Query 006607
Match_columns 639
No_of_seqs 351 out of 1442
Neff 5.4
Searched_HMMs 46136
Date Thu Mar 28 11:52:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006607.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006607hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02869 fatty aldehyde decarb 100.0 2E-189 3E-194 1546.7 47.5 606 12-638 12-619 (620)
2 PF12076 Wax2_C: WAX2 C-termin 100.0 1.9E-67 4E-72 495.8 11.6 164 466-634 1-164 (164)
3 PRK14982 acyl-ACP reductase; P 100.0 1.5E-36 3.2E-41 322.5 19.8 263 357-636 35-338 (340)
4 COG5322 Predicted dehydrogenas 100.0 6.4E-37 1.4E-41 309.5 15.9 234 388-636 85-351 (351)
5 KOG0873 C-4 sterol methyl oxid 100.0 9E-35 2E-39 296.9 13.2 216 49-277 34-260 (283)
6 COG3000 ERG3 Sterol desaturase 99.9 3E-26 6.5E-31 237.5 15.5 152 127-287 94-247 (271)
7 KOG0872 Sterol C5 desaturase [ 99.9 8.7E-22 1.9E-26 199.4 10.9 143 127-283 127-269 (312)
8 KOG0874 Sphingolipid hydroxyla 99.8 4.5E-22 9.7E-27 195.9 1.6 147 128-284 122-273 (287)
9 PF04116 FA_hydroxylase: Fatty 99.7 6.1E-17 1.3E-21 144.6 7.9 111 134-254 3-114 (114)
10 cd01078 NAD_bind_H4MPT_DH NADP 99.3 8.1E-12 1.8E-16 122.8 10.8 166 445-630 1-194 (194)
11 PLN02434 fatty acid hydroxylas 99.1 3E-09 6.4E-14 108.7 15.8 136 128-277 83-230 (237)
12 KOG0539 Sphingolipid fatty aci 97.8 4.4E-05 9.5E-10 76.4 7.1 136 130-278 85-234 (240)
13 PLN02601 beta-carotene hydroxy 97.5 0.00094 2E-08 69.3 11.4 132 118-265 126-272 (303)
14 PF01488 Shikimate_DH: Shikima 97.3 0.00045 9.8E-09 64.7 6.5 92 462-558 11-113 (135)
15 COG0300 DltE Short-chain dehyd 97.2 0.00058 1.2E-08 71.5 6.9 49 461-511 4-54 (265)
16 COG4221 Short-chain alcohol de 97.1 0.00064 1.4E-08 70.1 5.5 44 464-509 7-52 (246)
17 KOG1014 17 beta-hydroxysteroid 97.0 0.00087 1.9E-08 71.2 5.4 47 464-512 50-98 (312)
18 PRK00258 aroE shikimate 5-dehy 96.9 0.002 4.3E-08 67.5 7.5 125 444-574 103-248 (278)
19 TIGR00507 aroE shikimate 5-deh 96.9 0.0023 5.1E-08 66.6 7.5 135 445-588 99-252 (270)
20 PLN00203 glutamyl-tRNA reducta 96.9 0.0054 1.2E-07 70.0 10.7 212 395-628 199-449 (519)
21 PRK07424 bifunctional sterol d 96.8 0.004 8.6E-08 69.1 8.6 135 137-275 17-174 (406)
22 PRK00045 hemA glutamyl-tRNA re 96.7 0.0029 6.2E-08 70.3 6.9 152 461-628 180-360 (423)
23 PRK08618 ornithine cyclodeamin 96.6 0.012 2.6E-07 63.2 10.7 140 409-552 64-220 (325)
24 COG0169 AroE Shikimate 5-dehyd 96.6 0.0052 1.1E-07 65.1 7.1 154 444-605 105-281 (283)
25 PF13460 NAD_binding_10: NADH( 96.5 0.0048 1E-07 59.1 6.2 35 466-502 1-37 (183)
26 cd01065 NAD_bind_Shikimate_DH 96.4 0.012 2.6E-07 55.2 7.7 123 446-573 2-142 (155)
27 TIGR02853 spore_dpaA dipicolin 96.2 0.023 5E-07 60.2 9.8 124 405-553 108-240 (287)
28 PLN03209 translocon at the inn 96.2 0.013 2.8E-07 67.5 8.3 59 447-507 59-124 (576)
29 PRK13940 glutamyl-tRNA reducta 96.1 0.0072 1.6E-07 67.2 5.5 210 395-629 116-354 (414)
30 KOG1370 S-adenosylhomocysteine 96.1 0.017 3.8E-07 61.4 7.9 151 463-623 214-395 (434)
31 PF02423 OCD_Mu_crystall: Orni 96.0 0.029 6.3E-07 60.0 9.4 140 408-554 64-225 (313)
32 PRK06407 ornithine cyclodeamin 96.0 0.036 7.8E-07 59.1 10.0 132 409-553 62-212 (301)
33 PRK09186 flagellin modificatio 96.0 0.014 3.1E-07 58.6 6.6 44 463-508 4-49 (256)
34 TIGR02371 ala_DH_arch alanine 96.0 0.065 1.4E-06 57.7 11.8 140 408-554 64-223 (325)
35 PRK07340 ornithine cyclodeamin 96.0 0.051 1.1E-06 57.9 10.9 139 408-554 61-218 (304)
36 CHL00194 ycf39 Ycf39; Provisio 95.9 0.013 2.9E-07 61.7 6.4 61 465-546 2-64 (317)
37 PRK06949 short chain dehydroge 95.9 0.016 3.4E-07 58.3 6.5 46 460-507 6-53 (258)
38 PRK12548 shikimate 5-dehydroge 95.9 0.021 4.6E-07 60.3 7.4 62 445-509 108-175 (289)
39 cd01080 NAD_bind_m-THF_DH_Cycl 95.9 0.024 5.2E-07 55.6 7.3 85 449-558 28-120 (168)
40 PF00670 AdoHcyase_NAD: S-aden 95.8 0.021 4.6E-07 55.8 6.6 88 462-558 22-115 (162)
41 PRK06482 short chain dehydroge 95.8 0.021 4.6E-07 58.4 6.9 43 464-508 3-47 (276)
42 PRK05867 short chain dehydroge 95.8 0.018 3.8E-07 58.2 6.2 45 462-508 8-54 (253)
43 cd05213 NAD_bind_Glutamyl_tRNA 95.8 0.017 3.7E-07 61.6 6.3 146 397-558 115-277 (311)
44 PRK08306 dipicolinate synthase 95.8 0.03 6.5E-07 59.5 8.0 87 462-557 151-244 (296)
45 PRK08339 short chain dehydroge 95.7 0.017 3.6E-07 59.3 5.9 45 463-509 8-54 (263)
46 PRK08265 short chain dehydroge 95.7 0.024 5.3E-07 57.8 7.0 44 463-508 6-51 (261)
47 PRK08063 enoyl-(acyl carrier p 95.7 0.019 4.2E-07 57.4 6.1 42 464-507 5-49 (250)
48 PRK06141 ornithine cyclodeamin 95.7 0.077 1.7E-06 56.8 10.8 139 408-553 61-219 (314)
49 COG1086 Predicted nucleoside-d 95.7 0.048 1E-06 62.4 9.6 146 362-546 146-323 (588)
50 PRK12549 shikimate 5-dehydroge 95.7 0.026 5.6E-07 59.7 7.0 127 445-574 109-254 (284)
51 PRK07454 short chain dehydroge 95.6 0.024 5.2E-07 56.6 6.2 43 463-507 6-50 (241)
52 PRK07523 gluconate 5-dehydroge 95.5 0.028 6E-07 56.8 6.6 45 462-508 9-55 (255)
53 PRK06196 oxidoreductase; Provi 95.5 0.024 5.3E-07 59.6 6.4 56 451-508 14-71 (315)
54 PRK06823 ornithine cyclodeamin 95.5 0.12 2.7E-06 55.5 11.6 139 409-554 64-223 (315)
55 PRK06046 alanine dehydrogenase 95.5 0.11 2.4E-06 55.9 11.1 141 408-554 65-224 (326)
56 PRK06924 short chain dehydroge 95.5 0.031 6.7E-07 56.1 6.5 41 464-506 2-45 (251)
57 PRK07478 short chain dehydroge 95.4 0.029 6.4E-07 56.5 6.2 44 463-508 6-51 (254)
58 PRK12429 3-hydroxybutyrate deh 95.4 0.031 6.8E-07 55.9 6.2 42 464-507 5-48 (258)
59 PRK07589 ornithine cyclodeamin 95.4 0.11 2.4E-06 56.7 10.7 139 408-553 65-225 (346)
60 PF03446 NAD_binding_2: NAD bi 95.3 0.0097 2.1E-07 57.3 2.3 102 464-575 2-124 (163)
61 PRK07326 short chain dehydroge 95.3 0.036 7.8E-07 55.0 6.3 45 463-509 6-52 (237)
62 TIGR01963 PHB_DH 3-hydroxybuty 95.3 0.032 6.9E-07 55.8 5.9 42 464-507 2-45 (255)
63 TIGR00518 alaDH alanine dehydr 95.3 0.091 2E-06 57.6 9.9 92 463-558 167-271 (370)
64 PRK08267 short chain dehydroge 95.3 0.039 8.5E-07 55.8 6.6 43 464-508 2-46 (260)
65 PRK07067 sorbitol dehydrogenas 95.3 0.041 8.8E-07 55.6 6.7 44 463-508 6-51 (257)
66 PRK08643 acetoin reductase; Va 95.2 0.035 7.6E-07 55.9 6.2 43 464-508 3-47 (256)
67 PRK07890 short chain dehydroge 95.2 0.033 7.1E-07 56.0 5.9 44 463-508 5-50 (258)
68 PRK07109 short chain dehydroge 95.2 0.037 8E-07 59.3 6.5 45 462-508 7-53 (334)
69 PRK06194 hypothetical protein; 95.2 0.036 7.8E-07 56.9 6.1 43 464-508 7-51 (287)
70 PLN02780 ketoreductase/ oxidor 95.2 0.023 5E-07 60.6 4.9 45 463-509 53-99 (320)
71 PRK06200 2,3-dihydroxy-2,3-dih 95.2 0.044 9.5E-07 55.7 6.7 44 463-508 6-51 (263)
72 PTZ00075 Adenosylhomocysteinas 95.2 0.084 1.8E-06 59.7 9.4 141 460-612 251-419 (476)
73 PRK07231 fabG 3-ketoacyl-(acyl 95.2 0.049 1.1E-06 54.3 6.9 44 463-508 5-50 (251)
74 PRK09291 short chain dehydroge 95.1 0.043 9.4E-07 55.1 6.3 41 464-506 3-45 (257)
75 PRK06180 short chain dehydroge 95.1 0.054 1.2E-06 55.7 7.0 43 463-507 4-48 (277)
76 PRK08085 gluconate 5-dehydroge 95.1 0.051 1.1E-06 54.8 6.7 45 462-508 8-54 (254)
77 PRK06139 short chain dehydroge 95.0 0.038 8.3E-07 59.3 6.0 44 463-508 7-52 (330)
78 COG0373 HemA Glutamyl-tRNA red 95.0 0.03 6.4E-07 62.3 5.2 89 462-558 177-278 (414)
79 PRK06124 gluconate 5-dehydroge 95.0 0.047 1E-06 55.0 6.3 45 461-507 9-55 (256)
80 PRK06199 ornithine cyclodeamin 95.0 0.15 3.2E-06 56.3 10.6 155 409-569 92-278 (379)
81 PRK05717 oxidoreductase; Valid 95.0 0.065 1.4E-06 54.2 7.3 44 462-507 9-54 (255)
82 PRK14175 bifunctional 5,10-met 95.0 0.072 1.6E-06 56.6 7.8 150 393-566 44-245 (286)
83 PRK06101 short chain dehydroge 95.0 0.035 7.6E-07 55.8 5.3 41 464-506 2-44 (240)
84 PRK05866 short chain dehydroge 95.0 0.053 1.1E-06 56.8 6.7 43 463-507 40-84 (293)
85 PRK06500 short chain dehydroge 95.0 0.06 1.3E-06 53.7 6.8 44 463-508 6-51 (249)
86 PRK07774 short chain dehydroge 94.9 0.056 1.2E-06 54.0 6.5 43 463-507 6-50 (250)
87 PRK08213 gluconate 5-dehydroge 94.9 0.055 1.2E-06 54.7 6.4 43 463-507 12-56 (259)
88 TIGR03325 BphB_TodD cis-2,3-di 94.9 0.064 1.4E-06 54.5 6.9 43 463-507 5-49 (262)
89 PRK10538 malonic semialdehyde 94.9 0.06 1.3E-06 54.3 6.7 42 465-508 2-45 (248)
90 PRK12826 3-ketoacyl-(acyl-carr 94.9 0.051 1.1E-06 54.1 6.0 43 463-507 6-50 (251)
91 TIGR02415 23BDH acetoin reduct 94.8 0.052 1.1E-06 54.4 6.0 42 464-507 1-44 (254)
92 COG0702 Predicted nucleoside-d 94.8 0.053 1.1E-06 54.7 6.1 38 465-504 2-41 (275)
93 PRK14192 bifunctional 5,10-met 94.8 0.11 2.4E-06 55.1 8.7 126 389-557 100-234 (283)
94 PRK08416 7-alpha-hydroxysteroi 94.8 0.053 1.1E-06 55.2 5.9 44 463-508 8-54 (260)
95 PRK07097 gluconate 5-dehydroge 94.8 0.064 1.4E-06 54.6 6.5 48 459-508 6-55 (265)
96 PRK07102 short chain dehydroge 94.7 0.057 1.2E-06 54.1 6.0 42 464-507 2-45 (243)
97 PRK05653 fabG 3-ketoacyl-(acyl 94.7 0.061 1.3E-06 53.1 6.1 42 464-507 6-49 (246)
98 COG2423 Predicted ornithine cy 94.7 0.15 3.2E-06 55.4 9.4 157 408-571 66-251 (330)
99 PLN02968 Probable N-acetyl-gam 94.7 0.061 1.3E-06 59.3 6.6 137 462-606 37-195 (381)
100 PLN02896 cinnamyl-alcohol dehy 94.7 0.085 1.8E-06 56.4 7.5 48 457-506 4-53 (353)
101 PRK08251 short chain dehydroge 94.7 0.074 1.6E-06 53.2 6.6 43 464-508 3-47 (248)
102 PRK07825 short chain dehydroge 94.7 0.047 1E-06 55.7 5.3 44 463-508 5-50 (273)
103 PRK07063 short chain dehydroge 94.6 0.041 8.9E-07 55.7 4.8 45 463-509 7-53 (260)
104 PRK05476 S-adenosyl-L-homocyst 94.6 0.16 3.6E-06 56.7 9.8 138 460-609 209-373 (425)
105 PLN02986 cinnamyl-alcohol dehy 94.6 0.061 1.3E-06 56.5 6.2 38 464-503 6-45 (322)
106 KOG1208 Dehydrogenases with di 94.6 0.049 1.1E-06 58.5 5.4 53 455-509 27-81 (314)
107 PRK07677 short chain dehydroge 94.6 0.07 1.5E-06 53.8 6.2 43 464-508 2-46 (252)
108 PF05368 NmrA: NmrA-like famil 94.6 0.06 1.3E-06 53.9 5.7 39 466-506 1-43 (233)
109 PRK09072 short chain dehydroge 94.6 0.081 1.7E-06 53.7 6.7 43 463-507 5-49 (263)
110 PRK05854 short chain dehydroge 94.6 0.045 9.7E-07 57.9 5.0 44 463-508 14-59 (313)
111 PRK05557 fabG 3-ketoacyl-(acyl 94.5 0.082 1.8E-06 52.3 6.5 43 463-507 5-50 (248)
112 PRK07024 short chain dehydroge 94.5 0.06 1.3E-06 54.6 5.6 44 464-509 3-48 (257)
113 PRK05876 short chain dehydroge 94.5 0.075 1.6E-06 55.0 6.4 44 463-508 6-51 (275)
114 PRK12939 short chain dehydroge 94.5 0.08 1.7E-06 52.7 6.4 43 463-507 7-51 (250)
115 PRK07453 protochlorophyllide o 94.5 0.081 1.7E-06 55.8 6.7 44 463-508 6-51 (322)
116 PRK06947 glucose-1-dehydrogena 94.5 0.076 1.7E-06 53.1 6.3 42 464-507 3-47 (248)
117 PF00106 adh_short: short chai 94.5 0.07 1.5E-06 49.9 5.6 43 464-508 1-48 (167)
118 TIGR01472 gmd GDP-mannose 4,6- 94.5 0.044 9.5E-07 58.3 4.7 29 464-494 1-29 (343)
119 PRK06172 short chain dehydroge 94.4 0.08 1.7E-06 53.2 6.2 43 463-507 7-51 (253)
120 PRK13394 3-hydroxybutyrate deh 94.4 0.084 1.8E-06 53.1 6.4 43 463-507 7-51 (262)
121 PRK12550 shikimate 5-dehydroge 94.4 0.1 2.2E-06 55.0 7.2 61 444-508 104-167 (272)
122 cd05212 NAD_bind_m-THF_DH_Cycl 94.4 0.14 3E-06 49.0 7.4 71 458-553 23-100 (140)
123 PRK12746 short chain dehydroge 94.4 0.086 1.9E-06 53.0 6.4 42 464-507 7-51 (254)
124 PRK06138 short chain dehydroge 94.4 0.096 2.1E-06 52.4 6.7 44 463-508 5-50 (252)
125 PRK08340 glucose-1-dehydrogena 94.4 0.052 1.1E-06 55.1 4.8 42 465-508 2-45 (259)
126 PRK07074 short chain dehydroge 94.4 0.093 2E-06 52.9 6.6 43 464-508 3-47 (257)
127 COG2910 Putative NADH-flavin r 94.4 0.1 2.3E-06 52.2 6.7 142 465-610 2-202 (211)
128 PRK12384 sorbitol-6-phosphate 94.4 0.08 1.7E-06 53.4 6.1 42 464-507 3-46 (259)
129 PRK08277 D-mannonate oxidoredu 94.4 0.079 1.7E-06 54.2 6.2 44 463-508 10-55 (278)
130 PRK08589 short chain dehydroge 94.4 0.075 1.6E-06 54.6 6.0 43 463-508 6-50 (272)
131 PRK05993 short chain dehydroge 94.4 0.06 1.3E-06 55.5 5.3 42 463-506 4-47 (277)
132 PRK06935 2-deoxy-D-gluconate 3 94.3 0.093 2E-06 53.1 6.5 44 461-507 13-58 (258)
133 PRK07831 short chain dehydroge 94.3 0.084 1.8E-06 53.6 6.2 45 463-508 17-63 (262)
134 PRK05884 short chain dehydroge 94.3 0.064 1.4E-06 53.7 5.1 41 465-507 2-44 (223)
135 PRK05872 short chain dehydroge 94.3 0.076 1.7E-06 55.5 5.9 46 462-509 8-55 (296)
136 PRK06125 short chain dehydroge 94.2 0.084 1.8E-06 53.5 6.0 45 463-509 7-53 (259)
137 TIGR03206 benzo_BadH 2-hydroxy 94.2 0.096 2.1E-06 52.3 6.3 43 463-507 3-47 (250)
138 PRK05650 short chain dehydroge 94.2 0.093 2E-06 53.6 6.3 41 465-507 2-44 (270)
139 PRK07814 short chain dehydroge 94.2 0.1 2.3E-06 53.1 6.6 44 462-507 9-54 (263)
140 PRK06197 short chain dehydroge 94.2 0.088 1.9E-06 55.0 6.1 44 462-507 15-60 (306)
141 PRK08017 oxidoreductase; Provi 94.1 0.072 1.6E-06 53.5 5.2 40 464-505 3-44 (256)
142 PRK05599 hypothetical protein; 94.1 0.088 1.9E-06 53.4 5.9 42 465-509 2-45 (246)
143 PRK07062 short chain dehydroge 94.1 0.063 1.4E-06 54.5 4.8 46 462-509 7-54 (265)
144 PRK12749 quinate/shikimate deh 94.1 0.13 2.9E-06 54.5 7.4 168 383-574 63-260 (288)
145 KOG1205 Predicted dehydrogenas 94.1 0.062 1.3E-06 57.0 4.8 44 462-507 11-56 (282)
146 TIGR00561 pntA NAD(P) transhyd 94.1 0.14 3.1E-06 58.5 8.0 181 406-608 104-337 (511)
147 PRK07666 fabG 3-ketoacyl-(acyl 94.1 0.12 2.5E-06 51.6 6.5 43 463-507 7-51 (239)
148 PF02719 Polysacc_synt_2: Poly 94.1 0.065 1.4E-06 57.1 5.0 78 466-553 1-86 (293)
149 PRK09135 pteridine reductase; 94.1 0.1 2.2E-06 51.8 6.2 43 463-507 6-51 (249)
150 PRK07775 short chain dehydroge 94.0 0.12 2.6E-06 53.2 6.7 44 462-507 9-54 (274)
151 PRK12829 short chain dehydroge 94.0 0.079 1.7E-06 53.3 5.3 45 462-508 10-56 (264)
152 PRK14179 bifunctional 5,10-met 94.0 0.077 1.7E-06 56.4 5.2 148 394-567 45-246 (284)
153 PRK12936 3-ketoacyl-(acyl-carr 94.0 0.14 3E-06 50.9 6.8 43 463-507 6-50 (245)
154 PRK06484 short chain dehydroge 94.0 0.12 2.6E-06 58.1 7.1 46 462-509 268-315 (520)
155 TIGR02992 ectoine_eutC ectoine 93.9 0.14 3.1E-06 55.0 7.3 117 430-553 86-224 (326)
156 PF10520 Kua-UEV1_localn: Kua- 93.9 0.15 3.3E-06 50.6 6.9 54 215-273 99-155 (178)
157 TIGR01035 hemA glutamyl-tRNA r 93.9 0.12 2.6E-06 57.6 6.8 151 462-628 179-357 (417)
158 TIGR01809 Shik-DH-AROM shikima 93.9 0.16 3.4E-06 53.6 7.4 125 445-574 105-258 (282)
159 PLN02253 xanthoxin dehydrogena 93.9 0.12 2.6E-06 53.0 6.3 45 463-509 18-64 (280)
160 PRK06182 short chain dehydroge 93.9 0.094 2E-06 53.7 5.5 41 463-505 3-45 (273)
161 PRK06057 short chain dehydroge 93.8 0.095 2.1E-06 53.0 5.5 44 463-508 7-52 (255)
162 PRK08642 fabG 3-ketoacyl-(acyl 93.8 0.16 3.5E-06 50.8 6.9 44 463-508 5-51 (253)
163 PRK06181 short chain dehydroge 93.8 0.13 2.8E-06 52.0 6.4 42 464-507 2-45 (263)
164 PRK07576 short chain dehydroge 93.8 0.14 3E-06 52.4 6.6 44 462-507 8-53 (264)
165 PRK12825 fabG 3-ketoacyl-(acyl 93.8 0.13 2.7E-06 50.9 6.1 41 464-506 7-50 (249)
166 PLN02583 cinnamoyl-CoA reducta 93.8 0.17 3.7E-06 53.0 7.3 31 462-494 5-35 (297)
167 PRK07806 short chain dehydroge 93.7 0.13 2.8E-06 51.5 6.1 43 463-507 6-51 (248)
168 PRK08862 short chain dehydroge 93.7 0.099 2.2E-06 52.8 5.2 43 463-507 5-49 (227)
169 PRK12742 oxidoreductase; Provi 93.7 0.11 2.4E-06 51.5 5.4 44 463-508 6-52 (237)
170 PF01210 NAD_Gly3P_dh_N: NAD-d 93.6 0.18 3.9E-06 48.3 6.7 63 465-531 1-75 (157)
171 PLN00198 anthocyanidin reducta 93.6 0.14 3E-06 54.3 6.4 42 459-502 5-48 (338)
172 PRK12828 short chain dehydroge 93.6 0.1 2.2E-06 51.4 5.2 42 463-506 7-50 (239)
173 PRK08628 short chain dehydroge 93.6 0.14 3E-06 51.7 6.2 43 461-506 5-49 (258)
174 PRK08703 short chain dehydroge 93.6 0.093 2E-06 52.4 4.9 43 463-507 6-50 (239)
175 PLN02616 tetrahydrofolate dehy 93.6 0.22 4.8E-06 54.5 7.9 140 392-557 114-306 (364)
176 TIGR01289 LPOR light-dependent 93.5 0.18 3.9E-06 53.4 7.1 44 463-508 3-49 (314)
177 PRK00676 hemA glutamyl-tRNA re 93.5 0.11 2.5E-06 56.4 5.6 91 395-497 110-208 (338)
178 PRK05875 short chain dehydroge 93.5 0.13 2.8E-06 52.6 5.8 44 462-507 6-51 (276)
179 PRK08263 short chain dehydroge 93.4 0.12 2.7E-06 52.9 5.6 43 464-508 4-48 (275)
180 PRK08303 short chain dehydroge 93.4 0.14 2.9E-06 54.3 6.0 43 463-507 8-62 (305)
181 TIGR03589 PseB UDP-N-acetylglu 93.4 0.17 3.7E-06 53.7 6.8 42 464-507 5-50 (324)
182 PRK08177 short chain dehydroge 93.4 0.11 2.3E-06 51.7 4.8 40 464-505 2-43 (225)
183 TIGR01832 kduD 2-deoxy-D-gluco 93.3 0.16 3.6E-06 50.7 6.0 31 462-494 4-34 (248)
184 PLN02662 cinnamyl-alcohol dehy 93.3 0.13 2.9E-06 53.6 5.5 34 464-499 5-40 (322)
185 PRK08945 putative oxoacyl-(acy 93.2 0.11 2.4E-06 52.1 4.7 45 462-508 11-57 (247)
186 PLN02494 adenosylhomocysteinas 93.2 0.72 1.6E-05 52.4 11.4 157 441-610 231-418 (477)
187 PRK09134 short chain dehydroge 93.2 0.21 4.5E-06 50.6 6.7 44 462-507 8-54 (258)
188 PRK07035 short chain dehydroge 93.2 0.14 3E-06 51.5 5.3 44 463-508 8-53 (252)
189 PRK05786 fabG 3-ketoacyl-(acyl 93.2 0.14 3E-06 50.8 5.3 43 463-507 5-49 (238)
190 PLN02427 UDP-apiose/xylose syn 93.1 0.2 4.3E-06 54.3 6.8 43 460-504 11-56 (386)
191 PRK07832 short chain dehydroge 93.1 0.14 3E-06 52.5 5.3 42 464-507 1-44 (272)
192 PRK14027 quinate/shikimate deh 93.1 0.29 6.3E-06 51.8 7.9 63 445-510 109-174 (283)
193 PRK00066 ldh L-lactate dehydro 93.1 0.092 2E-06 56.3 4.2 68 461-531 4-79 (315)
194 PRK06953 short chain dehydroge 93.1 0.13 2.9E-06 50.8 5.0 40 464-505 2-43 (222)
195 PRK06914 short chain dehydroge 93.1 0.14 3.1E-06 52.3 5.4 42 464-507 4-47 (280)
196 PRK12827 short chain dehydroge 93.1 0.2 4.3E-06 49.7 6.3 43 463-507 6-54 (249)
197 PRK05693 short chain dehydroge 93.1 0.14 3E-06 52.4 5.3 41 464-506 2-44 (274)
198 PRK07985 oxidoreductase; Provi 93.1 0.18 3.8E-06 52.8 6.1 42 463-506 49-94 (294)
199 PLN02650 dihydroflavonol-4-red 93.1 0.18 3.9E-06 53.8 6.2 42 462-505 4-47 (351)
200 PRK12937 short chain dehydroge 93.0 0.23 5E-06 49.4 6.6 43 463-507 5-50 (245)
201 PRK08278 short chain dehydroge 93.0 0.17 3.6E-06 52.2 5.7 34 463-498 6-41 (273)
202 PRK12743 oxidoreductase; Provi 92.9 0.2 4.4E-06 50.7 6.2 42 464-507 3-47 (256)
203 PRK07060 short chain dehydroge 92.9 0.19 4.1E-06 50.0 5.8 44 462-507 8-53 (245)
204 COG0451 WcaG Nucleoside-diphos 92.9 0.063 1.4E-06 55.3 2.5 101 465-601 2-108 (314)
205 PRK08690 enoyl-(acyl carrier p 92.9 0.22 4.7E-06 51.1 6.3 32 463-494 6-37 (261)
206 TIGR00936 ahcY adenosylhomocys 92.9 0.45 9.8E-06 53.0 9.2 157 441-610 172-357 (406)
207 PRK09242 tropinone reductase; 92.9 0.14 3.1E-06 51.6 4.9 43 463-507 9-53 (257)
208 PLN02686 cinnamoyl-CoA reducta 92.8 0.22 4.8E-06 54.0 6.7 42 461-504 51-94 (367)
209 PRK06123 short chain dehydroge 92.8 0.21 4.6E-06 49.9 6.0 42 464-507 3-47 (248)
210 PRK14190 bifunctional 5,10-met 92.8 0.21 4.6E-06 53.0 6.3 148 393-566 44-245 (284)
211 PRK08291 ectoine utilization p 92.8 0.29 6.3E-06 52.7 7.5 103 445-553 106-227 (330)
212 PRK06128 oxidoreductase; Provi 92.8 0.19 4.1E-06 52.5 5.9 30 463-494 55-84 (300)
213 PRK14194 bifunctional 5,10-met 92.8 0.26 5.6E-06 52.8 6.8 161 393-579 45-267 (301)
214 PRK12481 2-deoxy-D-gluconate 3 92.8 0.19 4.2E-06 51.0 5.7 31 462-494 7-37 (251)
215 PRK09730 putative NAD(P)-bindi 92.7 0.24 5.1E-06 49.3 6.2 41 464-506 2-45 (247)
216 PRK14178 bifunctional 5,10-met 92.6 0.39 8.4E-06 51.0 7.9 141 393-557 38-227 (279)
217 PF02826 2-Hacid_dh_C: D-isome 92.6 0.22 4.8E-06 48.7 5.7 86 462-558 35-135 (178)
218 PRK07904 short chain dehydroge 92.6 0.15 3.2E-06 52.1 4.7 44 463-508 8-55 (253)
219 PLN00141 Tic62-NAD(P)-related 92.6 0.16 3.6E-06 51.5 4.9 39 463-503 17-57 (251)
220 PF01118 Semialdhyde_dh: Semia 92.6 0.19 4.2E-06 46.0 4.9 98 465-567 1-109 (121)
221 PF02737 3HCDH_N: 3-hydroxyacy 92.6 0.21 4.6E-06 49.2 5.6 39 465-506 1-41 (180)
222 PRK12745 3-ketoacyl-(acyl-carr 92.6 0.25 5.5E-06 49.5 6.2 29 464-494 3-31 (256)
223 PRK09496 trkA potassium transp 92.5 0.43 9.4E-06 52.7 8.5 85 407-507 178-274 (453)
224 TIGR01746 Thioester-redct thio 92.5 0.15 3.3E-06 53.3 4.7 32 465-498 1-36 (367)
225 PRK06198 short chain dehydroge 92.5 0.26 5.7E-06 49.6 6.2 43 463-507 6-51 (260)
226 PRK08264 short chain dehydroge 92.5 0.16 3.5E-06 50.5 4.6 38 463-502 6-46 (238)
227 cd01076 NAD_bind_1_Glu_DH NAD( 92.4 0.69 1.5E-05 47.5 9.3 79 462-544 30-128 (227)
228 PRK08217 fabG 3-ketoacyl-(acyl 92.4 0.27 5.8E-06 48.9 6.2 43 463-507 5-49 (253)
229 PRK06603 enoyl-(acyl carrier p 92.4 0.24 5.2E-06 50.7 5.9 43 464-506 9-56 (260)
230 PRK05565 fabG 3-ketoacyl-(acyl 92.4 0.31 6.6E-06 48.4 6.5 43 463-507 5-50 (247)
231 PRK06484 short chain dehydroge 92.4 0.29 6.3E-06 55.0 7.0 46 462-509 4-51 (520)
232 PRK14185 bifunctional 5,10-met 92.3 0.73 1.6E-05 49.3 9.5 140 392-557 42-236 (293)
233 PRK07370 enoyl-(acyl carrier p 92.3 0.24 5.2E-06 50.6 5.8 32 463-494 6-37 (258)
234 PRK07792 fabG 3-ketoacyl-(acyl 92.3 0.3 6.4E-06 51.5 6.6 44 462-507 11-57 (306)
235 PRK06505 enoyl-(acyl carrier p 92.3 0.22 4.8E-06 51.5 5.5 35 463-497 7-43 (271)
236 PLN02214 cinnamoyl-CoA reducta 92.3 0.32 6.9E-06 52.1 6.9 35 463-499 10-46 (342)
237 PRK08936 glucose-1-dehydrogena 92.2 0.3 6.4E-06 49.6 6.3 44 462-507 6-52 (261)
238 COG1748 LYS9 Saccharopine dehy 92.2 0.23 4.9E-06 55.0 5.8 88 464-554 2-100 (389)
239 KOG0725 Reductases with broad 92.2 0.3 6.4E-06 51.4 6.4 44 462-507 7-52 (270)
240 PLN02989 cinnamyl-alcohol dehy 92.2 0.26 5.6E-06 51.8 6.0 39 463-503 5-45 (325)
241 PRK06113 7-alpha-hydroxysteroi 92.2 0.24 5.1E-06 50.1 5.5 44 462-507 10-55 (255)
242 PRK06997 enoyl-(acyl carrier p 92.2 0.21 4.6E-06 51.2 5.2 46 463-508 6-56 (260)
243 PRK07819 3-hydroxybutyryl-CoA 92.2 0.15 3.3E-06 53.8 4.2 88 464-554 6-122 (286)
244 PLN02730 enoyl-[acyl-carrier-p 92.2 0.21 4.6E-06 53.3 5.3 47 462-508 8-55 (303)
245 PRK07889 enoyl-(acyl carrier p 92.1 0.32 6.9E-06 49.7 6.4 45 463-509 7-57 (256)
246 PRK07023 short chain dehydroge 92.1 0.29 6.4E-06 48.9 6.1 33 464-498 2-36 (243)
247 PRK06841 short chain dehydroge 92.1 0.25 5.4E-06 49.7 5.5 36 462-499 14-51 (255)
248 TIGR02685 pter_reduc_Leis pter 92.1 0.24 5.2E-06 50.6 5.4 43 464-508 2-47 (267)
249 PRK07201 short chain dehydroge 92.0 0.27 5.8E-06 56.9 6.4 43 463-507 371-415 (657)
250 TIGR01500 sepiapter_red sepiap 92.0 0.2 4.4E-06 50.8 4.8 43 465-509 2-50 (256)
