Query 006606
Match_columns 639
No_of_seqs 464 out of 2311
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 04:05:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006606.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006606hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtx_A MRNA-capping enzyme; gu 100.0 1.8E-67 6.2E-72 557.5 18.0 297 298-614 35-342 (343)
2 3kyh_C MRNA-capping enzyme sub 100.0 2.8E-66 9.7E-71 561.8 24.3 310 298-614 34-407 (461)
3 1p16_A GTP--RNA, mRNA capping 100.0 3.2E-58 1.1E-62 498.9 24.4 312 298-618 31-382 (395)
4 1ckm_A MRNA capping enzyme; nu 100.0 1.4E-54 5E-59 459.0 23.8 275 299-611 48-328 (330)
5 2c46_A MRNA capping enzyme; ph 100.0 3.4E-36 1.2E-40 305.4 20.5 194 82-278 24-217 (241)
6 1yn9_A BVP, polynucleotide 5'- 100.0 1.3E-32 4.3E-37 264.0 18.5 166 84-256 1-168 (169)
7 2cfm_A Thermostable DNA ligase 99.9 1.2E-24 4.2E-29 245.2 15.7 164 327-520 243-432 (561)
8 2hiv_A Thermostable DNA ligase 99.9 3.7E-23 1.3E-27 235.5 19.5 165 327-520 274-470 (621)
9 1vs0_A Putative DNA ligase-lik 99.9 1.6E-23 5.3E-28 220.0 14.3 163 324-520 23-197 (310)
10 1x9n_A DNA ligase I; 5'-adenyl 99.9 5.6E-23 1.9E-27 235.8 19.5 173 322-520 326-530 (688)
11 3gde_A DNA ligase; DNA-binding 99.9 6.2E-22 2.1E-26 222.5 17.5 164 326-520 245-432 (558)
12 1fvi_A Chlorella virus DNA lig 99.9 4.7E-22 1.6E-26 207.5 13.6 158 325-520 18-196 (297)
13 3l2p_A DNA ligase 3; DNA ligas 99.8 5.5E-20 1.9E-24 207.3 24.0 165 326-520 247-440 (579)
14 2oud_A Dual specificity protei 99.8 1.4E-20 4.9E-25 181.7 13.5 132 139-277 32-163 (177)
15 3rgo_A Protein-tyrosine phosph 99.8 5.2E-20 1.8E-24 173.1 16.1 122 139-264 27-152 (157)
16 1a0i_A DNA ligase; DNA replica 99.8 1.2E-20 4.3E-25 201.2 13.1 183 311-520 9-248 (348)
17 3emu_A Leucine rich repeat and 99.8 2.9E-20 1E-24 176.9 13.9 117 139-264 34-150 (161)
18 3ezz_A Dual specificity protei 99.8 1.9E-20 6.5E-25 174.2 11.1 115 139-262 28-142 (144)
19 3s4e_A Dual specificity protei 99.8 1.9E-20 6.6E-25 174.4 11.0 114 139-261 28-141 (144)
20 3s4o_A Protein tyrosine phosph 99.8 7E-20 2.4E-24 173.7 15.1 139 102-258 23-165 (167)
21 1ohe_A CDC14B, CDC14B2 phospha 99.8 1.5E-19 5.1E-24 192.4 18.2 147 100-261 182-331 (348)
22 2hxp_A Dual specificity protei 99.8 6.5E-20 2.2E-24 173.2 13.5 118 139-264 30-148 (155)
23 2nt2_A Protein phosphatase sli 99.8 3.5E-20 1.2E-24 172.7 11.3 116 139-263 28-143 (145)
24 1zzw_A Dual specificity protei 99.8 7.7E-20 2.6E-24 171.1 13.1 119 139-264 28-146 (149)
25 1rxd_A Protein tyrosine phosph 99.8 3E-19 1E-23 167.9 16.2 153 90-263 2-156 (159)
26 3rz2_A Protein tyrosine phosph 99.8 2.4E-19 8.1E-24 174.9 15.9 143 101-264 36-178 (189)
27 2e0t_A Dual specificity phosph 99.8 1.1E-19 3.9E-24 170.2 11.8 120 139-263 26-146 (151)
28 2j16_A SDP-1, tyrosine-protein 99.8 1E-19 3.4E-24 176.7 11.6 116 139-263 64-179 (182)
29 3f81_A Dual specificity protei 99.8 1.2E-19 4E-24 175.7 11.5 121 139-264 52-177 (183)
30 4erc_A Dual specificity protei 99.8 7.3E-19 2.5E-23 164.0 16.1 116 139-262 34-149 (150)
31 2hcm_A Dual specificity protei 99.8 2E-19 6.8E-24 171.2 12.3 118 139-265 36-153 (164)
32 2img_A Dual specificity protei 99.8 2E-18 6.8E-23 160.9 17.0 116 139-262 35-150 (151)
33 2esb_A Dual specificity protei 99.8 4.3E-19 1.5E-23 173.1 12.4 118 139-265 44-161 (188)
34 2g6z_A Dual specificity protei 99.8 3.8E-19 1.3E-23 176.5 11.6 118 139-265 30-147 (211)
35 2r0b_A Serine/threonine/tyrosi 99.8 4.5E-19 1.6E-23 166.6 11.4 119 139-262 32-151 (154)
36 3v0d_A Voltage-sensor containi 99.8 1.8E-18 6E-23 183.0 16.4 151 100-262 30-189 (339)
37 1wrm_A Dual specificity phosph 99.8 7.7E-19 2.6E-23 167.5 11.8 115 139-263 31-145 (165)
38 3n0a_A Tyrosine-protein phosph 99.8 3.4E-18 1.2E-22 181.8 16.4 151 100-263 27-178 (361)
39 2y96_A Dual specificity phosph 99.8 8.3E-19 2.8E-23 175.2 11.0 121 139-264 78-201 (219)
40 1yz4_A DUSP15, dual specificit 99.8 1.4E-18 4.9E-23 164.6 11.9 114 139-262 32-145 (160)
41 2wgp_A Dual specificity protei 99.8 2.9E-18 9.8E-23 167.5 13.4 118 139-265 50-167 (190)
42 2pq5_A Dual specificity protei 99.8 1.7E-18 5.7E-23 171.2 11.8 122 139-265 70-194 (205)
43 3cm3_A Late protein H1, dual s 99.8 1.1E-18 3.9E-23 168.1 9.9 114 139-261 53-173 (176)
44 1d5r_A Phosphoinositide phosph 99.7 2.5E-17 8.6E-22 173.9 17.4 153 100-264 22-178 (324)
45 1fpz_A Cyclin-dependent kinase 99.7 3E-17 1E-21 162.8 14.0 128 130-264 63-198 (212)
46 2q05_A Late protein H1, dual s 99.7 1.2E-17 4E-22 163.8 10.9 117 138-263 69-192 (195)
47 2i6j_A Ssoptp, sulfolobus solf 99.7 4.1E-17 1.4E-21 153.8 10.0 117 139-263 27-151 (161)
48 3vnn_A DNA ligase 4; non-homol 99.7 2E-16 6.7E-21 146.8 13.5 101 328-431 1-126 (139)
49 3nme_A Ptpkis1 protein, SEX4 g 99.6 9.1E-16 3.1E-20 159.8 13.6 113 139-256 38-160 (294)
50 1xri_A AT1G05000; structural g 99.5 5.5E-15 1.9E-19 138.2 5.4 100 139-245 32-135 (151)
51 2f46_A Hypothetical protein; s 99.2 1.1E-10 3.7E-15 110.0 11.4 93 139-242 41-141 (156)
52 3mmj_A MYO-inositol hexaphosph 99.1 1.3E-10 4.6E-15 120.4 11.7 83 156-244 174-257 (314)
53 1fpr_A Protein-tyrosine phosph 99.1 5.6E-10 1.9E-14 115.5 12.7 141 102-257 77-268 (284)
54 1p15_A Protein-tyrosine phosph 99.0 5.4E-10 1.8E-14 113.7 10.6 143 102-260 52-240 (253)
55 2hc1_A Receptor-type tyrosine- 99.0 2E-09 6.9E-14 111.7 14.1 93 164-257 181-279 (291)
56 3b7o_A Tyrosine-protein phosph 99.0 2.1E-09 7.2E-14 112.8 13.6 93 164-257 202-303 (316)
57 3gxh_A Putative phosphatase (D 99.0 2.3E-09 7.7E-14 101.1 12.0 120 126-260 29-152 (157)
58 1jln_A STEP-like ptpase, prote 99.0 3.2E-09 1.1E-13 110.5 14.2 140 103-257 102-283 (297)
59 3f41_A Phytase; tandem repeat, 99.0 2.4E-09 8.3E-14 119.8 13.2 81 156-242 491-572 (629)
60 2b49_A Protein tyrosine phosph 99.0 4.3E-09 1.5E-13 109.0 14.2 91 164-258 175-271 (287)
61 2cjz_A Human protein tyrosine 99.0 4.7E-09 1.6E-13 109.6 14.0 141 103-257 110-292 (305)
62 4grz_A Tyrosine-protein phosph 99.0 8.4E-09 2.9E-13 106.8 15.6 141 102-257 79-270 (288)
63 2ooq_A Receptor-type tyrosine- 98.9 5E-09 1.7E-13 108.5 13.7 140 102-258 90-274 (286)
64 2gjt_A Receptor-type tyrosine- 98.9 6.2E-09 2.1E-13 108.2 14.2 137 103-257 93-277 (295)
65 2i75_A Tyrosine-protein phosph 98.9 1.3E-08 4.4E-13 106.9 15.8 139 103-258 114-299 (320)
66 2p6x_A Tyrosine-protein phosph 98.9 9E-09 3.1E-13 107.7 14.1 138 103-257 98-284 (309)
67 2bzl_A Tyrosine-protein phosph 98.9 1.8E-08 6.1E-13 106.1 15.8 88 171-258 215-314 (325)
68 1zc0_A Tyrosine-protein phosph 98.9 7E-09 2.4E-13 108.4 12.6 140 103-257 113-294 (309)
69 3f41_A Phytase; tandem repeat, 98.9 6.1E-09 2.1E-13 116.6 11.9 82 156-243 193-276 (629)
70 1yfo_A D1, receptor protein ty 98.9 1.6E-08 5.3E-13 105.5 13.6 139 103-258 99-287 (302)
71 1g4w_R Protein tyrosine phosph 98.8 5.9E-09 2E-13 112.2 9.9 100 163-262 270-377 (383)
72 3i36_A Vascular protein tyrosi 98.8 2.6E-08 8.9E-13 105.6 14.7 142 102-258 112-299 (342)
73 3qwu_A DNA ligase; structural 98.8 1.8E-08 6.3E-13 106.2 12.8 162 305-494 52-222 (370)
74 2cm2_A Tyrosine-protein phosph 98.8 2.4E-08 8.2E-13 104.2 12.2 86 171-257 185-278 (304)
75 2h4v_A Receptor-type tyrosine- 98.8 5.7E-08 2E-12 102.1 14.9 86 170-258 218-308 (320)
76 2oc3_A Tyrosine-protein phosph 98.7 3.9E-08 1.3E-12 102.6 11.5 85 171-258 199-291 (303)
77 3s3e_A Tyrosine-protein phosph 98.7 1E-07 3.6E-12 99.5 14.2 142 102-260 113-299 (307)
78 2b3o_A Tyrosine-protein phosph 98.7 1.1E-07 3.8E-12 106.7 15.3 93 164-257 409-510 (532)
79 2jjd_A Receptor-type tyrosine- 98.7 6.6E-08 2.3E-12 110.0 13.6 92 165-258 483-580 (599)
80 1lar_A Protein (LAR); tyrosine 98.7 1E-07 3.4E-12 108.0 14.6 140 103-257 376-561 (575)
81 1wch_A Protein tyrosine phosph 98.7 5.6E-08 1.9E-12 101.9 11.5 83 170-257 213-300 (315)
82 4az1_A Tyrosine specific prote 98.7 6E-08 2E-12 101.1 11.4 83 171-258 194-283 (302)
83 1xk5_A Snurportin-1; protein-R 98.7 7.4E-07 2.5E-11 86.6 17.3 162 326-510 21-183 (204)
84 1l8k_A T-cell protein-tyrosine 98.7 8.2E-08 2.8E-12 100.6 11.5 87 171-258 180-271 (314)
85 2i1y_A Receptor-type tyrosine- 98.6 5.8E-08 2E-12 101.1 9.8 84 171-257 197-286 (301)
86 2shp_A SHP-2, SYP, SHPTP-2; ty 98.6 2E-07 6.7E-12 104.4 14.7 87 171-258 423-517 (525)
87 3m4u_A Tyrosine specific prote 98.6 1.2E-07 4E-12 99.1 11.3 86 170-260 196-288 (306)
88 1lar_A Protein (LAR); tyrosine 98.6 3.5E-07 1.2E-11 103.5 15.7 139 103-258 87-271 (575)
89 3ps5_A Tyrosine-protein phosph 98.6 2.5E-07 8.6E-12 105.1 14.4 86 171-257 417-510 (595)
90 1ygr_A CD45 protein tyrosine p 98.6 1.9E-07 6.5E-12 106.4 12.7 145 103-261 408-604 (610)
91 2vug_A PAB1020; RNA, ligase, A 98.6 7.6E-07 2.6E-11 95.6 16.3 161 305-494 73-242 (389)
92 2jjd_A Receptor-type tyrosine- 98.6 3.8E-07 1.3E-11 103.7 14.6 138 103-257 98-284 (599)
93 1ywf_A Phosphotyrosine protein 98.5 1.1E-07 3.9E-12 98.7 8.2 112 125-242 56-213 (296)
94 3gjx_B Snurportin-1; transport 98.5 2E-06 6.9E-11 89.2 16.6 164 326-513 122-286 (365)
95 1ygr_A CD45 protein tyrosine p 98.5 3.7E-07 1.2E-11 104.1 11.9 138 103-257 98-284 (610)
96 4i8n_A Tyrosine-protein phosph 98.5 4.7E-07 1.6E-11 96.4 10.8 86 171-257 213-306 (354)
97 1lyv_A Protein-tyrosine phosph 98.4 8.7E-07 3E-11 92.4 11.3 62 201-262 234-299 (306)
98 4ge6_A Tyrosine-protein phosph 98.4 1.5E-06 5E-11 91.0 11.6 141 103-257 96-294 (314)
99 2nlk_A Protein tyrosine phosph 98.3 2.8E-06 9.4E-11 97.1 13.8 85 170-257 200-289 (627)
100 2nlk_A Protein tyrosine phosph 98.1 7.6E-06 2.6E-10 93.5 9.4 87 171-262 494-585 (627)
101 1ohe_A CDC14B, CDC14B2 phospha 96.9 0.0021 7.1E-08 68.0 9.0 69 172-242 49-121 (348)
102 1s68_A RNA ligase 2; ribonucle 96.3 0.02 6.7E-07 57.6 10.7 109 322-430 24-145 (249)
103 2hvq_A ORF1, hypothetical 37.6 96.1 0.032 1.1E-06 58.6 11.7 110 322-431 25-147 (335)
104 1ta8_A DNA ligase, NAD-depende 95.4 0.17 5.9E-06 52.7 13.6 159 327-512 114-318 (332)
105 1b04_A Protein (DNA ligase); D 94.8 0.19 6.4E-06 52.2 11.9 159 327-512 108-312 (318)
106 4glw_A DNA ligase; inhibitor, 93.1 1.3 4.3E-05 45.7 14.1 153 325-511 101-304 (305)
107 4glx_A DNA ligase; inhibitor, 93.0 2.1 7.1E-05 48.0 16.6 162 326-515 108-320 (586)
108 3jsl_A DNA ligase; NAD+-depend 92.7 1.8 6.3E-05 44.7 14.6 154 327-512 106-310 (318)
109 3uq8_A DNA ligase; adenylated 90.9 2.7 9.1E-05 43.6 13.4 158 327-512 108-316 (322)
110 1zau_A DNA ligase; AMP; HET: D 86.2 0.39 1.3E-05 50.0 3.3 146 326-497 116-306 (328)
111 1xdn_A RNA editing ligase MP52 85.9 4.5 0.00016 40.7 10.8 107 322-429 29-189 (277)
112 2owo_A DNA ligase; protein-DNA 84.1 15 0.00052 41.7 15.3 159 327-514 109-319 (671)
113 1vee_A Proline-rich protein fa 84.0 1.8 6.1E-05 38.5 6.3 85 125-229 7-99 (134)
114 1dgs_A DNA ligase; AMP complex 77.3 39 0.0013 38.3 15.6 160 327-514 110-317 (667)
115 3sgi_A DNA ligase; HET: DNA AM 74.5 25 0.00085 39.5 12.9 161 327-513 117-328 (615)
116 2yf0_A Myotubularin-related pr 58.3 11 0.00038 41.4 5.8 27 199-225 327-353 (512)
117 2c5u_A RNA ligase, T4 RNA liga 57.8 21 0.00071 37.7 7.6 101 325-428 92-201 (375)
118 1zsq_A Myotubularin-related pr 54.5 16 0.00055 40.3 6.3 25 200-224 340-364 (528)
119 3iwh_A Rhodanese-like domain p 52.0 13 0.00045 31.3 4.1 29 199-230 54-82 (103)
120 1lw3_A Myotubularin-related pr 48.8 22 0.00075 40.2 6.3 25 200-224 412-436 (657)
121 2hhg_A Hypothetical protein RP 45.7 14 0.00048 32.4 3.4 28 199-229 84-111 (139)
122 3foj_A Uncharacterized protein 45.2 16 0.00054 30.2 3.5 28 199-229 54-81 (100)
123 3hzu_A Thiosulfate sulfurtrans 44.7 45 0.0015 33.9 7.6 91 125-230 42-138 (318)
124 2fsx_A RV0390, COG0607: rhodan 41.8 20 0.00067 32.0 3.8 89 126-229 8-105 (148)
125 3gk5_A Uncharacterized rhodane 41.5 18 0.00062 30.4 3.3 28 199-229 53-80 (108)
126 3eme_A Rhodanese-like domain p 40.6 25 0.00087 29.0 4.1 28 199-229 54-81 (103)
127 1qxn_A SUD, sulfide dehydrogen 40.2 20 0.00069 31.6 3.6 28 199-229 80-107 (137)
128 3flh_A Uncharacterized protein 38.9 23 0.00078 30.6 3.6 80 125-229 17-98 (124)
129 2jtq_A Phage shock protein E; 37.2 66 0.0022 25.3 6.0 29 199-230 39-67 (85)
130 4f67_A UPF0176 protein LPG2838 35.8 54 0.0018 32.7 6.2 86 122-229 121-206 (265)
131 3ilm_A ALR3790 protein; rhodan 32.7 39 0.0013 30.0 4.2 30 198-230 53-82 (141)
132 1gmx_A GLPE protein; transfera 32.0 72 0.0025 26.4 5.6 76 126-229 8-83 (108)
133 1e0c_A Rhodanese, sulfurtransf 31.1 39 0.0013 33.1 4.3 30 198-230 220-249 (271)
134 3hix_A ALR3790 protein; rhodan 30.3 45 0.0016 27.7 4.0 29 199-230 50-78 (106)
135 2k0z_A Uncharacterized protein 27.6 59 0.002 27.2 4.3 29 198-229 53-81 (110)
136 1e0c_A Rhodanese, sulfurtransf 26.0 93 0.0032 30.3 6.1 30 199-230 79-108 (271)
137 1uas_A Alpha-galactosidase; TI 25.2 79 0.0027 32.7 5.6 82 126-214 75-168 (362)
138 3g5j_A Putative ATP/GTP bindin 24.7 91 0.0031 26.4 5.1 27 200-229 87-115 (134)
139 1uar_A Rhodanese; sulfurtransf 22.9 67 0.0023 31.6 4.4 28 199-229 231-259 (285)
140 3f4a_A Uncharacterized protein 22.7 54 0.0019 30.0 3.4 24 201-225 104-127 (169)
141 3d1p_A Putative thiosulfate su 22.3 82 0.0028 27.3 4.4 90 124-230 24-117 (139)
142 3i2v_A Adenylyltransferase and 22.2 61 0.0021 27.4 3.4 23 202-226 73-95 (127)
143 3olh_A MST, 3-mercaptopyruvate 22.1 96 0.0033 31.1 5.4 40 188-230 240-280 (302)
144 2gwf_A Ubiquitin carboxyl-term 21.9 1.7E+02 0.0057 26.1 6.5 81 125-213 22-104 (157)
145 5nul_A Flavodoxin; electron tr 21.2 3.7E+02 0.013 22.6 9.7 73 130-213 19-91 (138)
146 1whb_A KIAA0055; deubiqutinati 20.4 1.2E+02 0.004 27.1 5.1 84 122-213 14-99 (157)
No 1
>3rtx_A MRNA-capping enzyme; guanylyltransferase, RNA polymerase II CTD, lysyl-N-GMP, NUC mRNA capping, transferase; HET: SEP GUN; 2.81A {Mus musculus} PDB: 3s24_A
Probab=100.00 E-value=1.8e-67 Score=557.49 Aligned_cols=297 Identities=40% Similarity=0.655 Sum_probs=198.9
Q ss_pred cccCCCCCCCCCccccccchhhhhhhcccceeeeecCceeEEEEEEE-CCEEEEEeCCCccccc-cCcCCCcCCcccccc
Q 006606 298 ALHGRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLIT-IDGCYLIDRCFNFRRV-QMRFPCRNSNEGLGE 375 (639)
Q Consensus 298 ~~~~~~~~~FPGsqPVsl~r~~l~~l~~~~Y~V~eK~DG~R~ll~i~-~~~vyLidR~~~~~~v-~~~FP~~~~~~~~~~ 375 (639)
.+++|++.+|||||||||+|+||+.|.+.+|+|||||||+|+||++. ++++||+||++.++.+ +.+||+..+..
T Consensus 35 ~~~~~~~~~FPGsqPVS~~r~nl~~L~~~~y~v~~K~DG~R~ll~i~~~~~v~L~sR~~~~~~~~~~~FP~~~~~~---- 110 (343)
T 3rtx_A 35 QFCGWEGSGFPGAQPVSMDKQNIRLLEQKPYKVSWKADGTRYMMLIDGTNEVFMIDRDNSVFHVSNLEFPFRKDLR---- 110 (343)
T ss_dssp HHTTCCSSSCCSEEEEECCTTGGGHHHHSCEEEEEECCCEEEEEEECSTTCEEEECTTCCEEEETTCCCEETTEEE----
T ss_pred HHhCCCCCCCCCceeeccchhhHHhhccCCEEEEECCCceEEEEEEEcCCEEEEEeCCCCeEEeccccCCcchhhh----
Confidence 47799999999999999999999999999999999999999999999 7899999999997655 58999775431
Q ss_pred cCCCCeEeeEEEEEecCCCCCCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCC
Q 006606 376 KTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLE 455 (639)
Q Consensus 376 ~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~ 455 (639)
..+.+||||||||+++..+. ..++|++||+|+++|++++++||.+|+++|++.|+.|+...++ ++.+..+.+
T Consensus 111 ~~~~~tvLDGElV~~~~~g~--~~~~~~~FDlL~~~G~dl~~~pl~eR~~~L~~~i~~p~~~~~~------~~~~~~~~~ 182 (343)
T 3rtx_A 111 MHLSNTLLDGEMIIDKVNGQ--AVPRYLIYDIIKFNAQPVGDCDFNIRLQCIEREIISPRHEKMK------TGLIDKTQE 182 (343)
T ss_dssp EECCSEEEEEEEEEEESSSS--EEEEEEEEEEEEBTTBCGGGSCHHHHHHHHHHHTHHHHHHHHH------HSSCCTTTS
T ss_pred ccCCCeEEEEEEEEecCCCc--EeeEEEEEEEEeECCcCcccCCHHHHHHHHHHHhhhHHHHHhh------cccccccCC
Confidence 23688999999999875432 4689999999999999999999999999999999988865431 122345678
Q ss_pred CcEEEecceeechhHHHHH-HHhcccccCCCceEEEEeCCCCCccCCCCCeEEEecCCCceEEEEEEEecCC-c------
Q 006606 456 PFRVRRKDFWLLSTVNKLL-KEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDD-R------ 527 (639)
Q Consensus 456 pf~I~~K~~~~~~~~~~l~-~~~~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKp~~~nTvDF~l~~~~~~-~------ 527 (639)
||.|+.|+|++++.++++| .++++++.|++|||||||.+ ||.+|++..||||||+++|||||+|++.... .
T Consensus 183 pf~vr~K~~~~~~~~~~ll~~~~~~~l~~~~dGlIf~~~~-~Y~~G~~~~~lKwKp~~~~tvDF~l~~~~~~~~g~~~~~ 261 (343)
T 3rtx_A 183 PFSVRPKQFFDINISRKLLEGNFAKEVSHEMDGLIFQPIG-KYKPGRCDDILKWKPPSLNSVDFRLKITRMGGEGLLPQN 261 (343)
T ss_dssp SSEEEECCCEEGGGHHHHSCC----------CEEEEEESS-CCCCEEEEEEEEECCSTTCC-------------------
T ss_pred CcEEEEEEeEehhhHHHHHhhhhHhhcCCCCCeEEEEECc-cCcCCCCcceEEEecCcceEEEEEEEecccCCCCccccc
Confidence 9999999999999999998 46889999999999999999 9999999999999999999999999886431 1
Q ss_pred -eeEEEEeCCeeeeecCceeEecCCCCCCCCceEEEEEEeCCCCeeEEEEEeCCCCCCChHHHHHHHHHhcccCCCHHHH
Q 006606 528 -QLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVL 606 (639)
Q Consensus 528 -~~L~~~~~g~~~~~~~~~~~f~~~~~~~~dg~IvEc~~d~~~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~d~It~e~L 606 (639)
+.||+ +|...++.. +..+ +++.++||+||||+|| +|+|+|||+|+||++||+++||.+||+||.|+||+|+|
T Consensus 262 ~~~l~~--~g~~~~f~~--~~~t-~~l~~ld~~IvEC~~~--~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~d~Vt~e~L 334 (343)
T 3rtx_A 262 VGLLYV--GGYERPFAQ--IKVT-KELKQYDNKIIECKFE--NNSWVFMRQRIDKSFPNAYNTAMAVCNSISNPVTKEML 334 (343)
T ss_dssp -----------------------------------------------------------CHHHHHHHHHHHHSCCCHHHH
T ss_pred cceEEE--CCeeeecce--eecc-ccchhcCCEEEEEEEE--CCEEEEEEEcCCCCCCchHHHHHHHHHHHHccCCHHHH
Confidence 12333 343333321 2122 4567899999999997 68999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 006606 607 LNEIQEII 614 (639)
Q Consensus 607 ~~~i~~i~ 614 (639)
+++|++..
T Consensus 335 ~~~i~~~~ 342 (343)
T 3rtx_A 335 FEFIDRCA 342 (343)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99998753
No 2
>3kyh_C MRNA-capping enzyme subunit alpha; 5' modification, triphosphatase, guanylyltransferase, complex, hydrolase, mRNA processing, nucleus; 3.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-66 Score=561.76 Aligned_cols=310 Identities=34% Similarity=0.525 Sum_probs=256.5
Q ss_pred cccCCCCC--CCCCccccccchhhh-hhhcccceeeeecCceeEEEEEEEC------CEEEEEeCCCcccccc-CcCCCc
Q 006606 298 ALHGRGNM--QFPGSHPVSLNSDNL-QLLRQRYYYATWKADGTRYMMLITI------DGCYLIDRCFNFRRVQ-MRFPCR 367 (639)
Q Consensus 298 ~~~~~~~~--~FPGsqPVsl~r~~l-~~l~~~~Y~V~eK~DG~R~ll~i~~------~~vyLidR~~~~~~v~-~~FP~~ 367 (639)
.+|++.+. +|||||||||+|+|| +.|..++|+|||||||+||||++.. ++|||+||+++++.++ ++||..
T Consensus 34 ~l~~~~~~~~~FPGsqPVS~~r~nl~~~L~~~dY~V~eK~DGiR~Ll~i~~~~~~g~g~v~LidR~~~~~~v~~~~FP~~ 113 (461)
T 3kyh_C 34 KLLNSPKPTKTFPGSQPVSFQHSDVEEKLLAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRL 113 (461)
T ss_dssp HHTTSCGGGSSCSSCEEEECCHHHHHHTTSSSCEEEEEEECSEEEEEEEEECTTTCCEEEEEECSSSCEEEECCCCCCCC
T ss_pred HHHCCCCCCCcCCCCcceeecHhhHHHHhccCCEEEEEcccceEEEEEEeccccCCCceEEEEeCCCCeEEcccccCCcc
Confidence 47788766 999999999999999 6799999999999999999999982 5799999999988775 899987
Q ss_pred CCc--ccccccCCCCeEeeEEEEEecCCCCCCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCcccccccccccc
Q 006606 368 NSN--EGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQS 445 (639)
Q Consensus 368 ~~~--~~~~~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~ 445 (639)
.+. +++....+.+||||||||+++.+.++..+++|+|||||+++|++++++||.+|+++|++.|+.|+...++
T Consensus 114 ~~~~~~~~l~~~~~~TlLDGElV~d~~~~~~~~~~~y~~FDlL~~~G~dl~~~pl~eR~~~Le~~I~~P~~~~~~----- 188 (461)
T 3kyh_C 114 PQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLRA----- 188 (461)
T ss_dssp SSCCSSGGGTCCCCSEEEEEEEEEEECTTTCCEEEEEEEEEEEEETTEECSSSBHHHHHHHHHHTTHHHHHHHHH-----
T ss_pred cccchhhhhhccCCCeEEEEEEEeccCCCCCccceEEEEEEEEeECCcCcccCCHHHHHHHHHHHhcccchhhhh-----
Confidence 542 1222345789999999999876533336899999999999999999999999999999998877654331
Q ss_pred CCCCccCCCCCcEEEecceeechhHHHHHHHhcccccCCCceEEEEeCCCCCcc-CCCCCeEEEecCCCceEEEEEEEec
Q 006606 446 RNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVP-RTHEGLLKWKYARMNSVDFLFEVTD 524 (639)
Q Consensus 446 ~~p~~~~~~~pf~I~~K~~~~~~~~~~l~~~~~~~l~h~~DGLIf~p~~spY~~-G~~~~llKWKp~~~nTvDF~l~~~~ 524 (639)
.+| +....+||.|+.|+|+.++.++++|+ +++++.|++||||||+.++||.+ ||+..||||||+++|||||+|.+..
T Consensus 189 ~~p-~~~~~~pF~V~~K~~~~~~~~~~l~~-~~~~l~~~~EGLv~k~~~spY~~Ggr~~~~lKwKp~~~nTVDF~L~i~~ 266 (461)
T 3kyh_C 189 AYP-NRCTTFPFKISMKHMDFSYQLVKVAK-SLDKLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKLILDI 266 (461)
T ss_dssp HCS-TTCSCCCSEEEECCCEEGGGHHHHHH-HHTTCSSCEEEEEEEESSSBCCSSSEEEEEEECCCTTTCCCEEEEECCC
T ss_pred ccc-cccccCCcEEEeccchhhhhHHHHHH-hhhhccCCCCeEEEEeCCCCCcCCCcCCCeEEEEcCCCeeEEEEEEecc
Confidence 233 23467899999999999999999998 67899999999999999999999 6899999999999999999998752
Q ss_pred C----------------------CceeEEEEeCCee---------ee--------ecCce-----eEecCC-------CC
Q 006606 525 D----------------------DRQLLYVFERGKK---------KL--------MEGSS-----VEFTDR-------EP 553 (639)
Q Consensus 525 ~----------------------~~~~L~~~~~g~~---------~~--------~~~~~-----~~f~~~-------~~ 553 (639)
. ..+.|||+.+|.. .+ ++... +.+++. ..
T Consensus 267 ~~~~~~~~~~~~~~~~y~dy~~~p~~~L~v~~gg~~~~~~~~~~~~~f~~~~~~~l~~~~~~f~~l~~t~~ew~~lk~~~ 346 (461)
T 3kyh_C 267 PMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLE 346 (461)
T ss_dssp C------------------CCSCCCCEEEEECTTCHHHHHHHHTTCSCTTTTHHHHTTTEEEEEECCCCTTTHHHHHHSC
T ss_pred cccCCCcccccccccccccccccceeEEEEEeCCcccccccccccccccchhhhcccccceecceeeecHHHHHHHhhcc
Confidence 0 0356888877621 01 11112 223322 24
Q ss_pred CCCCceEEEEEEeCCCCeeEEEEEeCCCCCCChHHHHHHHHHhcccCCCHHHHHHHHHHHh
Q 006606 554 SFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEII 614 (639)
Q Consensus 554 ~~~dg~IvEc~~d~~~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~d~It~e~L~~~i~~i~ 614 (639)
+++||+||||+||+++|+|+|||+|+||++||+++||.+||+||.++||+|+|+..|++|.
T Consensus 347 ~~ld~~IvEC~~d~~~~~W~~~R~R~DK~~pN~~~tv~~vleSI~d~Vt~e~L~~~~~~i~ 407 (461)
T 3kyh_C 347 QPLNGRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIK 407 (461)
T ss_dssp CCCTTEEEEECCCTTTSSCCEEEECTTSSSCCCHHHHHHHHHHHHHCCCSHHHHTTTHHHH
T ss_pred CCCCCEEEEEEEeCCCCeEEEEEECCCCCCCCchHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 5699999999999999999999999999999999999999999999999999998777654
No 3
>1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3
Probab=100.00 E-value=3.2e-58 Score=498.88 Aligned_cols=312 Identities=31% Similarity=0.511 Sum_probs=251.8
Q ss_pred cccCCCCCCCCCccccccchhhh-hhhcccceeeeecCceeEEEEEE-----ECCEEEEEeCCCcccccc-CcCCCcCCc
Q 006606 298 ALHGRGNMQFPGSHPVSLNSDNL-QLLRQRYYYATWKADGTRYMMLI-----TIDGCYLIDRCFNFRRVQ-MRFPCRNSN 370 (639)
Q Consensus 298 ~~~~~~~~~FPGsqPVsl~r~~l-~~l~~~~Y~V~eK~DG~R~ll~i-----~~~~vyLidR~~~~~~v~-~~FP~~~~~ 370 (639)
.+|+++..+|||+|||||+++++ +.|...+|+||||+||+|+++++ .++++||+||+++++.++ .+||.....
T Consensus 31 ~l~~~~~~~FPg~~Pvsl~~~~l~~~l~~~~~~ve~K~DG~R~ll~~~~~~~~g~~v~L~sR~~~~~~i~~~~FP~~~~~ 110 (395)
T 1p16_A 31 ELLGRRNTGFPGSQPVSFERRHLEETLMQKDYFVCEKTDGLRCLLFLINDPDKGEGVFLVTRENDYYFIPNIHFPLSVNE 110 (395)
T ss_dssp HHHTCSCCSCCCEEEEECCHHHHHTHHHHSCEEEEEEECSEEEEEEEEEETTTEEEEEEEETTCCEEECCSCCCCSCTTC
T ss_pred HHHCCCCCCCCCCceecccHHHHHHhhCcCCEEEEECccceEEEEEEeecccCCCEEEEEeCCCceEEeccccCCccccc
Confidence 46789999999999999999999 78888899999999999999999 346799999999977665 799986543
Q ss_pred ccccccCCCCeEeeEEEEEecCCCCCCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCC-C
Q 006606 371 EGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNP-Y 449 (639)
Q Consensus 371 ~~~~~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p-~ 449 (639)
..-.+..+.+|+||||||++..++. +.+++|+|||||+++|++++++||.+|+++|+++++.|+...++ .+| .
T Consensus 111 ~~~~~~~~~~~vLDGElV~~~~~~~-~~~~~f~~FDlL~~~G~dl~~~pl~eR~~~L~~~i~~~~~~~~~-----~~~~~ 184 (395)
T 1p16_A 111 TREKPTYHHGTLLDGELVLENRNVS-EPVLRYVIFDALAIHGKCIIDRPLPKRLGYITENVMKPFDNFKK-----HNPDI 184 (395)
T ss_dssp CSSSCCCCSSEEEEEEEEEECCSSS-CCEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHTHHHHHHHHH-----HCHHH
T ss_pred ccchhccCCcceeeeEEEEeccCCC-cceeEEEEEEEEEECCeEcccCCHHHHHHHHHHHhhcccHhhhh-----cCccc
Confidence 1000123678999999999875432 25789999999999999999999999999999988766432210 011 0
Q ss_pred ccCCCCCcEEEecceeechhHHHHHHHhcccccCCCceEEEEeCCCCCccCCCCCeEEEecCCCceEEEEEEEec-----
Q 006606 450 YRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTD----- 524 (639)
Q Consensus 450 ~~~~~~pf~I~~K~~~~~~~~~~l~~~~~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKp~~~nTvDF~l~~~~----- 524 (639)
.....+||.|+.++++++++++.+|+. ++.+.|++||||||+.++||.+|++..||||||++.|||||+|....
T Consensus 185 ~~~~~~pf~v~~~~~~~~~~~~~~~~~-~~~~~~g~EGlI~K~~ds~Y~~Gr~~~wlKwK~~~~~TvDfvl~~~~~~~~~ 263 (395)
T 1p16_A 185 VNSPEFPFKVGFKTMLTSYHADDVLSK-MDKLFHASDGLIYTCAETPYVFGTDQTLLKWKPAEENTVDFQLEFVFNEVQD 263 (395)
T ss_dssp HSCTTSCCEEEECCCEEGGGTHHHHTT-GGGCSSCEEEEEEEESSSCCCSEEEEEEEEECCGGGCCEEEEEEEECEEEEC
T ss_pred cccccCceEEEEecchhHHHHHHHHHH-HHhcCCCCCeEEEEeCCCCcCCCCccceEEEecCCCeEEEEEEEEEeccccc
Confidence 123467999999999999998888875 47788999999999999999999999999999999999999997531
Q ss_pred -----CCc-------------eeEEEEeCCee-eeecCceeEecC-------CCCCCCCceEEEEEEe-CCCCeeEEEEE
Q 006606 525 -----DDR-------------QLLYVFERGKK-KLMEGSSVEFTD-------REPSFYSGKIIECTWD-PDVQLWKCMRI 577 (639)
Q Consensus 525 -----~~~-------------~~L~~~~~g~~-~~~~~~~~~f~~-------~~~~~~dg~IvEc~~d-~~~~~W~~~R~ 577 (639)
.++ ..|+++.+|+. .++. .+.|++ .....++|+||||.|+ +++|.|+|+|+
T Consensus 264 ~~~~g~G~~~~~~dy~~~p~~~~l~v~~~~~~~~~f~--~~~ltd~e~~~l~~~~~~~~~~IvEc~~~~~~~g~wr~~R~ 341 (395)
T 1p16_A 264 PDLDERDPTSTYLDYDAKPNLIKLRVWQGSNVHTDFA--KLDLSDDDWERLKALEQPLQGRIAECRQSTTKKGYWEMLRF 341 (395)
T ss_dssp TTSCTTSTTCEEEECSSCCSEEEEEEECSTTCEEEEE--EECCCHHHHHHHHHSSSCCTTCEEEEEECSSSTTEEEEEEE
T ss_pred ccccccCccccccccccccceeEEEEEeCCcccceee--EEEeCHHHHHHhHhhcccCCCEEEEEEeecCCCCccEEEEE
Confidence 111 34667766533 2222 233433 1256789999999998 67899999999
Q ss_pred eCCCCCCChHHHHHHHHHhcccCCCHHHHHHHHHHHhcCcc
Q 006606 578 RTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEIIRLPM 618 (639)
Q Consensus 578 R~DK~~pN~~~tv~~v~~SI~d~It~e~L~~~i~~i~~~~~ 618 (639)
|+||+.||+++||.+||+||.++||+|+|++++++|..-..
T Consensus 342 R~DK~~pN~~~t~~~vl~si~~~vt~eeL~~~~~~~~~~w~ 382 (395)
T 1p16_A 342 RNDKSNGNHISVVEKILVSIKDGVKEKEVIEWCPKISRAWK 382 (395)
T ss_dssp CTTCSSCCBHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred eCCCCCcChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998744333
No 4
>1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} SCOP: b.40.4.6 d.142.2.3 PDB: 1ckn_A* 1cko_A* 1ckn_B*
Probab=100.00 E-value=1.4e-54 Score=458.98 Aligned_cols=275 Identities=24% Similarity=0.440 Sum_probs=229.3
Q ss_pred ccCCCCCCCCCccccccchhhhhhhcccceeeeecCceeEEEEEEE---C-CEEEEEeCCCccccccCcCCCcCCccccc
Q 006606 299 LHGRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLIT---I-DGCYLIDRCFNFRRVQMRFPCRNSNEGLG 374 (639)
Q Consensus 299 ~~~~~~~~FPGsqPVsl~r~~l~~l~~~~Y~V~eK~DG~R~ll~i~---~-~~vyLidR~~~~~~v~~~FP~~~~~~~~~ 374 (639)
+|+|++.+|||+|||||++++++.|...+|+||||+||+|++|+++ + +++||+||+++.+ +..||....
T Consensus 48 ~~~~~~~~Fpg~~Pv~~~~~~~~~L~~~~y~ve~K~DG~R~ll~~~~~~g~g~v~L~sR~~~~~--t~~fp~~~~----- 120 (330)
T 1ckm_A 48 MDDHKFPRLPGPNPVSIERKDFEKLKQNKYVVSEKTDGIRFMMFFTRVFGFKVCTIIDRAMTVY--LLPFKNIPR----- 120 (330)
T ss_dssp TCCCSSCCCSSEEEEECCGGGHHHHHHSCEEEEEEECSEEEEEEEEEETTEEEEEEECTTCCEE--ECCCSCCCT-----
T ss_pred hcCCCCCCCCCCceeCcchHHHhhCCcCCEEEEECcceEEEEEEEEecCCCCEEEEEeCCCCEE--eccChhhhh-----
Confidence 5799999999999999999999999888999999999999999998 4 6699999999855 446775421
Q ss_pred ccCCCCeEeeEEEEEecCCCCCCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCC
Q 006606 375 EKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDL 454 (639)
Q Consensus 375 ~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~ 454 (639)
..+.+|+||||||++..+ ..++|++||||+++|++++++||.+|+++|++.+..+. ....
