeccCC------
Confidence 56776 56677999999999999999999854 5556666543
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhCCC
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~g~ 301 (639)
..++.|..+|||||||||+|...++ .++.||||+|+|+.+|+++.++.+..+++++||+|++++++
T Consensus 63 ------~~~~~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~ 128 (280)
T 1dbi_A 63 ------DYDPMDLNNHGTHVAGIAAAETNNA--------TGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGA 128 (280)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTC
T ss_pred ------CCCCCCCCCcHHHHHHHHhCcCCCC--------CcceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCC
Confidence 2346788999999999999975432 23689999999999999998877889999999999999999
Q ss_pred cEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCccEEEceeecCcceeeeeEeCCC
Q 006605 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNG 381 (639)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~g~~ 381 (639)
+|||||||... ....++.+++++.++|+++|+||||+|.....+|+..+++|+|||++.+
T Consensus 129 ~Vin~S~G~~~--------~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------ 188 (280)
T 1dbi_A 129 EVINLSLGCDC--------HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY------------ 188 (280)
T ss_dssp SEEEECCSSCC--------CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT------------
T ss_pred CEEEeCCCCCC--------CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC------------
Confidence 99999999743 2467899999999999999999999997655555555666666653100
Q ss_pred eEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHHHHh
Q 006605 382 KILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKS 461 (639)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~ 461 (639)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCcccc
Q 006605 462 LGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQV 541 (639)
Q Consensus 462 ~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i 541 (639)
+.+
T Consensus 189 -----------------------------------------------------------------------------~~~ 191 (280)
T 1dbi_A 189 -----------------------------------------------------------------------------DRL 191 (280)
T ss_dssp -----------------------------------------------------------------------------SCB
T ss_pred -----------------------------------------------------------------------------CCc
Confidence 023
Q ss_pred ccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCCCCCH
Q 006605 542 ALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEP 621 (639)
Q Consensus 542 a~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~~sp 621 (639)
+.||+|||. |||+|||++|+|+++ ++.|..++|||||||||||++||+++ |.|+|
T Consensus 192 ~~~S~~G~~-------------~dv~ApG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~ 246 (280)
T 1dbi_A 192 ASFSNYGTW-------------VDVVAPGVDIVSTIT----------GNRYAYMSGTSMASPHVAGLAALLAS--QGRNN 246 (280)
T ss_dssp CTTBCCSTT-------------CCEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHHHH--TTCCH
T ss_pred CCCCCCCCC-------------ceEEEecCCeEeecC----------CCCEEEccCHHHHHHHHHHHHHHHHC--CCCCH
Confidence 678888873 799999999999986 56899999999999999999999976 99999
Q ss_pred HHHHHHHhhccccc
Q 006605 622 SCYKISIDDHNNEV 635 (639)
Q Consensus 622 ~~i~~~~~~~~~~~ 635 (639)
.|||.+|.......
T Consensus 247 ~~v~~~L~~ta~~~ 260 (280)
T 1dbi_A 247 IEIRQAIEQTADKI 260 (280)
T ss_dssp HHHHHHHHHTSBCC
T ss_pred HHHHHHHHHhCccC
Confidence 99999999876554
No 12
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1.3e-44 Score=371.01 Aligned_cols=239 Identities=24% Similarity=0.348 Sum_probs=197.3
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
.+|.. .+|+||+|||||||||++||+|.++ ++.+++|.++
T Consensus 22 ~aw~~-----~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~~------ 61 (279)
T 1thm_A 22 QAWDI-----AEGSGAKIAIVDTGVQSNHPDLAGK-----------------------------VVGGWDFVDN------ 61 (279)
T ss_dssp HHHTT-----CCCTTCEEEEEESCCCTTCTTTTTT-----------------------------EEEEEETTTT------
T ss_pred HHHhc-----CCCCCCEEEEEccCCCCCCcchhcC-----------------------------ccccccccCC------
Confidence 56776 4799999999999999999999954 5556666543
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhCCC
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~g~ 301 (639)
...+.|..+|||||||||+|...++ .++.||||+|+|+.+|+++.++.++.+++++||+||+++++
T Consensus 62 ------~~~~~d~~gHGT~vAgiia~~~~n~--------~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~ 127 (279)
T 1thm_A 62 ------DSTPQNGNGHGTHCAGIAAAVTNNS--------TGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGA 127 (279)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTC
T ss_pred ------CCCCCCCCCcHHHHHHHHhCccCCC--------CccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCC
Confidence 2346788999999999999975432 23689999999999999998877889999999999999999
Q ss_pred cEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCccEEEceeecCcceeeeeEeCCC
Q 006605 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNG 381 (639)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~g~~ 381 (639)
+|||||||... ....+.++++++.++|+++|+||||+|.....+|+..+++|+|||++.+
T Consensus 128 ~Vin~S~G~~~--------~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------ 187 (279)
T 1thm_A 128 KVISLSLGGTV--------GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN------------ 187 (279)
T ss_dssp SEEEECCCBSS--------CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT------------
T ss_pred CEEEEecCCCC--------CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC------------
Confidence 99999999843 2468899999999999999999999997655555555566665542100
Q ss_pred eEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHHHHh
Q 006605 382 KILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKS 461 (639)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~ 461 (639)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCcccc
Q 006605 462 LGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQV 541 (639)
Q Consensus 462 ~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i 541 (639)
+.+
T Consensus 188 -----------------------------------------------------------------------------~~~ 190 (279)
T 1thm_A 188 -----------------------------------------------------------------------------DNK 190 (279)
T ss_dssp -----------------------------------------------------------------------------SCB
T ss_pred -----------------------------------------------------------------------------CCc
Confidence 023
Q ss_pred ccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCCCCCH
Q 006605 542 ALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEP 621 (639)
Q Consensus 542 a~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~~sp 621 (639)
+.||++||. |||+|||++|+++++ ++.|..++|||||||+|||++||+ ++|.|||
T Consensus 191 ~~fS~~G~~-------------~dv~APG~~i~s~~~----------~~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~ 245 (279)
T 1thm_A 191 SSFSTYGSW-------------VDVAAPGSSIYSTYP----------TSTYASLSGTSMATPHVAGVAGLL--ASQGRSA 245 (279)
T ss_dssp CTTCCCCTT-------------CCEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHH--HTTTCCH
T ss_pred CCcCCCCCc-------------eEEEEcCCCeEEEeC----------CCCEEEcccHHHHHHHHHHHHHHH--HCCCcCH
Confidence 678888873 799999999999986 568999999999999999999999 6899999
Q ss_pred HHHHHHHhhcccccc
Q 006605 622 SCYKISIDDHNNEVG 636 (639)
Q Consensus 622 ~~i~~~~~~~~~~~~ 636 (639)
.|||.+|.+.....+
T Consensus 246 ~~v~~~L~~ta~~~~ 260 (279)
T 1thm_A 246 SNIRAAIENTADKIS 260 (279)
T ss_dssp HHHHHHHHHTCBCCT
T ss_pred HHHHHHHHHhCccCC
Confidence 999999998766543
No 13
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=9.2e-45 Score=369.68 Aligned_cols=238 Identities=24% Similarity=0.340 Sum_probs=196.4
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
.+|.. +++|+||+|+|||||| .+||+|+ +..+++|..+
T Consensus 15 ~a~~~----g~~G~gv~VaViDtGi-~~h~~l~-------------------------------~~~~~~~~~~------ 52 (269)
T 1gci_A 15 AAHNR----GLTGSGVKVAVLDTGI-STHPDLN-------------------------------IRGGASFVPG------ 52 (269)
T ss_dssp HHHHT----TCSCTTCEEEEEESCC-CCCTTCC-------------------------------EEEEEECSTT------
T ss_pred HHHhc----CCCCCCCEEEEECCCC-CCCHhhc-------------------------------ccCCcccCCC------
Confidence 45665 7899999999999999 8999995 2233444332
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhCCC
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~g~ 301 (639)
...+.|..+|||||||||+|..+ + ..+.||||+|+|+.+|+++..+.+..+++++||+|++++++
T Consensus 53 ------~~~~~d~~gHGT~vAgiia~~~~-~--------~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~ 117 (269)
T 1gci_A 53 ------EPSTQDGNGHGTHVAGTIAALNN-S--------IGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGM 117 (269)
T ss_dssp ------CCSCSCSSSHHHHHHHHHHCCCS-S--------SBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTC
T ss_pred ------CCCCCCCCCChHHHHHHHhcCcC-C--------CCcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCC
Confidence 12356889999999999999732 1 23689999999999999998777889999999999999999
Q ss_pred cEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCccEEEceeecCcceeeeeEeCCC
Q 006605 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNG 381 (639)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~g~~ 381 (639)
+|||||||.... ...++.+++++.++|+++|+||||+|.....+|+..+++|+|||++.
T Consensus 118 ~Vin~S~G~~~~--------~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 176 (269)
T 1gci_A 118 HVANLSLGSPSP--------SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------------- 176 (269)
T ss_dssp SEEEECCCBSSC--------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-------------
T ss_pred eEEEeCCCCCCC--------CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC-------------
Confidence 999999997432 45789999999999999999999999876666666666666665310
Q ss_pred eEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHHHHh
Q 006605 382 KILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKS 461 (639)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~ 461 (639)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCcccc
Q 006605 462 LGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQV 541 (639)
Q Consensus 462 ~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i 541 (639)
.+.+
T Consensus 177 ----------------------------------------------------------------------------~~~~ 180 (269)
T 1gci_A 177 ----------------------------------------------------------------------------NNNR 180 (269)
T ss_dssp ----------------------------------------------------------------------------TSCB
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 0023
Q ss_pred ccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCCCCCH
Q 006605 542 ALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEP 621 (639)
Q Consensus 542 a~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~~sp 621 (639)
+.||+|||. |||+|||++|+|+++ ++.|..++|||||||+|||++||+++++|.|||
T Consensus 181 ~~~S~~G~~-------------~di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~ 237 (269)
T 1gci_A 181 ASFSQYGAG-------------LDIVAPGVNVQSTYP----------GSTYASLNGTSMATPHVAGAAALVKQKNPSWSN 237 (269)
T ss_dssp CTTCCCSTT-------------EEEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHHHHHCTTCCH
T ss_pred CCCCCCCCC-------------cceEecCCCeEeecC----------CCCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 678999983 799999999999986 568999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccc
Q 006605 622 SCYKISIDDHNNEVG 636 (639)
Q Consensus 622 ~~i~~~~~~~~~~~~ 636 (639)
.|||..|.......|
T Consensus 238 ~~v~~~L~~tA~~~g 252 (269)
T 1gci_A 238 VQIRNHLKNTATSLG 252 (269)
T ss_dssp HHHHHHHHHTSBCCS
T ss_pred HHHHHHHHHhCccCC
Confidence 999999998776654
No 14
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=5e-45 Score=373.02 Aligned_cols=239 Identities=23% Similarity=0.335 Sum_probs=191.0
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
.+|.. +++|+||+|+|||||||++||+|+ +..+++|..+
T Consensus 15 ~~~~~----g~~G~gv~VaViDtGid~~h~~l~-------------------------------~~~g~~~~~~------ 53 (274)
T 1r0r_E 15 KVQAQ----GFKGANVKVAVLDTGIQASHPDLN-------------------------------VVGGASFVAG------ 53 (274)
T ss_dssp HHHHH----TCSCTTCEEEEEESCCCTTCTTCC-------------------------------EEEEEECSTT------
T ss_pred HHHhc----CCCCCCCEEEEEcCCCCCCCHhHc-------------------------------CCCCccccCC------
Confidence 45655 789999999999999999999995 2233444332
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhCCC
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~g~ 301 (639)
...+.|..+|||||||||+|..+. ..+.||||+|+|+.+|+++.++.+..+++++||+|++++++
T Consensus 54 ------~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~ 118 (274)
T 1r0r_E 54 ------EAYNTDGNGHGTHVAGTVAALDNT---------TGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGM 118 (274)
T ss_dssp ------CCTTCCSSSHHHHHHHHHHCCSSS---------SBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTC
T ss_pred ------CCCCCCCCCCHHHHHHHHHccCCC---------CceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCC
Confidence 123567899999999999996321 23689999999999999998777888999999999999999
Q ss_pred cEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCC----CCcccCCCccEEEceeecCcceeeeeE
Q 006605 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP----KTLVSYSPWITTVAAAIDDRRYKNHLN 377 (639)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~~~vitVgA~~~~~~~~~~~~ 377 (639)
+|||||||.... ...+..+++++.++|+++|+||||+|... ..+|+..+++|+|||++
T Consensus 119 ~Vin~S~G~~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~---------- 180 (274)
T 1r0r_E 119 DVINMSLGGASG--------STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD---------- 180 (274)
T ss_dssp SEEEECEEBSSC--------CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEEC----------
T ss_pred CEEEeCCCCCCC--------cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEec----------
Confidence 999999998432 46789999999999999999999998752 11222223333333210
Q ss_pred eCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHH
Q 006605 378 LGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSE 457 (639)
Q Consensus 378 ~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~ 457 (639)
T Consensus 181 -------------------------------------------------------------------------------- 180 (274)
T 1r0r_E 181 -------------------------------------------------------------------------------- 180 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCC
Q 006605 458 TAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKS 537 (639)
Q Consensus 458 ~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 537 (639)
.