251 PRK08594 enoyl-(acyl carrier p 91.9 0.25 5.3E-06 50.6 5.3 46 463-508 7-57 (257)
252 PRK09260 3-hydroxybutyryl-CoA 91.9 0.26 5.7E-06 51.7 5.6 92 464-558 2-123 (288)
253 PRK07069 short chain dehydroge 91.8 0.2 4.3E-06 50.1 4.4 41 466-508 2-45 (251)
254 PRK06114 short chain dehydroge 91.8 0.4 8.7E-06 48.5 6.7 44 462-507 7-53 (254)
255 PRK15461 NADH-dependent gamma- 91.8 0.19 4.1E-06 53.2 4.4 102 465-576 3-126 (296)
256 KOG1502 Flavonol reductase/cin 91.8 0.21 4.5E-06 54.1 4.7 39 462-502 5-45 (327)
257 PRK06179 short chain dehydroge 91.8 0.2 4.3E-06 51.0 4.4 36 464-501 5-42 (270)
258 PRK14189 bifunctional 5,10-met 91.7 0.34 7.4E-06 51.6 6.2 146 394-565 45-244 (285)
259 PRK08219 short chain dehydroge 91.7 0.24 5.2E-06 48.6 4.8 41 464-507 4-46 (227)
260 cd01075 NAD_bind_Leu_Phe_Val_D 91.7 0.9 2E-05 45.6 8.9 147 462-634 27-186 (200)
261 PRK12823 benD 1,6-dihydroxycyc 91.7 0.35 7.7E-06 48.8 6.1 42 463-507 8-51 (260)
262 PRK06463 fabG 3-ketoacyl-(acyl 91.6 0.27 6E-06 49.6 5.2 42 463-506 7-51 (255)
263 PLN03139 formate dehydrogenase 91.6 0.11 2.3E-06 57.6 2.3 99 461-569 197-322 (386)
264 PRK05855 short chain dehydroge 91.5 0.37 8.1E-06 54.1 6.7 44 463-508 315-360 (582)
265 TIGR01831 fabG_rel 3-oxoacyl-( 91.5 0.32 6.9E-06 48.4 5.5 40 466-507 1-43 (239)
266 PF03807 F420_oxidored: NADP o 91.4 0.41 8.9E-06 41.4 5.4 58 465-531 1-67 (96)
267 PF10727 Rossmann-like: Rossma 91.3 0.23 4.9E-06 46.7 4.0 66 463-537 10-83 (127)
268 PRK12938 acetyacetyl-CoA reduc 91.3 0.46 9.9E-06 47.5 6.4 30 463-494 3-32 (246)
269 PRK12747 short chain dehydroge 91.3 0.27 5.9E-06 49.4 4.9 43 463-507 4-49 (252)
270 PRK15181 Vi polysaccharide bio 91.3 0.39 8.4E-06 51.5 6.3 31 462-494 14-44 (348)
271 PRK07791 short chain dehydroge 91.3 0.42 9.1E-06 49.8 6.3 44 463-508 6-60 (286)
272 TIGR01829 AcAcCoA_reduct aceto 91.2 0.41 9E-06 47.4 6.0 41 464-506 1-44 (242)
273 PRK12744 short chain dehydroge 91.2 0.25 5.4E-06 50.0 4.5 30 463-494 8-37 (257)
274 PF01262 AlaDh_PNT_C: Alanine 91.1 0.36 7.9E-06 46.8 5.3 92 463-558 20-143 (168)
275 PRK06701 short chain dehydroge 91.1 0.42 9E-06 50.0 6.1 43 463-507 46-91 (290)
276 PRK08226 short chain dehydroge 91.1 0.46 9.9E-06 48.1 6.2 34 463-498 6-41 (263)
277 PRK14193 bifunctional 5,10-met 91.1 0.47 1E-05 50.5 6.4 161 393-579 44-264 (284)
278 PRK07041 short chain dehydroge 91.1 0.28 6E-06 48.5 4.5 40 467-508 1-42 (230)
279 cd08270 MDR4 Medium chain dehy 91.0 1.6 3.5E-05 44.8 10.2 88 462-554 132-223 (305)
280 PLN02520 bifunctional 3-dehydr 90.9 0.65 1.4E-05 53.4 7.9 44 462-508 378-423 (529)
281 PRK12935 acetoacetyl-CoA reduc 90.9 0.32 6.9E-06 48.7 4.8 43 463-507 6-51 (247)
282 PLN02657 3,8-divinyl protochlo 90.8 0.37 7.9E-06 53.0 5.6 41 458-500 55-97 (390)
283 TIGR01505 tartro_sem_red 2-hyd 90.8 0.31 6.7E-06 51.1 4.8 83 466-558 2-98 (291)
284 PRK14187 bifunctional 5,10-met 90.7 0.4 8.7E-06 51.2 5.5 138 394-557 45-235 (294)
285 TIGR03649 ergot_EASG ergot alk 90.7 0.21 4.5E-06 51.5 3.3 34 465-500 1-36 (285)
286 PRK06720 hypothetical protein; 90.7 0.4 8.7E-06 46.8 5.1 44 462-507 15-60 (169)
287 PRK08268 3-hydroxy-acyl-CoA de 90.6 0.5 1.1E-05 54.1 6.6 94 462-558 6-128 (507)
288 PRK06483 dihydromonapterin red 90.6 0.4 8.7E-06 47.7 5.2 35 463-499 2-38 (236)
289 TIGR00658 orni_carb_tr ornithi 90.6 2.5 5.3E-05 45.4 11.4 158 406-572 61-267 (304)
290 PRK14170 bifunctional 5,10-met 90.5 0.48 1E-05 50.4 5.9 148 392-565 42-243 (284)
291 PRK08159 enoyl-(acyl carrier p 90.4 0.45 9.7E-06 49.3 5.5 46 463-508 10-60 (272)
292 PRK12859 3-ketoacyl-(acyl-carr 90.4 0.59 1.3E-05 47.5 6.3 32 463-494 6-37 (256)
293 PRK07984 enoyl-(acyl carrier p 90.4 0.43 9.4E-06 49.2 5.4 43 464-506 7-54 (262)
294 COG2085 Predicted dinucleotide 90.4 0.91 2E-05 46.4 7.5 147 467-635 4-176 (211)
295 PRK14184 bifunctional 5,10-met 90.4 0.54 1.2E-05 50.1 6.1 146 394-565 44-246 (286)
296 PRK09310 aroDE bifunctional 3- 90.3 0.57 1.2E-05 53.2 6.7 61 445-508 314-376 (477)
297 PRK06079 enoyl-(acyl carrier p 90.3 0.42 9.1E-06 48.6 5.1 43 463-506 7-51 (252)
298 PRK12748 3-ketoacyl-(acyl-carr 90.3 0.55 1.2E-05 47.5 5.9 32 463-494 5-36 (256)
299 PRK14191 bifunctional 5,10-met 90.2 0.97 2.1E-05 48.2 7.8 149 393-565 43-243 (285)
300 PRK07577 short chain dehydroge 90.2 0.32 6.9E-06 48.1 4.0 33 464-498 4-38 (234)
301 PRK07856 short chain dehydroge 90.1 0.34 7.4E-06 48.8 4.3 35 463-499 6-42 (252)
302 PRK08993 2-deoxy-D-gluconate 3 90.1 0.39 8.5E-06 48.6 4.7 32 461-494 8-39 (253)
303 PRK08415 enoyl-(acyl carrier p 90.1 0.48 1E-05 49.2 5.4 46 463-508 5-55 (274)
304 COG1090 Predicted nucleoside-d 90.0 0.36 7.8E-06 51.2 4.4 64 466-538 1-71 (297)
305 PRK14182 bifunctional 5,10-met 90.0 0.46 9.9E-06 50.5 5.2 160 394-579 43-262 (282)
306 PRK14180 bifunctional 5,10-met 90.0 0.51 1.1E-05 50.2 5.5 150 393-566 43-244 (282)
307 PRK07530 3-hydroxybutyryl-CoA 89.9 0.69 1.5E-05 48.6 6.5 39 464-505 5-45 (292)
308 PRK06940 short chain dehydroge 89.9 0.62 1.4E-05 48.1 6.1 41 464-508 3-45 (275)
309 PF03435 Saccharop_dh: Sacchar 89.9 0.48 1E-05 51.6 5.5 85 466-553 1-98 (386)
310 PRK14169 bifunctional 5,10-met 89.8 0.46 1E-05 50.5 5.1 147 393-565 42-242 (282)
311 PRK14166 bifunctional 5,10-met 89.7 0.54 1.2E-05 50.0 5.5 161 393-579 42-262 (282)
312 PRK07533 enoyl-(acyl carrier p 89.7 0.58 1.3E-05 47.8 5.6 46 462-507 9-59 (258)
313 PRK14176 bifunctional 5,10-met 89.6 0.76 1.6E-05 49.0 6.5 139 395-557 52-239 (287)
314 PRK08655 prephenate dehydrogen 89.6 0.82 1.8E-05 51.3 7.1 83 465-555 2-94 (437)
315 PRK14173 bifunctional 5,10-met 89.6 0.48 1E-05 50.5 5.0 139 393-557 41-230 (287)
316 PLN02545 3-hydroxybutyryl-CoA 89.6 0.6 1.3E-05 49.1 5.8 92 464-558 5-125 (295)
317 PRK15057 UDP-glucose 6-dehydro 89.5 1.2 2.7E-05 49.2 8.3 125 465-597 2-163 (388)
318 TIGR01830 3oxo_ACP_reduc 3-oxo 89.4 0.6 1.3E-05 46.0 5.3 40 466-507 1-43 (239)
319 COG3268 Uncharacterized conser 89.4 0.39 8.5E-06 52.0 4.2 67 462-530 5-76 (382)
320 TIGR02622 CDP_4_6_dhtase CDP-g 89.3 0.63 1.4E-05 49.7 5.7 36 464-501 5-42 (349)
321 COG0499 SAM1 S-adenosylhomocys 89.2 1.1 2.3E-05 49.3 7.3 170 442-622 187-388 (420)
322 cd00401 AdoHcyase S-adenosyl-L 89.2 1.2 2.7E-05 49.8 8.1 101 442-554 180-290 (413)
323 PRK06523 short chain dehydroge 89.2 0.43 9.3E-06 48.2 4.2 35 462-498 8-44 (260)
324 PRK14618 NAD(P)H-dependent gly 89.2 1 2.2E-05 48.1 7.2 92 464-558 5-110 (328)
325 PRK07424 bifunctional sterol d 89.1 0.55 1.2E-05 52.3 5.3 38 463-502 178-217 (406)
326 PLN02778 3,5-epimerase/4-reduc 89.0 0.57 1.2E-05 49.4 5.1 36 457-494 2-38 (298)
327 PRK12824 acetoacetyl-CoA reduc 89.0 1 2.2E-05 44.6 6.7 29 464-494 3-31 (245)
328 PF02882 THF_DHG_CYH_C: Tetrah 88.9 1.2 2.5E-05 43.7 6.8 79 451-553 19-108 (160)
329 PRK01713 ornithine carbamoyltr 88.9 2.1 4.5E-05 46.6 9.4 164 406-571 68-277 (334)
330 PRK14171 bifunctional 5,10-met 88.7 0.64 1.4E-05 49.6 5.2 146 394-565 45-245 (288)
331 PRK06398 aldose dehydrogenase; 88.7 0.46 1E-05 48.4 4.1 34 463-498 6-41 (258)
332 PRK08324 short chain dehydroge 88.7 0.8 1.7E-05 54.0 6.6 45 463-509 422-468 (681)
333 PRK07417 arogenate dehydrogena 88.6 0.95 2E-05 47.4 6.4 85 465-558 2-96 (279)
334 PLN02653 GDP-mannose 4,6-dehyd 88.5 0.81 1.8E-05 48.5 5.9 30 463-494 6-35 (340)
335 PRK06077 fabG 3-ketoacyl-(acyl 88.5 0.58 1.3E-05 46.7 4.6 30 463-494 6-35 (252)
336 PRK10792 bifunctional 5,10-met 88.5 1.2 2.5E-05 47.6 6.9 139 393-557 45-234 (285)
337 PLN00015 protochlorophyllide r 88.4 0.79 1.7E-05 48.3 5.6 40 467-508 1-43 (308)
338 PRK14186 bifunctional 5,10-met 88.2 0.8 1.7E-05 49.1 5.6 139 393-557 44-233 (297)
339 PRK11559 garR tartronate semia 88.2 0.75 1.6E-05 48.2 5.3 85 464-558 3-101 (296)
340 TIGR03466 HpnA hopanoid-associ 88.2 0.37 8E-06 50.0 3.0 34 465-500 2-37 (328)
341 PRK14172 bifunctional 5,10-met 88.0 0.76 1.6E-05 48.8 5.1 146 395-566 46-244 (278)
342 KOG0409 Predicted dehydrogenas 87.9 0.75 1.6E-05 49.3 5.0 121 440-572 15-157 (327)
343 smart00859 Semialdhyde_dh Semi 87.9 1.5 3.3E-05 39.8 6.4 86 465-553 1-99 (122)
344 PRK06171 sorbitol-6-phosphate 87.8 0.54 1.2E-05 47.7 3.9 35 463-499 9-45 (266)
345 PRK10217 dTDP-glucose 4,6-dehy 87.7 0.58 1.3E-05 49.8 4.2 29 464-494 2-30 (355)
346 COG0111 SerA Phosphoglycerate 87.6 1 2.2E-05 48.8 6.0 83 463-554 142-234 (324)
347 PLN03154 putative allyl alcoho 87.5 2.1 4.6E-05 46.0 8.3 101 448-553 142-258 (348)
348 PRK00779 ornithine carbamoyltr 87.5 3.4 7.3E-05 44.4 9.8 162 405-572 64-268 (304)
349 PRK07066 3-hydroxybutyryl-CoA 87.3 1.2 2.6E-05 48.2 6.3 87 462-551 6-117 (321)
350 PLN02695 GDP-D-mannose-3',5'-e 87.3 0.67 1.5E-05 50.4 4.4 31 462-494 20-50 (370)
351 PF00056 Ldh_1_N: lactate/mala 87.3 1.6 3.5E-05 41.3 6.5 65 465-531 2-75 (141)
352 TIGR02632 RhaD_aldol-ADH rhamn 87.3 0.89 1.9E-05 53.8 5.7 45 462-508 413-459 (676)
353 PRK08309 short chain dehydroge 87.2 0.83 1.8E-05 45.1 4.6 41 465-508 2-44 (177)
354 PLN02516 methylenetetrahydrofo 87.2 1 2.2E-05 48.3 5.6 138 394-557 52-242 (299)
355 PRK07574 formate dehydrogenase 87.1 0.98 2.1E-05 50.1 5.6 99 462-569 191-315 (385)
356 PRK14181 bifunctional 5,10-met 87.1 1.6 3.4E-05 46.7 6.8 138 394-557 39-232 (287)
357 cd05293 LDH_1 A subgroup of L- 87.0 0.51 1.1E-05 50.7 3.3 66 463-531 3-77 (312)
358 PRK14168 bifunctional 5,10-met 87.0 0.99 2.1E-05 48.4 5.4 139 393-557 45-240 (297)
359 PRK14177 bifunctional 5,10-met 87.0 0.86 1.9E-05 48.6 4.8 138 394-557 46-234 (284)
360 PRK14183 bifunctional 5,10-met 87.0 0.99 2.2E-05 48.0 5.3 163 393-579 43-262 (281)
361 PLN02928 oxidoreductase family 86.8 1.4 3.1E-05 48.0 6.6 94 462-558 158-270 (347)
362 PRK12562 ornithine carbamoyltr 86.8 2.9 6.2E-05 45.6 8.8 165 406-572 67-278 (334)
363 cd05191 NAD_bind_amino_acid_DH 86.7 1.7 3.7E-05 37.4 5.8 30 462-494 22-52 (86)
364 PRK10675 UDP-galactose-4-epime 86.6 0.91 2E-05 47.8 4.9 28 465-494 2-29 (338)
365 TIGR01915 npdG NADPH-dependent 86.4 1.2 2.5E-05 45.1 5.3 40 465-506 2-43 (219)
366 PLN02897 tetrahydrofolate dehy 86.2 1.1 2.4E-05 49.0 5.3 82 450-557 196-289 (345)
367 PRK08293 3-hydroxybutyryl-CoA 86.2 1.1 2.3E-05 47.1 5.1 40 464-506 4-45 (287)
368 PLN02240 UDP-glucose 4-epimera 86.2 1.1 2.4E-05 47.4 5.3 29 464-494 6-34 (352)
369 PRK14188 bifunctional 5,10-met 86.0 1.9 4.1E-05 46.3 6.9 100 393-494 44-187 (296)
370 TIGR01181 dTDP_gluc_dehyt dTDP 86.0 1.3 2.7E-05 45.6 5.4 28 465-494 1-30 (317)
371 PRK02102 ornithine carbamoyltr 85.8 8.7 0.00019 41.9 11.9 163 406-571 68-275 (331)
372 COG2084 MmsB 3-hydroxyisobutyr 85.7 0.66 1.4E-05 49.5 3.3 102 465-576 2-126 (286)
373 TIGR03026 NDP-sugDHase nucleot 85.7 2.7 5.9E-05 46.5 8.2 110 465-577 2-160 (411)
374 PF13561 adh_short_C2: Enoyl-( 85.6 0.99 2.1E-05 45.3 4.4 40 470-509 1-46 (241)
375 PRK09496 trkA potassium transp 85.6 2 4.4E-05 47.4 7.2 39 465-506 2-42 (453)
376 COG3967 DltE Short-chain dehyd 85.5 1.4 2.9E-05 45.3 5.2 44 464-509 6-51 (245)
377 PRK08261 fabG 3-ketoacyl-(acyl 85.5 1.4 3.1E-05 48.8 5.9 45 462-508 209-257 (450)
378 TIGR02279 PaaC-3OHAcCoADH 3-hy 85.4 1.3 2.8E-05 50.7 5.7 92 464-558 6-126 (503)
379 PRK14174 bifunctional 5,10-met 85.3 2.3 5E-05 45.6 7.1 140 393-557 43-238 (295)
380 cd08292 ETR_like_2 2-enoyl thi 85.3 2.7 5.9E-05 43.5 7.6 86 462-553 139-238 (324)
381 PRK12367 short chain dehydroge 85.2 1.1 2.5E-05 45.8 4.6 33 463-497 14-48 (245)
382 TIGR00872 gnd_rel 6-phosphoglu 85.2 1.4 3.1E-05 46.6 5.5 102 465-573 2-121 (298)
383 PLN00112 malate dehydrogenase 85.1 1.1 2.5E-05 50.4 4.9 66 463-531 100-182 (444)
384 COG1028 FabG Dehydrogenases wi 85.0 1.5 3.2E-05 44.0 5.3 45 462-508 4-52 (251)
385 PRK06550 fabG 3-ketoacyl-(acyl 85.0 1.1 2.3E-05 44.4 4.2 30 463-494 5-34 (235)
386 PLN02527 aspartate carbamoyltr 84.9 7.3 0.00016 41.9 10.7 159 406-570 61-267 (306)
387 cd05311 NAD_bind_2_malic_enz N 84.8 1.7 3.7E-05 44.5 5.7 110 462-581 24-161 (226)
388 COG0569 TrkA K+ transport syst 84.8 2.3 4.9E-05 43.5 6.6 36 464-502 1-38 (225)
389 PRK02255 putrescine carbamoylt 84.7 9.3 0.0002 41.7 11.5 162 406-572 64-275 (338)
390 PRK08125 bifunctional UDP-gluc 84.6 2.9 6.2E-05 49.2 8.2 31 462-494 314-345 (660)
391 PRK08220 2,3-dihydroxybenzoate 84.6 1.2 2.6E-05 44.6 4.4 31 462-494 7-37 (252)
392 PLN02858 fructose-bisphosphate 84.5 1.4 3.1E-05 56.1 5.9 176 386-577 234-452 (1378)
393 TIGR01777 yfcH conserved hypot 84.4 0.77 1.7E-05 46.8 3.0 33 466-500 1-35 (292)
394 cd01079 NAD_bind_m-THF_DH NAD 84.4 2.3 4.9E-05 43.1 6.1 86 460-553 59-156 (197)
395 PRK12490 6-phosphogluconate de 84.3 2.6 5.7E-05 44.6 7.0 103 465-577 2-126 (299)
396 PF01370 Epimerase: NAD depend 84.0 1.6 3.5E-05 42.9 4.9 27 466-494 1-27 (236)
397 PRK14619 NAD(P)H-dependent gly 83.9 7.2 0.00016 41.4 10.1 28 464-494 5-32 (308)
398 PRK14167 bifunctional 5,10-met 83.8 1.5 3.3E-05 47.0 4.9 138 394-557 44-236 (297)
399 cd05291 HicDH_like L-2-hydroxy 83.7 1.7 3.6E-05 46.4 5.2 64 465-531 2-74 (306)
400 PRK10669 putative cation:proto 83.6 2.3 5.1E-05 48.9 6.8 41 463-506 417-459 (558)
401 cd08294 leukotriene_B4_DH_like 83.6 4 8.6E-05 42.5 7.9 99 449-553 128-241 (329)
402 COG0686 Ald Alanine dehydrogen 83.5 1.6 3.5E-05 47.2 4.9 121 423-571 150-293 (371)
403 PRK13243 glyoxylate reductase; 83.4 2.1 4.5E-05 46.4 5.9 97 462-570 149-272 (333)
404 PF02254 TrkA_N: TrkA-N domain 83.4 2 4.4E-05 38.2 4.9 39 466-507 1-41 (116)
405 cd08253 zeta_crystallin Zeta-c 83.4 4.3 9.2E-05 41.3 7.9 41 463-505 145-187 (325)
406 cd05282 ETR_like 2-enoyl thioe 83.1 4.2 9.1E-05 42.0 7.8 86 462-553 138-237 (323)
407 PRK06130 3-hydroxybutyryl-CoA 83.0 1.8 4E-05 45.7 5.2 40 464-506 5-46 (311)
408 TIGR01759 MalateDH-SF1 malate 82.8 1.4 3.1E-05 47.6 4.3 25 464-490 4-28 (323)
409 cd08289 MDR_yhfp_like Yhfp put 82.8 2.8 6E-05 43.6 6.4 101 450-553 129-243 (326)
410 cd05276 p53_inducible_oxidored 82.6 3.8 8.3E-05 41.5 7.2 42 462-505 139-182 (323)
411 PRK12480 D-lactate dehydrogena 82.5 3.5 7.6E-05 44.7 7.2 94 462-569 145-265 (330)
412 cd00704 MDH Malate dehydrogena 82.3 1.5 3.2E-05 47.5 4.2 24 465-490 2-25 (323)
413 TIGR01327 PGDH D-3-phosphoglyc 82.3 2.6 5.7E-05 48.4 6.5 100 462-570 137-261 (525)
414 PRK11199 tyrA bifunctional cho 82.2 1.4 3.1E-05 48.3 4.1 39 457-497 92-130 (374)
415 PRK12491 pyrroline-5-carboxyla 82.1 4.1 8.9E-05 42.8 7.4 148 464-634 3-197 (272)
416 PLN00016 RNA-binding protein; 82.1 1.3 2.9E-05 48.0 3.8 38 460-499 49-92 (378)
417 COG0604 Qor NADPH:quinone redu 82.0 2.8 6.1E-05 45.2 6.2 139 408-553 80-241 (326)
418 PRK15469 ghrA bifunctional gly 81.7 1.3 2.9E-05 47.6 3.5 97 463-569 136-257 (312)
419 PLN02996 fatty acyl-CoA reduct 81.6 1.5 3.2E-05 49.9 4.1 25 462-488 10-34 (491)
420 PF01073 3Beta_HSD: 3-beta hyd 81.6 1.6 3.5E-05 45.9 4.1 26 467-494 1-28 (280)
421 KOG2380 Prephenate dehydrogena 81.6 2.6 5.7E-05 46.1 5.6 139 432-576 18-173 (480)
422 TIGR02437 FadB fatty oxidation 81.6 2.3 5E-05 50.8 5.8 42 460-504 310-353 (714)
423 PRK11891 aspartate carbamoyltr 81.6 6.3 0.00014 44.4 8.9 166 399-571 144-357 (429)
424 PRK03562 glutathione-regulated 81.5 2.9 6.3E-05 49.1 6.6 45 459-506 396-442 (621)
425 KOG1371 UDP-glucose 4-epimeras 81.4 3 6.5E-05 45.3 6.0 30 463-494 2-31 (343)
426 PTZ00354 alcohol dehydrogenase 81.3 5.3 0.00011 41.4 7.8 89 462-553 140-240 (334)
427 cd08243 quinone_oxidoreductase 81.2 5.5 0.00012 40.8 7.8 100 450-553 128-238 (320)
428 cd05288 PGDH Prostaglandin deh 81.1 5.9 0.00013 41.2 8.1 88 463-555 146-246 (329)
429 cd05280 MDR_yhdh_yhfp Yhdh and 80.8 6.6 0.00014 40.5 8.3 43 463-508 147-191 (325)
430 smart00822 PKS_KR This enzymat 80.6 1.8 3.9E-05 39.7 3.6 33 464-498 1-36 (180)
431 cd08259 Zn_ADH5 Alcohol dehydr 80.3 6.9 0.00015 40.5 8.3 42 462-505 162-205 (332)
432 PRK05442 malate dehydrogenase; 80.3 1.6 3.5E-05 47.2 3.6 26 463-490 4-29 (326)
433 PLN02383 aspartate semialdehyd 80.2 2.7 5.9E-05 45.9 5.3 129 462-609 6-152 (344)
434 PRK11064 wecC UDP-N-acetyl-D-m 80.1 7.9 0.00017 43.2 9.1 90 464-558 4-124 (415)
435 PRK04284 ornithine carbamoyltr 80.0 18 0.0004 39.4 11.6 168 399-572 63-277 (332)
436 cd08295 double_bond_reductase_ 79.9 4.4 9.6E-05 42.8 6.8 99 450-553 137-251 (338)
437 PRK07502 cyclohexadienyl dehyd 79.9 5.5 0.00012 42.2 7.5 85 464-556 7-103 (307)
438 PRK15438 erythronate-4-phospha 79.8 5.5 0.00012 44.1 7.7 84 462-558 115-215 (378)
439 cd05292 LDH_2 A subgroup of L- 79.8 3.7 7.9E-05 43.9 6.1 63 465-531 2-73 (308)
440 PF03721 UDPG_MGDP_dh_N: UDP-g 79.7 1.9 4E-05 42.9 3.6 129 465-600 2-177 (185)
441 cd08241 QOR1 Quinone oxidoredu 79.6 6.3 0.00014 40.0 7.6 42 462-505 139-182 (323)
442 KOG1200 Mitochondrial/plastidi 79.5 3.2 6.9E-05 42.4 5.1 45 463-509 14-60 (256)
443 PRK09424 pntA NAD(P) transhydr 79.5 6.5 0.00014 45.3 8.3 90 462-556 164-287 (509)
444 cd01338 MDH_choloroplast_like 79.2 1.7 3.6E-05 47.0 3.3 25 464-490 3-27 (322)
445 KOG4169 15-hydroxyprostaglandi 79.2 3.6 7.8E-05 42.9 5.5 75 463-539 5-97 (261)
446 cd05211 NAD_bind_Glu_Leu_Phe_V 79.1 3.1 6.8E-05 42.5 5.1 30 462-494 22-51 (217)
447 PRK06300 enoyl-(acyl carrier p 79.0 3.2 6.9E-05 44.2 5.4 33 462-494 7-39 (299)
448 PRK11880 pyrroline-5-carboxyla 79.0 3.7 8E-05 42.3 5.7 40 465-507 4-48 (267)
449 COG0039 Mdh Malate/lactate deh 79.0 2.3 4.9E-05 46.0 4.2 25 464-491 1-25 (313)
450 PRK09599 6-phosphogluconate de 78.8 6.2 0.00013 41.8 7.4 102 465-576 2-125 (301)
451 PLN02256 arogenate dehydrogena 78.8 5.2 0.00011 42.9 6.9 58 434-494 4-64 (304)
452 TIGR01179 galE UDP-glucose-4-e 78.7 2 4.3E-05 44.3 3.6 28 465-494 1-28 (328)
453 PLN02206 UDP-glucuronate decar 78.6 2.3 4.9E-05 47.8 4.3 30 463-494 119-148 (442)
454 TIGR02441 fa_ox_alpha_mit fatt 78.5 2.8 6.1E-05 50.2 5.3 40 462-504 334-375 (737)
455 PRK11730 fadB multifunctional 78.5 3.4 7.3E-05 49.4 5.9 38 462-502 312-351 (715)
456 TIGR02823 oxido_YhdH putative 78.3 8.5 0.00018 40.0 8.2 89 459-553 142-241 (323)
457 KOG1203 Predicted dehydrogenas 78.1 2.8 6.1E-05 46.9 4.7 62 442-505 57-121 (411)
458 cd03514 CrtR_beta-carotene-hyd 78.0 19 0.00042 36.3 10.4 46 216-261 141-189 (207)
459 PRK08664 aspartate-semialdehyd 77.9 4.1 8.8E-05 44.3 5.8 29 464-494 4-33 (349)
460 PRK07201 short chain dehydroge 77.9 4.5 9.7E-05 46.9 6.5 28 465-494 2-31 (657)
461 PLN02306 hydroxypyruvate reduc 77.8 4.9 0.00011 44.6 6.5 105 462-569 164-303 (386)
462 PRK08223 hypothetical protein; 77.8 3.3 7.1E-05 44.3 4.9 42 462-506 26-70 (287)
463 PRK11908 NAD-dependent epimera 77.8 2.9 6.4E-05 44.5 4.7 36 464-501 2-40 (347)
464 TIGR01296 asd_B aspartate-semi 77.7 2 4.4E-05 46.7 3.4 128 465-610 1-141 (339)
465 PRK08192 aspartate carbamoyltr 77.7 7.6 0.00016 42.4 7.8 162 406-571 66-276 (338)
466 KOG1210 Predicted 3-ketosphing 77.6 3.1 6.6E-05 45.0 4.6 62 451-514 21-84 (331)
467 PLN02166 dTDP-glucose 4,6-dehy 77.6 2.7 5.8E-05 47.2 4.5 31 462-494 119-149 (436)
468 PRK00856 pyrB aspartate carbam 77.5 19 0.00041 38.8 10.7 156 399-573 63-266 (305)
469 PRK14106 murD UDP-N-acetylmura 77.3 5.4 0.00012 44.2 6.8 29 463-494 5-33 (450)
470 PLN02572 UDP-sulfoquinovose sy 77.3 2.4 5.1E-05 47.5 4.0 30 463-494 47-76 (442)
471 TIGR01724 hmd_rel H2-forming N 77.3 4.5 9.8E-05 44.1 5.8 74 478-558 32-121 (341)
472 PLN02602 lactate dehydrogenase 77.2 2.2 4.7E-05 46.7 3.5 64 464-531 38-111 (350)
473 cd08268 MDR2 Medium chain dehy 77.2 9.9 0.00021 38.8 8.2 86 463-554 145-244 (328)
474 TIGR01757 Malate-DH_plant mala 77.1 2.3 4.9E-05 47.3 3.6 65 464-531 45-126 (387)
475 PRK06436 glycerate dehydrogena 77.1 4.5 9.8E-05 43.4 5.8 80 462-554 121-210 (303)
476 PLN02350 phosphogluconate dehy 77.0 2.6 5.7E-05 48.2 4.2 110 462-576 5-138 (493)
477 cd05294 LDH-like_MDH_nadp A la 76.9 2.9 6.3E-05 44.8 4.3 28 465-494 2-31 (309)
478 cd08293 PTGR2 Prostaglandin re 76.8 6.7 0.00014 41.3 7.0 85 464-553 156-254 (345)
479 PRK06035 3-hydroxyacyl-CoA deh 76.7 3.3 7.1E-05 43.5 4.6 39 464-505 4-44 (291)
480 COG1484 DnaC DNA replication p 76.7 5.5 0.00012 41.6 6.2 76 453-534 96-176 (254)
481 TIGR01692 HIBADH 3-hydroxyisob 76.6 2.9 6.2E-05 43.9 4.1 92 476-575 6-120 (288)
482 PRK11150 rfaD ADP-L-glycero-D- 76.3 2.4 5.1E-05 44.2 3.4 27 466-494 2-28 (308)
483 PRK15409 bifunctional glyoxyla 76.2 5.1 0.00011 43.3 6.0 99 461-569 143-267 (323)
484 PRK09009 C factor cell-cell si 76.1 3 6.5E-05 41.4 3.9 28 465-494 2-31 (235)
485 COG1250 FadB 3-hydroxyacyl-CoA 76.0 1.6 3.5E-05 47.0 2.1 37 463-502 3-41 (307)
486 PLN02342 ornithine carbamoyltr 75.9 25 0.00054 38.7 11.1 162 406-572 107-310 (348)
487 cd00300 LDH_like L-lactate deh 75.9 2.1 4.6E-05 45.5 3.0 63 466-531 1-72 (300)
488 PRK13581 D-3-phosphoglycerate 75.8 5.4 0.00012 45.9 6.4 83 462-554 139-231 (526)
489 cd00650 LDH_MDH_like NAD-depen 75.7 3.2 6.9E-05 43.1 4.1 64 466-531 1-76 (263)
490 TIGR01214 rmlD dTDP-4-dehydror 75.7 2.8 6E-05 43.0 3.6 28 465-494 1-28 (287)
491 PLN02477 glutamate dehydrogena 75.6 11 0.00024 42.3 8.5 29 462-493 205-233 (410)
492 cd05195 enoyl_red enoyl reduct 75.5 9.3 0.0002 37.9 7.3 89 462-554 108-210 (293)
493 PRK14874 aspartate-semialdehyd 75.4 3.6 7.8E-05 44.5 4.5 128 464-609 2-142 (334)
494 PRK00257 erythronate-4-phospha 75.2 9 0.00019 42.5 7.7 80 462-554 115-208 (381)
495 PRK08605 D-lactate dehydrogena 75.0 6.3 0.00014 42.7 6.3 81 462-554 145-237 (332)
496 PRK00094 gpsA NAD(P)H-dependen 74.9 7 0.00015 41.1 6.5 91 465-558 3-111 (325)
497 PRK06932 glycerate dehydrogena 74.5 4.4 9.6E-05 43.6 4.9 94 462-569 146-264 (314)
498 PRK13771 putative alcohol dehy 74.4 13 0.00027 39.0 8.3 54 450-505 149-205 (334)
499 PRK06223 malate dehydrogenase; 74.4 6.5 0.00014 41.6 6.2 65 464-531 3-76 (307)
500 PRK06129 3-hydroxyacyl-CoA deh 74.2 4.7 0.0001 42.8 5.0 37 465-504 4-42 (308)
No 1
>PLN02869 fatty aldehyde decarbonylase
Probab=100.00 E-value=1.5e-189 Score=1546.66 Aligned_cols=606 Identities=70% Similarity=1.237 Sum_probs=581.4
Q ss_pred eeeeccccceEEehhhhhhhhhhhhcCccccCCccchhHHHHHHHHHHHHhHHHHHhhchhhHhcCCCCCCCCccccccc
Q 006607 12 IYLLNVCVQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDR 91 (639)