T Consensus 121 -~~~~~~vLDGElv~~~~~----~~~~f~vFDlL~~~G~dl~~~pl~eRr~~L~~~l~~~~---------------~~~~ 180 (330)
T 1ckm_A 121 -VLFQGSIFDGELCVDIVE----KKFAFVLFDAVVVSGVTVSQMDLASRFFAMKRSLKEFK---------------NVPE 180 (330)
T ss_dssp -TGGGCEEEEEEEEEETTT----TEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHHTTCC---------------CCTT
T ss_pred -ccCCCeeEEEEEEEEcCC----CeEEEEEEeeeeeCCcccccCCHHHHHHHHHHHHhhhc---------------ccCC
Confidence 235799999999998642 24899999999999999999999999999999773211 0124
Q ss_pred CCcEEEecceeechhHHHHHHHhcccccC--CCceEEEEeCCCCCccCCCCCeEEEecCCCceEEEEEEEecCCceeEEE
Q 006606 455 EPFRVRRKDFWLLSTVNKLLKEFIPKLSH--DADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLLYV 532 (639)
Q Consensus 455 ~pf~I~~K~~~~~~~~~~l~~~~~~~l~h--~~DGLIf~p~~spY~~G~~~~llKWKp~~~nTvDF~l~~~~~~~~~L~~ 532 (639)
.||.|..++++++ .++++|+++.+.+.| ++||||||+.++||.+|++..||||||++.+|+||+|. ..+++..|++
T Consensus 181 ~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~yg~EGlI~K~~dspY~~Gr~~~~lKwK~~~~~tvDfvi~-~g~g~~gl~~ 258 (330)
T 1ckm_A 181 DPAILRYKEWIPL-EHPTIIKDHLKKANAIYHTDGLIIMSVDEPVIYGRNFNLFKLKPGTHHTIDFIIM-SEDGTIGIFD 258 (330)
T ss_dssp SSSEEEECCCEET-TCHHHHHHHHHHHHHHSCEEEEEEEESSSCCCCEEEEEEEEECSTTCCCEEEEEC-STTCCEEEEE
T ss_pred CCeEEEEEEEEeh-hHHHHHHHHHHHHhccCCCceEEEeeCCCcccCCCccCeEEEEeCCCceEEEEEE-ccCCeEEEEe
Confidence 5788999999999 888999877788889 99999999999999999999999999999999999996 3333444544
Q ss_pred EeCCeeeeecCceeEecCCCCCCCCceEEEEEEeCCCCeeEEEEEeCCCCCCChHHHHHHHHHhcccCCCHHHHHHHHH
Q 006606 533 FERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQ 611 (639)
Q Consensus 533 ~~~g~~~~~~~~~~~f~~~~~~~~dg~IvEc~~d~~~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~d~It~e~L~~~i~ 611 (639)
+..|.. ++|.....+.++|+||||.|+ +|.|+|+|+|+||+.||+++|+++|++||.++||+|+|+++|+
T Consensus 259 ~~~~~~-------vp~~~~~k~~~~g~IvE~~~~--~G~wr~~R~R~DK~~~n~~~t~~~v~~si~~~vt~eeL~~~~~ 328 (330)
T 1ckm_A 259 PNLRKN-------VPVGKLDGYYNKGSIVECGFA--DGTWKYIQGRSDKNQANDRLTYEKTLLNIEENITIDELLDLFK 328 (330)
T ss_dssp TTTTEE-------EECCCCSSCCCTTCEEEEEEE--TTEEEEEEECTTCSSCCBHHHHHHHHHHHHHCCCHHHHTTCC-
T ss_pred CCCCce-------eeeeeeehhhcCCeEEEEEEE--CCceEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCHHHHHHhhc
Confidence 332332 233321122289999999998 6899999999999999999999999999999999999987654
No 5
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=100.00 E-value=3.4e-36 Score=305.42 Aligned_cols=194 Identities=39% Similarity=0.773 Sum_probs=176.0
Q ss_pred CCCCCCCCCccCCCCCCcccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhc
Q 006606 82 DRNKLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKK 161 (639)
Q Consensus 82 ~~~~~p~~W~~~~~~g~~I~~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~ 161 (639)
..+.+|.+|++||++|+.|+++|||||+|+++.++..+..+++|+++++++.++..+.+|++||||+++.++|+++.+++
T Consensus 24 ~~~~~p~~Wl~~p~~g~~I~~rfia~~~P~~~~~~~~v~~~~r~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~ 103 (241)
T 2c46_A 24 AHNKIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEK 103 (241)
T ss_dssp TTCCCCTTCTTSCSBCCCBTTTEEEECCCCCGGGGGGSCGGGCCCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHT
T ss_pred cCCCCChhhhcCCCCCCEeCCcEEEecCCcccchhhhccHhhcCCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHH
Confidence 57899999999999999999999999999999999889888999999999999988889999999999888999999999
Q ss_pred CCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhc
Q 006606 162 EGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEV 241 (639)
Q Consensus 162 ~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s~~eAi~~~~~~ 241 (639)
.||+|+++|+.|++.+|+.+.+..|++.+.+++++ .++++|+|||++|+||||++||||||+..||++++|++.|+++
T Consensus 104 ~gi~y~~~p~~D~~~~P~~~~l~~~~~~i~~~~~~--~~~~~VlVHC~aG~gRTGt~ia~yLm~~~~~s~~eAi~~vr~~ 181 (241)
T 2c46_A 104 EGIKYIKLQCKGHGECPTTENTETFIRLCERFNER--NPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQA 181 (241)
T ss_dssp TTCEEEECCCCCTTCCCCHHHHHHHHHHHTTC-------CEEEEEECSSSSHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCCCCCChHHHHHHHHHHHHHHHh--CCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 99999999999866799999999999988888763 3578999999999999999999999999999999999999999
Q ss_pred CCCccCCHHHHHHHHHHHhhcCCCCCCCCCCCccccc
Q 006606 242 RPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKRE 278 (639)
Q Consensus 242 Rp~~i~~~~~l~~L~~~y~~~~~~~~~~p~~P~W~~~ 278 (639)
||.++++.+|+++|+++|..... ...+++.|+|...
T Consensus 182 R~~~i~~~~~l~~L~~~~~~~~~-~~~~~~~p~W~~~ 217 (241)
T 2c46_A 182 RPPGIYKGDYLKELFRRYGDIEE-APPPPLLPDWCFE 217 (241)
T ss_dssp STTCCCCHHHHHHHHHHHSCGGG-CCCCCCCCTTCCC
T ss_pred CCCCCCCHHHHHHHHHHHhhccc-CCCCCCccchhcc
Confidence 99999999999999999987543 4678899999763
No 6
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=100.00 E-value=1.3e-32 Score=264.01 Aligned_cols=166 Identities=31% Similarity=0.572 Sum_probs=151.9
Q ss_pred CCCCCCCccCCCCCCcccC-ceeecCCCCccccccCCCC-CCCCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhc
Q 006606 84 NKLPPGWLDCPPFGQEIGG-CIIPSKVPLSEFFNDCIPP-GKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKK 161 (639)
Q Consensus 84 ~~~p~~W~~~~~~g~~I~~-~fip~K~Pl~~~~~~~i~~-~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~ 161 (639)
+++|++|++|+++|++|++ +||+|++|+++.+...+.. .++|++.++++. +.+|++||||+.+.+.|+++.+..
T Consensus 1 ~~~p~~w~~~~~~g~~i~~~~~i~~~~P~~~~~~~~~~~~~~~~~~~~ll~~----~~gi~~Vi~l~~~~~~~~~~~~~~ 76 (169)
T 1yn9_A 1 HMFPARWHNYLQCGQVIKDSNLICFKTPLRPELFAYVTSEEDVWTAEQIVKQ----NPSIGAIIDLTNTSKYYDGVHFLR 76 (169)
T ss_dssp -CCCTTGGGSCSBCCCCTTSSEEEECCCCCGGGGTTBCCGGGCCCHHHHHHH----CTTEEEEEECCSCSCSCCTHHHHH
T ss_pred CCCChhhhhCCCCCCCcCCCeeEEecCcchHhHhhcCCCcccCCCHHHHHhh----CCCcCEEEEcCCCCCCCCHHHHHh
Confidence 3799999999999999976 7999999999988877766 789999999874 468999999998888899999999
Q ss_pred CCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhc
Q 006606 162 EGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEV 241 (639)
Q Consensus 162 ~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s~~eAi~~~~~~ 241 (639)
.||+|+++|+.|+ .+|+.+.+..|++.+.+|+.+ ..+++|+|||++|+||||+++|+|||...||++++|++.|+++
T Consensus 77 ~gi~~~~~~~~d~-~~p~~~~~~~~~~~~~~~~~~--~~~~~vlVHC~aG~~RTg~~va~~L~~~~~~~~~~a~~~~r~~ 153 (169)
T 1yn9_A 77 AGLLYKKIQVPGQ-TLPPESIVQEFIDTVKEFTEK--CPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAIDRFEKA 153 (169)
T ss_dssp TTCEEEECCCCSS-SCCCHHHHHHHHHHHHHHHHH--STTSEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCC-CCCCHHHHHHHHHHHHHHHHh--CCCCcEEEECCCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 9999999999986 688889999999999999874 4688999999999999999999999998899999999999999
Q ss_pred CCCccCCHHHHHHHH
Q 006606 242 RPPGIYKNEYIEALY 256 (639)
Q Consensus 242 Rp~~i~~~~~l~~L~ 256 (639)
||.++++.+|++||+
T Consensus 154 R~~~~~~~~f~~qL~ 168 (169)
T 1yn9_A 154 RGHKIERQNYVQDLL 168 (169)
T ss_dssp HTSCCCCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHh
Confidence 999999999999996
No 7
>2cfm_A Thermostable DNA ligase; protein-nucleotide complex, cell cycle, cell division, DNA damage, DNA recombination, DNA repair, DNA replication; HET: AMP; 1.8A {Pyrococcus furiosus} PDB: 3rr5_A*
Probab=99.91 E-value=1.2e-24 Score=245.22 Aligned_cols=164 Identities=18% Similarity=0.243 Sum_probs=127.0
Q ss_pred ceeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCcCCcccccccC-CCCeEeeEEEEEecCCCCC---------
Q 006606 327 YYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKT-HHFTLLDGEMIIDKLPDSR--------- 396 (639)
Q Consensus 327 ~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~-~~~tlLDGElV~d~~~~~~--------- 396 (639)
+|++++|+||+|+++++.+++++|++|++.. ++..||..... +.+.. ..+++||||||.....+..
T Consensus 243 ~~~~E~K~DG~R~~i~~~~g~v~l~SR~g~~--~t~~fPel~~~--~~~~l~~~~~iLDGElv~~d~~g~~~~F~~L~~r 318 (561)
T 2cfm_A 243 EAEFEIKYDGARVQVHKDGSKIIVYSRRLEN--VTRAIPEIVEA--LKEAIIPEKAIVEGELVAIGENGRPLPFQYVLRR 318 (561)
T ss_dssp CEEEEEECCSEEEEEEEETTEEEEECTTCCB--CGGGCHHHHHH--HHHHBCSSEEEEEEEEEEBCTTSSBCCTHHHHHH
T ss_pred cEEEEEeEceEEEEEEEECCEEEEEeCCCCC--chhhhhhHHHH--HHHhCCCcceEeeeEEEEEcCCCcccCHHHHHHH
Confidence 8999999999999999999999999999983 46788875321 11012 3689999999996421110
Q ss_pred ------------CceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecce
Q 006606 397 ------------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDF 464 (639)
Q Consensus 397 ------------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~ 464 (639)
..+++|++||||++||++++++||.+|+++|++.+... + .+...++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~vFDlL~l~g~~l~~~pl~eRr~~L~~~~~~~-------------~---------~i~~~~~ 376 (561)
T 2cfm_A 319 FRRKHNIEEMMEKIPLELNLFDVLYVDGQSLIDTKFIDRRRTLEEIIKQN-------------E---------KIKVAEN 376 (561)
T ss_dssp HHCCSCHHHHHHHSCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCC-------------S---------SEEECCE
T ss_pred hhcccchhhhcccCceEEEEEEEEeECCcCcccCCHHHHHHHHHHHhCcC-------------C---------cEEEeee
Confidence 12478999999999999999999999999999876321 1 1445555
Q ss_pred eechh---HHHHHHHhcccccCCCceEEEEeCCCCCccC-CCCCeEEEecCCCceEEEEE
Q 006606 465 WLLST---VNKLLKEFIPKLSHDADGLVFQGWDDPYVPR-THEGLLKWKYARMNSVDFLF 520 (639)
Q Consensus 465 ~~~~~---~~~l~~~~~~~l~h~~DGLIf~p~~spY~~G-~~~~llKWKp~~~nTvDF~l 520 (639)
+...+ +..+|+. ...++.||||+|+.++||.+| ++..|+||||.. +|+||.|
T Consensus 377 ~~~~~~~~~~~~~~~---~~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~~-dt~D~vV 432 (561)
T 2cfm_A 377 LITKKVEEAEAFYKR---ALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTM-ENLDLVI 432 (561)
T ss_dssp EEESCHHHHHHHHHH---HHHTTCCEEEEECTTCCCCTTCEEEEEEEECSSC-CCEEEEE
T ss_pred EEcCCHHHHHHHHHH---HHHcCCceeEEeCCCCCCCCCCcCCCeEEEcccC-cceeEEE
Confidence 55544 4445553 577999999999999999999 577899999975 8999998
No 8
>2hiv_A Thermostable DNA ligase; ATP-dependent, open conformation; 2.05A {Sulfolobus solfataricus} PDB: 2hix_A*
Probab=99.90 E-value=3.7e-23 Score=235.46 Aligned_cols=165 Identities=16% Similarity=0.236 Sum_probs=127.9
Q ss_pred ceeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCcCCcccccccC-CCCeEeeEEEEEecC-CCCC--------
Q 006606 327 YYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKT-HHFTLLDGEMIIDKL-PDSR-------- 396 (639)
Q Consensus 327 ~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~-~~~tlLDGElV~d~~-~~~~-------- 396 (639)
+|++++|+||+|+++++.+++++|++|+++. ++..||..... +.+.. ..++|||||||.... .+..
T Consensus 274 ~~~~E~K~DG~R~qi~~~g~~v~l~SR~g~~--~t~~fP~l~~~--~~~~l~~~~~iLDGElv~~d~~~g~~l~F~~L~~ 349 (621)
T 2hiv_A 274 NAIVDYKYDGERAQIHKKEDKIFIFSRRLEN--ITSQYPDVVDY--VSKYIEGKEFIIEGEIVAIDPESGEMRPFQELMH 349 (621)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEEECTTCCB--CGGGCHHHHHH--HHHHBCCSSEEEEEEEEEBCTTTCCBCCTHHHHH
T ss_pred cEEEEEEEcceeEEEEEcCCEEEEEcCCCcC--cHhhhhhHHHH--HHHhCCCcCeEEeEEEEEeecCCCCcCCHHHHhh
Confidence 8999999999999999999999999999983 36678875321 10012 368999999999641 1110
Q ss_pred ------------CceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecce
Q 006606 397 ------------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDF 464 (639)
Q Consensus 397 ------------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~ 464 (639)
..+++|++||||++||++++++||.+|+++|++.+... + .+...++
T Consensus 350 r~~~~~~~~~~~~~~v~~~vFDlL~l~G~~l~~~pl~eRr~~L~~~~~~~-------------~---------~i~~~~~ 407 (621)
T 2hiv_A 350 RKRKSDIYEAIKEYPVNVFLFDLMYYEDVDYTTKPLEARRKLLESIVKPN-------------D---------YVKIAHH 407 (621)
T ss_dssp HHHCSCHHHHHHHSCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCC-------------S---------SEEECCE
T ss_pred hccccchhhhcccCceEEEEEeccccCCCccccCCHHHHHHHHHHHhCcC-------------C---------cEEEeee
Confidence 12578999999999999999999999999999976321 0 1444555
Q ss_pred eechh---HHHHHHHhcccccCCCceEEEEeC--CCCCccC-CCCCeEEEecCCCc----eEEEEE
Q 006606 465 WLLST---VNKLLKEFIPKLSHDADGLVFQGW--DDPYVPR-THEGLLKWKYARMN----SVDFLF 520 (639)
Q Consensus 465 ~~~~~---~~~l~~~~~~~l~h~~DGLIf~p~--~spY~~G-~~~~llKWKp~~~n----TvDF~l 520 (639)
+...+ +..+|+. .+.++.||||+|+. ++||.+| |+..|+||||..++ |+||.|
T Consensus 408 ~~~~~~~~~~~~~~~---~~~~g~EGlv~K~~~~ds~Y~~G~Rs~~WlK~K~~~~~~~~dt~D~vV 470 (621)
T 2hiv_A 408 IQANNVEDLKSFFYR---AISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVV 470 (621)
T ss_dssp EEESSHHHHHHHHHH---HHHTTCCEEEEECCSTTCCCCTTCEEEEEEEEETTCTTSSCEEEEEEE
T ss_pred EEeCCHHHHHHHHHH---HHhcCCceEEEEecCCCCCccCCCcCCCeEEEechhccCcCceeEEEE
Confidence 55543 4455553 57799999999999 9999999 57899999998765 999998
No 9
>1vs0_A Putative DNA ligase-like protein RV0938/MT0965; OB fold, nucleotidyl transferase, structural genomic protein structure initiative; HET: APK MSE; 2.40A {Mycobacterium tuberculosis}
Probab=99.90 E-value=1.6e-23 Score=220.02 Aligned_cols=163 Identities=17% Similarity=0.225 Sum_probs=126.4
Q ss_pred cccceeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCcCCc-ccccccCCCCeEeeEEEEEecCCCCC------
Q 006606 324 RQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSN-EGLGEKTHHFTLLDGEMIIDKLPDSR------ 396 (639)
Q Consensus 324 ~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~-~~~~~~~~~~tlLDGElV~d~~~~~~------ 396 (639)
...+|++++|+||+|+++++.+++++|++|+++. ++..||+.... ..+ ...+++||||||.....+..
T Consensus 23 ~~~~~~~E~K~DG~R~~~~~~~g~v~l~SR~g~~--~t~~fPel~~~~~~l---~~~~~iLDGElv~~d~~g~~~F~~l~ 97 (310)
T 1vs0_A 23 KASQWAFEGXWDGYRLLVEADHGAVRLRSRSGRD--VTAEYPQLRALAEDL---ADHHVVLDGEAVVLDSSGVPSFSQMQ 97 (310)
T ss_dssp CTTTEEEEEECCSEEEEEEEETTEEEEEETTCCB--CGGGCGGGHHHHHHT---TTCEEEEEEEEECBCTTSCBCHHHHH
T ss_pred CCCCEEEEEccCcEEEEEEEECCEEEEEcCCCCC--chhhchhHHHHHHhC---CCccEEEeeEEEEECCCCCcCHHHHH
Confidence 3568999999999999999999999999999984 37788875432 111 12479999999996432211
Q ss_pred ----CceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecceeechhHHH
Q 006606 397 ----RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNK 472 (639)
Q Consensus 397 ----~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~~~~~~~~ 472 (639)
...++|++||||++||++++++||.+|+++|++.+...+ +...+++.. .+..
T Consensus 98 ~r~~~~~~~~~vFDll~~~g~~l~~~pl~eRr~~L~~~~~~~~-----------------------i~~~~~~~~-~~~~ 153 (310)
T 1vs0_A 98 NRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATS-----------------------LTVPELLPG-DGAQ 153 (310)
T ss_dssp TCCTTSCCEEEEEEEEEETTEECTTSCHHHHHHHHHHHHHHSC-----------------------CCCCCCCCS-SHHH
T ss_pred hhccCCcEEEEEEEeEEECCcCcccCCHHHHHHHHHHhccCCc-----------------------EEECccCch-HHHH
Confidence 124799999999999999999999999999999764211 111222222 3566
Q ss_pred HHHHhcccccCCCceEEEEeCCCCCccC-CCCCeEEEecCCCceEEEEE
Q 006606 473 LLKEFIPKLSHDADGLVFQGWDDPYVPR-THEGLLKWKYARMNSVDFLF 520 (639)
Q Consensus 473 l~~~~~~~l~h~~DGLIf~p~~spY~~G-~~~~llKWKp~~~nTvDF~l 520 (639)
+|+. ...++.||||+|+.++||.+| ++..|+|||+. +|+||.|
T Consensus 154 ~~~~---~~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~--~~~D~vv 197 (310)
T 1vs0_A 154 AFAC---SRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHW--NTQEVVI 197 (310)
T ss_dssp HHHH---HHHTTCCEEEEEETTCCCCTTCEEEEEEEEESS--EEEEEEE
T ss_pred HHHH---HHHcCCceEEEeCCCCCcCCCCcChHHhccchh--eEEEEEE
Confidence 7765 467999999999999999999 67899999986 7999988
No 10
>1x9n_A DNA ligase I; 5'-adenylated nicked DNA, protein-DNA complex, L complex; HET: DNA DOC AMP; 3.00A {Homo sapiens} SCOP: a.235.1.1 b.40.4.6 d.142.2.1
Probab=99.90 E-value=5.6e-23 Score=235.84 Aligned_cols=173 Identities=15% Similarity=0.207 Sum_probs=128.2
Q ss_pred hhcccceeeeecCceeEEEEEEECC-EEEEEeCCCccccccCcCCCcCCc-ccccccCCCCeEeeEEEEEecCCCC----
Q 006606 322 LLRQRYYYATWKADGTRYMMLITID-GCYLIDRCFNFRRVQMRFPCRNSN-EGLGEKTHHFTLLDGEMIIDKLPDS---- 395 (639)
Q Consensus 322 ~l~~~~Y~V~eK~DG~R~ll~i~~~-~vyLidR~~~~~~v~~~FP~~~~~-~~~~~~~~~~tlLDGElV~d~~~~~---- 395 (639)
.+...+|++++|+||+|++++++++ .++|++|+++. ++..||..... ..+......++|||||||.....+.
T Consensus 326 ~~~~~~~~~E~K~DG~R~qih~~~~g~v~l~SR~g~d--~t~~fPel~~~l~~~~~~~~~~~ILDGElV~~d~~~g~~~~ 403 (688)
T 1x9n_A 326 RFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQED--NTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQP 403 (688)
T ss_dssp HTTTSCEEEEEEESSEEEEEEECTTSCEEEECTTSCB--CTTTCHHHHHTSGGGBCTTCCCEEEEEEEEEECTTTCSBCC
T ss_pred hcCCCeEEEEEccccEeEEEEEcCCCeEEEEeCCCCc--ccccchHHHHHHHHhhccCCCCeEEeEEEEEEeCCCCCcCC
Confidence 3455689999999999999999754 69999999984 46788875321 1111112468999999999532111
Q ss_pred ----------------CCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEE
Q 006606 396 ----------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRV 459 (639)
Q Consensus 396 ----------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~pf~I 459 (639)
...+++|++||||++||++++++||.+|+++|++.+.... + .+
T Consensus 404 F~~L~~r~r~~~~~~~~~~~v~~~vFDlL~l~G~~l~~~Pl~eRr~~L~~~~~~~~------------~---------~i 462 (688)
T 1x9n_A 404 FQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETE------------G---------EF 462 (688)
T ss_dssp HHHHTTSCSSCCCGGGCCSEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCBT------------T---------TE
T ss_pred HHHHHHHhhcccchhhcccceEEEEEechhhcCCccccCCHHHHHHHHHHhhccCC------------C---------cE
Confidence 0135899999999999999999999999999999763210 0 13
Q ss_pred Eecceeechh---HHHHHHHhcccccCCCceEEEEeC--CCCCccC-CCCCeEEEecCC----CceEEEEE
Q 006606 460 RRKDFWLLST---VNKLLKEFIPKLSHDADGLVFQGW--DDPYVPR-THEGLLKWKYAR----MNSVDFLF 520 (639)
Q Consensus 460 ~~K~~~~~~~---~~~l~~~~~~~l~h~~DGLIf~p~--~spY~~G-~~~~llKWKp~~----~nTvDF~l 520 (639)
...+++...+ +..+|+. .+.++.||||+|+. ++||.+| ++..||||||.. .+|+||.|
T Consensus 463 ~~~~~~~~~~~~~~~~~~~~---a~~~g~EGlV~K~~~~ds~Y~~GkRs~~WlK~K~~y~~~~~dt~D~vV 530 (688)
T 1x9n_A 463 VFATSLDTKDIEQIAEFLEQ---SVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVV 530 (688)
T ss_dssp EECCEECCCCHHHHHHHHHH---HHHTSEEEEEEEESSSSCSSCTTTCSEEEEEEEHHHHHSSCEEEEEEE
T ss_pred EEEeeEecCCHHHHHHHHHH---HHhcCCceeEEeecccCCCCCCCCcCchHheeehhhhccccccccEEE
Confidence 4444444443 4455553 56799999999999 8999998 577999999965 37999987
No 11
>3gde_A DNA ligase; DNA-binding domain, adenylation domain, OB-fold domain, ATP-binding, cell cycle, cell division, DNA damage, DNA recombination; HET: DNA; 2.30A {Archaeoglobus fulgidus}
Probab=99.87 E-value=6.2e-22 Score=222.50 Aligned_cols=164 Identities=23% Similarity=0.342 Sum_probs=124.7
Q ss_pred cceeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCcCCcccccccCCCCeEeeEEEEEecCCCC----------
Q 006606 326 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDS---------- 395 (639)
Q Consensus 326 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~~~---------- 395 (639)
.+|++++|+||+|+++++.++.+.+++|++. .++..||+.... +......+++||||||....+..
T Consensus 245 ~~~~~E~K~DG~R~qi~~~g~~v~l~SR~g~--d~t~~fPel~~~--~~~~l~~~~iLDGElv~~~~g~~~~F~~L~~r~ 320 (558)
T 3gde_A 245 RTAAVEWKFDGSRVQVHWDGSRVTIYSRRLE--NVTNALPDIVEE--IKKSVKPGVILDGEVIAVKEGKPMPFQHVLRRF 320 (558)
T ss_dssp SSEEEEEECSSEEEEEEECSSCCEEEETTCC--BCGGGCHHHHHH--HHHHBCSSEEEEEEEEEEETTEEECHHHHHHHH
T ss_pred cceEEEEeEeeEEEEEEEeCCEEEEEcCCCC--cccccchHHHHH--HHhhCCCCeEEEeEEEEcCCCcCCCHHHHHHHh
Confidence 5899999999999999999889999999998 446788875321 10112345999999998632210
Q ss_pred --C--------CceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEeccee
Q 006606 396 --R--------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFW 465 (639)
Q Consensus 396 --~--------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~ 465 (639)
. ..+++|++||+|++|| +++++||.+|+++|++.+..+ +. |...+.+
T Consensus 321 ~~~~~~~~~~~~~pv~~~vFDlL~l~G-~l~~~pl~eRr~~L~~~~~~~-------------~~---------i~~~~~~ 377 (558)
T 3gde_A 321 RRKHDVAKMVEKIPLEAHFFDILYHDG-ECIDLPLRERRKLLESAVNES-------------EK---------IKLAKQI 377 (558)
T ss_dssp HC--CTHHHHHHSCEEEEEEEEEEESS-BCTTSBHHHHHHHHHHHBCCC-------------SS---------EEECCEE
T ss_pred ccccchhhHhhcCCeEEEEEEEEeeCC-CccCCCHHHHHHHHHHhcCCC-------------Ce---------EEEeeeE
Confidence 0 1247899999999999 999999999999999976321 11 3344444
Q ss_pred ech---hHHHHHHHhcccccCCCceEEEEeCCCCCccC-CCCCeEEEecCCCceEEEEE
Q 006606 466 LLS---TVNKLLKEFIPKLSHDADGLVFQGWDDPYVPR-THEGLLKWKYARMNSVDFLF 520 (639)
Q Consensus 466 ~~~---~~~~l~~~~~~~l~h~~DGLIf~p~~spY~~G-~~~~llKWKp~~~nTvDF~l 520 (639)
... .+..+|+. ...++.||||+|..++||.+| |+..|+||||. ..|+||.|
T Consensus 378 ~~~~~~~~~~~~~~---~~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~-~~t~D~vV 432 (558)
T 3gde_A 378 VTDSVDEVRKMYDE---AISAGHEGVMIKLPSSPYIPGKRGKNWLKVKAI-METLDLVV 432 (558)
T ss_dssp EESCHHHHHHHHHH---HHHTTCCEEEEECTTCBCCTTCEEEEEEEEESS-CCCEEEEE
T ss_pred ecCCHHHHHHHHHH---HHHcCCceeEEecCCCCCCCCCcCCceEEEecc-cceEEEEE
Confidence 443 34455554 567899999999999999999 57899999975 78999998
No 12
>1fvi_A Chlorella virus DNA ligase-adenylate; adenylated DNA ligase; HET: AMP; 2.00A {Chlorella virus} SCOP: b.40.4.6 d.142.2.1 PDB: 2q2t_A* 2q2u_A* 1p8l_A*
Probab=99.87 E-value=4.7e-22 Score=207.50 Aligned_cols=158 Identities=17% Similarity=0.133 Sum_probs=110.3
Q ss_pred ccceeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCcCCcccccccCCCCeEeeEEEEEecCC----------C
Q 006606 325 QRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLP----------D 394 (639)
Q Consensus 325 ~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~----------~ 394 (639)
..+|++++|+||+|+++ ++ +|++|++..+ + .|+... .+. ... +++||||||+.... .
T Consensus 18 ~~~~~~E~K~DG~R~~~----~g-~l~SR~g~~~--t--~p~l~~--~~~-~~~-~~iLDGElv~~~~~F~~l~~~~~~~ 84 (297)
T 1fvi_A 18 QFPCLATPKIAGIRSVK----QT-QMLSRTFKPI--R--NSVMNR--LLT-ELL-PEGSDGEISIEGATFQDTTSAVMTG 84 (297)
T ss_dssp CSSEEEEECCCSEEEEE----SS-SEECTTSCBC--S--CHHHHH--HHH-HHS-CTTEEEEEECTTSCHHHHHHHHHSC
T ss_pred CCcEEEEeeEeeeeEEe----cC-EEECCCCccc--C--cHHHHH--HHH-hcC-CeeEEEEEEECCCCHHHHHHHhccC
Confidence 46899999999999987 44 9999999833 2 253211 111 113 89999999983210 0
Q ss_pred C--CCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecc--eeec---
Q 006606 395 S--RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKD--FWLL--- 467 (639)
Q Consensus 395 ~--~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~--~~~~--- 467 (639)
. ...+++|++||||++| +..||.+|++.|++.+..... +. .... |...+ .+..
T Consensus 85 ~~~~~~~~~~~vFDll~l~----~~~pl~eRr~~L~~~~~~~~~-----------~~---~~~~--i~~~~~~~~~~~~~ 144 (297)
T 1fvi_A 85 HKMYNAKFSYYWFDYVTDD----PLKKYIDRVEDMKNYITVHPH-----------IL---EHAQ--VKIIPLIPVEINNI 144 (297)
T ss_dssp C----CCEEEEEEEECSSC----TTSCHHHHHHHHHHHHHHCGG-----------GG---GCSS--EEEEECCCEEECSH
T ss_pred CCCCccceEEEEEeccCCC----CCCCHHHHHHHHHHHHhhcCC-----------cc---ccce--EEEcCcceEecCCH
Confidence 0 1246899999999987 899999999999997642110 00 0001 33333 3333
Q ss_pred hhHHHHHHHhcccccCCCceEEEEeCCCCCccCCCC----CeEEEecCCCceEEEEE
Q 006606 468 STVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHE----GLLKWKYARMNSVDFLF 520 (639)
Q Consensus 468 ~~~~~l~~~~~~~l~h~~DGLIf~p~~spY~~G~~~----~llKWKp~~~nTvDF~l 520 (639)
..+..+++. .+.++.||||+|+.++||.+||+. .|+||||. .|+|+.|
T Consensus 145 ~~~~~~~~~---~~~~g~EGlv~K~~ds~Y~~GRs~~~~g~wlK~K~~--~~~d~vV 196 (297)
T 1fvi_A 145 TELLQYERD---VLSKGFEGVMIRKPDGKYKFGRSTLKEGILLKMKQF--KDAEATI 196 (297)
T ss_dssp HHHHHHHHH---HHHTTCCSEEEECTTCCCCSSBCCTTTTSSEEECCC--EEEEEEE
T ss_pred HHHHHHHHH---HHHCCCcEEEEECCCCCcCCCCCCCCCCCeEEECCC--CCEEEEE
Confidence 344455554 578999999999999999999988 99999986 5899987
No 13
>3l2p_A DNA ligase 3; DNA ligase, DNA repair, ATP-binding, cell cycle, cell divisi damage; HET: DNA AMP; 3.00A {Homo sapiens}
Probab=99.85 E-value=5.5e-20 Score=207.34 Aligned_cols=165 Identities=18% Similarity=0.309 Sum_probs=120.7
Q ss_pred cceeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCcCC-ccc-ccc--cCCCCeEeeEEEEEecC-CCCC----
Q 006606 326 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNS-NEG-LGE--KTHHFTLLDGEMIIDKL-PDSR---- 396 (639)
Q Consensus 326 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~-~~~-~~~--~~~~~tlLDGElV~d~~-~~~~---- 396 (639)
.+|++++|+||+|++++..++.+.+++|++..+ ||.... ... +.. .....+|||||||.... .+..
T Consensus 247 ~~~~~E~K~DG~R~qih~~g~~v~l~SR~g~~~-----~p~~~~~l~~~l~~~~~~~~~~iLDGElv~~d~~~g~~~~F~ 321 (579)
T 3l2p_A 247 NGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPV-----LPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFG 321 (579)
T ss_dssp TCEEEEECCCSEEEEEEEETTEEEEECTTSCBC-----CGGGTTTGGGTHHHHSTTCSEEEEEEEEEEBCTTTCCBCCGG
T ss_pred CCeEEEEccCcEEEEEEEECCEEEEECCCCCcc-----ChhHHHHHHHHHHHhcCcCCceEEEeEEEEEeCCCCcccCHH
Confidence 579999999999999999999999999998732 443211 100 000 11356999999998432 1111
Q ss_pred -----------CceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEeccee
Q 006606 397 -----------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFW 465 (639)
Q Consensus 397 -----------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~ 465 (639)
..++.|++||+|++||++++++||.+|+++|++.+.. .. + . +...++.
T Consensus 322 ~L~~~~~~~~~~~~v~~~vFDlL~l~G~~L~~~Pl~eRr~~L~~~~~~-~~-----------~-------~--i~~~~~~ 380 (579)
T 3l2p_A 322 TLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVE-IP-----------N-------R--IMFSEMK 380 (579)
T ss_dssp GGSHHHHHHCSSCCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHCCC-BT-----------T-------T--EEECCEE
T ss_pred HHHHHhhhhcccCCeEEEEEEeeccCCCccccCCHHHHHHHHHHHhhc-CC-----------C-------e--EEEeeeE
Confidence 1267999999999999999999999999999997632 10 0 1 3333332
Q ss_pred ec---hhHHHHHHHhcccccCCCceEEEEeCCCCCccCCCCCeEEEecCCC------ceEEEEE
Q 006606 466 LL---STVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARM------NSVDFLF 520 (639)
Q Consensus 466 ~~---~~~~~l~~~~~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKp~~~------nTvDF~l 520 (639)
.+ ..+..+|+. ...++.||||+|..++||.+|+. .|+|||+... .|+|+.|
T Consensus 381 ~~~~~~~~~~~~~~---a~~~g~EGlv~K~~ds~Y~~Grr-~WlK~K~~y~~~g~~~~t~D~vV 440 (579)
T 3l2p_A 381 RVTKALDLADMITR---VIQEGLEGLVLKDVKGTYEPGKR-HWLKVKKDYLNEGAMADTADLVV 440 (579)
T ss_dssp EECSHHHHHHHHHH---HHHTTCCCEEEEESSCCCCTTCE-EEEEECTTTCC---CCEEEEEEE
T ss_pred EcCCHHHHHHHHHH---HHHhCCCceEEecCcCCCCCCCe-eeEEEechhhccccccccccEEE
Confidence 22 344555654 46789999999999999999997 8999999754 6999987
No 14
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=99.84 E-value=1.4e-20 Score=181.66 Aligned_cols=132 Identities=20% Similarity=0.352 Sum_probs=109.6
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+.+.+. ....|++|+++|+.|. ..++ +...+..+.+||++....+++|+|||++|+||||++
T Consensus 32 ~gI~~Vi~l~~e~p~~~---~~~~~i~~~~ipi~D~-~~~~---l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 104 (177)
T 2oud_A 32 LNIGYVINVTTHLPLYH---YEKGLFNYKRLPATDS-NKQN---LRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATI 104 (177)
T ss_dssp TTEEEEEECCSSSCCTT---TTTTCSEEEECCCCCC-SSCC---CHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCccc---ccCCCceEEEEECCCC-Cccc---HHHHHHHHHHHHHHHHhcCCcEEEEcCCCCCchHHH
Confidence 57999999997644332 3457999999999985 2332 233455667888876667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCCCCCCCCCCCcccc
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKR 277 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~~~~~~p~~P~W~~ 277 (639)
++||||...||++++|+++++++||.+.+|.+|+.||..|+..+..+..+....|.|..
T Consensus 105 v~ayLm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l~~~~~~~~~~p~~~~ 163 (177)
T 2oud_A 105 VIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRILTPKLMG 163 (177)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHTSSCCCCCTTSCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhcCCCCcccCcchhH
Confidence 99999999999999999999999999999999999999999987766666777888875
No 15
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=99.83 E-value=5.2e-20 Score=173.09 Aligned_cols=122 Identities=22% Similarity=0.367 Sum_probs=103.1
Q ss_pred CCceEEEEcCCCCCCC----CcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCCh
Q 006606 139 RKLGLVIDLTNTTRYY----PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNR 214 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y----~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~R 214 (639)
.+|++||||+.+.... +++.+...||+|+++|+.|....|..+.+..++ +||++....+++|+|||.+|+||
T Consensus 27 ~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~~~~~~~~~~~~~~----~~i~~~~~~~~~vlVHC~~G~~R 102 (157)
T 3rgo_A 27 ENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGV----QFALKYQALGQCVYVHCKAGRSR 102 (157)
T ss_dssp SCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTTTSSCCHHHHHHHH----HHHHHHHHTTCEEEEESSSSSSH
T ss_pred cCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCCCCCChHHHHHHHH----HHHHHHHHCCCEEEEECCCCCCh
Confidence 5799999999765332 355677789999999999864577766665554 55555555788999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCC
Q 006606 215 TGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (639)
Q Consensus 215 TG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (639)
||+++++|||...||++++|++.++++||.+.++++|+++|..|+..+..
T Consensus 103 sg~~~~a~l~~~~~~~~~~a~~~v~~~R~~~~~~~~~~~~L~~~~~~l~~ 152 (157)
T 3rgo_A 103 SATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKEITA 152 (157)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999887654
No 16
>1a0i_A DNA ligase; DNA replication; HET: DNA ATP; 2.60A {Enterobacteria phage T7} SCOP: b.40.4.6 d.142.2.1
Probab=99.83 E-value=1.2e-20 Score=201.15 Aligned_cols=183 Identities=15% Similarity=0.125 Sum_probs=126.1
Q ss_pred cccccchhhhhh-hcc-cceeeeecCceeEEEEEEE-CCEEEEEeCCCccc-cc---cCcCCCcCCcccccc---cCCCC
Q 006606 311 HPVSLNSDNLQL-LRQ-RYYYATWKADGTRYMMLIT-IDGCYLIDRCFNFR-RV---QMRFPCRNSNEGLGE---KTHHF 380 (639)
Q Consensus 311 qPVsl~r~~l~~-l~~-~~Y~V~eK~DG~R~ll~i~-~~~vyLidR~~~~~-~v---~~~FP~~~~~~~~~~---~~~~~ 380 (639)
+||+.--..+.. +.. ..|++++|+||+|+++++. ++.++|++|+++-+ .+ +-.||.... .+.. ....+
T Consensus 9 ~pv~pmL~~~~~~l~~~~~~~~E~K~DG~R~~~~~~~~g~v~l~SR~g~~~~~l~~~~~~~p~~~~--~l~~~~~~~~~~ 86 (348)
T 1a0i_A 9 KAVSFVESAIKKALDNAGYLIAEIKYDGVRGNICVDNTANSYWLSRVSKTIPALEHLNGFDVRWKR--LLNDDRCFYKDG 86 (348)
T ss_dssp EEEECCHHHHHHHHHHHSSEEEEECCCSEEEEEEEETTSEEEEECTTSCBCGGGGGGCEECHHHHH--HHHSTTCCCTTE
T ss_pred CcCchhhhcHHHHHhhcCcEEEEEeeceeEEEEEEeCCCeEEEEcCCCCCCcchhhhhcccchHHH--HHhhhhccCCCC
Confidence 466433345543 333 3566666999999999998 57799999998721 11 113332211 0100 12348
Q ss_pred eEeeEEEEEecCCC----------------------------C---------CCceeEEEEeEeeecC----Ceec---c
Q 006606 381 TLLDGEMIIDKLPD----------------------------S---------RRQERRYLIYDMMAIN----QASV---I 416 (639)
Q Consensus 381 tlLDGElV~d~~~~----------------------------~---------~~~~~~yliFDiL~~~----G~~l---~ 416 (639)
++||||||+...+- . ...+++|++||||++| |+++ +
T Consensus 87 ~iLDGElv~~~~~F~~l~~~~~~k~~~~k~v~~~~~~~r~~~~~~~~i~~~~~~~~~~~~vFDll~l~~~~~G~~l~~~~ 166 (348)
T 1a0i_A 87 FMLDGELMVKGVDFNTGSGLLRTKWTDTKNQEFHEELFVEPIRKKDKVPFKLHTGHLHIKLYAILPLHIVESGEDCDVMT 166 (348)
T ss_dssp EEEEEEEEESSSCTTTHHHHHHCCSCCSSBSSCC--------CCCSCCCCCBCTTTEEEEEEEEEEHHHHHHCCCEEEEH
T ss_pred EEEEEEEEEeCCCHHHHHHHhcccccccccccccccccccccccccccccccccCcEEEEEEeeEeeCCCCCCccchhhc
Confidence 99999999853210 0 0134789999999999 9999 8
Q ss_pred CCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecceeechh---HHHHHHHhcccccCCCceEEEEeC
Q 006606 417 ERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLST---VNKLLKEFIPKLSHDADGLVFQGW 493 (639)
Q Consensus 417 ~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~~~~~---~~~l~~~~~~~l~h~~DGLIf~p~ 493 (639)
.+||.+|+++|++.+.. . .+ -.++..+++..++ +..+|+ ....++.||||+|..