T Consensus 181 ------------------------------------~------------------------------------------- 181 (274)
T 1r0r_E 181 ------------------------------------S------------------------------------------- 181 (274)
T ss_dssp ------------------------------------T-------------------------------------------
T ss_pred ------------------------------------C-------------------------------------------
Confidence 0
Q ss_pred ccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCC
Q 006605 538 APQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAP 617 (639)
Q Consensus 538 ~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p 617 (639)
.+.++.||+||| ||||+|||++|+++++ ++.|..++|||||||+|||++||+++++|
T Consensus 182 ~~~~~~~S~~G~-------------~~di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~p 238 (274)
T 1r0r_E 182 NSNRASFSSVGA-------------ELEVMAPGAGVYSTYP----------TNTYATLNGTSMASPHVAGAAALILSKHP 238 (274)
T ss_dssp TSCBCTTCCCST-------------TEEEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHHHHHST
T ss_pred CCCcCccCCCCC-------------CceEEeCCCCeEeecC----------CCCEEEeccHHHHHHHHHHHHHHHHHHCC
Confidence 013468999998 3899999999999986 56899999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcccccc
Q 006605 618 LLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 618 ~~sp~~i~~~~~~~~~~~~ 636 (639)
.|||.|||..|.......|
T Consensus 239 ~lt~~~v~~~L~~tA~~~g 257 (274)
T 1r0r_E 239 NLSASQVRNRLSSTATYLG 257 (274)
T ss_dssp TCCHHHHHHHHHHTCBCCS
T ss_pred CCCHHHHHHHHHHhCcccC
Confidence 9999999999998876554
No 15
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=1.5e-44 Score=370.56 Aligned_cols=240 Identities=23% Similarity=0.324 Sum_probs=190.1
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
.+|.. +++|+||+|||||||||++||+|+. ..+++|..+
T Consensus 15 ~~~~~----g~~G~gv~VaViDtGid~~h~~l~~-------------------------------~~g~~~~~~------ 53 (281)
T 1to2_E 15 ALHSQ----GYTGSNVKVAVIDSGIDSSHPDLKV-------------------------------AGGASMVPS------ 53 (281)
T ss_dssp HHHHH----TCSCTTCEEEEEESCCCTTCTTCCE-------------------------------EEEEECCTT------
T ss_pred HHHhc----CCCCCCCEEEEEcCCCCCCCHHHcC-------------------------------cCCccccCC------
Confidence 45655 7899999999999999999999962 223333321
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhCCC
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~g~ 301 (639)
+.....|..+|||||||||+|..+. ..+.||||+|+|+.+|+++.++.+..++++++|+|++++++
T Consensus 54 -----~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~ 119 (281)
T 1to2_E 54 -----ETNPFQDNNSHGTHVAGTVAALNNS---------IGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNM 119 (281)
T ss_dssp -----CCCTTCCSSSHHHHHHHHHHCCSSS---------SSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTC
T ss_pred -----CCCCCCCCCCcHHHHHHHHhccCCC---------CcceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCC
Confidence 0112357899999999999997321 23689999999999999998777888999999999999999
Q ss_pred cEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCC----CCcccCCCccEEEceeecCcceeeeeE
Q 006605 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP----KTLVSYSPWITTVAAAIDDRRYKNHLN 377 (639)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~~~vitVgA~~~~~~~~~~~~ 377 (639)
+|||||||.... ...+..+++++.++|++||+||||+|... ..+|+..+++|+|||++
T Consensus 120 ~Vin~S~G~~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~---------- 181 (281)
T 1to2_E 120 DVINMSLGGPSG--------SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVD---------- 181 (281)
T ss_dssp SEEEECEEBSCC--------CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEEC----------
T ss_pred cEEEECCcCCCC--------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEec----------
Confidence 999999997432 46889999999999999999999998752 11222223333333210
Q ss_pred eCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHH
Q 006605 378 LGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSE 457 (639)
Q Consensus 378 ~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~ 457 (639)
T Consensus 182 -------------------------------------------------------------------------------- 181 (281)
T 1to2_E 182 -------------------------------------------------------------------------------- 181 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCC
Q 006605 458 TAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKS 537 (639)
Q Consensus 458 ~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 537 (639)
.
T Consensus 182 ------------------------------------~------------------------------------------- 182 (281)
T 1to2_E 182 ------------------------------------S------------------------------------------- 182 (281)
T ss_dssp ------------------------------------T-------------------------------------------
T ss_pred ------------------------------------C-------------------------------------------
Confidence 0
Q ss_pred ccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCC
Q 006605 538 APQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAP 617 (639)
Q Consensus 538 ~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p 617 (639)
.+.++.||+|||. |||+|||++|+++++ ++.|..++|||||||+|||++||+++++|
T Consensus 183 ~~~~~~fS~~G~~-------------~di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~p 239 (281)
T 1to2_E 183 SNQRASFSSVGPE-------------LDVMAPGVSIQSTLP----------GNKYGAYNGTSMASPHVAGAAALILSKHP 239 (281)
T ss_dssp TSCBCTTCCCSTT-------------CCEEEECSSEEEEET----------TTEEEEECBHHHHHHHHHHHHHHHHHHST
T ss_pred CCCcCCcCCCCCC-------------ceEEecCCCeEeecC----------CCCEEecCcHHHHHHHHHHHHHHHHHhCC
Confidence 0134789999983 799999999999986 56899999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcccccc
Q 006605 618 LLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 618 ~~sp~~i~~~~~~~~~~~~ 636 (639)
.|||.|||..|.......|
T Consensus 240 ~lt~~~v~~~L~~tA~~~g 258 (281)
T 1to2_E 240 NWTNTQVRSSLENTTTKLG 258 (281)
T ss_dssp TCCHHHHHHHHHTTCBCCS
T ss_pred CCCHHHHHHHHHhhCcccC
Confidence 9999999999998776554
No 16
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=3.4e-44 Score=368.15 Aligned_cols=233 Identities=22% Similarity=0.288 Sum_probs=192.6
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
.+|.. +++|+||+|||||||||++||+|.++ +..+++|.++
T Consensus 20 ~aw~~----~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~~------ 60 (284)
T 1sh7_A 20 RNYNA----NFDGFGVTAYVIDTGVNNNHEEFGGR-----------------------------SVSGYDFVDN------ 60 (284)
T ss_dssp SBCCC----SCCCTTCEEEEEESCCCTTCTTTTTC-----------------------------EEEEEETTTT------
T ss_pred hhhhc----CCCCCCCEEEEEcCCCCCCChhHcCC-----------------------------ccccccccCC------
Confidence 46665 78999999999999999999999954 4555666543
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhC--
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD-- 299 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~-- 299 (639)
...+.|..+|||||||||+|. ..||||+|+|+.+|++++.+.++.+++++||+|++++
T Consensus 61 ------~~~~~d~~gHGT~vAgiia~~--------------~~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~ 120 (284)
T 1sh7_A 61 ------DADSSDCNGHGTHVAGTIGGS--------------QYGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNAS 120 (284)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCC
T ss_pred ------CCCCCCCCCcHHHHHHHHhcc--------------cCCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCC
Confidence 134678899999999999996 2599999999999999988778899999999999984
Q ss_pred CCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcccCCCccEEEceeecCcceeeeeEe
Q 006605 300 GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK-TLVSYSPWITTVAAAIDDRRYKNHLNL 378 (639)
Q Consensus 300 g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVgA~~~~~~~~~~~~~ 378 (639)
+++|||||||.. ....++.+++++.++|++||+||||+|.... .+|+..+++|+|||++.
T Consensus 121 ~~~Vin~S~G~~---------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 181 (284)
T 1sh7_A 121 GPSVANMSLGGG---------QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS---------- 181 (284)
T ss_dssp SSEEEEECCCBS---------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT----------
T ss_pred CCcEEEeCCCCC---------CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC----------
Confidence 799999999974 2468899999999999999999999986532 23444455555554210
Q ss_pred CCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHH
Q 006605 379 GNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSET 458 (639)
Q Consensus 379 g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~ 458 (639)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCc
Q 006605 459 AKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSA 538 (639)
Q Consensus 459 ~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 538 (639)
.
T Consensus 182 -------------------------------------------------------------------------------~ 182 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------S 182 (284)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCCC
Q 006605 539 PQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPL 618 (639)
Q Consensus 539 ~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~ 618 (639)
+.++.||+|||. |||+|||++|+++++ ++.|..++|||||||+|||++||+++++|.
T Consensus 183 ~~~~~~S~~G~~-------------~di~ApG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~ 239 (284)
T 1sh7_A 183 DSRSSFSNWGSC-------------VDLFAPGSQIKSAWY----------DGGYKTISGTSMATPHVAGVAALYLQENNG 239 (284)
T ss_dssp SBBCTTCCBSTT-------------CCEEEECSSEEEECT----------TSSEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcCcccCCCCc-------------cEEEeccCCeEEecC----------CCCEEEccChHHHHHHHHHHHHHHHHHCCC
Confidence 123689999984 699999999999986 568999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcccc
Q 006605 619 LEPSCYKISIDDHNNE 634 (639)
Q Consensus 619 ~sp~~i~~~~~~~~~~ 634 (639)
|||.|||.+|......
T Consensus 240 lt~~~v~~~L~~tA~~ 255 (284)
T 1sh7_A 240 LTPLQLTGLLNSRASE 255 (284)
T ss_dssp CCHHHHHHHHHHHSEE
T ss_pred CCHHHHHHHHHhhCcc
Confidence 9999999999976543
No 17
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=6.4e-45 Score=381.25 Aligned_cols=245 Identities=22% Similarity=0.243 Sum_probs=191.3
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
.+|.. +++|+||+|||||||||++||+|.++ +..+++|..+..
T Consensus 32 ~aw~~----~~~G~gv~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~~~~~---- 74 (327)
T 2x8j_A 32 AVWRA----SAKGAGQIIGVIDTGCQVDHPDLAER-----------------------------IIGGVNLTTDYG---- 74 (327)
T ss_dssp HHHHH----HGGGTTCEEEEEESCCCTTCTTTGGG-----------------------------EEEEEECSSGGG----
T ss_pred HHHhc----CCCCCCCEEEEEcCCCCCCChhHhhc-----------------------------ccCCccccCCCC----
Confidence 56766 68999999999999999999999854 555666655321
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHh---
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH--- 298 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~--- 298 (639)
.+...+.|..||||||||||+|..+ + .++.||||+|+|+.+|+++.++.+..+++++||+||++
T Consensus 75 ----~~~~~~~d~~gHGT~VAgiia~~~~-~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~ 141 (327)
T 2x8j_A 75 ----GDETNFSDNNGHGTHVAGTVAAAET-G--------SGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRG 141 (327)
T ss_dssp ----GCTTCCCCSSSHHHHHHHHHHCCCC-S--------SBCCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCC
T ss_pred ----CCCCCCCCCCCchHHHHHHHhccCC-C--------CCcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcc
Confidence 0112356889999999999999732 1 23789999999999999998777888999999999999
Q ss_pred ---CCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCC-----CCcccCCCccEEEceeecCc
Q 006605 299 ---DGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP-----KTLVSYSPWITTVAAAIDDR 370 (639)
Q Consensus 299 ---~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~~~~vitVgA~~~~~ 370 (639)
.+++|||||||... ....+..+++++.++|++||+||||+|... ..+|+..+++|+|||++.
T Consensus 142 ~~~~~~~Vin~S~G~~~--------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~-- 211 (327)
T 2x8j_A 142 PKGEQMRIITMSLGGPT--------DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDF-- 211 (327)
T ss_dssp TTSCCCSEEEECEEBSC--------CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECT--
T ss_pred cccCCceEEEECCCcCC--------CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECC--
Confidence 89999999999743 246788999999999999999999998652 122333344444443210
Q ss_pred ceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcc
Q 006605 371 RYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTA 450 (639)
Q Consensus 371 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~ 450 (639)
T Consensus 212 -------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 212 -------------------------------------------------------------------------------- 211 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCc
Q 006605 451 SIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGL 530 (639)
Q Consensus 451 ~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 530 (639)
T Consensus 212 -------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 212 -------------------------------------------------------------------------------- 211 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccce
Q 006605 531 MPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSC 610 (639)
Q Consensus 531 ~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~a 610 (639)
.+.++.||+||| ||||+|||++|+|+++ ++.|..++|||||||+|||++|
T Consensus 212 -------~~~~~~fS~~G~-------------~~di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~VaG~aA 261 (327)
T 2x8j_A 212 -------DLRLSDFTNTNE-------------EIDIVAPGVGIKSTYL----------DSGYAELSGTAMAAPHVAGALA 261 (327)
T ss_dssp -------TCCBSCC---CC-------------CCSEEEECSSEEEECS----------TTCEEEEESGGGTHHHHHHHHH
T ss_pred -------CCCCCCccCCCC-------------CceEecCcCceEeecC----------CCCEEeecCHHHHHHHHHHHHH
Confidence 013468899998 3899999999999986 5689999999999999999999
Q ss_pred ecccc-----CCCCCHHHHHHHHhhcccccc
Q 006605 611 SCEAE-----APLLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 611 l~~~~-----~p~~sp~~i~~~~~~~~~~~~ 636 (639)
|++++ +|.|||.|||..|.......|
T Consensus 262 ll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g 292 (327)
T 2x8j_A 262 LIINLAEDAFKRSLSETEIYAQLVRRATPIG 292 (327)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHHTTEECCS
T ss_pred HHHHhhhhhcCCCCCHHHHHHHHHHhCccCC
Confidence 99999 999999999999998766554
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=8.5e-45 Score=373.38 Aligned_cols=241 Identities=20% Similarity=0.172 Sum_probs=188.6
Q ss_pred CCCC-CceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhccCCCCCCCC
Q 006605 151 DRAG-EDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFA 229 (639)
Q Consensus 151 ~~~G-~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~ 229 (639)
.++| +||+|||||||||++||+|.++. +..+++... ....
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~-----------------------------~~~~~~~~~----------~~~~ 43 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD-----------------------------LTVLPTLAP----------TAAR 43 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE-----------------------------EEECCCSSC----------CCCC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe-----------------------------eecCcCCCC----------CCCC
Confidence 3678 69999999999999999999751 111222110 0112
Q ss_pred CCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCC-CCCHHHHHHHHHHHHhCCCcEEEecc
Q 006605 230 SPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLF-GGFVADVVAAIDQAVHDGVDILSLSV 308 (639)
Q Consensus 230 ~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~s~i~~ai~~a~~~g~dVIn~Sl 308 (639)
.+.|.+||||||||||+|+.+. .+.||||+|+|+.+|++.+.. ..+..++++||+|+++++++||||||
T Consensus 44 ~d~~~~gHGT~VAGiiag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~ 113 (282)
T 3zxy_A 44 SDGFMSAHGTHVASIIFGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISG 113 (282)
T ss_dssp TTCHHHHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCcccceeehhhccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccC
Confidence 2234679999999999997532 368999999999999996543 36778899999999999999999999
Q ss_pred CCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCccEEEceeecCcceeeeeEeCCCeEEEeec
Q 006605 309 GPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIG 388 (639)
Q Consensus 309 G~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~g~~~~~~~~~ 388 (639)
|..... ......++.+++++.++|+++|+||||+|.....+|+..+++|+|||++.+
T Consensus 114 G~~~~~----~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------- 170 (282)
T 3zxy_A 114 GELTDF----GEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH------------------- 170 (282)
T ss_dssp CEEESS----SCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT-------------------
T ss_pred cccccc----ccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC-------------------
Confidence 975432 223567889999999999999999999998766666666777777663211
Q ss_pred cCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHHHHhcCCeEEE
Q 006605 389 LSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFV 468 (639)
Q Consensus 389 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~~Ga~gvi 468 (639)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCccccccccCCC
Q 006605 469 LAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARG 548 (639)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ia~FSS~G 548 (639)
+.++.||+||
T Consensus 171 ----------------------------------------------------------------------~~~~~~S~~~ 180 (282)
T 3zxy_A 171 ----------------------------------------------------------------------GHPLDFSNWG 180 (282)
T ss_dssp ----------------------------------------------------------------------SCBCSSSCCC
T ss_pred ----------------------------------------------------------------------CccccccCCC
Confidence 0124567776
Q ss_pred CCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccC----CCCCHHHH
Q 006605 549 PNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEA----PLLEPSCY 624 (639)
Q Consensus 549 Pt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~----p~~sp~~i 624 (639)
+ ...||||+|||.+|+|+++ ++.|..++|||||||||||++||+++++ |.|+|+||
T Consensus 181 ~----------~~~~~di~ApG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~v 240 (282)
T 3zxy_A 181 S----------TYEQQGILAPGEDILGAKP----------GGGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKV 240 (282)
T ss_dssp H----------HHHHHEEEEECSSEEEECT----------TSCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred C----------CccccceeccCcceeeecC----------CCceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHH
Confidence 6 3478999999999999986 6689999999999999999999999874 88999999
Q ss_pred HHHHhhccc
Q 006605 625 KISIDDHNN 633 (639)
Q Consensus 625 ~~~~~~~~~ 633 (639)
|.+|.+-..