Q Consensus 12 ~~~~l~~~ky~l~~P~v~~~~~~~~~~~~~~~~~~~~~il~~~llr~l~~~~wi~l~~~~~~~~k~KIq~~~~~~~qvdr 91 (639)
.|--||++||++|+|+|+|++|+++.+++++.|+.++++++++++|++++|+|++++|++++++|+||++++++|+|+||
T Consensus 12 pW~~lG~~Ky~~~~p~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~l~~q~W~s~sr~~~~~~~~ri~~~~i~f~QvDr 91 (620)
T PLN02869 12 PWKPLGSFKYVVLAPWVIHSIYSFVVKDEKERDLSYFLIFPFLLWRMLHNQLWISLSRYRTAKGNNRIVDKGIEFEQVDR 91 (620)
T ss_pred cccccCCeeeeeehHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhceeeeccCCCceeecc
Confidence 46678999999999999999999998766667777999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHHHHHHHhhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhccccCccccCCCh
Q 006607 92 ERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEP 171 (639)
Q Consensus 92 E~~~~n~iil~~ll~~~~~~~~p~~~~~lP~w~~~gli~~lll~llv~Df~~Yw~HRllH~~~Ly~~~H~vHH~s~~p~~ 171 (639)
|++||||+|++.++++++++.+| +.+.+|.|++.|++..+++|+++.|++|||+||++|++++||++|++||++.+|+|
T Consensus 92 e~~wDd~iil~~l~~~~~~~~~p-~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~HkvHHss~~~~P 170 (620)
T PLN02869 92 ERNWDDQILFNGILFYVGYMILP-GASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEP 170 (620)
T ss_pred ccccchHHHHHHHHHHHHHHhhh-hhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCCCCCc
Confidence 99999999999999999998999 78999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHH
Q 006607 172 ITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSL 251 (639)
Q Consensus 172 ~ta~~~hplE~ll~~~l~~iPl~~~~l~g~~~~~~i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~l 251 (639)
+++..+++.|++.+.+++.+|+++..+++..|+.++++|+++.++.++++|||+|++|+++++.+|+++|+++||++|++
T Consensus 171 ~Ts~~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLkyll~TPsfHdl 250 (620)
T PLN02869 171 ITSVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKYLMYTPSYHSL 250 (620)
T ss_pred hhhhcCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcchheecCchHHhH
Confidence 99875444688877777889998877777778999999999999999999999999999999888999999999999999
Q ss_pred hhcCCCCCcCCCcchhhhhcCCCCCCCchHHHHHhhcCCccccccCCCCceeeecccCCccccccccchhhhhccCCccc
Q 006607 252 HHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRY 331 (639)
Q Consensus 252 HH~~~~~NYG~~f~lWDrLFGT~~~~~~~~~~~~~~~~~~~~~~~~~~pd~v~l~h~~~~~s~~h~~~~~~~~~~~p~~~ 331 (639)
||+++++|||.+|++||++|||+++++|+++|+... +.++ +||||||||+||++|+||+||||||+||+||+
T Consensus 251 HHs~fd~NYGlfF~~WDrLFGT~d~~s~~l~e~~~~--~~~~-----~pd~V~l~H~t~~~s~~h~~~~~~s~as~p~~- 322 (620)
T PLN02869 251 HHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLK--RPEE-----IPDVVHLTHLTTPDSIYHLRLGFASLASKPYI- 322 (620)
T ss_pred HhccCCcCcccchHHHHhccCCCCCCchhHHHHhhc--Cccc-----CCCEEEEeccCCHHHhhccchHHHHhccCCcc-
Confidence 999999999999999999999999999999999887 4344 99999999999999999999999999999999
Q ss_pred cccCcchhhcchhhHHHHHHHHHHHHhcceEEEeecccCcccceeEEeeccCcccccchhhHHHHHHHHHHHHHHHHcCC
Q 006607 332 TYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGV 411 (639)
Q Consensus 332 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~I~~Ai~~A~~~G~ 411 (639)
++||||||||+|+++|+++ |+|||+|++|+|+|||+++|||+||||||||++|+++|+||++||+||++|||+||
T Consensus 323 ----~~~~l~~~wp~~~~~m~~~-w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie~ail~ad~~Gv 397 (620)
T PLN02869 323 ----SKWYLRLMWPVTSWSMMLT-WIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGV 397 (620)
T ss_pred ----chhHHHHHHHHHHHHHHHH-HHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999 79999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE
Q 006607 412 KVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK 491 (639)
Q Consensus 412 kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~ 491 (639)
||+|||+|||+|+|||+|++||+|||+ ||||||||||||||||+|+||++++|||++|||+ |||||||.+|||||||
T Consensus 398 kv~sLg~LNk~~~LN~~G~l~v~k~p~-L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~s--K~~raia~~lc~r~i~ 474 (620)
T PLN02869 398 KVLSLGLLNQGEELNRYGELYIHRNPK-LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS--KVAYFIASALCQRGIQ 474 (620)
T ss_pred EEEechhcchhhhhcCCceEeeecCCC-cceEEEeCCchHHHHHHHhcCCCCceEEEecCcc--HHHHHHHHHHHhcCCe
Confidence 999999999999999999999999999 9999999999999999999999999999999996 9999999999999999
Q ss_pred EEecchhhHHHHHhhCCc-ccccceeeeccccccceeEEEEcCcCChhhhhcCCCCceeecccccCCcCCCCCceeecCC
Q 006607 492 VATICKDDYEKLKLRIPV-EAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTP 570 (639)
Q Consensus 492 v~~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~ 570 (639)
++..++|||++||+|+++ ++|+||+++|++ +||+|||||+++++||+||||||+||||||+|+++.||||+|+++|
T Consensus 475 ~~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~k~w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~~R~dC~Y~~~p 551 (620)
T PLN02869 475 VATFREDEYEKLNKKLPNTECGSKLLLSKNY---SEKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPKRLRKDCFYHTTP 551 (620)
T ss_pred EeecCHHHHHHHHHhccchhhhhhEEEeecc---CceeEEecCCCCHHHHhhCCCCCeecccccCCchhhhccccccCCc
Confidence 655899999999999988 899999999998 9999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccccccccccCcchhhhHHHHHHHHHhcCCCCCccchh-hhhHHHHHHHHHhcCCccCCCC
Q 006607 571 AMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQT-MCDIHQVWHASLRHGFRPLFPV 638 (639)
Q Consensus 571 a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~e~G~i-v~~i~~iw~aa~kHGF~p~~~~ 638 (639)
||++|+++||++|||||||||+|+||||||||||||||++|||| + |++||++|+||+||||+|+...
T Consensus 552 am~~p~~~~~~~sce~~l~r~v~~a~~~~givh~legw~~he~g-~~v~~id~~W~aal~hgf~p~~~~ 619 (620)
T PLN02869 552 AMMSPKSFENVDSCENWLPRRAMSAWRVAGILHALEGWNVHECG-YTMFDIEKIWEASLQHGFRPLLIP 619 (620)
T ss_pred cccCChhhcccchhhccccchhhhHhhhcceeeeecCccccccc-cccccHHHHHHHHHHcCCccCCCC
Confidence 99999999999999999999999999999999999999999999 8 9999999999999999998754
No 2
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=100.00 E-value=1.9e-67 Score=495.84 Aligned_cols=164 Identities=61% Similarity=1.106 Sum_probs=160.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccccceeEEEEcCcCChhhhhcCCC
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPK 545 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~a~~ 545 (639)
|||+|+++ |||||||.+|||||+||+|.++|+|++||++++++.++||++++++ ++|+|||||+||++||++|||
T Consensus 1 V~L~G~~s--KvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~~~~~~~~Lv~~~~~---~~K~WlVGd~l~~~EQ~~Ap~ 75 (164)
T PF12076_consen 1 VFLTGNTS--KVARAIALALCRRGVQVVMLSKERYESLKSEAPEECQSNLVQSTSY---QAKTWLVGDGLTEEEQKWAPK 75 (164)
T ss_pred Ceeccccc--HHHHHHHHHHHhcCCEEEEecHHHHHHHHHHcCHHhhccEEeecCC---CceeEEeCCCCCHHHHhcCCC
Confidence 79999995 9999999999999999999999999999999999999999999998 679999999999999999999
Q ss_pred CceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhhhHHHHHHHHHhcCCCCCccchhhhhHHHHHH
Q 006607 546 GTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWH 625 (639)
Q Consensus 546 G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~e~G~iv~~i~~iw~ 625 (639)
||+|||||||||+++||||+|+++|||++|++++|+||||||||||+||||||||||||||||++||||.-|++||++|+
T Consensus 76 Gt~FipfsqfP~~~~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG~~v~~idkvW~ 155 (164)
T PF12076_consen 76 GTHFIPFSQFPPKKVRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECGDDVDRIDKVWE 155 (164)
T ss_pred CCEEeeccCCCcHHHhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccCcccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999943999999999
Q ss_pred HHHhcCCcc
Q 006607 626 ASLRHGFRP 634 (639)
Q Consensus 626 aa~kHGF~p 634 (639)
||++|||+|
T Consensus 156 AAl~HGF~P 164 (164)
T PF12076_consen 156 AALKHGFRP 164 (164)
T ss_pred HHHHcCCCC
Confidence 999999998
No 3
>PRK14982 acyl-ACP reductase; Provisional
Probab=100.00 E-value=1.5e-36 Score=322.45 Aligned_cols=263 Identities=15% Similarity=0.189 Sum_probs=204.9
Q ss_pred HhcceEEEeecccCcc---cceeEEe--eccCcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCce
Q 006607 357 IYGRTFVSESNTLDKL---KLQTWVV--PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI 431 (639)
Q Consensus 357 ~~~~~f~~~~~~~~~~---~~~~w~~--pr~~~~y~~~~~~~~in~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~ 431 (639)
....+|++++-.++-- ..+-|.| |-.+=|- ...+.|.+.|+|++|+..|+|.|++|++||++++ +.+++.
T Consensus 35 ~~~~p~~~~~~~v~S~~g~~~eg~~i~~~~~pe~l-~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~ts---iv~~~~- 109 (340)
T PRK14982 35 CSAPPQLVDHIEVTSATGQTIEGKYIESCFLPEML-SNRRFKTARRKVLNAMALAQKKGINITALGGFSS---IIFENF- 109 (340)
T ss_pred hhCCCeEeeeEEEEeCCCCEEEEEEEeCCCCHHHH-hccChHHHHHHHHHHHHHHHHCCCeEEEcCChHH---HhcCCc-
Confidence 3346899999888544 4477886 3333233 4445666656799999999999999999999999 665552
Q ss_pred eeecCCC--Ccce---eeecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhc-cCc-EEEe-
Q 006607 432 YLERQPN--KLKI---KVVDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQ-MGI-KVAT- 494 (639)
Q Consensus 432 ~~~k~p~--~L~i---rvv~Gnsltaa~v~~~i~~---------~~~~V~~~Gatg~~kig~ava~~L~~-~~~-~v~~- 494 (639)
.+.++.+ .+++ +|||||||||++.+++++. ..++|+|+||+| +||+.+|+.|++ .|+ ++++
T Consensus 110 ~~~~~~~~r~i~ie~~~~TtGNs~T~~ll~~~V~la~~~lg~~l~~k~VLVtGAtG--~IGs~lar~L~~~~gv~~lilv 187 (340)
T PRK14982 110 NLLQHKQVRNTTLEWERFTTGNTHTAYVICRQVEQNAPRLGIDLSKATVAVVGATG--DIGSAVCRWLDAKTGVAELLLV 187 (340)
T ss_pred ccccccccccceeccccccCCchhHHHHHHHHHHHhHHHhccCcCCCEEEEEccCh--HHHHHHHHHHHhhCCCCEEEEE
Confidence 3332211 1455 8999999999999998865 368999999999 999999999985 454 6666
Q ss_pred -cchhhHHHHHhhCCcccccceeeeccccc--cceeE--EEEcC----cCChhhhhcCCCCceeecccccCCc----CCC
Q 006607 495 -ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKI--WLVGD----DLTGKEQARAPKGTIFIPYTQIPPR----KLR 561 (639)
Q Consensus 495 -~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~v--wivg~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R 561 (639)
|++++++.+++++..+. +.++.+ +++++ +..+. .+++++. ++|.++||.+ +|+. .-|
T Consensus 188 ~R~~~rl~~La~el~~~~------i~~l~~~l~~aDiVv~~ts~~~~~~I~~~~l---~~~~~viDiA-vPRDVd~~v~~ 257 (340)
T PRK14982 188 ARQQERLQELQAELGGGK------ILSLEEALPEADIVVWVASMPKGVEIDPETL---KKPCLMIDGG-YPKNLDTKVQG 257 (340)
T ss_pred cCCHHHHHHHHHHhcccc------HHhHHHHHccCCEEEECCcCCcCCcCCHHHh---CCCeEEEEec-CCCCCCcccCC
Confidence 88899999998865332 223332 44444 44443 4888777 7999999999 5554 335
Q ss_pred CCceeecCCccccCCCCc-cc-cccccccCcchhhhHHHHHHHHHhcCCCCC-ccch--h-hhhHHHHHHHHHhcCCccC
Q 006607 562 KDCFYHSTPAMIIPPSLS-NM-HSCENWLGRRVMSAWRIAGIIHALEGWDLN-ECGQ--T-MCDIHQVWHASLRHGFRPL 635 (639)
Q Consensus 562 ~dc~y~~~~a~~~P~~~~-~~-~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~-e~G~--i-v~~i~~iw~aa~kHGF~p~ 635 (639)
+|+.+.+++.+++|.+++ ++ ...|+++|+|+++||+||+||++||||++| ++|| | ++||++|.++|.||||+|+
T Consensus 258 ~~V~v~~gG~V~~p~~vd~~l~~~v~~~~~~r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~ 337 (340)
T PRK14982 258 PGIHVLKGGIVEHSLDIDWKIMEIAEMDNPQRQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPL 337 (340)
T ss_pred CCEEEEeCCccccCCCcCccHHHHHhccchhhHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCccc
Confidence 999999999999999987 43 346789999999999999999999999999 5997 8 9999999999999999996
Q ss_pred C
Q 006607 636 F 636 (639)
Q Consensus 636 ~ 636 (639)
-
T Consensus 338 ~ 338 (340)
T PRK14982 338 L 338 (340)
T ss_pred c
Confidence 4
No 4
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=100.00 E-value=6.4e-37 Score=309.48 Aligned_cols=234 Identities=20% Similarity=0.225 Sum_probs=191.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCce-eeecCCCCcc-eeeecCChhHHHHHHhcCcC----
Q 006607 388 LPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI-YLERQPNKLK-IKVVDGSSLAAAVVVNSLPK---- 461 (639)
Q Consensus 388 ~~~~~~~in~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~-~~~k~p~~L~-irvv~Gnsltaa~v~~~i~~---- 461 (639)
+-++.|++.|.+.+|++.|+|.|++|++||+|++ +.++-+. ...++|+ +. +|+|||||+||+++|.++.+
T Consensus 85 ~~s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e-~t~~~~ttgns~Tayaa~r~Vl~~~~~ 160 (351)
T COG5322 85 LRSRPKAATRRVLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVE-LTFTRFTTGNSHTAYAACRQVLKHFAQ 160 (351)
T ss_pred HhhCHHHHHHHHHHHHHHHHHcCCeEEeecchhh---hhccccccccccceE-EEEEecccCCccchHHHHHHHHHHHHH
Confidence 3456889999999999999999999999999999 6664443 4458999 88 99999999999999999977
Q ss_pred -----CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe------cchhhHHHHHhhCCcccccceeeeccccc--ccee
Q 006607 462 -----TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT------ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTK 527 (639)
Q Consensus 462 -----~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~------~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~ 527 (639)
..++|.+||||| +||++||+||+ +-++++++ ++++++..||+++..+. +-+++++. ++..
T Consensus 161 lGidlsqatvaivGa~G--~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~----i~s~d~~~~~e~i~ 234 (351)
T COG5322 161 LGIDLSQATVAIVGATG--DIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGK----IMSLDYALPQEDIL 234 (351)
T ss_pred hCcCHHHCeEEEecCCc--hHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCe----eeeccccccccceE
Confidence 488999999999 99999999999 77777777 66777888888877776 22334543 5557
Q ss_pred EEEE----cCcCChhhhhcCCCCceeecccc---cCCc-CCCCCceeecCCccccCCC--CccccccccccCcchhhhHH
Q 006607 528 IWLV----GDDLTGKEQARAPKGTIFIPYTQ---IPPR-KLRKDCFYHSTPAMIIPPS--LSNMHSCENWLGRRVMSAWR 597 (639)
Q Consensus 528 vwiv----g~~~~~~~q~~a~~G~~f~~~~~---~~~~-~~R~dc~y~~~~a~~~P~~--~~~~~~~e~~~pr~~~~Ac~ 597 (639)
+|++ |-.|.|+.+ +||...+|=.. +++. +-|.|+..++++.+.-|.+ |..+...+| |.|+++||.
T Consensus 235 v~vAs~~~g~~I~pq~l---kpg~~ivD~g~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~~~~~--p~~~l~aCl 309 (351)
T COG5322 235 VWVASMPKGVEIFPQHL---KPGCLIVDGGYPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMKIVGM--PVRQLFACL 309 (351)
T ss_pred EEEeecCCCceechhhc---cCCeEEEcCCcCcccccccccCCCeEEecCccccCccccchhHHHHccc--chhhHHHHH
Confidence 7994 556677666 78887777663 4444 4556778888888877776 666655554 999999999
Q ss_pred HHHHHHHhcCCCCC-ccch-h-hhhHHHHHHHHHhcCCccCC
Q 006607 598 IAGIIHALEGWDLN-ECGQ-T-MCDIHQVWHASLRHGFRPLF 636 (639)
Q Consensus 598 a~~~v~alEgw~~~-e~G~-i-v~~i~~iw~aa~kHGF~p~~ 636 (639)
||+||+++|||++| +||| | +|||++|.++|.||||+|+.
T Consensus 310 AEtlil~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~~ 351 (351)
T COG5322 310 AETLILEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPLD 351 (351)
T ss_pred HHHHHHHhcchhhhccccccccHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999 5999 8 99999999999999999974
No 5
>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]
Probab=100.00 E-value=9e-35 Score=296.87 Aligned_cols=216 Identities=19% Similarity=0.239 Sum_probs=178.7
Q ss_pred hHHHHHHHHHHHHhHHHHHhh--chhhHhcCCCCCCCCccccccccccch-----hhhHHHHHHHHHHHhhcC-C---CC
Q 006607 49 LIFPFLLLRMLHDQIWISLSR--YRTAKRNNRIVDKAIEFDQVDRERNWD-----DQIVFNGLIFYIVRMLIP-P---SY 117 (639)
Q Consensus 49 ~il~~~llr~l~~~~wi~l~~--~~~~~~k~KIq~~~~~~~qvdrE~~~~-----n~iil~~ll~~~~~~~~p-~---~~ 117 (639)
.++...++.++.+.+|+.++. .+++.||||||+++.+ ..++.++|. ||++++.++..+.+...+ . ..
T Consensus 34 ~~~~~~~~y~l~~lpf~~iD~t~~~~~~~rYKIQp~k~~--s~~~~~kc~k~vl~n~~~v~~p~~~~~y~~~~~~~~~~~ 111 (283)
T KOG0873|consen 34 PFIVHELVYWLFCLPFIFIDVTNRPPFLRRYKIQPKKNP--SLSKQLKCLKVVLLNHFLVVLPLTLVSYPFVEWFGLPSG 111 (283)
T ss_pred hHHHHHHHHHHhcchheEeecccCcchhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHhHHHHHHhCCCcC
Confidence 377788888888999998774 6789999999998654 244444443 777777777666654432 1 22
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 006607 118 SNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM 197 (639)
Q Consensus 118 ~~lP~w~~~gli~~lll~llv~Df~~Yw~HRllH~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~ 197 (639)
..||.|.+ ++.+++++++++|+.|||.||++|++++||.+||+||++.+|.+.++.|+||+|+++.++. |+.++.
T Consensus 112 ~plPt~~~--~l~~l~i~~liEd~~fY~~HRL~H~~~~Yk~iHKvHHe~taPf~~sa~YaHp~E~~~lg~~---~~~~p~ 186 (283)
T KOG0873|consen 112 APLPSWKE--MLAQLVVFFLIEDIGFYWSHRLFHHKWLYKYIHKVHHEYTAPFGLSAEYAHPLEHLFLGLG---TVMGPA 186 (283)
T ss_pred CCCCcHHH--HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhhhhcccCchhHhhhhcCHHHHHHcCCh---hhhhhH
Confidence 34667665 9999999999999999999999999999999999999999999999999999999998763 444444
Q ss_pred HhhhhhHHHHHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcCCCCCcCCCcchhhhhcCCCCCC
Q 006607 198 VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRS 277 (639)
Q Consensus 198 l~g~~~~~~i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~~~~NYG~~f~lWDrLFGT~~~~ 277 (639)
+++. |+.+.++|+++..+.++..||||++ |+++.+.+|+. ++.++||+||..+.+||+..|+.||||+||....
T Consensus 187 ~~~~-H~~t~wiw~~l~i~~t~~~HsGY~f-Pwsl~~~~pfy----~ga~~HD~HH~~f~~n~~~~f~~~D~i~GTd~~~ 260 (283)
T KOG0873|consen 187 LLCG-HVITLWIWIALRILETVESHSGYDF-PWSLSKLIPFY----GGAEHHDYHHLVFIGNFASVFGYLDRIHGTDSTY 260 (283)
T ss_pred Hhhh-HHHHHHHHHHHHHHHHhhccCCCCC-CccccccCccc----CCCcccchhhhhccccccchhHHHHHHhccCccH
Confidence 3443 9999999999999999999999997 99999888873 6899999999999999999999999999997543
No 6
>COG3000 ERG3 Sterol desaturase [Lipid metabolism]
Probab=99.94 E-value=3e-26 Score=237.53 Aligned_cols=152 Identities=27% Similarity=0.436 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 006607 127 GVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIAS 206 (639)
Q Consensus 127 gli~~lll~llv~Df~~Yw~HRllH~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~l~g~~~~~~ 206 (639)
.+++++++.+++.|+.+||.||+.|+.++||++|++||++.+|+++++.+.||+|.++......+|+.++ + .+..+
T Consensus 94 ~~~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l~---~-~~~~~ 169 (271)
T COG3000 94 PFALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLLL---G-LSPVA 169 (271)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCcccCCchhhhhcChHHHHHHHHHHHHHHHHh---c-CCHHH
Confidence 3678888888999999999999999999999999999999999999999999999999876655665542 3 57777
Q ss_pred HHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcCC--CCCcCCCcchhhhhcCCCCCCCchHHHH
Q 006607 207 FVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQF--RTNYSLFMPIYDYIYGTIDRSSDSVYEK 284 (639)
Q Consensus 207 i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~~--~~NYG~~f~lWDrLFGT~~~~~~~~~~~ 284 (639)
+..+.++..+.+.++|||++. | .. .+++++++.+|++|++||+++ ++|||.++++|||+|||+.++.++.+++
T Consensus 170 ~~~~~~~~~~~~~~~H~~~~~-~-~~---~~~~~~v~~~p~~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~ 244 (271)
T COG3000 170 VALLFIFLLFWAVLIHSNLDL-P-LP---LGWLRYVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDK 244 (271)
T ss_pred HHHHHHHHHHHHHHHhcCccc-c-CC---cccceeeecCchHHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCccc
Confidence 777888888999999999996 4 22 345566789999999999997 4999999999999999999999888888
Q ss_pred Hhh
Q 006607 285 SLK 287 (639)
Q Consensus 285 ~~~ 287 (639)
+..
T Consensus 245 ~~~ 247 (271)
T COG3000 245 IGV 247 (271)
T ss_pred ccc
Confidence 665
No 7
>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]
Probab=99.86 E-value=8.7e-22 Score=199.36 Aligned_cols=143 Identities=20% Similarity=0.370 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 006607 127 GVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIAS 206 (639)
Q Consensus 127 gli~~lll~llv~Df~~Yw~HRllH~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~l~g~~~~~~ 206 (639)
..++.++++++..||.+||.||.+|++.+||+.|+.||.+...+|+++.++||++.+++++ |-.+..+..+.|..+
T Consensus 127 ~~~~~i~~flfF~Df~iYw~HR~lH~~~vy~~LH~~HH~~~~~tpfAslafhpidg~lqai----p~~I~~Fi~Plh~~t 202 (312)
T KOG0872|consen 127 LLFVSIFLFLFFTDFGIYWAHRELHHRGVYKRLHKPHHIWNICTPFASLAFHPIDGFLQAI----PYHIYPFIFPLHKVT 202 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhcchhhhhhccCchhhhhcCcchhHhhhc----hhHheeeeecchHHH
Confidence 3677888889999999999999999999999999999999999999999999999988764 444433333446666
Q ss_pred HHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcCCCCCcCCCcchhhhhcCCCCCCCchHHH
Q 006607 207 FVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYE 283 (639)
Q Consensus 207 i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~~~~NYG~~f~lWDrLFGT~~~~~~~~~~ 283 (639)
.++...+..+++.+.|.|.-.. +.+.++||.+|..||..++.|||.++.+|||+|||++.+.++.++
T Consensus 203 ~L~l~~f~~iwt~~IHd~~~~~----------l~~~ingaahHtvHH~~f~~NYG~~tilwDrmfgSfr~p~~~~~d 269 (312)
T KOG0872|consen 203 YLSLFTFVNIWTISIHDGIYGS----------LNPPINGAAHHTVHHTYFDYNYGQYTILWDRMFGSFRAPDHEDFD 269 (312)
T ss_pred HHHHHHHHHhHheeeecccccc----------ccCccccccccceeeeeEecCCCcEEEeHHhccCcccCccccccc
Confidence 6655566678888999885431 233468999999999999999999999999999999988876555
No 8
>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]
Probab=99.84 E-value=4.5e-22 Score=195.86 Aligned_cols=147 Identities=20% Similarity=0.352 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-HhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHH-HHHHHHHHHHhhhhhHH
Q 006607 128 VILTILVHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL-FAIPLVTTMVLKNASIA 205 (639)
Q Consensus 128 li~~lll~llv~Df~~Yw~HRllH-~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l-~~iPl~~~~l~g~~~~~ 205 (639)
...+++..+++.|.|.|++||.|| .+.+|+.+|++||+-.+|.+..|.|.||+|.++...+ -++.++. .| .++-
T Consensus 122 ~A~q~f~aflviDtWQYF~HRymH~NK~LYk~iHs~HHrL~VPYayGALyNhP~EGllLDT~G~gla~l~---sg-lspr 197 (287)
T KOG0874|consen 122 LARQFFAAFLVIDTWQYFLHRYMHMNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGGLAFLL---SG-LSPR 197 (287)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhceeEecchhhhhhhcCcchhhhhhhhchHHHHHH---cC-CCcc
Confidence 456778888999999999999999 7899999999999999999999999999999987542 1122221 12 2333
Q ss_pred HHHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcC--CCCCcC-CCcchhhhhcCCCCCCCchHH
Q 006607 206 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYS-LFMPIYDYIYGTIDRSSDSVY 282 (639)
Q Consensus 206 ~i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~--~~~NYG-~~f~lWDrLFGT~~~~~~~~~ 282 (639)
+.+++..+.+.-++.+||||-+ |..+++.+ . -+.+.+||+||+. ..+||+ ++|++||+++||+.+.+.|..