T Consensus 167 ~~pl~eRr~~L~~l~~~-~----------~~---------~~i~~~~~~~~~~~~~~~~~~~---~~~~~g~EGlv~K~~ 223 (348)
T 1a0i_A 167 LLMQEHVKNMLPLLQEY-F----------PE---------IEWQAAESYEVYDMVELQQLYE---QKRAEGHEGLIVKDP 223 (348)
T ss_dssp HHHHHHHHHHHHHHHHH-C----------TT---------SEEEECCEEEESSHHHHHHHHH---HHHTTTCCCEEEECT
T ss_pred cCCHHHHHHHHHHHhhh-C----------CC---------CeEEEeccEecCCHHHHHHHHH---HHHHcCCceEEEeCC
Confidence 99999999999986531 0 00 1255666666543 445555 457899999999999
Q ss_pred CCCCccCCCCCeEEEecCCCceEEEEE
Q 006606 494 DDPYVPRTHEGLLKWKYARMNSVDFLF 520 (639)
Q Consensus 494 ~spY~~G~~~~llKWKp~~~nTvDF~l 520 (639)
++||.+|++..|+||||.. |+||.|
T Consensus 224 ds~Y~~Grr~~wlK~K~~~--~~D~vV 248 (348)
T 1a0i_A 224 MCIYKRGKKSGWWKMKPEN--EADGII 248 (348)
T ss_dssp TCEECSEEEEEEEEESCCE--EEEEEE
T ss_pred CCCCCCCCccCcEEEeecc--cEEEEE
Confidence 9999999876799999876 999998
No 17
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=99.83 E-value=2.9e-20 Score=176.88 Aligned_cols=117 Identities=15% Similarity=0.210 Sum_probs=98.2
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++|||++.+.+. .+ ..|++|+++|+.|. |. ..+..++..+.+||+++...++.|+|||.+|+||||++
T Consensus 34 ~gIt~Vlnl~~~~~~----~~-~~~~~~~~ipi~D~---~~-~~l~~~~~~~~~fI~~~~~~~~~VlVHC~~G~sRS~~v 104 (161)
T 3emu_A 34 NNISSILLVGIEVPS----LF-KDQCDILRLDIVSE---EG-HQLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAI 104 (161)
T ss_dssp TTEEEEEEEC------------CTTSEEEEECCCCS---ST-THHHHHHHHHHHHHHHHHHTTCEEEEEESSSSSHHHHH
T ss_pred CCCCEEEEeCCCCcc----cc-CCCCEEEEEeCcCC---CC-CcHHHHHHHHHHHHHHHHhcCCeEEEEcCCCCcHHHHH
Confidence 579999999965432 22 34899999999874 33 34666778888999987778899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCC
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (639)
++||||...||++++|+++++++||.+.+|.+|+.||.+|+..+..
T Consensus 105 v~ayLm~~~~~s~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~~L~~ 150 (161)
T 3emu_A 105 VIAFLMYYQRLSFINAFNKVQGLYPLIDIESGFILQLKLFEKKLEK 150 (161)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999998887543
No 18
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=99.82 E-value=1.9e-20 Score=174.24 Aligned_cols=115 Identities=13% Similarity=0.239 Sum_probs=96.0
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+.+.+ + ..|++|+++|+.|. ..++ +...+..+.+||++....+++|+|||.+|+||||++
T Consensus 28 ~gI~~Vi~l~~~~~~~----~-~~~~~~~~ip~~D~-~~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~ 98 (144)
T 3ezz_A 28 LGITALLNVSSDCPNH----F-EGHYQYKCIPVEDN-HKAD---ISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATI 98 (144)
T ss_dssp TTCCEEEECSSSCCCT----T-TTTSEEEECCCCSS-SSCC---TTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHH
T ss_pred CCCeEEEEccCCCCcc----C-CCCceEEEEEcccC-CCCC---hHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHH
Confidence 5799999999765332 2 25899999999986 3333 223445566777776677899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhc
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (639)
++||||...||++++|++.++++||.+.+|.+|++||.+|+..+
T Consensus 99 ~~aylm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l 142 (144)
T 3ezz_A 99 CLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQV 142 (144)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHTTCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCccCCCHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988764
No 19
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=99.82 E-value=1.9e-20 Score=174.40 Aligned_cols=114 Identities=18% Similarity=0.284 Sum_probs=96.2
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+.+.+. ..|++|+++|+.|.. .++ +...+..+.+||+++...|++|+|||.+|+||||++
T Consensus 28 ~gI~~Vl~l~~~~~~~~-----~~~~~~~~ipi~D~~-~~~---~~~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~ 98 (144)
T 3s4e_A 28 NKVTHILNVAYGVENAF-----LSDFTYKSISILDLP-ETN---ILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAI 98 (144)
T ss_dssp TTCCEEEECSSSCCCCC-----TTTSEEEECCCCCCT-TSC---GGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred cCCCEEEEccCCCCCCC-----CCCCEEEEEeccCCC-CCc---hHHHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHH
Confidence 57999999987543322 248999999999852 222 334556677888877778999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhh
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE 261 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~ 261 (639)
++||||...||++++|++.++++||.+.+|.+|+.||.+|+..
T Consensus 99 v~ayLm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~ 141 (144)
T 3s4e_A 99 VIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQLRTYQEG 141 (144)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHSTTCCCCHHHHHHHHHTTHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999988764
No 20
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=99.82 E-value=7e-20 Score=173.69 Aligned_cols=139 Identities=19% Similarity=0.251 Sum_probs=115.9
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHH
Q 006606 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNA 181 (639)
Q Consensus 102 ~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~ 181 (639)
.+||++..|+..+..+ .++.+. ..+|+.||+|+.. .|+++.++..||+|+++|+.|. .+|+.+
T Consensus 23 ~~~i~tq~P~~~t~~~------------~~~~l~--~~gi~~Iv~l~~~--~~~~~~~~~~~i~~~~~p~~d~-~~p~~~ 85 (167)
T 3s4o_A 23 FHFLILDAPSPSNLPT------------YIKELQ--HRGVRHLVRVCGP--TYDATLVKSRGIDVHSWPFDDG-APPTRA 85 (167)
T ss_dssp EEEEEECCCCGGGHHH------------HHHHHH--TTTEEEEEECSCC--CSCTHHHHTTTCEEEECCCCTT-CCCCHH
T ss_pred ceEEEeCCCchhhHHH------------HHHHHH--HCCCCEEEECCCC--CCCHHHHHHCCCeEEEeccCCC-CCCCHH
Confidence 3799999998876543 333333 3589999999964 6788888889999999999986 788888
Q ss_pred HHHHHHHHHHHHHHhcc----cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 182 SVNNFVYEVTQFLSRQK----HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 182 ~i~~f~~~v~~fi~~~~----~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
.+..|++.+.+.+.... .++++|+|||++|+||||+++|+|||...|+++++|++.+++.||.++. ..|...|++
T Consensus 86 ~~~~~~~~i~~~~~~~~~~~~~~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~~~~a~~~vr~~R~~~v~-~~Q~~fl~~ 164 (167)
T 3s4o_A 86 VLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGRAPILVALALVEYGNVSALDAIALIREKRKGAIN-QTQMHWITK 164 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCCCEEEEECSSSSSHHHHHHHHHHHHTTCCCHHHHHHHHHHHSTTCSC-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccccCCCcEEEECCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCC-HHHHHHHHh
Confidence 88888887777665422 3478999999999999999999999998899999999999999999986 888888866
Q ss_pred H
Q 006606 258 F 258 (639)
Q Consensus 258 ~ 258 (639)
|
T Consensus 165 ~ 165 (167)
T 3s4o_A 165 Y 165 (167)
T ss_dssp C
T ss_pred h
Confidence 4
No 21
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=99.82 E-value=1.5e-19 Score=192.37 Aligned_cols=147 Identities=22% Similarity=0.313 Sum_probs=119.2
Q ss_pred ccCceeecCCCCccccccCCCCCCC-CCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCC
Q 006606 100 IGGCIIPSKVPLSEFFNDCIPPGKR-YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVP 178 (639)
Q Consensus 100 I~~~fip~K~Pl~~~~~~~i~~~~~-~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P 178 (639)
+++.|++|+.|..... ++.+.+ +++.+.++.++. .+|++||||+ .+.|+++.+...||+|+++|+.|+ ..|
T Consensus 182 ~p~~~i~~~~P~~~~~---~~~~~~~~~~~~~~~~L~~--~GI~~VInL~--~~~y~~~~~~~~gi~~~~ipi~D~-~~P 253 (348)
T 1ohe_A 182 IPDRFIAFCGPHSRAR---LESGYHQHSPETYIQYFKN--HNVTTIIRLN--KRMYDAKRFTDAGFDHHDLFFADG-STP 253 (348)
T ss_dssp ETTTEEEECCCCSSCB---CSTTCCBCCTHHHHHHHHH--TTEEEEEECS--CCSSCTHHHHTTTCEEEECCCCTT-CCC
T ss_pred eCCeEEEECCCccccc---cccccccCCHHHHHHHHHH--cCCCEEEECC--CCcCChhhhhcCCcEEEEecCCCC-CCC
Confidence 4578999999977632 222333 457777777765 4699999999 446888889889999999999985 688
Q ss_pred CHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccC--CHHHHHHHH
Q 006606 179 DNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIY--KNEYIEALY 256 (639)
Q Consensus 179 ~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~--~~~~l~~L~ 256 (639)
+.+.+..|++.+ ...+++|+|||++|+||||+++|||||...||++++|++.++++||+++. +++|+.+|.
T Consensus 254 ~~~~~~~fi~~~-------~~~~~~VLVHC~aG~gRTGtvvaayLm~~~g~s~~eAl~~vr~~Rp~~i~~pnq~Fl~qL~ 326 (348)
T 1ohe_A 254 TDAIVKEFLDIC-------ENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFLVMKQ 326 (348)
T ss_dssp CHHHHHHHHHHH-------HSCSSEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCSCTHHHHHHHHHH
T ss_pred CHHHHHHHHHHH-------HhCCCcEEEECCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCccCHHHHHHHHHH
Confidence 877766665443 45689999999999999999999999998999999999999999998665 779999998
Q ss_pred HHHhh
Q 006606 257 TFYHE 261 (639)
Q Consensus 257 ~~y~~ 261 (639)
.+.+.
T Consensus 327 ~~~w~ 331 (348)
T 1ohe_A 327 TNLWL 331 (348)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 22
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=99.82 E-value=6.5e-20 Score=173.20 Aligned_cols=118 Identities=17% Similarity=0.234 Sum_probs=100.0
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCC-cEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEG-IKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGY 217 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~g-I~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~ 217 (639)
.+|+.||||+.+.+ ..+...| |+|+++|+.|. ..| .+..++..+.+||++....+++|+|||.+|+||||+
T Consensus 30 ~gI~~Vi~l~~~~~----~~~~~~~~i~~~~ipi~D~-~~~---~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~ 101 (155)
T 2hxp_A 30 LGIRYILNVTPNLP----NFFEKNGDFHYKQIPISDH-WSQ---NLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVT 101 (155)
T ss_dssp TTEEEEEECSSSCC----CTTTTCTTCEEEECCCCGG-GGG---GHHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHH
T ss_pred CCCCEEEEeCCCCc----ccccCCCCeEEEEEECccC-CCC---CHHHHHHHHHHHHHHHHHcCCcEEEECCCCCchhHH
Confidence 57999999997542 3455555 99999999884 333 344556777899988777889999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCC
Q 006606 218 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (639)
Q Consensus 218 li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (639)
+++||||...||++++|+++++++||.+.+|.+|+.||.+|+..+..
T Consensus 102 vv~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~~~~ 148 (155)
T 2hxp_A 102 VTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFERSLRE 148 (155)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHCSCCCCCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999987654
No 23
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=99.82 E-value=3.5e-20 Score=172.73 Aligned_cols=116 Identities=15% Similarity=0.240 Sum_probs=97.6
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+.+.+ + ..|++|+++|+.|. ..++ +..++..+.+||++....|++|+|||.+|+||||++
T Consensus 28 ~gi~~Vi~l~~~~~~~----~-~~~~~~~~ipi~D~-~~~~---l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~ 98 (145)
T 2nt2_A 28 RGVRYILNVTREIDNF----F-PGVFEYHNIRVYDE-EATD---LLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSAST 98 (145)
T ss_dssp TTEEEEEECCSSSCCS----C-BTTBEEEECCCCSS-TTCC---CGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCCEEEEeCCCCccC----C-CCCcEEEEEEEeCC-CCCc---HHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHH
Confidence 5799999999765332 2 35899999999885 2222 334556677888877778899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcC
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (639)
++||||...||++++|+++++++||.+.+|.+|+.||.+|+..+.
T Consensus 99 v~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~ 143 (145)
T 2nt2_A 99 VIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQGILL 143 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999987654
No 24
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=99.82 E-value=7.7e-20 Score=171.09 Aligned_cols=119 Identities=19% Similarity=0.361 Sum_probs=98.9
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+.+.+. ....|++|+++|+.|. ..++ +...+..+.+||++....+++|+|||++|+||||++
T Consensus 28 ~gi~~Vi~l~~e~p~~~---~~~~~~~~~~ipi~D~-~~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RSg~~ 100 (149)
T 1zzw_A 28 LNIGYVINVTTHLPLYH---YEKGLFNYKRLPATDS-NKQN---LRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATI 100 (149)
T ss_dssp TTEEEEEECCSSSCCTT---GGGTCSEEEECCCCCS-SSCC---CHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCCcc---cCCCCeEEEEEECCCC-Cccc---HHHHHHHHHHHHHHHHHcCCeEEEECCCCCCHHHHH
Confidence 57999999987644332 3457999999999985 3333 223345566788776667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCC
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (639)
++||||...||++++|++.++++||.+.+|.+|+++|.+|+..+..
T Consensus 101 ~~ayl~~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~e~~l~~ 146 (149)
T 1zzw_A 101 VIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNN 146 (149)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999987654
No 25
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=99.81 E-value=3e-19 Score=167.93 Aligned_cols=153 Identities=18% Similarity=0.265 Sum_probs=117.0
Q ss_pred CccCCCCCC-cc-cCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcEEE
Q 006606 90 WLDCPPFGQ-EI-GGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHV 167 (639)
Q Consensus 90 W~~~~~~g~-~I-~~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~ 167 (639)
|.+.|.... ++ ..+||.+..|+..+. .+..+.+.. .+|+.||+|+. ..|++..+...|++|+
T Consensus 2 ~~~~p~~~~~~~~~~~~i~s~~p~~~t~------------~df~~~l~~--~gi~~Iv~l~~--~~~~~~~~~~~~~~~~ 65 (159)
T 1rxd_A 2 RMNRPAPVEVTYKNMRFLITHNPTNATL------------NKFIEELKK--YGVTTIVRVCE--ATYDTTLVEKEGIHVL 65 (159)
T ss_dssp ------CEEEEETTEEEEECCCCCGGGH------------HHHHHHHHH--TTEEEEEECSC--CCSCCHHHHHTTCEEE
T ss_pred CCCCCCcccccCCCceEEEeCCCccccH------------HHHHHHHHH--cCCCEEEEcCC--CccCHHHHHHcCCEEE
Confidence 666654332 23 358999999876533 343444433 57999999985 3577777888899999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccC
Q 006606 168 KIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIY 247 (639)
Q Consensus 168 ~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~ 247 (639)
++|+.|. .+|+.+.+..+++.+.+++. ..++++|+|||++|+||||+++|+|||. .|+++++|++.+++.||.++
T Consensus 66 ~~p~~d~-~~~~~~~~~~~~~~i~~~~~--~~~~~~vlVHC~aG~~Rtg~~~a~~l~~-~~~~~~~a~~~vr~~R~~~~- 140 (159)
T 1rxd_A 66 DWPFDDG-APPSNQIVDDWLSLVKIKFR--EEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKRRGAF- 140 (159)
T ss_dssp ECCC--C-CCCCHHHHHHHHHHHHHHHH--HSTTCEEEEECSSSSTTHHHHHHHHHHH-TTCCHHHHHHHHHTTCTTCC-
T ss_pred eCCCcCC-CCCCHHHHHHHHHHHHHHHH--hCCCCeEEEECCCCCCHHHHHHHHHHHH-hCCCHHHHHHHHHHHCCCCC-
Confidence 9998774 77888888888888887776 3457899999999999999999999997 69999999999999999998
Q ss_pred CHHHHHHHHHHHhhcC
Q 006606 248 KNEYIEALYTFYHEKR 263 (639)
Q Consensus 248 ~~~~l~~L~~~y~~~~ 263 (639)
+..|..+|++|+...+
T Consensus 141 ~~~q~~~l~~~~~~~r 156 (159)
T 1rxd_A 141 NSKQLLYLEKYRPKMR 156 (159)
T ss_dssp CHHHHHHHHHCCCCCC
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8999999988877543
No 26
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=99.81 E-value=2.4e-19 Score=174.87 Aligned_cols=143 Identities=19% Similarity=0.288 Sum_probs=119.6
Q ss_pred cCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCH
Q 006606 101 GGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDN 180 (639)
Q Consensus 101 ~~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~ 180 (639)
+.+||++..|+... ..+.++.+. ..+|+.||||+. ..|+++.+...||+|+.+|+.|. .+|+.
T Consensus 36 ~~r~I~tq~P~~~t------------~~~~~~~L~--~~gi~~Iv~l~~--~~~~~~~~~~~~i~~~~~pi~d~-~~~~~ 98 (189)
T 3rz2_A 36 NMRFLITHNPTNAT------------LNKFIEELK--KYGVTTIVRVCE--ATYDTTLVEKEGIHVLDWPFDDG-APPSN 98 (189)
T ss_dssp TEEEEEECCCCTTT------------HHHHHHHHH--TTTEEEEEECSC--CCSCCHHHHHSSCEEEECCCCSS-SCCCS
T ss_pred CCeEEEeCCCCccc------------HHHHHHHHH--HcCCcEEEEeCC--CcCCHHHHHHcCcEEEEecCCCC-CCCCH
Confidence 46899999997743 334445444 357999999994 45788888889999999998884 78888
Q ss_pred HHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHh
Q 006606 181 ASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYH 260 (639)
Q Consensus 181 ~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~ 260 (639)
+.+..|++.+.+.+. ..++++|+|||.+|+||||+++|+|||. .||++++|++.++++||.++ +..|+.+|.+|+.
T Consensus 99 ~~~~~~~~~i~~~~~--~~~~~~VlVHC~aG~gRSg~~va~~L~~-~g~~~~~a~~~vr~~R~~~v-~~~Q~~~l~~~~~ 174 (189)
T 3rz2_A 99 QIVDDWLSLVKIKFR--EEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKRRGAF-NSKQLLYLEKYRP 174 (189)
T ss_dssp HHHHHHHHHHHHHHH--HSTTCEEEEECSSSSTTHHHHHHHHHHT-TTCCHHHHHHHHHTTSSSCC-CHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHH--hCCCCcEEEECCCCCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHCcCCC-CHHHHHHHHHHHH
Confidence 889999888877664 3578899999999999999999999995 79999999999999999988 7899999988877
Q ss_pred hcCC
Q 006606 261 EKRL 264 (639)
Q Consensus 261 ~~~~ 264 (639)
.+..
T Consensus 175 ~lrl 178 (189)
T 3rz2_A 175 KMRL 178 (189)
T ss_dssp CCCC
T ss_pred Hhcc
Confidence 6554
No 27
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=99.80 E-value=1.1e-19 Score=170.18 Aligned_cols=120 Identities=19% Similarity=0.329 Sum_probs=97.9
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhccc-CCCeEEEEcCCCCChhHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKH-SKKYILVHCTHGHNRTGY 217 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~-~~~~VlVHC~~G~~RTG~ 217 (639)
.+|++||||+.+.....++.++..|++|+++|+.|. |..+ +...+..+.+||++... .+++|+|||++|+||||+
T Consensus 26 ~gi~~Vi~l~~~~~~~~~~~~~~~~i~~~~ip~~d~---~~~~-l~~~~~~~~~~i~~~~~~~~~~vlVHC~aG~~RSg~ 101 (151)
T 2e0t_A 26 LGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDS---PAFD-MSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSAT 101 (151)
T ss_dssp HTCCEEEETTCCTTCCSCTTHHHHTCEEEECCCCSS---TTSC-THHHHHHHHHHHHHHHHSTTCCEEEECSSSSHHHHH
T ss_pred cCCCEEEEccCCcccCCccccCCCCeEEEEEecccC---CCcc-HHHHHHHHHHHHHHHHhcCCCcEEEECCCCCChHHH
Confidence 479999999966443345555567999999999874 2222 22344566688876655 689999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcC
Q 006606 218 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (639)
Q Consensus 218 li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (639)
+++||||...||++++|+++++++|| +.+|.+|+.||..|...+.
T Consensus 102 ~~~ayl~~~~~~~~~~a~~~v~~~R~-i~pn~~f~~qL~~~e~~l~ 146 (151)
T 2e0t_A 102 LVLAYLMLYHHLTLVEAIKKVKDHRG-IIPNRGFLRQLLALDRRLR 146 (151)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHTSC-SCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997 7899999999999887654
No 28
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=99.80 E-value=1e-19 Score=176.67 Aligned_cols=116 Identities=11% Similarity=0.167 Sum_probs=95.6
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++|||++.+...+.. .+ .|++|+++|+.|. . .+..++..+.+||+++...|+.|+|||.+|+||||++
T Consensus 64 ~gIt~Vlnv~~e~~~~~~-~~--~~i~y~~ip~~d~--~----~i~~~~~~~~~fI~~~~~~g~~VLVHC~~G~sRS~tv 134 (182)
T 2j16_A 64 LPFDVVINVAEEANDLRM-QV--PAVEYHHYRWEHD--S----QIALDLPSLTSIIHAATTKREKILIHAQCGLSRSATL 134 (182)
T ss_dssp TTCSEEEECCSCC-----------CCEEEECCCSSG--G----GGGGGHHHHHHHHHHHHHTTCCEEEEESSCCSHHHHH
T ss_pred hCCCEEEEecCCCCCchh-cc--CCceEEEEecCCC--c----hHHHHHHHHHHHHHHHHhcCCeEEEECCCCCChHHHH
Confidence 479999999977644432 12 3899999999652 2 2444566777899887778999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcC
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (639)
++||||...||++++|+++++++||.+.+|.+|+.||.+|+..+.
T Consensus 135 v~ayLm~~~~~s~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~~L~ 179 (182)
T 2j16_A 135 IIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWEVALN 179 (182)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999988654
No 29
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=99.80 E-value=1.2e-19 Score=175.72 Aligned_cols=121 Identities=17% Similarity=0.292 Sum_probs=99.6
Q ss_pred CCceEEEEcCCCCCCC----CcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccC-CCeEEEEcCCCCC
Q 006606 139 RKLGLVIDLTNTTRYY----PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHS-KKYILVHCTHGHN 213 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y----~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~-~~~VlVHC~~G~~ 213 (639)
.+|++||||+.+.... +++.+...||+|+++|+.|. ..++ +..++..+.+||++.... +++|+|||.+|+|
T Consensus 52 ~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~~ip~~D~-~~~~---~~~~~~~~~~~i~~~~~~~~~~VlVHC~~G~~ 127 (183)
T 3f81_A 52 LGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDT-QEFN---LSAYFERAADFIDQALAQKNGRVLVHCREGYS 127 (183)
T ss_dssp HTCCEEEETTBSSSTTSBCCCTGGGTTTTCEEEECCCCCS-TTSC---GGGGHHHHHHHHHHHHHSTTCCEEEECSSSSS
T ss_pred CCCcEEEECCCCccccccccchhhcccCCCEEEEEEcCCC-Cccc---HHHHHHHHHHHHHHHHHcCCCeEEEECCCCcc
Confidence 4799999999765422 34556678999999999986 3333 234455666777766555 8999999999999
Q ss_pred hhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCC
Q 006606 214 RTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (639)
Q Consensus 214 RTG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (639)
|||++++||||...||++++|++.++++|| +.+|.+|+.||.+|...+..
T Consensus 128 RSg~~v~ayLm~~~~~~~~~A~~~v~~~R~-i~pn~~f~~qL~~~e~~L~~ 177 (183)
T 3f81_A 128 RSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQLCQLNDRLAK 177 (183)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHSC-CCCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998 89999999999998876544
No 30
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=99.80 E-value=7.3e-19 Score=163.97 Aligned_cols=116 Identities=22% Similarity=0.379 Sum_probs=98.7
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+...+. ....|++|+++|+.|. ..|+.+.+..+++.+ ++....+++|+|||.+|.||||++
T Consensus 34 ~gi~~Vi~l~~~~~~~~---~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~i----~~~~~~~~~vlVHC~~G~~Rsg~~ 105 (150)
T 4erc_A 34 LGVRHLVSLTERGPPHS---DSCPGLTLHRLRIPDF-CPPAPDQIDRFVQIV----DEANARGEAVGVHCALGFGRTGTM 105 (150)
T ss_dssp TTEEEEEECSSSCCTTG---GGCTTSEEEECCCCTT-SCCCHHHHHHHHHHH----HHHHHTTCEEEEECSSSSHHHHHH
T ss_pred CCCCEEEEcCCCCCCcc---cccCCceEEEEecCCC-CCCCHHHHHHHHHHH----HHHHHCCCCEEEECCCCCCHHHHH
Confidence 47999999997654432 2336999999999996 688877777766544 443446789999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhc
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (639)
+++|||...||++++|++.+++.||.++++.+|..+|++|+..+
T Consensus 106 ~a~~l~~~~~~~~~~a~~~vr~~R~~~~~~~~q~~~l~~~~~~l 149 (150)
T 4erc_A 106 LACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQFYQRT 149 (150)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHSTTCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998765
No 31
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=99.80 E-value=2e-19 Score=171.22 Aligned_cols=118 Identities=14% Similarity=0.239 Sum_probs=98.8
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+.+.+ ...|++|+++|+.|. ..++ +..++..+.+||++....+++|+|||++|+||||++
T Consensus 36 ~gI~~Vi~l~~~~~~~-----~~~~~~~~~ip~~D~-~~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 106 (164)
T 2hcm_A 36 AGITLCVNVSRQQPGP-----RAPGVAELRVPVFDD-PAED---LLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAV 106 (164)
T ss_dssp TTEEEEEECSSSCCCC-----CCTTCEEEECCCCSC-TTSC---CHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHHHH
T ss_pred CCCeEEEEcCCCCCCC-----CCCCCEEEEEeCcCC-CCch---HHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHH
Confidence 5799999999765432 236999999999875 2222 333455667888877677899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCCC
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLD 265 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~~ 265 (639)
++||||...||++++|++.++++||.+.++.+|+++|..|+..+...
T Consensus 107 ~~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~~~ 153 (164)
T 2hcm_A 107 CTAYLMRHRGHSLDRAFQMVKSARPVAEPNLGFWAQLQKYEQTLQAQ 153 (164)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999998876543
No 32
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=99.79 E-value=2e-18 Score=160.86 Aligned_cols=116 Identities=22% Similarity=0.399 Sum_probs=96.6
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+.. ++...++ ++.|+++|+.|+ ..|+.+.+.++++.+.+. ...+++|+|||.+|+||||++
T Consensus 35 ~gi~~Vv~l~~~~e-~~~~~~~--~~~~~~~~~~d~-~~p~~~~~~~~~~~i~~~----~~~~~~vlVHC~aG~~Rsg~~ 106 (151)
T 2img_A 35 LGVRHLVSLTERGP-PHSDSCP--GLTLHRLRIPDF-CPPAPDQIDRFVQIVDEA----NARGEAVGVHCALGFGRTGTM 106 (151)
T ss_dssp TTEEEEEECSSSCC-TTGGGCT--TSEEEECCCCTT-CCCCHHHHHHHHHHHHHH----HHTTCEEEEECSSSSSHHHHH
T ss_pred CCCCEEEECCCCCC-CCHHHHh--hCCeEEEeCCCC-CCCCHHHHHHHHHHHHHH----HhCCCcEEEECCCCCChHHHH
Confidence 57999999997654 3333443 567999999996 678776666665544443 346889999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhc
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (639)
+|+|||...||++++|++.++++||.++++++|..+|++++..+
T Consensus 107 ~~~~l~~~~~~~~~~a~~~~r~~R~~~~~~~~q~~~l~~~~~~L 150 (151)
T 2img_A 107 LACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQFYQRT 150 (151)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHSTTCSCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHh
Confidence 99999998899999999999999999999999999999998764
No 33
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=99.79 E-value=4.3e-19 Score=173.07 Aligned_cols=118 Identities=16% Similarity=0.248 Sum_probs=98.1
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+.+.. ...||+|+++|+.|. ..++ +...+..+.+||+++...+++|+|||.+|+||||++
T Consensus 44 ~gIt~Vi~l~~~~~~~-----~~~~i~~~~ipi~D~-~~~~---~~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~v 114 (188)
T 2esb_A 44 NQITMVINVSVEVVNT-----LYEDIQYMQVPVADS-PNSR---LCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAAL 114 (188)
T ss_dssp TTCCEEEECCSSCCCC-----CCTTCEEEECCCCSC-TTSC---GGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCCc-----CCCCCEEEEEeCcCC-CCcc---HHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHH
Confidence 5799999999754321 125999999999875 2222 233456667888877678999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCCC
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLD 265 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~~ 265 (639)
++||||...||++++|+++++++||.+.+|.+|+.+|.+|+..+...
T Consensus 115 v~ayLm~~~~~s~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l~~~ 161 (188)
T 2esb_A 115 CLAYLMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGK 161 (188)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHHHHHHccC
Confidence 99999999999999999999999999999999999999998876543
No 34
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=99.78 E-value=3.8e-19 Score=176.50 Aligned_cols=118 Identities=14% Similarity=0.215 Sum_probs=99.3
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+.+. .+ ..||+|+++|+.|. ..|+ +..++..+.+||++....+++|||||.+|+||||++
T Consensus 30 ~GIt~VInl~~e~~~----~~-~~gi~y~~ipi~D~-~~~~---l~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRSgtv 100 (211)
T 2g6z_A 30 LHITALLNVSRRTSE----AC-MTHLHYKWIPVEDS-HTAD---ISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTI 100 (211)
T ss_dssp HTCCEEEECSSCCCC----TT-CTTSEEEECCCCSS-TTSC---CGGGHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHH
T ss_pred CCCCEEEEcCCCCcc----cc-ccCCEEEEeeCCCC-CCCC---HHHHHHHHHHHHHHHHhcCCeEEEECCCCCCcHHHH
Confidence 479999999976432 23 36999999999985 3343 223445666888877677899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCCC
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLD 265 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~~ 265 (639)
++||||...||++++|+++++++||.+.+|.+|++||.+|+..+..+
T Consensus 101 v~AYLm~~~g~s~~eAl~~vr~~Rp~i~pN~~f~~qL~~~e~~l~~~ 147 (211)
T 2g6z_A 101 CMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQYESEILPS 147 (211)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999988764
No 35
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=99.78 E-value=4.5e-19 Score=166.64 Aligned_cols=119 Identities=13% Similarity=0.203 Sum_probs=96.2
Q ss_pred CCceEEEEcCCCCC-CCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHH
Q 006606 139 RKLGLVIDLTNTTR-YYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGY 217 (639)
Q Consensus 139 ~~I~~VIdLt~~~~-~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~ 217 (639)
.+|++||||+.+.. .+....+ ..|++|+++|+.|. ..++ +..++..+.+||++....+++|+|||++|+||||+
T Consensus 32 ~gI~~Vi~l~~~~e~~~~~~~~-~~~~~~~~ip~~d~-~~~~---l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~RS~~ 106 (154)
T 2r0b_A 32 HGITHIICIRQNIEANFIKPNF-QQLFRYLVLDIADN-PVEN---IIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAA 106 (154)
T ss_dssp TTCCEEEEEECGGGTTTSSCCC-TTTSEEEEEECCSS-TTSC---CGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHH
T ss_pred cCCeEEEEeCCccccccCCCCC-cCceeEEEEECCCC-Cccc---HHHHHHHHHHHHHHHHhcCCCEEEEcCCCCChHHH
Confidence 57999999986532 1211122 25899999999874 2222 33345667788887766789999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhc
Q 006606 218 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (639)
Q Consensus 218 li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (639)
+++||||...||++++|+++++++||.+.+|.+|+.+|.+|...+
T Consensus 107 ~~~ayl~~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~e~~l 151 (154)
T 2r0b_A 107 FVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYEAIY 151 (154)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999887754
No 36
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=99.78 E-value=1.8e-18 Score=182.97 Aligned_cols=151 Identities=17% Similarity=0.265 Sum_probs=128.9
Q ss_pred ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCC
Q 006606 100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD 179 (639)
Q Consensus 100 I~~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~ 179 (639)
|+.+||+|..|... +...+|.+.++++..+++.+.+...|+||+++ +.|+++.|. .++.++|++|+ .+|+
T Consensus 30 IT~riIam~~P~~~-----~e~~yRn~i~dv~~~L~~~h~~~y~V~NL~sE-~~Yd~~~f~---~~v~~~p~pD~-~~P~ 99 (339)
T 3v0d_A 30 VTDHVIAMSFPSSG-----RQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSE-RGYDETKFD---NHVYRVMIDDH-NVPT 99 (339)
T ss_dssp EETTEEEECCEESS-----SCCTTSEEHHHHHHHHHHHSTTCEEEEEEETT-CCCCGGGGT---TCEEEEEECTT-SCCC
T ss_pred EecCEEEEECCCCC-----chhhccCCHHHHHHHHHHhCCCceEEEECCCC-CCCChHHcC---CeEEEeccCCC-CCCC
Confidence 77899999999654 23456778999999999988889999999865 789988884 46788999997 7889
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC-CHHHHHHHHHhcCC--------CccCCHH
Q 006606 180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM-SVAQAIKKFAEVRP--------PGIYKNE 250 (639)
Q Consensus 180 ~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~-s~~eAi~~~~~~Rp--------~~i~~~~ 250 (639)
.+.+..|++.+..++. ..+++.|+|||++|.||||+++|||||....+ ++++|++.|+++|+ .++..+.
T Consensus 100 ~~~l~~~~~~v~~~l~--~~~~~~v~vHC~~G~gRtg~~ia~~Li~~~~~~~~~~Al~~~~~~R~~~~~~~~~~~v~~ps 177 (339)
T 3v0d_A 100 LVDLLKFIDDAKVWMT--SDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVFQGVETAS 177 (339)
T ss_dssp HHHHHHHHHHHHHHHH--TCTTCEEEEECSSSSHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHHSSCCTTSCCCCC-CHH
T ss_pred HHHHHHHHHHHHHHHh--cCCCCeEEEEeCCCCcchHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCccccccccccCCHH
Confidence 9999999999999997 44678999999999999999999999998777 89999999999998 4788999
Q ss_pred HHHHHHHHHhhc
Q 006606 251 YIEALYTFYHEK 262 (639)
Q Consensus 251 ~l~~L~~~y~~~ 262 (639)
|++.|..+..-+
T Consensus 178 Q~Ryv~yf~~~l 189 (339)
T 3v0d_A 178 QIRYVGYFEKIK 189 (339)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999986655543
No 37
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=99.78 E-value=7.7e-19 Score=167.46 Aligned_cols=115 Identities=17% Similarity=0.280 Sum_probs=95.4
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+... ...|++|+++|+.|. ..++ +..++..+.+||++....+++|+|||++|+||||++
T Consensus 31 ~gI~~Vi~l~~~~~~------~~~~i~~~~ip~~D~-~~~~---l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~ 100 (165)
T 1wrm_A 31 NKVTHILSVHDSARP------MLEGVKYLCIPAADS-PSQN---LTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTL 100 (165)
T ss_dssp TTEEEEEECSTTCCC------CSTTCEEEECCCCSS-TTSC---CGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCC------CCCCCeEEEEECCCC-CCcc---HHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHH
Confidence 579999999865421 135999999999874 2222 222345566788776667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcC
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (639)
++||||...||++++|++.++++||.+.+|.+|+.+|.+|+..+.
T Consensus 101 ~~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~ 145 (165)
T 1wrm_A 101 VIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEKHEV 145 (165)
T ss_dssp HHHHHHHTSSCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988653
No 38
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=99.77 E-value=3.4e-18 Score=181.85 Aligned_cols=151 Identities=15% Similarity=0.164 Sum_probs=122.4
Q ss_pred ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCC
Q 006606 100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD 179 (639)
Q Consensus 100 I~~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~ 179 (639)
|+.+||+|..|.... ...+|.+.+++++.+++.+.+...|+||+ .+.|+++.|.. +++++|++|+ .+|+
T Consensus 27 IT~riIam~~P~~~~-----e~~yrn~i~~v~~~L~~~H~~~y~V~NLs--e~~Yd~~~f~~---~V~~~~~pD~-~~P~ 95 (361)
T 3n0a_A 27 VTSRIIVMSFPLDSV-----DIGFRNQVDDIRSFLDSRHLDHYTVYNLS--PKSYRTAKFHS---RVSECSWPIR-QAPS 95 (361)
T ss_dssp SSSSEEEEEC-----------------CHHHHHHHHHHHTTCEEEEECS--SSCCGGGSCGG---GEEECCCCSS-SCCC
T ss_pred EcCCEEEEECCCCCc-----hhhhcCCHHHHHHHHHHhCCCeEEEEECC--CCCCChhhcCC---cEEEeecCCC-CCCC
Confidence 778999999997652 23456677899999998877899999997 46899888864 4778999997 7889
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC-CHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006606 180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM-SVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (639)
Q Consensus 180 ~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~-s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (639)
.+.+..|++.+.+|+. ..+++.|+|||++|.||||++||||||....+ ++++|+++|+++|+.+...+.|++.|..+
T Consensus 96 l~~l~~~~~~i~~~l~--~~~~~~v~VHC~aG~GRtg~~ia~~Li~~~~~~~~~eAl~~~~~~R~~~~~~psQ~ryv~yf 173 (361)
T 3n0a_A 96 LHNLFAVCRNMYNWLL--QNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGLSPSHRRYLGYM 173 (361)
T ss_dssp HHHHHHHHHHHHHHHH--HCTTCEEEEEECSCTHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHSTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--cCCCCeEEEEeCCCCccHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 9999999999999997 35678999999999999999999999998666 99999999999999988999999999666
Q ss_pred HhhcC
Q 006606 259 YHEKR 263 (639)
Q Consensus 259 y~~~~ 263 (639)
...+.
T Consensus 174 ~~ll~ 178 (361)
T 3n0a_A 174 CDLLA 178 (361)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 55544
No 39
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=99.77 E-value=8.3e-19 Score=175.20 Aligned_cols=121 Identities=18% Similarity=0.321 Sum_probs=97.7
Q ss_pred CCceEEEEcCCCCCCC--CcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcc-cCCCeEEEEcCCCCChh
Q 006606 139 RKLGLVIDLTNTTRYY--PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQK-HSKKYILVHCTHGHNRT 215 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y--~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~-~~~~~VlVHC~~G~~RT 215 (639)
.+|++||||+.+.... .+..+...||+|+++|+.|. ..++ +..++..+.+||++.. ..+++|||||.+|+|||
T Consensus 78 ~gIt~VInl~~~~~~~~~~~~~~~~~~i~y~~ipi~D~-~~~~---l~~~~~~~~~fI~~~l~~~~~~VLVHC~aG~sRS 153 (219)
T 2y96_A 78 AGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDL-PTFD---LSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRS 153 (219)
T ss_dssp TTCCEEEETTBSTTSBCCHHHHTTTSCCEEEECCCCSS-TTSC---GGGGHHHHHHHHHHHHTSTTCCEEEECSSSSSHH
T ss_pred CCCeEEEECCCCccccccchhhhcccCcEEEEEECCCC-Cchh---HHHHHHHHHHHHHHHHHccCCeEEEECCCCCCHH
Confidence 5799999999653211 13334567999999999874 2222 3344556678888776 57899999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCC
Q 006606 216 GYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (639)
Q Consensus 216 G~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (639)
|++++||||...||++++|+++++++|+ +.+|.+|+.||..|+..+..
T Consensus 154 ~tvv~aYLm~~~~~s~~eAl~~vr~~R~-i~pn~~f~~qL~~~e~~L~~ 201 (219)
T 2y96_A 154 ATLVLAYLMIHKDMTLVDAIQQVAKNRC-VLPNRGFLKQLRELDKQLVQ 201 (219)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHTTSC-CCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999996 78999999999998887543
No 40
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=99.77 E-value=1.4e-18 Score=164.61 Aligned_cols=114 Identities=15% Similarity=0.243 Sum_probs=94.4
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+... + ..|++|+++|+.|. ..++ +...+..+.+||++....+++|+|||++|+||||++
T Consensus 32 ~gI~~Vi~l~~~~~~-----~-~~~i~~~~ipi~D~-~~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 101 (160)
T 1yz4_A 32 NKITHIISIHESPQP-----L-LQDITYLRIPVADT-PEVP---IKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTI 101 (160)
T ss_dssp TTCCEEEEECSSCCC-----C-CTTCEEEEECCCSC-TTSC---GGGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHH
T ss_pred CCCeEEEEccCCCCC-----c-cCCCeEEEEECCCC-CCcc---HHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHH
Confidence 579999999965321 1 35999999999885 3333 222345566788766667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhc
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (639)
++||||...||++++|++.++++||.+.+|.+|++||.+|+...
