STRING 9.05 
  AT3G09100 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT3G09100
mRNA capping enzyme family protein; mRNA capping enzyme family protein; FUNCTIONS IN- in 7 functions; INVOLVED IN- in 7 processes; LOCATED IN- nucleus; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nucleic acid-binding, OB-fold (InterPro-IPR012340), Protein-tyrosine phosphatase (InterPro-IPR000387), ATP dependent DNA ligase, central (InterPro-IPR012310), mRNA capping enzyme, bifunctional (InterPro-IPR017074), mRNA capping enzyme (InterPro-IPR001339), Protein-tyrosine phosphatase, active site (InterPro-IPR016130), Nucleic acid-binding [...] (672 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
NRPB1
NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding / DNA-directed RNA polymerase; Encodes the [...] (1840 aa)
      0.913
UVH6
UVH6 (ULTRAVIOLET HYPERSENSITIVE 6); ATP binding / ATP-dependent DNA helicase/ ATP-dependent he [...] (758 aa)
       0.910
NRPB4
NRPB4; DNA-directed RNA polymerase; Non-catalytic subunit specific to DNA-dependent RNA polymer [...] (138 aa)
       0.909
NRPB7
NRPB7; DNA-directed RNA polymerase/ RNA binding; Non-catalytic subunit specific to DNA-directed [...] (176 aa)
       0.907
AT1G18340
basal transcription factor complex subunit-related; basal transcription factor complex subunit- [...] (301 aa)
       0.906
NRPB2
NRPB2; DNA binding / DNA-directed RNA polymerase; Encodes the unique second-largest subunit of [...] (1188 aa)
      0.905
AT5G01290
mRNA guanylyltransferase/ phosphatase/ polynucleotide 5'-phosphatase/ protein tyrosine phosphat [...] (657 aa)
     0.904
AT3G20650
mRNA capping enzyme family protein; mRNA capping enzyme family protein; FUNCTIONS IN- catalytic [...] (370 aa)
      0.903
AT1G61700
DNA-directed RNA polymerase II, putative (RPB10); Protein of unknown function that is homologou [...] (71 aa)
       0.902
NRPB10
NRPB10; DNA binding / DNA-directed RNA polymerase; Non-catalytic subunit common to nuclear DNA- [...] (71 aa)
       0.902
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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