T Consensus 198 ~aiifFtfaTiKTVDDHCGy~l-P~dpfqm~--F---~NNa~YHDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~E~~ 271 (287)
T KOG0874|consen 198 TAIIFFTFATIKTVDDHCGYWL-PGDPFQMF--F---PNNAAYHDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSLEKR 271 (287)
T ss_pred ceEEEEEeeeeeeecccccccc-CCCceeEe--c---cCCchhhhhhhhhhccccccCCcHHHHHHHHHhhcCCchhccc
Confidence 3333444556778899999987 88776652 1 2579999999998 579998 589999999999998875544
Q ss_pred HH
Q 006607 283 EK 284 (639)
Q Consensus 283 ~~ 284 (639)
.+
T Consensus 272 ~e 273 (287)
T KOG0874|consen 272 LE 273 (287)
T ss_pred cc
Confidence 43
No 9
>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.68 E-value=6.1e-17 Score=144.56 Aligned_cols=111 Identities=29% Similarity=0.480 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHhh-HhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 006607 134 VHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYII 212 (639)
Q Consensus 134 l~llv~Df~~Yw~HRllH-~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~l~g~~~~~~i~~y~~ 212 (639)
+.+++.|+++||+||++| .+++| ++|+.||+..+|+++++.+.+|+|.++..++ ++.++.+++..+..++.++.+
T Consensus 3 ~~~l~~d~~~Y~~HRl~H~~~~l~-~~H~~HH~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 78 (114)
T PF04116_consen 3 LGFLLWDFWEYWMHRLLHKIPFLW-RIHKVHHSPKNPTPLSAFRFHPLEALLLALL---PLLLPLLLLPFHALAFLLGIA 78 (114)
T ss_pred eeHHHHHHHHHHHHHHHhcCchHH-HHHHHHhCCcccCchHHHHcChHHHHHHHHH---HHHHHHHHHhHhHHHHHHHHH
Confidence 456788999999999999 66666 9999999999999999999999999987653 333333344567778888888
Q ss_pred HHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhc
Q 006607 213 YVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHT 254 (639)
Q Consensus 213 ~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~ 254 (639)
+..+.+.++|||+.. + ..+..+++..+|++|+.||+
T Consensus 79 ~~~~~~~~~H~~~~~-~-----~~~~~~~~~~~~~~H~~HH~ 114 (114)
T PF04116_consen 79 LFYLWYIFIHSGYHH-R-----FPPRLRYLFVTPRHHDLHHS 114 (114)
T ss_pred HHHHHHHHhhcCccC-C-----CCCcchhHhcCHHHHHhhCc
Confidence 888999999999921 1 12456677889999999995
No 10
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.31 E-value=8.1e-12 Score=122.82 Aligned_cols=166 Identities=14% Similarity=0.088 Sum_probs=117.4
Q ss_pred ecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccc
Q 006607 445 VDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH 513 (639)
Q Consensus 445 v~Gnsltaa~v~~~i~~---------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~ 513 (639)
++||++|||++++.+.+ ..++|+++|++| .+|+++++.|+++|.+|.+ |+.++.+++.+++......
T Consensus 1 ~~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG--~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~ 78 (194)
T cd01078 1 SNGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE 78 (194)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 68999999999988875 346999999999 9999999999999999988 8889999888776433222
Q ss_pred ceee--ecc---ccc--cceeEEE----EcCcCChhhhhcCC-CCceeecccccCCc-----CCCCCceeecCCccccCC
Q 006607 514 NLVL--STS---YAA--HKTKIWL----VGDDLTGKEQARAP-KGTIFIPYTQIPPR-----KLRKDCFYHSTPAMIIPP 576 (639)
Q Consensus 514 ~l~~--~~~---~~~--~~~~vwi----vg~~~~~~~q~~a~-~G~~f~~~~~~~~~-----~~R~dc~y~~~~a~~~P~ 576 (639)
.+.. ..+ +++ ++++++| .|.. .+.+..+.+ +|.+++|+...|+. +.|+|.++.+++...-|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~diVi~at~~g~~-~~~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g~~~~g~- 156 (194)
T cd01078 79 GVGAVETSDDAARAAAIKGADVVFAAGAAGVE-LLEKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREGKVPYGA- 156 (194)
T ss_pred cEEEeeCCCHHHHHHHHhcCCEEEECCCCCce-echhhhcccCceeEEEEccCCCCCCcccccccCCceecCCCeEEEe-
Confidence 2221 222 222 6677777 3332 122222233 48999999954443 57899999998733212
Q ss_pred CCccccccccccCcchhhhHHHHHHHHHhcCCCCCccchhhhhHHHHHHHHHhc
Q 006607 577 SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRH 630 (639)
Q Consensus 577 ~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~e~G~iv~~i~~iw~aa~kH 630 (639)
...+++|+++.+||++|.|. +|++..+ .++|-+.|+||
T Consensus 157 ------~~~~g~~~~~~~~~~ae~~~--~~~~~~~--------~~~~~~~~~~~ 194 (194)
T cd01078 157 ------IGVGGLKMKTHRACIAKLFE--SNPLVLD--------AEEIYDLAKEM 194 (194)
T ss_pred ------eccchhHHHHHHHHHHHHhh--cCCeeec--------hHHHHHHHhcC
Confidence 13478999999999999998 4766543 55666666665
No 11
>PLN02434 fatty acid hydroxylase
Probab=99.07 E-value=3e-09 Score=108.74 Aligned_cols=136 Identities=20% Similarity=0.268 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-hhHh-------hhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHH--
Q 006607 128 VILTILVHMGPVEFLYYWFHRA-LHHH-------YLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM-- 197 (639)
Q Consensus 128 li~~lll~llv~Df~~Yw~HRl-lH~~-------~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~-- 197 (639)
.+..+++.+++..+.+|.+||. +|.+ .+....|..||..+ .......++|.-.++....+..++..+.
T Consensus 83 ~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~P--~D~~rLv~PP~~~~~l~~~~~~l~~~~~~~ 160 (237)
T PLN02434 83 VVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKHP--MDGLRLVFPPAATAILCVPFWNLIALFATP 160 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcCC--CCCCCeecCcHHHHHHHHHHHHHHHHHcch
Confidence 4556777888999999999997 7842 23346789999753 3333344666554443322221111100
Q ss_pred -HhhhhhHHHHHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcC-CCCCcCCCcchhhhhcCCCC
Q 006607 198 -VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID 275 (639)
Q Consensus 198 -l~g~~~~~~i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~lWDrLFGT~~ 275 (639)
.....-...+.+|+. .++.....|.+ + |.. ++++. --++|..||.+ .+.|||...++||++|||..
T Consensus 161 ~~a~~~~~G~l~gYl~-Yd~~Hy~lH~~-~--p~~-----~~~r~---lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT~~ 228 (237)
T PLN02434 161 ATAPALFGGGLLGYVM-YDCTHYFLHHG-Q--PST-----DVLRN---LKKYHLNHHFRDQDKGFGITSSLWDRVFGTLP 228 (237)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHhc-C--cch-----HHHHH---HHHHHHHHcCCCCCCCCCcCchHHHHhcCCCC
Confidence 000011223445544 45677777864 2 431 22332 37899999987 59999999999999999985
Q ss_pred CC
Q 006607 276 RS 277 (639)
Q Consensus 276 ~~ 277 (639)
++
T Consensus 229 ~~ 230 (237)
T PLN02434 229 PS 230 (237)
T ss_pred Cc
Confidence 54
No 12
>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]
Probab=97.81 E-value=4.4e-05 Score=76.38 Aligned_cols=136 Identities=21% Similarity=0.291 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH-hhHhh---------hhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHH--
Q 006607 130 LTILVHMGPVEFLYYWFHRA-LHHHY---------LYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM-- 197 (639)
Q Consensus 130 ~~lll~llv~Df~~Yw~HRl-lH~~~---------Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~-- 197 (639)
.-+++.++...+.+|-+||+ +|.+. +---+|..||... ..-.-..++|+-..+....+..++..+.
T Consensus 85 ~~f~~Gvf~WTl~EY~lHRflFH~k~~~~s~~~~t~Hfl~HGcHHk~P--~D~~RLVfPP~~~~il~~pfy~~~~~vl~~ 162 (240)
T KOG0539|consen 85 GLFVIGVFTWTLIEYTLHRFLFHIKPNPDSYWLITLHFLIHGCHHKLP--MDGYRLVFPPTPFAILAAPFYLILSLVLPH 162 (240)
T ss_pred HHHHHHHHHHHHHHHHHHheEEEecCCCCchHHHHHHHHHhcccccCC--CCCceEecCCchHHHHHHHHHHHHHHhcCc
Confidence 34556677899999999997 68541 1124799999753 2223345666665555443333322211
Q ss_pred -HhhhhhHHHHHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcC-CCCCcCCCcchhhhhcCCCC
Q 006607 198 -VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID 275 (639)
Q Consensus 198 -l~g~~~~~~i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~lWDrLFGT~~ 275 (639)
.....-...+++|+.|. .....-|-|-- |+ .|.++ .-.++|.-||-+ .+.-||....+||++|||.-
T Consensus 163 ~~~~a~faG~l~GYV~YD-mtHYyLHhg~p--~~-----~~~~~---~lK~yHl~HHfk~q~~GfGItS~lWD~VFgTl~ 231 (240)
T KOG0539|consen 163 PVAPAGFAGGLLGYVCYD-MTHYYLHHGSP--PK-----RPYLK---HLKKYHLNHHFKHQDLGFGITSSLWDYVFGTLG 231 (240)
T ss_pred chhhhhhccchhhhhhhh-hhhhhhhcCCC--CC-----chHHH---HHHHHHhhhhhhccccCccccHHHHHHHhccCC
Confidence 00011123455676654 44555554311 22 12332 237789999987 79999999999999999987
Q ss_pred CCC
Q 006607 276 RSS 278 (639)
Q Consensus 276 ~~~ 278 (639)
+..
T Consensus 232 ~~~ 234 (240)
T KOG0539|consen 232 PLK 234 (240)
T ss_pred CCc
Confidence 654
No 13
>PLN02601 beta-carotene hydroxylase
Probab=97.48 E-value=0.00094 Score=69.28 Aligned_cols=132 Identities=20% Similarity=0.296 Sum_probs=69.1
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH-hhHhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 006607 118 SNLRFWRSDGVILTILVHMGPVEFLYYWFHRA-LHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTT 196 (639)
Q Consensus 118 ~~lP~w~~~gli~~lll~llv~Df~~Yw~HRl-lH~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~ 196 (639)
.+.|.-...+.+..++..++..|++-+|.||. ||. +.|..|+-||+...- ++. ..+. +++++.+|.+.+
T Consensus 126 g~~p~~em~~~~al~lgtfvgMEf~Aw~aHKYvMHG--~LW~lH~sHH~Pr~g-~FE--~NDl-----FaVifAvpAIaL 195 (303)
T PLN02601 126 GEVSMLEMFGTFALSVGAAVGMEFWARWAHRALWHD--SLWNMHESHHKPREG-AFE--LNDV-----FAIVNAVPAIGL 195 (303)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cchhhhhhcCCCCCC-Ccc--cccc-----hhhhhHHHHHHH
Confidence 45664222223334455566789999999997 776 347899999987642 221 1111 111222333333
Q ss_pred HHhhhhh-----------HHHHHHHH-HHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcC--CCCCcCC
Q 006607 197 MVLKNAS-----------IASFVGYI-IYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYSL 262 (639)
Q Consensus 197 ~l~g~~~-----------~~~i~~y~-~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~--~~~NYG~ 262 (639)
+..|..+ -..+.+|. +|+.+...+.|--+ |......-|+++. -...|.+||+. ...+||.
T Consensus 196 ~~~G~~~~g~~p~~~fgiGlGITlYGiaYffVHDgLVHqRf---p~~~~a~~~Y~rr---l~~AHklHHa~Ke~Gv~FGf 269 (303)
T PLN02601 196 LYYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRF---PVGPIANVPYLRK---VAAAHQLHHTDKFKGVPYGL 269 (303)
T ss_pred HHHhhccccccHHHHHHHHHhHHHHHHHHHHHhhhhhcccc---ccCCCCCCHHHHH---HHHHHHhhccCCcCCccceE
Confidence 2222210 01112232 24444555666432 3322222344554 47899999983 5689998
Q ss_pred Ccc
Q 006607 263 FMP 265 (639)
Q Consensus 263 ~f~ 265 (639)
++.
T Consensus 270 ll~ 272 (303)
T PLN02601 270 FLG 272 (303)
T ss_pred Eec
Confidence 654
No 14
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.32 E-value=0.00045 Score=64.75 Aligned_cols=92 Identities=21% Similarity=0.241 Sum_probs=64.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE----Ec
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VG 532 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg 532 (639)
..++|+++||. ..|++++.+|++.|.+ +++ |+.+|.++|.++.+... -..+...++.+ .+++++| +|
T Consensus 11 ~~~~vlviGaG---g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~-~~~~~~~~~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 11 KGKRVLVIGAG---GAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVN-IEAIPLEDLEEALQEADIVINATPSG 86 (135)
T ss_dssp TTSEEEEESSS---HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCS-EEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred CCCEEEEECCH---HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccc-cceeeHHHHHHHHhhCCeEEEecCCC
Confidence 57899999995 7999999999998988 777 99999999999873322 11122223432 6778877 44
Q ss_pred -CcCChhhhhcCCCCc-eeecccccCCc
Q 006607 533 -DDLTGKEQARAPKGT-IFIPYTQIPPR 558 (639)
Q Consensus 533 -~~~~~~~q~~a~~G~-~f~~~~~~~~~ 558 (639)
..++++....+++.. +++|.+ +|+.
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla-~Pr~ 113 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLA-VPRD 113 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES--SS-S
T ss_pred CcccCHHHHHHHHhhhhceeccc-cCCC
Confidence 356667775444444 899998 6665
No 15
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.25 E-value=0.00058 Score=71.53 Aligned_cols=49 Identities=16% Similarity=0.252 Sum_probs=45.0
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc
Q 006607 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA 511 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~ 511 (639)
...+.++++||++ -||+++|+.|+++|.+|++ |++||+++|++++....
T Consensus 4 ~~~~~~lITGASs--GIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~ 54 (265)
T COG0300 4 MKGKTALITGASS--GIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT 54 (265)
T ss_pred CCCcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh
Confidence 3567899999997 9999999999999999999 99999999999987766
No 16
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.12 E-value=0.00064 Score=70.12 Aligned_cols=44 Identities=25% Similarity=0.323 Sum_probs=41.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
+-|+++||++ -||.|+|+.|++.|.+|.+ |++||+++|++++++
T Consensus 7 kv~lITGASS--GiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~ 52 (246)
T COG4221 7 KVALITGASS--GIGEATARALAEAGAKVVLAARREERLEALADEIGA 52 (246)
T ss_pred cEEEEecCcc--hHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc
Confidence 6789999996 9999999999999999999 999999999999886
No 17
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.00 E-value=0.00087 Score=71.17 Aligned_cols=47 Identities=17% Similarity=0.283 Sum_probs=42.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccc
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ 512 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~ 512 (639)
.=.+|+|||. +||++.|+-|||||.+|.+ |++||++.+++|+.+...
T Consensus 50 ~WAVVTGaTD--GIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~ 98 (312)
T KOG1014|consen 50 SWAVVTGATD--GIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK 98 (312)
T ss_pred CEEEEECCCC--cchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC
Confidence 4567889997 9999999999999999999 999999999999877654
No 18
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.95 E-value=0.002 Score=67.48 Aligned_cols=125 Identities=15% Similarity=0.121 Sum_probs=78.5
Q ss_pred eecCChhHHHHHH-hcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcccccceeee-
Q 006607 444 VVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLS- 518 (639)
Q Consensus 444 vv~Gnsltaa~v~-~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~- 518 (639)
=|||-...++.-- .......++|+|+|+ | -+|++++.+|++.| .+|++ |+.++.+++++++..... +.+
T Consensus 103 NTD~~G~~~~l~~~~~~~~~~k~vlVlGa-G--g~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~---~~~~ 176 (278)
T PRK00258 103 NTDGIGFVRALEERLGVDLKGKRILILGA-G--GAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK---AELD 176 (278)
T ss_pred cccHHHHHHHHHhccCCCCCCCEEEEEcC-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc---eeec
Confidence 4677776666642 233445678999998 6 89999999999999 67888 999999999888653211 111
Q ss_pred cccc-c-cceeEEE----EcC----cCChhhhhcCCCCceeecccccCCc-C----CC-CCceeecCCcccc
Q 006607 519 TSYA-A-HKTKIWL----VGD----DLTGKEQARAPKGTIFIPYTQIPPR-K----LR-KDCFYHSTPAMII 574 (639)
Q Consensus 519 ~~~~-~-~~~~vwi----vg~----~~~~~~q~~a~~G~~f~~~~~~~~~-~----~R-~dc~y~~~~a~~~ 574 (639)
.+.. . ..++++| +|- ..+|-+....++++.++|++--|.. . .| +-|.+..+-.|-+
T Consensus 177 ~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~Ml~ 248 (278)
T PRK00258 177 LELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAWAKAQGARTIDGLGMLV 248 (278)
T ss_pred ccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCcCeecCCHHHHH
Confidence 1222 2 4567777 332 1223333456778888888743322 1 12 5666666666643
No 19
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.90 E-value=0.0023 Score=66.57 Aligned_cols=135 Identities=17% Similarity=0.207 Sum_probs=83.3
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc
Q 006607 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA 522 (639)
Q Consensus 445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 522 (639)
|||-....+.--.......+.|+++|+ | -+|+++|..|++.|.+|++ |+.++.+++.+++.... . +...++.
T Consensus 99 TD~~G~~~~l~~~~~~~~~k~vliiGa-G--g~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~--~-~~~~~~~ 172 (270)
T TIGR00507 99 TDGIGLVSDLERLIPLRPNQRVLIIGA-G--GAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG--E-IQAFSMD 172 (270)
T ss_pred CCHHHHHHHHHhcCCCccCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC--c-eEEechh
Confidence 677777666322122334678999999 6 8999999999999999888 88889998888754311 1 1111222
Q ss_pred --c-cceeEEE----Ec--CcCC--hhhhhcCCCCceeecccccCCc-----CCC-CCceeecCCccccCCCCccccccc
Q 006607 523 --A-HKTKIWL----VG--DDLT--GKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSNMHSCE 585 (639)
Q Consensus 523 --~-~~~~vwi----vg--~~~~--~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~P~~~~~~~~~e 585 (639)
. .+++++| +| ...+ +-+....++|.+++|.+=.|++ +.| +.|.+.++-.|-+= |+..++|
T Consensus 173 ~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~~A~~~G~~~vdG~~Ml~~---Qa~~~f~ 249 (270)
T TIGR00507 173 ELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLAEAKSLGTKTIDGLGMLVA---QAALAFE 249 (270)
T ss_pred hhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeeeCCHHHHHH---HHHHHHH
Confidence 1 4567777 22 1111 1112345788899999865554 223 67888877777542 2333344
Q ss_pred ccc
Q 006607 586 NWL 588 (639)
Q Consensus 586 ~~~ 588 (639)
.|.
T Consensus 250 ~w~ 252 (270)
T TIGR00507 250 LWT 252 (270)
T ss_pred HHc
Confidence 554
No 20
>PLN00203 glutamyl-tRNA reductase
Probab=96.87 E-value=0.0054 Score=70.01 Aligned_cols=212 Identities=14% Similarity=0.185 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHcCCcEEEec-ccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcC----c---CCCcEE
Q 006607 395 INSLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSL----P---KTTAHV 466 (639)
Q Consensus 395 in~~I~~Ai~~A~~~G~kv~~LG-~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i----~---~~~~~V 466 (639)
|=.+|.+|...|++.|.- | .||.- = ...+.+.|.-. =+.++-.|..=.+.++++-. + -..++|
T Consensus 199 IlgQVK~A~~~A~~~g~~----g~~L~~L---F-~~Ai~~~KrVR-teT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkV 269 (519)
T PLN00203 199 ILAQVKQVVKVGQGVDGF----GRNLSGL---F-KHAITAGKRVR-TETNIASGAVSVSSAAVELALMKLPESSHASARV 269 (519)
T ss_pred HHHHHHHHHHHHHHcCCc----cHHHHHH---H-HHHHHHHHHHh-hccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEE
Confidence 334488888888887742 2 11110 0 00222333321 12344444433333333322 3 236899
Q ss_pred EEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEEE----cC-cCC
Q 006607 467 LLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GD-DLT 536 (639)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwiv----g~-~~~ 536 (639)
+|+|+ | ++|+++++.|+.+|. +|++ |+.++.+.++++.+. .........+.. . .+++++|. ++ .++
T Consensus 270 lVIGA-G--~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~ 345 (519)
T PLN00203 270 LVIGA-G--KMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYKPLDEMLACAAEADVVFTSTSSETPLFL 345 (519)
T ss_pred EEEeC-H--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEeecHhhHHHHHhcCCEEEEccCCCCCeeC
Confidence 99999 6 999999999999996 5777 999999999988642 111101112333 2 66777662 22 567
Q ss_pred hhhhhcCCCC-------ceeecccccCCc-C--CC--CCceeecCCccccCCCCccccccccccCcchhhhHHHHHHHH-
Q 006607 537 GKEQARAPKG-------TIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH- 603 (639)
Q Consensus 537 ~~~q~~a~~G-------~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~- 603 (639)
++..+.++++ .+|+|.+ +|+. + +. +++.+.+ -++++. .++-.++.|.-.+=.|+.||-
T Consensus 346 ~e~l~~~~~~~~~~~~~~~~IDLA-vPRdIdp~v~~l~~v~lyd------iDdL~~--i~~~n~~~R~~~~~~Ae~II~e 416 (519)
T PLN00203 346 KEHVEALPPASDTVGGKRLFVDIS-VPRNVGACVSELESARVYN------VDDLKE--VVAANKEDRLRKAMEAQTIIRE 416 (519)
T ss_pred HHHHHHhhhcccccCCCeEEEEeC-CCCCCccccccCCCCeEEE------eccHHH--HHHHhHHHHHHHHHHHHHHHHH
Confidence 7777776542 5899999 8875 2 21 2222111 123332 255567777777777888875
Q ss_pred ---HhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006607 604 ---ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 628 (639)
Q Consensus 604 ---alEgw~~~-e~G~-i--v-~~i~~iw~aa~ 628 (639)
.++.|... +... | + ++.++|-+.-+
T Consensus 417 e~~~F~~w~~~~~~~p~I~~lr~~~~~i~~~El 449 (519)
T PLN00203 417 ESKNFEAWRDSLETVPTIKKLRSYAERIRAAEL 449 (519)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 78888766 6777 5 4 66666655443
No 21
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.80 E-value=0.004 Score=69.05 Aligned_cols=135 Identities=18% Similarity=0.182 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHhhHhhhhhhccccCccccCCChh---------hhhhhhhHHHHHHHHHHHHHHHHHH-Hhhh-----
Q 006607 137 GPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPI---------TSVIHPFAEHIVYFLLFAIPLVTTM-VLKN----- 201 (639)
Q Consensus 137 lv~Df~~Yw~HRllH~~~Ly~~~H~vHH~s~~p~~~---------ta~~~hplE~ll~~~l~~iPl~~~~-l~g~----- 201 (639)
+..|..+=.+|-+.|....+.|.|..||+...++-- +..|+.|.|.++..++-.+|..+.. ....
T Consensus 17 ~~~~~~~d~~h~~~h~~~~l~~~h~~hh~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (406)
T PRK07424 17 LWVEIVRDSYHALAHQWNPLYRLHNWHHRVFRPDLSVVSEEIYRKAHWYNDVPEALVMLLFGTLPVLLLQQWNVPYGWLA 96 (406)
T ss_pred HHHHHHHHHHHHHHhhchHHHHHHHhHHhhcCCcCCcccHHHHhhhhhhcCCHHHHHHHHHhhHHHHHHhhhcccccchh
Confidence 344555555666666544556899999998876532 2458899997665443223322211 1000
Q ss_pred -hhHHHHHHHH---HHHHHHHhhcc-CCcee--ccccchhccCCcccccCChhhHHHhhcCCC-CCcCCCcchhhhhcCC
Q 006607 202 -ASIASFVGYI---IYVDFMNNMGH-CNFEF--IPMWLFTVFPPLKFLMYTPSYHSLHHTQFR-TNYSLFMPIYDYIYGT 273 (639)
Q Consensus 202 -~~~~~i~~y~---~~~~~~~~~~H-sGye~--~P~~~~~~lp~L~~li~tp~~H~lHH~~~~-~NYG~~f~lWDrLFGT 273 (639)
.+......|. +.... .+... ++-+. .|..+.+ ++-.| +..+.||-.||-... .-||..+++.|+..||
T Consensus 97 ~~~~~~~~~~~~~~~~r~~-~~~~~~~~~d~~h~~~~~~~--~~~~~-~v~~~~h~rh~~~~~~~~~~~~~~~~d~~~~t 172 (406)
T PRK07424 97 WLGVLYTLTFLFGAIARGL-GLPNADELTDLTHLPGPFET--LPSQW-FVNRPYHWRHHFDNQNAYYCGTFTLVDKLMGT 172 (406)
T ss_pred hhhhHHHHHHHHHHHHHhc-ccccccccccccCCCCcccC--CCccC-eecCceeEEEEeccccceeeeeEEEeehhcCc
Confidence 0111111121 11111 11112 11111 1432222 12233 457899999998865 7889999999999999
Q ss_pred CC
Q 006607 274 ID 275 (639)
Q Consensus 274 ~~ 275 (639)
..
T Consensus 173 a~ 174 (406)
T PRK07424 173 AL 174 (406)
T ss_pred cc
Confidence 64
No 22
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.73 E-value=0.0029 Score=70.27 Aligned_cols=152 Identities=18% Similarity=0.237 Sum_probs=95.9
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEEE--c-
Q 006607 461 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV--G- 532 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwiv--g- 532 (639)
...++|+++|+ | .+|+.++++|...|. +|++ |+.++.+.++++++... +...+.. . ..++++|. |
T Consensus 180 ~~~~~vlViGa-G--~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~~~~~l~~aDvVI~aT~s 252 (423)
T PRK00045 180 LSGKKVLVIGA-G--EMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEA----IPLDELPEALAEADIVISSTGA 252 (423)
T ss_pred ccCCEEEEECc-h--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcE----eeHHHHHHHhccCCEEEECCCC
Confidence 35679999998 6 999999999999997 6777 88889888888865321 2222333 2 56677662 2
Q ss_pred --CcCChhhhhcC-----CCCceeecccccCCc-C--CC--CCceeecCCccccCCCCccccccccccCcchhhhHHHHH
Q 006607 533 --DDLTGKEQARA-----PKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAG 600 (639)
Q Consensus 533 --~~~~~~~q~~a-----~~G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~ 600 (639)
-.++.++.+.+ .++.+++|.+ +|+. + +. +++.+. .=++++. .++.....|.-.+-.|+.
T Consensus 253 ~~~~i~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~------~vDdl~~--~~~~n~~~r~~~~~~a~~ 323 (423)
T PRK00045 253 PHPIIGKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLY------DVDDLQE--IVEENLAQRQEAAEKAEA 323 (423)
T ss_pred CCcEEcHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEE------EHHHHHH--HHHhhHHHHHHHHHHHHH
Confidence 24555555443 3567899998 6554 1 11 222211 1112221 244566778888899999
Q ss_pred HHH----HhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006607 601 IIH----ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 628 (639)
Q Consensus 601 ~v~----alEgw~~~-e~G~-i--v-~~i~~iw~aa~ 628 (639)
||- .++.|... +... | + +++++|-+.-+
T Consensus 324 ii~~~~~~f~~~~~~~~~~p~I~~lr~~~~~i~~~el 360 (423)
T PRK00045 324 IVEEEVAEFMEWLRSLEVVPTIRALREQAEEIREEEL 360 (423)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 986 67778655 6776 4 3 66666655443
No 23
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.64 E-value=0.012 Score=63.15 Aligned_cols=140 Identities=14% Similarity=0.114 Sum_probs=88.4
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006607 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (639)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig~ 479 (639)
.|+|+++-=-=|..+.+-.--++.+.-+|+ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+- .+|+
T Consensus 64 ~g~K~~~~~p~n~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGaG---~~a~ 140 (325)
T PRK08618 64 LGLKIVSVVPENKKKGKPTIPGTVILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGTG---GQAK 140 (325)
T ss_pred EEEEEEeecCCCcccCCCcceEEEEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECCc---HHHH
Confidence 578887752222212222111234444544 46699999999985 3334555 5678899999998 7899
Q ss_pred HHHHHHh-ccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCcCC-hh-hhhcCCCCceeec
Q 006607 480 AVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT-GK-EQARAPKGTIFIP 551 (639)
Q Consensus 480 ava~~L~-~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~-~~-~q~~a~~G~~f~~ 551 (639)
+.+.+|+ .+++ +|.+ |++++.+++.+++..+.+.......++++ ++++++|....-. |. + .++++|++++.
T Consensus 141 ~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p~i~-~~l~~G~hV~~ 219 (325)
T PRK08618 141 GQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTPVFS-EKLKKGVHINA 219 (325)
T ss_pred HHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCcchH-HhcCCCcEEEe
Confidence 9999887 4454 4455 99999999988765443333223445553 7788877433222 21 2 57799999987
Q ss_pred c
Q 006607 552 Y 552 (639)
Q Consensus 552 ~ 552 (639)
+
T Consensus 220 i 220 (325)
T PRK08618 220 V 220 (325)
T ss_pred c
Confidence 7
No 24
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.56 E-value=0.0052 Score=65.07 Aligned_cols=154 Identities=21% Similarity=0.223 Sum_probs=95.7
Q ss_pred eecCChhHHHHHHhcCcCC--CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeee
Q 006607 444 VVDGSSLAAAVVVNSLPKT--TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLS 518 (639)
Q Consensus 444 vv~Gnsltaa~v~~~i~~~--~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~ 518 (639)
=|||-.+.-+-.=+.++.+ .++|++.||-| -+|||+..|.+.|+ ++++ |+.+|.++|++..++... . ++.