T Consensus 102 ~~aylm~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~e~~~ 145 (160)
T 1yz4_A 102 VTAYVMTVTGLGWRDVLEAIKATRPIANPNPGFRQQLEEFGWAS 145 (160)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHTCTTCCCCHHHHHHHHHHHHTH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998888754
No 41
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=99.76 E-value=2.9e-18 Score=167.53 Aligned_cols=118 Identities=14% Similarity=0.181 Sum_probs=97.9
Q ss_pred CCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
.+|++||||+.+.+... ..|++|+++|+.|. ..|+. ..++..+.+||+.....+++|+|||.+|+||||++
T Consensus 50 ~gI~~Vi~l~~~~~~~~-----~~gi~y~~ipi~D~-~~~~l---~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtv 120 (190)
T 2wgp_A 50 RGITCIVNATIEIPNFN-----WPQFEYVKVPLADM-PHAPI---GLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATL 120 (190)
T ss_dssp TTCCEEEECCSSSCCCC-----CTTSEEEECCCCSS-TTSCG---GGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCCCC-----CCCCEEEEEEcccC-CCCCH---HHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHH
Confidence 57999999997543221 24899999999985 34442 23445566888776667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCCC
Q 006606 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLD 265 (639)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~~ 265 (639)
++||||...||++++|+++++++||.+.+|.+|+++|..|+..+...
T Consensus 121 v~ayLm~~~~~s~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~~~ 167 (190)
T 2wgp_A 121 CIAYLMKFHNVCLLEAYNWVKARRPVIRPNVGFWRQLIDYERQLFGK 167 (190)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999998876543
No 42
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=99.76 E-value=1.7e-18 Score=171.20 Aligned_cols=122 Identities=15% Similarity=0.236 Sum_probs=97.6
Q ss_pred CCceEEEEcCCCCCCCC--cchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhccc-CCCeEEEEcCCCCChh
Q 006606 139 RKLGLVIDLTNTTRYYP--TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKH-SKKYILVHCTHGHNRT 215 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~--~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~-~~~~VlVHC~~G~~RT 215 (639)
.+|++||||+.+....+ ...++..||+|+.+|+.|. |..+.+. .+..+.+||+++.. .+++|+|||.+|+|||
T Consensus 70 ~gIt~Vinl~~~~~~~~~~~~~~~~~~i~y~~ipi~D~---p~~dl~~-~f~~~~~fI~~~l~~~~~~VLVHC~aG~sRS 145 (205)
T 2pq5_A 70 LGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDN---PFFDLSV-YFLPVARYIRAALSVPQGRVLVHCAMGVSRS 145 (205)
T ss_dssp HTCCEEEETBCSTTSCCCHHHHTTTSSCEEEECBCCCC---TTSCGGG-GHHHHHHHHHHHHTSTTCCEEEECSSSSSHH
T ss_pred cCCeEEEEeCCCcccCCcchhhhccCCceEEeeecCCC---CcchHHH-HHHHHHHHHHHHHhcCCCeEEEECCCCCcHH
Confidence 47999999996542222 2334567999999999873 4433333 34456688887654 6889999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcCCC
Q 006606 216 GYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLD 265 (639)
Q Consensus 216 G~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~~ 265 (639)
|++++||||...||++++|++.++++|| +.+|.+|++||.+++..+...
T Consensus 146 ~tvv~aYLm~~~~~s~~~A~~~vr~~R~-i~pn~gf~~qL~~~e~~l~~~ 194 (205)
T 2pq5_A 146 ATLVLAFLMIYENMTLVEAIQTVQAHRN-ICPNSGFLRQLQVLDNRLGRE 194 (205)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHTTTSC-CCCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999998 689999999999998876553
No 43
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=99.76 E-value=1.1e-18 Score=168.07 Aligned_cols=114 Identities=22% Similarity=0.348 Sum_probs=94.7
Q ss_pred CCc--eEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhH
Q 006606 139 RKL--GLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTG 216 (639)
Q Consensus 139 ~~I--~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG 216 (639)
.+| ++||||+.+...+ ...|++|+++|+.|. ..++ +..++..+.+||++....+++|+|||.+|+||||
T Consensus 53 ~gI~~~~Ii~l~~~~~~~-----~~~~~~~~~~p~~d~-~~~~---l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg 123 (176)
T 3cm3_A 53 SEVKFKYVLNLTMDKYTL-----PNSNINIIHIPLVDD-TTTD---ISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSG 123 (176)
T ss_dssp SSSCCSEEEECSSSCCCC-----TTSCCEEEECCCCCS-SSCC---CGGGHHHHHHHHHHHHHHTCCEEEECSSSSSHHH
T ss_pred cCCCCCEEEEecCCCCCc-----CCCCCEEEEEECCCC-Cccc---HHHHHHHHHHHHHHHHHCCCcEEEECCcCCCHHH
Confidence 578 9999999765433 236999999999885 2332 2233445567777666668999999999999999
Q ss_pred HHHHHHHHHhcCCC-----HHHHHHHHHhcCCCccCCHHHHHHHHHHHhh
Q 006606 217 YMIVHFLMRSQSMS-----VAQAIKKFAEVRPPGIYKNEYIEALYTFYHE 261 (639)
Q Consensus 217 ~li~aYLm~~~g~s-----~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~ 261 (639)
++++||||...+|+ +++|++.++++||.+.++.+|++||.+|+..
T Consensus 124 ~~v~aylm~~~~~~~~~v~~~~A~~~vr~~R~~~~pn~~f~~qL~~~~~~ 173 (176)
T 3cm3_A 124 AMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFKRQIIEKYVI 173 (176)
T ss_dssp HHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCccccHHHHHHHHHHHCCCCCCCHHHHHHHHHHHhc
Confidence 99999999999999 9999999999999999999999999998763
No 44
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=99.74 E-value=2.5e-17 Score=173.91 Aligned_cols=153 Identities=20% Similarity=0.312 Sum_probs=127.3
Q ss_pred ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCC
Q 006606 100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD 179 (639)
Q Consensus 100 I~~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~ 179 (639)
|+.+|++|..|.. .++...+.+.++++..++..+.+...|+||+++ +.|+++.+ +++++++|++|+ .+|+
T Consensus 22 It~~li~~~~P~~-----~~e~l~r~~i~~Vv~~l~~~~~~~~~v~nl~~e-~~y~~~~~---~~~~~~~~~~D~-~~P~ 91 (324)
T 1d5r_A 22 IYPNIIAMGFPAE-----RLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAE-RHYDTAKF---NCRVAQYPFEDH-NPPQ 91 (324)
T ss_dssp EETTEEEECCCBS-----SCCTTCCCBHHHHHHHHHHHSSSCEEEEEEESS-CCCCTTSC---SSCEEEEEECTT-SCCC
T ss_pred EcCcEEEEeCCCC-----cchhhhccCHHHHHHHHHhcCCCcEEEEEcCCC-CCCChHHh---CCeEEEEeecCC-CCCc
Confidence 5567999999953 234456788999999988887789999999864 46776554 567999999997 6888
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC-CHHHHHHHHHhcC---CCccCCHHHHHHH
Q 006606 180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM-SVAQAIKKFAEVR---PPGIYKNEYIEAL 255 (639)
Q Consensus 180 ~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~-s~~eAi~~~~~~R---p~~i~~~~~l~~L 255 (639)
.+.+..|++.+.+++. ..++++|+|||++|+||||++||||||...++ ++++|++.++.+| |+++..+.|.+.|
T Consensus 92 ~~~l~~~~~~i~~~l~--~~~~~~VlVHC~aG~gRTGt~ia~yL~~~~~~~~~~eal~~~~~~R~~r~~~v~~~~Q~~yl 169 (324)
T 1d5r_A 92 LELIKPFCEDLDQWLS--EDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRYV 169 (324)
T ss_dssp HHHHHHHHHHHHHHHT--TTSCSEEEEECSSSSHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHCSSSCSSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--hcCCCeEEEECCCCCChhHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCCCCCCCHHHHHHH
Confidence 8999999999999987 34678999999999999999999999998885 9999999988776 5789999999999
Q ss_pred HHHHhhcCC
Q 006606 256 YTFYHEKRL 264 (639)
Q Consensus 256 ~~~y~~~~~ 264 (639)
..+...+..
T Consensus 170 ~~~~~~l~~ 178 (324)
T 1d5r_A 170 YYYSYLLKN 178 (324)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 877665443
No 45
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=99.72 E-value=3e-17 Score=162.78 Aligned_cols=128 Identities=19% Similarity=0.199 Sum_probs=101.4
Q ss_pred HHHHHHHcCCCceEEEEcCCCCC--CCC----cchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCe
Q 006606 130 VIHQLRVLGRKLGLVIDLTNTTR--YYP----TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKY 203 (639)
Q Consensus 130 l~~~~~~~~~~I~~VIdLt~~~~--~y~----~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~ 203 (639)
-++.++. .+|++||||+.+.. .|. ++.+...||+|+++|+.|+ .+|+.+.+..+++.+... ...+++
T Consensus 63 d~~~L~~--~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~-~~p~~~~~~~~~~~i~~~----~~~~~~ 135 (212)
T 1fpz_A 63 DTEELKS--CGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADG-GTPDIASCCEIMEELTTC----LKNYRK 135 (212)
T ss_dssp HHHHHHH--HTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTT-CCCCHHHHHHHHHHHHHH----HHTTCC
T ss_pred HHHHHHH--CCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHHHHHHHH----HhCCCC
Confidence 3444544 46999999996421 222 4456778999999999996 678776666665544433 346889
Q ss_pred EEEEcCCCCChhHHHHHHHHHH-hcCCCHHHHHHHHHhcC-CCccCCHHHHHHHHHHHhhcCC
Q 006606 204 ILVHCTHGHNRTGYMIVHFLMR-SQSMSVAQAIKKFAEVR-PPGIYKNEYIEALYTFYHEKRL 264 (639)
Q Consensus 204 VlVHC~~G~~RTG~li~aYLm~-~~g~s~~eAi~~~~~~R-p~~i~~~~~l~~L~~~y~~~~~ 264 (639)
|+|||++|+||||+++|+|||. ..|+++++|++.++++| +.++.+..|...|++|+..+..
T Consensus 136 VlVHC~aG~gRTg~~~a~~L~~~~~g~~~~~a~~~vr~~R~~~~~~~~~Q~~~l~~~~~~l~~ 198 (212)
T 1fpz_A 136 TLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQTIKQYNYLHEFRDKLAA 198 (212)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHCTTSSCSHHHHHHHTTHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 58999999999999999 7888899999999888876654
No 46
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=99.72 E-value=1.2e-17 Score=163.82 Aligned_cols=117 Identities=23% Similarity=0.392 Sum_probs=95.5
Q ss_pred CCCc--eEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChh
Q 006606 138 GRKL--GLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRT 215 (639)
Q Consensus 138 ~~~I--~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RT 215 (639)
..+| ++||||+.+.+. ....|++|+.+|+.|.. .++ +..++..+.+||+.....+++|+|||++|+|||
T Consensus 69 ~~gI~~~~Vi~l~~~~~~-----~~~~~~~~~~~p~~d~~-~~~---l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RS 139 (195)
T 2q05_A 69 SSEVKFKYVLNLTMDKYT-----LPNSNINIIHIPLVDDT-TTD---ISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRS 139 (195)
T ss_dssp TSSSCCSEEEECSSSCCC-----CTTCCCEEEECCCCCSS-SCC---CGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHH
T ss_pred hCCCCCCEEEEECCCCCC-----cccCCcEEEEEEcCCCC-ccc---HHHHHHHHHHHHHHHHHcCCcEEEEcCCCCChH
Confidence 4678 999999976533 23469999999998752 222 222344455677766667899999999999999
Q ss_pred HHHHHHHHHHhcCCC-----HHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcC
Q 006606 216 GYMIVHFLMRSQSMS-----VAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (639)
Q Consensus 216 G~li~aYLm~~~g~s-----~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (639)
|+++++|||...+|+ +++|++.++++||.++++.+|+++|.+||....
T Consensus 140 g~~v~~yL~~~~~~~~~~v~~~~A~~~vr~~R~~~~~n~~f~~qL~~~~~~~~ 192 (195)
T 2q05_A 140 GAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFKRQIIEKYVIDK 192 (195)
T ss_dssp HHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHhCCCccccCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHhcc
Confidence 999999999999999 999999999999999999999999999998654
No 47
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=99.69 E-value=4.1e-17 Score=153.85 Aligned_cols=117 Identities=25% Similarity=0.375 Sum_probs=94.6
Q ss_pred CCceEEEEcCCCCCCC-Cc-------chhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCC
Q 006606 139 RKLGLVIDLTNTTRYY-PT-------SDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTH 210 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y-~~-------~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~ 210 (639)
.+|++||||+.+.... .+ +.+...||+|+++|+.|+ ..|+.+.+..|+ +||++....+ +|||.+
T Consensus 27 ~gi~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~p~~d~-~~p~~~~~~~~~----~~i~~~~~~~---lVHC~a 98 (161)
T 2i6j_A 27 EGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDG-GVPSDSQFLTIM----KWLLSEKEGN---LVHCVG 98 (161)
T ss_dssp HTCCEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCCTT-CCCCHHHHHHHH----HHHHHCCTTE---EEECSS
T ss_pred CCCCEEEEcCchhhhhhhccchhhHHHHHHHcCceEEEecCCCC-CCCChHHHHHHH----HHHHHhCCCC---EEECCC
Confidence 3699999999653211 11 226678999999999886 677766665554 5665444333 999999
Q ss_pred CCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhhcC
Q 006606 211 GHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (639)
Q Consensus 211 G~~RTG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (639)
|+||||+++++|||...|+++++|++.+++.||.++++.+|..+|++++..+.
T Consensus 99 G~~Rtg~~~~~~l~~~~~~~~~~a~~~~r~~R~~~~~~~~q~~~l~~~~~~l~ 151 (161)
T 2i6j_A 99 GIGRTGTILASYLILTEGLEVESAIDEVRLVRPGAVQTYEQEMFLLRVEGMRK 151 (161)
T ss_dssp SSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCSCSHHHHHHHHHHHHTHH
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHH
Confidence 99999999999999988999999999999999999999999999999887653
No 48
>3vnn_A DNA ligase 4; non-homologous END joining, DNA repair, XRCC4; HET: DNA; 2.90A {Homo sapiens}
Probab=99.69 E-value=2e-16 Score=146.80 Aligned_cols=101 Identities=19% Similarity=0.299 Sum_probs=80.6
Q ss_pred eeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCcCCc--------ccccccCCCCeEeeEEEEEecCCCC----
Q 006606 328 YYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSN--------EGLGEKTHHFTLLDGEMIIDKLPDS---- 395 (639)
Q Consensus 328 Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~--------~~~~~~~~~~tlLDGElV~d~~~~~---- 395 (639)
|++++|+||+|+++++.++.+.|++|++. .++..||+.... ..+ .....++|||||||.....+.
T Consensus 1 f~~E~K~DG~R~q~~~~g~~v~l~SR~g~--d~t~~fPel~~~~~l~~~i~~~~-~~~~~~~iLDGEiv~~d~~~~~f~~ 77 (139)
T 3vnn_A 1 FYIETKLDGERMQMHKDGDVYKYFSRNGY--NYTDQFGASPTEGSLTPFIHNAF-KADIQICILDGEMMAYNPNTQTFMQ 77 (139)
T ss_dssp CCCCCCCCCEEEEEEEETTEEEEECSSCC--BCTTTSCSSTTC--CCSGGGSCC-CTTCCEEEEEEEEEEEETTTTEECC
T ss_pred CEEEEEECeEEEEEEEECCEEEEEeCCCC--CchhhccchhhhcchhHHHHHHH-hccCCceEeeeEEEEecCCCCCHHH
Confidence 78999999999999999999999999998 457889975421 111 112367999999999532211
Q ss_pred -------------CCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHh
Q 006606 396 -------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEV 431 (639)
Q Consensus 396 -------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i 431 (639)
...++.|++||+|++||++++++||.+|+++|++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~vFDlL~l~G~~L~~~pl~eRr~~L~~l~ 126 (139)
T 3vnn_A 78 KGTKFDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIF 126 (139)
T ss_dssp C-------------CCEEEEEEEEEEEETTEECSSSCHHHHHHHHHHHC
T ss_pred HHhhhhhhhhhhccCceEEEEEEEEEeECCcCcccCCHHHHHHHHHHHh
Confidence 013678999999999999999999999999999966
No 49
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.64 E-value=9.1e-16 Score=159.77 Aligned_cols=113 Identities=18% Similarity=0.192 Sum_probs=89.6
Q ss_pred CCceEEEEcCCCCC--CC--Ccch----hhcC-CcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcc-cCCCeEEEEc
Q 006606 139 RKLGLVIDLTNTTR--YY--PTSD----LKKE-GIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQK-HSKKYILVHC 208 (639)
Q Consensus 139 ~~I~~VIdLt~~~~--~y--~~~~----~~~~-gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~-~~~~~VlVHC 208 (639)
.+|++||||+.+.. ++ +... ++.. ||+|+++|+.|. . ...+...+..+.+||+++. ..|++|||||
T Consensus 38 ~GIt~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~-~---~~~l~~~~~~~~~~I~~~l~~~g~~VLVHC 113 (294)
T 3nme_A 38 IGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDF-D---AFDLRMRLPAVVGTLYKAVKRNGGVTYVHS 113 (294)
T ss_dssp TTEEEEEECCCHHHHHHTTCCHHHHHHHHHTCTTCEEEECCCCTT-C---HHHHHHHHHHHHHHHHHHHHHHCSEEEEEC
T ss_pred CCCCEEEECCCCcchhhccCChhhhhhhhhhcCCcEEEEEeCCCC-C---CCCHHHHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 47999999986532 11 2212 2344 799999999985 2 2345455677778888764 4588999999
Q ss_pred CCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHH
Q 006606 209 THGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALY 256 (639)
Q Consensus 209 ~~G~~RTG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~ 256 (639)
++|+||||++++||||...||++++|+++++++||. .+|.+++.+..
T Consensus 114 ~aG~sRS~tvv~ayLm~~~g~s~~~A~~~v~~~Rp~-~Pn~~~l~~~~ 160 (294)
T 3nme_A 114 TAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSC-FPKLDAIRNAT 160 (294)
T ss_dssp SSSSSHHHHHHHHHHHHTSCCCHHHHHHHHHHHCCC-CCCHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHhCCCHHHHHHHHHHhCCC-CCChhhhhHHH
Confidence 999999999999999999999999999999999999 89998877654
No 50
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=99.52 E-value=5.5e-15 Score=138.17 Aligned_cols=100 Identities=17% Similarity=0.263 Sum_probs=74.3
Q ss_pred CCceEEEEcCCCCCCCC-cchhhcCCcEEEEeeccCCCC---CCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCCh
Q 006606 139 RKLGLVIDLTNTTRYYP-TSDLKKEGIKHVKIQCKGRDA---VPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNR 214 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y~-~~~~~~~gI~y~~ip~~d~~~---~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~R 214 (639)
.+|++||||+.+..... ++.++..||+|+++|+.|... .++.+.+.+++ +++. ...+++|+|||++|+||
T Consensus 32 ~gi~~Vi~l~~~~e~~~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~~~~----~~i~--~~~~~~vlvHC~aG~~R 105 (151)
T 1xri_A 32 LGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMAL----KVLL--DEKNHPVLIHCKRGKHR 105 (151)
T ss_dssp HTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHH----HHHH--CGGGCSEEEECSSSSSH
T ss_pred CCCCEEEECCCCCcChhHHHHHHhcCCeEEecccccccCccccCCHHHHHHHH----HHHH--cCCCCCEEEECCCCCCH
Confidence 36999999996543211 223455799999999987421 22444454444 4444 23578999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHhcCCCc
Q 006606 215 TGYMIVHFLMRSQSMSVAQAIKKFAEVRPPG 245 (639)
Q Consensus 215 TG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~ 245 (639)
||+++|+||+ ..||+.++|++.++..|+..
T Consensus 106 Tg~~~a~~l~-~~g~~~~~a~~~~~~~~~~~ 135 (151)
T 1xri_A 106 TGCLVGCLRK-LQKWCLTSIFDEYQRFAAAK 135 (151)
T ss_dssp HHHHHHHHHH-HTTBCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHH-HhCCCHHHHHHHHHHhcCCC
Confidence 9999988877 58999999999999999873
No 51
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=99.17 E-value=1.1e-10 Score=109.96 Aligned_cols=93 Identities=14% Similarity=0.153 Sum_probs=71.4
Q ss_pred CCceEEEEcCCCCCCC-Cc------chhhcCCcE-EEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCC
Q 006606 139 RKLGLVIDLTNTTRYY-PT------SDLKKEGIK-HVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTH 210 (639)
Q Consensus 139 ~~I~~VIdLt~~~~~y-~~------~~~~~~gI~-y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~ 210 (639)
.+|++||||+.+.... .+ +.++..||+ |+++|+.+. .|+.+.+..|.+. +. ..+++|+|||++
T Consensus 41 ~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~--~~~~~~~~~~~~~----l~---~~~~pVlvHC~s 111 (156)
T 2f46_A 41 LGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR--DIQKHDVETFRQL----IG---QAEYPVLAYCRT 111 (156)
T ss_dssp HTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT--TCCHHHHHHHHHH----HH---TSCSSEEEECSS
T ss_pred CCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC--CCCHHHHHHHHHH----HH---hCCCCEEEECCC
Confidence 3699999998543321 11 134567999 999999873 5677777666543 33 247899999999
Q ss_pred CCChhHHHHHHHHHHhcCCCHHHHHHHHHhcC
Q 006606 211 GHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVR 242 (639)
Q Consensus 211 G~~RTG~li~aYLm~~~g~s~~eAi~~~~~~R 242 (639)
|. ||++++++||+. .||+.++|++.++++.
T Consensus 112 G~-Rs~~l~al~l~~-~g~~~~~a~~~~~~~g 141 (156)
T 2f46_A 112 GT-RCSLLWGFRRAA-EGMPVDEIIRRAQAAG 141 (156)
T ss_dssp SH-HHHHHHHHHHHH-TTCCHHHHHHHHHHTT
T ss_pred CC-CHHHHHHHHHHH-cCCCHHHHHHHHHHcC
Confidence 99 999999999986 7999999999999873
No 52
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=99.15 E-value=1.3e-10 Score=120.40 Aligned_cols=83 Identities=16% Similarity=0.277 Sum_probs=69.4
Q ss_pred cchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHH-HHhcCCCHHHH
Q 006606 156 TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFL-MRSQSMSVAQA 234 (639)
Q Consensus 156 ~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYL-m~~~g~s~~eA 234 (639)
.+.++..|++|+++|+.|+ .+|+.+.+..|++ |+.. ...+..|+|||.+|.||||+++|+|+ |...+++.+++
T Consensus 174 ~e~~~~~Gl~Y~rlPi~D~-~aP~~e~id~fl~----~v~~-l~~~~~i~vHC~aG~GRTgt~ma~y~ll~~~~vs~eei 247 (314)
T 3mmj_A 174 QEVAEAAGMRYFRIAATDH-VWPTPENIDRFLA----FYRT-LPQDAWLHFHSEAGVGRTTAFMVMTDMLKNPSVSLKDI 247 (314)
T ss_dssp HHHHHHTTCEEEEEEECTT-SCCCHHHHHHHHH----HHHT-CCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred HHHHHhCCCEEEEeCcCCC-CCCCHHHHHHHHH----HHHH-cCCCCCEEEECCCCCchHHHHHHHHHHHHCCCCCHHHH
Confidence 3567889999999999997 7999998888875 4443 23568999999999999999999995 45568999999
Q ss_pred HHHHHhcCCC
Q 006606 235 IKKFAEVRPP 244 (639)
Q Consensus 235 i~~~~~~Rp~ 244 (639)
++.++..-+.
T Consensus 248 i~r~~~lgg~ 257 (314)
T 3mmj_A 248 LYRQHEIGGF 257 (314)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHhCCc
Confidence 9999887653
No 53
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=99.08 E-value=5.6e-10 Score=115.49 Aligned_cols=141 Identities=18% Similarity=0.265 Sum_probs=96.5
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcch---------------
Q 006606 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD--------------- 158 (639)
Q Consensus 102 ~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~--------------- 158 (639)
..||+.-.||.++..+. ..++.+ .++..||-||... .|+....
T Consensus 77 ~~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmlt~~~E~g~~kc~~YwP~~~~~~~~g~~~V~~~~~ 142 (284)
T 1fpr_A 77 KTYIASQGCLEATVNDF--------WQMAWQ------ENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGE 142 (284)
T ss_dssp CEEECBBCCCGGGHHHH--------HHHHHH------TTCCEEEECSCCBCSSSCSBCCCSCCBTEEEEETTEEEEEEEE
T ss_pred ceEEEeCCCChhhHHHH--------HHHHhc------cCCCEEEECCcceECccccchhhCCCCCCCeEECCEEEEEEEE
Confidence 46888888888766554 344443 5788899888642 2332110
Q ss_pred ----------h--h-------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 159 ----------L--K-------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 159 ----------~--~-------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
+ . ...|.++++ ..+|++.+++...+..|+..+..... ....+++|+|||.+|+||||++
T Consensus 143 ~~~~~~~~r~l~v~~~~~~~~~r~V~h~~~~~WpD~~vP~~~~~~l~~~~~v~~~~~-~~~~~~pivVHCsaGvGRTGtf 221 (284)
T 1fpr_A 143 HDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQE-SLPHAGPIIVHSSAGIGRTGTI 221 (284)
T ss_dssp CCCSSBCCEEEEEEESSCSSSCEEEEECCBCCSCTTSCCSCSHHHHHHHHHHHHHHT-TSTTCCCEEEESSBSSHHHHHH
T ss_pred EecCCEEEEEEEEEECCCCCceEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-hcCCCCcEEEEcCCCCcHHHHH
Confidence 0 0 112334433 56787444445778888887765432 2235789999999999999999
Q ss_pred HHHHHH----HhcC----CCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 219 IVHFLM----RSQS----MSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 219 i~aYLm----~~~g----~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
||++++ ...| +++.+|+..+|+.|+.++.+..|...++.
T Consensus 222 ia~~~~l~~l~~~g~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 268 (284)
T 1fpr_A 222 IVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYV 268 (284)
T ss_dssp HHHHHHHHHHHHHCTTSCCCHHHHHHHHHTTSTTSSCSSHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceecHHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence 999865 3345 68999999999999999999887776653
No 54
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=99.04 E-value=5.4e-10 Score=113.67 Aligned_cols=143 Identities=22% Similarity=0.303 Sum_probs=97.5
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcch---------------
Q 006606 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD--------------- 158 (639)
Q Consensus 102 ~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~--------------- 158 (639)
..||+.-.||.++..+. ..++.+ .++..||-||... +|+..+.
T Consensus 52 ~~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~~~~kc~~YwP~~~~~~~g~~~V~~~~~~ 117 (253)
T 1p15_A 52 DSYIASQGPLLHTIEDF--------WRMIWE------WKSCSIVMLTELEERGQEKCAQYWPSDGLVSYGDITVELKKEE 117 (253)
T ss_dssp TCEEEECCCCSSSHHHH--------HHHHHH------TTCCEEEECSCSCSSSSCCSCCCSCSSSCCEETTEECCSCCCE
T ss_pred ceEEEeCCCChHHHHHH--------hHhhee------CCCCEEEECCccccCCeehhhhhcCCCCceEECCEEEEEEEEE
Confidence 36888889987765553 344443 5788899998643 2321100
Q ss_pred -----------hh------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHH
Q 006606 159 -----------LK------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIV 220 (639)
Q Consensus 159 -----------~~------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~ 220 (639)
+. ...|.++++ ..+|++.+++...+..|+..+...- ....+++|+|||.+|+||||++||
T Consensus 118 ~~~~~~~r~l~v~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~--~~~~~~pivVHCsaGvGRTGtfia 195 (253)
T 1p15_A 118 ECESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQ--QQSGNHPITVHCSAGAGRTGTFCA 195 (253)
T ss_dssp ECSSEEEEEEEEECSSCCEEEEEEEEEECCSCSSSCCSSSCSHHHHHHHHHHHT--TTTTSCCEEEESSSSSHHHHHHHH
T ss_pred ecCCEEEEEEEEEECCCCCceEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHHhh--hccCCCCEEEEcCCCCchhHHHHH
Confidence 00 122455554 4677754434556667776664431 134578999999999999999999
Q ss_pred HHHHHh-----cCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHh
Q 006606 221 HFLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYH 260 (639)
Q Consensus 221 aYLm~~-----~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~ 260 (639)
++++.. ..+++.+++..+|+.|+.++.+..|...+++.-.
T Consensus 196 ~~~~~~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~f~y~~~~ 240 (253)
T 1p15_A 196 LSTVLERVKAEGILDVFQTVKSLRLQRPHMVQTLEQYEFCYKVVQ 240 (253)
T ss_dssp HHHHHHHHHHHSCCCTTHHHHHHHTTSTTSSCSTTTTHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHhCccccCCHHHHHHHHHHHH
Confidence 988764 2578999999999999999999888877766443
No 55
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=99.02 E-value=2e-09 Score=111.68 Aligned_cols=93 Identities=20% Similarity=0.257 Sum_probs=71.7
Q ss_pred cEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHH
Q 006606 164 IKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKK 237 (639)
Q Consensus 164 I~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~-----~g~s~~eAi~~ 237 (639)
|.|+++. .+|++.+++...+..|+..+.+++.+ ...+++|+|||.+|+||||++||++++.. ...++.+++..
T Consensus 181 V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~~-~~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~vdv~~~v~~ 259 (291)
T 2hc1_A 181 IRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINR-SPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHD 259 (291)
T ss_dssp EEEEEECCCCSSSCCSCHHHHHHHHHHHHHHHHH-SSCCCCEEEECSSSSHHHHHHHHHHHHHHHHHHCC-CCHHHHHHH
T ss_pred EEEeeecCCCCCCCCCCHHHHHHHHHHHHHHHhc-CCCCCCEEEEeCCCCchhHHHHHHHHHHHHHhhcCCCCHHHHHHH
Confidence 4555554 47875554678888899888777653 23467999999999999999999988753 24689999999
Q ss_pred HHhcCCCccCCHHHHHHHHH
Q 006606 238 FAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 238 ~~~~Rp~~i~~~~~l~~L~~ 257 (639)
+|+.|+.++.+..|...++.
T Consensus 260 lR~qR~~~Vqt~~Qy~fiy~ 279 (291)
T 2hc1_A 260 LRLHRVHMVQTECQYVYLHQ 279 (291)
T ss_dssp HHTTSTTSSCCC-CHHHHHH
T ss_pred HHHhCcccCCCHHHHHHHHH
Confidence 99999999998877776654
No 56
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=99.01 E-value=2.1e-09 Score=112.83 Aligned_cols=93 Identities=20% Similarity=0.296 Sum_probs=70.5
Q ss_pred cEEEE-eeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHH----HhcC----CCHHHH
Q 006606 164 IKHVK-IQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLM----RSQS----MSVAQA 234 (639)
Q Consensus 164 I~y~~-ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm----~~~g----~s~~eA 234 (639)
|.+++ ...+|++.+++...+..|+..+..... ....+++|+|||.+|+||||++||++++ ...| +++.+|
T Consensus 202 V~h~~y~~WpD~gvP~~~~~~l~fl~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~g~~~~vdv~~~ 280 (316)
T 3b7o_A 202 VWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQE-SIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKT 280 (316)
T ss_dssp EEEEEECCCCSSSCCSSSHHHHHHHHHHHHHHH-TSTTCCCEEEEESSSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHH
T ss_pred EEEeeccCcccCCCCCChHHHHHHHHHHHHHHh-hcCCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCccCHHHH
Confidence 33443 456787544455778888887765433 2345789999999999999999998765 2335 689999
Q ss_pred HHHHHhcCCCccCCHHHHHHHHH
Q 006606 235 IKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 235 i~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
+..+|+.|+.++.+..|...++.
T Consensus 281 v~~lR~qR~~~Vqt~~Qy~fiy~ 303 (316)
T 3b7o_A 281 IQMVRSQRSGMVQTEAQYRFIYM 303 (316)
T ss_dssp HHHHHTTSTTCSCSHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHHHH
Confidence 99999999999999988877654
No 57
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=98.99 E-value=2.3e-09 Score=101.09 Aligned_cols=120 Identities=20% Similarity=0.230 Sum_probs=87.8
Q ss_pred CHHHHHHHHHHcCCCceEEEEcCCCCCCCC----cchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 006606 126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYP----TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSK 201 (639)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~----~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~ 201 (639)
+...+ ..+.+. ++..||++..+...-. .+.++..|++++.+|+ |. ..|+.+++.++++.+.+ ..|
T Consensus 29 ~~a~a-~~La~~--Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~-Dv-~~~~~~~v~~~~~~i~~------~~G 97 (157)
T 3gxh_A 29 NEQQF-SLLKQA--GVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPV-DW-QNPKVEDVEAFFAAMDQ------HKG 97 (157)
T ss_dssp CHHHH-HHHHHT--TCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCC-CT-TSCCHHHHHHHHHHHHH------TTT
T ss_pred CHHHH-HHHHHc--CCCEEEECCCcccccccccHHHHHHHcCCeEEEecC-CC-CCCCHHHHHHHHHHHHh------cCC
Confidence 34433 445444 5777999875432211 2345678999999999 43 46667888888765532 235
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHh
Q 006606 202 KYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYH 260 (639)
Q Consensus 202 ~~VlVHC~~G~~RTG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~ 260 (639)
+.|||||.+| .|++.++++||+. .|+++++| +.++..|| +.++..|+.+|..+..
T Consensus 98 ~dVLVnnAgg-~r~~~l~~~~~~~-~G~~~~~A-~~v~~~rp-i~~~~~~w~~~~~~~~ 152 (157)
T 3gxh_A 98 KDVLVHCLAN-YRASAFAYLYQLK-QGQNPNMA-QTMTPWND-ELAIYPKWQALLTEVS 152 (157)
T ss_dssp SCEEEECSBS-HHHHHHHHHHHHH-TTCCCCHH-HHTGGGTT-CGGGCHHHHHHHHHHH
T ss_pred CCEEEECCCC-CCHHHHHHHHHHH-cCCCHHHH-HHHHhhCc-ccCCcHHHHHHHHHHH
Confidence 5999999977 5999999999975 89999999 99999999 7788888887765543
No 58
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=98.99 E-value=3.2e-09 Score=110.47 Aligned_cols=140 Identities=16% Similarity=0.245 Sum_probs=97.1
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC-------CCCCcch--h--------------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT-------RYYPTSD--L-------------- 159 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~-------~~y~~~~--~-------------- 159 (639)
.||+.-.||.++..+. ..++.+ .++..||-||... .|+..+. +
T Consensus 102 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~e~~~kc~~YwP~~~~~~g~~~V~~~~~~~~~ 167 (297)
T 1jln_A 102 AFIATQGPMINTVNDF--------WQMVWQ------EDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVTGVTECD 167 (297)
T ss_dssp SEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSBSSSBCCCCCSCSSEEEETTEEEEEEEEEECS
T ss_pred eEEEECCCCcchHHHH--------HHHHHh------cCCCEEEECCCcccCccchhhhcCCCCccCCCEEEEEEeeeecC
Confidence 5888888988766654 344543 5789999998643 2332110 0
Q ss_pred -------------hcCCcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH
Q 006606 160 -------------KKEGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR 225 (639)
Q Consensus 160 -------------~~~gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~ 225 (639)
+...|.|+++. .+|++.+++...+..|+..+..... ....+++|+|||.+|+||||++||++++.
T Consensus 168 ~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfia~~~~~ 246 (297)
T 1jln_A 168 NYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRL-ASEGRGPVVVHCSAGIGRTGCFIATSIGC 246 (297)
T ss_dssp SEEEEEEEEEETTEEEEEEEEEECCSCTTSSCSCSHHHHHHHHHHHHHHH-TCTTSCCEEEESSSSSHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEecCCCeEEEEccccCCCCCCCCCCHHHHHHHHHHHHHHHh-hcCCCCCEEEEeCCCchhhHHHHHHHHHH
Confidence 01234455543 5787544455677788877755432 23457899999999999999999988743
Q ss_pred ----h-cCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 226 ----S-QSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 226 ----~-~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
. ..+++.+++..+|+.|+.++.+..|...++.
T Consensus 247 ~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 283 (297)
T 1jln_A 247 QQLKEEGVVDALSIVCQLRVDRGGMVQTSEQYEFVHH 283 (297)
T ss_dssp HHHHHHSEECHHHHHHHHHHHSTTSSCSHHHHHHHHH
T ss_pred HHHHhcCcccHHHHHHHHHHhCcCcCCcHHHHHHHHH
Confidence 2 3468999999999999999999988777654
No 59
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=98.97 E-value=2.4e-09 Score=119.79 Aligned_cols=81 Identities=16% Similarity=0.319 Sum_probs=67.6
Q ss_pred cchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-cCCCHHHH
Q 006606 156 TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-QSMSVAQA 234 (639)
Q Consensus 156 ~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~-~g~s~~eA 234 (639)
.+.++..||.|+++|+.|+ ..|+.+.+..|+..+ .. ...+..|+|||.+|.|||||++++|+|.+ .++++++|
T Consensus 491 ~e~~~~~Gi~Y~Ripi~D~-~aP~~e~id~fl~~v----~~-lp~~~~v~vHC~aG~GRTtT~mv~y~m~k~~~~s~~di 564 (629)
T 3f41_A 491 QQLVEKNGLHYYRIAATDH-IWPSAANIDEFINFT----RT-MPANAWLHFHCQAGAGRTTAYMAMYDMMKNPDVSLGDI 564 (629)
T ss_dssp HHHHHHTTCEEEEEEECTT-SCCCHHHHHHHHHHH----HH-SCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred HHHHHhCCCEEEEeCCCCC-CCCCHHHHHHHHHHH----Hh-cCCCCCEEEeCCCCCchHHHHHHHHHHHHcCCCCHHHH
Confidence 3467889999999999997 799999999987544 33 23467899999999999999999997764 47899999
Q ss_pred HHHHHhcC
Q 006606 235 IKKFAEVR 242 (639)
Q Consensus 235 i~~~~~~R 242 (639)
|+.....-
T Consensus 565 i~rq~~lg 572 (629)
T 3f41_A 565 LSRQYLLG 572 (629)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhhC
Confidence 99887654
No 60
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=98.97 E-value=4.3e-09 Score=108.98 Aligned_cols=91 Identities=16% Similarity=0.284 Sum_probs=67.6
Q ss_pred cEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHH----HHhc-CCCHHHHHHH
Q 006606 164 IKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFL----MRSQ-SMSVAQAIKK 237 (639)
Q Consensus 164 I~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYL----m~~~-g~s~~eAi~~ 237 (639)
|.|+++ ..+|++.+++.+.+..|+..+... ...+++|+|||.+|+||||++||+++ ++.. .+++.+++..
T Consensus 175 V~h~~y~~WpD~gvP~~~~~~l~~i~~v~~~----~~~~~PivVHCsaGvGRTGtfia~d~~~~~l~~~~~v~~~~~v~~ 250 (287)
T 2b49_A 175 VTHLQYVAWPDHGVPDDSSDFLEFVNYVRSL----RVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRK 250 (287)
T ss_dssp EEEEEECCSCSSSCCSSCHHHHHHHHHHHHH----CCTTCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred EEEEeeccCCCCCCCCCHHHHHHHHHHHHHh----ccCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 344443 467775444456777777665433 33468999999999999999999864 3433 3699999999
Q ss_pred HHhcCCCccCCHHHHHHHHHH
Q 006606 238 FAEVRPPGIYKNEYIEALYTF 258 (639)
Q Consensus 238 ~~~~Rp~~i~~~~~l~~L~~~ 258 (639)
+|+.|+.++.+..|...+++.
T Consensus 251 lR~qR~~~Vqt~~Qy~fiy~~ 271 (287)
T 2b49_A 251 MRDQRAMMVQTSSQYKFVCEA 271 (287)
T ss_dssp HHTTSTTCSCSHHHHHHHHHH
T ss_pred HHHhcccccCCHHHHHHHHHH
Confidence 999999999999988877653
No 61
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A*
Probab=98.96 E-value=4.7e-09 Score=109.60 Aligned_cols=141 Identities=18% Similarity=0.271 Sum_probs=94.5
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC-------CCCCcch--hh-------------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT-------RYYPTSD--LK------------- 160 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~-------~~y~~~~--~~------------- 160 (639)
.||+.-.||.++..+. ..++.+ .++..||-||... .|+..+. +.
T Consensus 110 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~e~~~kc~~YwP~~~~~~g~~~V~~~~~~~~~ 175 (305)
T 2cjz_A 110 VYIATQGPIVSTVADF--------WRMVWQ------EHTPIIVMITNIEEMNEKCTEYWPEEQVAYDGVEITVQKVIHTE 175 (305)
T ss_dssp SEEEEECCCGGGHHHH--------HHHHHH------HTCCEEEEEC---------CCCSCSSEEEETTEEEEEEEEEECS
T ss_pred eEEEeCCCccccHHHH--------HHHHHh------cCCCEEEEccCccccccchhhhcCCCCceECCEEEEEEEEEecC
Confidence 5888888988766654 345554 3688899888643 2332110 10
Q ss_pred --------------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH
Q 006606 161 --------------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR 225 (639)
Q Consensus 161 --------------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~ 225 (639)
...|.++++ ..+|++.+++...+..|+..+..........+++|+|||.+|+||||++||++++.
T Consensus 176 ~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l 255 (305)
T 2cjz_A 176 DYRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSAGIGRTGCFIATSICC 255 (305)
T ss_dssp SEEEEEEEEEC--CEEEEEEEEECCCCSSCCGGGHHHHHHHHHHHHHHHHHTCSSCCCEEEEESSSSHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEcCcceEEEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCEEEEeCCCcchhHHHHHHHHHH
Confidence 112334333 25676433355677777777655333334467899999999999999999998753
Q ss_pred -----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 226 -----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 226 -----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
...+++.+++..+|+.|+..+.+..|...++.