T Consensus 241 k~~L~~tA~ 249 (282)
T 3zxy_A 241 RQLLLQSAL 249 (282)
T ss_dssp HHHHHHHCB
T ss_pred HHHHHhhCe
Confidence 999987543
No 19
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=5e-46 Score=394.57 Aligned_cols=278 Identities=15% Similarity=0.088 Sum_probs=175.0
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhH-----
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAA----- 216 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~----- 216 (639)
.+|.. +..|++|+|||||||||++||+|++..... ....|++..+.... .......+.++.
T Consensus 22 ~~w~~----~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 87 (357)
T 4h6x_A 22 DLHNQ----TLGDPQITIVIIDGDPDYTLSCFEGAEVSK--VFPYWHEPAEPITP--------EDYAAFQSIRDQGLKGK 87 (357)
T ss_dssp HHHHH----CSCCTTSEEEEEESCCCTTSGGGTTCEEEE--CCCTTSCCCCCCCH--------HHHHHHHHHHHHTCCSH
T ss_pred HHHHh----cCCCCCCEEEEEcCCCCCCChhHcCCCccc--ccccccccccccCc--------ccccccccccCcccccc
Confidence 56776 577899999999999999999999763211 11145443321100 000000000000
Q ss_pred -hhhccCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCC-----CCCHHHHH
Q 006605 217 -IAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLF-----GGFVADVV 290 (639)
Q Consensus 217 -~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-----~~~~s~i~ 290 (639)
..........+..++.|.+||||||||||+|+.+. ++.||||+|+|+.+|++.... .....+++
T Consensus 88 ~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~ 157 (357)
T 4h6x_A 88 EKEEALEAVIPDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLA 157 (357)
T ss_dssp HHHHHHHHHCTTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHH
T ss_pred ccccccccccCCCCCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHH
Confidence 00000001112234557789999999999997432 368999999999999975421 13345689
Q ss_pred HHHHHHHhCCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCccEEEceeecCc
Q 006605 291 AAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDR 370 (639)
Q Consensus 291 ~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~ 370 (639)
+|++|++++|++|||||||..... ....+.+..+++++.++|+++|+||||+|.....+|+..++||+|||++.+
T Consensus 158 ~ai~~a~~~g~~Vin~S~G~~~~~----~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~- 232 (357)
T 4h6x_A 158 RAIDLALELGANIIHCAFCRPTQT----SEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD- 232 (357)
T ss_dssp HHHHHHHHTTCSEEEEC---------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT-
T ss_pred HHHHHHHHcCCCEEeeccccCCcc----ccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC-
Confidence 999999999999999999976543 234678899999999999999999999997766666666667766653100
Q ss_pred ceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcc
Q 006605 371 RYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTA 450 (639)
Q Consensus 371 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~ 450 (639)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCc
Q 006605 451 SIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGL 530 (639)
Q Consensus 451 ~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 530 (639)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccce
Q 006605 531 MPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSC 610 (639)
Q Consensus 531 ~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~a 610 (639)
+.++.||+||+. ..||||+|||++|+|+++ .++.|..++|||||||||||++|
T Consensus 233 --------~~~~~fSn~G~~----------~~~~di~APG~~i~s~~~---------~~~~~~~~sGTS~AaP~vaG~~A 285 (357)
T 4h6x_A 233 --------GTPCHFSNWGGN----------NTKEGILAPGEEILGAQP---------CTEEPVRLTGTSMAAPVMTGISA 285 (357)
T ss_dssp --------SSBCTTCC---C----------TTTTEEEEECSSEEECCT---------TCSCCEEECSHHHHHHHHHHHHH
T ss_pred --------CcccccccCCCC----------CCccceeecCCCeEeccC---------CCCcccccCcHHHHHHHHHHHHH
Confidence 123689999984 469999999999999987 24567789999999999999999
Q ss_pred ecc----ccCCCCCHHHHHHHHhhccccc
Q 006605 611 SCE----AEAPLLEPSCYKISIDDHNNEV 635 (639)
Q Consensus 611 l~~----~~~p~~sp~~i~~~~~~~~~~~ 635 (639)
|++ +.+|.|||+|||.+|++.-..+
T Consensus 286 ll~s~~~~~~~~lt~~~v~~~L~~tA~~~ 314 (357)
T 4h6x_A 286 LLMSLQVQQGKPVDAEAVRTALLKTAIPC 314 (357)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHC----
T ss_pred HHHHhhHhhCCCCCHHHHHHHHHhhCccC
Confidence 998 5567899999999999875543
No 20
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=9.3e-44 Score=364.37 Aligned_cols=234 Identities=23% Similarity=0.280 Sum_probs=190.9
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
..|.. +++|+||+|||||||||++||+|.++ +..+++|.++
T Consensus 22 ~~~~~----~~~G~gv~VaViDtGid~~Hpdl~~~-----------------------------~~~~~d~~~~------ 62 (278)
T 2b6n_A 22 NNYHT----DYDGSGVTAFVIDTGVLNTHNEFGGR-----------------------------ASSGYDFIDN------ 62 (278)
T ss_dssp SEEEC----SCCCTTCEEEEEESCCCTTCGGGTTC-----------------------------EEEEEETTTT------
T ss_pred hhccc----CCCCCCCEEEEEeCCCCCCChhHhcc-----------------------------cccCeecCCC------
Confidence 45665 78999999999999999999999864 4455666542
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHh--C
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH--D 299 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~--~ 299 (639)
..++.|..+|||||||||+|. ..||||+|+|+.+|++++.+.+..+++++||+|+++ .
T Consensus 63 ------~~~~~d~~gHGT~vAgiia~~--------------~~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~ 122 (278)
T 2b6n_A 63 ------DYDATDCNGHGTHVAGTIGGS--------------TYGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNAS 122 (278)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCC
T ss_pred ------CCCCCCCCCcHHHHHHHHHCC--------------CcCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCC
Confidence 234678899999999999986 369999999999999998877889999999999998 5
Q ss_pred CCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCC-cccCCCccEEEceeecCcceeeeeEe
Q 006605 300 GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKT-LVSYSPWITTVAAAIDDRRYKNHLNL 378 (639)
Q Consensus 300 g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~~~vitVgA~~~~~~~~~~~~~ 378 (639)
+++|||||||... ...+..+++++.++|++||+||||+|...+. +|+..+++|+|||++.
T Consensus 123 g~~Vin~S~G~~~---------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 183 (278)
T 2b6n_A 123 GPAVANMSLGGGA---------SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS---------- 183 (278)
T ss_dssp SSEEEEECCCEEC---------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------
T ss_pred CCeEEEECCCCCc---------CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC----------
Confidence 9999999999742 4678899999999999999999999865321 2333444444444210
Q ss_pred CCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHH
Q 006605 379 GNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSET 458 (639)
Q Consensus 379 g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~ 458 (639)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCc
Q 006605 459 AKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSA 538 (639)
Q Consensus 459 ~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 538 (639)
.
T Consensus 184 -------------------------------------------------------------------------------~ 184 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------N 184 (278)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCCC
Q 006605 539 PQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPL 618 (639)
Q Consensus 539 ~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~ 618 (639)
+.++.||+|||. |||+|||++|+++++.. ++.|..++|||||||+|||++||+++++|.
T Consensus 185 ~~~~~~S~~G~~-------------~di~ApG~~i~s~~~~~--------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~ 243 (278)
T 2b6n_A 185 DSRSSFSNYGTC-------------LDIYAPGSSITSSWYTS--------NSATNTISGTSMASPHVAGVAALYLDENPN 243 (278)
T ss_dssp SBBCTTCCBSTT-------------CCEEEECSSEEEECTTS--------TTCEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcCCcCCCCCC-------------CeEEeCCCCeECcccCC--------CCCEEEeCcHHHHHHHHHHHHHHHHHhCCC
Confidence 123678888873 79999999999998632 468999999999999999999999999999
Q ss_pred CCHHHHHHHHhhccc
Q 006605 619 LEPSCYKISIDDHNN 633 (639)
Q Consensus 619 ~sp~~i~~~~~~~~~ 633 (639)
|||.|||..|.....
T Consensus 244 lt~~~v~~~L~~tA~ 258 (278)
T 2b6n_A 244 LSPAQVTNLLKTRAT 258 (278)
T ss_dssp CCHHHHHHHHHHHSE
T ss_pred CCHHHHHHHHHHhCc
Confidence 999999999987654
No 21
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1.2e-43 Score=371.02 Aligned_cols=244 Identities=21% Similarity=0.298 Sum_probs=197.3
Q ss_pred CCCCCCCCCCCCCCC--ceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhh
Q 006605 141 TGVWPTGGGFDRAGE--DIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIA 218 (639)
Q Consensus 141 ~~~w~~~~~~~~~G~--gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~ 218 (639)
+.+|.. + +|+ ||+|||||||||++||+|.++ +..+++|.++..
T Consensus 18 ~~aw~~----~-~G~~~gv~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~~~~~- 62 (320)
T 2z30_A 18 PSVWSI----T-DGSVSVIQVAVLDTGVDYDHPDLAAN-----------------------------IAWCVSTLRGKV- 62 (320)
T ss_dssp GGGTTT----C-CSCCTTCEEEEEESCBCTTCTTTGGG-----------------------------EEEEEECGGGCC-
T ss_pred HHHHHh----c-CCCcCCeEEEEECCCCCCCChhHhcc-----------------------------cccCccccCCcc-
Confidence 467876 3 899 999999999999999999954 455555554310
Q ss_pred hccCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHh
Q 006605 219 ARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH 298 (639)
Q Consensus 219 ~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~ 298 (639)
..+.....|..||||||||||+|..+ + ..+.||||+|+|+.+|+++..+.+..+++++||+||++
T Consensus 63 ------~~~~~~~~d~~gHGT~vAgiia~~~n-~--------~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~ 127 (320)
T 2z30_A 63 ------STKLRDCADQNGHGTHVIGTIAALNN-D--------IGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAIL 127 (320)
T ss_dssp ------BCCHHHHBCSSSHHHHHHHHHHCCSS-S--------BSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCCCCCHHHHHHHHHcccC-C--------CceEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHh
Confidence 00011235789999999999999632 1 23689999999999999998777889999999999998
Q ss_pred C--------------------CCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCC
Q 006605 299 D--------------------GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSP 358 (639)
Q Consensus 299 ~--------------------g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~ 358 (639)
+ +++|||||||... ....+..+++++.++|++||+||||+|.....+|+..+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~--------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~ 199 (320)
T 2z30_A 128 GPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA--------DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYP 199 (320)
T ss_dssp TTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC--------CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTST
T ss_pred CcccccccccccccccccccCCceEEEecCCCCC--------CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCC
Confidence 7 9999999999843 24678899999999999999999999987666666667
Q ss_pred ccEEEceeecCcceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEE
Q 006605 359 WITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILL 438 (639)
Q Consensus 359 ~vitVgA~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl 438 (639)
+||+|||++.+
T Consensus 200 ~vi~Vga~~~~--------------------------------------------------------------------- 210 (320)
T 2z30_A 200 EVIAVGAIDSN--------------------------------------------------------------------- 210 (320)
T ss_dssp TEEEEEEECTT---------------------------------------------------------------------
T ss_pred CeEEEEeeCCC---------------------------------------------------------------------
Confidence 77777763200
Q ss_pred EeeecccccCcchhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCcccee
Q 006605 439 CGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVK 518 (639)
Q Consensus 439 ~~r~~~~~~g~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~ 518 (639)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecceeEEEccCcccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeee
Q 006605 519 SFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWN 598 (639)
Q Consensus 519 ~~~~~~~i~~~~~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGT 598 (639)
+.++.||+||| +|+|||++|+|+++ ++.|..++||
T Consensus 211 --------------------~~~~~~S~~g~---------------~v~APG~~i~s~~~----------~~~~~~~sGT 245 (320)
T 2z30_A 211 --------------------DNIASFSNRQP---------------EVSAPGVDILSTYP----------DDSYETLMGT 245 (320)
T ss_dssp --------------------SCBCTTSCSSC---------------SEEEECSSEEEEET----------TTEEEEECSH
T ss_pred --------------------CCcCcccCCCC---------------CEEeCCCCeEEecc----------CCCeEeccCH
Confidence 02257888876 46999999999986 5689999999
Q ss_pred ccccccccccceeccccC-------------CCCCHHHHHHHHhhcccccc
Q 006605 599 QYGCTTYSRDSCSCEAEA-------------PLLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 599 SmAaP~vaG~~al~~~~~-------------p~~sp~~i~~~~~~~~~~~~ 636 (639)
|||||||||++||+++++ |.|+|.|||..|.......+
T Consensus 246 S~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~ 296 (320)
T 2z30_A 246 AMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLG 296 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCS
T ss_pred HHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhCccCC
Confidence 999999999999999999 99999999999998776654
No 22
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=3.1e-43 Score=360.50 Aligned_cols=234 Identities=21% Similarity=0.250 Sum_probs=191.3
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
.+|.. +++|+||+|||||||||++||+|.++ +..+++|..