T Consensus 105 NTD~~G~~~~L~~~~~~~~~~~~~vlilGAGG---AarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~-~~~ 179 (283)
T COG0169 105 NTDGIGFLRALKEFGLPVDVTGKRVLILGAGG---AARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-A-VEA 179 (283)
T ss_pred cCCHHHHHHHHHhcCCCcccCCCEEEEECCcH---HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-c-ccc
Confidence 3677777766665565554 48999999998 48999999999995 5777 999999999988665432 1 112
Q ss_pred cc---cccc-ceeEEE----EcCcCCh----hhhhcCCCCceeecccccCCc-----CCC-CCceeecCCccccCCCCcc
Q 006607 519 TS---YAAH-KTKIWL----VGDDLTG----KEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSN 580 (639)
Q Consensus 519 ~~---~~~~-~~~vwi----vg~~~~~----~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~P~~~~~ 580 (639)
.. ++.. +.++.| +|-.-.+ -+-.-.++++++.|+.=.|.+ ..| +=|.+.++..|-+- |+
T Consensus 180 ~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~~idGl~Mlv~---Qa 256 (283)
T COG0169 180 AALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAKTIDGLGMLVH---QA 256 (283)
T ss_pred ccccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCeEECcHHHHHH---HH
Confidence 22 2223 467777 2221111 011235889999888855544 223 56778888777664 44
Q ss_pred ccccccccCcchhhhHHHHHHHHHh
Q 006607 581 MHSCENWLGRRVMSAWRIAGIIHAL 605 (639)
Q Consensus 581 ~~~~e~~~pr~~~~Ac~a~~~v~al 605 (639)
..++|-|.+.+--..=+-+.+..++
T Consensus 257 a~aF~lwtg~~p~~~~~~~a~~~~~ 281 (283)
T COG0169 257 AEAFELWTGVEPPVDVMKEALIEAL 281 (283)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHh
Confidence 5556666655433333333443333
No 25
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.53 E-value=0.0048 Score=59.07 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=32.4
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
|+|+|||| .+|+.+++.|.++|.+|.. |++++.++
T Consensus 1 I~V~GatG--~vG~~l~~~L~~~~~~V~~~~R~~~~~~~ 37 (183)
T PF13460_consen 1 ILVFGATG--FVGRALAKQLLRRGHEVTALVRSPSKAED 37 (183)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTSEEEEEESSGGGHHH
T ss_pred eEEECCCC--hHHHHHHHHHHHCCCEEEEEecCchhccc
Confidence 78999999 9999999999999999999 88887775
No 26
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.36 E-value=0.012 Score=55.17 Aligned_cols=123 Identities=15% Similarity=0.140 Sum_probs=73.1
Q ss_pred cCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcccccceeeecccc
Q 006607 446 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA 522 (639)
Q Consensus 446 ~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 522 (639)
||-.+..|.--..+....++|.++|+ | .+|+++|+.|++.| .+|.+ |+.++.+++.++..... .. ...++.+
T Consensus 2 d~~g~~~a~~~~~~~~~~~~i~iiG~-G--~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~ 76 (155)
T cd01065 2 DGLGFVRALEEAGIELKGKKVLILGA-G--GAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IA-IAYLDLE 76 (155)
T ss_pred CHHHHHHHHHhhCCCCCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cc-eeecchh
Confidence 44444444443344455678999998 7 99999999999885 67777 88888888877754321 00 1122333
Q ss_pred c--cceeEEEE--cCcC---Chh--hhhcCCCCceeecccccCCc-----CCC-CCceeecCCccc
Q 006607 523 A--HKTKIWLV--GDDL---TGK--EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMI 573 (639)
Q Consensus 523 ~--~~~~vwiv--g~~~---~~~--~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~ 573 (639)
+ .+++++|. .... ++. ....+++|+.++|.+-+|+. +.| ..+.+..+..|-
T Consensus 77 ~~~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~ 142 (155)
T cd01065 77 ELLAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEML 142 (155)
T ss_pred hccccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHH
Confidence 2 56667662 1111 111 11235788888888866652 233 456666555553
No 27
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.23 E-value=0.023 Score=60.16 Aligned_cols=124 Identities=16% Similarity=0.176 Sum_probs=76.8
Q ss_pred HHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHH
Q 006607 405 EADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVA 482 (639)
Q Consensus 405 ~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava 482 (639)
.|+++|++|+.+-..+. +.. .|. +.+ -..+.+.+++..+ -..++|.++|. | .+|+++|
T Consensus 108 ~a~~~gi~v~~~~~~~~---va~-------~n~----~~~---Ae~ai~~al~~~~~~l~gk~v~IiG~-G--~iG~avA 167 (287)
T TIGR02853 108 LAADAGVKLIELFERDD---VAI-------YNS----IPT---AEGAIMMAIEHTDFTIHGSNVMVLGF-G--RTGMTIA 167 (287)
T ss_pred HHHHCCCeEEEEEeccc---eEE-------Ecc----HhH---HHHHHHHHHHhcCCCCCCCEEEEEcC-h--HHHHHHH
Confidence 67888888887665331 211 110 000 1123334444432 24679999999 4 8999999
Q ss_pred HHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc---CcCChhhhhcCCCCceeeccc
Q 006607 483 SSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---DDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 483 ~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg---~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+.|...|.+|++ |++++.++.++. .... +...++++ +++++++.- ..++.+...++++|++++|.+
T Consensus 168 ~~L~~~G~~V~v~~R~~~~~~~~~~~-g~~~----~~~~~l~~~l~~aDiVint~P~~ii~~~~l~~~k~~aliIDla 240 (287)
T TIGR02853 168 RTFSALGARVFVGARSSADLARITEM-GLIP----FPLNKLEEKVAEIDIVINTIPALVLTADVLSKLPKHAVIIDLA 240 (287)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHHC-CCee----ecHHHHHHHhccCCEEEECCChHHhCHHHHhcCCCCeEEEEeC
Confidence 999999999998 777766655432 1110 11223333 566776632 235677778899999999999
No 28
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.21 E-value=0.013 Score=67.48 Aligned_cols=59 Identities=19% Similarity=0.363 Sum_probs=49.1
Q ss_pred CChhHHHHHHhcCcC-----CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 447 GSSLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 447 Gnsltaa~v~~~i~~-----~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
|.+.....+.+.+|+ +.+.|+|+||+| .||+++++.|+++|.+|.+ |+.++.+.+.+++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATG--gIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l 124 (576)
T PLN03209 59 GATKFSSAAIEAIPKELDTKDEDLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSV 124 (576)
T ss_pred cchhhhhhhhhccccccccCCCCEEEEECCCC--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence 566666777888875 456899999999 9999999999999999987 8888888776653
No 29
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.13 E-value=0.0072 Score=67.19 Aligned_cols=210 Identities=12% Similarity=0.101 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 006607 395 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR 469 (639)
Q Consensus 395 in~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~-----~~~~V~~~ 469 (639)
|=.+|-+|...|.+.|.-=--|..+=+ ..+.+.|.-. =+.++-.|..=.+.++++-..+ ..++|+|+
T Consensus 116 IlgQVK~A~~~A~~~g~~g~~L~~lf~-------~A~~~aKrVr-teT~I~~~~vSv~~~Av~la~~~~~~l~~kkvlvi 187 (414)
T PRK13940 116 ILGQVKDSYTLSKKNHAIGKELDRVFQ-------KVFATAKRVR-SETRIGHCPVSVAFSAITLAKRQLDNISSKNVLII 187 (414)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHH-------HHHHHHHHHH-hccCCCCCCcCHHHHHHHHHHHHhcCccCCEEEEE
Confidence 334488888888888753221211111 1223334422 2355555555455555554433 45789999
Q ss_pred cccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcC-----cCChhh
Q 006607 470 GTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-----DLTGKE 539 (639)
Q Consensus 470 Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-----~~~~~~ 539 (639)
|+ | ++|+++|.+|+.+|+ ++++ |+.++-++|.++.+... .+....+.+ .+++++|... .++.++
T Consensus 188 Ga-G--~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~---~~~~~~l~~~l~~aDiVI~aT~a~~~vi~~~~ 261 (414)
T PRK13940 188 GA-G--QTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNAS---AHYLSELPQLIKKADIIIAAVNVLEYIVTCKY 261 (414)
T ss_pred cC-c--HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCe---EecHHHHHHHhccCCEEEECcCCCCeeECHHH
Confidence 99 5 899999999999986 5666 88899999988865211 111223332 6677777322 245544
Q ss_pred hhcCCCCceeecccccCCc-C--CC--CCceeecCCccccCCCCccccccccccCcchhhhHHHHHHHH----HhcCCCC
Q 006607 540 QARAPKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEGWDL 610 (639)
Q Consensus 540 q~~a~~G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~----alEgw~~ 610 (639)
.+ .+...++|.+ +|+. + +. +++.+..-- +++. .++-.+..|...+=.|+.||- .++.|..
T Consensus 262 ~~--~~~~~~iDLa-vPRdidp~v~~l~~v~l~~iD------dl~~--i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~ 330 (414)
T PRK13940 262 VG--DKPRVFIDIS-IPQALDPKLGELEQNVYYCVD------DINA--VIEDNKDKRKYESSKAQKIIVKSLEEYLEKEK 330 (414)
T ss_pred hC--CCCeEEEEeC-CCCCCCccccCcCCeEEEeHH------HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 3467999999 7766 2 21 222222111 1221 133345567766667777765 6777865
Q ss_pred C-ccch-h--h-hhHHHHHHHHHh
Q 006607 611 N-ECGQ-T--M-CDIHQVWHASLR 629 (639)
Q Consensus 611 ~-e~G~-i--v-~~i~~iw~aa~k 629 (639)
. ++.+ | + ++.++|-+..++
T Consensus 331 ~~~~~p~I~~lr~~~~~i~~~el~ 354 (414)
T PRK13940 331 AIISNSAIKELFQKADGLVDLSLE 354 (414)
T ss_pred hccchHHHHHHHHHHHHHHHHHHH
Confidence 5 6776 5 4 777777554443
No 30
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=96.10 E-value=0.017 Score=61.40 Aligned_cols=151 Identities=17% Similarity=0.191 Sum_probs=109.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEE----EcCcCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDLT 536 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~~ 536 (639)
-+.++++|-. ++|..||.+|--.|-+|.+..-|..-.||... +++ +++++++ +..+|.| --|+|.
T Consensus 214 GKv~Vv~GYG---dVGKgCaqaLkg~g~~VivTEiDPI~ALQAaM-eG~-----~V~tm~ea~~e~difVTtTGc~dii~ 284 (434)
T KOG1370|consen 214 GKVAVVCGYG---DVGKGCAQALKGFGARVIVTEIDPICALQAAM-EGY-----EVTTLEEAIREVDIFVTTTGCKDIIT 284 (434)
T ss_pred ccEEEEeccC---ccchhHHHHHhhcCcEEEEeccCchHHHHHHh-hcc-----EeeeHHHhhhcCCEEEEccCCcchhh
Confidence 4556666654 99999999999999999997778888887763 232 4777774 7777777 347889
Q ss_pred hhhhhcCCCCceeecccccCCc----CCCCC-------------ceeecCCcccc--CCCCccccccccccCcchhhhHH
Q 006607 537 GKEQARAPKGTIFIPYTQIPPR----KLRKD-------------CFYHSTPAMII--PPSLSNMHSCENWLGRRVMSAWR 597 (639)
Q Consensus 537 ~~~q~~a~~G~~f~~~~~~~~~----~~R~d-------------c~y~~~~a~~~--P~~~~~~~~~e~~~pr~~~~Ac~ 597 (639)
.+...++|.++++|-.-.|+-+ -+|.+ ...+++-.+.+ -+-+-|+. |-.+.|.=+||-.+
T Consensus 285 ~~H~~~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL~-CatghpSFvmS~sf 363 (434)
T KOG1370|consen 285 GEHFDQMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNLG-CATGHPSFVMSNSF 363 (434)
T ss_pred HHHHHhCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeecc-cccCCCceEEecch
Confidence 9999999999999988775543 22211 11222222221 12367787 99999999999999
Q ss_pred HHHHHHHhcCCCCCc----cch-h-hhhHHHH
Q 006607 598 IAGIIHALEGWDLNE----CGQ-T-MCDIHQV 623 (639)
Q Consensus 598 a~~~v~alEgw~~~e----~G~-i-v~~i~~i 623 (639)
.--++.-+|=|++.+ .|- + ..++|+-
T Consensus 364 tnQvlAqIeLwt~p~~kY~~~V~~LPKklDE~ 395 (434)
T KOG1370|consen 364 TNQVLAQIELWTAPEGKYKVGVYVLPKKLDEY 395 (434)
T ss_pred HHHHHHHHHHhcCCCCccccceEecchhhHHH
Confidence 999999999999985 343 2 3778764
No 31
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=96.03 E-value=0.029 Score=60.03 Aligned_cols=140 Identities=18% Similarity=0.101 Sum_probs=85.6
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig 478 (639)
-.|+|+++.--=|....+..--++.+.-+|+ +.-+-+.||+.+|+ |++.+-+ |++.+.+.++|+- ..|
T Consensus 64 ~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGaG---~QA 140 (313)
T PF02423_consen 64 VAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGAG---VQA 140 (313)
T ss_dssp EEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE--S---HHH
T ss_pred EEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECCC---HHH
Confidence 4688888854444433343333444454544 35588999999984 3333333 6678899999987 999
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE----cC---cCChhhhhcCCC
Q 006607 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD---DLTGKEQARAPK 545 (639)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~---~~~~~~q~~a~~ 545 (639)
+.-+++|+ +.-.+|.+ |++++.+++.+++.. .+.....+.+.++ ++++|++. .+ .++.+ |.+|
T Consensus 141 ~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDii~taT~s~~~~P~~~~~---~l~~ 216 (313)
T PF02423_consen 141 RWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVRGADIIVTATPSTTPAPVFDAE---WLKP 216 (313)
T ss_dssp HHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHTTSSEEEE----SSEEESB-GG---GS-T
T ss_pred HHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcccCCEEEEccCCCCCCccccHH---HcCC
Confidence 99999998 55455555 999999999999776 4445345556764 88888772 22 34444 5599
Q ss_pred Cceeecccc
Q 006607 546 GTIFIPYTQ 554 (639)
Q Consensus 546 G~~f~~~~~ 554 (639)
|+++..+.-
T Consensus 217 g~hi~~iGs 225 (313)
T PF02423_consen 217 GTHINAIGS 225 (313)
T ss_dssp T-EEEE-S-
T ss_pred CcEEEEecC
Confidence 999988875
No 32
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.01 E-value=0.036 Score=59.10 Aligned_cols=132 Identities=13% Similarity=0.045 Sum_probs=89.7
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcCcCCCcEEEEecccCchhhHHH
Q 006607 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSLPKTTAHVLLRGTVTANKVANA 480 (639)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i~~~~~~V~~~Gatg~~kig~a 480 (639)
.|+|+++-+ . |+-.++.+.-+|+ +.-..+.||+.+|+ |++.+-..++.+.+.++|+- ..|+.
T Consensus 62 ~g~K~~~~~---~----~~~~g~v~L~d~~TG~p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGaG---~QA~~ 131 (301)
T PRK06407 62 AGLKTYIAG---R----NGARFVVLLFDVNNPELVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGSG---FQAET 131 (301)
T ss_pred eEEEEEecC---C----CCccEEEEEEECCCCCEEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECCc---HHHHH
Confidence 577776642 1 2222344555554 45589999999986 45556567788999999987 89999
Q ss_pred HHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE----EcCc-CChhhhhcCCCCcee
Q 006607 481 VASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDD-LTGKEQARAPKGTIF 549 (639)
Q Consensus 481 va~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~-~~~~~q~~a~~G~~f 549 (639)
-++++| +.-.+|.+ |++++.+++.+++....+....-+.+.++ ++++|++ ..+. ++.+ |.+||+|+
T Consensus 132 ~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P~~~~~---~l~pg~hV 208 (301)
T PRK06407 132 QLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTPIFNRK---YLGDEYHV 208 (301)
T ss_pred HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCcEecHH---HcCCCceE
Confidence 999999 55556666 99999999988876544334223445654 8888877 2222 3344 44789998
Q ss_pred eccc
Q 006607 550 IPYT 553 (639)
Q Consensus 550 ~~~~ 553 (639)
..+-
T Consensus 209 ~aiG 212 (301)
T PRK06407 209 NLAG 212 (301)
T ss_pred EecC
Confidence 8874
No 33
>PRK09186 flagellin modification protein A; Provisional
Probab=96.01 E-value=0.014 Score=58.58 Aligned_cols=44 Identities=18% Similarity=0.249 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 4 ~k~vlItGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~ 49 (256)
T PRK09186 4 GKTILITGAGG--LIGSALVKAILEAGGIVIAADIDKEALNELLESLG 49 (256)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 88888887776653
No 34
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=95.98 E-value=0.065 Score=57.69 Aligned_cols=140 Identities=17% Similarity=0.153 Sum_probs=90.5
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig 478 (639)
-.|+|+++.--=|....|..-.++.+.-+|+ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+- ..|
T Consensus 64 ~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~G---~qA 140 (325)
T TIGR02371 64 MAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGAG---RQA 140 (325)
T ss_pred eEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHH
Confidence 4688888753333323333334445555555 45699999999985 2333445 5688899999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-c---Cc-CChhhhhcCCCCc
Q 006607 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-G---DD-LTGKEQARAPKGT 547 (639)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-g---~~-~~~~~q~~a~~G~ 547 (639)
++-+++|+ ++..+|.+ |++++.+.+.+++.+ .+.....+.+.++ ++++|++. - +. ++++ +.+||+
T Consensus 141 ~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~-~g~~v~~~~~~~eav~~aDiVitaT~s~~P~~~~~---~l~~g~ 216 (325)
T TIGR02371 141 WTQLEALSRVFDLEEVSVYCRTPSTREKFALRASD-YEVPVRAATDPREAVEGCDILVTTTPSRKPVVKAD---WVSEGT 216 (325)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHh-hCCcEEEeCCHHHHhccCCEEEEecCCCCcEecHH---HcCCCC
Confidence 99888877 66677777 999999998887642 2222122335553 77877662 1 22 2333 459999
Q ss_pred eeecccc
Q 006607 548 IFIPYTQ 554 (639)
Q Consensus 548 ~f~~~~~ 554 (639)
+++.+..
T Consensus 217 ~v~~vGs 223 (325)
T TIGR02371 217 HINAIGA 223 (325)
T ss_pred EEEecCC
Confidence 9998863
No 35
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.97 E-value=0.051 Score=57.93 Aligned_cols=139 Identities=12% Similarity=0.091 Sum_probs=90.8
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig 478 (639)
-.|+|+++.--=|..+.|..--++.+.-+|+ +.-.-+.||+.+|+ |++.+-+ +++.++|.++|+- ..|
T Consensus 61 ~~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGaG---~qa 137 (304)
T PRK07340 61 LAITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGTG---VQA 137 (304)
T ss_pred ccEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence 3588887743333323333333445555555 45599999999985 3444555 5688899999995 899
Q ss_pred HHHHHHHhc-cC-cEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE----EcCcCChhhhhcCCCCce
Q 006607 479 NAVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDLTGKEQARAPKGTI 548 (639)
Q Consensus 479 ~ava~~L~~-~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~~~~~q~~a~~G~~ 548 (639)
++.++++|. ++ .++.+ |++++.+++.+++... ... +...+.++ ++++|++ ..+.+=++ +.+||+|
T Consensus 138 ~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~-~~~-~~~~~~~~av~~aDiVitaT~s~~Pl~~~---~~~~g~h 212 (304)
T PRK07340 138 RAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL-GPT-AEPLDGEAIPEAVDLVVTATTSRTPVYPE---AARAGRL 212 (304)
T ss_pred HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc-CCe-eEECCHHHHhhcCCEEEEccCCCCceeCc---cCCCCCE
Confidence 999999983 55 45666 9999999998887532 112 12345553 7788877 22222222 3489999
Q ss_pred eecccc
Q 006607 549 FIPYTQ 554 (639)
Q Consensus 549 f~~~~~ 554 (639)
+..+.-
T Consensus 213 i~~iGs 218 (304)
T PRK07340 213 VVAVGA 218 (304)
T ss_pred EEecCC
Confidence 998873
No 36
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.95 E-value=0.013 Score=61.70 Aligned_cols=61 Identities=16% Similarity=0.102 Sum_probs=43.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEEEcCcCChhhhhc
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR 542 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~ 542 (639)
+|+|+|||| -||+.+++.|.++|.+|.. |+.++...++.. + ..++.||..++++...
T Consensus 2 kIlVtGatG--~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~------------------~-v~~v~~Dl~d~~~l~~ 60 (317)
T CHL00194 2 SLLVIGATG--TLGRQIVRQALDEGYQVRCLVRNLRKASFLKEW------------------G-AELVYGDLSLPETLPP 60 (317)
T ss_pred EEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhc------------------C-CEEEECCCCCHHHHHH
Confidence 699999999 9999999999999999887 665554333211 1 1245667666666666
Q ss_pred CCCC
Q 006607 543 APKG 546 (639)
Q Consensus 543 a~~G 546 (639)
|-+|
T Consensus 61 al~g 64 (317)
T CHL00194 61 SFKG 64 (317)
T ss_pred HHCC
Confidence 5555
No 37
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.016 Score=58.32 Aligned_cols=46 Identities=22% Similarity=0.255 Sum_probs=40.3
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+...+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++++++
T Consensus 6 ~~~~k~ilItGasg--~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 53 (258)
T PRK06949 6 NLEGKVALVTGASS--GLGARFAQVLAQAGAKVVLASRRVERLKELRAEI 53 (258)
T ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 34567899999998 9999999999999999988 8888888887764
No 38
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.87 E-value=0.021 Score=60.33 Aligned_cols=62 Identities=16% Similarity=0.190 Sum_probs=44.1
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cch---hhHHHHHhhCCc
Q 006607 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLRIPV 509 (639)
Q Consensus 445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~---~~~~~l~~~~~~ 509 (639)
|||.-...+.--.......+.|+++|| | -+|+|+|..|++.|.+ |.+ |+. ++.+++.+++..
T Consensus 108 TD~~G~~~~l~~~~~~~~~k~vlI~GA-G--GagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~ 175 (289)
T PRK12548 108 TDGLGFVRNLREHGVDVKGKKLTVIGA-G--GAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ 175 (289)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh
Confidence 555555554432233334578999999 5 7999999999999987 877 765 677777776643
No 39
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.87 E-value=0.024 Score=55.62 Aligned_cols=85 Identities=15% Similarity=0.142 Sum_probs=56.2
Q ss_pred hhHHHHHHhcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccccc
Q 006607 449 SLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH 524 (639)
Q Consensus 449 sltaa~v~~~i~~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 524 (639)
+.++.-.++++.. ..++|+|+|+.. -+|..+|.+|.++|.+|++ |+.+ ++++.+ +
T Consensus 28 ~~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r~~~---~l~~~l----------------~ 86 (168)
T cd01080 28 PAGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHSKTK---NLKEHT----------------K 86 (168)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEECCch---hHHHHH----------------h
Confidence 3444445555543 679999999973 4699999999999999888 4322 222211 2
Q ss_pred ceeEEE----EcCcCChhhhhcCCCCceeecccccCCc
Q 006607 525 KTKIWL----VGDDLTGKEQARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 525 ~~~vwi----vg~~~~~~~q~~a~~G~~f~~~~~~~~~ 558 (639)
+++++| ..+.+++++. ++|++++|++ +|+.
T Consensus 87 ~aDiVIsat~~~~ii~~~~~---~~~~viIDla-~prd 120 (168)
T cd01080 87 QADIVIVAVGKPGLVKGDMV---KPGAVVIDVG-INRV 120 (168)
T ss_pred hCCEEEEcCCCCceecHHHc---cCCeEEEEcc-CCCc
Confidence 344444 1135666654 7899999999 7774
No 40
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.81 E-value=0.021 Score=55.82 Aligned_cols=88 Identities=20% Similarity=0.279 Sum_probs=61.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeecccc-c-cceeEEE--Ec--CcC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG--DDL 535 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--vg--~~~ 535 (639)
.-++|+|+|-- ++|+.||+.|...|.+|++...|....+|... .++ ++.+++ + .+++++| -| +.|
T Consensus 22 ~Gk~vvV~GYG---~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf-----~v~~~~~a~~~adi~vtaTG~~~vi 92 (162)
T PF00670_consen 22 AGKRVVVIGYG---KVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGF-----EVMTLEEALRDADIFVTATGNKDVI 92 (162)
T ss_dssp TTSEEEEE--S---HHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT------EEE-HHHHTTT-SEEEE-SSSSSSB
T ss_pred CCCEEEEeCCC---cccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCc-----EecCHHHHHhhCCEEEECCCCcccc
Confidence 56789999987 99999999999999999996667777776653 333 244554 3 6667766 34 468
Q ss_pred ChhhhhcCCCCceeecccccCCc
Q 006607 536 TGKEQARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 536 ~~~~q~~a~~G~~f~~~~~~~~~ 558 (639)
+.|+...+|.|++++....++-+
T Consensus 93 ~~e~~~~mkdgail~n~Gh~d~E 115 (162)
T PF00670_consen 93 TGEHFRQMKDGAILANAGHFDVE 115 (162)
T ss_dssp -HHHHHHS-TTEEEEESSSSTTS
T ss_pred CHHHHHHhcCCeEEeccCcCcee
Confidence 99999999999999998876655
No 41
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.021 Score=58.38 Aligned_cols=43 Identities=21% Similarity=0.271 Sum_probs=38.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.|+|+|++| -||+++|+.|+++|.+|.+ |++++.++++++.+
T Consensus 3 k~vlVtGasg--~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (276)
T PRK06482 3 KTWFITGASS--GFGRGMTERLLARGDRVAATVRRPDALDDLKARYG 47 (276)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc
Confidence 5799999998 9999999999999999988 88888888877654
No 42
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.018 Score=58.20 Aligned_cols=45 Identities=29% Similarity=0.320 Sum_probs=39.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 8 ~~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 54 (253)
T PRK05867 8 HGKRALITGAST--GIGKRVALAYVEAGAQVAIAARHLDALEKLADEIG 54 (253)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence 457899999997 9999999999999999998 88888888877654
No 43
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=95.77 E-value=0.017 Score=61.60 Aligned_cols=146 Identities=15% Similarity=0.172 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEecc
Q 006607 397 SLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLRGT 471 (639)
Q Consensus 397 ~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~-----~~~~V~~~Ga 471 (639)
.++.+|...|++.|.-=--|..+=+ .-+.+.|.-. -+..+-.|..=++..+++...+ ..++|+++|+
T Consensus 115 gQvk~A~~~a~~~g~~~~~L~~lf~-------~a~~~~k~vr-~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa 186 (311)
T cd05213 115 GQVKNAYKLAKEAGTSGKLLNRLFQ-------KAIKVGKRVR-TETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA 186 (311)
T ss_pred HHHHHHHHHHHHcCCchHHHHHHHH-------HHHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc
Confidence 4488999999988762111111111 0112222211 2244444443333334444433 4788999998
Q ss_pred cCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCcCC-h----hhhh
Q 006607 472 VTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT-G----KEQA 541 (639)
Q Consensus 472 tg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~-~----~~q~ 541 (639)
| .+|+.+++.|+++| .+|++ |+.++.++++++++... +...++++ ..++++|.-..-. + ++..
T Consensus 187 -G--~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~~~~~l~~aDvVi~at~~~~~~~~~~~~~ 259 (311)
T cd05213 187 -G--EMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNA----VPLDELLELLNEADVVISATGAPHYAKIVERAM 259 (311)
T ss_pred -H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeE----EeHHHHHHHHhcCCEEEECCCCCchHHHHHHHH
Confidence 6 99999999999766 56666 88899999988876421 12223332 5677777322211 1 1111
Q ss_pred -cC-CCCceeecccccCCc
Q 006607 542 -RA-PKGTIFIPYTQIPPR 558 (639)
Q Consensus 542 -~a-~~G~~f~~~~~~~~~ 558 (639)
.. .+|.+++|.+ +|+.
T Consensus 260 ~~~~~~~~~viDla-vPrd 277 (311)
T cd05213 260 KKRSGKPRLIVDLA-VPRD 277 (311)
T ss_pred hhCCCCCeEEEEeC-CCCC
Confidence 11 2578899998 6655
No 44
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.75 E-value=0.03 Score=59.47 Aligned_cols=87 Identities=17% Similarity=0.213 Sum_probs=60.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--c-Cc
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--G-DD 534 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g-~~ 534 (639)
..++|+++|+ | .+|++++..|.+.|.+|++ |+.++.+..++ .+... +...++++ ++++++|. . ..
T Consensus 151 ~g~kvlViG~-G--~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~----~~~~~l~~~l~~aDiVI~t~p~~~ 222 (296)
T PRK08306 151 HGSNVLVLGF-G--RTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSP----FHLSELAEEVGKIDIIFNTIPALV 222 (296)
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCee----ecHHHHHHHhCCCCEEEECCChhh
Confidence 4689999997 5 8999999999999999998 66666554432 22211 11223332 56677662 2 23
Q ss_pred CChhhhhcCCCCceeecccccCC
Q 006607 535 LTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 535 ~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
++.+....+++|++++|++ ..|
T Consensus 223 i~~~~l~~~~~g~vIIDla-~~p 244 (296)
T PRK08306 223 LTKEVLSKMPPEALIIDLA-SKP 244 (296)
T ss_pred hhHHHHHcCCCCcEEEEEc-cCC
Confidence 6677778899999999999 444
No 45
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.017 Score=59.27 Aligned_cols=45 Identities=16% Similarity=0.193 Sum_probs=39.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++++++++++..
T Consensus 8 ~k~~lItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 54 (263)
T PRK08339 8 GKLAFTTASSK--GIGFGVARVLARAGADVILLSRNEENLKKAREKIKS 54 (263)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46789999997 9999999999999999998 888888888776543
No 46
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.024 Score=57.76 Aligned_cols=44 Identities=25% Similarity=0.307 Sum_probs=39.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.++++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++.
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (261)
T PRK08265 6 GKVAIVTGGAT--LIGAAVARALVAAGARVAIVDIDADNGAAVAASLG 51 (261)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 46899999998 9999999999999999998 88888888877763
No 47
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.71 E-value=0.019 Score=57.39 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=35.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 5 ~~vlItGa~g--~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 49 (250)
T PRK08063 5 KVALVTGSSR--GIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI 49 (250)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 5799999998 9999999999999999765 7777777666654
No 48
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.68 E-value=0.077 Score=56.76 Aligned_cols=139 Identities=21% Similarity=0.190 Sum_probs=86.6
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig 478 (639)
-.|+|+++---=|....+-.--++.+.-+++ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+ | ..|
T Consensus 61 ~~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~-G--~~a 137 (314)
T PRK06141 61 YIGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGT-G--RLA 137 (314)
T ss_pred eeEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECC-c--HHH
Confidence 3588888843323222232222345555554 45599999999984 2333333 567889999996 5 999
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEEE----cCc-CChhhhhcCCCCc
Q 006607 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GDD-LTGKEQARAPKGT 547 (639)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwiv----g~~-~~~~~q~~a~~G~ 547 (639)
+.++++++ +...+|.+ |++++.+++.+++... +....-..+.+ + ++++|++. .+. ++. .+.++|+
T Consensus 138 ~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~-g~~~~~~~~~~~av~~aDIVi~aT~s~~pvl~~---~~l~~g~ 213 (314)
T PRK06141 138 SLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQ-GFDAEVVTDLEAAVRQADIISCATLSTEPLVRG---EWLKPGT 213 (314)
T ss_pred HHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhc-CCceEEeCCHHHHHhcCCEEEEeeCCCCCEecH---HHcCCCC
Confidence 99999888 34467777 9999999998886432 11211223455 3 67777662 111 222 3568999
Q ss_pred eeeccc
Q 006607 548 IFIPYT 553 (639)
Q Consensus 548 ~f~~~~ 553 (639)
++..+.