T Consensus 256 ~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~ 292 (305)
T 2cjz_A 256 QQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHH 292 (305)
T ss_dssp HHHHHHSCBCHHHHHHHHHHHSTTSSCSHHHHHHHHH
T ss_pred HHHHhcCCccHHHHHHHHHHhCcccCCCHHHHHHHHH
Confidence 34579999999999999999999888777654
No 62
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=98.95 E-value=8.4e-09 Score=106.81 Aligned_cols=141 Identities=18% Similarity=0.246 Sum_probs=97.9
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcch----h----------
Q 006606 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD----L---------- 159 (639)
Q Consensus 102 ~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~----~---------- 159 (639)
..||+.-.||.++..+. ..++.+ .++..||-||... .|+..+. +
T Consensus 79 ~~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~g~~~V~~~~~ 144 (288)
T 4grz_A 79 KTYIASQGCLEATVNDF--------WQMAWQ------ENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGE 144 (288)
T ss_dssp CCEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCCTTCEEEETTEEEEEEEE
T ss_pred ceeEEcCCCchHHHHHH--------HHHHHH------hCCCEEEECCchhhCCcccccccCCCCCCceEecCEEEEEEEE
Confidence 46899999988876654 345544 5788899888631 2332110 0
Q ss_pred --------------------hcCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 160 --------------------KKEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 160 --------------------~~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
+...|.|+++ ..+|++.+++...+..|+..+...... ...+++|+|||.+|+||||++
T Consensus 145 ~~~~~~~~r~l~v~~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~~~~v~~~~~~-~~~~~PivVHCsaGvGRTGtf 223 (288)
T 4grz_A 145 HDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQES-LPHAGPIIVHSSAGIGRTGTI 223 (288)
T ss_dssp EECSSEEEEEEEEEETTCTTCCEEEEEEEECSCCTTSCCSSSHHHHHHHHHHHHHHHH-STTCCCEEEECSSSSHHHHHH
T ss_pred EecCCeEEEEEEEEecCCCCceEEEEEEEeCCcCcCCcccChHHHHHHHHHHHHHHhh-cCCCCcEEEEeCCCCcHHHHH
Confidence 0012334443 256765444667888888887665442 235689999999999999999
Q ss_pred HHHHHHH----hcC----CCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 219 IVHFLMR----SQS----MSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 219 i~aYLm~----~~g----~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
||++++. ..| +++.+++..+|+.|+.++.+..|...++.
T Consensus 224 iaid~~l~~l~~~~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 270 (288)
T 4grz_A 224 IVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYV 270 (288)
T ss_dssp HHHHHHHHHHHHHCTTSCCCHHHHHHHHHTTSTTCSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHhcccccCCHHHHHHHHH
Confidence 9998863 234 78999999999999999999988776653
No 63
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=98.95 E-value=5e-09 Score=108.46 Aligned_cols=140 Identities=18% Similarity=0.285 Sum_probs=95.5
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcch---------------
Q 006606 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD--------------- 158 (639)
Q Consensus 102 ~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~--------------- 158 (639)
..||+.-.||.++..+. ..++.+ .++..||-||... .|+..+.
T Consensus 90 ~~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~g~~~V~~~~~~~ 155 (286)
T 2ooq_A 90 RHYIATQGPMQETVKDF--------WRMIWQ------ENSASIVMVTNLVEVGRVKCVRYWPDDTEVYGDIKVTLIETEP 155 (286)
T ss_dssp TCEEEECCCCTTTHHHH--------HHHHHH------HTCCEEEECSCSEETTEECSCCCSCSSEEEEBTEEEEEEEEEE
T ss_pred ccEEEEcCCCcchHHHH--------HHHHHh------cCCCEEEECCCceeCCccccccccCCCccEECCEEEEEEEEEe
Confidence 36888888887766554 344544 3788999998642 2332110
Q ss_pred ----------hhc------CCcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHH
Q 006606 159 ----------LKK------EGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (639)
Q Consensus 159 ----------~~~------~gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~a 221 (639)
+.. ..|.++++. .+|++.+++...+..|+..+... ....+++|+|||.+|+||||++||+
T Consensus 156 ~~~~~~r~l~v~~~~~~~~r~V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~---~~~~~~PivVHCsaGvGRTGtfiai 232 (286)
T 2ooq_A 156 LAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLGFVRQVKFL---NPPEAGPIVVHCSAGAGRTGCFIAI 232 (286)
T ss_dssp CSSEEEEEEEEEETTSCCCEEEEEEEECSCCTTCCCSCSHHHHHHHHHHHHH---SCTTSCCEEEECSSSSHHHHHHHHH
T ss_pred cCCEEEEEEEEeeccCCCCeEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHh---cCCCCCcEEEEeCCCCcHHHHHHHH
Confidence 111 114444443 57775444456677776655432 1235689999999999999999999
Q ss_pred HHHHh-----cCCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006606 222 FLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (639)
Q Consensus 222 YLm~~-----~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (639)
++|.. ...++.+++..+|+.|+.++.+..|...++..
T Consensus 233 ~~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~~ 274 (286)
T 2ooq_A 233 DTMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDA 274 (286)
T ss_dssp HHHHHHHHHHSEECHHHHHHHHHHHSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCHHHHHHHHHH
Confidence 88753 24689999999999999999999888877653
No 64
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A
Probab=98.94 E-value=6.2e-09 Score=108.21 Aligned_cols=137 Identities=24% Similarity=0.376 Sum_probs=92.3
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcc--hh--h----------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS--DL--K---------- 160 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~--~~--~---------- 160 (639)
.||+.-.||.++..+. ..++.+ .++..||-||... .|+..+ .. .
T Consensus 93 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~~~g~~~V~~~~~~ 158 (295)
T 2gjt_A 93 EYIATQGPLPETRNDF--------WKMVLQ------QKSQIIVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMISEE 158 (295)
T ss_dssp CEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCSSSSCEEETTEEEEEEEEE
T ss_pred cEEEecCCCccHHHHH--------HHHHHh------cCCCEEEEccccccCCeecccccCCCCCCceEEeeEEEEEEEEE
Confidence 6888888988766554 344543 5799999999642 233211 11 0
Q ss_pred -----------------cCCcEEEE-eeccCCCCCCCH---HHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHH
Q 006606 161 -----------------KEGIKHVK-IQCKGRDAVPDN---ASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMI 219 (639)
Q Consensus 161 -----------------~~gI~y~~-ip~~d~~~~P~~---~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li 219 (639)
...|.|++ ...+|+ .+|+. +.+..|+..+.+.. ...+++|+|||.+|+||||++|
T Consensus 159 ~~~~~~~r~l~l~~~~~~r~V~h~~y~~WPD~-gvP~~~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfi 234 (295)
T 2gjt_A 159 EQDDWACRHFRINYADEMQDVMHFNYTAWPDH-GVPTANAAESILQFVHMVRQQA---TKSKGPMIIHCSAGVGRTGTFI 234 (295)
T ss_dssp ECSSEEEEEEEEEETTEEEEEEEEEECCCCCS-SSCCHHHHHHHHHHHHHHHHHH---HHCCSCEEEESSSSSHHHHHHH
T ss_pred eccceEEEEEEEEECCcccEEEEEeecCCCCC-CCCCcccHHHHHHHHHHHHHhh---ccCCCcEEEEECCCCccchHHH
Confidence 01123443 346776 57764 34555555443322 2457899999999999999999
Q ss_pred HH-HHHHh----cCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 220 VH-FLMRS----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 220 ~a-YLm~~----~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
|+ +||.. ...++.+++..+|..|+.++.+..|...+++
T Consensus 235 aid~ll~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 277 (295)
T 2gjt_A 235 ALDRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIHQ 277 (295)
T ss_dssp HHHHHHHHHHHCSEECHHHHHHHHHTTSTTSSCSHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHhhccccCCCHHHHHHHHH
Confidence 88 56654 2468999999999999999999888776654
No 65
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}
Probab=98.92 E-value=1.3e-08 Score=106.94 Aligned_cols=139 Identities=17% Similarity=0.282 Sum_probs=95.0
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcc----hh-----------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS----DL----------- 159 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~----~~----------- 159 (639)
+||+.-.||.++..+. ..++.+ .++..||-||... .|+... .+
T Consensus 114 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kC~~YWP~~~~~~~~g~~~V~~~~~~ 179 (320)
T 2i75_A 114 QYIACQGPLPHTCTDF--------WQMTWE------QGSSMVVMLTTQVERGRVKCHQYWPEPTGSSSYGCYQVTCHSEE 179 (320)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECSCCCSCCTTCEEEETTEEEEECCCB
T ss_pred eEEEEcCCchhhHHHH--------HHHHHh------cCCCEEEEccccccCCcccccccCCCCCCceEECCEEEEEEEee
Confidence 4888888887766554 344543 5788899998642 233211 00
Q ss_pred ------------h------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHH
Q 006606 160 ------------K------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIV 220 (639)
Q Consensus 160 ------------~------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~ 220 (639)
. ...|.|+++ ..+|++.+++...+..|+..+.... ...+++|+|||.+|+||||++||
T Consensus 180 ~~~~~~~r~l~v~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfia 256 (320)
T 2i75_A 180 GNTAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKR---AGKEEPVVVHCSAGIGRTGVLIT 256 (320)
T ss_dssp CCSSEEEEEEEEEETTTTEEEEEEEEEECCCCSSSSCSCTHHHHHHHHHHHHHH---TTCCSCEEEECSSSSSHHHHHHH
T ss_pred ecCCEEEEEEEEEEcCCCCceEEEEeeecCCCCCCCCCchHHHHHHHHHHHHHh---ccCCCCEEEEcCCCCcHHHHHHH
Confidence 0 112444443 4677754445677777777665432 23478999999999999999998
Q ss_pred HH----HHHhc-CCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006606 221 HF----LMRSQ-SMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (639)
Q Consensus 221 aY----Lm~~~-g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (639)
+. +++.. .+++.+++..+|+.|+.++.+..|...+++.
T Consensus 257 id~~l~~l~~~~~v~~~~~v~~lR~qR~~~Vqt~~Qy~fiy~~ 299 (320)
T 2i75_A 257 METAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEA 299 (320)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHTTSTTCSCSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHhCcCCCCCHHHHHHHHHH
Confidence 74 33433 3689999999999999999999988877754
No 66
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Probab=98.91 E-value=9e-09 Score=107.67 Aligned_cols=138 Identities=18% Similarity=0.333 Sum_probs=93.2
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCC--------CCCCCcc-----hhh---------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNT--------TRYYPTS-----DLK--------- 160 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~--------~~~y~~~-----~~~--------- 160 (639)
.||+.-.||.++..+. ..++.+ .++..||-||.. .+|+..+ .+.
T Consensus 98 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kc~~YwP~~~~~~~~~g~~~V~~~~~ 163 (309)
T 2p6x_A 98 AYIATQGPLSTTLLDF--------WRMIWE------YSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAE 163 (309)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCCTTSCCEEETTEEEEEEEE
T ss_pred eEEEeCCCChhHHHHH--------HHHHHc------CCCCEEEECCCcccCccccccccCCCCCCCceEEcCEEEEEEEE
Confidence 6889999988776654 345554 579999999854 1243211 010
Q ss_pred ------------------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHH
Q 006606 161 ------------------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (639)
Q Consensus 161 ------------------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~a 221 (639)
...|.++++ ..+|++.+++...+..|+..+..+. ...+++|+|||.+|+||||++||+
T Consensus 164 ~~~~~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfiai 240 (309)
T 2p6x_A 164 KRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQ---EDDSVPICIHCSAGCGRTGVICAI 240 (309)
T ss_dssp EECSSEEEEEEEEEETTEEEEEEEEEECCCCCTTCGGGGHHHHHHHHHHHHHC---CSCSSCEEEECSSSSSHHHHHHHH
T ss_pred EecCCEEEEEeeecCCCCCeEEEEEeeeccccCCCCCCHHHHHHHHHHHHHHh---ccCCCcEEEEeCCCCcHHHHHHHH
Confidence 012333333 3577643334566666766554431 235789999999999999999998
Q ss_pred HH----HHhcC----CCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 222 FL----MRSQS----MSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 222 YL----m~~~g----~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
+. ++... +++.+++..+|+.|+..+.+..|...+++
T Consensus 241 d~~~~~l~~~~~~~~~dv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 284 (309)
T 2p6x_A 241 DYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYN 284 (309)
T ss_dssp HHHHHHHHTTCCCTTCCHHHHHHHHHTTSTTSSCSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCccCHHHHHHHHHHhCccccCCHHHHHHHHH
Confidence 64 34322 68999999999999999999988776654
No 67
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens}
Probab=98.90 E-value=1.8e-08 Score=106.14 Aligned_cols=88 Identities=22% Similarity=0.287 Sum_probs=67.9
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhc-------ccCCCeEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHH
Q 006606 171 CKGRDAVPDNASVNNFVYEVTQFLSRQ-------KHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKF 238 (639)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~-------~~~~~~VlVHC~~G~~RTG~li~aYLm~~-----~g~s~~eAi~~~ 238 (639)
.+|++.+++...+..|+..+....+.. ...+++|+|||.+|+||||++||++++.. ...++.+++..+
T Consensus 215 WPD~gvP~~~~~~l~fl~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~l 294 (325)
T 2bzl_A 215 WPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLEGTKNRHPPIVVHCSAGVGRTGVLILSELMIYCLEHNEKVEVPMMLRLL 294 (325)
T ss_dssp CCSSSCCSCHHHHHHHHHHHHHHHHHHTGGGTTSCCCCCCEEEESSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhhcccccccCCCCCEEEEeCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 567755556677777777665443211 23468999999999999999999988753 347999999999
Q ss_pred HhcCCCccCCHHHHHHHHHH
Q 006606 239 AEVRPPGIYKNEYIEALYTF 258 (639)
Q Consensus 239 ~~~Rp~~i~~~~~l~~L~~~ 258 (639)
|+.|+..+.+..|...+++.
T Consensus 295 R~qR~~~Vqt~~QY~Fiy~~ 314 (325)
T 2bzl_A 295 REQRMFMIQTIAQYKFVYQV 314 (325)
T ss_dssp HTTSTTCSCSHHHHHHHHHH
T ss_pred HHhcccCCCCHHHHHHHHHH
Confidence 99999999999888877653
No 68
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A
Probab=98.90 E-value=7e-09 Score=108.45 Aligned_cols=140 Identities=20% Similarity=0.307 Sum_probs=93.0
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC-------CCCCcch--hh-------------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT-------RYYPTSD--LK------------- 160 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~-------~~y~~~~--~~------------- 160 (639)
.||+.-.||.++..+. ..++.+ .++..||-||... .|+..+. +.
T Consensus 113 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~~~kc~~YwP~~~~~~g~~~V~~~~~~~~~ 178 (309)
T 1zc0_A 113 VYIATQGPMPNTVSDF--------WEMVWQ------EEVSLIVMLTQLREGKEKCVHYWPTEEETYGPFQIRIQDMKECP 178 (309)
T ss_dssp SEEEEECCCGGGHHHH--------HHHHHH------TTCCEEEEECCTTC----CCCCSCSSEEEETTEEEEEEEEEECS
T ss_pred eEEEecCcccccHHHH--------HHHHHh------cCCCEEEECCCccccccccccccCCCCceEccEEEEEEEEEecC
Confidence 6888888888766654 344543 5788899998643 2332111 10
Q ss_pred --------------cCCcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH
Q 006606 161 --------------KEGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR 225 (639)
Q Consensus 161 --------------~~gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~ 225 (639)
...|.++++. .+|++.+++...+..|+..+.... .....+++|+|||.+|+||||++||++++.
T Consensus 179 ~~~~r~l~v~~~~~~r~V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~-~~~~~~~PIvVHCsaGvGRTGtfiai~~~l 257 (309)
T 1zc0_A 179 EYTVRQLTIQYQEERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESP-ETAAHPGPIVVHCSAGIGRTGCFIATRIGC 257 (309)
T ss_dssp SEEEEEEEEEETTEEEEEEEEEECSCCTTSCCSCHHHHHHHHHHHHTSC-CCCSSCCCEEEEESSSSHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEecCCceEEEEEEEecccCCCCCCCHHHHHHHHHHHHHHH-hhcCCCCCEEEEeCCCcchhHHHHHHHHHH
Confidence 1123344432 477654444566666665543211 112356899999999999999999998763
Q ss_pred -----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 226 -----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 226 -----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
...+++.+++..+|+.|+.++.+..|...++.
T Consensus 258 ~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 294 (309)
T 1zc0_A 258 QQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHH 294 (309)
T ss_dssp HHHHHHSEECHHHHHHHHHHHSTTCSCCHHHHHHHHH
T ss_pred HHHHhcCcccHHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence 33579999999999999999999988777654
No 69
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=98.88 E-value=6.1e-09 Score=116.57 Aligned_cols=82 Identities=17% Similarity=0.287 Sum_probs=68.2
Q ss_pred cchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhc--CCCHHH
Q 006606 156 TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQ--SMSVAQ 233 (639)
Q Consensus 156 ~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~--g~s~~e 233 (639)
.+.++..|+.|++||++|+ ..|+.+.+..|++. +.. ...+..|+|||.+|.||||+++|+|+|.+. ++++++
T Consensus 193 ~el~~~~Gl~Y~Ripi~D~-~~P~~e~id~fl~~----v~~-l~~~~~i~vHC~AG~GRTgT~m~~y~m~k~~~~~s~~d 266 (629)
T 3f41_A 193 EEMVKQHGANYFRLTLQDH-FRPDDPDVDKFLEF----YKS-LPKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDD 266 (629)
T ss_dssp HHHHHTTTCEEEEEEECTT-SCCCHHHHHHHHHH----HHT-SCTTCEEEEECSSSSHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred HHHHHhCCCeEEEccCCCC-CCCCHHHHHHHHHH----HHh-cCCCCCEEEECCCCCCHHHHHHHHHHHHhccCCCCHHH
Confidence 3457889999999999997 79999999988754 443 234678999999999999999999988875 689999
Q ss_pred HHHHHHhcCC
Q 006606 234 AIKKFAEVRP 243 (639)
Q Consensus 234 Ai~~~~~~Rp 243 (639)
||...+..-+
T Consensus 267 iI~Rq~~lgg 276 (629)
T 3f41_A 267 IIQRQKLIGI 276 (629)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHhcC
Confidence 9988876543
No 70
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2
Probab=98.86 E-value=1.6e-08 Score=105.53 Aligned_cols=139 Identities=18% Similarity=0.272 Sum_probs=95.1
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcch----------------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (639)
.||+.-.||.++..+. ..++.+ .++..||-||... .|+..+.
T Consensus 99 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~~g~~~V~~~~~~~ 164 (302)
T 1yfo_A 99 KFIAAQGPKEETVNDF--------WRMIWE------QNTATIVMVTNLKERKECKCAQYWPDQGCWTYGNVRVSVEDVTV 164 (302)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECSCCCSCSSSEEEETTEEEEEEEEEE
T ss_pred eEEEEhhcchhhHHHH--------HHHHhc------cCCCEEEEccccccCCeeecceeccCCCCeEeccEEEEEEEEEE
Confidence 6888888988766654 344543 5788899998642 2332110
Q ss_pred ----------hhc----------CCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHH
Q 006606 159 ----------LKK----------EGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGY 217 (639)
Q Consensus 159 ----------~~~----------~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~ 217 (639)
+.. ..|.++++ ..+|++.+++...+..|+..+... ....+++|+|||.+|+||||+
T Consensus 165 ~~~~~~r~l~v~~~~~~~~~~~~r~V~h~~y~~WpD~gvP~~~~~~l~~i~~v~~~---~~~~~~PivVHCsaGvGRTGt 241 (302)
T 1yfo_A 165 LVDYTVRKFCIQQVGDVTNRKPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKAC---NPQYAGAIVVHCSAGVGRTGT 241 (302)
T ss_dssp CSSEEEEEEEEEC---------CEEEEEEEECCCCSSSCCSCSHHHHHHHHHHHHH---SCTTSCCEEEECSSSSHHHHH
T ss_pred cCCcEEEEEEEEEecccCCCCcceEEEEEeecccCCCCcCCCHHHHHHHHHHHHHh---ccCCCCCEEEECCCCCcHHHH
Confidence 000 12333433 356775444556777777766542 123568999999999999999
Q ss_pred HHHHHHHH-----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006606 218 MIVHFLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (639)
Q Consensus 218 li~aYLm~-----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (639)
+||++++. ...+++.+++..+|+.|+.++.+..|...+++.
T Consensus 242 fiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~~ 287 (302)
T 1yfo_A 242 FVVIDAMLDMMHSERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQA 287 (302)
T ss_dssp HHHHHHHHHHHHHSSEECHHHHHHHHTTTSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHhccccCCCHHHHHHHHHH
Confidence 99987653 224799999999999999999999888777653
No 71
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S
Probab=98.84 E-value=5.9e-09 Score=112.18 Aligned_cols=100 Identities=15% Similarity=0.259 Sum_probs=75.2
Q ss_pred CcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhc-----ccCCCeEEEEcCCCCChhHHHHHHHHHHhc-CCCHHHHH
Q 006606 163 GIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQ-----KHSKKYILVHCTHGHNRTGYMIVHFLMRSQ-SMSVAQAI 235 (639)
Q Consensus 163 gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~-----~~~~~~VlVHC~~G~~RTG~li~aYLm~~~-g~s~~eAi 235 (639)
.|.+++++ .+|++.+++...+..|+..+....... ....++|+|||.+|+||||++||+++|+.. .+++.+++
T Consensus 270 ~V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~PivVHCsAGvGRTGtfiaidll~~~~~vdv~~~v 349 (383)
T 1g4w_R 270 TIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVR 349 (383)
T ss_dssp EEEEEEECSCCTTSCCSSHHHHHHHHHHHHTSCCCCCTTCSCTTSSCCEEESSSSSHHHHHHHHHHHHHHCTTCCHHHHH
T ss_pred EEEEEeeCCcCCcCCCCCHHHHHHHHHHHHHHHhhhccccccCCCCCEEEEeCcCCcHHHHHHHHHHHHhCCCCCHHHHH
Confidence 45677766 788754445666777766554332110 012467899999999999999999999865 37999999
Q ss_pred HHHHhcCCC-ccCCHHHHHHHHHHHhhc
Q 006606 236 KKFAEVRPP-GIYKNEYIEALYTFYHEK 262 (639)
Q Consensus 236 ~~~~~~Rp~-~i~~~~~l~~L~~~y~~~ 262 (639)
..+|+.|++ .+.+..|...+++....+
T Consensus 350 ~~lR~qR~g~~Vqt~~Qy~fl~~~~~~l 377 (383)
T 1g4w_R 350 ADFRDSRNNRMLEDASQFVQLKAMQAQL 377 (383)
T ss_dssp HHHHHHTCTTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999995 999999999988765543
No 72
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=98.84 E-value=2.6e-08 Score=105.59 Aligned_cols=142 Identities=19% Similarity=0.322 Sum_probs=98.6
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcch---h-----------
Q 006606 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---L----------- 159 (639)
Q Consensus 102 ~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---~----------- 159 (639)
..||+.-.||.++..+. ..++.+ .++..||-||... .|+..+. +
T Consensus 112 ~~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kC~~YWP~~~~~~~g~~~V~~~~~~ 177 (342)
T 3i36_A 112 KDFIATQGPLPNTLKDF--------WRMVWE------KNVYAIVMLTKCVEQGRTKCEEYWPSKQAQDYGDITVAMTSEV 177 (342)
T ss_dssp TSEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSBSSSSBCSCCCSCCSSCEEETTEEEEEEEEE
T ss_pred ceEEEECCCChhhHHHH--------HHHHHH------cCCcEEEecCcccccCccccccccccCCCeeeCCEEEEEEEEE
Confidence 36888888988766554 344443 5789999998531 2332111 0
Q ss_pred ------------------hcCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHH
Q 006606 160 ------------------KKEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIV 220 (639)
Q Consensus 160 ------------------~~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~ 220 (639)
+..-|.++++ ..+|++.+++...+..|+..+.++... ...+++|+|||.+|+||||++||
T Consensus 178 ~~~~~~~r~l~v~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~f~~~v~~~~~~-~~~~~PiVVHCSAGvGRTGtfia 256 (342)
T 3i36_A 178 VLPEWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQ-IPPESPILVHCSAGVGRTGTFIA 256 (342)
T ss_dssp ECSSEEEEEEEEEETTTTEEEEEEEEEECCSCSSSSCSCSHHHHHHHHHHHHHHTT-SCSSCCEEEESSSSSHHHHHHHH
T ss_pred ecCCeEEEEEEEEecCCCceEEEEEEeecCcCcCCCCCCHHHHHHHHHHHHHHHHh-CCCCCCEEEEcCCCChHHHHHHH
Confidence 0012333433 346775444667778888877766542 23568999999999999999999
Q ss_pred HHHHH-----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006606 221 HFLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (639)
Q Consensus 221 aYLm~-----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (639)
..++- ....++.+++..+|+.|+..+.+..|...+++.
T Consensus 257 id~~l~~l~~~~~vdv~~~V~~lR~qR~~mVqt~~QY~Fiy~~ 299 (342)
T 3i36_A 257 IDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQC 299 (342)
T ss_dssp HHHHHHHHHHHSEECHHHHHHHHHTTSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHhCccccCCHHHHHHHHHH
Confidence 87663 335799999999999999999999988887653
No 73
>3qwu_A DNA ligase; structural genomics, PSI-2, midwest center for structural GE MCSG; HET: DNA ADN; 2.35A {Aquifex aeolicus}
Probab=98.83 E-value=1.8e-08 Score=106.17 Aligned_cols=162 Identities=15% Similarity=0.132 Sum_probs=98.0
Q ss_pred CCCCCccccccchhhhhhhcccceeeeecCceeEEEEEEECCEEEEEeCCCcccc-ccCcCCCcCCcccccccCCCCeEe
Q 006606 305 MQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRR-VQMRFPCRNSNEGLGEKTHHFTLL 383 (639)
Q Consensus 305 ~~FPGsqPVsl~r~~l~~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~-v~~~FP~~~~~~~~~~~~~~~tlL 383 (639)
.+||-=.-+-+=..-+.......|+|+||.||.++-++..++++++++|.|.+.. .+-++|...++ .+. ..+++.+|
T Consensus 52 ~GyP~I~R~~~L~~~i~~~f~~~~~veEKLDG~NVRi~~~dG~ilA~TRgG~icP~tT~r~~~~~~~-~f~-~~~P~l~L 129 (370)
T 3qwu_A 52 WGYPHIGRIFLLETGLREQFEAPFWVEEKVDGYNTRIFKYGDNYYALSRGGFICPFTTDRLPDLIDL-RIL-DENPDLVI 129 (370)
T ss_dssp CCCCCCEEESCHHHHHHHHCSSCEEEEEECSSEEEEEEEETTEEEEECTTSCBCHHHHHHHHHHCCC-HHH-HHCTTEEE
T ss_pred CCCCChhhhhchhhhhhhcCCCcEEEEEeeCCeEEEEEEECCEEEEEcCCCcccCcchhhhhhhcCc-hhh-hcCCCeEE
Confidence 4678554443333333333357999999999977777666788999999987420 01122222111 111 12479999
Q ss_pred eEEEEEecCC------CCCCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCc
Q 006606 384 DGEMIIDKLP------DSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPF 457 (639)
Q Consensus 384 DGElV~d~~~------~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~pf 457 (639)
||||+....+ ........|+|||+... ....-+|+.+|+++++++-+ |.
T Consensus 130 dGEl~g~~npy~~~s~~y~~~~i~F~VFDV~d~--~~~~~L~~~eR~~ll~~~~l-p~---------------------- 184 (370)
T 3qwu_A 130 CAEVAGPENPYIEESPPYVKEDVQLFVFDFMKK--NEQGFLSQEEKMELIEKYNL-PH---------------------- 184 (370)
T ss_dssp EEEEECTTCSSCSCCCTTCCSSCEEEEEEEEET--TCCSCCCHHHHHHHHHHHTC-CB----------------------
T ss_pred EEEEEcCCCCccccCCcccccCceEEEEeCccc--cCCCcCCHHHHHHHHHHCCC-CC----------------------
Confidence 9999986432 11114679999999974 34566899999999887532 11
Q ss_pred EEEecceeech--hHHHHHHHhcccccCCCceEEEEeCC
Q 006606 458 RVRRKDFWLLS--TVNKLLKEFIPKLSHDADGLVFQGWD 494 (639)
Q Consensus 458 ~I~~K~~~~~~--~~~~l~~~~~~~l~h~~DGLIf~p~~ 494 (639)
|..-..+++. +.+.|.+-+......+.||||++..+
T Consensus 185 -V~ii~~~~~~~~~~~~l~~~l~~l~~~g~EGVVlK~~~ 222 (370)
T 3qwu_A 185 -VEILGRFTASEEGIKKIKEILKRFNEEGREGVVFKEDS 222 (370)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred -ccEEEEeCCCCCCHHHHHHHHHHHHhCCCcEEEEecCc
Confidence 1112223333 33444332212234689999999976
No 74
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ...
Probab=98.79 E-value=2.4e-08 Score=104.21 Aligned_cols=86 Identities=20% Similarity=0.279 Sum_probs=64.5
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHH----HHHhcC----CCHHHHHHHHHhcC
Q 006606 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHF----LMRSQS----MSVAQAIKKFAEVR 242 (639)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aY----Lm~~~g----~s~~eAi~~~~~~R 242 (639)
.+|++.+++...+..|+..+...-. ....+++|+|||.+|+||||++||++ +|+..+ +++.+++..+|+.|
T Consensus 185 WpD~gvP~~~~~~l~~l~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v~~lR~qR 263 (304)
T 2cm2_A 185 WPDFGVPESPASFLNFLFKVRESGS-LSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFR 263 (304)
T ss_dssp CCSSSCCSSSHHHHHHHHHHHHHTT-TSTTSBCEEEESSSSSSHHHHHHHHHHHHHHHHHSSCGGGCCHHHHHHHHTTTS
T ss_pred cCcCCCCCCHHHHHHHHHHHHHHhh-ccCCCCcEEEEcCcCCchhhHHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHhc
Confidence 4776444445667777766543211 12346899999999999999999875 566554 79999999999999
Q ss_pred CCccCCHHHHHHHHH
Q 006606 243 PPGIYKNEYIEALYT 257 (639)
Q Consensus 243 p~~i~~~~~l~~L~~ 257 (639)
+.++.+..|...++.
T Consensus 264 ~~~Vqt~~Qy~fiy~ 278 (304)
T 2cm2_A 264 MGLIQTADQLRFSYL 278 (304)
T ss_dssp TTCSCSHHHHHHHHH
T ss_pred ccccCCHHHHHHHHH
Confidence 999999988876654
No 75
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A
Probab=98.78 E-value=5.7e-08 Score=102.06 Aligned_cols=86 Identities=22% Similarity=0.181 Sum_probs=64.0
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCC
Q 006606 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPP 244 (639)
Q Consensus 170 p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~-----~g~s~~eAi~~~~~~Rp~ 244 (639)
..+|++.+++...+..|+..+.. .....+++|+|||.+|+||||++||++++.. ...++.+++..+|+.|+.
T Consensus 218 ~WPD~gvP~~~~~~l~~i~~~~~---~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~ 294 (320)
T 2h4v_A 218 QWPDMGVPEYALPVLTFVRRSSA---ARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNY 294 (320)
T ss_dssp CCCSSSSCSCSHHHHHHHHHHHH---TCCTTCCCEEEESSSSSHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTTTSTT
T ss_pred CCCcCCCCCCHHHHHHHHHHHHh---hccCCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhCcc
Confidence 45776444444455556554422 1123568999999999999999999887752 347999999999999999
Q ss_pred ccCCHHHHHHHHHH
Q 006606 245 GIYKNEYIEALYTF 258 (639)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (639)
.+.+..|...+++.
T Consensus 295 ~Vqt~~QY~Fiy~~ 308 (320)
T 2h4v_A 295 LVQTEEQYIFIHDA 308 (320)
T ss_dssp SSCSHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHH
Confidence 99999888877653
No 76
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.73 E-value=3.9e-08 Score=102.58 Aligned_cols=85 Identities=22% Similarity=0.326 Sum_probs=66.0
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHH----HHHhc----CCCHHHHHHHHHhcC
Q 006606 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHF----LMRSQ----SMSVAQAIKKFAEVR 242 (639)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aY----Lm~~~----g~s~~eAi~~~~~~R 242 (639)
.+|++.+++...+..|+..+.... ...+++|+|||.+|+||||++|+++ ++..+ .+++.+++..+|+.|
T Consensus 199 WpD~gvP~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfiaid~~~~~ll~~~~~~~vdv~~~v~~lR~qR 275 (303)
T 2oc3_A 199 WPDRGVPSSPDHMLAMVEEARRLQ---GSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQR 275 (303)
T ss_dssp CCSSSCCSCSHHHHHHHHHHHHHH---CSSCCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHHHHHTTS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHh---cCCCCcEEEEECCCCcceeEEEeHHHHHHHHHhcccCCCcCHHHHHHHHHhhc
Confidence 567654445667777776665432 2356899999999999999999998 66532 468999999999999
Q ss_pred CCccCCHHHHHHHHHH
Q 006606 243 PPGIYKNEYIEALYTF 258 (639)
Q Consensus 243 p~~i~~~~~l~~L~~~ 258 (639)
+..+.+..|...+++.
T Consensus 276 ~~~Vqt~~Qy~fiy~~ 291 (303)
T 2oc3_A 276 PAAVQTEEQYRFLYHT 291 (303)
T ss_dssp TTSSCSHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHH
Confidence 9999999988877653
No 77
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=98.72 E-value=1e-07 Score=99.48 Aligned_cols=142 Identities=15% Similarity=0.210 Sum_probs=96.0
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCC--------CCCCCcch----hh---------
Q 006606 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNT--------TRYYPTSD----LK--------- 160 (639)
Q Consensus 102 ~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~--------~~~y~~~~----~~--------- 160 (639)
..||+.-.||.++..+. ..++.+ .++..||-||.. ..|+..+. +.
T Consensus 113 ~~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kc~~YWP~~~~~~~~g~~~V~~~~~ 178 (307)
T 3s3e_A 113 REFIVTQGPLHSTRDDF--------WRMCWE------SNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILND 178 (307)
T ss_dssp TSEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECSCCCSCSSSSCEEETTEEEEEEEE
T ss_pred ceeEEecCCChhhHHHH--------HHHHHH------hCCcEEEEcCCcccCCcccccccCCCCCCCEEEeeEEEEEEEE
Confidence 36888888888766654 344443 578999999863 12332110 00
Q ss_pred ------------------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHH
Q 006606 161 ------------------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (639)
Q Consensus 161 ------------------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~a 221 (639)
..-|.++++ ..+|++.+++...+..|+..+.+.. ....++|+|||.+|+||||++||.
T Consensus 179 ~~~~~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~fi~~v~~~~---~~~~~PIvVHCsaGvGRTGtfiai 255 (307)
T 3s3e_A 179 SHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRI---GAEQRPIVVHCSAGVGRSGTFITL 255 (307)
T ss_dssp EECSSEEEEEEEEEETTEEEEEEEEEECCCCSSSCCSSTHHHHHHHHHHHHHH---CSCCSCEEEECSSSSHHHHHHHHH
T ss_pred EEeccEEEEEEEEecCCcceEEEEEEECCcccCCCCCChHHHHHHHHHHHHHh---cCCCCCEEEEcCCCchHHHHHHHH
Confidence 011233332 2467654445677777776665433 235679999999999999999998
Q ss_pred HHHHhc-----CCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHh
Q 006606 222 FLMRSQ-----SMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYH 260 (639)
Q Consensus 222 YLm~~~-----g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~ 260 (639)
..+..+ ..++.+++..+|+.|+.++.+..|...++....
T Consensus 256 d~~l~~l~~~~~vdv~~~V~~lR~qR~~mVqt~~QY~Fi~~~ll 299 (307)
T 3s3e_A 256 DRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLL 299 (307)
T ss_dssp HHHHHHTTTCSEECHHHHHHHHHHHSTTSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCHHHHHHHHHhhCCCCcCCHHHHHHHHHHHH
Confidence 877522 357999999999999999999999887765443
No 78
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Probab=98.71 E-value=1.1e-07 Score=106.66 Aligned_cols=93 Identities=19% Similarity=0.300 Sum_probs=70.2
Q ss_pred cEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh----cC----CCHHHH
Q 006606 164 IKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS----QS----MSVAQA 234 (639)
Q Consensus 164 I~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~----~g----~s~~eA 234 (639)
|.++++ ..+|++.+++...+..|+..+...... ...+++|+|||.+|+||||++||++++.. .| .++.++
T Consensus 409 V~h~~y~~Wpd~gvP~~~~~~l~~~~~v~~~~~~-~~~~~PivVHCsaG~GRTGtfia~d~~~~~l~~~~~~~~vdv~~~ 487 (532)
T 2b3o_A 409 IWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQES-LPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKT 487 (532)
T ss_dssp EEEEEECCCCSSSCCSSSHHHHHHHHHHHHHHHH-STTCCCEEEECSSSSSHHHHHHHHHHHHHHHHHSCTTSCCCHHHH
T ss_pred EEEecccCCCCCCCCCCHHHHHHHHHHHHHHHhh-cCCCCCEEEEcCCCCchhHHHHHHHHHHHHHHhcCCCCccCHHHH
Confidence 344433 356765444567788888877665432 23568999999999999999999876643 34 789999
Q ss_pred HHHHHhcCCCccCCHHHHHHHHH
Q 006606 235 IKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 235 i~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
+..+|+.|+.++.+..|...++.
T Consensus 488 v~~lR~qR~~~Vqt~~Qy~fiy~ 510 (532)
T 2b3o_A 488 IQMVRAQRSGMVQTEAQYKFIYV 510 (532)
T ss_dssp HHHHTTTSTTSSCSHHHHHHHHH
T ss_pred HHHHHhhCcccCCCHHHHHHHHH
Confidence 99999999999999988776654
No 79
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=98.71 E-value=6.6e-08 Score=109.98 Aligned_cols=92 Identities=21% Similarity=0.270 Sum_probs=70.5
Q ss_pred EEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh----c-CCCHHHHHHHH
Q 006606 165 KHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS----Q-SMSVAQAIKKF 238 (639)
Q Consensus 165 ~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~----~-g~s~~eAi~~~ 238 (639)
.++++ ..+|+|.+++...+..|+..+..... ...+++|+|||.+|+||||++||++++.. . ..++.+++..+
T Consensus 483 ~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~--~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~l 560 (599)
T 2jjd_A 483 RQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQ--QTGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSL 560 (599)
T ss_dssp EEEEECCSCSSSCCSCCHHHHHHHHHHHHHHH--HSTTCCEEEECSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHH
T ss_pred EEEEECCCCCCCCCCChHHHHHHHHHHHHHHh--ccCCCcEEEEeCCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 34433 45777655566778888877765433 23568999999999999999999877642 2 36899999999
Q ss_pred HhcCCCccCCHHHHHHHHHH
Q 006606 239 AEVRPPGIYKNEYIEALYTF 258 (639)
Q Consensus 239 ~~~Rp~~i~~~~~l~~L~~~ 258 (639)
|+.|+..+.+..|...+++.
T Consensus 561 R~qR~~mVqt~~QY~F~y~~ 580 (599)
T 2jjd_A 561 RLQRPHMVQTLEQYEFCYKV 580 (599)
T ss_dssp HTTSTTSSCSHHHHHHHHHH
T ss_pred HhhCccccCCHHHHHHHHHH
Confidence 99999999999988877654
No 80
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.70 E-value=1e-07 Score=107.97 Aligned_cols=140 Identities=19% Similarity=0.334 Sum_probs=98.1
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcch---h------------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---L------------ 159 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---~------------ 159 (639)
.||+.-.||.++..+. ..++.+ .++..||-||... .|+..+. +
T Consensus 376 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~~g~~~V~~~~~~~ 441 (575)
T 1lar_A 376 AYIATQGPLAESTEDF--------WRMLWE------HNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYN 441 (575)
T ss_dssp CEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEESSCCCSCSSSCEEETTEEEEEEEEEE
T ss_pred ceEEecCCCcchHHHH--------HHHHHh------cCCcEEEEccccccCCeecccccCCCCCCcceeeEEEEEEEEEE
Confidence 6888888888766554 344543 5789999998642 2332110 0
Q ss_pred -----------------hcCCcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHH
Q 006606 160 -----------------KKEGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (639)
Q Consensus 160 -----------------~~~gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~a 221 (639)
+...|.++++. .+|++.+++...+..|+..+...... ...+++|+|||.+|+||||++||+
T Consensus 442 ~~~~~~r~~~v~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~~~-~~~~~PivVHCsaGvGRTGtfiai 520 (575)
T 1lar_A 442 MPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQ-FGQDGPITVHCSAGVGRTGVFITL 520 (575)
T ss_dssp CSSEEEEEEEEEETTTTEEEEEEEEEECCSCSSSCCSSCHHHHHHHHHHHHHHHH-TTCCSCEEEESSSSSSHHHHHHHH
T ss_pred cCccEEEEEEEEecCCCCceEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhh-cCCCCcEEEEECCCCchHHHHHHH
Confidence 01224444433 57775555667788888777665432 235689999999999999999999
Q ss_pred HHHHh-----cCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 222 FLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 222 YLm~~-----~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
.++.. ...++.+++..+|+.|+..+.+..|...+++
T Consensus 521 d~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~f~y~ 561 (575)
T 1lar_A 521 SIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYR 561 (575)
T ss_dssp HHHHHHHHHHSEECHHHHHHHHTTTSTTSSCSHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHhhCchhcCCHHHHHHHHH
Confidence 87742 3468999999999999999999988877764
No 81
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=98.70 E-value=5.6e-08 Score=101.86 Aligned_cols=83 Identities=14% Similarity=0.240 Sum_probs=64.9
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH----h-cCCCHHHHHHHHHhcCCC
Q 006606 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----S-QSMSVAQAIKKFAEVRPP 244 (639)
Q Consensus 170 p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~----~-~g~s~~eAi~~~~~~Rp~ 244 (639)
..+|++.+++.+.+..|+..+.. ...+++|+|||.+|+||||++||++++. . ..+++.+++..+|+.|+.