T Consensus 22 ~a~~~----~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~------- 61 (276)
T 4dzt_A 22 NSYTY----TATGRGVNVYVIDTGIRTTHREFGGR-----------------------------ARVGYDALG------- 61 (276)
T ss_dssp SCEEC----SCCCTTCEEEEEESCCCTTCGGGTTC-----------------------------EEEEEETTS-------
T ss_pred cceec----CCCCCCcEEEEEccCCCCCChhHccC-----------------------------eeccccCCC-------
Confidence 45665 78999999999999999999999865 444444433
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhC--
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD-- 299 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~-- 299 (639)
..+.|.+||||||||||+|. ..||||+|+|+.+|++++++.+..++++++++|++++
T Consensus 62 -------~~~~d~~gHGT~vAgiiag~--------------~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~ 120 (276)
T 4dzt_A 62 -------GNGQDCNGHGTHVAGTIGGV--------------TYGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHR 120 (276)
T ss_dssp -------SCSCCSSSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCC
T ss_pred -------CCCCCCCCCHHHHHHHHHcc--------------ccCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCC
Confidence 24567899999999999986 3699999999999999988888999999999999987
Q ss_pred CCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCc-ccCCCccEEEceeecCcceeeeeEe
Q 006605 300 GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTL-VSYSPWITTVAAAIDDRRYKNHLNL 378 (639)
Q Consensus 300 g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~-~~~~~~vitVgA~~~~~~~~~~~~~ 378 (639)
+++|||||||.. ....+..+++++.++|+++|+||||+|...... |+..+++|+|||++.
T Consensus 121 ~~~vin~S~g~~---------~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 181 (276)
T 4dzt_A 121 RPAVANMSLGGG---------VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS---------- 181 (276)
T ss_dssp SSEEEEECCCEE---------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------
T ss_pred CCeEEEECCCCC---------CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC----------
Confidence 999999999963 246889999999999999999999998653222 333344444443110
Q ss_pred CCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHH
Q 006605 379 GNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSET 458 (639)
Q Consensus 379 g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~ 458 (639)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCc
Q 006605 459 AKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSA 538 (639)
Q Consensus 459 ~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 538 (639)
.
T Consensus 182 -------------------------------------------------------------------------------~ 182 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------S 182 (276)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCCC
Q 006605 539 PQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPL 618 (639)
Q Consensus 539 ~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~ 618 (639)
+.++.||+|||. +||+|||++|+++++.. +..|..++|||||||+|||++||+++++|.
T Consensus 183 ~~~~~~S~~g~~-------------~dv~ApG~~i~s~~~~~--------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~ 241 (276)
T 4dzt_A 183 DARASFSNYGSC-------------VDLFAPGASIPSAWYTS--------DTATQTLNGTSMATPHVAGVAALYLEQNPS 241 (276)
T ss_dssp SBBCTTCCBSTT-------------CCEEEECSSEEEECTTS--------SSCEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcCCcCCCCCC-------------ceEEeCCCCeEccccCC--------CCceEEeeEHHHHHHHHHHHHHHHHHHCCC
Confidence 133689999984 58999999999998632 457999999999999999999999999999
Q ss_pred CCHHHHHHHHhhccccc
Q 006605 619 LEPSCYKISIDDHNNEV 635 (639)
Q Consensus 619 ~sp~~i~~~~~~~~~~~ 635 (639)
|+|+|||..|.+.....
T Consensus 242 lt~~~v~~~L~~tA~~~ 258 (276)
T 4dzt_A 242 ATPASVASAILNGATTG 258 (276)
T ss_dssp CCHHHHHHHHHHHSEES
T ss_pred CCHHHHHHHHHhhCcCC
Confidence 99999999999876543
No 23
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=2.8e-43 Score=360.46 Aligned_cols=223 Identities=24% Similarity=0.284 Sum_probs=185.7
Q ss_pred CCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhccCCCCCCCCCC
Q 006605 152 RAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASP 231 (639)
Q Consensus 152 ~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (639)
.+|+||+|+|||||||++||+|.++ +..+++|.+ .+
T Consensus 28 ~~G~gv~VaViDsGvd~~H~~l~~~-----------------------------~~~~~~~~~---------------~~ 63 (279)
T 2pwa_A 28 SAGQGSCVYVIDTGIEASHPEFEGR-----------------------------AQMVKTYYY---------------SS 63 (279)
T ss_dssp TTTTTEEEEEEESCCCTTCGGGTTC-----------------------------EEEEEESSS---------------CS
T ss_pred CCCCCCEEEEEeCCCCCCChhHhCc-----------------------------cccccCCCC---------------CC
Confidence 7899999999999999999999864 444455531 24
Q ss_pred CCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhCCC-------cEE
Q 006605 232 LDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV-------DIL 304 (639)
Q Consensus 232 ~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~g~-------dVI 304 (639)
.|..+|||||||||+|. ..||||+|+|+.+|++++++.++.+++++||+|++++++ +||
T Consensus 64 ~d~~gHGT~vAgiia~~--------------~~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vi 129 (279)
T 2pwa_A 64 RDGNGHGTHCAGTVGSR--------------TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVA 129 (279)
T ss_dssp SCSSSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEE
T ss_pred CCCCCCHHHHHHHHHhc--------------ccccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEE
Confidence 67899999999999996 369999999999999998877899999999999999877 999
Q ss_pred EeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcccCCCccEEEceeecCcceeeeeEeCCCeE
Q 006605 305 SLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK-TLVSYSPWITTVAAAIDDRRYKNHLNLGNGKI 383 (639)
Q Consensus 305 n~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVgA~~~~~~~~~~~~~g~~~~ 383 (639)
|||||.. ....+..+++++.++|++||+||||+|.+.. .+|+..+++|+|||++.
T Consensus 130 n~S~G~~---------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------- 185 (279)
T 2pwa_A 130 SLSLGGG---------YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR--------------- 185 (279)
T ss_dssp EECCCEE---------CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------------
T ss_pred EecCCCC---------CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC---------------
Confidence 9999963 2468899999999999999999999987532 23344455555554210
Q ss_pred EEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHHHHhcC
Q 006605 384 LAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLG 463 (639)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~~G 463 (639)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCcccccc
Q 006605 464 AAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVAL 543 (639)
Q Consensus 464 a~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ia~ 543 (639)
.+.++.
T Consensus 186 --------------------------------------------------------------------------~~~~~~ 191 (279)
T 2pwa_A 186 --------------------------------------------------------------------------YDRRSS 191 (279)
T ss_dssp --------------------------------------------------------------------------TSBBCT
T ss_pred --------------------------------------------------------------------------CCCcCC
Confidence 012368
Q ss_pred ccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCCCCCHHH
Q 006605 544 FSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSC 623 (639)
Q Consensus 544 FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~~sp~~ 623 (639)
||+|||. |||+|||++|+|+++ ++.|..++|||||||+|||++||++++ |.|||.|
T Consensus 192 ~S~~G~~-------------~di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~ 247 (279)
T 2pwa_A 192 FSNYGSV-------------LDIFGPGTDILSTWI----------GGSTRSISGTSMATPHVAGLAAYLMTL-GKTTAAS 247 (279)
T ss_dssp TCCBSTT-------------CCEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTT
T ss_pred cCCCCCc-------------ceEEEecCCeEEeec----------CCCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHH
Confidence 9999983 799999999999996 558999999999999999999999999 9999999
Q ss_pred HHHHHhhcccc
Q 006605 624 YKISIDDHNNE 634 (639)
Q Consensus 624 i~~~~~~~~~~ 634 (639)
||..|......
T Consensus 248 v~~~L~~tA~~ 258 (279)
T 2pwa_A 248 ACRYIADTANK 258 (279)
T ss_dssp HHHHHHHHSEE
T ss_pred HHHHHHHhCcc
Confidence 99999876543
No 24
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1.3e-43 Score=369.15 Aligned_cols=249 Identities=20% Similarity=0.230 Sum_probs=191.8
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
.+|+. ...++||+|||||||||++||+|.++. +....++..+
T Consensus 12 ~aW~~----~~G~~gV~VaViDtGid~~Hpdl~g~~----------------------------~~~~~~~~~~------ 53 (306)
T 4h6w_A 12 KLWSE----TRGDPKICVAVLDGIVDQNHPCFIGAD----------------------------LTRLPSLVSG------ 53 (306)
T ss_dssp HHHHH----CSCCTTCEEEEESSCCCTTSGGGTTCE----------------------------EEECC-----------
T ss_pred HHHhh----hCCCCCCEEEEEcCCCCCCChhHcCCc----------------------------ccCCCcccCC------
Confidence 57876 345589999999999999999999761 2222333222
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecC-CCCCHHHHHHHHHHHHhCC
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRL-FGGFVADVVAAIDQAVHDG 300 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~-~~~~~s~i~~ai~~a~~~g 300 (639)
+.....|.++|||||||||+|+.+. .+.||||+|+|+.+|++.+. +.....++++||+|+++++
T Consensus 54 -----~~~~~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g 118 (306)
T 4h6w_A 54 -----EANANGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNG 118 (306)
T ss_dssp ----------CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTT
T ss_pred -----CCCCCCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHhhccc
Confidence 1122346789999999999997432 36899999999999999654 3467888999999999999
Q ss_pred CcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCccEEEceeecCcceeeeeEeCC
Q 006605 301 VDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGN 380 (639)
Q Consensus 301 ~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~g~ 380 (639)
++|||+|||..... ......++.+++++.++|+++|+||||+|.....+|+..+++|+|||++..
T Consensus 119 ~~vi~~s~g~~~~~----~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~----------- 183 (306)
T 4h6w_A 119 ANIINVSAGQLTDA----GEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ----------- 183 (306)
T ss_dssp CSEEEECCCEEESS----SCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT-----------
T ss_pred ceeeeccccccccC----CCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC-----------
Confidence 99999999974432 223567899999999999999999999997655555555666666553210
Q ss_pred CeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHHHH
Q 006605 381 GKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAK 460 (639)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~ 460 (639)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCccc
Q 006605 461 SLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQ 540 (639)
Q Consensus 461 ~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 540 (639)
+.
T Consensus 184 ------------------------------------------------------------------------------~~ 185 (306)
T 4h6w_A 184 ------------------------------------------------------------------------------GK 185 (306)
T ss_dssp ------------------------------------------------------------------------------SC
T ss_pred ------------------------------------------------------------------------------CC
Confidence 01
Q ss_pred cccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccc----cC
Q 006605 541 VALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEA----EA 616 (639)
Q Consensus 541 ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~----~~ 616 (639)
+++||+||+ ...||||+|||++|+|+++ ++.|..++|||||||||||++||+++ .+
T Consensus 186 ~~~~s~~g~----------~~~~~di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~VaG~~All~s~~~~~~ 245 (306)
T 4h6w_A 186 PVDFSNWGD----------AYQKQGILAPGKDILGAKP----------NGGTIRLSGTSFATPIVSGVAALLLSLQIKRG 245 (306)
T ss_dssp BCSSSCBCH----------HHHHHEEEEECSSEEEECT----------TSCEEEECSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccC----------CcCcceeecCCcCcccccC----------CCceeccCCCcchhHHHHHHHHHHHHHHHhhC
Confidence 245667776 3468999999999999986 66899999999999999999999975 56
Q ss_pred CCCCHHHHHHHHhhcccccc
Q 006605 617 PLLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 617 p~~sp~~i~~~~~~~~~~~~ 636 (639)
|.|||+|||.+|.+...+++
T Consensus 246 p~~t~~~v~~~L~~tA~~~~ 265 (306)
T 4h6w_A 246 EKPDPQKVKNALLASATPCN 265 (306)
T ss_dssp CCCCHHHHHHHHHHTCBCCC
T ss_pred CCCCHHHHHHHHHhhCccCC
Confidence 99999999999998766543
No 25
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.1e-42 Score=378.85 Aligned_cols=267 Identities=22% Similarity=0.274 Sum_probs=204.5
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecC------CCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhh
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYP------HHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEA 215 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~------~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~ 215 (639)
.+|.. .+++|+||+|||||||||. +||+|.++ +...++|.+.
T Consensus 12 ~~~~~---~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~-----------------------------i~~~~~~~~~ 59 (434)
T 1wmd_A 12 VAQSS---YGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK-----------------------------ITALYALGRT 59 (434)
T ss_dssp HHHHH---HCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC-----------------------------EEEEEETTTT
T ss_pred hhhhc---cCCCCcccEEEEEecCcCCCCCCcccCcccCCC-----------------------------EeeeccccCC
Confidence 45652 2689999999999999999 79999854 4455555432
Q ss_pred HhhhccCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCC--CHHHHHHHH
Q 006605 216 AIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGG--FVADVVAAI 293 (639)
Q Consensus 216 ~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~--~~s~i~~ai 293 (639)
..+.|..||||||||||+|+.. .+.||||+|+|+.+|+++..+.. ..+++.++|
T Consensus 60 -------------~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai 115 (434)
T 1wmd_A 60 -------------NNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLF 115 (434)
T ss_dssp -------------TCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHH
T ss_pred -------------CCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCccccccHHHHHHH
Confidence 3567889999999999999632 25799999999999999876443 456799999
Q ss_pred HHHHhCCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHH-HhCCcEEEEecCCCCCCC--CCcccCCCccEEEceeecCc
Q 006605 294 DQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAA-VKAGVFVAQAAGNGGPFP--KTLVSYSPWITTVAAAIDDR 370 (639)
Q Consensus 294 ~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~~~--~~~~~~~~~vitVgA~~~~~ 370 (639)
+|++++|++|||||||..... ......++++++ .++|+++|+||||+|... ...|+.++++|+|||++..+
T Consensus 116 ~~a~~~g~~Vin~S~G~~~~~------~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~ 189 (434)
T 1wmd_A 116 SQAYSAGARIHTNSWGAAVNG------AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLR 189 (434)
T ss_dssp HHHHHTTCSEEEECCCBCCTT------CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSC
T ss_pred HHHHhcCCeEEEecCCCCcCC------cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccC
Confidence 999999999999999985421 123556677666 589999999999999864 34567789999999975321
Q ss_pred ceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcc
Q 006605 371 RYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTA 450 (639)
Q Consensus 371 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~ 450 (639)
. . + +..
T Consensus 190 ~-----------------------------------------------------~---------------~------~~~ 195 (434)
T 1wmd_A 190 P-----------------------------------------------------S---------------F------GSY 195 (434)
T ss_dssp G-----------------------------------------------------G---------------G------CGG
T ss_pred c-----------------------------------------------------c---------------c------Ccc
Confidence 0 0 0 000
Q ss_pred hhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCc
Q 006605 451 SIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGL 530 (639)
Q Consensus 451 ~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 530 (639)
.