T Consensus 214 ~i~~ig 219 (314)
T PRK06141 214 HLDLVG 219 (314)
T ss_pred EEEeeC
Confidence 766554
No 49
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.66 E-value=0.048 Score=62.38 Aligned_cols=146 Identities=19% Similarity=0.244 Sum_probs=90.3
Q ss_pred EEEeecccCcccceeEEeeccCcccccchhhHHHHHHHHHHHHHHHHcCCc--EEEecccccc------cccccCCceee
Q 006607 362 FVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVK--VISLGLLNQG------EELNRNGEIYL 433 (639)
Q Consensus 362 f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~I~~Ai~~A~~~G~k--v~~LG~ln~~------e~ln~~g~~~~ 433 (639)
|+=+.-.+.+.+.+- +|-+|. ++ -...+++.+++ +++...+++. +.+|..| +.+
T Consensus 146 fiDdd~~~~g~~i~G--v~V~g~--------------~~-i~~~v~~~~~~~iiiAips~~~~~~~~i~~~l~~~~-~~v 207 (588)
T COG1086 146 FLDDDPDLTGMKIRG--VPVLGR--------------IE-IERVVEELGIQLILIAIPSASQEERRRILLRLARTG-IAV 207 (588)
T ss_pred EECCChhhcCCEEec--eeeech--------------hH-HHHHHHHcCCceEEEecCCCCHHHHHHHHHHHHhcC-CcE
Confidence 444444444444443 666664 44 44456777777 6666666665 5677777 566
Q ss_pred ecCCCCcceeeecCChhHHHHHHhcCcC--------------------CCcEEEEecccCchhhHHHHHHHHhccCcEEE
Q 006607 434 ERQPNKLKIKVVDGSSLAAAVVVNSLPK--------------------TTAHVLLRGTVTANKVANAVASSLCQMGIKVA 493 (639)
Q Consensus 434 ~k~p~~L~irvv~Gnsltaa~v~~~i~~--------------------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~ 493 (639)
..-|+ +.. +++ .+.-+++|.- +.+.|+++||+| +||+.+|+-+++.+.+.+
T Consensus 208 ~~lP~-~~~-l~~-----~~~~lreI~ieDLLgR~pV~~d~~~i~~~~~gK~vLVTGagG--SiGsel~~qil~~~p~~i 278 (588)
T COG1086 208 RILPQ-LTD-LKD-----LNGQLREIEIEDLLGRPPVALDTELIGAMLTGKTVLVTGGGG--SIGSELCRQILKFNPKEI 278 (588)
T ss_pred EecCc-HHH-HHH-----hccccccCCHHHHhCCCCCCCCHHHHHhHcCCCEEEEeCCCC--cHHHHHHHHHHhcCCCEE
Confidence 66666 431 111 1111344421 478999999999 999999999997777766
Q ss_pred e---cchhhHHHHHhhCCcccccceeeecccccccee-EEEEcCcCChhhhhcCCCC
Q 006607 494 T---ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTK-IWLVGDDLTGKEQARAPKG 546 (639)
Q Consensus 494 ~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-vwivg~~~~~~~q~~a~~G 546 (639)
+ +++-....+++++.+..+ + .| .-+.||.-|.+-...|-.|
T Consensus 279 ~l~~~~E~~~~~i~~el~~~~~-~-----------~~~~~~igdVrD~~~~~~~~~~ 323 (588)
T COG1086 279 ILFSRDEYKLYLIDMELREKFP-E-----------LKLRFYIGDVRDRDRVERAMEG 323 (588)
T ss_pred EEecCchHHHHHHHHHHHhhCC-C-----------cceEEEecccccHHHHHHHHhc
Confidence 6 777777777777665442 1 22 2456777777666555444
No 50
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.66 E-value=0.026 Score=59.65 Aligned_cols=127 Identities=15% Similarity=0.102 Sum_probs=73.9
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCccccc-ceeeecc
Q 006607 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQH-NLVLSTS 520 (639)
Q Consensus 445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~-~l~~~~~ 520 (639)
|||-....+.--+......++|++.|+- -.|+|+|..|++.|+ ++++ |+.+|.++|.+++...... ......+
T Consensus 109 TD~~G~~~~l~~~~~~~~~k~vlIlGaG---Gaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~ 185 (284)
T PRK12549 109 TDWSGFAESFRRGLPDASLERVVQLGAG---GAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD 185 (284)
T ss_pred CCHHHHHHHHHhhccCccCCEEEEECCc---HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc
Confidence 5565555544322122345789999997 589999999999998 6777 8999999998876433211 1111112
Q ss_pred cc-c-cceeEEE----EcCcC---ChhhhhcCCCCceeecccccCCc-----CCC-CCceeecCCcccc
Q 006607 521 YA-A-HKTKIWL----VGDDL---TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 574 (639)
Q Consensus 521 ~~-~-~~~~vwi----vg~~~---~~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~ 574 (639)
+. + ++++++| +|-.- .|-+....+++..+.|++--|+. .-| +-|....+..|-+
T Consensus 186 ~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~ML~ 254 (284)
T PRK12549 186 LAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLETELLRAARALGCRTLDGGGMAV 254 (284)
T ss_pred hHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCCHHHHHHHHCCCeEecCHHHHH
Confidence 22 2 5677877 33110 11122345677777777733322 112 4566666666643
No 51
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.024 Score=56.63 Aligned_cols=43 Identities=21% Similarity=0.356 Sum_probs=37.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| .||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 6 ~k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (241)
T PRK07454 6 MPRALITGASS--GIGKATALAFAKAGWDLALVARSQDALEALAAEL 50 (241)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 8888777776654
No 52
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.55 E-value=0.028 Score=56.76 Aligned_cols=45 Identities=20% Similarity=0.213 Sum_probs=38.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| .||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 9 ~~k~vlItGa~g--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~ 55 (255)
T PRK07523 9 TGRRALVTGSSQ--GIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLK 55 (255)
T ss_pred CCCEEEEECCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 356899999998 9999999999999999998 88887777766653
No 53
>PRK06196 oxidoreductase; Provisional
Probab=95.54 E-value=0.024 Score=59.64 Aligned_cols=56 Identities=16% Similarity=0.126 Sum_probs=45.8
Q ss_pred HHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 451 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 451 taa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
++..+++.++...+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasg--gIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~ 71 (315)
T PRK06196 14 TAEEVLAGHDLSGKTAIVTGGYS--GLGLETTRALAQAGAHVIVPARRPDVAREALAGID 71 (315)
T ss_pred cHHHHhcCCCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh
Confidence 35555666665567899999998 9999999999999999998 88888887766653
No 54
>PRK06823 ornithine cyclodeaminase; Validated
Probab=95.50 E-value=0.12 Score=55.49 Aligned_cols=139 Identities=17% Similarity=0.084 Sum_probs=88.9
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-Ccceeee-cCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVV-DGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv-~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig 478 (639)
.|+|+++.--=|....+-.--++.+.-+|+ +.-+.+. ||+.+|+ |+..+-+ +++.+++.++|+- ..|
T Consensus 64 ~g~K~v~~~p~N~~~glP~~~g~v~l~d~~TG~p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~G---~qA 140 (315)
T PRK06823 64 FVVKVSTGFYDNPAQGLPSNQGLMLAFSAKTGEPQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGTG---IQA 140 (315)
T ss_pred EEEEEEeecCCCccCCCCCeeEEEEEEECCCCceEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECCc---HHH
Confidence 567777643333322232223334444555 3446675 9999975 3334444 6788999999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE----cCc-CChhhhhcCCCCc
Q 006607 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GDD-LTGKEQARAPKGT 547 (639)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~~-~~~~~q~~a~~G~ 547 (639)
+.-++++| +.-.+|.+ |++++-+++++++.+. +....-+.+.++ ++++|++. .+. ++.+ |.+||+
T Consensus 141 ~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIV~taT~s~~P~~~~~---~l~~G~ 216 (315)
T PRK06823 141 RMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL-GFAVNTTLDAAEVAHAANLIVTTTPSREPLLQAE---DIQPGT 216 (315)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc-CCcEEEECCHHHHhcCCCEEEEecCCCCceeCHH---HcCCCc
Confidence 99999999 66677777 9999999988776432 233222335654 78888772 122 3333 458999
Q ss_pred eeecccc
Q 006607 548 IFIPYTQ 554 (639)
Q Consensus 548 ~f~~~~~ 554 (639)
++..+.-
T Consensus 217 hi~~iGs 223 (315)
T PRK06823 217 HITAVGA 223 (315)
T ss_pred EEEecCC
Confidence 9998863
No 55
>PRK06046 alanine dehydrogenase; Validated
Probab=95.47 E-value=0.11 Score=55.87 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=88.5
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig 478 (639)
..|+|+++.--=|..+.+..-.++.+.-+++ +.-..+.||+.+|+ |++.+-+ +++.+.|.++|+- ..|
T Consensus 65 ~~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~G---~qa 141 (326)
T PRK06046 65 IAGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGAG---NQA 141 (326)
T ss_pred eEEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence 4678888754334333333322345555544 45589999999985 2333555 6788899999987 789
Q ss_pred HHHHHHHh-ccCcEEEe---cchhhHHHHHhhCCcccccceeeeccccc-cceeEEEEcC-----cCChhhhhcCCCCce
Q 006607 479 NAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGD-----DLTGKEQARAPKGTI 548 (639)
Q Consensus 479 ~ava~~L~-~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg~-----~~~~~~q~~a~~G~~ 548 (639)
++.++.|+ .++++... |++++.+++++++.+..........++++ ..+++++.-. .++.+ +.++|+|
T Consensus 142 ~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~aDiVv~aTps~~P~~~~~---~l~~g~h 218 (326)
T PRK06046 142 RTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACDCDILVTTTPSRKPVVKAE---WIKEGTH 218 (326)
T ss_pred HHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhhCCEEEEecCCCCcEecHH---HcCCCCE
Confidence 99999998 44555544 89999999888865433322112335554 2277755211 12232 4589999
Q ss_pred eecccc
Q 006607 549 FIPYTQ 554 (639)
Q Consensus 549 f~~~~~ 554 (639)
+..+.-
T Consensus 219 V~~iGs 224 (326)
T PRK06046 219 INAIGA 224 (326)
T ss_pred EEecCC
Confidence 988863
No 56
>PRK06924 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.031 Score=56.08 Aligned_cols=41 Identities=24% Similarity=0.372 Sum_probs=33.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~ 506 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |++ ++++++.++
T Consensus 2 k~vlItGasg--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~ 45 (251)
T PRK06924 2 RYVIITGTSQ--GLGEAIANQLLEKGTHVISISRTENKELTKLAEQ 45 (251)
T ss_pred cEEEEecCCc--hHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc
Confidence 4799999998 9999999999999999988 655 556655443
No 57
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.029 Score=56.53 Aligned_cols=44 Identities=18% Similarity=0.289 Sum_probs=38.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 6 ~k~~lItGas~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (254)
T PRK07478 6 GKVAIITGASS--GIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIR 51 (254)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 88888888877653
No 58
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.38 E-value=0.031 Score=55.95 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=37.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| .||+++|+.|.++|.+|.+ |++++.+++++++
T Consensus 5 ~~vlItG~sg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 48 (258)
T PRK12429 5 KVALVTGAAS--GIGLEIALALAKEGAKVVIADLNDEAAAAAAEAL 48 (258)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 6899999998 9999999999999999988 8888888777664
No 59
>PRK07589 ornithine cyclodeaminase; Validated
Probab=95.35 E-value=0.11 Score=56.67 Aligned_cols=139 Identities=14% Similarity=0.005 Sum_probs=91.6
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (639)
Q Consensus 408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig 478 (639)
-.|+|+++.=-=|....+-.--++.+.-+|+ +.-+-+.||+.+|+ |+..+-+ +++.+.+.++|+- ..|
T Consensus 65 ~~gvK~v~~~p~N~~~glP~i~g~v~L~D~~TG~p~Alldg~~lT~~RTaA~sala~~~Lar~da~~l~iiGaG---~QA 141 (346)
T PRK07589 65 LYSFKYVNGHPKNTRRGLQTVMAFGVLADVDTGYPLLLSEMTLLTALRTAATSALAAKYLARPDSRTMALIGNG---AQS 141 (346)
T ss_pred ceEEEEEeeCCCccccCCCceeEEEEEEECCCCCEEEEEcCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HHH
Confidence 3678877643324333343333444455544 45589999999984 3344555 6788899999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcC-------cCChhhhhcCCC
Q 006607 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-------DLTGKEQARAPK 545 (639)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-------~~~~~~q~~a~~ 545 (639)
+.-++++| +.-.+|.+ |++++.+++.+++... +.+..-+.+.++ ++++|++-=. .++. +|.++
T Consensus 142 ~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIIvtaT~S~~~~Pvl~~---~~lkp 217 (346)
T PRK07589 142 EFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP-GLRIVACRSVAEAVEGADIITTVTADKTNATILTD---DMVEP 217 (346)
T ss_pred HHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc-CCcEEEeCCHHHHHhcCCEEEEecCCCCCCceecH---HHcCC
Confidence 99998888 66667777 9999999998887542 223223345664 7888877311 1233 35699
Q ss_pred Cceeeccc
Q 006607 546 GTIFIPYT 553 (639)
Q Consensus 546 G~~f~~~~ 553 (639)
|+|+..+-
T Consensus 218 G~hV~aIG 225 (346)
T PRK07589 218 GMHINAVG 225 (346)
T ss_pred CcEEEecC
Confidence 99988764
No 60
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.33 E-value=0.0097 Score=57.29 Aligned_cols=102 Identities=24% Similarity=0.286 Sum_probs=66.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--E------
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--V------ 531 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--v------ 531 (639)
++|-++|-- .+|+++|+.|.+.|.+|.. |++++.++++++- . ....+.++ +.+++++ +
T Consensus 2 ~~Ig~IGlG---~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-~------~~~~s~~e~~~~~dvvi~~v~~~~~v 71 (163)
T PF03446_consen 2 MKIGFIGLG---NMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-A------EVADSPAEAAEQADVVILCVPDDDAV 71 (163)
T ss_dssp BEEEEE--S---HHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-E------EEESSHHHHHHHBSEEEE-SSSHHHH
T ss_pred CEEEEEchH---HHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-h------hhhhhhhhHhhcccceEeecccchhh
Confidence 478899984 9999999999999999999 8899999988772 1 11334443 5565544 2
Q ss_pred cCcCChhh-hhcCCCCceeecccccCCc-------CCC-CCceeecCCccccC
Q 006607 532 GDDLTGKE-QARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIP 575 (639)
Q Consensus 532 g~~~~~~~-q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P 575 (639)
.+.+..++ ...+++|+++++.+-.+|+ +++ +.+.|.+.|.+-=|
T Consensus 72 ~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~ 124 (163)
T PF03446_consen 72 EAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSGGP 124 (163)
T ss_dssp HHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHH
T ss_pred hhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeeccc
Confidence 12222211 2346899999999998887 222 67889888876544
No 61
>PRK07326 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.036 Score=55.00 Aligned_cols=45 Identities=22% Similarity=0.240 Sum_probs=38.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.|+++|++| .||+++|+.|.++|.+|.+ |+.++.+++.+++..
T Consensus 6 ~~~ilItGatg--~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~ 52 (237)
T PRK07326 6 GKVALITGGSK--GIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN 52 (237)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc
Confidence 36799999998 9999999999999999988 888888877776543
No 62
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.28 E-value=0.032 Score=55.81 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=36.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 2 ~~vlItGa~g--~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 45 (255)
T TIGR01963 2 KTALVTGAAS--GIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA 45 (255)
T ss_pred CEEEEcCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4699999998 9999999999999999988 8888887777654
No 63
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.28 E-value=0.091 Score=57.60 Aligned_cols=92 Identities=14% Similarity=0.169 Sum_probs=65.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-----cC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----GD 533 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----g~ 533 (639)
.++|+|+|+ | .+|+.+|+.|.+.|.+|.+ ++.++.+.++++.+........+...+++ +.++++|- |+
T Consensus 167 ~~~VlViGa-G--~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 167 PGDVTIIGG-G--VVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CceEEEEcC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 355999999 6 9999999999999999888 78888888877654321100001112332 56677663 32
Q ss_pred ----cCChhhhhcCCCCceeecccccCCc
Q 006607 534 ----DLTGKEQARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 534 ----~~~~~~q~~a~~G~~f~~~~~~~~~ 558 (639)
.++.+..+.+++|.+++|++ +++-
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva-~d~G 271 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVA-IDQG 271 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEe-cCCC
Confidence 26888999999999999999 7776
No 64
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.039 Score=55.84 Aligned_cols=43 Identities=16% Similarity=0.299 Sum_probs=38.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++++
T Consensus 2 k~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 46 (260)
T PRK08267 2 KSIFITGAAS--GIGRATALLFAAEGWRVGAYDINEAGLAALAAELG 46 (260)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999998 88998888877765
No 65
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.26 E-value=0.041 Score=55.60 Aligned_cols=44 Identities=25% Similarity=0.258 Sum_probs=38.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 6 ~~~vlItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (257)
T PRK07067 6 GKVALLTGAAS--GIGEAVAERYLAEGARVVIADIKPARARLAALEIG 51 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC
Confidence 46799999998 9999999999999999988 88888888877654
No 66
>PRK08643 acetoin reductase; Validated
Probab=95.25 E-value=0.035 Score=55.94 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=37.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 3 k~~lItGas~--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 47 (256)
T PRK08643 3 KVALVTGAGQ--GIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLS 47 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 88888888877653
No 67
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.033 Score=56.03 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=38.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 5 ~k~vlItGa~~--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (258)
T PRK07890 5 GKVVVVSGVGP--GLGRTLAVRAARAGADVVLAARTAERLDEVAAEID 50 (258)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 36799999998 9999999999999999998 88888887776653
No 68
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.037 Score=59.27 Aligned_cols=45 Identities=24% Similarity=0.313 Sum_probs=39.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++++++.
T Consensus 7 ~~k~vlITGas~--gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~ 53 (334)
T PRK07109 7 GRQVVVITGASA--GVGRATARAFARRGAKVVLLARGEEGLEALAAEIR 53 (334)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 356899999998 9999999999999999988 88888888877753
No 69
>PRK06194 hypothetical protein; Provisional
Probab=95.19 E-value=0.036 Score=56.95 Aligned_cols=43 Identities=14% Similarity=0.251 Sum_probs=37.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++++.+++.
T Consensus 7 k~vlVtGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (287)
T PRK06194 7 KVAVITGAAS--GFGLAFARIGAALGMKLVLADVQQDALDRAVAELR 51 (287)
T ss_pred CEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 77777777766643
No 70
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.19 E-value=0.023 Score=60.56 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=40.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.|+++||+| -||+++|+.|+++|.+|.+ |++++++++++++..
T Consensus 53 g~~~lITGAs~--GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~ 99 (320)
T PLN02780 53 GSWALVTGPTD--GIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS 99 (320)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
Confidence 35789999997 9999999999999999998 999999998887643
No 71
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.18 E-value=0.044 Score=55.67 Aligned_cols=44 Identities=18% Similarity=0.279 Sum_probs=39.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.++++
T Consensus 6 ~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (263)
T PRK06200 6 GQVALITGGGS--GIGRALVERFLAEGARVAVLERSAEKLASLRQRFG 51 (263)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 35799999997 9999999999999999988 88889998887764
No 72
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.18 E-value=0.084 Score=59.70 Aligned_cols=141 Identities=18% Similarity=0.184 Sum_probs=93.3
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec-
Q 006607 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG- 532 (639)
Q Consensus 460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg- 532 (639)
.-..++|.|+|.- .||+++|+.|...|.+|+. ++..+. ++... .+. +..++++ +.+++++ .|
T Consensus 251 ~LaGKtVgVIG~G---~IGr~vA~rL~a~Ga~ViV~e~dp~~a--~~A~~-~G~-----~~~~leell~~ADIVI~atGt 319 (476)
T PTZ00075 251 MIAGKTVVVCGYG---DVGKGCAQALRGFGARVVVTEIDPICA--LQAAM-EGY-----QVVTLEDVVETADIFVTATGN 319 (476)
T ss_pred CcCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhH--HHHHh-cCc-----eeccHHHHHhcCCEEEECCCc
Confidence 3357789999976 8999999999999999988 343332 22111 111 1234443 5667766 23
Q ss_pred -CcCChhhhhcCCCCceeecccccCCc----CCC--CC--ceee--cCCccccCC----------CCccccccccccCcc
Q 006607 533 -DDLTGKEQARAPKGTIFIPYTQIPPR----KLR--KD--CFYH--STPAMIIPP----------SLSNMHSCENWLGRR 591 (639)
Q Consensus 533 -~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R--~d--c~y~--~~~a~~~P~----------~~~~~~~~e~~~pr~ 591 (639)
..++.+....+++|++++.+++++.+ .++ .| +.-. ......+|. .+-|+. |-.+.|..
T Consensus 320 ~~iI~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~-~~~GhP~~ 398 (476)
T PTZ00075 320 KDIITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLG-CATGHPSF 398 (476)
T ss_pred ccccCHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccC-CCCCCCee
Confidence 46888999999999999999997633 122 11 1111 111122442 366787 88999999
Q ss_pred hhhhHHHHHHHHHhcCCCCCc
Q 006607 592 VMSAWRIAGIIHALEGWDLNE 612 (639)
Q Consensus 592 ~~~Ac~a~~~v~alEgw~~~e 612 (639)
+|+-.++--.+-.+|=|..++
T Consensus 399 vMd~sfa~Q~la~~~l~~~~~ 419 (476)
T PTZ00075 399 VMSNSFTNQVLAQIELWENRD 419 (476)
T ss_pred EeeHHHHHHHHHHHHHHhccC
Confidence 999998887777777776544
No 73
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.18 E-value=0.049 Score=54.28 Aligned_cols=44 Identities=14% Similarity=0.273 Sum_probs=38.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|.++|.+|++ |+.++.+++.+++.
T Consensus 5 ~~~vlItGasg--~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (251)
T PRK07231 5 GKVAIVTGASS--GIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL 50 (251)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 35899999998 9999999999999999988 88888887766654
No 74
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.043 Score=55.11 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=35.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+.|+|+|++| -||+++++.|+++|.+|.. |+.++.+++++.
T Consensus 3 ~~vlVtGasg--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 45 (257)
T PRK09291 3 KTILITGAGS--GFGREVALRLARKGHNVIAGVQIAPQVTALRAE 45 (257)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4799999998 9999999999999999988 777777766654
No 75
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.054 Score=55.74 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=37.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+.+++..
T Consensus 4 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~ 48 (277)
T PRK06180 4 MKTWLITGVSS--GFGRALAQAALAAGHRVVGTVRSEAARADFEALH 48 (277)
T ss_pred CCEEEEecCCC--hHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc
Confidence 45799999998 9999999999999999998 8888888877653
No 76
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.05 E-value=0.051 Score=54.79 Aligned_cols=45 Identities=16% Similarity=0.316 Sum_probs=38.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 8 ~~k~~lItGas~--giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~ 54 (254)
T PRK08085 8 AGKNILITGSAQ--GIGFLLATGLAEYGAEIIINDITAERAELAVAKLR 54 (254)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH
Confidence 456899999998 9999999999999999999 88888877766653
No 77
>PRK06139 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.038 Score=59.27 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=39.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 7 ~k~vlITGAs~--GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~ 52 (330)
T PRK06139 7 GAVVVITGASS--GIGQATAEAFARRGARLVLAARDEEALQAVAEECR 52 (330)
T ss_pred CCEEEEcCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 46899999997 9999999999999999999 99999988877753
No 78
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.03 E-value=0.03 Score=62.25 Aligned_cols=89 Identities=21% Similarity=0.272 Sum_probs=67.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc----
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---- 532 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg---- 532 (639)
..++|+++||. ++|.-+|.+|+++|++.++ |+.+|-++|.++++.+. +....+.+ .++||+|.+
T Consensus 177 ~~~~vlvIGAG---em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~----~~l~el~~~l~~~DvVissTsa~ 249 (414)
T COG0373 177 KDKKVLVIGAG---EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA----VALEELLEALAEADVVISSTSAP 249 (414)
T ss_pred ccCeEEEEccc---HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee----ecHHHHHHhhhhCCEEEEecCCC
Confidence 68899999998 9999999999999966555 99999999999988332 22333443 777888844
Q ss_pred -CcCChhhhhcC---CCCceeecccccCCc
Q 006607 533 -DDLTGKEQARA---PKGTIFIPYTQIPPR 558 (639)
Q Consensus 533 -~~~~~~~q~~a---~~G~~f~~~~~~~~~ 558 (639)
-+++.++.+.+ +++..++|++ +|+.
T Consensus 250 ~~ii~~~~ve~a~~~r~~~livDia-vPRd 278 (414)
T COG0373 250 HPIITREMVERALKIRKRLLIVDIA-VPRD 278 (414)
T ss_pred ccccCHHHHHHHHhcccCeEEEEec-CCCC
Confidence 34566655554 4447899999 8887
No 79
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.02 E-value=0.047 Score=55.00 Aligned_cols=45 Identities=16% Similarity=0.159 Sum_probs=38.8
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
...+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 9 ~~~k~ilItGas~--~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 55 (256)
T PRK06124 9 LAGQVALVTGSAR--GLGFEIARALAGAGAHVLVNGRNAATLEAAVAAL 55 (256)
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence 3467899999998 9999999999999999999 8778777776664
No 80
>PRK06199 ornithine cyclodeaminase; Validated
Probab=95.02 E-value=0.15 Score=56.26 Aligned_cols=155 Identities=13% Similarity=0.115 Sum_probs=100.6
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006607 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (639)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig~ 479 (639)
.|+|+++.=-=|....+..-.++.+.-+|+ +.-.-+.||+.+|+ |+..+-+ +++.+.+.++|+- -.|+
T Consensus 92 ~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~G---~QA~ 168 (379)
T PRK06199 92 AGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGPG---VMGK 168 (379)
T ss_pred eEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECCc---HHHH
Confidence 577877753334433444445556656665 45589999999985 4445556 6788999999987 8999
Q ss_pred HHHHHHhc--c-CcEEEe--cchhhHHHHHhhCCccccc--ceeeeccccc--cceeEEEEcC-----------cCChhh
Q 006607 480 AVASSLCQ--M-GIKVAT--ICKDDYEKLKLRIPVEAQH--NLVLSTSYAA--HKTKIWLVGD-----------DLTGKE 539 (639)
Q Consensus 480 ava~~L~~--~-~~~v~~--~~~~~~~~l~~~~~~~~~~--~l~~~~~~~~--~~~~vwivg~-----------~~~~~~ 539 (639)
.-++++|+ + -.+|.+ |++++.+++.+++...... ...-+.+.++ ++++|++.-. .++.+
T Consensus 169 ~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s~~~~~s~~Pv~~~~- 247 (379)
T PRK06199 169 TILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSGETGDPSTYPYVKRE- 247 (379)
T ss_pred HHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCCCCCCCCcCcEecHH-
Confidence 99999984 3 346666 9999999998887654321 2223445664 8888877322 23333
Q ss_pred hhcCCCCceeecccc--cCCcCCCCC-ceeecC
Q 006607 540 QARAPKGTIFIPYTQ--IPPRKLRKD-CFYHST 569 (639)
Q Consensus 540 q~~a~~G~~f~~~~~--~~~~~~R~d-c~y~~~ 569 (639)
|.+||+|+.-... +|+.-+++| ..|-+.
T Consensus 248 --~lkpG~hv~~ig~~eld~~~l~~~a~vvvD~ 278 (379)
T PRK06199 248 --WVKPGAFLLMPAACRIDEGMEQGDVRKVVDN 278 (379)
T ss_pred --HcCCCcEEecCCcccCCHHHHhCCCcEEEcC
Confidence 4589999875432 555555553 344443
No 81
>PRK05717 oxidoreductase; Validated
Probab=95.02 E-value=0.065 Score=54.19 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=37.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ +++++.+++.+++
T Consensus 9 ~~k~vlItG~sg--~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~ 54 (255)
T PRK05717 9 NGRVALVTGAAR--GIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL 54 (255)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc
Confidence 456899999998 9999999999999999988 6777777766554
No 82
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.01 E-value=0.072 Score=56.65 Aligned_cols=150 Identities=21% Similarity=0.271 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeec-CCCCcce----------eeecCC-
Q 006607 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGS- 448 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gn- 448 (639)
.+-+.-+..-.+.|++.|++..- |. +++.++++|.|. ++.++. -|++++. +=|||=
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~ 123 (286)
T PRK14175 44 GASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFH 123 (286)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 34455566677788899987643 33 344447788874 333331 1232331 123443
Q ss_pred ---------------hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607 449 ---------------SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 449 ---------------sltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
.-|++.|++-+. -..++|+++|+.+ -+|+.+|..|.++|..|++ .++. .+|++.
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~--~VG~pla~lL~~~gatVtv~~s~t--~~l~~~- 198 (286)
T PRK14175 124 PINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSH--IVGQPVSKLLLQKNASVTILHSRS--KDMASY- 198 (286)
T ss_pred ccchHhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCc--hhHHHH-
Confidence 236666666554 3678999999996 7999999999999999999 2211 111111
Q ss_pred CcccccceeeeccccccceeEEE--EcCc--CChhhhhcCCCCceeecccccCCc---CCCCCcee
Q 006607 508 PVEAQHNLVLSTSYAAHKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 566 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~~~vwi--vg~~--~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y 566 (639)
+ ++++++| +|+- ++++. .++|++++|+. +++. ++--||-+
T Consensus 199 -----------~----~~ADIVIsAvg~p~~i~~~~---vk~gavVIDvG-i~~~~~gkl~GDvd~ 245 (286)
T PRK14175 199 -----------L----KDADVIVSAVGKPGLVTKDV---VKEGAVIIDVG-NTPDENGKLKGDVDY 245 (286)
T ss_pred -----------H----hhCCEEEECCCCCcccCHHH---cCCCcEEEEcC-CCcCCCCCeecCccH
Confidence 0 3556655 4544 77764 48999999999 7763 34456553
No 83
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.035 Score=55.76 Aligned_cols=41 Identities=17% Similarity=0.313 Sum_probs=36.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++
T Consensus 2 ~~vlItGas~--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATS--GIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence 4689999998 9999999999999999988 888888888765
No 84
>PRK05866 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.053 Score=56.80 Aligned_cols=43 Identities=23% Similarity=0.346 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 40 ~k~vlItGasg--gIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l 84 (293)
T PRK05866 40 GKRILLTGASS--GIGEAAAEQFARRGATVVAVARREDLLDAVADRI 84 (293)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 8888888887765
No 85
>PRK06500 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.06 Score=53.73 Aligned_cols=44 Identities=16% Similarity=0.190 Sum_probs=38.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++++
T Consensus 6 ~k~vlItGasg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK06500 6 GKTALITGGTS--GIGLETARQFLAEGARVAITGRDPASLEAARAELG 51 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC
Confidence 35799999998 9999999999999999988 77888888777754
No 86
>PRK07774 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.056 Score=54.04 Aligned_cols=43 Identities=21% Similarity=0.338 Sum_probs=36.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+++..+++++++
T Consensus 6 ~k~vlItGasg--~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 50 (250)
T PRK07774 6 DKVAIVTGAAG--GIGQAYAEALAREGASVVVADINAEGAERVAKQI 50 (250)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 7777777776654
No 87
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.91 E-value=0.055 Score=54.75 Aligned_cols=43 Identities=16% Similarity=0.249 Sum_probs=37.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 12 ~k~ilItGa~g--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i 56 (259)
T PRK08213 12 GKTALVTGGSR--GLGLQIAEALGEAGARVVLSARKAEELEEAAAHL 56 (259)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8888887776654
No 88
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=94.89 E-value=0.064 Score=54.52 Aligned_cols=43 Identities=19% Similarity=0.281 Sum_probs=38.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.++++++.
T Consensus 5 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~ 49 (262)
T TIGR03325 5 GEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH 49 (262)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc
Confidence 46899999998 9999999999999999998 8888888887653
No 89
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.89 E-value=0.06 Score=54.27 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=37.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++++
T Consensus 2 ~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 45 (248)
T PRK10538 2 IVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDELG 45 (248)
T ss_pred EEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 589999998 9999999999999999998 88888888877654
No 90
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.86 E-value=0.051 Score=54.05 Aligned_cols=43 Identities=26% Similarity=0.366 Sum_probs=36.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 6 ~~~ilItGasg--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (251)
T PRK12826 6 GRVALVTGAAR--GIGRAIAVRLAADGAEVIVVDICGDDAAATAELV 50 (251)
T ss_pred CCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35799999998 9999999999999999988 7777776666554
No 91
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.84 E-value=0.052 Score=54.43 Aligned_cols=42 Identities=19% Similarity=0.318 Sum_probs=36.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
++++++|++| -||+++++.|+++|.+|++ |+.++.+++.+++
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l 44 (254)
T TIGR02415 1 KVALVTGGAQ--GIGKGIAERLAKDGFAVAVADLNEETAKETAKEI 44 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4689999998 9999999999999999988 7777777666654
No 92
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.83 E-value=0.053 Score=54.72 Aligned_cols=38 Identities=24% Similarity=0.269 Sum_probs=35.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (639)
.|+|+|||| .||+++|+.|.++|.+|.. |+.++...+.
T Consensus 2 ~ilV~GatG--~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~ 41 (275)
T COG0702 2 KILVTGATG--FVGGAVVRELLARGHEVRAAVRNPEAAAALA 41 (275)
T ss_pred eEEEEeccc--chHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence 689999999 9999999999999999999 9999999887
No 93
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.82 E-value=0.11 Score=55.07 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=75.9
Q ss_pred chhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHh-----cCcCCC
Q 006607 389 PWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVN-----SLPKTT 463 (639)
Q Consensus 389 ~~~~~~in~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~-----~i~~~~ 463 (639)
|.-.....+.+.+++..|.+ .|++|. +| +|.++..+. +-..= |...+++ .++-..
T Consensus 100 Plp~~i~~~~~ld~I~~aKD-------Vdg~n~---~n-~G~l~~~~~---~~~p~------T~~gii~~L~~~~i~l~G 159 (283)
T PRK14192 100 PVPAQIDERACFDAISLAKD-------VDGVTC---LG-FGRMAMGEA---AYGSA------TPAGIMRLLKAYNIELAG 159 (283)
T ss_pred CCccccCHHHHHhccCHHHh-------cCCCCc---cc-cCccccCCC---cccCC------cHHHHHHHHHHcCCCCCC
Confidence 33333444456677754444 356676 55 565554332 21222 3344444 345567
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccccceeEEEEcC----cCChhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD----DLTGKE 539 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~----~~~~~~ 539 (639)
++|+++|+.| -+|+++|..|.++|..|++-+. +-++|++.+ ++++++|... .++++.
T Consensus 160 k~vvViG~gg--~vGkpia~~L~~~gatVtv~~~-~t~~L~~~~----------------~~aDIvI~AtG~~~~v~~~~ 220 (283)
T PRK14192 160 KHAVVVGRSA--ILGKPMAMMLLNANATVTICHS-RTQNLPELV----------------KQADIIVGAVGKPELIKKDW 220 (283)
T ss_pred CEEEEECCcH--HHHHHHHHHHHhCCCEEEEEeC-CchhHHHHh----------------ccCCEEEEccCCCCcCCHHH
Confidence 7999999997 8999999999999999998211 223333332 2455655222 455544
Q ss_pred hhcCCCCceeecccccCC
Q 006607 540 QARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 540 q~~a~~G~~f~~~~~~~~ 557 (639)
.++|++++|+. ..|
T Consensus 221 ---lk~gavViDvg-~n~ 234 (283)
T PRK14192 221 ---IKQGAVVVDAG-FHP 234 (283)
T ss_pred ---cCCCCEEEEEE-Eee
Confidence 49999999998 555
No 94
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.77 E-value=0.053 Score=55.18 Aligned_cols=44 Identities=14% Similarity=0.290 Sum_probs=36.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~ 508 (639)
.+.|+++|+++ -||+++|+.|+++|.+|.+ +++++.+++.+++.
T Consensus 8 ~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~ 54 (260)
T PRK08416 8 GKTLVISGGTR--GIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLE 54 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 46899999997 9999999999999999987 45677776665543
No 95
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.75 E-value=0.064 Score=54.62 Aligned_cols=48 Identities=15% Similarity=0.153 Sum_probs=40.2
Q ss_pred CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+...+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 6 ~~~~~k~~lItGa~~--~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~ 55 (265)
T PRK07097 6 FSLKGKIALITGASY--GIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYR 55 (265)
T ss_pred cCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence 344567899999998 9999999999999999988 78888877766643
No 96
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.73 E-value=0.057 Score=54.09 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=36.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| -||+++|+.|+++|.+|++ |++++.+.+.+++
T Consensus 2 ~~vlItGas~--giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 45 (243)
T PRK07102 2 KKILIIGATS--DIARACARRYAAAGARLYLAARDVERLERLADDL 45 (243)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence 4799999998 9999999999999999988 8887777665553
No 97
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.73 E-value=0.061 Score=53.13 Aligned_cols=42 Identities=24% Similarity=0.313 Sum_probs=36.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| .||+.+|+.|.++|.+|.+ |++++.+++.+++
T Consensus 6 ~~ilItGasg--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 49 (246)
T PRK05653 6 KTALVTGASR--GIGRAIALRLAADGAKVVIYDSNEEAAEALAAEL 49 (246)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Confidence 5799999998 9999999999999999888 8878777665553
No 98
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=94.72 E-value=0.15 Score=55.35 Aligned_cols=157 Identities=15% Similarity=0.123 Sum_probs=103.6
Q ss_pred HcCCcEEEeccccc-ccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhh
Q 006607 408 AKGVKVISLGLLNQ-GEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 477 (639)
Q Consensus 408 ~~G~kv~~LG~ln~-~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~ki 477 (639)
-.|+|+++ |-... ...|..-.++.+--.|+ +..+-+.||+.+|+ |++..-+ |++.+.+.++|+- ..