T Consensus 213 ~WPD~gvP~~~~~ll~~i~~v~~-----~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~ 287 (315)
T 1wch_A 213 AWPDHDTPSQPDDLLTFISYMRH-----IHRSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRLQRHG 287 (315)
T ss_dssp SCCTTSCCSCHHHHHHHHHHHHH-----HCCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSTT
T ss_pred ecCCCCCCCCHHHHHHHHHHHHh-----hCCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCcc
Confidence 35777544456777777766543 2356899999999999999999988753 2 247999999999999999
Q ss_pred ccCCHHHHHHHHH
Q 006606 245 GIYKNEYIEALYT 257 (639)
Q Consensus 245 ~i~~~~~l~~L~~ 257 (639)
++.+..|...+++
T Consensus 288 ~Vqt~~Qy~Fiy~ 300 (315)
T 1wch_A 288 MVQTEDQYIFCYQ 300 (315)
T ss_dssp CSCSHHHHHHHHH
T ss_pred cCCCHHHHHHHHH
Confidence 9999988777654
No 82
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=98.69 E-value=6e-08 Score=101.09 Aligned_cols=83 Identities=17% Similarity=0.253 Sum_probs=64.9
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhc-------CCCHHHHHHHHHhcCC
Q 006606 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQ-------SMSVAQAIKKFAEVRP 243 (639)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~-------g~s~~eAi~~~~~~Rp 243 (639)
.+|++.+++...+..|+..+.. ...+++|+|||.+|+||||++||++++... ..++.+++..+|+.|+
T Consensus 194 Wpd~gvP~~~~~~l~~~~~v~~-----~~~~~PivVHCsaGvGRTGtfiai~~~~~~l~~~~~~~~~v~~~v~~lR~qR~ 268 (302)
T 4az1_A 194 WPDHGIPQSATSLEALLTNVKN-----SPTTVPVVVHCSAGIGRTGTLIGAYAALTHLERGTLTDTTVYDVVSAMRRQRF 268 (302)
T ss_dssp SCTTSCCSCHHHHHHHHHHHHH-----SCTTSCEEEESSSSSSHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHST
T ss_pred CCcCCccCCHHHHHHHHHHHHH-----hCCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhcCc
Confidence 4676444456777777655532 125689999999999999999999876643 3789999999999999
Q ss_pred CccCCHHHHHHHHHH
Q 006606 244 PGIYKNEYIEALYTF 258 (639)
Q Consensus 244 ~~i~~~~~l~~L~~~ 258 (639)
.++.+..|...++..
T Consensus 269 ~~Vqt~~QY~Fiy~~ 283 (302)
T 4az1_A 269 GMVQRMEQYFVIYLT 283 (302)
T ss_dssp TCSCSHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHH
Confidence 999999988877653
No 83
>1xk5_A Snurportin-1; protein-RNA-complex, transport protein; HET: TPG; 2.40A {Homo sapiens}
Probab=98.66 E-value=7.4e-07 Score=86.59 Aligned_cols=162 Identities=14% Similarity=0.145 Sum_probs=112.6
Q ss_pred cceeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCcCCcccc-cccCCCCeEeeEEEEEecCCCCCCceeEEEE
Q 006606 326 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGL-GEKTHHFTLLDGEMIIDKLPDSRRQERRYLI 404 (639)
Q Consensus 326 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~-~~~~~~~tlLDGElV~d~~~~~~~~~~~yli 404 (639)
.+|+|-.-.-|.|||+...++.+-+.+|+|... .+||..-...+. .......||||+....+ .-+|+|
T Consensus 21 ~~Wl~vp~P~GkRcLvva~~G~T~~~~k~G~~~---~~F~S~LPgG~~~~~~~~~~tILDCI~~e~--------~~tyYV 89 (204)
T 1xk5_A 21 QEWIVVVCPVGKRALIVASRGSTSAYTKSGYCV---NRFSSLLPGGNRRNSTAKDYTILDCIYNEV--------NQTYYV 89 (204)
T ss_dssp HHEEEEEEESSEEEEEEEETTEEEEECTTSCEE---EEECCSSSSSCSSSCCTTCCEEEEEEEEGG--------GTEEEE
T ss_pred CCeEEEECCCCcEEEEEecCCeEEEECCCCcEE---EEEcccCCCCCcccCCCCCCEEEEEEEecC--------CcEEEE
Confidence 589988999999999999999888999998621 234422111000 00023579999988743 236999
Q ss_pred eEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecceeechhHHHHHHHhcccccCC
Q 006606 405 YDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHD 484 (639)
Q Consensus 405 FDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~~~~~~~~l~~~~~~~l~h~ 484 (639)
.|+|+++|.++.+....=|.--|+.-+.+... ..+. ....++.+..-++++.+. +.|-+-+.......
T Consensus 90 LDvl~W~g~~l~dcetefRffWl~skl~E~~~--l~~~---------s~~n~~~f~~lp~~~c~~-~~l~~~~~~~~~~~ 157 (204)
T 1xk5_A 90 LDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEG--LGEK---------TKLNPFKFVGLKNFPCTP-ESLCDVLSMDFPFE 157 (204)
T ss_dssp EEEEEETTEECTTSCHHHHHHHHHHHTTTSTT--TTSC---------BTTBSSEEEECCEEECSH-HHHHHHHTCCCSSC
T ss_pred EEEEEECCceeecCcHHHHHHHHHHHhccccc--cccc---------cccCCcceEecccccCCH-HHHHHHHccCCCCC
Confidence 99999999999999999999999987654210 0001 124567788888888763 33333333356789
Q ss_pred CceEEEEeCCCCCccCCCCCeEEEec
Q 006606 485 ADGLVFQGWDDPYVPRTHEGLLKWKY 510 (639)
Q Consensus 485 ~DGLIf~p~~spY~~G~~~~llKWKp 510 (639)
.|||+|-.+++-|.+|++.-+.=+||
T Consensus 158 ~DGlLFyHK~a~Y~~G~TPLv~WLkp 183 (204)
T 1xk5_A 158 VDGLLFYHKQTHYSPGSTPLVGWLRP 183 (204)
T ss_dssp EEEEEEEESSCCCCSEEEEEEEEECG
T ss_pred cceEEEEeccccccCCCCChhhhcch
Confidence 99999999999999998754332343
No 84
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2
Probab=98.66 E-value=8.2e-08 Score=100.58 Aligned_cols=87 Identities=17% Similarity=0.203 Sum_probs=64.1
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH----h-cCCCHHHHHHHHHhcCCCc
Q 006606 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----S-QSMSVAQAIKKFAEVRPPG 245 (639)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~----~-~g~s~~eAi~~~~~~Rp~~ 245 (639)
.+|++.+++...+..|+..+...-. ....+++|+|||.+|+||||++||++++. . ..+++.+++..+|+.|+.+
T Consensus 180 WpD~gvP~~~~~~l~~l~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~ 258 (314)
T 1l8k_A 180 WPDFGVPESPASFLNFLFKVRESGS-LNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGL 258 (314)
T ss_dssp CCSSSCCSCSHHHHHHHHHHHHTTT-TSTTSCCEEEEESSSSSHHHHHHHHHHHHHHSSSSCCCCHHHHHHHHTTTBTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhh-ccCCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcccc
Confidence 4676444455667777665543210 11246899999999999999999986542 2 2479999999999999999
Q ss_pred cCCHHHHHHHHHH
Q 006606 246 IYKNEYIEALYTF 258 (639)
Q Consensus 246 i~~~~~l~~L~~~ 258 (639)
+.+..|...++..
T Consensus 259 Vqt~~Qy~fiy~a 271 (314)
T 1l8k_A 259 IQTPDQLRFSYMA 271 (314)
T ss_dssp SCSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999988877654
No 85
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Probab=98.65 E-value=5.8e-08 Score=101.15 Aligned_cols=84 Identities=19% Similarity=0.329 Sum_probs=63.9
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH----h--cCCCHHHHHHHHHhcCCC
Q 006606 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----S--QSMSVAQAIKKFAEVRPP 244 (639)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~----~--~g~s~~eAi~~~~~~Rp~ 244 (639)
.+|++.+++...+..|+..+.... ...+++|+|||.+|+||||++||++++- . ..+++.+++..+|+.|+.
T Consensus 197 WPD~gvP~~~~~ll~~~~~v~~~~---~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~vdv~~~v~~lR~qR~~ 273 (301)
T 2i1y_A 197 WPAEGTPASTRPLLDFRRKVNKCY---RGRSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGVKEIDIAATLEHVRDQRPG 273 (301)
T ss_dssp CCSSSBCSCSHHHHHHHHHHHHSC---CCSSCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHTTSTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHh---CCCCCCEEEEECCCCchhHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCcc
Confidence 567654445666777776654321 2356899999999999999999987653 1 137999999999999999
Q ss_pred ccCCHHHHHHHHH
Q 006606 245 GIYKNEYIEALYT 257 (639)
Q Consensus 245 ~i~~~~~l~~L~~ 257 (639)
++.+..|...++.
T Consensus 274 ~Vqt~~QY~Fiy~ 286 (301)
T 2i1y_A 274 LVRSKDQFEFALT 286 (301)
T ss_dssp CSCSHHHHHHHHH
T ss_pred ccCCHHHHHHHHH
Confidence 9999988776654
No 86
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1
Probab=98.65 E-value=2e-07 Score=104.44 Aligned_cols=87 Identities=21% Similarity=0.300 Sum_probs=68.1
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH----hcC----CCHHHHHHHHHhcC
Q 006606 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----SQS----MSVAQAIKKFAEVR 242 (639)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~----~~g----~s~~eAi~~~~~~R 242 (639)
.+|++.+++...+..|+..+...... ...+++|+|||.+|+||||++||+.++. ..| .++.+++..+|+.|
T Consensus 423 WPD~gvP~~~~~~l~~~~~v~~~~~~-~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v~~lR~qR 501 (525)
T 2shp_A 423 WPDHGVPSDPGGVLDFLEEVHHKQES-IMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQR 501 (525)
T ss_dssp CCSSSCCSCHHHHHHHHHHHHHHHHH-STTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCTTSEECHHHHHHHHHTTS
T ss_pred CCCCCcccChHHHHHHHHHHHHHHhc-cCCCCCEEEEcCCCCchhHHHHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHhC
Confidence 56775555678888888877654332 2356899999999999999999986652 334 68999999999999
Q ss_pred CCccCCHHHHHHHHHH
Q 006606 243 PPGIYKNEYIEALYTF 258 (639)
Q Consensus 243 p~~i~~~~~l~~L~~~ 258 (639)
+.++.+..|...+++.
T Consensus 502 ~~~Vqt~~QY~fiy~~ 517 (525)
T 2shp_A 502 SGMVQTEAQYRSIYMA 517 (525)
T ss_dssp TTSSCCHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHH
Confidence 9999999988777653
No 87
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=98.62 E-value=1.2e-07 Score=99.06 Aligned_cols=86 Identities=19% Similarity=0.213 Sum_probs=64.7
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH----h-cCCC--HHHHHHHHHhcC
Q 006606 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----S-QSMS--VAQAIKKFAEVR 242 (639)
Q Consensus 170 p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~----~-~g~s--~~eAi~~~~~~R 242 (639)
..+|++.+++...+..|+..+.. ...+++|+|||.+|+||||++||++++. . ...+ +.+++..+|+.|
T Consensus 196 ~WpD~gvP~~~~~~l~~~~~v~~-----~~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~~d~~v~~~v~~lR~qR 270 (306)
T 3m4u_A 196 GWPDHGVPESAASFDELLSVIKN-----CVTTSPILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAMKQKR 270 (306)
T ss_dssp SCCTTSCCSCHHHHHHHHHHHHT-----CCCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHh-----hCCCCCEEEEcCCCCcchheeehHHHHHHHHHcCCCcchHHHHHHHHHHhcC
Confidence 35676444466666666654422 2346899999999999999999988874 2 2346 889999999999
Q ss_pred CCccCCHHHHHHHHHHHh
Q 006606 243 PPGIYKNEYIEALYTFYH 260 (639)
Q Consensus 243 p~~i~~~~~l~~L~~~y~ 260 (639)
+.++.+..|...+++.-.
T Consensus 271 ~~~Vqt~~Qy~fiy~~ll 288 (306)
T 3m4u_A 271 FGMVQRLEQYAVIYMTVL 288 (306)
T ss_dssp TTSSCSHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHH
Confidence 999999999888876433
No 88
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.61 E-value=3.5e-07 Score=103.51 Aligned_cols=139 Identities=18% Similarity=0.296 Sum_probs=96.0
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcch----------------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (639)
+||+...||.++..+. ..++.+ .++..||-||... .|+..+.
T Consensus 87 ~yIatQgPl~~T~~dF--------W~Mvwe------~~~~~IVmlt~~~E~~~~kc~~YwP~~~~~~~g~~~V~~~~~~~ 152 (575)
T 1lar_A 87 AYIATQGPLPETMGDF--------WRMVWE------QRTATVVMMTRLEEKSRVKCDQYWPARGTETCGLIQVTLLDTVE 152 (575)
T ss_dssp EEEEECCCCTTTHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCSSSEEEETTEEEEEEEEEE
T ss_pred eeEecCCCCcchHHHH--------HHHHhh------cCCCEEEEcccceeCCccccccccCCCCCceeeeEEEEEEEEEe
Confidence 5888888887766553 344543 5789999998641 2332110
Q ss_pred ----------h------hcCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHH
Q 006606 159 ----------L------KKEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (639)
Q Consensus 159 ----------~------~~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~a 221 (639)
+ +...|.|+++ ..+|+|.+++...+..|+..+... ....+++|+|||.+|+||||++|++
T Consensus 153 ~~~~~~r~l~l~~~~~~~~r~V~h~~y~~WpD~gvP~~~~~~l~~~~~v~~~---~~~~~~pivVHCsaGvGRTGtfiai 229 (575)
T 1lar_A 153 LATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKAC---NPLDAGPMVVHCSAGVGRTGCFIVI 229 (575)
T ss_dssp CSSEEEEEEEEEETTSCCEEEEEEEEECCSCSSSCCSCSHHHHHHHHHHHHH---SCTTCCCEEEESSSSSSHHHHHHHH
T ss_pred cCCeEEEEEeeecCCCCccEEEEEEEeCCCCCCCcccCHHHHHHHHHHHHHh---cCCCCCCEEEEecCCCcceeEEEEh
Confidence 0 0112444444 357875555567777777766442 1235689999999999999999998
Q ss_pred HHHH-----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006606 222 FLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (639)
Q Consensus 222 YLm~-----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (639)
.++. ....++.+++..+|+.|+.++.+..|...+++.
T Consensus 230 d~~l~~l~~~~~v~i~~~v~~lR~qR~~~Vqt~~Qy~fi~~~ 271 (575)
T 1lar_A 230 DAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEA 271 (575)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHTTSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCHHHHHHHHHhhhhccCCCHHHHHHhHHH
Confidence 7664 234789999999999999999998887776553
No 89
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}
Probab=98.61 E-value=2.5e-07 Score=105.11 Aligned_cols=86 Identities=17% Similarity=0.261 Sum_probs=67.4
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH----hcC----CCHHHHHHHHHhcC
Q 006606 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----SQS----MSVAQAIKKFAEVR 242 (639)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~----~~g----~s~~eAi~~~~~~R 242 (639)
.+|++.+++...+..|+..+...... ....++|+|||.+|+||||++||+.++. ..| +++.+++..+|..|
T Consensus 417 WPD~gvP~~~~~~l~fl~~v~~~~~~-~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~V~~lR~qR 495 (595)
T 3ps5_A 417 WPDHGVPSEPGGVLSFLDQINQRQES-LPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQR 495 (595)
T ss_dssp CCSSSSCSCSHHHHHHHHHHHHHHHH-CTTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCSSCEECHHHHHHHHHTTS
T ss_pred cccCCccCCHHHHHHHHHHHHHHHhh-cCCCCCEEEEcCCCCchHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHhhc
Confidence 56775554667788888887665432 2356899999999999999999986652 234 68999999999999
Q ss_pred CCccCCHHHHHHHHH
Q 006606 243 PPGIYKNEYIEALYT 257 (639)
Q Consensus 243 p~~i~~~~~l~~L~~ 257 (639)
+.++.+..|...++.
T Consensus 496 ~~mVqt~~QY~Fiy~ 510 (595)
T 3ps5_A 496 SGMVQTEAQYKFIYV 510 (595)
T ss_dssp TTSSCSHHHHHHHHH
T ss_pred ccccCCHHHHHHHHH
Confidence 999999988776654
No 90
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=98.59 E-value=1.9e-07 Score=106.43 Aligned_cols=145 Identities=19% Similarity=0.347 Sum_probs=97.4
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcch----------------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (639)
.||+.-.||.++..+. ..++.+ .++..||-||... .|+....
T Consensus 408 ~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kc~~Ywp~~~~~~g~~~V~~~~~~~~ 473 (610)
T 1ygr_A 408 VMIAAQGPLKETIGDF--------WQMIFQ------RKVKVIVMLTELKHGDQEICAQYWGEGKQTYGDIEVDLKDTDKS 473 (610)
T ss_dssp EEEEEECCCTTTHHHH--------HHHHHH------TTCCEEEECSCSEETTEESSCCCCCSSCCEETTEECCEEEEEEC
T ss_pred cEEEeCCCChhhHHHH--------HHHHHH------cCcCeEEeccccccCCceeccccCCCCCcEeeeEEEEEEEEEec
Confidence 5888888887765554 344543 5799999998641 2332110
Q ss_pred ---------hh------cCCcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHh-------cccCCCeEEEEcCCCCChh
Q 006606 159 ---------LK------KEGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSR-------QKHSKKYILVHCTHGHNRT 215 (639)
Q Consensus 159 ---------~~------~~gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~-------~~~~~~~VlVHC~~G~~RT 215 (639)
+. ...|.|+++. .+|++.+++...+..|+..+.+.... ....+++|+|||.+|+|||
T Consensus 474 ~~~~~r~l~l~~~~~~~~r~V~h~~y~~WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRT 553 (610)
T 1ygr_A 474 STYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLIHCRDGSQQT 553 (610)
T ss_dssp SSEEEEEEEEBCSSCSCCEEEEEEEECSCCSSSCCSCHHHHHHHHHHHHTTSCCCC-------CCCCCEEEEESSSSTTH
T ss_pred CCeEEEEEEEEECCCCCcEEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCCCEEEEeCCCCcch
Confidence 00 0124455543 57775555677777777665432210 0124689999999999999
Q ss_pred HHHHHHHHHHh-----cCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhh
Q 006606 216 GYMIVHFLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE 261 (639)
Q Consensus 216 G~li~aYLm~~-----~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~ 261 (639)
|++||++++.. ...++.+++..+|+.|+.++.+..|...+++.-..
T Consensus 554 Gtf~ai~~~l~~~~~~~~vdv~~~V~~lR~qR~~~Vqt~~QY~F~y~~~~~ 604 (610)
T 1ygr_A 554 GIFCALLNLLESAETEEVVDIFQVVKALRKARLGMVSTFEQYQFLYDVIAS 604 (610)
T ss_dssp HHHHHHHHHHHHHHHSSBCCHHHHHHHHHHHSTTTTCSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhCCccCHHHHHHHHHHhCccccCCHHHHHHHHHHHHH
Confidence 99999887642 23689999999999999999999998888765433
No 91
>2vug_A PAB1020; RNA, ligase, AMPPNP, nucleotidyl- transferase; HET: ANP; 2.9A {Pyrococcus abyssi GE5}
Probab=98.58 E-value=7.6e-07 Score=95.58 Aligned_cols=161 Identities=17% Similarity=0.228 Sum_probs=98.0
Q ss_pred CCCCCccc-cccchhhhhhhcccceeeeecCceeEEEEEEECCEEEEEeCCCcc--ccccCcCCCcCCcccccccCCCCe
Q 006606 305 MQFPGSHP-VSLNSDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNF--RRVQMRFPCRNSNEGLGEKTHHFT 381 (639)
Q Consensus 305 ~~FPGsqP-Vsl~r~~l~~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~--~~v~~~FP~~~~~~~~~~~~~~~t 381 (639)
.+||--.| .|++...-..+....|+|++|.||.|+.++..++.+.+.+|++.. ...+ .||.... ..+.. .....
T Consensus 73 ~~fpkv~~mlsL~~~~~~~~~~~~~vvEeKlDG~~v~l~y~~G~v~a~TRg~g~e~iT~n-~i~~wip-~~L~~-~~~~l 149 (389)
T 2vug_A 73 PGFPHIKRIINLRSGIRRIFKRGEFYVEEKVDGYNVRVVMYKGKMLGITRGGFICPFTTE-RIPDFVP-QEFFK-DNPNL 149 (389)
T ss_dssp CCCCCCEEESSSHHHHHHHSSSCEEEEEEECCSEEEEEEEETTEEEEEETTSCBCHHHHH-HGGGTSC-THHHH-HCTTE
T ss_pred cCCCCcccccCchhhhhhhccCCeEEEEEeecCcEEEEEEECCEEEEEeCCCCCCCCchh-hhhHhHH-HHHhc-CCCcE
Confidence 46775444 355544111222357999999999999998888888899999875 1112 3443111 11110 14569
Q ss_pred EeeEEEEEecCC----C--CCCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCC
Q 006606 382 LLDGEMIIDKLP----D--SRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLE 455 (639)
Q Consensus 382 lLDGElV~d~~~----~--~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~ 455 (639)
+||||++.-..+ + .+..++.|++||++..++... .|+.+|++.|++.-... .|.
T Consensus 150 ~L~GEvv~~~~~f~~~n~~np~r~l~F~vFDV~~~~~g~~--~s~~er~~~L~~lG~~~------------vp~------ 209 (389)
T 2vug_A 150 ILVGEMAGPESPYLVEGPPYVKEDIQFFLFDVQEIKTGRS--LPVEERLKIAEEYGINH------------VEV------ 209 (389)
T ss_dssp EEEEEEESSSCSSCSCCCTTCCSSCEEEEEEEEETTTCCB--CCHHHHHHHHHHHTCCB------------CCE------
T ss_pred EEEEEEEecCChHHHhcccCcccCCEEEEEEeeccCCCCc--CCHHHHHHHHHHcCCCC------------CCe------
Confidence 999999875421 1 012468999999988763332 78999999999853211 111
Q ss_pred CcEEEecceeechhHHHHHHHhcccccCCCceEEEEeCC
Q 006606 456 PFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWD 494 (639)
Q Consensus 456 pf~I~~K~~~~~~~~~~l~~~~~~~l~h~~DGLIf~p~~ 494 (639)
+.....-.+..+..+++.+ ..++.||||++..+
T Consensus 210 ---~~~~~~~~~eel~~~i~~~---~~~~~EGvViK~~d 242 (389)
T 2vug_A 210 ---FGKYTKDDVDELYQLIERL---SKEGREGIIMKSPD 242 (389)
T ss_dssp ---EEEEEGGGHHHHHHHHHHH---HHTTCCEEEEECTT
T ss_pred ---EEEEcCCCHHHHHHHHHHh---cCCCCCeEEEEECC
Confidence 1111110123445555544 36899999999976
No 92
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=98.57 E-value=3.8e-07 Score=103.74 Aligned_cols=138 Identities=22% Similarity=0.330 Sum_probs=93.6
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcch----------------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (639)
+||+...||.++..+. ..++.+ .++..||-||... +|+..+.
T Consensus 98 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kc~~YwP~~~~~~~g~~~v~~~~~~~ 163 (599)
T 2jjd_A 98 KFIAAQGPKQETVNDF--------WRMVWE------QKSATIVMLTNLKERKEEKCHQYWPDQGCWTYGNIRVCVEDCVV 163 (599)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECSCCCSCSSSEEEETTEEEEEEEEEE
T ss_pred eeEEcCCCChhhHHHH--------HHHHcc------CCCCEEEEcccceeCCeEhhhhhCCCCCCceeccEEEEEEEEEE
Confidence 6888888988766654 344543 5788899998642 2332110
Q ss_pred --------h--h---------cCCcEEEE-eeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 159 --------L--K---------KEGIKHVK-IQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 159 --------~--~---------~~gI~y~~-ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
+ . ..-|.+++ ...+|++.+++...+..|+..+... ....+++|+|||.+|+||||++
T Consensus 164 ~~~~~~r~~~v~~~~~~~~~~~r~v~h~~y~~WpD~gvP~~~~~~l~~~~~v~~~---~~~~~~PivVHCsaGvGRTGtf 240 (599)
T 2jjd_A 164 LVDYTIRKFCIQPQLPDGCKAPRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTL---NPVHAGPIVVHCSAGVGRTGTF 240 (599)
T ss_dssp CSSEEEEEEEEBC------CCCEEEEEEEECCCCSSSCCSCSHHHHHHHHHHHHH---SCTTCCCEEEECSSSSSHHHHH
T ss_pred ecceEEEEEEEEEeccCCCCcceEEEEEEeCCCCCCCCCCChHHHHHHHHHHHhh---ccCCCceEEEEeCCCCcccchh
Confidence 0 0 00122333 2356765444667788887766542 1234689999999999999999
Q ss_pred HHHHHH-----HhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 219 IVHFLM-----RSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 219 i~aYLm-----~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
||...+ ....+++.+++..+|+.|+..+.+..|...+++
T Consensus 241 iaid~~l~~l~~~~~v~v~~~v~~lR~qR~~~Vqt~~Qy~f~y~ 284 (599)
T 2jjd_A 241 IVIDAMMAMMHAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQ 284 (599)
T ss_dssp HHHHHHHHHHHHHSEECHHHHHHHHHTTSTTCSCCHHHHHHHHH
T ss_pred hHHHHHHHHHhccCCcCHHHHHHHHHHhhhccccchHHheeeee
Confidence 975333 344679999999999999999999988776654
No 93
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=98.54 E-value=1.1e-07 Score=98.68 Aligned_cols=112 Identities=14% Similarity=0.236 Sum_probs=70.2
Q ss_pred CCHHHHHHHHHHcCCCceEEEEcCCCCC--CCCcchhhcCCcEEEEeeccCCCC------CCCHH---------------
Q 006606 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTR--YYPTSDLKKEGIKHVKIQCKGRDA------VPDNA--------------- 181 (639)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~--~y~~~~~~~~gI~y~~ip~~d~~~------~P~~~--------------- 181 (639)
.++.++- .++. .+|++||||..... .+.+. ....||+|+++|+.+... .|...
T Consensus 56 lt~~d~~-~L~~--lGI~tVIDLR~~~E~~~~~pd-~~~~Gi~~~~iPi~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~ 131 (296)
T 1ywf_A 56 LDDAGRA-TLRR--LGITDVADLRSSREVARRGPG-RVPDGIDVHLLPFPDLADDDADDSAPHETAFKRLLTNDGSNGES 131 (296)
T ss_dssp CCHHHHH-HHHH--HTCCEEEECCCHHHHHHHCSC-CCCTTCEEEECCCCCSCC--------------------------
T ss_pred CCHHHHH-HHHh--CCCCEEEECcChhhhhccCCC-CCCCCCEEEEecCccccccccccccchhhHHHHHhhhccccccc
Confidence 4566643 3443 46999999985421 11011 234699999999976421 01000
Q ss_pred ---------HHHHHH--------------HHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHH
Q 006606 182 ---------SVNNFV--------------YEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKF 238 (639)
Q Consensus 182 ---------~i~~f~--------------~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s~~eAi~~~ 238 (639)
....++ ..+..+++.... +++|+|||++|.+|||++++++|.. .||+.+++++-+
T Consensus 132 ~~~~~~~~~~~~~~m~~~Y~~~~~~~~~~~~~~~~l~~l~~-~~pvl~HC~aGkDRTG~~~alll~~-~g~~~~~I~~DY 209 (296)
T 1ywf_A 132 GESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVVTLLAA-GRPVLTHCFAGKDRTGFVVALVLEA-VGLDRDVIVADY 209 (296)
T ss_dssp -----CCCHHHHHHHHHHHHHGGGSTTHHHHHHHHHHHHHT-TCCEEEECSSSSSHHHHHHHHHHHH-TTCCHHHHHHHH
T ss_pred chhhhcccchHHHHHHHHHHHHHhcchhHHHHHHHHHHhcc-CCCEEEECCCCCccccHHHHHHHHH-cCCCHHHHHHHH
Confidence 000110 123334443333 7899999999999999999998887 799999999877
Q ss_pred HhcC
Q 006606 239 AEVR 242 (639)
Q Consensus 239 ~~~R 242 (639)
....
T Consensus 210 ~~Tn 213 (296)
T 1ywf_A 210 LRSN 213 (296)
T ss_dssp HGGG
T ss_pred HHHH
Confidence 6553
No 94
>3gjx_B Snurportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Homo sapiens} PDB: 3nby_B* 3nbz_B* 3nc0_B* 3gb8_B 2qna_B
Probab=98.51 E-value=2e-06 Score=89.22 Aligned_cols=164 Identities=15% Similarity=0.199 Sum_probs=113.3
Q ss_pred cceeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCcCCccccc-ccCCCCeEeeEEEEEecCCCCCCceeEEEE
Q 006606 326 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLG-EKTHHFTLLDGEMIIDKLPDSRRQERRYLI 404 (639)
Q Consensus 326 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~-~~~~~~tlLDGElV~d~~~~~~~~~~~yli 404 (639)
.+|+|..=.-|.|||++...+.+-+++|+|... ..||..-...+.. ......||||+...-. .-+|+|
T Consensus 122 ~~W~~vpcPvGkRcLVVas~G~T~aysk~G~~l---~~F~S~LPGG~~~~s~~~~~TILDCIy~e~--------~~tyYV 190 (365)
T 3gjx_B 122 QEWIVVVCPVGKRALIVASRGSTSAYTKSGYCV---NRFSSLLPGGNRRNSTAKDYTILDCIYNEV--------NQTYYV 190 (365)
T ss_dssp HHEEEEEEESSEEEEEEEETTEEEEECTTCCEE---EEECCSSTTTCC----CCCCEEEEEEEETT--------TTEEEE
T ss_pred cCeeEEeccCCcEEEEEecCceEEEECCCCCEE---eeeCCCCCCCCccccCCCCCEEEEEEeecC--------CceEEE
Confidence 478888888999999999999888999998521 2344321110000 0023579999987632 236999
Q ss_pred eEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecceeechhHHHHHHHhcccccCC
Q 006606 405 YDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHD 484 (639)
Q Consensus 405 FDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~~~~~~~~l~~~~~~~l~h~ 484 (639)
.|||+|+|.++.+.+..-|.--|..-+.+... +.+ . ....||.+..-+.|+.+. +.|-+.+....++.
T Consensus 191 LDVL~W~g~~l~dCeteFRffWl~SKL~E~~~-----l~e-~-----s~~np~~Fv~lp~~~C~~-esL~~~ls~~~pfe 258 (365)
T 3gjx_B 191 LDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEG-----LGE-K-----TKLNPFKFVGLKNFPCTP-ESLCDVLSMDFPFE 258 (365)
T ss_dssp EEEEEETTEECTTSCHHHHHHHHHHHGGGSTT-----TTS-C-----CSSCCSEEEECCEEECCH-HHHHHHTTCCCSSC
T ss_pred EEEeeeCCcccccCchHHHHHHHHHHhhhccc-----ccc-c-----ccCCCCceeccCCCCcCH-HHHHHHhccCCCCc
Confidence 99999999999999999999999887644210 100 0 123577777778888754 33444444567789
Q ss_pred CceEEEEeCCCCCccCCCCCeEEEecCCC
Q 006606 485 ADGLVFQGWDDPYVPRTHEGLLKWKYARM 513 (639)
Q Consensus 485 ~DGLIf~p~~spY~~G~~~~llKWKp~~~ 513 (639)
.|||+|-...+-|.+|.+.- .=|--|.|
T Consensus 259 ~DGLLFYHK~ahY~~G~TPL-VgWLkPyM 286 (365)
T 3gjx_B 259 VDGLLFYHKQTHYSPGSTPL-VGWLRPYM 286 (365)
T ss_dssp EEEEEEEETTCCCCSEEEEE-EEEECHHH
T ss_pred cceEEEEeccccccCCCCcc-ceecchhh
Confidence 99999999999999998754 34543333
No 95
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=98.50 E-value=3.7e-07 Score=104.09 Aligned_cols=138 Identities=18% Similarity=0.233 Sum_probs=92.3
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcch----------------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (639)
+||+.-.||.++..+. ..++.+ .++..||-||... .|+....
T Consensus 98 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~~ 163 (610)
T 1ygr_A 98 KYIAAQGPRDETVDDF--------WRMIWE------QKATVIVMVTRCEEGNRNKCAEYWPSMEEGTRAFGDVVVKINQH 163 (610)
T ss_dssp CEEEECCCCTTTHHHH--------HHHHHH------TTCCEEEECSCSEETTEESCCCCSCCTTTCEEEETTEEEEEEEE
T ss_pred eEEEeCCCchhHHHHH--------HHHHhc------ccCcEEEeCCccccCCccccceecccCCCCceeeccEEEEEEEE
Confidence 6888888887766554 344543 5789999998641 2443110
Q ss_pred ----------h--h-------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006606 159 ----------L--K-------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (639)
Q Consensus 159 ----------~--~-------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~l 218 (639)
+ . ...|.|+++ ..+|++.+++...+..|+..+..+ ....+++|+|||.+|+||||++
T Consensus 164 ~~~~~~~~r~l~l~~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~~~~v~~~---~~~~~~PivVHCsaGvGRTGtf 240 (610)
T 1ygr_A 164 KRCPDYIIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAF---SNFFSGPIVVHSSAGVGRTGTY 240 (610)
T ss_dssp EECSSEEEEEEEEEESSSCCCCEEEEEEEECSCCTTSCCSCHHHHHHHHHHHTTS---CCTTCCCEEEECSSSSHHHHHH
T ss_pred EecCCcEEEEEEEEeccCCCCCcEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHh---hccCCCCeEEEcCCCCCchhhH
Confidence 0 0 012334433 357775444555666655443221 1124689999999999999999
Q ss_pred HHHHHHH-----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 219 IVHFLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 219 i~aYLm~-----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
||+.++. ...+++.+++..+|+.|+..+.+..|...+++
T Consensus 241 iaid~~l~~l~~~~~v~v~~~v~~lR~qR~~~Vqt~~Qy~fi~~ 284 (610)
T 1ygr_A 241 IGIDAMLEGLEAENKVDVYGYVVKLRRQRCLMVQVEAQYILIHQ 284 (610)
T ss_dssp HHHHHHHHTHHHHSEECHHHHHHHHHTTSTTSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHhhhcCCcCcHHHHHHHHH
Confidence 9998774 23579999999999999999999887776654
No 96
>4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens}
Probab=98.46 E-value=4.7e-07 Score=96.35 Aligned_cols=86 Identities=19% Similarity=0.241 Sum_probs=63.3
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHH----Hh----cCCCHHHHHHHHHhcC
Q 006606 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLM----RS----QSMSVAQAIKKFAEVR 242 (639)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm----~~----~g~s~~eAi~~~~~~R 242 (639)
.+|++.+++...+..|+..+.+... ....+++|+|||.+|+||||++||+.++ .. ...++.+++..+|+.|
T Consensus 213 WPD~gvP~~~~~~l~~l~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~V~~lR~qR 291 (354)
T 4i8n_A 213 WPDFGVPESPASFLNFLFKVRESGS-LSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFR 291 (354)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHTTT-TCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHTTS
T ss_pred cccCCccCCHHHHHHHHHHHHHHhh-ccCCCCCEEEEeCCCcchHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhC
Confidence 4676544466677777766544211 1224679999999999999999987643 21 2478999999999999
Q ss_pred CCccCCHHHHHHHHH
Q 006606 243 PPGIYKNEYIEALYT 257 (639)
Q Consensus 243 p~~i~~~~~l~~L~~ 257 (639)
+..+.+..|...++.
T Consensus 292 ~~mVqt~~QY~F~Y~ 306 (354)
T 4i8n_A 292 MGLIQTADQLRFSYL 306 (354)
T ss_dssp TTCSCSHHHHHHHHH
T ss_pred cccccCHHHHHHHHH
Confidence 999999988776654
No 97
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A
Probab=98.42 E-value=8.7e-07 Score=92.44 Aligned_cols=62 Identities=21% Similarity=0.293 Sum_probs=53.6
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHhc---CCCHHHHHHHHHhcCCC-ccCCHHHHHHHHHHHhhc
Q 006606 201 KKYILVHCTHGHNRTGYMIVHFLMRSQ---SMSVAQAIKKFAEVRPP-GIYKNEYIEALYTFYHEK 262 (639)
Q Consensus 201 ~~~VlVHC~~G~~RTG~li~aYLm~~~---g~s~~eAi~~~~~~Rp~-~i~~~~~l~~L~~~y~~~ 262 (639)
.++++|||.+|+||||++||+.++... .+++.+++..+|+.|+. .+.+..|...+++.-.+.
T Consensus 234 ~~piVVHCSAGvGRTGtfiaid~ll~~~~~~vdv~~~V~~lR~qR~~~mVQt~~QY~fiy~~~~~~ 299 (306)
T 1lyv_A 234 KLRPVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAEGQ 299 (306)
T ss_dssp SSCCEEECSSSSSHHHHHHHHHHHTCGGGTTCCHHHHHHHHHHHTCTTSSCSHHHHHHHHHHHHHH
T ss_pred CCCcEEEcCCCCchhHHHHHHHHHHHhhcCCCCHHHHHHHHHhcCCcCcCCCHHHHHHHHHHHHHh
Confidence 457899999999999999998877543 67999999999999999 999999998888765543
No 98
>4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A*
Probab=98.37 E-value=1.5e-06 Score=91.04 Aligned_cols=141 Identities=21% Similarity=0.293 Sum_probs=94.3
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCC--------CCCCcc---h--hh---------
Q 006606 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS---D--LK--------- 160 (639)
Q Consensus 103 ~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~---~--~~--------- 160 (639)
.||+.-.||.++..+. ..++.+ .++..||-||... .|+..+ . +.
T Consensus 96 ~yIaTQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kC~~YwP~~~~~~~~~g~~~V~~~~~ 161 (314)
T 4ge6_A 96 AYIGTQGPLENTYRDF--------WLMVWE------QKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGV 161 (314)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCCSTTCEEEETTEEEEEEEE
T ss_pred eEEEECCCcHHHHHHH--------HHHHHh------cCCceEEEcccccccceecccccCcCCCCCceecccEEEEEEEE
Confidence 5888888988877664 345554 5789999998532 233210 0 00
Q ss_pred --------------------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHh----------cccCCCeEEEEcC
Q 006606 161 --------------------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSR----------QKHSKKYILVHCT 209 (639)
Q Consensus 161 --------------------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~----------~~~~~~~VlVHC~ 209 (639)
..-|.++++ ..+|++.+++...+..|+..+.+.-.. .....++|+|||.
T Consensus 162 ~~~~~~~~r~l~~~~~~~~~~r~V~h~~y~~WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCS 241 (314)
T 4ge6_A 162 ENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCS 241 (314)
T ss_dssp EECSSEEEEEEEEEETTTTEEEEEEEEEECCSCSSSCCSCSHHHHHHHHHHHHHHHHHHHHSCCC----CCSCCEEEECS
T ss_pred EEcCCceEEEEeeecccCCcceEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhhhhccccccccccCCCCCEEEECC
Confidence 011233332 356775555677788888776543221 1123569999999
Q ss_pred CCCChhHHHHHHHHHH-----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006606 210 HGHNRTGYMIVHFLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (639)
Q Consensus 210 ~G~~RTG~li~aYLm~-----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (639)
+|+||||++||...+- ....++.+++..+|+.|+..+.+..|...+++
T Consensus 242 aGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~lR~qR~~mVqt~~QY~Fiy~ 294 (314)
T 4ge6_A 242 AGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYK 294 (314)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHSCBCHHHHHHHHTTTSTTCSCSHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhhcccccCCHHHHHHHHH
Confidence 9999999999875542 23469999999999999999999998876654
No 99
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=98.34 E-value=2.8e-06 Score=97.12 Aligned_cols=85 Identities=22% Similarity=0.192 Sum_probs=62.7
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH-----hcCCCHHHHHHHHHhcCCC
Q 006606 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR-----SQSMSVAQAIKKFAEVRPP 244 (639)
Q Consensus 170 p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~-----~~g~s~~eAi~~~~~~Rp~ 244 (639)
..+|+|.+++...+..|+..+.. .....+++|+|||.+|+||||++|++.++. ...+++.+++..+|+.|+.
T Consensus 200 ~WPD~gvP~~~~~ll~~i~~~~~---~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~v~~~v~~lR~qR~~ 276 (627)
T 2nlk_A 200 QWPDMGVPEYALPVLTFVRRSSA---ARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNY 276 (627)
T ss_dssp CCCSSSSCSCSHHHHHHHHHHHH---TCCSSCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHTTTSTT
T ss_pred CCCCCCCCcChHHHHHHHHHHHh---hccCCCceEEEEcCCCCCCccEEEEHHHHHHHHHhCCCCCHHHHHHHHHhhCCC
Confidence 35677544455555555544322 112356899999999999999999887663 2346999999999999999
Q ss_pred ccCCHHHHHHHHH
Q 006606 245 GIYKNEYIEALYT 257 (639)
Q Consensus 245 ~i~~~~~l~~L~~ 257 (639)
.+.+..|...+++
T Consensus 277 ~Vqt~~Qy~fiy~ 289 (627)
T 2nlk_A 277 LVQTEEQYIFIHD 289 (627)
T ss_dssp SSCCHHHHHHHHH
T ss_pred CCCcHHHHHHHHH
Confidence 9999988777654
No 100
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=98.05 E-value=7.6e-06 Score=93.50 Aligned_cols=87 Identities=14% Similarity=0.120 Sum_probs=64.5
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH-----hcCCCHHHHHHHHHhcCCCc
Q 006606 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR-----SQSMSVAQAIKKFAEVRPPG 245 (639)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~-----~~g~s~~eAi~~~~~~Rp~~ 245 (639)
.+|+ .+|... +..|+..+... ....+++|+|||.+|+||||++||+.++. ...+++.+++..+|+.|+..