T Consensus 196 ---------------------------------------------~---------------------------------- 196 (434)
T 1wmd_A 196 ---------------------------------------------A---------------------------------- 196 (434)
T ss_dssp ---------------------------------------------G----------------------------------
T ss_pred ---------------------------------------------c----------------------------------
Confidence 0
Q ss_pred ccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCC--CcCCCceEEEeeecccccccccc
Q 006605 531 MPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEA--NFVGKRICLDIWNQYGCTTYSRD 608 (639)
Q Consensus 531 ~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~--~~~~~~y~~~sGTSmAaP~vaG~ 608 (639)
...+.++.||+|||+.+ +++||||+|||++|+|+++....... ...++.|..++|||||||||||+
T Consensus 197 -----~~~~~~a~fS~~G~~~~-------g~~kpdi~ApG~~i~s~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~ 264 (434)
T 1wmd_A 197 -----DNINHVAQFSSRGPTKD-------GRIKPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYMGGTSMATPIVAGN 264 (434)
T ss_dssp -----SCTTSBCTTSCCCCCTT-------SCCCCCEEEECSSEEEECCTTCCGGGSSEEEETTEEEECSHHHHHHHHHHH
T ss_pred -----CCCCccccccCCCCCCC-------CCCCceEEcCCCCeEecCCCCCCCcccccCCCCceEeecchhHHHHHHHHH
Confidence 00124589999999985 99999999999999999864321100 01256899999999999999999
Q ss_pred ceeccccCCCC-----CHHHHHHHHhhccccc
Q 006605 609 SCSCEAEAPLL-----EPSCYKISIDDHNNEV 635 (639)
Q Consensus 609 ~al~~~~~p~~-----sp~~i~~~~~~~~~~~ 635 (639)
+||++|++|++ +|++||.+|.+...+.
T Consensus 265 aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~ 296 (434)
T 1wmd_A 265 VAQLREHFVKNRGITPKPSLLKAALIAGAADI 296 (434)
T ss_dssp HHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCC
T ss_pred HHHHHHHHHhccCCCCCHHHHHHHHHcCCccc
Confidence 99999999876 9999999998876553
No 26
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=5.4e-43 Score=370.63 Aligned_cols=251 Identities=16% Similarity=0.084 Sum_probs=190.0
Q ss_pred CCCCCCCCCCCCCC--ceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhh
Q 006605 142 GVWPTGGGFDRAGE--DIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAA 219 (639)
Q Consensus 142 ~~w~~~~~~~~~G~--gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~ 219 (639)
.+|.. ++|+ ||+||||||||| +||+|.++ +..+++|.++.
T Consensus 34 ~aw~~-----~~G~~~gv~VaViDsGid-~Hp~l~~~-----------------------------~~~~~~~~~~~--- 75 (347)
T 2iy9_A 34 ETTMS-----LTDKNTPVVVSVVDSGVA-FIGGLSDS-----------------------------EFAKFSFTQDG--- 75 (347)
T ss_dssp HHHHH-----TSCTTSCCEEEEEESCCC-CCGGGTTC-----------------------------EEEEEECBTTC---
T ss_pred HHHHH-----hcCCCCCCEEEEEcCCCc-CChhhhcC-----------------------------cccCCcccCCC---
Confidence 56665 6899 999999999999 99999864 44555555420
Q ss_pred ccCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhC
Q 006605 220 RAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD 299 (639)
Q Consensus 220 ~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~ 299 (639)
.......+.|..||||||||||+|.. ++.||||+|+|+.+|++++.+.. ++++||+||+++
T Consensus 76 ----~~~~~~~~~d~~gHGT~vAgiia~~~------------g~~GvAp~a~l~~~~v~~~~~~~---~~~~ai~~a~~~ 136 (347)
T 2iy9_A 76 ----SPFPVKKSEALYIHGTAMASLIASRY------------GIYGVYPHALISSRRVIPDGVQD---SWIRAIESIMSN 136 (347)
T ss_dssp ----CSSCCSSSHHHHHHHHHHHHHHHCSS------------SSCCSSTTCEEEEEECCSSBCTT---HHHHHHHHHHTC
T ss_pred ----CCCCCCCCCCCCCcHHHHHHHHhccc------------CCcccCCCCEEEEEEEecCCCHH---HHHHHHHHHHhh
Confidence 00111245678899999999999971 26899999999999999875333 899999999999
Q ss_pred ------CCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-------CcccCCC--------
Q 006605 300 ------GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK-------TLVSYSP-------- 358 (639)
Q Consensus 300 ------g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-------~~~~~~~-------- 358 (639)
+++|||||||.... ......+..+++++.++|++||+||||+|.... .+|+..+
T Consensus 137 ~~~~~~~~~Vin~S~G~~~~-----~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~ 211 (347)
T 2iy9_A 137 VFLAPGEEKIINISGGQKGV-----ASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKK 211 (347)
T ss_dssp TTSCTTEEEEEEESSCBCCC------CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHH
T ss_pred hhcccCCceEEEeccccCCC-----CCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccc
Confidence 99999999997532 123578899999999999999999999997532 2222222
Q ss_pred --ccEEEceeecCcceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccE
Q 006605 359 --WITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNI 436 (639)
Q Consensus 359 --~vitVgA~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gki 436 (639)
++|+|||++..
T Consensus 212 ~~~vi~Vga~~~~------------------------------------------------------------------- 224 (347)
T 2iy9_A 212 QDPVIRVAALAQY------------------------------------------------------------------- 224 (347)
T ss_dssp TCCEEEEEEECCC-------------------------------------------------------------------
T ss_pred cCCEEEEEEcccC-------------------------------------------------------------------
Confidence 33333322110
Q ss_pred EEEeeecccccCcchhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccc
Q 006605 437 LLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGR 516 (639)
Q Consensus 437 vl~~r~~~~~~g~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~ 516 (639)
.++ +
T Consensus 225 -----------------------------------------------------------~~g-----------------~ 228 (347)
T 2iy9_A 225 -----------------------------------------------------------RKG-----------------E 228 (347)
T ss_dssp -----------------------------------------------------------CTT-----------------S
T ss_pred -----------------------------------------------------------CCC-----------------c
Confidence 000 0
Q ss_pred eeecceeEEEccCcccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEe
Q 006605 517 VKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDI 596 (639)
Q Consensus 517 ~~~~~~~~~i~~~~~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~s 596 (639)
. ....+.++.||+|||+ ||||+|||++|+|+++ ++.|..++
T Consensus 229 ~-----------------~~~~~~~~~fS~~G~~------------~~di~APG~~i~s~~~----------~~~~~~~s 269 (347)
T 2iy9_A 229 T-----------------PVLHGGGITGSRFGNN------------WVDIAAPGQNITFLRP----------DAKTGTGS 269 (347)
T ss_dssp C-----------------CCBCCCSSSCBCBCTT------------TCSEEEECSSEEEECT----------TSCEEEEC
T ss_pred e-----------------ecccCCCCCCCCCCCC------------CCEEEeCCCCeEeecC----------CCCeEecc
Confidence 0 0000134799999993 7999999999999986 56899999
Q ss_pred eeccccccccccceeccccCCCCCHHHHHHHHhhcccccc
Q 006605 597 WNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 597 GTSmAaP~vaG~~al~~~~~p~~sp~~i~~~~~~~~~~~~ 636 (639)
|||||||||||++||+++++|.|||.|||.+|.......+
T Consensus 270 GTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 309 (347)
T 2iy9_A 270 GTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYP 309 (347)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECG
T ss_pred chHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 9999999999999999999999999999999998766543
No 27
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=3.5e-42 Score=363.59 Aligned_cols=278 Identities=19% Similarity=0.211 Sum_probs=194.2
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccc-cCCCCCCCCCCCceEeeecchhhHhhhc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCE-VDPDTKRSFCNGKIIGAQHFAEAAIAAR 220 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~n~ki~~~~~~~~~~~~~~ 220 (639)
.+|.. +++|+||+||||||||+ +||+|.++...++..+.. .... .+.+... ...... ++.+...
T Consensus 23 ~aw~~----g~~G~gV~VaViDtGi~-~hp~l~~~~~~~~~~~~~--~~~~~d~~~~~~----~~~~~~-~~~~~~~--- 87 (340)
T 3lpc_A 23 KVWDM----GFTGQNVVVAVVDTGIL-HHRDLNANVLPGYDFISN--SQISLDGDGRDA----DPFDEG-DWFDNWA--- 87 (340)
T ss_dssp HHHHH----TCSCTTCEEEEEESCBC-CCTTTGGGBCCCEECCCC--HHHHCSSSSSBS----CCBCCC-CCBCTTT---
T ss_pred HHHHh----cCCCCCeEEEEEcCCCC-CChhhhcccccCccccCC--ccccccCCCccC----Cccccc-ccccccc---
Confidence 56765 78999999999999998 999998763221111100 0000 0000000 000000 0000000
Q ss_pred cCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHh--
Q 006605 221 AFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH-- 298 (639)
Q Consensus 221 ~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~-- 298 (639)
....+.+.....|..||||||||||+|...++. ++.||||+|+|+.+|+++..+ ++.++++++++|+++
T Consensus 88 ~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~--------g~~GvAp~a~l~~~~v~~~~~-~~~~~~~~ai~~a~~~~ 158 (340)
T 3lpc_A 88 CGGRPDPRKERSDSSWHGSHVAGTIAAVTNNRI--------GVAGVAYGAKVVPVRALGRCG-GYDSDISDGLYWAAGGR 158 (340)
T ss_dssp TSCTTCGGGSCBCCCCHHHHHHHHHHCCCSSSS--------SCCCTTTTSEEEEEECCBTTB-CCHHHHHHHHHHHHTCC
T ss_pred ccCCCCcccCCCCCCCCHHHHHHHHHccCCCCC--------cceeecCCCEEEEEEEecCCC-CcHHHHHHHHHHHhccc
Confidence 000111223456889999999999999754322 368999999999999998865 788999999999998
Q ss_pred --------CCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcccCCCccEEEceeecC
Q 006605 299 --------DGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK-TLVSYSPWITTVAAAIDD 369 (639)
Q Consensus 299 --------~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVgA~~~~ 369 (639)
.+++|||||||.... ....+..+++++.++|++||+||||+|.... .+|+..+++|+|||++.
T Consensus 159 ~~~~~~~~~~~~Vin~S~G~~~~-------~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~- 230 (340)
T 3lpc_A 159 IAGIPENRNPAKVINMSLGSDGQ-------CSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS- 230 (340)
T ss_dssp CTTSCCCSSCCSEEEECCCEESC-------CCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT-
T ss_pred ccccccccCCCeEEEeCcCCCCC-------cchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC-
Confidence 899999999997422 2457888999999999999999999986532 23344455555544210
Q ss_pred cceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCc
Q 006605 370 RRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGT 449 (639)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~ 449 (639)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccC
Q 006605 450 ASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDG 529 (639)
Q Consensus 450 ~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 529 (639)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccc
Q 006605 530 LMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDS 609 (639)
Q Consensus 530 ~~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~ 609 (639)
.+.++.||+||| ||||+|||++|+++++.... ...++.|..++|||||||+|||++
T Consensus 231 --------~~~~~~~S~~g~-------------~~di~ApG~~i~s~~~~~~~---~~~~~~~~~~sGTS~AaP~vaG~a 286 (340)
T 3lpc_A 231 --------RGIRASFSNYGV-------------DVDLAAPGQDILSTVDSGTR---RPVSDAYSFMAGTSMATPHVSGVA 286 (340)
T ss_dssp --------TSSBCTTCCBST-------------TCCEEEECSSEEEEEESCSS---SCCSEEEEEECSHHHHHHHHHHHH
T ss_pred --------CCCcCCCCCCCC-------------CceEEecCCCeecccCCCCc---CCCCCcceecccHhHHHHHHHHHH
Confidence 012367888887 48999999999999975321 112456999999999999999999
Q ss_pred eecccc-C---CCCCHHHHHHHHhhccccc
Q 006605 610 CSCEAE-A---PLLEPSCYKISIDDHNNEV 635 (639)
Q Consensus 610 al~~~~-~---p~~sp~~i~~~~~~~~~~~ 635 (639)
||++++ + |.|||.|||.+|.......
T Consensus 287 All~~~~~~~~p~lt~~~v~~~L~~tA~~~ 316 (340)
T 3lpc_A 287 ALVISAANSVNKNLTPAELKDVLVSTTSPF 316 (340)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHTCBCC
T ss_pred HHHHHhhhhhCCCCCHHHHHHHHHhcCCcC
Confidence 999988 5 9999999999998876654
No 28
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=3.5e-42 Score=353.23 Aligned_cols=222 Identities=24% Similarity=0.299 Sum_probs=183.2
Q ss_pred CCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhccCCCCCCCCCC
Q 006605 152 RAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASP 231 (639)
Q Consensus 152 ~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (639)
.+|+||+|||||||||++||+|.++ +...++|.++ .
T Consensus 29 ~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~~---------------~ 64 (279)
T 3f7m_A 29 SAGAGACVYVIDTGVEDTHPDFEGR-----------------------------AKQIKSYAST---------------A 64 (279)
T ss_dssp TTTTTEEEEEEESCCCTTCGGGTTC-----------------------------EEEEEECSSS---------------S
T ss_pred CCCCCCEEEEEcCCCCCCChhhccc-----------------------------cccccCCCCC---------------C
Confidence 4999999999999999999999865 4444444331 2
Q ss_pred CCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhCC-------CcEE
Q 006605 232 LDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDG-------VDIL 304 (639)
Q Consensus 232 ~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~g-------~dVI 304 (639)
.|.+||||||||||+|. ..||||+|+|+.+|+++..+.+..++++++++|+++++ ++||
T Consensus 65 ~d~~gHGT~vAgii~~~--------------~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vi 130 (279)
T 3f7m_A 65 RDGHGHGTHCAGTIGSK--------------TWGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVA 130 (279)
T ss_dssp SCSSSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEE
T ss_pred CCCCCcHHHHHHHHhcC--------------ccccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEE
Confidence 27889999999999986 36999999999999999887889999999999999876 8999
Q ss_pred EeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCc-ccCCCccEEEceeecCcceeeeeEeCCCeE
Q 006605 305 SLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTL-VSYSPWITTVAAAIDDRRYKNHLNLGNGKI 383 (639)
Q Consensus 305 n~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~-~~~~~~vitVgA~~~~~~~~~~~~~g~~~~ 383 (639)
|||||.. ....+.++++++.++|++||+||||+|...... |+..+++|+|||++.