T Consensus 66 ~~gvK~v~-~~p~N~~~glp~v~g~~~L~d~~TG~plal~d~~~lTa~RTaAasavAa~~LA~~da~~laiIGaG---~q 141 (330)
T COG2423 66 VAGVKIVG-VHPDNPARGLPTVSGVIVLFDAETGEPLALLDATRLTALRTAAASAVAAKYLARKDASTLAIIGAG---AQ 141 (330)
T ss_pred eEEEEEec-CcCCccccCCCcceEEEEEEecCCCCEEEEecCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HH
Confidence 45667666 22222 13444444555555555 45589999999985 3444544 6689999999998 99
Q ss_pred HHHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE-----EcCcCChhhhhcCCCC
Q 006607 478 ANAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL-----VGDDLTGKEQARAPKG 546 (639)
Q Consensus 478 g~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi-----vg~~~~~~~q~~a~~G 546 (639)
|+.-+++++ +...++.+ |+++.-+++.+.+..........+.+.++ .+++|++ -.-.++.+.+ +||
T Consensus 142 A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pil~~~~l---~~G 218 (330)
T COG2423 142 ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWL---KPG 218 (330)
T ss_pred HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCeecHhhc---CCC
Confidence 999999999 55566666 99999998887766665544234556664 6777777 2233444444 799
Q ss_pred ceeecccc-------cCCc-CCCCCceeecCCc
Q 006607 547 TIFIPYTQ-------IPPR-KLRKDCFYHSTPA 571 (639)
Q Consensus 547 ~~f~~~~~-------~~~~-~~R~dc~y~~~~a 571 (639)
+|+.-+.. ++++ -.|-||.+-+.+.
T Consensus 219 ~hI~aiGad~p~k~Eld~e~l~ra~~vvvD~~~ 251 (330)
T COG2423 219 THINAIGADAPGKRELDPEVLARADRVVVDSLE 251 (330)
T ss_pred cEEEecCCCCcccccCCHHHHHhcCeEEEcCHH
Confidence 99998874 4444 3345566665554
No 99
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=94.70 E-value=0.061 Score=59.29 Aligned_cols=137 Identities=13% Similarity=0.097 Sum_probs=75.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhhCCcccccceeeecccc--c-cceeEEE--EcC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL--VGD 533 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~-~~~~vwi--vg~ 533 (639)
...+|.++|||| -+|+.+.+.|.++ +.+++. ++++.-+.+...-+.-.+..+..+.+++ + +++|+++ +|.
T Consensus 37 ~~~kVaIvGATG--~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~ 114 (381)
T PLN02968 37 EKKRIFVLGASG--YTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH 114 (381)
T ss_pred cccEEEEECCCC--hHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence 456999999999 9999999999955 888777 3322222222221111111111122233 2 5677766 455
Q ss_pred cCChhhhhcCCCCceeecccccCCc-CCCCCceeecC--CccccCCCCccccccccccC---------cc-hhhh-HHHH
Q 006607 534 DLTGKEQARAPKGTIFIPYTQIPPR-KLRKDCFYHST--PAMIIPPSLSNMHSCENWLG---------RR-VMSA-WRIA 599 (639)
Q Consensus 534 ~~~~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~~~--~a~~~P~~~~~~~~~e~~~p---------r~-~~~A-c~a~ 599 (639)
..+.+--..+.+|..+||.| .. .+++|..|.+- -....|+-.+. +-+++| ++ +.-+ |.+-
T Consensus 115 ~~s~~i~~~~~~g~~VIDlS---s~fRl~~~~~y~~~y~~p~~~pe~~~~---~~yglpE~~r~~i~~~~iIAnPgC~~t 188 (381)
T PLN02968 115 GTTQEIIKALPKDLKIVDLS---ADFRLRDIAEYEEWYGHPHRAPELQKE---AVYGLTELQREEIKSARLVANPGCYPT 188 (381)
T ss_pred HHHHHHHHHHhCCCEEEEcC---chhccCCcccchhccCCCCCCcccchh---hhcccchhCHHHhcCCCEEECCCCHHH
Confidence 44444444456788888887 22 34456665554 22234432221 224443 22 2233 9999
Q ss_pred HHHHHhc
Q 006607 600 GIIHALE 606 (639)
Q Consensus 600 ~~v~alE 606 (639)
+++++|-
T Consensus 189 ~~~laL~ 195 (381)
T PLN02968 189 GIQLPLV 195 (381)
T ss_pred HHHHHHH
Confidence 9998773
No 100
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.67 E-value=0.085 Score=56.38 Aligned_cols=48 Identities=15% Similarity=0.078 Sum_probs=37.6
Q ss_pred hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 457 ~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
++......+|+|+|++| -||+.+++.|.++|.+|.. |+.++.+.+.++
T Consensus 4 ~~~~~~~~~vLVtG~~G--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~ 53 (353)
T PLN02896 4 EGRESATGTYCVTGATG--YIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSK 53 (353)
T ss_pred cccccCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh
Confidence 34444567899999999 9999999999999999987 666655555444
No 101
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.66 E-value=0.074 Score=53.21 Aligned_cols=43 Identities=21% Similarity=0.337 Sum_probs=37.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++++++.
T Consensus 3 k~vlItGas~--giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (248)
T PRK08251 3 QKILITGASS--GLGAGMAREFAAKGRDLALCARRTDRLEELKAELL 47 (248)
T ss_pred CEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 88888888876644
No 102
>PRK07825 short chain dehydrogenase; Provisional
Probab=94.66 E-value=0.047 Score=55.73 Aligned_cols=44 Identities=18% Similarity=0.215 Sum_probs=38.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.++++|++| .||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 5 ~~~ilVtGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (273)
T PRK07825 5 GKVVAITGGAR--GIGLATARALAALGARVAIGDLDEALAKETAAELG 50 (273)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 35799999998 9999999999999999988 88888888877654
No 103
>PRK07063 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.041 Score=55.69 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=39.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++..
T Consensus 7 ~k~vlVtGas~--gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~ 53 (260)
T PRK07063 7 GKVALVTGAAQ--GIGAAIARAFAREGAAVALADLDAALAERAAAAIAR 53 (260)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46799999998 9999999999999999988 888888888877543
No 104
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=94.63 E-value=0.16 Score=56.75 Aligned_cols=138 Identities=14% Similarity=0.148 Sum_probs=87.7
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec-
Q 006607 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG- 532 (639)
Q Consensus 460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg- 532 (639)
....++|+|+|. | .||+.+|+.|...|.+|++ +++.+....... +. .+.++++ ..++++| .|
T Consensus 209 ~l~Gk~VlViG~-G--~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~---G~-----~v~~l~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 209 LIAGKVVVVAGY-G--DVGKGCAQRLRGLGARVIVTEVDPICALQAAMD---GF-----RVMTMEEAAELGDIFVTATGN 277 (425)
T ss_pred CCCCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc---CC-----EecCHHHHHhCCCEEEECCCC
Confidence 335678999997 5 9999999999999999999 455443322111 11 1223332 5667766 33
Q ss_pred -CcCChhhhhcCCCCceeecccccCCc--------------CCCCCceeecCCc---ccc--CCCCccccccccccCcch
Q 006607 533 -DDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---MII--PPSLSNMHSCENWLGRRV 592 (639)
Q Consensus 533 -~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~~~--P~~~~~~~~~e~~~pr~~ 592 (639)
+.++.+....+++|++++-+..++.+ +.|+.+.-...|. +.+ -+.+-|+- |..+.|..+
T Consensus 278 ~~vI~~~~~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl~-~~~ghp~~v 356 (425)
T PRK05476 278 KDVITAEHMEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNLG-AATGHPSEV 356 (425)
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCcccccC-CCCCCccee
Confidence 34777888899999999988876542 2233333111211 111 12355676 899999999
Q ss_pred hhhHHHHHHHHHhcCCC
Q 006607 593 MSAWRIAGIIHALEGWD 609 (639)
Q Consensus 593 ~~Ac~a~~~v~alEgw~ 609 (639)
|.-.+|.=.+-+++=|.
T Consensus 357 md~sfa~q~l~~~~l~~ 373 (425)
T PRK05476 357 MDMSFANQALAQIELFT 373 (425)
T ss_pred eCHHHHHHHHHHHHHHh
Confidence 98777666555555554
No 105
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.62 E-value=0.061 Score=56.47 Aligned_cols=38 Identities=21% Similarity=0.136 Sum_probs=32.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l 503 (639)
+.|+|+|++| -||+++++.|.++|.+|.. |+.++.+++
T Consensus 6 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 45 (322)
T PLN02986 6 KLVCVTGASG--YIASWIVKLLLLRGYTVKATVRDLTDRKKT 45 (322)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCCcchHHH
Confidence 6899999999 9999999999999999975 666554443
No 106
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.60 E-value=0.049 Score=58.54 Aligned_cols=53 Identities=19% Similarity=0.203 Sum_probs=44.8
Q ss_pred HHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 455 v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
+.+.++-..+.++++|+|+ -||+++|+.|+++|.+|.| ||.++-++.++++..
T Consensus 27 ~~~~~~~~~~~~vVTGans--GIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~ 81 (314)
T KOG1208|consen 27 VTHGIDLSGKVALVTGATS--GIGFETARELALRGAHVVLACRNEERGEEAKEQIQK 81 (314)
T ss_pred eeccccCCCcEEEEECCCC--chHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3444555557899999996 9999999999999999999 999999888888665
No 107
>PRK07677 short chain dehydrogenase; Provisional
Probab=94.58 E-value=0.07 Score=53.84 Aligned_cols=43 Identities=26% Similarity=0.392 Sum_probs=37.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 2 k~~lItG~s~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~ 46 (252)
T PRK07677 2 KVVIITGGSS--GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIE 46 (252)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 88888888776654
No 108
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.57 E-value=0.06 Score=53.94 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=32.6
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhh
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLR 506 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~--~~~~~l~~~ 506 (639)
|+|+|||| ++|+.++++|.+++.+|.. |+. ++.++|++.
T Consensus 1 I~V~GatG--~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~ 43 (233)
T PF05368_consen 1 ILVTGATG--NQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL 43 (233)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT
T ss_pred CEEECCcc--HHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc
Confidence 78999999 9999999999999999888 653 456666654
No 109
>PRK09072 short chain dehydrogenase; Provisional
Probab=94.56 E-value=0.081 Score=53.74 Aligned_cols=43 Identities=26% Similarity=0.394 Sum_probs=38.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|++ |++++.+++++++
T Consensus 5 ~~~vlItG~s~--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (263)
T PRK09072 5 DKRVLLTGASG--GIGQALAEALAAAGARLLLVGRNAEKLEALAARL 49 (263)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 8888888888775
No 110
>PRK05854 short chain dehydrogenase; Provisional
Probab=94.56 E-value=0.045 Score=57.90 Aligned_cols=44 Identities=16% Similarity=0.150 Sum_probs=38.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.++++|+++ -||+++|+.|+++|.+|.+ |+.++.++..+++.
T Consensus 14 gk~~lITGas~--GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~ 59 (313)
T PRK05854 14 GKRAVVTGASD--GLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIR 59 (313)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999997 9999999999999999998 88888887766653
No 111
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.53 E-value=0.082 Score=52.25 Aligned_cols=43 Identities=23% Similarity=0.291 Sum_probs=33.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~ 507 (639)
.+.|+++|++| .||+++|+.|+++|.+|.+ ++. ++.+++.+++
T Consensus 5 ~~~vlItG~sg--~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 50 (248)
T PRK05557 5 GKVALVTGASR--GIGRAIAERLAAQGANVVINYASSEAGAEALVAEI 50 (248)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 46899999998 9999999999999999966 433 3455554443
No 112
>PRK07024 short chain dehydrogenase; Provisional
Probab=94.53 E-value=0.06 Score=54.58 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=39.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.++++++++.
T Consensus 3 ~~vlItGas~--gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~ 48 (257)
T PRK07024 3 LKVFITGASS--GIGQALAREYARQGATLGLVARRTDALQAFAARLPK 48 (257)
T ss_pred CEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc
Confidence 5799999998 9999999999999999998 888888888777643
No 113
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.52 E-value=0.075 Score=55.03 Aligned_cols=44 Identities=11% Similarity=0.203 Sum_probs=37.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 6 ~k~vlVTGas~--gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~ 51 (275)
T PRK05876 6 GRGAVITGGAS--GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR 51 (275)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35799999997 9999999999999999998 88888887766653
No 114
>PRK12939 short chain dehydrogenase; Provisional
Probab=94.51 E-value=0.08 Score=52.75 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=37.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 7 ~~~vlItGa~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (250)
T PRK12939 7 GKRALVTGAAR--GLGAAFAEALAEAGATVAFNDGLAAEARELAAAL 51 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 47899999998 9999999999999999888 7778777776654
No 115
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.50 E-value=0.081 Score=55.83 Aligned_cols=44 Identities=18% Similarity=0.183 Sum_probs=38.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 6 ~k~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~ 51 (322)
T PRK07453 6 KGTVIITGASS--GVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELG 51 (322)
T ss_pred CCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence 46799999998 9999999999999999988 88888888877763
No 116
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=94.50 E-value=0.076 Score=53.14 Aligned_cols=42 Identities=19% Similarity=0.133 Sum_probs=35.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 3 k~ilItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 47 (248)
T PRK06947 3 KVVLITGASR--GIGRATAVLAAARGWSVGINYARDAAAAEETADAV 47 (248)
T ss_pred cEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 5799999998 9999999999999999876 5667776665554
No 117
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.48 E-value=0.07 Score=49.95 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=35.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cc--hhhHHHHHhhCC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--IC--KDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~--~~~~~~l~~~~~ 508 (639)
|.|+++|+++ -||+++|+.|+++ +.+|.+ |+ .++.+++.++++
T Consensus 1 k~~lItGa~~--giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~ 48 (167)
T PF00106_consen 1 KTVLITGASS--GIGRALARALARRGARVVILTSRSEDSEGAQELIQELK 48 (167)
T ss_dssp EEEEEETTTS--HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCC--HHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence 5789999997 9999999999988 556566 77 678888877655
No 118
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=94.46 E-value=0.044 Score=58.26 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=27.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+.|+|+||+| =||+++++.|.++|.+|..
T Consensus 1 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~ 29 (343)
T TIGR01472 1 KIALITGITG--QDGSYLAEFLLEKGYEVHG 29 (343)
T ss_pred CeEEEEcCCC--cHHHHHHHHHHHCCCEEEE
Confidence 4799999999 9999999999999999997
No 119
>PRK06172 short chain dehydrogenase; Provisional
Probab=94.42 E-value=0.08 Score=53.24 Aligned_cols=43 Identities=21% Similarity=0.170 Sum_probs=37.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 7 ~k~ilItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (253)
T PRK06172 7 GKVALVTGGAA--GIGRATALAFAREGAKVVVADRDAAGGEETVALI 51 (253)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8888877766654
No 120
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.42 E-value=0.084 Score=53.09 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=37.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 ~~~vlItGasg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (262)
T PRK13394 7 GKTAVVTGAAS--GIGKEIALELARAGAAVAIADLNQDGANAVADEI 51 (262)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8887777776664
No 121
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.41 E-value=0.1 Score=54.98 Aligned_cols=61 Identities=23% Similarity=0.185 Sum_probs=45.6
Q ss_pred eecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCC
Q 006607 444 VVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 444 vv~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~ 508 (639)
=|||-....+.--..++. .++|++.||-| .|||++.+|.+.|++ +.+ |+.++-++|.+++.
T Consensus 104 NTD~~Gf~~~L~~~~~~~-~~~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~ 167 (272)
T PRK12550 104 NTDYIAIAKLLASYQVPP-DLVVALRGSGG---MAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG 167 (272)
T ss_pred ecCHHHHHHHHHhcCCCC-CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC
Confidence 366766665553334433 35899999976 589999999998975 777 99999999987754
No 122
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.40 E-value=0.14 Score=48.96 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=51.2
Q ss_pred cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec
Q 006607 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG 532 (639)
Q Consensus 458 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg 532 (639)
+++-..++|.++|.+. .+|+.+|..|.++|..|++ .++. .++++ +.+||+| +|
T Consensus 23 ~~~~~gk~v~VvGrs~--~vG~pla~lL~~~gatV~~~~~~t--------------------~~l~~~v~~ADIVvsAtg 80 (140)
T cd05212 23 GVRLDGKKVLVVGRSG--IVGAPLQCLLQRDGATVYSCDWKT--------------------IQLQSKVHDADVVVVGSP 80 (140)
T ss_pred CCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeCCCC--------------------cCHHHHHhhCCEEEEecC
Confidence 4455788999999998 9999999999999999999 2111 01221 4566655 33
Q ss_pred --CcCChhhhhcCCCCceeeccc
Q 006607 533 --DDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 533 --~~~~~~~q~~a~~G~~f~~~~ 553 (639)
..++++. .++|++++|+.
T Consensus 81 ~~~~i~~~~---ikpGa~Vidvg 100 (140)
T cd05212 81 KPEKVPTEW---IKPGATVINCS 100 (140)
T ss_pred CCCccCHHH---cCCCCEEEEcC
Confidence 2355554 49999999887
No 123
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.39 E-value=0.086 Score=52.96 Aligned_cols=42 Identities=24% Similarity=0.237 Sum_probs=35.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 ~~ilItGasg--~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~ 51 (254)
T PRK12746 7 KVALVTGASR--GIGRAIAMRLANDGALVAIHYGRNKQAADETIREI 51 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 6899999998 9999999999999999965 6777776665554
No 124
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.38 E-value=0.096 Score=52.35 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=37.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.++++|++| .||+++|+.|.++|.+|.+ |+.++.+..++++.
T Consensus 5 ~k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (252)
T PRK06138 5 GRVAIVTGAGS--GIGRATAKLFAREGARVVVADRDAEAAERVAAAIA 50 (252)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh
Confidence 46899999998 9999999999999999988 88887777666643
No 125
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.37 E-value=0.052 Score=55.12 Aligned_cols=42 Identities=21% Similarity=0.286 Sum_probs=37.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++.
T Consensus 2 ~vlItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 45 (259)
T PRK08340 2 NVLVTASSR--GIGFNVARELLKKGARVVISSRNEENLEKALKELK 45 (259)
T ss_pred eEEEEcCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 689999998 9999999999999999998 88888888877754
No 126
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.37 E-value=0.093 Score=52.90 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=37.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 3 k~ilItGat~--~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (257)
T PRK07074 3 RTALVTGAAG--GIGQALARRFLAAGDRVLALDIDAAALAAFADALG 47 (257)
T ss_pred CEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999988 88888888777653
No 127
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.37 E-value=0.1 Score=52.25 Aligned_cols=142 Identities=15% Similarity=0.150 Sum_probs=89.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcCcCChh
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDDLTGK 538 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~~~~~ 538 (639)
+|.++||+| ++|+.++.-..+||.+|+- ||..+...+|.. .-.+..+...+++.+ ...+++| .|.+.+.+
T Consensus 2 KIaiIgAsG--~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~--~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASG--KAGSRILKEALKRGHEVTAIVRNASKLAARQGV--TILQKDIFDLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCc--hhHHHHHHHHHhCCCeeEEEEeChHhccccccc--eeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence 689999999 9999999999999999998 998887654222 111112112222221 3334444 44443222
Q ss_pred hh-----------------------------hcCCCCceeecccccCCc-------------CCC----CCceeecCCcc
Q 006607 539 EQ-----------------------------ARAPKGTIFIPYTQIPPR-------------KLR----KDCFYHSTPAM 572 (639)
Q Consensus 539 ~q-----------------------------~~a~~G~~f~~~~~~~~~-------------~~R----~dc~y~~~~a~ 572 (639)
|. .-+-+|+..+|.-+||.+ .+| -|-+|.+-+++
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~ 157 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAF 157 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHh
Confidence 22 123466777777777753 122 57889999999
Q ss_pred ccCCCCcc-cc------ccccccCcchhhhHHHHHHHHHhcCCCC
Q 006607 573 IIPPSLSN-MH------SCENWLGRRVMSAWRIAGIIHALEGWDL 610 (639)
Q Consensus 573 ~~P~~~~~-~~------~~e~~~pr~~~~Ac~a~~~v~alEgw~~ 610 (639)
-.|++=.| +. -.|-.=..|..+|=-|.+|+-++|.=.+
T Consensus 158 f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h 202 (211)
T COG2910 158 FEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQH 202 (211)
T ss_pred cCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccc
Confidence 99974111 00 0222234678888999999999997544
No 128
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.37 E-value=0.08 Score=53.44 Aligned_cols=42 Identities=17% Similarity=0.244 Sum_probs=36.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 3 k~ilItG~~~--~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 46 (259)
T PRK12384 3 QVAVVIGGGQ--TLGAFLCHGLAEEGYRVAVADINSEKAANVAQEI 46 (259)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 7777777776654
No 129
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.37 E-value=0.079 Score=54.24 Aligned_cols=44 Identities=23% Similarity=0.256 Sum_probs=38.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 10 ~k~vlVtGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 55 (278)
T PRK08277 10 GKVAVITGGGG--VLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK 55 (278)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 88888887777653
No 130
>PRK08589 short chain dehydrogenase; Validated
Probab=94.36 E-value=0.075 Score=54.62 Aligned_cols=43 Identities=23% Similarity=0.278 Sum_probs=36.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+ ++.+++.+++.
T Consensus 6 ~k~vlItGas~--gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~ 50 (272)
T PRK08589 6 NKVAVITGAST--GIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIK 50 (272)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHH
Confidence 46799999998 9999999999999999998 66 77777666653
No 131
>PRK05993 short chain dehydrogenase; Provisional
Probab=94.35 E-value=0.06 Score=55.45 Aligned_cols=42 Identities=19% Similarity=0.265 Sum_probs=37.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.+++++++++
T Consensus 4 ~k~vlItGasg--giG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~ 47 (277)
T PRK05993 4 KRSILITGCSS--GIGAYCARALQSDGWRVFATCRKEEDVAALEAE 47 (277)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC
Confidence 35799999998 9999999999999999998 888888888764
No 132
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.33 E-value=0.093 Score=53.12 Aligned_cols=44 Identities=14% Similarity=0.220 Sum_probs=35.8
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
...+.|+++|++| -||+++|+.|+++|.+|.+ |+ ++.+++++++
T Consensus 13 l~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~ 58 (258)
T PRK06935 13 LDGKVAIVTGGNT--GLGQGYAVALAKAGADIIITTHG-TNWDETRRLI 58 (258)
T ss_pred CCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH
Confidence 3457899999998 9999999999999999988 55 5556665553
No 133
>PRK07831 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.084 Score=53.57 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=37.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.++++|++| +-||+++|+.|+++|.+|.+ |+.+++++..+++.
T Consensus 17 ~k~vlItG~sg-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~ 63 (262)
T PRK07831 17 GKVVLVTAAAG-TGIGSATARRALEEGARVVISDIHERRLGETADELA 63 (262)
T ss_pred CCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999996 35999999999999999998 77777776665543
No 134
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.28 E-value=0.064 Score=53.72 Aligned_cols=41 Identities=27% Similarity=0.348 Sum_probs=36.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 2 ~vlItGas~--giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~ 44 (223)
T PRK05884 2 EVLVTGGDT--DLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL 44 (223)
T ss_pred eEEEEeCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 589999998 9999999999999999988 8888888887665
No 135
>PRK05872 short chain dehydrogenase; Provisional
Probab=94.27 E-value=0.076 Score=55.48 Aligned_cols=46 Identities=17% Similarity=0.244 Sum_probs=41.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.++++.
T Consensus 8 ~gk~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~ 55 (296)
T PRK05872 8 AGKVVVVTGAAR--GIGAELARRLHARGAKLALVDLEEAELAALAAELGG 55 (296)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC
Confidence 356899999998 9999999999999999988 899999999888754
No 136
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.24 E-value=0.084 Score=53.49 Aligned_cols=45 Identities=20% Similarity=0.265 Sum_probs=39.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++..
T Consensus 7 ~k~vlItG~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 53 (259)
T PRK06125 7 GKRVLITGASK--GIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA 53 (259)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence 47899999997 9999999999999999988 888888887776543
No 137
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.23 E-value=0.096 Score=52.26 Aligned_cols=43 Identities=21% Similarity=0.326 Sum_probs=36.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|.++|.+|.+ |+.++.+++++++
T Consensus 3 ~~~ilItGas~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 47 (250)
T TIGR03206 3 DKTAIVTGGGG--GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI 47 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999988 7777777776654
No 138
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.22 E-value=0.093 Score=53.61 Aligned_cols=41 Identities=17% Similarity=0.296 Sum_probs=35.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 2 ~vlVtGasg--gIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 44 (270)
T PRK05650 2 RVMITGAAS--GLGRAIALRWAREGWRLALADVNEEGGEETLKLL 44 (270)
T ss_pred EEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 689999998 9999999999999999988 8888877766554
No 139
>PRK07814 short chain dehydrogenase; Provisional
Probab=94.20 E-value=0.1 Score=53.10 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=38.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 9 ~~~~vlItGasg--gIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 54 (263)
T PRK07814 9 DDQVAVVTGAGR--GLGAAIALAFAEAGADVLIAARTESQLDEVAEQI 54 (263)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 8888887776664
No 140
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.18 E-value=0.088 Score=55.05 Aligned_cols=44 Identities=20% Similarity=0.201 Sum_probs=36.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.++..+++
T Consensus 15 ~~k~vlItGas~--gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l 60 (306)
T PRK06197 15 SGRVAVVTGANT--GLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI 60 (306)
T ss_pred CCCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 457899999998 9999999999999999877 8777766554443
No 141
>PRK08017 oxidoreductase; Provisional
Probab=94.15 E-value=0.072 Score=53.49 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=35.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++.+.+++
T Consensus 3 k~vlVtGasg--~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~ 44 (256)
T PRK08017 3 KSVLITGCSS--GIGLEAALELKRRGYRVLAACRKPDDVARMNS 44 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh
Confidence 5799999998 9999999999999999988 88888776654
No 142
>PRK05599 hypothetical protein; Provisional
Probab=94.14 E-value=0.088 Score=53.36 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=36.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.|+++|+++ -||+++|+.|++ |.+|.+ |++++++++++++.+
T Consensus 2 ~vlItGas~--GIG~aia~~l~~-g~~Vil~~r~~~~~~~~~~~l~~ 45 (246)
T PRK05599 2 SILILGGTS--DIAGEIATLLCH-GEDVVLAARRPEAAQGLASDLRQ 45 (246)
T ss_pred eEEEEeCcc--HHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHh
Confidence 589999997 999999999995 999999 899999988887643
No 143
>PRK07062 short chain dehydrogenase; Provisional
Probab=94.13 E-value=0.063 Score=54.50 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=39.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
..+.++++|++| .||+++|+.|+++|.+|.+ |+.++++++.+++..
T Consensus 7 ~~k~~lItGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 54 (265)
T PRK07062 7 EGRVAVVTGGSS--GIGLATVELLLEAGASVAICGRDEERLASAEARLRE 54 (265)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh
Confidence 356899999997 9999999999999999988 888888877766543
No 144
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.12 E-value=0.13 Score=54.49 Aligned_cols=168 Identities=17% Similarity=0.177 Sum_probs=90.9
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCC
Q 006607 383 IVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT 462 (639)
Q Consensus 383 ~~~y~~~~~~~~in~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~~ 462 (639)
|+-=.+|.-.++ -+++.+.=..|++.| +.|-. ++.+|. ..--| |||--...+.--..+...
T Consensus 63 G~nVTiP~K~~~-~~~~D~l~~~A~~iG-------AVNTv--~~~~g~-l~G~N--------TD~~Gf~~~l~~~~~~~~ 123 (288)
T PRK12749 63 GTGVSMPNKQLA-CEYVDELTPAAKLVG-------AINTI--VNDDGY-LRGYN--------TDGTGHIRAIKESGFDIK 123 (288)
T ss_pred EEEECcCCHHHH-HHHhccCCHHHHHhC-------ceeEE--EccCCE-EEEEe--------cCHHHHHHHHHhcCCCcC
Confidence 445556664433 333555555666655 44442 123443 12223 566665555543344444
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cch---hhHHHHHhhCCcccccceeeeccc------c-c-cceeE
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICK---DDYEKLKLRIPVEAQHNLVLSTSY------A-A-HKTKI 528 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~---~~~~~l~~~~~~~~~~~l~~~~~~------~-~-~~~~v 528 (639)
.++|+|.||-| . ||||+..|++.|+ ++++ |++ ++.++|.+++....... +.+.++ + + .++++
T Consensus 124 ~k~vlvlGaGG--a-arAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~-~~~~~~~~~~~l~~~~~~aDi 199 (288)
T PRK12749 124 GKTMVLLGAGG--A-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCV-VTVTDLADQQAFAEALASADI 199 (288)
T ss_pred CCEEEEECCcH--H-HHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCce-EEEechhhhhhhhhhcccCCE
Confidence 56899999987 3 8999999998887 5666 763 58888888765433221 112222 2 2 45677
Q ss_pred EE----EcCcC--C---hhhhhcCCCCceeecccccCCcC------CC-CCceeecCCcccc
Q 006607 529 WL----VGDDL--T---GKEQARAPKGTIFIPYTQIPPRK------LR-KDCFYHSTPAMII 574 (639)
Q Consensus 529 wi----vg~~~--~---~~~q~~a~~G~~f~~~~~~~~~~------~R-~dc~y~~~~a~~~ 574 (639)
+| +|-.= + +.+....+++..+.|+. -.|.+ .| +-|....+..|-+
T Consensus 200 vINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v-Y~P~~T~ll~~A~~~G~~~~~Gl~ML~ 260 (288)
T PRK12749 200 LTNGTKVGMKPLENESLVNDISLLHPGLLVTECV-YNPHMTKLLQQAQQAGCKTIDGYGMLL 260 (288)
T ss_pred EEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEec-CCCccCHHHHHHHHCCCeEECCHHHHH
Confidence 77 33210 0 01222346677777776 33331 12 4566666655543
No 145
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.12 E-value=0.062 Score=56.99 Aligned_cols=44 Identities=20% Similarity=0.301 Sum_probs=37.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+-|+++||++ =||.++|..|+++|.++.+ |+.+|++++++++
T Consensus 11 ~~kvVvITGASs--GIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l 56 (282)
T KOG1205|consen 11 AGKVVLITGASS--GIGEALAYELAKRGAKLVLVARRARRLERVAEEL 56 (282)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHH
Confidence 356789999995 9999999999999999777 8888888886663
No 146
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=94.11 E-value=0.14 Score=58.47 Aligned_cols=181 Identities=15% Similarity=0.154 Sum_probs=105.6
Q ss_pred HHHcCCcEEEecccc------------cccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccC
Q 006607 406 ADAKGVKVISLGLLN------------QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 473 (639)
Q Consensus 406 A~~~G~kv~~LG~ln------------~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~~~~~V~~~Gatg 473 (639)
..++|+.++++=.+. ++-++.|+..+..+-| .+.-++ +|.+-++. .+| .++|+|.|+-
T Consensus 104 l~~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~--~lgr~~-~g~~taag----~vp--~akVlViGaG- 173 (511)
T TIGR00561 104 LAAKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAH--EFGRFF-TGQITAAG----KVP--PAKVLVIGAG- 173 (511)
T ss_pred HHHcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHH--Hhhhhc-CCceecCC----CCC--CCEEEEECCC-
Confidence 356778888766443 3345555555444423 033333 45544332 344 4899999985
Q ss_pred chhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc------------ccceeeec-c--------ccc--cceeE
Q 006607 474 ANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA------------QHNLVLST-S--------YAA--HKTKI 528 (639)
Q Consensus 474 ~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~------------~~~l~~~~-~--------~~~--~~~~v 528 (639)
-+|.+.+..+...|.+|.+ ++.++++..++ ++.+. ..+-...+ . +.+ +++||
T Consensus 174 --~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DI 250 (511)
T TIGR00561 174 --VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDI 250 (511)
T ss_pred --HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCE
Confidence 8999999999999998887 77778776664 33322 01100111 1 111 55677
Q ss_pred EE--E---cC----cCChhhhhcCCCCceeecccccCCc----CCCCCceeecCCccccCCCCccccccccccCcc---h
Q 006607 529 WL--V---GD----DLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR---V 592 (639)
Q Consensus 529 wi--v---g~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~---~ 592 (639)
+| + |+ .+++++.+.+++|.+++|++ .++- -.|.|.+|.+. +.+. +.|--.+|.+ +
T Consensus 251 VI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA-~d~GGn~E~t~p~~~~~~~------~GV~--~~gv~nlPs~~p~~ 321 (511)
T TIGR00561 251 IITTALIPGKPAPKLITEEMVDSMKAGSVIVDLA-AEQGGNCEYTKPGEVYTTE------NQVK--VIGYTDLPSRLPTQ 321 (511)
T ss_pred EEECcccCCCCCCeeehHHHHhhCCCCCEEEEee-eCCCCCEEEecCceEEEec------CCEE--EEeeCCccccCHHH
Confidence 66 3 43 38999999999999999999 6654 22333333221 1122 3356667765 3
Q ss_pred hhhHHHHHHHHHhcCC
Q 006607 593 MSAWRIAGIIHALEGW 608 (639)
Q Consensus 593 ~~Ac~a~~~v~alEgw 608 (639)
.|--.+..++.-||.-
T Consensus 322 AS~l~s~nl~~~l~~l 337 (511)
T TIGR00561 322 SSQLYGTNLVNLLKLL 337 (511)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3335556665555553
No 147
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.10 E-value=0.12 Score=51.65 Aligned_cols=43 Identities=19% Similarity=0.339 Sum_probs=36.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 7 ~~~vlVtG~sg--~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~ 51 (239)
T PRK07666 7 GKNALITGAGR--GIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV 51 (239)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 36799999998 9999999999999999988 8877777766554
No 148
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.10 E-value=0.065 Score=57.11 Aligned_cols=78 Identities=14% Similarity=0.193 Sum_probs=48.8
Q ss_pred EEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeecccccccee-EEEEcCcCChhhhh
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTK-IWLVGDDLTGKEQA 541 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-vwivg~~~~~~~q~ 541 (639)
|+++||+| +||+.+|+.|++.+. ++.+ +++..+-.+++++....... ++ ..+ +-++||.-+.+...