T Consensus 494 WPD~-gvP~~~-~~~li~~v~~~---~~~~~~PivVHCsaGiGRtGtf~a~~~~l~~l~~~~~vdv~~~v~~lR~qR~~~ 568 (627)
T 2nlk_A 494 WPNP-DAPISS-TFELINVIKEE---ALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGV 568 (627)
T ss_dssp SSCT-TSCGGG-HHHHHHHHHHH---HTTCCSCEEEEESSSCHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHHSTTS
T ss_pred CCCC-CcCChh-HHHHHHHHHHh---hccCCCeEEEEeCCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhh
Confidence 5676 466533 34455444321 23457899999999999999999987653 23479999999999999999
Q ss_pred cCCHHHHHHHHHHHhhc
Q 006606 246 IYKNEYIEALYTFYHEK 262 (639)
Q Consensus 246 i~~~~~l~~L~~~y~~~ 262 (639)
+.+..|...+++.-...
T Consensus 569 Vqt~~Qy~f~y~~v~~~ 585 (627)
T 2nlk_A 569 FTDIEQYQFIYKAMLSL 585 (627)
T ss_dssp SCSHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHH
Confidence 99999988887654443
No 101
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=96.91 E-value=0.0021 Score=68.03 Aligned_cols=69 Identities=10% Similarity=0.116 Sum_probs=58.4
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCC--h--hHHHHHHHHHHhcCCCHHHHHHHHHhcC
Q 006606 172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHN--R--TGYMIVHFLMRSQSMSVAQAIKKFAEVR 242 (639)
Q Consensus 172 ~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~--R--TG~li~aYLm~~~g~s~~eAi~~~~~~R 242 (639)
.|+ .+....++.+|+..+.+.+.+.. ..+.++|||+.|.. | |++|++||+|...||++++|+..+....
T Consensus 49 ~df-gp~~~~~~~~~~~~~~~~l~~~~-~~~k~~~~~~~~~~~~r~naa~L~~~y~~~~~~~~~~~a~~~~~~~~ 121 (348)
T 1ohe_A 49 ADF-GPLNLAMVYRYCCKINKKLKSIT-MLRKKIVHFTGSDQRKQANAAFLVGCYMVIYLGRTPEEAYRILIFGE 121 (348)
T ss_dssp SCC-CCCCHHHHHHHHHHHHHHHHCGG-GTTSEEEEEECSCHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTTT
T ss_pred hhc-CCccHHHHHHHHHHHHHHHhChh-hcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhcC
Confidence 466 47889999999999988776433 34689999999985 4 8999999999999999999999988763
No 102
>1s68_A RNA ligase 2; ribonucleic acid ligase, RNA repair; HET: AMP; 1.90A {Enterobacteria phage T4} SCOP: d.142.2.4
Probab=96.26 E-value=0.02 Score=57.63 Aligned_cols=109 Identities=13% Similarity=0.074 Sum_probs=66.8
Q ss_pred hhcccceeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCcCC---c----ccccccC----CCCeEeeEEEEEe
Q 006606 322 LLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNS---N----EGLGEKT----HHFTLLDGEMIID 390 (639)
Q Consensus 322 ~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~---~----~~~~~~~----~~~tlLDGElV~d 390 (639)
.+....++|+||.||+-+-+++.++++.+.+|++.+..-+-.++-... . ..+.+.. ..+.+|=||++--
T Consensus 24 ~~~~~~vvvtEKldG~N~~i~~~~~~i~~~sR~~~l~~~~~f~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~GE~~G~ 103 (249)
T 1s68_A 24 GLTGGEWVAREKIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFAGP 103 (249)
T ss_dssp TCSCSCEEEEECCCSEEEEEEEESSCEEEEETTEECCTTCCCTTTHHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEEST
T ss_pred ccCCCCEEEEEEECCcceEEEEECCEEEEEeCCcccCCCCccchHHHHHHHHHHHHHHHHHHhcccCCCcEEEEEEEccc
Confidence 456668999999999999998888889999998764211101110000 0 0010111 1467788999953
Q ss_pred cCCCC-CCceeEEEEeEee-ecCCeeccCCCHHHHHHHHHHH
Q 006606 391 KLPDS-RRQERRYLIYDMM-AINQASVIERPFYERWKMLEKE 430 (639)
Q Consensus 391 ~~~~~-~~~~~~yliFDiL-~~~G~~l~~~pf~eR~~~L~~~ 430 (639)
..... .-....|++|||. ..++....-+++.+|..+++..
T Consensus 104 ~Iq~~v~Y~~~~FyvFdI~~~~~~g~~~~l~~~~~~~l~~~~ 145 (249)
T 1s68_A 104 GIQKNVDYCDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTF 145 (249)
T ss_dssp TTSSSCCCCSCEEEEEEEEEEETTCCEEECCHHHHHHHHHHH
T ss_pred cccCCcccCCCeEEEEEEEEecCCCccccCCHHHHHHHHHHC
Confidence 21110 0014589999997 4343334557899999998875
No 103
>2hvq_A ORF1, hypothetical 37.6 kDa protein in GP24-HOC intergenic region; RNA, ligase, lysine adenylate; HET: APK; 2.40A {Enterobacteria phage T4} PDB: 2hvr_A* 2hvs_A*
Probab=96.10 E-value=0.032 Score=58.56 Aligned_cols=110 Identities=12% Similarity=0.055 Sum_probs=67.9
Q ss_pred hhcccceeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCcCCcc-------cccccC----CCCeEeeEEEEEe
Q 006606 322 LLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNE-------GLGEKT----HHFTLLDGEMIID 390 (639)
Q Consensus 322 ~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~-------~~~~~~----~~~tlLDGElV~d 390 (639)
.|....++|+||.||+-+-+++.++++.+.+|++.+..-.-.|+-..... .+.+.. ..+.+|=||++--
T Consensus 25 ~l~~~~vvvtEKlDG~N~~i~~~~~~i~~~sR~~~l~~~~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~i~GE~~G~ 104 (335)
T 2hvq_A 25 GLTGGEWVAREXIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFAGP 104 (335)
T ss_dssp TCSCSCEEEEECCSSEEEEEEEETTEEEEEETTEECCTTCCCTTTHHHHHHHHHHHHHHHTTHHHHTEEEEEEEEEEESB
T ss_pred ccCCCcEEEEEEecCcceEEEEECCEEEEecCCcccCCccccchHHHHHHHHHHHHHHHHHHhhccCCCcEEEEEEEccC
Confidence 45667899999999999999999899999999876421111111110000 111111 1467789999943
Q ss_pred cCCCC-CCceeEEEEeEee-ecCCeeccCCCHHHHHHHHHHHh
Q 006606 391 KLPDS-RRQERRYLIYDMM-AINQASVIERPFYERWKMLEKEV 431 (639)
Q Consensus 391 ~~~~~-~~~~~~yliFDiL-~~~G~~l~~~pf~eR~~~L~~~i 431 (639)
....+ .-....|++|||. ..++..-.-+++.+|..+++..-
T Consensus 105 ~Iq~~i~Y~~~~FyvFDI~~~~~~~~~~~l~~~~~~~l~~~~g 147 (335)
T 2hvq_A 105 GIQKNVDYGDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTFK 147 (335)
T ss_dssp TTBSSCCCCSSEEEEEEEEEEETTCCEEECCHHHHHHHHHHHT
T ss_pred cccCCcccCCCeEEEEEEEEecCCCceeeCCHHHHHHHHHHcC
Confidence 21100 0014589999997 43443344588999999998853
No 104
>1ta8_A DNA ligase, NAD-dependent; nucleotidyl transferase fold; HET: DNA NMN; 1.80A {Enterococcus faecalis} SCOP: d.142.2.2 PDB: 3ba8_A* 1tae_A* 3ba9_A* 3baa_A* 3bab_A*
Probab=95.36 E-value=0.17 Score=52.69 Aligned_cols=159 Identities=14% Similarity=0.125 Sum_probs=90.0
Q ss_pred ceeeeecCceeEEEEEEECCE-EEEEeCCCccc--cccCcCCCcCC-cccccccCCCCeEeeEEEEEecC----------
Q 006606 327 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL---------- 392 (639)
Q Consensus 327 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~---------- 392 (639)
.|++++|.||..+-|...++. +..++|.+-.. .|+.......+ +..+. . .....+-||+++.+.
T Consensus 114 ~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~-~-p~~leVRGEv~m~~~~F~~lN~~~~ 191 (332)
T 1ta8_A 114 AYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSVPMRLT-E-PISVEVRGECYMPKQSFVALNEERE 191 (332)
T ss_dssp CEEEEEEECSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHTTCTTSCSBCS-S-CCCEEEEEEEECCHHHHHHHHHHHH
T ss_pred eEEEeeeecceEEEEEEECCEEEEEEcCCCCccchhHHHHHHHhcCCccccC-C-CCeEEEEEEEEEEHHHHHHHHHHHH
Confidence 499999999999988777665 68999953311 12211111101 11121 1 233789999998532
Q ss_pred --CCC---------------------CCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCC
Q 006606 393 --PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPY 449 (639)
Q Consensus 393 --~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~ 449 (639)
++. ....+.|++|++...+|... ....+++..|+++-... +|.
T Consensus 192 ~~g~~~faNPRNaAAGsLrqld~~ita~R~L~ff~y~i~~~~~~~~--~t~~e~l~~L~~~GF~v------------~~~ 257 (332)
T 1ta8_A 192 ENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKA--KTQFEALEELSAIGFRT------------NPE 257 (332)
T ss_dssp HTTCCCCSSHHHHHHHHHTCSBHHHHHTSCCEEEEEEESCCTTCCC--SBHHHHHHHHHHTTCCC------------CTT
T ss_pred hcCCccccChHHHHHHHHHccChhhHhhCCCEEEEEecccccCCCC--CCHHHHHHHHHHcCCCC------------CCc
Confidence 110 02468999999964444332 57899999998854321 111
Q ss_pred ccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCCc------cCCCCCeEEEecCC
Q 006606 450 YRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPYV------PRTHEGLLKWKYAR 512 (639)
Q Consensus 450 ~~~~~~pf~I~~K~~~~~~~~~~l~~~~---~~~l~h~~DGLIf~p~~spY~------~G~~~~llKWKp~~ 512 (639)
. -. +-.+..+...++.+ ...+++..||||++-.+.++. ......-+=||+|.
T Consensus 258 ~--------~~---~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~tsk~PRWAiAyKfpa 318 (332)
T 1ta8_A 258 R--------QL---CQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYKFPP 318 (332)
T ss_dssp C--------EE---ESSHHHHHHHHHHHHHTGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECC-
T ss_pred c--------eE---eCCHHHHHHHHHHHHHHHhcCCCCCCcEEEEecCHHHHHHhCCcCCCCCceeEecCCC
Confidence 0 01 11122333333332 457889999999997665543 22234556666653
No 105
>1b04_A Protein (DNA ligase); DNA replication; 2.80A {Geobacillus stearothermophilus} SCOP: d.142.2.2
Probab=94.82 E-value=0.19 Score=52.16 Aligned_cols=159 Identities=14% Similarity=0.111 Sum_probs=88.8
Q ss_pred ceeeeecCceeEEEEEEECCE-EEEEeCCCccc--cccCcCCCcCC-cccccccCCCCeEeeEEEEEecC----------
Q 006606 327 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL---------- 392 (639)
Q Consensus 327 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~---------- 392 (639)
.|++++|.||..+-|...++. +..++|.+-.. .|+.......+ +..+. . .....+-||+++.+.
T Consensus 108 ~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~-~-p~~levRGEv~m~~~~F~~lN~~~~ 185 (318)
T 1b04_A 108 AYVCELAIDGLAVSVRYEDGYFVQGATRGDGTTGEDITENLKTIRSLPLRLK-E-PVSLEARGEAFMPKASFLRLNEERK 185 (318)
T ss_dssp CEEEEEEESSEEEEEEEETTEEEEEEECTTSSCEEBCHHHHHTCTTSCSBCS-S-CCCEEEEEEEECCHHHHHHHHHHHH
T ss_pred eEEEEEecccEEEEEEEECCEEEEEEccCCCcccHHHHHhHHHhcCCCcccC-C-CCeEEEEEEEEEEHHHHHHHHHHHH
Confidence 499999999999987777654 67899953211 12211111100 11111 0 233789999998532
Q ss_pred --CCC-----------------C----CceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCC
Q 006606 393 --PDS-----------------R----RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPY 449 (639)
Q Consensus 393 --~~~-----------------~----~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~ 449 (639)
++. + ...+.|++|++...+|.. -....+++..|+++-... +|.
T Consensus 186 ~~g~~~faNpRNaAAGsLrqld~~ita~R~L~ff~y~~~~~~~~~--~~t~~e~l~~L~~~Gf~v------------~~~ 251 (318)
T 1b04_A 186 ARGEELFANPRNAAAGSLRQLDPKVAASRQLDLFVYGLADAEALG--IASHSEALDYLQALGFKV------------NPE 251 (318)
T ss_dssp HC--CCCSCHHHHHHHHHHSSCHHHHHHTCCEEEEEEETTTTTTT--CCBHHHHHHHHHHTTCCC------------CTT
T ss_pred HcCCCccchhhHHHHHHHHccChhhHhhCCCEEEEEecccccCCC--CCCHHHHHHHHHHcCCCC------------CCc
Confidence 110 0 246899999995443422 257899999998854321 111
Q ss_pred ccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCCc------cCCCCCeEEEecCC
Q 006606 450 YRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPYV------PRTHEGLLKWKYAR 512 (639)
Q Consensus 450 ~~~~~~pf~I~~K~~~~~~~~~~l~~~~---~~~l~h~~DGLIf~p~~spY~------~G~~~~llKWKp~~ 512 (639)
. -. +-.+..+...++.+ ...+++..||||++-.+.++. ......-+=||+|.
T Consensus 252 ~--------~~---~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiA~Kfpa 312 (318)
T 1b04_A 252 R--------RR---CANIDEVIAFVSEWHDKRPQLPYEIDGIVIKVDSFAQQRALGATAKSPRWAIAYKFPA 312 (318)
T ss_dssp C--------EE---ESSHHHHHHHHHHHHHHSTTCSSCEEEEEEEECBHHHHHHHCCCSSSCTTEEEEECCC
T ss_pred c--------eE---eCCHHHHHHHHHHHHHHHhhCCCCCCcEEEEecCHHHHHHhCCcCCCCCceeeecCCc
Confidence 0 01 11122333333332 457889999999997665542 22234556666654
No 106
>4glw_A DNA ligase; inhibitor, ligase-ligase inhibitor complex; HET: DNA 0XT NMN; 2.00A {Streptococcus pneumoniae}
Probab=93.11 E-value=1.3 Score=45.71 Aligned_cols=153 Identities=15% Similarity=0.179 Sum_probs=87.3
Q ss_pred ccceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--C----cCCCcCCcccccccCCCCeEeeEEEEEecC---
Q 006606 325 QRYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL--- 392 (639)
Q Consensus 325 ~~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~--- 392 (639)
...|++++|.||+-+.|...++. +.+++|.+-.. .++ + ..|.. + .......+=||++..+.
T Consensus 101 ~~~~~~epKiDGlavsL~Y~~G~L~~a~TRGDG~~GeDiT~n~~tI~~IP~~-----l--~~~~~levRGEv~m~~~~F~ 173 (305)
T 4glw_A 101 HPTYICELKIDGLSISLTYEKGILVAGVTRGDGSIGENITENLKRVKDIPLT-----L--PEELDITVRGECYMPRASFD 173 (305)
T ss_dssp SCCEEEEEEECSEEEEEEEETTEEEEEEECTTSSEEEECHHHHTTSTTSCSB-----C--SSCCCEEEEEEEECCHHHHH
T ss_pred CCcEEEEeeecceEEEEEEeCCeEEEEEecCCCcchhhHHHHHhhccCCccc-----C--CCcccccccceEEeehhhHH
Confidence 45799999999999877776655 68899984321 111 1 11211 1 11234678999998431
Q ss_pred ---------CCC---------------------CCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccc
Q 006606 393 ---------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNI 442 (639)
Q Consensus 393 ---------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~ 442 (639)
+.. ....+.|++|++...+|. ....+++..|.++-..
T Consensus 174 ~~n~~~~~~g~~~faNpRNaaAGslrq~d~~~~~~r~L~f~~y~~~~~~~~----~s~~e~l~~L~~~Gf~--------- 240 (305)
T 4glw_A 174 QVNQARQENGEPEFANPRNAAAGTLRQLDTAVVAKRNLATFLYQEASPSTR----DSQEKGLKYLEQLGFV--------- 240 (305)
T ss_dssp HHHHHHHHTTCCCCSSHHHHHHHHHSSSBHHHHHHSCCEEEEEEESSSCSS----SBHHHHHHHHHHHTCC---------
T ss_pred HHHHHHHhcCCccchhhhHHHhhhhhccCchhhhhhcceEEEeeecccccc----chHHHHHHHHHhCCCc---------
Confidence 110 013578999998765552 3567889888885431
Q ss_pred cccCCCCccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCC------CccCCCCCeEEEecC
Q 006606 443 YQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYA 511 (639)
Q Consensus 443 ~~~~~p~~~~~~~pf~I~~K~~~~~~~~~~l~~~~---~~~l~h~~DGLIf~p~~sp------Y~~G~~~~llKWKp~ 511 (639)
.+|.. ...+ .+..+...++.+ -..+++..||||++-.+-+ |+.+....-+=||+|
T Consensus 241 ---~~~~~--------~~~~---~~~ev~~~~~~~~~~R~~l~y~iDGiVikvn~~~~q~~lG~tsk~PrWAiA~Kfp 304 (305)
T 4glw_A 241 ---VNPKR--------ILAE---NIDEIWNFIQEVGQERENLPYDIDGVVIKVNDLASQEELGFTVKAPKWAVAYKFP 304 (305)
T ss_dssp ---CCCCC--------EEES---SHHHHHHHHHHHHHHGGGSSSCEEEEEEEECBHHHHHHHCBCSSSBSSEEEEECC
T ss_pred ---cCCce--------EEeC---CHHHHHHHHHHHHHHhhcCCCCCCeEEEEEeCHHHHHHcCCcCCCCCceEEeCcc
Confidence 11211 1111 122222222222 3568899999999854332 333334456777776
No 107
>4glx_A DNA ligase; inhibitor, ligase-ligase inhibitor-DNA complex; HET: DNA 0XS; 1.90A {Escherichia coli}
Probab=92.97 E-value=2.1 Score=48.02 Aligned_cols=162 Identities=15% Similarity=0.162 Sum_probs=91.8
Q ss_pred cceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--C----cCCCcCCcccccccCCCCeEeeEEEEEecC----
Q 006606 326 RYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL---- 392 (639)
Q Consensus 326 ~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~---- 392 (639)
-.|++++|.||.-+.|...++. +..++|.+-.. .++ + ..|.... + ........+=||++..+.
T Consensus 108 ~~~~~epKiDGlavsL~Ye~G~Lv~a~TRGDG~~GeDiT~nvrtI~~IPl~l~--~--~~~p~~leVRGEv~m~~~~F~~ 183 (586)
T 4glx_A 108 VTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH--G--ENIPARLEVRGEVFLPQAGFEK 183 (586)
T ss_dssp -CEEEEEEESSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHTTCTTSCSBCC--S--SSCCSEEEEEEEEECCHHHHHH
T ss_pred ceEEEEEeecceEEEEEEeCCEEEEEEccCCCcccccHHHHHHhccCcccccc--c--CCCCceEEEEEEEEEEhhhccc
Confidence 4699999999999877776665 68999964321 111 1 1122111 0 011234568899997431
Q ss_pred --------CCC---------------------CCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCcccccccccc
Q 006606 393 --------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIY 443 (639)
Q Consensus 393 --------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~ 443 (639)
++. ....+.|++|++..++|.++. ....+++..|+++-..
T Consensus 184 ln~~~~~~g~~~faNpRNaaAGslrqld~~~~a~r~L~f~~y~v~~~~~~~~~-~t~~e~l~~L~~~Gf~---------- 252 (586)
T 4glx_A 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTHLGRLLQFKKWGLP---------- 252 (586)
T ss_dssp HHHHHHHTTCCCCSCHHHHHHHHHTCSCHHHHHTSCCEEEEEEEEEEESSCCC-SBHHHHHHHHHHTTCC----------
T ss_pred cchhhhhccCccchhhHHHHhccccccchhhhhccccceeEeeeeeeeccccc-ccHHHHHHHHHHcCCC----------
Confidence 110 024689999999888776543 3467888888875321
Q ss_pred ccCCCCccCCCCCcEEEecceeechhHHHHHH---HhcccccCCCceEEEEeCCCC------CccCCCCCeEEEecCCCc
Q 006606 444 QSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLK---EFIPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYARMN 514 (639)
Q Consensus 444 ~~~~p~~~~~~~pf~I~~K~~~~~~~~~~l~~---~~~~~l~h~~DGLIf~p~~sp------Y~~G~~~~llKWKp~~~n 514 (639)
.++++ -..+ .+..+...++ .....+.+..||||++-.+-+ |+.+....-+=||+|...
T Consensus 253 --v~~~~--------~~~~---~~~~~~~~~~~~~~~R~~l~y~iDGiVikvn~~~~~~~lG~ts~~PrwAiA~Kfp~e~ 319 (586)
T 4glx_A 253 --VSDRV--------TLCE---SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQE 319 (586)
T ss_dssp --CCTTC--------EEES---SHHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEECCCCCE
T ss_pred --Cccce--------eeec---cHHHHHHHHHHHHHhhhcccccCCceEEEecchhhhhccCCccCCCCeeEEEcccchh
Confidence 11111 0111 1122222222 223578899999999964432 333334556778877654
Q ss_pred e
Q 006606 515 S 515 (639)
Q Consensus 515 T 515 (639)
-
T Consensus 320 ~ 320 (586)
T 4glx_A 320 Q 320 (586)
T ss_dssp E
T ss_pred h
Confidence 3
No 108
>3jsl_A DNA ligase; NAD+-dependent, DNA damage, DNA repair, DNA replication, magnesium, manganese, metal-binding, NAD, zinc; HET: DNA; 1.80A {Staphylococcus aureus} SCOP: d.142.2.2 PDB: 3jsn_A*
Probab=92.71 E-value=1.8 Score=44.69 Aligned_cols=154 Identities=16% Similarity=0.179 Sum_probs=88.0
Q ss_pred ceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--C----cCCCcCCcccccccCCCCeEeeEEEEEecC-----
Q 006606 327 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 392 (639)
Q Consensus 327 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 392 (639)
.|++++|.||.-+-|...++. +..++|.+-.. .|+ + ..|.. +. ......+=||+++.+.
T Consensus 106 ~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~-----L~--~~~~levRGEv~m~~~~F~~l 178 (318)
T 3jsl_A 106 EYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLK-----MK--EPLNVEVRGEAYMPRRSFLRL 178 (318)
T ss_dssp CEEEEEEECSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHTTCTTSCSB-----CS--SCCCEEEEEEEECCHHHHHHH
T ss_pred eEEEEEeecceEEEEEEECCEEEEEEeCCCCccchhHHHHHHHhcCCccc-----cC--CCCcEEEEEEEEEcHHHHHHH
Confidence 799999999999977766554 57999964311 111 1 11211 10 0124678999998431
Q ss_pred -------CCC---------------------CCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccc
Q 006606 393 -------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQ 444 (639)
Q Consensus 393 -------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~ 444 (639)
+.. .+..+.|++|.+...+|... ....+++..|+++-..
T Consensus 179 N~~~~~~g~~~faNPRNaAAGsLRqld~~ita~R~L~ff~y~~~~~~~~~~--~t~~e~l~~L~~~GF~----------- 245 (318)
T 3jsl_A 179 NEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNA--RSQSEALDELDKLGFT----------- 245 (318)
T ss_dssp HHHHBTTBCCCCSSHHHHHHHHHSCSCHHHHHHSCCEEEEEEESCCTTCCC--SBHHHHHHHHHHHTCC-----------
T ss_pred HHHHHHhCCccccChHHHHHHHHHccChhhhhhCcceEEEEecccccCCCC--CCHHHHHHHHHHCCCC-----------
Confidence 100 02468999999987665433 4678999999886432
Q ss_pred cCCCCccCCCCCcEEEecceeechhHHHHHHH---hcccccCCCceEEEEeCCCC------CccCCCCCeEEEecCC
Q 006606 445 SRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKE---FIPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYAR 512 (639)
Q Consensus 445 ~~~p~~~~~~~pf~I~~K~~~~~~~~~~l~~~---~~~~l~h~~DGLIf~p~~sp------Y~~G~~~~llKWKp~~ 512 (639)
.+|.. -. +-.+..+...++. ....+++..||||++=.+-. |+......-+=||+|.
T Consensus 246 -v~~~~--------~~---~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiAyKfp~ 310 (318)
T 3jsl_A 246 -TNKNR--------AR---VNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFPA 310 (318)
T ss_dssp -CCTTC--------EE---ESSHHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBTTEEEEECC-
T ss_pred -cCCcc--------eE---eCCHHHHHHHHHHHHHHHhcCCCCCCcEEEEEeCHHHHHHhCCCCCCCCceEEECCCC
Confidence 11210 11 1122233333332 23578999999999975544 3322234455566553
No 109
>3uq8_A DNA ligase; adenylated protein, ATP-grAsp, rossman fold, adenylation; HET: DNA NAD AMP; 1.70A {Haemophilus influenzae} PDB: 3pn1_A* 3bac_A*
Probab=90.87 E-value=2.7 Score=43.58 Aligned_cols=158 Identities=15% Similarity=0.128 Sum_probs=89.0
Q ss_pred ceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--C----cCCCcCCcccccccCCCCeEeeEEEEEecC-----
Q 006606 327 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 392 (639)
Q Consensus 327 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 392 (639)
.|++++|.||.-+-|...++. +..++|.+-.. .|+ + ..|..-... .......+=||+++.+.
T Consensus 108 ~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IPl~L~~~----~~p~~leVRGEv~m~~~~F~~l 183 (322)
T 3uq8_A 108 TFCCEPKLDGLAVSILYVNGELTQAATRGDGTTGEDITANIRTIRNVPLQLLTD----NPPARLEVRGEVFMPHAGFERL 183 (322)
T ss_dssp EEEEEEEESSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHHTCTTSCSBCSCS----SCCSEEEEEEEEECCHHHHHHH
T ss_pred eEEEEEeeceEEEEEEEeCCEEEEEEecCCCccchhHHHHHHHhcCCCccccCC----CCCceEEEEEEEEeeHHHHHHH
Confidence 599999999999877776554 67999964311 111 1 112211100 01234678999998542
Q ss_pred -------CCC---------------------CCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccc
Q 006606 393 -------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQ 444 (639)
Q Consensus 393 -------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~ 444 (639)
+.. ....+.|++|.+...+|... .....+++..|+++-..
T Consensus 184 N~~~~~~g~~~faNPRNaAAGsLRqld~~ita~R~L~ff~y~~~~~~~~~~-~~t~~e~l~~L~~~Gf~----------- 251 (322)
T 3uq8_A 184 NKYALEHNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYGIGIAEGVDL-PTTHYARLQWLKSIGIP----------- 251 (322)
T ss_dssp HHHHHHTTCCCCSSHHHHHHHHHTCSCHHHHTTSCCEEEEEEEEEEESCCC-CSBHHHHHHHHHHTTCC-----------
T ss_pred HHHHHHhCCccccchhHHHHHHHhhcChhhhhcCccEEEEEeccccCCCCC-CCCHHHHHHHHHHcCCC-----------
Confidence 110 12468999999977666432 34678999999875321
Q ss_pred cCCCCccCCCCCcEEEecceeechhHHHHHHH---hcccccCCCceEEEEeCCCCCc------cCCCCCeEEEecCC
Q 006606 445 SRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKE---FIPKLSHDADGLVFQGWDDPYV------PRTHEGLLKWKYAR 512 (639)
Q Consensus 445 ~~~p~~~~~~~pf~I~~K~~~~~~~~~~l~~~---~~~~l~h~~DGLIf~p~~spY~------~G~~~~llKWKp~~ 512 (639)
.+|+. -. +-.+..+...++. ....+++..||||++=.+-++. ......-+=||+|.
T Consensus 252 -v~~~~--------~~---~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiA~Kfpa 316 (322)
T 3uq8_A 252 -VNPEI--------RL---CNGADEVLGFYRDIQNKRSSLGYDIDGTVLKINDIALQNELGFISKAPRWAIAYKFPA 316 (322)
T ss_dssp -CCTTC--------EE---EESHHHHHHHHHHHHHTTTTTSSCEEEEEEEESBHHHHHHHCEETTEETTEEEEECCC
T ss_pred -CCCCc--------EE---eCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHcCccCCCCCceEEEcCCc
Confidence 11110 11 1122333333333 2357889999999997554432 22234556666654
No 110
>1zau_A DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacterium tuberculosis}
Probab=86.15 E-value=0.39 Score=50.00 Aligned_cols=146 Identities=14% Similarity=0.093 Sum_probs=80.5
Q ss_pred cceeeeecCceeEEEEEEECCE-EEEEeCCCccc--cccC------cCCCcCCcccccccCCCCeEeeEEEEEecC----
Q 006606 326 RYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQM------RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL---- 392 (639)
Q Consensus 326 ~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~~------~FP~~~~~~~~~~~~~~~tlLDGElV~d~~---- 392 (639)
-.|++++|.||..+-|...++. +..++|.+-.. .|+. .-|..-. .+-.........+-||+++.+.
T Consensus 116 ~~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~-~g~~~~~p~~leVRGEv~m~~~~F~~ 194 (328)
T 1zau_A 116 AHYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLT-PGDDYPVPEVLEVRGEVFFRLDDFQA 194 (328)
T ss_dssp SCEEEEEEECSEEEEEECGGGBCCBCBBCTTSSEECBCHHHHHHSSSCCSBCC-CBTTBCCCSCCEEEEEEBCCHHHHHH
T ss_pred cceEEeeecceEEEEEEEECCEEEEEEccCCCcccHHHHHHHHHhcCCChhhc-cCCcCCCCCeEEEEEEEEEEHHHHHH
Confidence 3699999999999977665443 57888953211 1111 1122110 0000001233689999998531
Q ss_pred --------CCC--------------C-------CceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCcccccccccc
Q 006606 393 --------PDS--------------R-------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIY 443 (639)
Q Consensus 393 --------~~~--------------~-------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~ 443 (639)
++. + +..+.|++|++..+++... ....+++..|+++-..-
T Consensus 195 lN~~~~~~g~~~faNPRNaAAGsLrqld~~ita~R~L~f~~y~i~~~~~~~~--~t~~e~l~~L~~~Gf~v--------- 263 (328)
T 1zau_A 195 LNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRP--ATLHQAYLALRAWGLPV--------- 263 (328)
T ss_dssp HHHSCSSTTSCCCSSHHHHHHHHHTCSSHHHHHHSCCBCCCCBCCCCSSCCC--SBHHHHHHHHHTTTCCC---------
T ss_pred HHHHHHHcCCccccChHHHHHHHHHccChhhhhcCcceEEEEeccccCCCCC--CCHHHHHHHHHHcCCCC---------
Confidence 110 0 1357899999965554322 56888998888754311
Q ss_pred ccCCCCccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCC
Q 006606 444 QSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY 497 (639)
Q Consensus 444 ~~~~p~~~~~~~pf~I~~K~~~~~~~~~~l~~~~---~~~l~h~~DGLIf~p~~spY 497 (639)
+|+. +-+-.+..+...++.+ ...+.+..||||++-.+..+
T Consensus 264 ---~~~~-----------~~~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~ 306 (328)
T 1zau_A 264 ---SEHT-----------TLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVAL 306 (328)
T ss_dssp ---CCCC-----------CCBCHHHHHHHHHHHTTTTCSSCSSCEEEEEEEECBHHH
T ss_pred ---CCce-----------EEeCCHHHHHHHHHHHHHHHhcCCCCCceEEEEecCHHH
Confidence 1111 0111223333444443 35688999999999755544
No 111
>1xdn_A RNA editing ligase MP52; HET: MSE ATP; 1.20A {Trypanosoma brucei} SCOP: d.142.2.4
Probab=85.93 E-value=4.5 Score=40.69 Aligned_cols=107 Identities=17% Similarity=0.113 Sum_probs=62.5
Q ss_pred hhcccceeeeecCceeEEEEEE--ECCE--EEEEeCCCccccccCcCC-------Cc----CCc-ccccc----cCCCCe
Q 006606 322 LLRQRYYYATWKADGTRYMMLI--TIDG--CYLIDRCFNFRRVQMRFP-------CR----NSN-EGLGE----KTHHFT 381 (639)
Q Consensus 322 ~l~~~~Y~V~eK~DG~R~ll~i--~~~~--vyLidR~~~~~~v~~~FP-------~~----~~~-~~~~~----~~~~~t 381 (639)
.|....|+|+||.||.-+-+++ +++. +..-.|++-+- .+-.|- .. ... +.+.. ......
T Consensus 29 ~l~~~ewvatEKIHGaNFsii~~~d~~~~~i~~akRs~~l~-~~e~FfGy~~i~~~l~~~~~~l~~~l~~~~~~~~~~~v 107 (277)
T 1xdn_A 29 GLAAQEWVACEKVHGTNFGIYLINQGDHEVVRFAKRSGIMD-PNENFFGYHILIDEFTAQIRILNDLLKQKYGLSRVGRL 107 (277)
T ss_dssp TGGGSCEEEEEECCSEEEEEEEEEETTEEEEEEEETTEECC-TTCCCTTGGGGHHHHHHHHHHHHHHHHHHHTCSCCSEE
T ss_pred CCCCCcEEEEEeeccccEEEEEecCCCeeEEEEeecccccC-cccccccHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Confidence 3556689999999999998887 6666 77788875321 111111 00 000 00000 012456
Q ss_pred EeeEEEEEec---------------CCC---------CCC-------ceeEEEEeEeeecCC---eeccCCCHHHHHHHH
Q 006606 382 LLDGEMIIDK---------------LPD---------SRR-------QERRYLIYDMMAINQ---ASVIERPFYERWKML 427 (639)
Q Consensus 382 lLDGElV~d~---------------~~~---------~~~-------~~~~yliFDiL~~~G---~~l~~~pf~eR~~~L 427 (639)
++=|||.--. .+. -++ ....|++|||...++ .+..-++|.+=...+
T Consensus 108 ~VyGELfGg~y~hp~v~~~~~~~~~~~~~~~p~~~~~IQ~~i~~~Y~p~~~FYaFDI~~~~~~~~~~~~~L~fd~~~~~~ 187 (277)
T 1xdn_A 108 VLNGELFGAKYKHPLVPKSEKWCTLPNGKKFPIAGVQIQREPFPQYSPELHFFAFDIKYSVSGAEEDFVLLGYDEFVEFS 187 (277)
T ss_dssp EEEEEEEEEECCCTTSCCCCCEEECTTSCEEEGGGCCSCCCSSCCCEEEEEEEEEEEEEESSCCGGGEEECCHHHHHHHH
T ss_pred EEEEEEecCccCCccccccccccccCccccCcccccccccccccccCCCceEEEEEEEEecCCCccccccCCHHHHHHHH
Confidence 7899998533 000 011 146799999998752 234578888777666
Q ss_pred HH
Q 006606 428 EK 429 (639)
Q Consensus 428 ~~ 429 (639)
.+
T Consensus 188 ~~ 189 (277)
T 1xdn_A 188 SK 189 (277)
T ss_dssp HT
T ss_pred HH
Confidence 65
No 112
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=84.10 E-value=15 Score=41.74 Aligned_cols=159 Identities=14% Similarity=0.152 Sum_probs=89.7
Q ss_pred ceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--C----cCCCcCCcccccccCCCCeEeeEEEEEecC-----
Q 006606 327 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 392 (639)
Q Consensus 327 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 392 (639)
.|++++|.||.-+-|...++. +..++|.+-.. .++ + ..|..- .+ +.......+=||++..+.
T Consensus 109 ~~~~e~KiDGlaisL~Ye~G~Lv~a~TRGDG~~GEdvT~n~rtI~~IP~~l--~~--~~~p~~levRGEv~m~~~~F~~l 184 (671)
T 2owo_A 109 TWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKL--HG--ENIPARLEVRGEVFLPQAGFEKI 184 (671)
T ss_dssp CEEEEEEESSEEEEEEEETTEEEEEECCTTSSEEEBCHHHHHTCTTSCSBC--CS--SSCCSEEEEEEEEECCHHHHHHH
T ss_pred eEEEEEecceEEEEEEEeCCEEEEEEecCCCcchhhHHHHHhhhcCCCccc--cC--CCCCCeEEEEEEEEEEHHHHHHH
Confidence 599999999999977776554 57899964321 111 1 112211 00 001223678999998432
Q ss_pred -------CCC---------------------CCceeEEEEeEeeecCC-eeccCCCHHHHHHHHHHHhcCcccccccccc
Q 006606 393 -------PDS---------------------RRQERRYLIYDMMAINQ-ASVIERPFYERWKMLEKEVIEPRNYERHNIY 443 (639)
Q Consensus 393 -------~~~---------------------~~~~~~yliFDiL~~~G-~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~ 443 (639)
++. ...++.|++|++...+| .+ -....+++..|+++-..-
T Consensus 185 N~~~~~~g~~~faNpRNaaAGsLrqld~~~~a~R~L~~~~y~~~~~~~~~~--~~t~~e~l~~L~~~Gf~v--------- 253 (671)
T 2owo_A 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL--PDTHLGRLLQFKKWGLPV--------- 253 (671)
T ss_dssp HHHHHHSSCCCCSCHHHHHHHHHTCSCHHHHHTSCCEEEEEEEEEEESSCC--CSBHHHHHHHHHHHTCCC---------
T ss_pred HHHHHhcCCCcccChHHHHHHHHHhcChhhHhcCCCEEEEEECcccCCCCC--CCCHHHHHHHHHHCCCCC---------
Confidence 110 02468999999965554 32 256788999998864321
Q ss_pred ccCCCCccCCCCCcEEEecceeechhHHHHHHH---hcccccCCCceEEEEeCCCC------CccCCCCCeEEEecCCCc
Q 006606 444 QSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKE---FIPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYARMN 514 (639)
Q Consensus 444 ~~~~p~~~~~~~pf~I~~K~~~~~~~~~~l~~~---~~~~l~h~~DGLIf~p~~sp------Y~~G~~~~llKWKp~~~n 514 (639)
+|.. -. +-.+..+...++. ....+++..||+|++=.+-+ |+......-+=||+|...
T Consensus 254 ---~~~~--------~~---~~~~~~v~~~~~~~~~~R~~l~y~iDGvViKv~~~~~q~~LG~t~k~PrWAiA~Kfpae~ 319 (671)
T 2owo_A 254 ---SDRV--------TL---CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQE 319 (671)
T ss_dssp ---CTTC--------EE---ESSHHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECCCCE
T ss_pred ---CCcc--------ee---eCCHHHHHHHHHHHHHHHhcCCCCCccEEEEecCHHHHHHhCcccCCCCceEEEcCCCce
Confidence 1110 01 1112233333332 34678999999999975543 333333455667766554
No 113
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=83.97 E-value=1.8 Score=38.46 Aligned_cols=85 Identities=12% Similarity=0.188 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcE--------EEEeeccCCCCCCCHHHHHHHHHHHHHHHHh
Q 006606 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIK--------HVKIQCKGRDAVPDNASVNNFVYEVTQFLSR 196 (639)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~--------y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~ 196 (639)
.++.++.+.+... .++ .+||+.. +.+|...|+. .+++|... .+ ...|...+...+.
T Consensus 7 is~~e~~~~l~~~-~~~-~liDVR~------~~E~~~~~~~~~~g~~~ga~~ip~~~---~~----~~~~~~~l~~~~~- 70 (134)
T 1vee_A 7 GSAKNAYTKLGTD-DNA-QLLDIRA------TADFRQVGSPNIKGLGKKAVSTVYNG---ED----KPGFLKKLSLKFK- 70 (134)
T ss_dssp CCHHHHHHHHHHC-TTE-EEEECSC------HHHHHHTCEECCTTTSCCCEECCCCG---GG----HHHHHHHHHTTCS-
T ss_pred cCHHHHHHHHHhC-CCe-EEEEcCC------HHHHhhcCCCcccccCCceEEeeccc---cc----ChhHHHHHHHHhC-
Confidence 4577777665432 233 5999984 3556544543 45555432 11 1223322211000
Q ss_pred cccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006606 197 QKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (639)
Q Consensus 197 ~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~ 229 (639)
..++..|+|+|..| +||. .++.+|.. .|+
T Consensus 71 -~~~~~~ivv~C~sG-~RS~-~aa~~L~~-~G~ 99 (134)
T 1vee_A 71 -DPENTTLYILDKFD-GNSE-LVAELVAL-NGF 99 (134)
T ss_dssp -CGGGCEEEEECSSS-TTHH-HHHHHHHH-HTC
T ss_pred -CCCCCEEEEEeCCC-CcHH-HHHHHHHH-cCC
Confidence 14568999999999 4874 44554544 455
No 114
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=77.31 E-value=39 Score=38.34 Aligned_cols=160 Identities=13% Similarity=0.099 Sum_probs=85.0
Q ss_pred ceeeeecCceeEEEEEEECCEEEEEeCCCccc--cccCcCCCcCC-cccccccCCCCeEeeEEEEEecC-----------
Q 006606 327 YYYATWKADGTRYMMLITIDGCYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL----------- 392 (639)
Q Consensus 327 ~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~----------- 392 (639)
.|++++|.||.-+ |...++. ..++|.+-.. .++.......+ +..+. .......+=||++..+.