T Consensus 131 n~S~g~~---------~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------- 186 (279)
T 3f7m_A 131 SMSLGGG---------YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS--------------- 186 (279)
T ss_dssp EECCCEE---------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------------
T ss_pred EeCCCcC---------ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC---------------
Confidence 9999963 356899999999999999999999998653222 333344444444110
Q ss_pred EEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHHHHhcC
Q 006605 384 LAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLG 463 (639)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~~G 463 (639)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCcccccc
Q 006605 464 AAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVAL 543 (639)
Q Consensus 464 a~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ia~ 543 (639)
.+.++.
T Consensus 187 --------------------------------------------------------------------------~~~~~~ 192 (279)
T 3f7m_A 187 --------------------------------------------------------------------------NDVRST 192 (279)
T ss_dssp --------------------------------------------------------------------------TSBBCT
T ss_pred --------------------------------------------------------------------------CCCCCC
Confidence 013468
Q ss_pred ccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCCCCCHHH
Q 006605 544 FSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSC 623 (639)
Q Consensus 544 FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~~sp~~ 623 (639)
||+|||. |||+|||++|+++++ ++.|..++|||||||+|||++||+++++|. +|.|
T Consensus 193 ~S~~g~~-------------~di~ApG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~ 248 (279)
T 3f7m_A 193 FSNYGRV-------------VDIFAPGTSITSTWI----------GGRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGA 248 (279)
T ss_dssp TCCBSTT-------------CCEEEECSSEEEECG----------GGCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTT
T ss_pred CCCCCCC-------------CeEEECCCCeEeecC----------CCCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHH
Confidence 9999983 689999999999986 567999999999999999999999999999 9999
Q ss_pred HHHHHhhccc
Q 006605 624 YKISIDDHNN 633 (639)
Q Consensus 624 i~~~~~~~~~ 633 (639)
||..|.....
T Consensus 249 v~~~L~~tA~ 258 (279)
T 3f7m_A 249 MCGRIQTLST 258 (279)
T ss_dssp HHHHHHHHSE
T ss_pred HHHHHHHhcc
Confidence 9999987653
No 29
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=5e-42 Score=373.78 Aligned_cols=239 Identities=17% Similarity=0.155 Sum_probs=184.7
Q ss_pred CCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhccCCCCCCCCC
Q 006605 151 DRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFAS 230 (639)
Q Consensus 151 ~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~~ 230 (639)
+++|+||+|+|||||||++||+|.++. ....+++..+ .+.......
T Consensus 22 ~~tG~GV~VaVIDTGId~~HpdL~gr~----------------------------~~~~~~~v~~------~dg~~f~~~ 67 (546)
T 2qtw_B 22 PDGGSLVEVYLLDTSIQSDHREIEGRV----------------------------MVTDFENVPE------EDGTRFHRQ 67 (546)
T ss_dssp --CCTTSEEEEEESCCCTTSTTTTTTE----------------------------EEEEEECCCC------CC-------
T ss_pred CCCCCCcEEEEECCCCCCCChHHcccc----------------------------cccCcccccC------CCCccccCC
Confidence 689999999999999999999999761 1111111100 000000124
Q ss_pred CCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhC------CCcEE
Q 006605 231 PLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD------GVDIL 304 (639)
Q Consensus 231 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~------g~dVI 304 (639)
+.|.+||||||||||+|. ..||||+|+|+.+|++++++.++.+++++||+|+++. +++||
T Consensus 68 ~~D~~GHGThVAGIIag~--------------~~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VI 133 (546)
T 2qtw_B 68 ASKCDSHGTHLAGVVSGR--------------DAGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVV 133 (546)
T ss_dssp CTTTTHHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEE
T ss_pred CCCCCChHHHHHHHHhcc--------------CCCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEE
Confidence 568899999999999997 2699999999999999988778899999999999984 99999
Q ss_pred EeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcccCCCccEEEceeecCcceeeeeEeCCCeE
Q 006605 305 SLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK-TLVSYSPWITTVAAAIDDRRYKNHLNLGNGKI 383 (639)
Q Consensus 305 n~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVgA~~~~~~~~~~~~~g~~~~ 383 (639)
|||||+. +...+..+++++.++|++||+||||+|.+.. .+|+..+++|+|||++.++..
T Consensus 134 NmSlGg~---------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~----------- 193 (546)
T 2qtw_B 134 LLPLAGG---------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP----------- 193 (546)
T ss_dssp EECEEEE---------CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB-----------
T ss_pred EecCCCC---------CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc-----------
Confidence 9999963 2468899999999999999999999997643 346667888888875422100
Q ss_pred EEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHHHHhcC
Q 006605 384 LAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLG 463 (639)
Q Consensus 384 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~~G 463 (639)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCcccccc
Q 006605 464 AAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVAL 543 (639)
Q Consensus 464 a~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ia~ 543 (639)
. . + -+.
T Consensus 194 ------------------------------a-~-----------------------~--------------------s~~ 199 (546)
T 2qtw_B 194 ------------------------------V-T-----------------------L--------------------GTL 199 (546)
T ss_dssp ------------------------------C-E-----------------------E--------------------TTE
T ss_pred ------------------------------c-c-----------------------c--------------------cCC
Confidence 0 0 0 012
Q ss_pred ccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccccCCCCCHHH
Q 006605 544 FSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSC 623 (639)
Q Consensus 544 FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~~~p~~sp~~ 623 (639)
||+||| ||||+|||++|+|+++.. +..|..++|||||||||||++||+++++|.|+|.|
T Consensus 200 fSn~G~-------------~vDI~APG~~I~St~~~~--------~~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~q 258 (546)
T 2qtw_B 200 GTNFGR-------------CVDLFAPGEDIIGASSDC--------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAE 258 (546)
T ss_dssp ECCBST-------------TCCEEEECSSEEEECTTS--------TTCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHH
T ss_pred cCCCCC-------------cceEEecCccEEeeccCC--------CCcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHH
Confidence 666666 489999999999998732 35799999999999999999999999999999999
Q ss_pred HHHHHhhcc
Q 006605 624 YKISIDDHN 632 (639)
Q Consensus 624 i~~~~~~~~ 632 (639)
||..|....
T Consensus 259 Vr~~L~~tA 267 (546)
T 2qtw_B 259 LRQRLIHFS 267 (546)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHhc
Confidence 999998754
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=5.3e-40 Score=360.92 Aligned_cols=259 Identities=17% Similarity=0.139 Sum_probs=186.3
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
.+|.. +++|+||+|||||||||++||+|.++.. ...+++|.++.
T Consensus 29 ~aw~~----g~~G~gv~VaViDtGvd~~Hpdl~~~~~---------------------------~~~~~d~~~~~----- 72 (471)
T 1p8j_A 29 EAWAQ----GFTGHGIVVSILDDGIEKNHPDLAGNYD---------------------------PGASFDVNDQD----- 72 (471)
T ss_dssp HHHHT----TCSCTTCEEEEEEBCCCTTCTTTGGGBC---------------------------GGGCEETTTTB-----
T ss_pred HHHhc----CCCCCCCEEEEEeCCcCCCChhHhhccC---------------------------ccCcccccCCC-----
Confidence 45665 7899999999999999999999997510 00123333320
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHh-CC
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH-DG 300 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~-~g 300 (639)
..+.+...+.|.++|||||||||+|...++. .+.||||+|+|+.+|+++ +..+++++|++|+++ ++
T Consensus 73 -~~p~~~~~~~d~~gHGT~vAGiiaa~~~n~~--------g~~GvAp~a~i~~~rv~~----g~~~~~~~ai~~a~~~~~ 139 (471)
T 1p8j_A 73 -PDPQPRYTQMNDNRHGTRCAGEVAAVANNGV--------CGVGVAYNARIGGVRMLD----GEVTDAVEARSLGLNPNH 139 (471)
T ss_dssp -SCCCCCCCTTCTTCHHHHHHHHHHCCSSSSS--------SCCCTTTTSEEEEEECSS----SCCCHHHHHHHHTSCTTT
T ss_pred -CCCCCccCCCCCCCcHHHHHHHHHeeccCCC--------CCEEECCCCeEEEEEccC----CchhHHHHHHHhhhccCC
Confidence 0011112456889999999999999754322 368999999999999986 335689999999999 99
Q ss_pred CcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHh-----CCcEEEEecCCCCCCCCC--c--ccCCCccEEEceeecCcc
Q 006605 301 VDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVK-----AGVFVAQAAGNGGPFPKT--L--VSYSPWITTVAAAIDDRR 371 (639)
Q Consensus 301 ~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~g~~~~~--~--~~~~~~vitVgA~~~~~~ 371 (639)
++|||||||........ ......+.++++++.+ +|++||+||||+|..... . ++.++++|+|||++
T Consensus 140 ~~Vin~S~G~~~~~~~~-~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~---- 214 (471)
T 1p8j_A 140 IHIYSASWGPEDDGKTV-DGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSAT---- 214 (471)
T ss_dssp CCEEEECCBSCCSSSCC-BCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEEC----
T ss_pred CeEEEeccCcCCCCCcc-cCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEeccc----
Confidence 99999999975431110 1123345566666653 799999999999864211 0 00111222222210
Q ss_pred eeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcch
Q 006605 372 YKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTAS 451 (639)
Q Consensus 372 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~ 451 (639)
T Consensus 215 -------------------------------------------------------------------------------- 214 (471)
T 1p8j_A 215 -------------------------------------------------------------------------------- 214 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcc
Q 006605 452 IKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLM 531 (639)
Q Consensus 452 ~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 531 (639)
T Consensus 215 -------------------------------------------------------------------------------- 214 (471)
T 1p8j_A 215 -------------------------------------------------------------------------------- 214 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeecccccccccccee
Q 006605 532 PILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCS 611 (639)
Q Consensus 532 ~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al 611 (639)
..+.++.||++||+.. ...+|...+||.+|+++.+ .++.|..++|||||||||||++||
T Consensus 215 -----~~g~~a~~S~~g~~~~-------~~~~~~~~~~g~~i~st~~---------~~~~~~~~sGTS~AaP~VAG~aAL 273 (471)
T 1p8j_A 215 -----QFGNVPWYSEACSSTL-------ATTYSSGNQNEKQIVTTDL---------RQKCTESHTGTSASAPLAAGIIAL 273 (471)
T ss_dssp -----TTSCCCTTCCBCTTCC-------EEEECCCSTTSCCEEEEET---------TTEEEEEECSHHHHHHHHHHHHHH
T ss_pred -----CCCCcccccCCCCcce-------EEeCCCCCCCCCCEEEeeC---------CCCccccCCCcccccchhhhHHHH
Confidence 0123478999999874 6778999999999999976 245699999999999999999999
Q ss_pred ccccCCCCCHHHHHHHHhhccccc
Q 006605 612 CEAEAPLLEPSCYKISIDDHNNEV 635 (639)
Q Consensus 612 ~~~~~p~~sp~~i~~~~~~~~~~~ 635 (639)
+++++|.|||.|||.+|.......
T Consensus 274 l~~~~p~lt~~~v~~~L~~tA~~~ 297 (471)
T 1p8j_A 274 TLEANKNLTWRDMQHLVVQTSKPA 297 (471)
T ss_dssp HHHHCTTCCHHHHHHHHHHHCBCT
T ss_pred HHhhCCCCCHHHHHHHHHhcCccC
Confidence 999999999999999999876544
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=9.8e-39 Score=353.21 Aligned_cols=156 Identities=22% Similarity=0.266 Sum_probs=115.5
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhcc
Q 006605 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (639)
Q Consensus 142 ~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (639)
.+|.. +++|+||+|||||||||++||+|.++. +. .++++|.++.
T Consensus 45 ~aw~~----g~tG~gv~VaViDtGvd~~Hpdl~~~~---------~~------------------~~~~d~~~~~----- 88 (503)
T 2id4_A 45 DLWYN----NITGAGVVAAIVDDGLDYENEDLKDNF---------CA------------------EGSWDFNDNT----- 88 (503)
T ss_dssp HHHHT----TCSCTTCEEEEEESCCCTTSTTTTTTB---------CG------------------GGCEETTTTB-----
T ss_pred HHHhc----CCCCCCeEEEEEeCCCCCCChhHhhcc---------cc------------------cCcccCCCCC-----
Confidence 35655 789999999999999999999999761 10 1123443320
Q ss_pred CCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHhCCC
Q 006605 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (639)
Q Consensus 222 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~~g~ 301 (639)
.+.....|.++|||||||||+|...++ ..+.||||+|+|+.+|+++. .++.+++++||+|+++++
T Consensus 89 ----~~~~p~~d~~gHGT~vAGiiaa~~~n~--------~~~~GvAp~a~i~~~rv~~~--~~~~~~~~~ai~~a~~~~- 153 (503)
T 2id4_A 89 ----NLPKPRLSDDYHGTRCAGEIAAKKGNN--------FCGVGVGYNAKISGIRILSG--DITTEDEAASLIYGLDVN- 153 (503)
T ss_dssp ----SCCCCCSTTTTHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECTTS--CCCHHHHHHHTTTTTTTC-
T ss_pred ----CCCCCCCCCCChHHHHHHHHHhccCCC--------CCcEEECCCCEEEEEEeeCC--CCChHHHHHHHHhHhhcC-
Confidence 011122578899999999999975332 23689999999999999974 477889999999999998
Q ss_pred cEEEeccCCCCCCCCCCcCcccHHHHHHHHHH-----hCCcEEEEecCCCCCC
Q 006605 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAV-----KAGVFVAQAAGNGGPF 349 (639)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~ 349 (639)
+|||||||........ ......+.++++++. .+|++||+||||+|..
T Consensus 154 ~Iin~S~G~~~~~~~~-~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~ 205 (503)
T 2id4_A 154 DIYSCSWGPADDGRHL-QGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTR 205 (503)
T ss_dssp SEEEECEESCCSSSCC-BCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGG
T ss_pred CEEEeCCCcCCCCccc-cCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCc
Confidence 9999999975432111 112346777777776 4799999999999864
No 32
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=3.7e-39 Score=364.50 Aligned_cols=152 Identities=20% Similarity=0.224 Sum_probs=104.8
Q ss_pred CCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhccCCCCCCCCC
Q 006605 151 DRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFAS 230 (639)
Q Consensus 151 ~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~~ 230 (639)
+++|+||+|||||||||++||+|.++.. .+.++|..+ ..+..
T Consensus 66 g~~G~gV~VaViDtGid~~Hpdl~~~~~----------------------------~~~~~~~~~----------~~d~~ 107 (600)
T 2oxa_A 66 GVLGHGVNVAVVDDGLAIAHPDLADNVR----------------------------PGSKNVVTG----------SDDPT 107 (600)
T ss_dssp TCSCTTCEEEEESSCCCTTCTTTGGGBC----------------------------SCCBCTTTC----------SSCCC
T ss_pred CCCCCCcEEEEecCCcCCCCcchhhccc----------------------------cCceeccCC----------CCCCC
Confidence 7999999999999999999999996511 112333322 11233
Q ss_pred CCC-CCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCH-HHHHHHHHHHHhCCCcEEEecc
Q 006605 231 PLD-GDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFV-ADVVAAIDQAVHDGVDILSLSV 308 (639)
Q Consensus 231 ~~d-~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~-s~i~~ai~~a~~~g~dVIn~Sl 308 (639)
|.| .+||||||||||||. .++ ..+.||||+|+|+.+|+++..+.... ..+++....+..++++||||||
T Consensus 108 p~d~~~gHGT~vAGiiaa~-~n~--------~g~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~ 178 (600)
T 2oxa_A 108 PTDPDTGHGTSVSGIIAAV-DNA--------IGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSY 178 (600)
T ss_dssp CCSTTCCHHHHHHHHHHCC-SSS--------SSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEECC
T ss_pred CCCCCCCCccHHHHHhhcc-cCC--------CcceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEec
Confidence 454 789999999999998 332 23689999999999999998654432 3344444447778999999999
Q ss_pred CCCCCCCCCCcCcccHHHHHH-HH--HHhCCcEEEEecCCCCCC
Q 006605 309 GPNSPPATTKTTFLNPFDVTL-LA--AVKAGVFVAQAAGNGGPF 349 (639)
Q Consensus 309 G~~~~~~~~~~~~~~~~~~a~-~~--a~~~Gi~vV~AAGN~g~~ 349 (639)
|...............+..++ +. +.++|++||+||||+|..
T Consensus 179 G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~ 222 (600)
T 2oxa_A 179 RMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNK 222 (600)
T ss_dssp CCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSE
T ss_pred cCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCcc
Confidence 986432221111112232333 22 456899999999999864
No 33
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=3.9e-37 Score=359.97 Aligned_cols=221 Identities=20% Similarity=0.214 Sum_probs=160.4
Q ss_pred CCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCC--CHHHHHHHHHHHHh-----CCCcEE
Q 006605 232 LDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGG--FVADVVAAIDQAVH-----DGVDIL 304 (639)
Q Consensus 232 ~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~--~~s~i~~ai~~a~~-----~g~dVI 304 (639)
.|++||||||||||||.. ++ .++.||||+|+|+.+|+++...+. ..++++.+|.+|++ +|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~--------~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SS--------RDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SS--------SSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CC--------CCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478999999999999985 22 247899999999999999875432 55677888877777 799999
Q ss_pred EeccCCCCCCCCCCcCcccHHHHHHHHHH-hCCcEEEEecCCCCCCCCC--cccC--CCccEEEceeecCcceeeeeEeC
Q 006605 305 SLSVGPNSPPATTKTTFLNPFDVTLLAAV-KAGVFVAQAAGNGGPFPKT--LVSY--SPWITTVAAAIDDRRYKNHLNLG 379 (639)
Q Consensus 305 n~SlG~~~~~~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~g~~~~~--~~~~--~~~vitVgA~~~~~~~~~~~~~g 379 (639)
|||||...... ..+.+..++.++. ++|++||+||||+|.+..+ +|+. ++++|+|||++.++....
T Consensus 338 NmS~G~~~~~~-----~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a----- 407 (1354)
T 3lxu_X 338 NMSYGEHANWS-----NSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEA----- 407 (1354)
T ss_dssp EECCCCCCSCS-----SCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-----
T ss_pred EcCCccCCCCC-----ccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccc-----
Confidence 99999865322 2457888888886 8999999999999986443 4554 799999999754321000
Q ss_pred CCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhhhhHHHH
Q 006605 380 NGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETA 459 (639)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~ 459 (639)
+ +.
T Consensus 408 -----------------------------------------~-----ys------------------------------- 410 (1354)
T 3lxu_X 408 -----------------------------------------E-----YA------------------------------- 410 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------------c-----cc-------------------------------
Confidence 0 00
Q ss_pred HhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeEEEccCcccccCCCcc
Q 006605 460 KSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAP 539 (639)
Q Consensus 460 ~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 539 (639)
... ...+
T Consensus 411 --------------------------------~~~-----------------------------------------~~~g 417 (1354)
T 3lxu_X 411 --------------------------------MRE-----------------------------------------KLPG 417 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------ccc-----------------------------------------CCCC
Confidence 000 0002
Q ss_pred ccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccceeccc----c
Q 006605 540 QVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEA----E 615 (639)
Q Consensus 540 ~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~al~~~----~ 615 (639)
.+++||||||+.+ +++||||+|||++|+|+.+. .++.|..++|||||||+|||++||+++ +
T Consensus 418 ~~asFSS~GPt~d-------g~~KpDIaAPG~~I~St~~~--------~~~~y~~~SGTSmAAP~VAGvAALLLSalkq~ 482 (1354)
T 3lxu_X 418 NVYTWTSRDPCID-------GGQGVTVCAPGGAIASVPQF--------TMSKSQLMNGTSMAAPHVAGAVALLISGLKQQ 482 (1354)
T ss_dssp CCCCCCCCSCCSS-------SSCCEEEEEEC-----------------------CCCCGGGCHHHHHHHHHHHHHHHHHT
T ss_pred ccccccCCCCCcc-------CCCcceEEecCceEEEeecC--------CCCceecCCCCCHHHHHHHHHHHHHHHhhHhh
Confidence 4589999999985 99999999999999998542 246788999999999999999999975 8
Q ss_pred CCCCCHHHHHHHHhhcccccc
Q 006605 616 APLLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 616 ~p~~sp~~i~~~~~~~~~~~~ 636 (639)
+|.|||.+||.+|.+.....+
T Consensus 483 ~P~LTp~qVk~lL~~TA~~~~ 503 (1354)
T 3lxu_X 483 NIEYSPYSIKRAISVTATKLG 503 (1354)
T ss_dssp TCCCCHHHHHHHHHTTSBCCT
T ss_pred CCCCCHHHHHHHHHHhCccCC
Confidence 999999999999998776554
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=2e-35 Score=334.98 Aligned_cols=183 Identities=19% Similarity=0.224 Sum_probs=123.9
Q ss_pred CCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceEeeecchhhHhhhccCCCCCCCCC
Q 006605 151 DRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFAS 230 (639)
Q Consensus 151 ~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~~ 230 (639)
+++|+||+|||||||||++||||.++. + .+.++|.++ ..+...
T Consensus 66 g~tG~GV~VaViDtGid~~HpDL~~n~---------~-------------------~~~~~~~~~---------~~dp~p 108 (600)
T 3hjr_A 66 GVLGQGVNVAVVDDGLAIAHPDLADNV---------R-------------------PGSKNVVTG---------SDDPTP 108 (600)
T ss_dssp TCSCTTCEEEEESSCCCTTCTTTGGGB---------C-------------------SCCBCTTTS---------SSCCCC
T ss_pred CCCCCCeEEEEEcCCCCCCChhHhhcc---------c-------------------cCcceeecC---------CCCCCC
Confidence 799999999999999999999999761 1 111222221 011122
Q ss_pred CCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCHHHHHHHH-HHHHhCCCcEEEeccC
Q 006605 231 PLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAI-DQAVHDGVDILSLSVG 309 (639)
Q Consensus 231 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai-~~a~~~g~dVIn~SlG 309 (639)
..|.++|||||||||||..+ + .++.||||+|+|+.+|++++.+.+..++++.|+ +++..++++|||||||
T Consensus 109 ~~~~~gHGThVAGiIAa~~n-~--------~g~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G 179 (600)
T 3hjr_A 109 TDPDTAHGTSVSGIIAAVDN-A--------IGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYG 179 (600)
T ss_dssp CSTTCCHHHHHHHHHHCCSS-S--------SSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCC
T ss_pred CCCCCChHHHHHHHHhEeCC-C--------CCcEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccC
Confidence 34578999999999999632 1 236899999999999999988778888888776 6677889999999999
Q ss_pred CCCCCCCC-CcCcccHHHHHHHHH--HhCCcEEEEecCCCCCCC--------------------C--CcccCCCccEEEc
Q 006605 310 PNSPPATT-KTTFLNPFDVTLLAA--VKAGVFVAQAAGNGGPFP--------------------K--TLVSYSPWITTVA 364 (639)
Q Consensus 310 ~~~~~~~~-~~~~~~~~~~a~~~a--~~~Gi~vV~AAGN~g~~~--------------------~--~~~~~~~~vitVg 364 (639)
........ .......+..++... ..+|+++|+||||.+... + ..++..+++|+||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~~~~IsVg 259 (600)
T 3hjr_A 180 MSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVS 259 (600)
T ss_dssp CCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGSSSEEEEE
T ss_pred ccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCccccCcceEEe
Confidence 75432111 011112233333332 248999999999975321 1 1122346789999
Q ss_pred eeecCcceeeeeEeC
Q 006605 365 AAIDDRRYKNHLNLG 379 (639)
Q Consensus 365 A~~~~~~~~~~~~~g 379 (639)
|++.+...+.|++.|
T Consensus 260 A~~~~g~~a~yS~~G 274 (600)
T 3hjr_A 260 ALNADGVRSSYSSVG 274 (600)
T ss_dssp EECTTSSBCTTCCBC
T ss_pred eecCCCCEeecccCC
Confidence 888776655554443
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.84 E-value=3.5e-22 Score=221.47 Aligned_cols=100 Identities=30% Similarity=0.346 Sum_probs=79.3
Q ss_pred eeeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHh---CCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEE
Q 006605 263 ASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH---DGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFV 339 (639)
Q Consensus 263 ~~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~---~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~v 339 (639)
+.||||+|+|+.+++.+ ..++++++|+|+++ ++++|||||||....... ..+...++.++.+|..+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~~-----~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~--~~~~~~~~~~~~~a~~~Gi~v 346 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAPN-----TDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWA--PASIAAMNRAFLDAAALGVTV 346 (552)
T ss_dssp HHHHCTTSEEEEEECCS-----SHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSC--HHHHHHHHHHHHHHHHTTCEE
T ss_pred hhccCCCCeEEEEEcCC-----CCchHHHHHHHHHhcccCCCCEEEecccCCcccCC--HHHHHHHHHHHHHHHhCCeEE
Confidence 67999999999998732 35789999999998 799999999997532100 112346778888899999999
Q ss_pred EEecCCCCCCC--------CCcccCCCccEEEceeecC
Q 006605 340 AQAAGNGGPFP--------KTLVSYSPWITTVAAAIDD 369 (639)
Q Consensus 340 V~AAGN~g~~~--------~~~~~~~~~vitVgA~~~~ 369 (639)
|+||||+|... ..+|+.+|+|++||+++..
T Consensus 347 v~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 347 LAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp EEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred EEecCCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 99999999653 3456778999999998753
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.76 E-value=2.6e-19 Score=189.17 Aligned_cols=104 Identities=15% Similarity=0.159 Sum_probs=81.1
Q ss_pred eeccCCCeEEEEEeeecCCCCCHHHHHHHHHHHHh-CCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEe
Q 006605 264 SGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH-DGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQA 342 (639)
Q Consensus 264 ~GvAP~A~l~~~kv~~~~~~~~~s~i~~ai~~a~~-~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~A 342 (639)
..+||+++++.+++.+.. .+..++++++|+||++ ++++|||||||........ ..+.+.++.+++++..+||+||+|
T Consensus 90 g~~aP~a~~~~~~~~~~~-~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~-~~~~~~~~~~~~~a~~~Gitvv~A 167 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQS-ASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANA-DGTLQAEDRIFATAAAQGQTFSVS 167 (372)
T ss_dssp HHTTSCEEEEEEEEECTT-SSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHH-TTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhcCCCCcEEEEEeCCCC-CcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCch-HHHHHHHHHHHHHHHhCCcEEEEE
Confidence 357899999999998653 3567889999999998 8999999999974210000 112356788888899999999999
Q ss_pred cCCCCCCCC-------------CcccCCCccEEEceeecC
Q 006605 343 AGNGGPFPK-------------TLVSYSPWITTVAAAIDD 369 (639)
Q Consensus 343 AGN~g~~~~-------------~~~~~~~~vitVgA~~~~ 369 (639)
|||+|...+ .+|+.+|+|++||+++..
T Consensus 168 sGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 168 SGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp CCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred ECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 999997642 356678999999998754
No 37
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.66 E-value=7e-08 Score=91.14 Aligned_cols=85 Identities=16% Similarity=0.178 Sum_probs=63.9
Q ss_pred CCCcCCCCCCCccC------CccccEEEEeeecccccCc-chhhhhHHHHHhcCCeEEEEeecCCC-CC-ccc-CCCccc
Q 006605 417 SASDCQRPEVLNKN------LVEGNILLCGYSFNFVTGT-ASIKKVSETAKSLGAAGFVLAVENVS-PG-TKF-DPVPVG 486 (639)
Q Consensus 417 ~~~~c~~~~~~~~~------~~~Gkivl~~r~~~~~~g~-~~~~~k~~~~~~~Ga~gvi~~~~~~~-~~-~~~-~~~~~~ 486 (639)
....|.+....... ..+|||+|++| |. |+|.+|+.||+++||.++||||+... .. ..+ .+....
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~R------G~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~ 155 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQR------GGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVD 155 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEES------CTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCS
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEEC------CCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCc
Confidence 45789853322111 24789999999 78 99999999999999999999998421 11 122 223457
Q ss_pred ccEEEEcCcchHHHHHHHHhcC
Q 006605 487 IPGILITDVTKSMDLVDYYNTS 508 (639)
Q Consensus 487 ip~~~i~~~~~g~~l~~~~~~~ 508 (639)
||+++|++ .+|+.|++++..+
T Consensus 156 IPsv~Is~-~~G~~L~~~L~~G 176 (194)
T 3icu_A 156 IVAIMIGN-LKGTKILQSIQRG 176 (194)
T ss_dssp SEEEEECH-HHHHHHHHHHHTT
T ss_pred eeEEEECH-HHHHHHHHHHHCC
Confidence 99999999 9999999999875
No 38
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.66 E-value=9.9e-08 Score=77.49 Aligned_cols=47 Identities=23% Similarity=0.280 Sum_probs=42.7
Q ss_pred CeeEEEeecceeeEEEEEcCHHHHHHHHcCCCceEEEeeeeecccCCC
Q 006605 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTH 132 (639)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~ 132 (639)
+.+++++|.+ |+||++++++++++.|+++|+|.+||+|..++++++.