T Consensus 110 ~~~~e~KiDGlai-L~Ye~G~-~a~TRGDG~~GedvT~n~rtI~~iP~~l~-~~p~~levRGEv~m~~~~F~~lN~~~~~ 186 (667)
T 1dgs_A 110 LYTVEHKVDGLSV-LYYEEGV-WSTGSGDGEVGEEVTQNLLTIPTIPRRLK-GVPDRLEVRGEVYMPIEAFLRLNEELEE 186 (667)
T ss_dssp EEEEEECCSCEEE-EEEETTE-EEEEECSSSEEEBCTGGGTSSTTSCSBCS-SCCSEEEEEEEEECCHHHHHHHHHHHHH
T ss_pred eEEEEEccceeEE-EEEcCCC-EEEeeCCCcchhhHHHHHhhhcCCCcccC-CCCCeEEEEEEEEEEHHHHHHHHHHHHh
Confidence 3999999999999 6666666 8999964321 12211100000 01110 00122578999998532
Q ss_pred -CCC---------------------CCcee--EEEEeEeee-cCCeeccCCCHHHHHHHHHHHhcCccccccccccccCC
Q 006606 393 -PDS---------------------RRQER--RYLIYDMMA-INQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRN 447 (639)
Q Consensus 393 -~~~---------------------~~~~~--~yliFDiL~-~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~ 447 (639)
+.. ....+ .|++|+++. .++.. -....+++..|.++-..- +
T Consensus 187 ~g~~~faNpRNaaAGsLrqld~~~~a~r~L~~~~~~y~~~~~~~~~~--~~t~~e~l~~L~~~Gf~v------------~ 252 (667)
T 1dgs_A 187 RGEKVFKNPRNAAAGSLRQKDPRVTAKRGLRATFYALGLGLGLEESG--LKSQYELLLWLKEKGFPV------------E 252 (667)
T ss_dssp HTCCCCSSHHHHHHHHHSCSSHHHHHHSCCEEECCCBCTTTTTTSCC--CCBHHHHHHHHHHTTCCC------------C
T ss_pred cCCCcccChHHHHHHHHHhcChhhhhhCCCCCEEEEEEeeccCCCCC--CCCHHHHHHHHHHCCCCC------------C
Confidence 110 01457 889998741 23322 256788888888754311 1
Q ss_pred CCccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCC------ccCCCCCeEEEecCCCc
Q 006606 448 PYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYARMN 514 (639)
Q Consensus 448 p~~~~~~~pf~I~~K~~~~~~~~~~l~~~~---~~~l~h~~DGLIf~p~~spY------~~G~~~~llKWKp~~~n 514 (639)
|. .+ -+-.+..+...++.+ ...+++..||+|++=.+-++ +......-+=||+|...
T Consensus 253 ~~---------~~--~~~~~~~v~~~~~~~~~~R~~l~y~iDGvViKv~~~~~q~~LG~t~k~PrWAiA~Kfpae~ 317 (667)
T 1dgs_A 253 HC---------YE--KALGAEGVEEVYRRGLAQRHALPFEADGVVLKLDDLTLWGELGYTARAPRFALAYKFPAEE 317 (667)
T ss_dssp SC---------EE--EEEHHHHHHHHHHHHHHTTTTSSSCCCEEEEEESBTHHHHHSCBCSSCBSSEEEEECCCCC
T ss_pred cc---------ce--EeCCHHHHHHHHHHHHHHHhcCCCCCCcEEEEecCHHHHHHhCcccCCCCceEEecCCCce
Confidence 11 11 111122333333333 35788999999999755443 33333445666666544
No 115
>3sgi_A DNA ligase; HET: DNA AMP; 3.50A {Mycobacterium tuberculosis}
Probab=74.53 E-value=25 Score=39.52 Aligned_cols=161 Identities=14% Similarity=0.088 Sum_probs=88.3
Q ss_pred ceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--C----cCCCcCCcccccccCCCCeEeeEEEEEecC-----
Q 006606 327 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 392 (639)
Q Consensus 327 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 392 (639)
.|++++|.||.=+-|...++. +..++|.+-.. .++ + ..|..-...+. ........+=||++..+.
T Consensus 117 ~~~~EpKiDGlavsL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~~~~~-~~~p~~levRGEv~m~~~~F~~l 195 (615)
T 3sgi_A 117 HYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDD-YPVPEVLEVRGEVFFRLDDFQAL 195 (615)
T ss_dssp CEEEEEEECSEEEEEEEETTEEEEEECCTTSSSCBCCHHHHHSCSSSCSSCCCCSS-CCCCSEEEEEEEEECCHHHHHHH
T ss_pred eEEEEEEecceEEEEEEECCEEEEEEecCCCcchhhHHHHHHhhcCcchhhcCCcc-cCCCCeEEEEEEEEEeHHHHHHH
Confidence 799999999999977776655 58899964311 111 1 12221100000 001234678999998431
Q ss_pred -------CCC-----------------C----CceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccc
Q 006606 393 -------PDS-----------------R----RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQ 444 (639)
Q Consensus 393 -------~~~-----------------~----~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~ 444 (639)
+.. . +..+.|++|.+...+|... ....+++..|+++-+.
T Consensus 196 N~~~~~~g~~~faNpRNaAAGsLRqld~~ita~R~L~~f~y~~~~~~~~~~--~t~~e~l~~L~~~Gf~----------- 262 (615)
T 3sgi_A 196 NASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRP--ATLHQAYLALRAWGLP----------- 262 (615)
T ss_dssp HTTCSSSSSCCCSSHHHHHHHHHTCSSTTHHHHSCCEEEEEEEEEEESCCC--SBTTTHHHHHHHTTCC-----------
T ss_pred HHHHHHcCCCcCCChHHHHHHHHHcCChhhHhhCcceEEEEeccccCCCCC--cCHHHHHHHHHHCCCC-----------
Confidence 100 0 1468899999987665332 3456788888875321
Q ss_pred cCCCCccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCC------ccCCCCCeEEEecCCC
Q 006606 445 SRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYARM 513 (639)
Q Consensus 445 ~~~p~~~~~~~pf~I~~K~~~~~~~~~~l~~~~---~~~l~h~~DGLIf~p~~spY------~~G~~~~llKWKp~~~ 513 (639)
.+|+. +-+-.+..+....+.+ -..+++..||+|++=.+-++ +.+....-+=||+|..
T Consensus 263 -v~~~~-----------~~~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~lG~t~k~PRWAiA~Kfpae 328 (615)
T 3sgi_A 263 -VSEHT-----------TLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPE 328 (615)
T ss_dssp -CCCCC-----------CCBSSHHHHHHHHTTTTTSGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECCCS
T ss_pred -CCCCe-----------EeeCCHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCHHHHHHhCCCCCCCCceEEEcCCCc
Confidence 11110 0111222333333322 34688999999999755433 2222345666776655
No 116
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=58.30 E-value=11 Score=41.37 Aligned_cols=27 Identities=26% Similarity=0.389 Sum_probs=21.9
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHH
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMR 225 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~ 225 (639)
..|..|+|||.-|-.||+-+.+.-.+-
T Consensus 327 ~~g~sVLVhcsDGwDrT~ql~SLaqll 353 (512)
T 2yf0_A 327 VENASVLVHCSDGWDRTSQVCSLGSLL 353 (512)
T ss_dssp TTCCCEEECTTTSSSHHHHHHHHHHHH
T ss_pred hCCCeEEEECCCCccccHHHHHHHHHH
Confidence 478999999999999998876655443
No 117
>2c5u_A RNA ligase, T4 RNA ligase 1; nucleotidyl transferase, ATP-binding; HET: APC; 2.21A {Bacteriophage T4}
Probab=57.83 E-value=21 Score=37.66 Aligned_cols=101 Identities=10% Similarity=-0.044 Sum_probs=59.6
Q ss_pred ccceeeeecCceeEEEEEEECCEEEEEeCCCccccccCcCCCc-CC--ccc---cc-ccCCCCeEeeEEEEEecCCCCCC
Q 006606 325 QRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCR-NS--NEG---LG-EKTHHFTLLDGEMIIDKLPDSRR 397 (639)
Q Consensus 325 ~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~-~~--~~~---~~-~~~~~~tlLDGElV~d~~~~~~~ 397 (639)
..++.|++|.||.=+..+..++.+++.+|.+-...-..++... .. ... +. +....+..+=||++....+-.-.
T Consensus 92 ~~pv~V~eK~DGslv~~~~~~G~l~~~SKgs~~~~~a~~~~~~l~~~~~~~l~~~~~~l~~~~~t~~fE~~~pen~hVl~ 171 (375)
T 2c5u_A 92 NDVDYILTKEDGSLVSTYLDGDEILFKSKGSIKSEQALMANGILMNINHHRLRDRLKELAEDGFTANFEFVAPTNRIVLA 171 (375)
T ss_dssp GGEEEEEEECCSEEEEEEEETTEEEEEETTBSSSHHHHHHHHHHHSGGGHHHHHHHHHHHHTTEEEEEEEECTTSCSSSC
T ss_pred CCCEEEEEecCCeEEEEEEECCEEEEEeCCCCCChHHHHHHHHHhhhcchHHHHHHHHhcCCCCEEEEEEcCCCCceecc
Confidence 4689999999999877777888899999986421000000000 00 000 00 01135666779999754321100
Q ss_pred -ceeEEEEeEeeecC-CeeccCCCHHHHHHHHH
Q 006606 398 -QERRYLIYDMMAIN-QASVIERPFYERWKMLE 428 (639)
Q Consensus 398 -~~~~yliFDiL~~~-G~~l~~~pf~eR~~~L~ 428 (639)
....+++||+...+ |+- +|+.++.+..+
T Consensus 172 Y~~~~L~L~~i~~n~tg~~---l~~~e~~~~a~ 201 (375)
T 2c5u_A 172 YQEMKIILLNVRENETGEY---ISYDDIYKDAT 201 (375)
T ss_dssp CSSCEEEEEEEEETTTCCB---CCHHHHHHCTT
T ss_pred CCCCCEEEEEEEEcCCCcE---ecHHHHHHHHh
Confidence 23679999998865 444 78888865543
No 118
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=54.48 E-value=16 Score=40.29 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=20.2
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHH
Q 006606 200 SKKYILVHCTHGHNRTGYMIVHFLM 224 (639)
Q Consensus 200 ~~~~VlVHC~~G~~RTG~li~aYLm 224 (639)
.+..|+|||.-|-.||.-+++.-.+
T Consensus 340 ~~~sVLvhcsdGwDrT~ql~SLaql 364 (528)
T 1zsq_A 340 GKTSVVVHSSDGWDRTAQLTSLAML 364 (528)
T ss_dssp TCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred CCceEEEECCCCccchHHHHHHHHH
Confidence 3469999999999999987765543
No 119
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=51.98 E-value=13 Score=31.32 Aligned_cols=29 Identities=17% Similarity=0.518 Sum_probs=19.8
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s 230 (639)
.++..|+|+|..| +||. .+|.+| ...|++
T Consensus 54 ~~~~~ivv~C~~G-~rS~-~aa~~L-~~~G~~ 82 (103)
T 3iwh_A 54 NKNEIYYIVCAGG-VRSA-KVVEYL-EANGID 82 (103)
T ss_dssp CTTSEEEEECSSS-SHHH-HHHHHH-HTTTCE
T ss_pred cCCCeEEEECCCC-HHHH-HHHHHH-HHcCCC
Confidence 4678999999998 5775 344444 446763
No 120
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=48.78 E-value=22 Score=40.16 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=20.2
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHH
Q 006606 200 SKKYILVHCTHGHNRTGYMIVHFLM 224 (639)
Q Consensus 200 ~~~~VlVHC~~G~~RTG~li~aYLm 224 (639)
.+..|+|||.-|-.||.-+++.-.+
T Consensus 412 ~~~sVLVhcsDGwDrT~qlsSLaQL 436 (657)
T 1lw3_A 412 GKTSVVVHSSDGWDRTAQLTSLAML 436 (657)
T ss_dssp TCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred CCceEEEECCCCccchHHHHHHHHH
Confidence 3469999999999999987765543
No 121
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=45.72 E-value=14 Score=32.39 Aligned_cols=28 Identities=14% Similarity=0.263 Sum_probs=19.1
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~ 229 (639)
.++..|+|+|..| .||.. + ++++...|+
T Consensus 84 ~~~~~ivvyC~~G-~rs~~-a-~~~L~~~G~ 111 (139)
T 2hhg_A 84 QEDKKFVFYCAGG-LRSAL-A-AKTAQDMGL 111 (139)
T ss_dssp GSSSEEEEECSSS-HHHHH-H-HHHHHHHTC
T ss_pred CCCCeEEEECCCC-hHHHH-H-HHHHHHcCC
Confidence 4678999999998 47753 3 444444565
No 122
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=45.23 E-value=16 Score=30.19 Aligned_cols=28 Identities=14% Similarity=0.469 Sum_probs=18.5
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~ 229 (639)
.++..|+|+|..| .||. .++. ++...|+
T Consensus 54 ~~~~~ivvyC~~g-~rs~-~a~~-~L~~~G~ 81 (100)
T 3foj_A 54 NDNETYYIICKAG-GRSA-QVVQ-YLEQNGV 81 (100)
T ss_dssp CTTSEEEEECSSS-HHHH-HHHH-HHHTTTC
T ss_pred CCCCcEEEEcCCC-chHH-HHHH-HHHHCCC
Confidence 4578999999888 5654 4444 4454565
No 123
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=44.70 E-value=45 Score=33.87 Aligned_cols=91 Identities=5% Similarity=0.061 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcEEEEeecc------CCCCCCCHHHHHHHHHHHHHHHHhcc
Q 006606 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCK------GRDAVPDNASVNNFVYEVTQFLSRQK 198 (639)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~------d~~~~P~~~~i~~f~~~v~~fi~~~~ 198 (639)
.+++.|.+.+. ..+ ..|||++.....|....+. | -+.+|+. ..+..|+.+.+...+..+ ..
T Consensus 42 is~~~l~~~l~--~~~-~~iiDvR~~~e~y~~gHIp--G--Ai~ip~~~~~~~~~~~~~~~~~~~~~~l~~l------gi 108 (318)
T 3hzu_A 42 VTADWLSAHMG--APG-LAIVESDEDVLLYDVGHIP--G--AVKIDWHTDLNDPRVRDYINGEQFAELMDRK------GI 108 (318)
T ss_dssp ECHHHHHHHTT--CTT-EEEEECCSSTTSGGGCBCT--T--EEECCHHHHHBCSSSSSBCCHHHHHHHHHHT------TC
T ss_pred ecHHHHHHhcc--CCC-EEEEECCCChhHHhcCcCC--C--CeEeCchhhhccCcccCCCCHHHHHHHHHHc------CC
Confidence 34666665442 123 4699998543324333332 2 2344431 011355555554433211 13
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s 230 (639)
.++..|+|+|..|..|+. .++++++..|++
T Consensus 109 ~~~~~vVvyc~~g~~~a~--~a~~~L~~~G~~ 138 (318)
T 3hzu_A 109 ARDDTVVIYGDKSNWWAA--YALWVFTLFGHA 138 (318)
T ss_dssp CTTCEEEEECSGGGHHHH--HHHHHHHHTTCS
T ss_pred CCCCeEEEECCCCCccHH--HHHHHHHHcCCC
Confidence 467899999999865654 344666666764
No 124
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=41.78 E-value=20 Score=32.03 Aligned_cols=89 Identities=15% Similarity=0.268 Sum_probs=41.8
Q ss_pred CHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCC-c-------EEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 006606 126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEG-I-------KHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQ 197 (639)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~g-I-------~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~ 197 (639)
++.++.+.+.. +.++ .|||+.. +.++...| | .-+.+|..+....+.. .|...+.+.+.+.
T Consensus 8 s~~el~~~l~~-~~~~-~liDVR~------~~e~~~~ghi~~~g~~pgAv~ip~~~~~~~~~~----~~~~~l~~~l~~~ 75 (148)
T 2fsx_A 8 TPLQAWEMLSD-NPRA-VLVDVRC------EAEWRFVGVPDLSSLGREVVYVEWATSDGTHND----NFLAELRDRIPAD 75 (148)
T ss_dssp CHHHHHHHHHH-CTTC-EEEECSC------HHHHHHTCEECCGGGTCCCEECCSBCTTSCBCT----THHHHHHHHCC--
T ss_pred CHHHHHHHHhc-CCCe-EEEECCC------HHHHHhcCCCccccCCCCcEEeeeeccccccCH----HHHHHHHHHHhhc
Confidence 46677665543 2233 5999984 34555312 2 2455666431001111 1222222222100
Q ss_pred -ccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006606 198 -KHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (639)
Q Consensus 198 -~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~ 229 (639)
..++..|+|+|..| +||. .++. ++...|+
T Consensus 76 ~~~~~~~ivvyC~~G-~rS~-~aa~-~L~~~G~ 105 (148)
T 2fsx_A 76 ADQHERPVIFLCRSG-NRSI-GAAE-VATEAGI 105 (148)
T ss_dssp -----CCEEEECSSS-STHH-HHHH-HHHHTTC
T ss_pred cCCCCCEEEEEcCCC-hhHH-HHHH-HHHHcCC
Confidence 13567899999998 5775 4444 4444555
No 125
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=41.50 E-value=18 Score=30.42 Aligned_cols=28 Identities=29% Similarity=0.485 Sum_probs=18.4
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~ 229 (639)
.++..|+|+|..| .||. .++ .++...|+
T Consensus 53 ~~~~~ivvyC~~G-~rs~-~aa-~~L~~~G~ 80 (108)
T 3gk5_A 53 ERDKKYAVICAHG-NRSA-AAV-EFLSQLGL 80 (108)
T ss_dssp CTTSCEEEECSSS-HHHH-HHH-HHHHTTTC
T ss_pred CCCCeEEEEcCCC-cHHH-HHH-HHHHHcCC
Confidence 4678999999887 5654 334 44454564
No 126
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=40.65 E-value=25 Score=29.01 Aligned_cols=28 Identities=11% Similarity=0.332 Sum_probs=18.7
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~ 229 (639)
.++..|+|+|..| .||.. + +.++...|+
T Consensus 54 ~~~~~iv~yC~~g-~rs~~-a-~~~L~~~G~ 81 (103)
T 3eme_A 54 NKNEIYYIVCAGG-VRSAK-V-VEYLEANGI 81 (103)
T ss_dssp CTTSEEEEECSSS-SHHHH-H-HHHHHTTTC
T ss_pred CCCCeEEEECCCC-hHHHH-H-HHHHHHCCC
Confidence 4678999999998 57643 3 444454565
No 127
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=40.15 E-value=20 Score=31.64 Aligned_cols=28 Identities=21% Similarity=0.366 Sum_probs=19.3
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~ 229 (639)
.++..|+|+|..|. ||.. ++.+| ...|+
T Consensus 80 ~~~~~ivvyC~~G~-rS~~-aa~~L-~~~G~ 107 (137)
T 1qxn_A 80 DPEKPVVVFCKTAA-RAAL-AGKTL-REYGF 107 (137)
T ss_dssp CTTSCEEEECCSSS-CHHH-HHHHH-HHHTC
T ss_pred CCCCeEEEEcCCCc-HHHH-HHHHH-HHcCC
Confidence 46789999999995 7653 44444 44565
No 128
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=38.94 E-value=23 Score=30.57 Aligned_cols=80 Identities=24% Similarity=0.266 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchh-hcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCe
Q 006606 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDL-KKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKY 203 (639)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~-~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~ 203 (639)
-++.++.+.+.....+ ..|||+.... ++ .. | +| +|--.+|- ..+. +.+.. ..++..
T Consensus 17 is~~el~~~l~~~~~~-~~liDvR~~~------e~~~~-g----hI--pgA~nip~-~~l~-------~~~~~-l~~~~~ 73 (124)
T 3flh_A 17 IDHHTVLADMQNATGK-YVVLDVRNAP------AQVKK-D----QI--KGAIAMPA-KDLA-------TRIGE-LDPAKT 73 (124)
T ss_dssp ECHHHHHHHHHHTCCC-EEEEECCCSC------HHHHC-C----EE--TTCEECCH-HHHH-------HHGGG-SCTTSE
T ss_pred ecHHHHHHHHHcCCCC-EEEEECCCHH------HHHhc-C----cC--CCCEECCH-HHHH-------HHHhc-CCCCCe
Confidence 3567777766543222 4699998533 33 22 2 22 22212443 2222 22222 345789
Q ss_pred EEEEcCCCCChh-HHHHHHHHHHhcCC
Q 006606 204 ILVHCTHGHNRT-GYMIVHFLMRSQSM 229 (639)
Q Consensus 204 VlVHC~~G~~RT-G~li~aYLm~~~g~ 229 (639)
|+|+|..|. |+ +..++..| ...|+
T Consensus 74 ivvyC~~g~-r~~s~~a~~~L-~~~G~ 98 (124)
T 3flh_A 74 YVVYDWTGG-TTLGKTALLVL-LSAGF 98 (124)
T ss_dssp EEEECSSSS-CSHHHHHHHHH-HHHTC
T ss_pred EEEEeCCCC-chHHHHHHHHH-HHcCC
Confidence 999999995 65 34444444 44565
No 129
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=37.15 E-value=66 Score=25.31 Aligned_cols=29 Identities=17% Similarity=0.377 Sum_probs=19.0
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s 230 (639)
.++..|+|+|..|. ||. .++.+| ...|++
T Consensus 39 ~~~~~ivv~C~~g~-rs~-~aa~~L-~~~G~~ 67 (85)
T 2jtq_A 39 DKNDTVKVYCNAGR-QSG-QAKEIL-SEMGYT 67 (85)
T ss_dssp CTTSEEEEEESSSH-HHH-HHHHHH-HHTTCS
T ss_pred CCCCcEEEEcCCCc-hHH-HHHHHH-HHcCCC
Confidence 46789999999883 654 444444 445663
No 130
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=35.77 E-value=54 Score=32.71 Aligned_cols=86 Identities=15% Similarity=0.158 Sum_probs=44.7
Q ss_pred CCCCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 006606 122 GKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSK 201 (639)
Q Consensus 122 ~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~ 201 (639)
...-++.++.+.+. ..=..|||+.+. .++.. . +|| |--.+|- ..+..|...+...+. ..++
T Consensus 121 ~~~Is~~el~~ll~---~~~~vlIDVR~~------~Ey~~---G--HIp--GAiniP~-~~~~~~~~~l~~~l~--~~kd 181 (265)
T 4f67_A 121 GTYLSPEEWHQFIQ---DPNVILLDTRND------YEYEL---G--TFK--NAINPDI-ENFREFPDYVQRNLI--DKKD 181 (265)
T ss_dssp TCEECHHHHHHHTT---CTTSEEEECSCH------HHHHH---E--EET--TCBCCCC-SSGGGHHHHHHHHTG--GGTT
T ss_pred CceECHHHHHHHhc---CCCeEEEEeCCc------hHhhc---C--cCC--CCEeCCH-HHHHhhHHHHHHhhh--hCCC
Confidence 34456777776542 223468999843 34432 1 222 2212332 223333333333333 2467
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006606 202 KYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (639)
Q Consensus 202 ~~VlVHC~~G~~RTG~li~aYLm~~~g~ 229 (639)
..|+|+|+.|. ||. .++.+|.. .|+
T Consensus 182 k~IVvyC~~G~-RS~-~Aa~~L~~-~Gf 206 (265)
T 4f67_A 182 KKIAMFCTGGI-RCE-KTTAYMKE-LGF 206 (265)
T ss_dssp SCEEEECSSSH-HHH-HHHHHHHH-HTC
T ss_pred CeEEEEeCCCh-HHH-HHHHHHHH-cCC
Confidence 89999999874 654 55566655 455
No 131
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=32.74 E-value=39 Score=29.97 Aligned_cols=30 Identities=23% Similarity=0.228 Sum_probs=19.8
Q ss_pred ccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006606 198 KHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (639)
Q Consensus 198 ~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s 230 (639)
..++..|+|+|..| .||. .++ +++...|++
T Consensus 53 l~~~~~ivvyC~~g-~rs~-~aa-~~L~~~G~~ 82 (141)
T 3ilm_A 53 LEKSRDIYVYGAGD-EQTS-QAV-NLLRSAGFE 82 (141)
T ss_dssp SCTTSEEEEECSSH-HHHH-HHH-HHHHHTTCC
T ss_pred CCCCCeEEEEECCC-hHHH-HHH-HHHHHcCCC
Confidence 34678899999988 5665 344 444556763
No 132
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=31.99 E-value=72 Score=26.36 Aligned_cols=76 Identities=12% Similarity=0.304 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEE
Q 006606 126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYIL 205 (639)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~Vl 205 (639)
++.++.+.++. .+ ..|||+.. +.++... +|| |--.+|- ..+..+ +.+ ..++..|+
T Consensus 8 ~~~~l~~~~~~--~~-~~liDvR~------~~e~~~g-----hIp--gA~~ip~-~~l~~~-------~~~-l~~~~~iv 62 (108)
T 1gmx_A 8 NVADAHQKLQE--KE-AVLVDIRD------PQSFAMG-----HAV--QAFHLTN-DTLGAF-------MRD-NDFDTPVM 62 (108)
T ss_dssp CHHHHHHHHHT--TC-CEEEECSC------HHHHHHC-----EET--TCEECCH-HHHHHH-------HHH-SCTTSCEE
T ss_pred CHHHHHHHHhC--CC-CEEEEcCC------HHHHHhC-----CCc--cCEeCCH-HHHHHH-------HHh-cCCCCCEE
Confidence 46667665542 23 46999984 3455431 222 2223442 333332 322 34678999
Q ss_pred EEcCCCCChhHHHHHHHHHHhcCC
Q 006606 206 VHCTHGHNRTGYMIVHFLMRSQSM 229 (639)
Q Consensus 206 VHC~~G~~RTG~li~aYLm~~~g~ 229 (639)
|+|..|. ||. .++..| ...|+
T Consensus 63 vyc~~g~-rs~-~a~~~L-~~~G~ 83 (108)
T 1gmx_A 63 VMCYHGN-SSK-GAAQYL-LQQGY 83 (108)
T ss_dssp EECSSSS-HHH-HHHHHH-HHHTC
T ss_pred EEcCCCc-hHH-HHHHHH-HHcCC
Confidence 9999985 664 344444 44565
No 133
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=31.06 E-value=39 Score=33.12 Aligned_cols=30 Identities=20% Similarity=0.431 Sum_probs=20.0
Q ss_pred ccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006606 198 KHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (639)
Q Consensus 198 ~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s 230 (639)
..++..|+|+|..| .||. .++. ++...|++
T Consensus 220 ~~~~~~ivvyC~~G-~rs~-~a~~-~L~~~G~~ 249 (271)
T 1e0c_A 220 ITPDKEIVTHCQTH-HRSG-LTYL-IAKALGYP 249 (271)
T ss_dssp CCTTSEEEEECSSS-SHHH-HHHH-HHHHTTCS
T ss_pred CCCCCCEEEECCch-HHHH-HHHH-HHHHcCCC
Confidence 35678999999998 4764 3444 44456763
No 134
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=30.35 E-value=45 Score=27.69 Aligned_cols=29 Identities=21% Similarity=0.198 Sum_probs=18.7
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s 230 (639)
.++..|+|+|..| +||. .+ +.++...|++
T Consensus 50 ~~~~~ivvyc~~g-~rs~-~a-~~~L~~~G~~ 78 (106)
T 3hix_A 50 EKSRDIYVYGAGD-EQTS-QA-VNLLRSAGFE 78 (106)
T ss_dssp CTTSCEEEECSSH-HHHH-HH-HHHHHHTTCS
T ss_pred CCCCeEEEEECCC-ChHH-HH-HHHHHHcCCc
Confidence 4567899999988 4643 33 4444556763
No 135
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=27.62 E-value=59 Score=27.16 Aligned_cols=29 Identities=24% Similarity=0.446 Sum_probs=18.8
Q ss_pred ccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006606 198 KHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (639)
Q Consensus 198 ~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~ 229 (639)
..++..|+|+|..| .||. .++.+| ...|+
T Consensus 53 ~~~~~~ivvyC~~G-~rs~-~aa~~L-~~~G~ 81 (110)
T 2k0z_A 53 QHKDKKVLLHCRAG-RRAL-DAAKSM-HELGY 81 (110)
T ss_dssp SCSSSCEEEECSSS-HHHH-HHHHHH-HHTTC
T ss_pred cCCCCEEEEEeCCC-chHH-HHHHHH-HHCCC
Confidence 34678999999988 4664 344444 44554
No 136
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=25.97 E-value=93 Score=30.27 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=20.5
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s 230 (639)
.++..|+|+|..|..||.. +++++...|+.
T Consensus 79 ~~~~~vvvyc~~g~~~s~~--a~~~L~~~G~~ 108 (271)
T 1e0c_A 79 RPEAVYVVYDDEGGGWAGR--FIWLLDVIGQQ 108 (271)
T ss_dssp CTTCEEEEECSSSSHHHHH--HHHHHHHTTCC
T ss_pred CCCCeEEEEcCCCCccHHH--HHHHHHHcCCC
Confidence 4678999999998657653 34455556653
No 137
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=25.19 E-value=79 Score=32.71 Aligned_cols=82 Identities=16% Similarity=0.251 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHcCCCceEEEEcCCCC-C--------CC--CcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHH
Q 006606 126 SFKQVIHQLRVLGRKLGLVIDLTNTT-R--------YY--PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFL 194 (639)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~-~--------~y--~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi 194 (639)
+++.|+++++++|.++|+.++-.... . ++ +.+.+.+.||.|+|+-....+.. ..+..+ ..+.+.|
T Consensus 75 Gl~~l~~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~~~~---~~~~~y-~~~~~al 150 (362)
T 1uas_A 75 GIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGR---SVMERY-TRMSNAM 150 (362)
T ss_dssp CHHHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCCTTC---CHHHHH-HHHHHHH
T ss_pred cHHHHHHHHHHCCCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEEECccCCCCC---CHHHHH-HHHHHHH
Confidence 68999999999999999888864211 1 11 22457789999999877553222 223333 2334445
Q ss_pred HhcccCCCeEEEE-cCCCCCh
Q 006606 195 SRQKHSKKYILVH-CTHGHNR 214 (639)
Q Consensus 195 ~~~~~~~~~VlVH-C~~G~~R 214 (639)
. ..+..|+++ |..|-..
T Consensus 151 ~---~~~~~i~~~~c~~g~~~ 168 (362)
T 1uas_A 151 K---TYGKNIFFSLCEWGKEN 168 (362)
T ss_dssp H---HHCTTSEEEEESTTTTC
T ss_pred H---hhCCCcEEEecCCCCCC
Confidence 4 235567776 9877543
No 138
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=24.68 E-value=91 Score=26.40 Aligned_cols=27 Identities=26% Similarity=0.473 Sum_probs=17.3
Q ss_pred CC-CeEEEEcC-CCCChhHHHHHHHHHHhcCC
Q 006606 200 SK-KYILVHCT-HGHNRTGYMIVHFLMRSQSM 229 (639)
Q Consensus 200 ~~-~~VlVHC~-~G~~RTG~li~aYLm~~~g~ 229 (639)
++ ..|+|+|. .| .||. . +++++...|+
T Consensus 87 ~~~~~ivvyC~~~G-~rs~-~-a~~~L~~~G~ 115 (134)
T 3g5j_A 87 LNYDNIVIYCARGG-MRSG-S-IVNLLSSLGV 115 (134)
T ss_dssp TTCSEEEEECSSSS-HHHH-H-HHHHHHHTTC
T ss_pred cCCCeEEEEECCCC-hHHH-H-HHHHHHHcCC
Confidence 45 89999995 66 5665 3 4444455665
No 139
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=22.94 E-value=67 Score=31.60 Aligned_cols=28 Identities=21% Similarity=0.373 Sum_probs=18.9
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHH-hcCC
Q 006606 199 HSKKYILVHCTHGHNRTGYMIVHFLMR-SQSM 229 (639)
Q Consensus 199 ~~~~~VlVHC~~G~~RTG~li~aYLm~-~~g~ 229 (639)
..+..|+|+|..|. ||. .+ ++++. ..|+
T Consensus 231 ~~~~~ivvyC~~G~-rs~-~a-~~~L~~~~G~ 259 (285)
T 1uar_A 231 TKDKDIVVYCRIAE-RSS-HS-WFVLKYLLGY 259 (285)
T ss_dssp CTTSEEEEECSSHH-HHH-HH-HHHHHTTSCC
T ss_pred CCCCCEEEECCchH-HHH-HH-HHHHHHHcCC
Confidence 46789999999884 654 34 44444 5676
No 140
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=22.74 E-value=54 Score=30.04 Aligned_cols=24 Identities=21% Similarity=0.433 Sum_probs=17.2
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHH
Q 006606 201 KKYILVHCTHGHNRTGYMIVHFLMR 225 (639)
Q Consensus 201 ~~~VlVHC~~G~~RTG~li~aYLm~ 225 (639)
...|+|||..|-.|+... |.+|..
T Consensus 104 ~~~IVvyC~sG~~Rs~~a-a~~l~~ 127 (169)
T 3f4a_A 104 ALNVIFHCMLSQQRGPSA-AMLLLR 127 (169)
T ss_dssp CEEEEEECSSSSSHHHHH-HHHHHH
T ss_pred CCeEEEEeCCCCCcHHHH-HHHHHH
Confidence 368999999998888643 344543
No 141
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=22.31 E-value=82 Score=27.30 Aligned_cols=90 Identities=17% Similarity=0.278 Sum_probs=45.0
Q ss_pred CCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCc-EEEEeeccCCCC--CCCHHHHHHHHHHHHHHHHh-ccc
Q 006606 124 RYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI-KHVKIQCKGRDA--VPDNASVNNFVYEVTQFLSR-QKH 199 (639)
Q Consensus 124 ~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI-~y~~ip~~d~~~--~P~~~~i~~f~~~v~~fi~~-~~~ 199 (639)
.-++.++.+.+.....+ ..|||+... .++....| .-+++|...... .++.+.+. +.+.. ...
T Consensus 24 ~is~~el~~~l~~~~~~-~~liDvR~~------~e~~~ghIpgAinip~~~l~~~~~~~~~~~~-------~~~~~~~~~ 89 (139)
T 3d1p_A 24 SYSFEDMKRIVGKHDPN-VVLVDVREP------SEYSIVHIPASINVPYRSHPDAFALDPLEFE-------KQIGIPKPD 89 (139)
T ss_dssp ECCHHHHHHHHHHTCTT-EEEEECSCH------HHHHHCCCTTCEECCTTTCTTGGGSCHHHHH-------HHHSSCCCC
T ss_pred eecHHHHHHHHhCCCCC-eEEEECcCH------HHHhCCCCCCcEEcCHHHhhhhccCCHHHHH-------HHHhccCCC
Confidence 34677777766532223 469999843 34443222 224566643200 01111111 12211 124
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006606 200 SKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (639)
Q Consensus 200 ~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s 230 (639)
++..|+|+|..| .||. .++.+|. ..|++
T Consensus 90 ~~~~ivvyC~~G-~rs~-~aa~~L~-~~G~~ 117 (139)
T 3d1p_A 90 SAKELIFYCASG-KRGG-EAQKVAS-SHGYS 117 (139)
T ss_dssp TTSEEEEECSSS-HHHH-HHHHHHH-TTTCC
T ss_pred CCCeEEEECCCC-chHH-HHHHHHH-HcCCC
Confidence 578999999998 4654 4444444 45663
No 142
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=22.19 E-value=61 Score=27.40 Aligned_cols=23 Identities=30% Similarity=0.352 Sum_probs=16.2
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHh
Q 006606 202 KYILVHCTHGHNRTGYMIVHFLMRS 226 (639)
Q Consensus 202 ~~VlVHC~~G~~RTG~li~aYLm~~ 226 (639)
..|+|+|..| .||. .++.+|...
T Consensus 73 ~~ivv~C~~G-~rs~-~a~~~L~~~ 95 (127)
T 3i2v_A 73 VPIYVICKLG-NDSQ-KAVKILQSL 95 (127)
T ss_dssp EEEEEECSSS-SHHH-HHHHHHHHH
T ss_pred CeEEEEcCCC-CcHH-HHHHHHHHh
Confidence 4899999988 4665 555556554
No 143
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=22.11 E-value=96 Score=31.06 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=0.0
Q ss_pred HHHHHHHHh-cccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006606 188 YEVTQFLSR-QKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (639)
Q Consensus 188 ~~v~~fi~~-~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s 230 (639)
+.+.+.+.+ ...++..|+|+|..|. ||. .++.+++..|++
T Consensus 240 ~~l~~~~~~~~~~~~~~iv~yC~sG~-rs~--~a~~~L~~~G~~ 280 (302)
T 3olh_A 240 EEIRHLFQEKKVDLSKPLVATCGSGV-TAC--HVALGAYLCGKP 280 (302)
T ss_dssp HHHHHHHHHTTCCTTSCEEEECSSSS-TTH--HHHHHHHTTTCC
T ss_pred HHHHHHHHhcCCCCCCCEEEECCChH-HHH--HHHHHHHHcCCC
No 144
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=21.92 E-value=1.7e+02 Score=26.15 Aligned_cols=81 Identities=6% Similarity=0.080 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCc-EEEEeeccCCCCCCCHHHHHHHHHHH-HHHHHhcccCCC
Q 006606 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI-KHVKIQCKGRDAVPDNASVNNFVYEV-TQFLSRQKHSKK 202 (639)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI-~y~~ip~~d~~~~P~~~~i~~f~~~v-~~fi~~~~~~~~ 202 (639)
.++.++.+.++..+.+ ..|||+... ++|....| .-+.+|..........+.+...+... ...+. ......
T Consensus 22 is~~~l~~~l~~~~~~-~~liDvR~~------~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~-~~~~~~ 93 (157)
T 2gwf_A 22 ITAKELYTMMTDKNIS-LIIMDARRM------QDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWK-KRGNVE 93 (157)
T ss_dssp ECHHHHHHHHHSTTSC-EEEEECSCH------HHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHH-TTTTSS
T ss_pred cCHHHHHHHHhcCCCC-eEEEECCCH------HHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHH-hcCCCC
Confidence 4677787766532123 369999843 34444333 23446653210000123333322111 11111 122345
Q ss_pred eEEEEcCCCCC
Q 006606 203 YILVHCTHGHN 213 (639)
Q Consensus 203 ~VlVHC~~G~~ 213 (639)
.|+|+|..|-.
T Consensus 94 ~VVvy~~~~~~ 104 (157)
T 2gwf_A 94 YVVLLDWFSSA 104 (157)
T ss_dssp EEEEECSSCCG
T ss_pred EEEEEcCCCCc
Confidence 69999988854
No 145
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=21.21 E-value=3.7e+02 Score=22.63 Aligned_cols=73 Identities=14% Similarity=0.274 Sum_probs=43.5
Q ss_pred HHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcC
Q 006606 130 VIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCT 209 (639)
Q Consensus 130 l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~ 209 (639)
+.+.++..|..+. ++|+... +++++.+...-.+-.|+-+.+..|+ ..+..|++.+.. . -++++++|-|+
T Consensus 19 ia~~l~~~g~~v~-~~~~~~~----~~~~l~~~d~iiig~pty~~g~~p~-~~~~~fl~~l~~----~-l~~k~~~~f~t 87 (138)
T 5nul_A 19 IAKGIIESGKDVN-TINVSDV----NIDELLNEDILILGCSAMTDEVLEE-SEFEPFIEEIST----K-ISGKKVALFGS 87 (138)
T ss_dssp HHHHHHHTTCCCE-EEEGGGC----CHHHHTTCSEEEEEECCBTTTBCCT-TTHHHHHHHHGG----G-CTTCEEEEEEE
T ss_pred HHHHHHHCCCeEE-EEEhhhC----CHHHHhhCCEEEEEcCccCCCCCCh-HHHHHHHHHHHh----h-cCCCEEEEEEe
Confidence 4444555565554 7788643 3455666666677788876544453 245666654321 1 36788888888
Q ss_pred CCCC
Q 006606 210 HGHN 213 (639)
Q Consensus 210 ~G~~ 213 (639)
+|-+
T Consensus 88 ~g~~ 91 (138)
T 5nul_A 88 YGWG 91 (138)
T ss_dssp ESSS
T ss_pred cCCC
Confidence 7754
No 146
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=20.43 E-value=1.2e+02 Score=27.07 Aligned_cols=84 Identities=6% Similarity=0.066 Sum_probs=38.4
Q ss_pred CCCCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCc-EEEEeeccCCCCCCCHHHHHHHHHHH-HHHHHhccc
Q 006606 122 GKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI-KHVKIQCKGRDAVPDNASVNNFVYEV-TQFLSRQKH 199 (639)
Q Consensus 122 ~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI-~y~~ip~~d~~~~P~~~~i~~f~~~v-~~fi~~~~~ 199 (639)
....++.++.+.++..+.+ ..|||+... ++|....| .-+++|.......-..+.+...+... ...+. ...
T Consensus 14 ~~~i~~~~l~~~l~~~~~~-~~liDvR~~------~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~~~~~~-~~~ 85 (157)
T 1whb_A 14 KGAITAKELYTMMTDKNIS-LIIMDARRM------QDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWK-KRG 85 (157)
T ss_dssp CSEECHHHHHHHHTCSSSC-EEEEEESCH------HHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTHHHHHH-GGG
T ss_pred CCccCHHHHHHHHhcCCCC-eEEEECCCH------HHHHhccccCCcccCHHHccCCCcHHHHHHHCChHHHHHHH-hcC
Confidence 3345678887766422113 469999843 34443333 23456653210000122232221110 11111 122
Q ss_pred CCCeEEEEcCCCCC
Q 006606 200 SKKYILVHCTHGHN 213 (639)
Q Consensus 200 ~~~~VlVHC~~G~~ 213 (639)
....|+|||..|-.
T Consensus 86 ~~~~VVvy~~~~~~ 99 (157)
T 1whb_A 86 NVEYVVLLDWFSSA 99 (157)
T ss_dssp TSSEEEEECSSCCG
T ss_pred CCCEEEEECCCCCc
Confidence 34569999988854
Done!