T Consensus 33 g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 33 GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSAT 79 (80)
T ss_dssp TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC-
T ss_pred CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeeec
Confidence 5688999998 9999999999999999999999999999999887654
No 39
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.60 E-value=1.8e-07 Score=81.19 Aligned_cols=44 Identities=30% Similarity=0.388 Sum_probs=41.0
Q ss_pred CeeEEEeecceeeEEEEEcCHHHHHHHHcCCCceEEEeeeeecc
Q 006605 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRR 128 (639)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~ 128 (639)
..++++.|.+.|+||+++++++++++|+++|+|.+||+|..++.
T Consensus 70 ~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 70 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp CCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 56889999999999999999999999999999999999998764
No 40
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.54 E-value=5.8e-08 Score=106.86 Aligned_cols=78 Identities=18% Similarity=0.254 Sum_probs=55.3
Q ss_pred HHHHHHHHH--hCCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCC----------CCcccC
Q 006605 289 VVAAIDQAV--HDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP----------KTLVSY 356 (639)
Q Consensus 289 i~~ai~~a~--~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----------~~~~~~ 356 (639)
.++.+++.. .+.++|||+|||....... ..+...+..++..+..+||.|++|+||+|... ..+|+.
T Consensus 285 ~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~--~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas 362 (544)
T 3edy_A 285 FLQWLMLLSNESALPHVHTVSYGDDEDSLS--SAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPAS 362 (544)
T ss_dssp HHHHHHHHTTCSSCCSEEEEECCEEGGGSC--HHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTT
T ss_pred HHHHHHHHhccCCCCcEEEecCCCcccccC--HHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCC
Confidence 444444433 3578999999998533110 11234567778888899999999999999753 245677
Q ss_pred CCccEEEceeec
Q 006605 357 SPWITTVAAAID 368 (639)
Q Consensus 357 ~~~vitVgA~~~ 368 (639)
+|+|++||+++.
T Consensus 363 ~P~VtaVGgT~l 374 (544)
T 3edy_A 363 SPYVTTVGGTSF 374 (544)
T ss_dssp CTTSEEEEEEEE
T ss_pred CCcEEEEeeeec
Confidence 899999999874
No 41
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.48 E-value=5.5e-07 Score=79.17 Aligned_cols=44 Identities=30% Similarity=0.388 Sum_probs=40.8
Q ss_pred CeeEEEeecceeeEEEEEcCHHHHHHHHcCCCceEEEeeeeecc
Q 006605 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRR 128 (639)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~ 128 (639)
..++.+.|++.|+||++++++++++.|+++|+|.+||++..++.
T Consensus 80 g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 80 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 45889999999999999999999999999999999999998764
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.39 E-value=1.4e-06 Score=69.82 Aligned_cols=42 Identities=24% Similarity=0.287 Sum_probs=37.3
Q ss_pred eEEEee-cceeeEEEEEcCHHHHHHHHcC--CCceEEEeeeeecc
Q 006605 87 KKLYSY-KHLINGFAVHITPDQAEILQRA--PGVKSVERDWKVRR 128 (639)
Q Consensus 87 ~~~~~~-~~~~~g~~~~~~~~~~~~L~~~--p~V~~v~~~~~~~~ 128 (639)
++.+.| ..+|+||++.++++.++.|+++ |.|.+||+|..++.
T Consensus 31 ~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 31 TITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp CCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred ceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 566777 4799999999999999999999 89999999988764
No 43
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=97.19 E-value=0.00081 Score=72.06 Aligned_cols=74 Identities=15% Similarity=0.115 Sum_probs=58.1
Q ss_pred CCccCCccccEEEEeeecccccCcchhhhhHHHHHhcCCeEEEEeecCCCCCc-ccC-CCcccccEEEEcCcchHHHHHH
Q 006605 426 VLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGT-KFD-PVPVGIPGILITDVTKSMDLVD 503 (639)
Q Consensus 426 ~~~~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~-~~~-~~~~~ip~~~i~~~~~g~~l~~ 503 (639)
++...+++|||||+.| |.|.|.+|+.+|+++||.++|++++...... .+. +....||.+.|+. ++++.|++
T Consensus 107 D~~~~dv~GkIvlv~~------g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~-~~a~~L~~ 179 (421)
T 2ek8_A 107 DVAGKDLNGKIALIQR------GNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITK-QEGDALAA 179 (421)
T ss_dssp TTTTSCCTTSEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECH-HHHHHHHH
T ss_pred hcCCCCcCceEEEEeC------CCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCH-HHHHHHHH
Confidence 3444589999999998 7899999999999999999999998532111 111 2346799999998 89999999
Q ss_pred HHh
Q 006605 504 YYN 506 (639)
Q Consensus 504 ~~~ 506 (639)
+++
T Consensus 180 ~l~ 182 (421)
T 2ek8_A 180 NLR 182 (421)
T ss_dssp HHH
T ss_pred Hhh
Confidence 883
No 44
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.14 E-value=0.00099 Score=51.22 Aligned_cols=44 Identities=27% Similarity=0.406 Sum_probs=39.3
Q ss_pred CCeeEEEeecceeeEEEEEcCHHHHHHHHcCCCceEEEeeeeecc
Q 006605 84 DTYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRR 128 (639)
Q Consensus 84 ~~~~~~~~~~~~~~g~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~ 128 (639)
.+.++.++|. .+++++++++++.++.|+++|+|++||+|..++.
T Consensus 21 ~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 21 IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp GTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred CCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 3678889985 8999999999999999999999999999987653
No 45
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=96.32 E-value=0.0036 Score=70.89 Aligned_cols=72 Identities=22% Similarity=0.250 Sum_probs=55.7
Q ss_pred cCCccccEEEEeeecccccCcchhhhhHHHHHhcCCeEEEEeecCCC---------------------CCcc--------
Q 006605 429 KNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVS---------------------PGTK-------- 479 (639)
Q Consensus 429 ~~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~~Ga~gvi~~~~~~~---------------------~~~~-------- 479 (639)
..+++|||||++| |.|.+.+|+.+|+++||.|+|||++... .+..
T Consensus 150 ~~~v~GkIvlv~~------G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GD 223 (707)
T 3fed_A 150 GINCTGKIVIARY------GKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGD 223 (707)
T ss_dssp CCCCTTCEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCS
T ss_pred CCCCCCeEEEEEC------CCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCC
Confidence 4579999999998 7799999999999999999999986320 0000
Q ss_pred -cCC-----------------CcccccEEEEcCcchHHHHHHHHhc
Q 006605 480 -FDP-----------------VPVGIPGILITDVTKSMDLVDYYNT 507 (639)
Q Consensus 480 -~~~-----------------~~~~ip~~~i~~~~~g~~l~~~~~~ 507 (639)
..| ....||++.|+. .+++.|++.+..
T Consensus 224 p~TPG~ps~~~~~r~~~~~~~~~p~IP~~pIS~-~da~~Ll~~l~g 268 (707)
T 3fed_A 224 PLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGY-NDAEILLRYLGG 268 (707)
T ss_dssp TTCTTSCCCTTCCCCCGGGCTTCCSSCEEEECH-HHHHHHHHTBCB
T ss_pred CCCCCCcccCCCcccChhhccCCCCCCeEecCH-HHHHHHHHHhcC
Confidence 000 023799999998 999999997764
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=96.23 E-value=0.0042 Score=69.63 Aligned_cols=70 Identities=20% Similarity=0.293 Sum_probs=54.5
Q ss_pred CCccccEEEEeeecccccCcchhhhhHHHHHhcCCeEEEEeecCCCCCc-----------------ccCC----------
Q 006605 430 NLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGT-----------------KFDP---------- 482 (639)
Q Consensus 430 ~~~~Gkivl~~r~~~~~~g~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~-----------------~~~~---------- 482 (639)
.+++|||||+.| |.|.+..|+.+|+++||.|+|+|++....+. ...+
T Consensus 128 vdv~GkIvlv~~------g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~ 201 (640)
T 3kas_A 128 TPVNGSIVIVRA------GKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQF 201 (640)
T ss_dssp SCCTTSEEEEES------CSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCC
T ss_pred cccCCcEEEEec------CCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccc
Confidence 479999999998 7899999999999999999999998642111 0000
Q ss_pred ------CcccccEEEEcCcchHHHHHHHHh
Q 006605 483 ------VPVGIPGILITDVTKSMDLVDYYN 506 (639)
Q Consensus 483 ------~~~~ip~~~i~~~~~g~~l~~~~~ 506 (639)
....||++.|+. ++++.|++.+.
T Consensus 202 ~~~~~~~~p~IP~~~Is~-~~a~~Ll~~l~ 230 (640)
T 3kas_A 202 PPSRSSGLPNIPVQTISR-AAAEKLFGNME 230 (640)
T ss_dssp CCCSSCCCCSSCEEECCH-HHHHHHHTTEE
T ss_pred ccccccCCCCCCEEecCH-HHHHHHHHHcc
Confidence 123689999988 99999988665
No 47
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.85 E-value=0.015 Score=62.53 Aligned_cols=79 Identities=11% Similarity=0.148 Sum_probs=53.0
Q ss_pred cCCccccEEEEeeeccc-cc--Ccchhhhh----HHHHHhcCCeEEEEeecCCCCC------c-ccCCCcccccEEEEcC
Q 006605 429 KNLVEGNILLCGYSFNF-VT--GTASIKKV----SETAKSLGAAGFVLAVENVSPG------T-KFDPVPVGIPGILITD 494 (639)
Q Consensus 429 ~~~~~Gkivl~~r~~~~-~~--g~~~~~~k----~~~~~~~Ga~gvi~~~~~~~~~------~-~~~~~~~~ip~~~i~~ 494 (639)
..+++|||||++|+... .. ..|.+..| ..+|+++||+++|++++..... . ........||++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 46899999999883210 00 01234444 4579999999999998743211 1 1112345799999998
Q ss_pred cchHHHHHHHHhcC
Q 006605 495 VTKSMDLVDYYNTS 508 (639)
Q Consensus 495 ~~~g~~l~~~~~~~ 508 (639)
++++.|++.++.+
T Consensus 204 -~da~~L~~~l~~g 216 (444)
T 3iib_A 204 -PDADLINAMLKRD 216 (444)
T ss_dssp -HHHHHHHHHHTTT
T ss_pred -HHHHHHHHHHhCC
Confidence 9999999988754
No 48
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=89.28 E-value=0.15 Score=61.07 Aligned_cols=25 Identities=28% Similarity=0.606 Sum_probs=23.5
Q ss_pred CCCCCceEEEEecceecCCCCCCCC
Q 006605 151 DRAGEDIVIGFVDSGIYPHHPSFGS 175 (639)
Q Consensus 151 ~~~G~gv~VaViDtGid~~Hp~f~~ 175 (639)
.|.|+||+|||+|||||+.+|.|+-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 5899999999999999999999984
No 49
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=86.08 E-value=0.36 Score=51.61 Aligned_cols=28 Identities=25% Similarity=0.287 Sum_probs=24.4
Q ss_pred ccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeC
Q 006605 538 APQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWS 578 (639)
Q Consensus 538 ~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~ 578 (639)
.+.++.||++||. +||+|||++|+|+++
T Consensus 183 ~~~~~~~S~~g~~-------------vdv~ApG~~i~s~~~ 210 (441)
T 1y9z_A 183 NLDHAAFSQYTDQ-------------VEISGPGEAILSTVT 210 (441)
T ss_dssp TCCBCTTSCCCTT-------------EEEEEECSSEEEECS
T ss_pred CCCCCccccCCCc-------------eEEEeccCCeecccc
Confidence 3568999999973 799999999999987
No 50
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=69.59 E-value=1.3 Score=32.75 Aligned_cols=30 Identities=7% Similarity=0.147 Sum_probs=25.6
Q ss_pred ccceeccccCCCCCHHHHHHHHhhcccccc
Q 006605 607 RDSCSCEAEAPLLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 607 G~~al~~~~~p~~sp~~i~~~~~~~~~~~~ 636 (639)
-....+.+.+|++++..|+.+|.+|++.+.
T Consensus 11 e~l~~L~emFP~ld~~~I~~vL~a~~gdvd 40 (59)
T 1wgl_A 11 EDLKAIQDMFPNMDQEVIRSVLEAQRGNKD 40 (59)
T ss_dssp HHHHHHHHHCSSSCHHHHHHHHTTTTTCHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHcCCCHH
Confidence 344567889999999999999999998874
No 51
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=43.96 E-value=5.4 Score=44.16 Aligned_cols=47 Identities=9% Similarity=-0.131 Sum_probs=42.5
Q ss_pred CCceEEEeeeccccccccccceeccccCCCCCHHHHHHHHhhccccc
Q 006605 589 GKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEV 635 (639)
Q Consensus 589 ~~~y~~~sGTSmAaP~vaG~~al~~~~~p~~sp~~i~~~~~~~~~~~ 635 (639)
...|..++|||||||||||++||++|++|.|||.|||.+|+.--..+
T Consensus 326 ~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~ 372 (600)
T 3hjr_A 326 CDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRV 372 (600)
T ss_dssp CCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCC
T ss_pred CCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccC
Confidence 45789999999999999999999999999999999999998765443
No 52
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.64 E-value=10 Score=28.68 Aligned_cols=28 Identities=7% Similarity=0.069 Sum_probs=24.1
Q ss_pred ceeccccCCCCCHHHHHHHHhhcccccc
Q 006605 609 SCSCEAEAPLLEPSCYKISIDDHNNEVG 636 (639)
Q Consensus 609 ~al~~~~~p~~sp~~i~~~~~~~~~~~~ 636 (639)
..-+.+.+|++++..|+.+|.+++..+.
T Consensus 22 v~~L~~MFP~lD~~vI~~vL~a~~G~vd 49 (67)
T 2dhy_A 22 MDDFKTMFPNMDYDIIECVLRANSGAVD 49 (67)
T ss_dssp HHHHHHHCSSSCHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHcCCCHH
Confidence 4457889999999999999999998764
Done!