T Consensus 1 VLVTGa~G--SIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~-----~v---~~~~~~vigDvrd~~~l~ 70 (293)
T PF02719_consen 1 VLVTGAGG--SIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDP-----KV---RFEIVPVIGDVRDKERLN 70 (293)
T ss_dssp EEEETTTS--HHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--T-----TC---EEEEE--CTSCCHHHHHH
T ss_pred CEEEcccc--HHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhccccc-----Cc---ccccCceeecccCHHHHH
Confidence 78999999 999999999998886 4555 88889999999975433221 01 112 34678877776654
Q ss_pred cC----CCCceeeccc
Q 006607 542 RA----PKGTIFIPYT 553 (639)
Q Consensus 542 ~a----~~G~~f~~~~ 553 (639)
.+ .+-.+||--+
T Consensus 71 ~~~~~~~pdiVfHaAA 86 (293)
T PF02719_consen 71 RIFEEYKPDIVFHAAA 86 (293)
T ss_dssp HHTT--T-SEEEE---
T ss_pred HHHhhcCCCEEEEChh
Confidence 44 5555555444
No 149
>PRK09135 pteridine reductase; Provisional
Probab=94.09 E-value=0.1 Score=51.82 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=34.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+.+|+.|+++|.+|.+ | ++++.+.+++++
T Consensus 6 ~~~vlItGa~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK09135 6 AKVALITGGAR--RIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL 51 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 4 345566665543
No 150
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.05 E-value=0.12 Score=53.20 Aligned_cols=44 Identities=25% Similarity=0.288 Sum_probs=36.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 9 ~~~~vlVtGa~g--~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~ 54 (274)
T PRK07775 9 DRRPALVAGASS--GIGAATAIELAAAGFPVALGARRVEKCEELVDKI 54 (274)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 346899999998 9999999999999999877 7777777665553
No 151
>PRK12829 short chain dehydrogenase; Provisional
Probab=94.04 E-value=0.079 Score=53.35 Aligned_cols=45 Identities=20% Similarity=0.420 Sum_probs=38.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| .||+++|+.|+++|.+|.+ |++++.++++++.+
T Consensus 10 ~~~~vlItGa~g--~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~ 56 (264)
T PRK12829 10 DGLRVLVTGGAS--GIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP 56 (264)
T ss_pred CCCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 347899999998 9999999999999999988 88888887776644
No 152
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.97 E-value=0.077 Score=56.37 Aligned_cols=148 Identities=22% Similarity=0.254 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeec-CCCCcce----------eeecCCh-
Q 006607 394 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS- 449 (639)
Q Consensus 394 ~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gns- 449 (639)
+-+.-+...++.|++.|++.. -|. +++..++||.|- ++.++. -|++++. +=|||=+
T Consensus 45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~ 124 (284)
T PRK14179 45 ASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHP 124 (284)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCH
Confidence 444556666778888888764 344 233336778775 333331 1222331 1234432
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006607 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (639)
Q Consensus 450 ---------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (639)
-|++.|++=+ +-.-++|.++|.+| -+|+.+|..|.++|..|++ .++.+
T Consensus 125 ~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~--ivG~Pla~lL~~~gatVtv~~s~t~--------- 193 (284)
T PRK14179 125 MNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSN--IVGKPMAQLLLDKNATVTLTHSRTR--------- 193 (284)
T ss_pred hhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cCcHHHHHHHHHCCCEEEEECCCCC---------
Confidence 4677776644 44678999999998 9999999999999999999 21111
Q ss_pred cccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCceee
Q 006607 509 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYH 567 (639)
Q Consensus 509 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~ 567 (639)
++++ ++++|+| +| +.++++. .++|+++||++ +.+. ++.-|+-+.
T Consensus 194 -----------~l~~~~~~ADIVI~avg~~~~v~~~~---ik~GavVIDvg-in~~~~gkl~GDVdf~ 246 (284)
T PRK14179 194 -----------NLAEVARKADILVVAIGRGHFVTKEF---VKEGAVVIDVG-MNRDENGKLIGDVDFD 246 (284)
T ss_pred -----------CHHHHHhhCCEEEEecCccccCCHHH---ccCCcEEEEec-ceecCCCCeecCccHH
Confidence 1222 4566655 33 3355443 69999999999 6652 444665533
No 153
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=93.97 E-value=0.14 Score=50.91 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=36.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|..|.+ |+.++.+++.+++
T Consensus 6 ~~~vlItGa~g--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (245)
T PRK12936 6 GRKALVTGASG--GIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL 50 (245)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 46899999998 9999999999999999887 7777777776554
No 154
>PRK06484 short chain dehydrogenase; Validated
Probab=93.96 E-value=0.12 Score=58.06 Aligned_cols=46 Identities=17% Similarity=0.184 Sum_probs=40.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
..+.++++|++| -||+++|+.|+++|.+|.+ |+++++++++++++.
T Consensus 268 ~~k~~lItGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 315 (520)
T PRK06484 268 SPRVVAITGGAR--GIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGD 315 (520)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 456899999998 9999999999999999998 888999988877643
No 155
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=93.94 E-value=0.14 Score=54.97 Aligned_cols=117 Identities=15% Similarity=0.071 Sum_probs=74.7
Q ss_pred ceeeecCCCCcc--eee-ecCChhHH-------HHHHhc-CcCCCcEEEEecccCchhhHHHHHHHHh-ccCc-EEEe--
Q 006607 430 EIYLERQPNKLK--IKV-VDGSSLAA-------AVVVNS-LPKTTAHVLLRGTVTANKVANAVASSLC-QMGI-KVAT-- 494 (639)
Q Consensus 430 ~~~~~k~p~~L~--irv-v~Gnslta-------a~v~~~-i~~~~~~V~~~Gatg~~kig~ava~~L~-~~~~-~v~~-- 494 (639)
++.+.-+|+ -. ..+ .||+.+|+ ++.... -+++.++|.++|+- ..|++.+++|+ .+++ +|.+
T Consensus 86 g~i~l~d~~-tG~~~ai~~d~~~lT~~RTaa~~~laa~~la~~~~~~v~iiGaG---~qA~~~~~al~~~~~i~~v~V~~ 161 (326)
T TIGR02992 86 GMMVLLSSR-TGLLQALLLDNGYLTDVRTAAAGAVAARHLAREDSSVVAIFGAG---MQARLQLEALTLVRDIRSARIWA 161 (326)
T ss_pred EEEEEEECC-CCCceEEEcCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCC---HHHHHHHHHHHHhCCccEEEEEC
Confidence 344444544 22 344 37777764 122222 25677899999996 79999999998 4664 4666
Q ss_pred cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcC-----cCChhhhhcCCCCceeeccc
Q 006607 495 ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-----DLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 495 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-----~~~~~~q~~a~~G~~f~~~~ 553 (639)
|+.++.+++.+++..+.+.......++++ ++++|++.-. .++++. .++|+++..+.
T Consensus 162 R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p~i~~~~---l~~g~~i~~vg 224 (326)
T TIGR02992 162 RDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETPILHAEW---LEPGQHVTAMG 224 (326)
T ss_pred CCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCcEecHHH---cCCCcEEEeeC
Confidence 99999999988875443333222334554 7788877322 234444 48999988775
No 156
>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1. UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].
Probab=93.94 E-value=0.15 Score=50.63 Aligned_cols=54 Identities=17% Similarity=0.338 Sum_probs=39.0
Q ss_pred HHHHhhccCCceecccc--chhccCCcccccCChhhHHHhhcC-CCCCcCCCcchhhhhcCC
Q 006607 215 DFMNNMGHCNFEFIPMW--LFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGT 273 (639)
Q Consensus 215 ~~~~~~~HsGye~~P~~--~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~lWDrLFGT 273 (639)
....-+.|.... .|.+ +-+..+ ++.+|++|..||.. +++|||...++|+.+...
T Consensus 99 nq~HkWsH~~~~-~P~~V~~LQ~~g----illsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~ 155 (178)
T PF10520_consen 99 NQFHKWSHTYKS-LPPWVRFLQDAG----ILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDK 155 (178)
T ss_pred HHHHHHHcCCCC-CCHHHHHHHHCC----cccCchhhhccccCcccCCeEeecccchHHHHH
Confidence 334567788655 4654 112223 35699999999999 899999999999988664
No 157
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=93.93 E-value=0.12 Score=57.56 Aligned_cols=151 Identities=19% Similarity=0.199 Sum_probs=91.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-----
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----- 531 (639)
..++|+++|+ | .+|+.++++|.+.| .+|++ |+.++.+++.++++... +...++.+ ..++++|.
T Consensus 179 ~~~~VlViGa-G--~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~----i~~~~l~~~l~~aDvVi~aT~s~ 251 (417)
T TIGR01035 179 KGKKALLIGA-G--EMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA----VKFEDLEEYLAEADIVISSTGAP 251 (417)
T ss_pred cCCEEEEECC-h--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE----eeHHHHHHHHhhCCEEEECCCCC
Confidence 4578999998 6 99999999999999 56777 88888888888765421 11223332 56777762
Q ss_pred cCcCChhhhhcCC----CCceeecccccCCc---CC--CCCceeecCCccccCCCCccccccccccCcchhhhHHHHHHH
Q 006607 532 GDDLTGKEQARAP----KGTIFIPYTQIPPR---KL--RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGII 602 (639)
Q Consensus 532 g~~~~~~~q~~a~----~G~~f~~~~~~~~~---~~--R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v 602 (639)
.-.+++++.+.+. .+.+++|.+ +|+. +. -+++.+. .-++++.+ ++-.+..|.-.+=.|+.||
T Consensus 252 ~~ii~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~------~vDdl~~~--~~~n~~~r~~~~~~a~~ii 322 (417)
T TIGR01035 252 HPIVSKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLY------DVDDLQPV--VEENLAERREEAEKAEEIV 322 (417)
T ss_pred CceEcHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEE------EHHHHHHH--HHHhHHHHHHHHHHHHHHH
Confidence 1235666665442 356888998 5554 11 1222211 11122211 3334555666667888887
Q ss_pred H----HhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006607 603 H----ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 628 (639)
Q Consensus 603 ~----alEgw~~~-e~G~-i--v-~~i~~iw~aa~ 628 (639)
- +++.|... ..-. | + ++++++-+.-+
T Consensus 323 ~~~~~~f~~w~~~~~~~p~I~~lr~~~~~i~~~el 357 (417)
T TIGR01035 323 EEETAEFKQWLRSLEVEPTIKALRSLAEIVREKEL 357 (417)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 6 77777765 5665 4 3 66666654443
No 158
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=93.93 E-value=0.16 Score=53.65 Aligned_cols=125 Identities=13% Similarity=0.049 Sum_probs=77.0
Q ss_pred ecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeec
Q 006607 445 VDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST 519 (639)
Q Consensus 445 v~Gnsltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~ 519 (639)
|||.-...+.--..+ +...++|+|+||- -.|||++.+|.+.|+ ++++ |+.+|.++|.++...... ...+.
T Consensus 105 TD~~G~~~~l~~~~~~~~~~~k~vlvlGaG---Gaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~--~~~~~ 179 (282)
T TIGR01809 105 TDWDGIAGALANIGKFEPLAGFRGLVIGAG---GTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGV--ITRLE 179 (282)
T ss_pred CCHHHHHHHHHhhCCccccCCceEEEEcCc---HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCc--ceecc
Confidence 667666666543332 2245789999996 579999999999997 5777 999999999887643211 11111
Q ss_pred ---ccc-c-cceeEEE----EcCcCChhhhhc---------CCCCceeecccccCCc-----CCC-CCceeecCCcccc
Q 006607 520 ---SYA-A-HKTKIWL----VGDDLTGKEQAR---------APKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 574 (639)
Q Consensus 520 ---~~~-~-~~~~vwi----vg~~~~~~~q~~---------a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~ 574 (639)
.++ . .+++++| +|..++++++.. .+++..+.|..=-|.+ ..| +-|....+..|-+
T Consensus 180 ~~~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv 258 (282)
T TIGR01809 180 GDSGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWPTPLVAIVSAAGWRVISGLQMLL 258 (282)
T ss_pred chhhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCCCHHHHHHHHCCCEEECcHHHHH
Confidence 122 2 4567777 676666655421 2456677777732222 112 4466666666654
No 159
>PLN02253 xanthoxin dehydrogenase
Probab=93.87 E-value=0.12 Score=53.01 Aligned_cols=45 Identities=16% Similarity=0.163 Sum_probs=38.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.+..+++.+++..
T Consensus 18 ~k~~lItGas~--gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~ 64 (280)
T PLN02253 18 GKVALVTGGAT--GIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG 64 (280)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC
Confidence 46899999998 9999999999999999988 677777777776643
No 160
>PRK06182 short chain dehydrogenase; Validated
Probab=93.86 E-value=0.094 Score=53.66 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=35.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+.++++++.+
T Consensus 3 ~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~l~~~~~ 45 (273)
T PRK06182 3 KKVALVTGASS--GIGKATARRLAAQGYTVYGAARRVDKMEDLAS 45 (273)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 36799999998 9999999999999999998 88888776654
No 161
>PRK06057 short chain dehydrogenase; Provisional
Probab=93.85 E-value=0.095 Score=52.97 Aligned_cols=44 Identities=16% Similarity=0.122 Sum_probs=38.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++.
T Consensus 7 ~~~vlItGasg--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 52 (255)
T PRK06057 7 GRVAVITGGGS--GIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG 52 (255)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Confidence 36899999998 9999999999999999988 88888887777654
No 162
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.79 E-value=0.16 Score=50.77 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=36.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~ 508 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ +++++.+++.++++
T Consensus 5 ~k~ilItGas~--gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~ 51 (253)
T PRK08642 5 EQTVLVTGGSR--GLGAAIARAFAREGARVVVNYHQSEDAAEALADELG 51 (253)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 36799999998 9999999999999999976 45666676666543
No 163
>PRK06181 short chain dehydrogenase; Provisional
Probab=93.79 E-value=0.13 Score=52.00 Aligned_cols=42 Identities=17% Similarity=0.287 Sum_probs=35.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+++|++| .||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 2 ~~vlVtGasg--~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l 45 (263)
T PRK06181 2 KVVIITGASE--GIGRALAVRLARAGAQLVLAARNETRLASLAQEL 45 (263)
T ss_pred CEEEEecCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4689999998 9999999999999999998 7777777665554
No 164
>PRK07576 short chain dehydrogenase; Provisional
Probab=93.78 E-value=0.14 Score=52.39 Aligned_cols=44 Identities=14% Similarity=0.288 Sum_probs=37.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 8 ~~k~ilItGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 53 (264)
T PRK07576 8 AGKNVVVVGGTS--GINLGIAQAFARAGANVAVASRSQEKVDAAVAQL 53 (264)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 7887777665554
No 165
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.77 E-value=0.13 Score=50.87 Aligned_cols=41 Identities=22% Similarity=0.266 Sum_probs=33.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (639)
++|+++|++| .||+++|+.|+++|.+|++ ++.++.+.+.++
T Consensus 7 ~~vlItGasg--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (249)
T PRK12825 7 RVALVTGAAR--GLGRAIALRLARAGADVVVHYRSDEEAAEELVEA 50 (249)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 5899999998 9999999999999999877 445555555544
No 166
>PLN02583 cinnamoyl-CoA reductase
Probab=93.75 E-value=0.17 Score=52.99 Aligned_cols=31 Identities=16% Similarity=0.111 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..+.|+|+|++| -||+++++.|.++|.+|..
T Consensus 5 ~~k~vlVTGatG--~IG~~lv~~Ll~~G~~V~~ 35 (297)
T PLN02583 5 SSKSVCVMDASG--YVGFWLVKRLLSRGYTVHA 35 (297)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 356899999999 9999999999999999987
No 167
>PRK07806 short chain dehydrogenase; Provisional
Probab=93.71 E-value=0.13 Score=51.50 Aligned_cols=43 Identities=21% Similarity=0.224 Sum_probs=34.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|.++|.+|.+ |+. ++.+++.+++
T Consensus 6 ~k~vlItGasg--giG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l 51 (248)
T PRK07806 6 GKTALVTGSSR--GIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI 51 (248)
T ss_pred CcEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHH
Confidence 36799999998 9999999999999999977 654 3555555443
No 168
>PRK08862 short chain dehydrogenase; Provisional
Probab=93.67 E-value=0.099 Score=52.78 Aligned_cols=43 Identities=5% Similarity=0.156 Sum_probs=38.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|+++ -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 5 ~k~~lVtGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i 49 (227)
T PRK08862 5 SSIILITSAGS--VLGRTISCHFARLGATLILCDQDQSALKDTYEQC 49 (227)
T ss_pred CeEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 46899999997 9999999999999999999 8899888877664
No 169
>PRK12742 oxidoreductase; Provisional
Probab=93.65 E-value=0.11 Score=51.55 Aligned_cols=44 Identities=23% Similarity=0.240 Sum_probs=36.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ +++++.+++.++.+
T Consensus 6 ~k~vlItGasg--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~ 52 (237)
T PRK12742 6 GKKVLVLGGSR--GIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG 52 (237)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC
Confidence 46899999998 9999999999999999876 46677777766543
No 170
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=93.63 E-value=0.18 Score=48.33 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=45.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC-c------ccccceeeec-cccc--cceeEEEE
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-V------EAQHNLVLST-SYAA--HKTKIWLV 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-~------~~~~~l~~~~-~~~~--~~~~vwiv 531 (639)
+|.++|+. ..|.|+|..|+++|.+|+| |+++..+.|++.-. . ....+ +.++ ++++ ++++++|+
T Consensus 1 KI~ViGaG---~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~-i~~t~dl~~a~~~ad~Iii 75 (157)
T PF01210_consen 1 KIAVIGAG---NWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPEN-IKATTDLEEALEDADIIII 75 (157)
T ss_dssp EEEEESSS---HHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETT-EEEESSHHHHHTT-SEEEE
T ss_pred CEEEECcC---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcc-cccccCHHHHhCcccEEEe
Confidence 58899998 8999999999999999999 88899999987622 1 11123 3344 4663 77777664
No 171
>PLN00198 anthocyanidin reductase; Provisional
Probab=93.63 E-value=0.14 Score=54.29 Aligned_cols=42 Identities=21% Similarity=0.184 Sum_probs=34.2
Q ss_pred CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
.|...++|+++|++| -||+.+|+.|.++|.+|.. |+.++...
T Consensus 5 ~~~~~~~vlItG~~G--fIG~~l~~~L~~~g~~V~~~~r~~~~~~~ 48 (338)
T PLN00198 5 TPTGKKTACVIGGTG--FLASLLIKLLLQKGYAVNTTVRDPENQKK 48 (338)
T ss_pred cCCCCCeEEEECCch--HHHHHHHHHHHHCCCEEEEEECCCCCHHH
Confidence 366678899999999 9999999999999999854 66554443
No 172
>PRK12828 short chain dehydrogenase; Provisional
Probab=93.63 E-value=0.1 Score=51.37 Aligned_cols=42 Identities=19% Similarity=0.119 Sum_probs=34.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
.+.|+++|++| .||+++|+.|+++|.+|.+ |++++.++..++
T Consensus 7 ~k~vlItGatg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~ 50 (239)
T PRK12828 7 GKVVAITGGFG--GLGRATAAWLAARGARVALIGRGAAPLSQTLPG 50 (239)
T ss_pred CCEEEEECCCC--cHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH
Confidence 46799999998 9999999999999999888 766655444333
No 173
>PRK08628 short chain dehydrogenase; Provisional
Probab=93.63 E-value=0.14 Score=51.65 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=34.5
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
...+.++++||+| -||+++|+.|+++|.+|.+ |++++. ++.++
T Consensus 5 l~~~~ilItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~ 49 (258)
T PRK08628 5 LKDKVVIVTGGAS--GIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEE 49 (258)
T ss_pred cCCCEEEEeCCCC--hHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHH
Confidence 3456899999998 9999999999999999988 666655 44343
No 174
>PRK08703 short chain dehydrogenase; Provisional
Probab=93.62 E-value=0.093 Score=52.41 Aligned_cols=43 Identities=21% Similarity=0.270 Sum_probs=38.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 6 ~k~vlItG~sg--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (239)
T PRK08703 6 DKTILVTGASQ--GLGEQVAKAYAAAGATVILVARHQKKLEKVYDAI 50 (239)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH
Confidence 36899999998 9999999999999999998 8888888877664
No 175
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=93.58 E-value=0.22 Score=54.53 Aligned_cols=140 Identities=14% Similarity=0.179 Sum_probs=90.3
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEEe--ccc-------ccccccccCC---ceeeec-CCCCcce----------------
Q 006607 392 REAINSLIEEAILEADAKGVKVISL--GLL-------NQGEELNRNG---EIYLER-QPNKLKI---------------- 442 (639)
Q Consensus 392 ~~~in~~I~~Ai~~A~~~G~kv~~L--G~l-------n~~e~ln~~g---~~~~~k-~p~~L~i---------------- 442 (639)
..+-+.-+...++.|++.|++..-. -.- +.+++||.|- ++.++. -|++++.
T Consensus 114 dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl 193 (364)
T PLN02616 114 RKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGF 193 (364)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 3445555777788999999986543 222 2236778874 333331 1333431
Q ss_pred ------eeecC--C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHH
Q 006607 443 ------KVVDG--S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLK 504 (639)
Q Consensus 443 ------rvv~G--n----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~ 504 (639)
|+..| + .-|++.|++-+ +-.-++|+|+|... -||+-+|..|-++|-.|++ .++-
T Consensus 194 ~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~--iVGkPLa~LL~~~~ATVTicHs~T------ 265 (364)
T PLN02616 194 HPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSRT------ 265 (364)
T ss_pred ChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCeEEEeCCCC------
Confidence 33333 2 45677777655 33688999999997 9999999999999999999 2111
Q ss_pred hhCCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607 505 LRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 505 ~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ +++||+| +| +-++++.. ++|+++||+- +.+
T Consensus 266 --------~------nl~~~~r~ADIVIsAvGkp~~i~~d~v---K~GAvVIDVG-In~ 306 (364)
T PLN02616 266 --------K------NPEEITREADIIISAVGQPNMVRGSWI---KPGAVVIDVG-INP 306 (364)
T ss_pred --------C------CHHHHHhhCCEEEEcCCCcCcCCHHHc---CCCCEEEecc-ccc
Confidence 0 1222 3566766 33 34677666 9999999997 554
No 176
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.54 E-value=0.18 Score=53.36 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=38.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|+++ -||+++|+.|+++| .+|.+ |++++.+++++++.
T Consensus 3 ~k~vlITGas~--GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~ 49 (314)
T TIGR01289 3 KPTVIITGASS--GLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG 49 (314)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence 45789999997 99999999999999 99988 88888888877764
No 177
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=93.53 E-value=0.11 Score=56.37 Aligned_cols=91 Identities=18% Similarity=0.141 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEec-ccccccccccCCceeeecCCCCcceeeecCChhHHHHHH---hcCc-CCCcEEEEe
Q 006607 395 INSLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVV---NSLP-KTTAHVLLR 469 (639)
Q Consensus 395 in~~I~~Ai~~A~~~G~kv~~LG-~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~---~~i~-~~~~~V~~~ 469 (639)
|=-+|.+|...|.+.|.-=--|. +|++ .+.+.|.-. -+.++-+|..=.++++. +..+ -+.++|+|+
T Consensus 110 IlGQVK~Ay~~A~~~g~~g~~L~~lf~~--------A~~~aKrVR-teT~I~~~~vSv~s~av~~~~~~~~l~~k~vLvI 180 (338)
T PRK00676 110 IQGQVKRAYLKAARERKLPFALHFLFQK--------ALKEGKVFR-SKGGAPYAEVTIESVVQQELRRRQKSKKASLLFI 180 (338)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHhCCccCCEEEEE
Confidence 33448889999998885311111 1111 223333322 22444444322222233 3332 257899999
Q ss_pred cccCchhhHHHHHHHHhccCcE-EEe--cch
Q 006607 470 GTVTANKVANAVASSLCQMGIK-VAT--ICK 497 (639)
Q Consensus 470 Gatg~~kig~ava~~L~~~~~~-v~~--~~~ 497 (639)
|| | ++|+-+|++|.++|++ +++ |+.
T Consensus 181 Ga-G--em~~l~a~~L~~~g~~~i~v~nRt~ 208 (338)
T PRK00676 181 GY-S--EINRKVAYYLQRQGYSRITFCSRQQ 208 (338)
T ss_pred cc-c--HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 99 5 9999999999999854 666 544
No 178
>PRK05875 short chain dehydrogenase; Provisional
Probab=93.51 E-value=0.13 Score=52.56 Aligned_cols=44 Identities=20% Similarity=0.222 Sum_probs=37.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+++++
T Consensus 6 ~~k~vlItGasg--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (276)
T PRK05875 6 QDRTYLVTGGGS--GIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI 51 (276)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 357899999998 9999999999999999998 7777777666654
No 179
>PRK08263 short chain dehydrogenase; Provisional
Probab=93.43 E-value=0.12 Score=52.90 Aligned_cols=43 Identities=12% Similarity=0.079 Sum_probs=37.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.++++++.+
T Consensus 4 k~vlItGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~ 48 (275)
T PRK08263 4 KVWFITGASR--GFGRAWTEAALERGDRVVATARDTATLADLAEKYG 48 (275)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc
Confidence 5799999998 9999999999999999988 88888888776653
No 180
>PRK08303 short chain dehydrogenase; Provisional
Probab=93.43 E-value=0.14 Score=54.31 Aligned_cols=43 Identities=16% Similarity=0.175 Sum_probs=35.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc----------hhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------KDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~----------~~~~~~l~~~~ 507 (639)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+ +++.+++++++
T Consensus 8 ~k~~lITGgs~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l 62 (305)
T PRK08303 8 GKVALVAGATR--GAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELV 62 (305)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHH
Confidence 46899999997 8999999999999999988 65 35666665554
No 181
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=93.43 E-value=0.17 Score=53.75 Aligned_cols=42 Identities=14% Similarity=0.107 Sum_probs=33.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~~--~~~~~~~~l~~~~ 507 (639)
+.|+|+|++| -||+++|+.|+++| .+|.+ |+..+.+++++++
T Consensus 5 k~vLVTGatG--~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~ 50 (324)
T TIGR03589 5 KSILITGGTG--SFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF 50 (324)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh
Confidence 5799999999 99999999999886 67776 5555555565554
No 182
>PRK08177 short chain dehydrogenase; Provisional
Probab=93.38 E-value=0.11 Score=51.67 Aligned_cols=40 Identities=15% Similarity=0.183 Sum_probs=34.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++++
T Consensus 2 k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 43 (225)
T PRK08177 2 RTALIIGASR--GLGLGLVDRLLERGWQVTATVRGPQQDTALQA 43 (225)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh
Confidence 5799999998 9999999999999999998 77777666643
No 183
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=93.28 E-value=0.16 Score=50.73 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 4 ~~k~vlItGas~--gIG~~ia~~l~~~G~~vi~ 34 (248)
T TIGR01832 4 EGKVALVTGANT--GLGQGIAVGLAEAGADIVG 34 (248)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 347899999998 9999999999999999998
No 184
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=93.25 E-value=0.13 Score=53.57 Aligned_cols=34 Identities=24% Similarity=0.204 Sum_probs=29.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
++|+|+|++| -||+.+++.|.++|.+|.. |+.++
T Consensus 5 ~~ilVtGatG--fIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 5 KVVCVTGASG--YIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CEEEEECChH--HHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 6899999999 9999999999999999876 66554
No 185
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.24 E-value=0.11 Score=52.13 Aligned_cols=45 Identities=16% Similarity=0.200 Sum_probs=38.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 11 ~~k~vlItG~~g--~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~ 57 (247)
T PRK08945 11 KDRIILVTGAGD--GIGREAALTYARHGATVILLGRTEEKLEAVYDEIE 57 (247)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 77777777766643
No 186
>PLN02494 adenosylhomocysteinase
Probab=93.21 E-value=0.72 Score=52.35 Aligned_cols=157 Identities=15% Similarity=0.133 Sum_probs=98.7
Q ss_pred ceeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccccee
Q 006607 441 KIKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV 516 (639)
Q Consensus 441 ~irvv~Gnsltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~ 516 (639)
+-|.=||.|. .-.+++... ...++|.|+|.- +||+.+|+.+...|.+|+. ++..+...-... ..+
T Consensus 231 Dn~yGtgqS~-~d~i~r~t~i~LaGKtVvViGyG---~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~-G~~------ 299 (477)
T PLN02494 231 DNLYGCRHSL-PDGLMRATDVMIAGKVAVICGYG---DVGKGCAAAMKAAGARVIVTEIDPICALQALME-GYQ------ 299 (477)
T ss_pred hccccccccH-HHHHHHhcCCccCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhc-CCe------
Confidence 3566667775 333444433 256789999987 9999999999999999998 444443221111 111
Q ss_pred eeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---------------CCCCCceeecCC----c
Q 006607 517 LSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---------------KLRKDCFYHSTP----A 571 (639)
Q Consensus 517 ~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---------------~~R~dc~y~~~~----a 571 (639)
+.++++ +.+++++ .| ..+..+....+++|++++-++++.+. +.|..+..-+.+ .
T Consensus 300 -vv~leEal~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~ 378 (477)
T PLN02494 300 -VLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSG 378 (477)
T ss_pred -eccHHHHHhhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCE
Confidence 112332 4566666 33 23578899999999999999985322 222222222221 1
Q ss_pred cc--cCCCCccccccccccCcchhhhHHHHHHHHHhcCCCC
Q 006607 572 MI--IPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL 610 (639)
Q Consensus 572 ~~--~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~ 610 (639)
+. --+.+-|+. |-.+.|..+|.-.++--.+-..|-|..
T Consensus 379 i~ll~eGrlvNl~-~~~GhP~evmd~sFa~Q~la~~~l~~~ 418 (477)
T PLN02494 379 IIVLAEGRLMNLG-CATGHPSFVMSCSFTNQVIAQLELWNE 418 (477)
T ss_pred EEEEeCCcccccc-CCCCCCcceeeHHHHHHHHHHHHHHhc
Confidence 22 222467787 899999999999888766666666654
No 187
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.19 E-value=0.21 Score=50.56 Aligned_cols=44 Identities=27% Similarity=0.437 Sum_probs=35.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ ++.++.+++.+++
T Consensus 8 ~~k~vlItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 54 (258)
T PRK09134 8 APRAALVTGAAR--RIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEI 54 (258)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 346899999998 9999999999999999976 3456666665553
No 188
>PRK07035 short chain dehydrogenase; Provisional
Probab=93.16 E-value=0.14 Score=51.48 Aligned_cols=44 Identities=23% Similarity=0.228 Sum_probs=38.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++.
T Consensus 8 ~k~vlItGas~--gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~ 53 (252)
T PRK07035 8 GKIALVTGASR--GIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIV 53 (252)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 88888887777653
No 189
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.15 E-value=0.14 Score=50.79 Aligned_cols=43 Identities=19% Similarity=0.219 Sum_probs=37.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| .||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 5 ~~~vlItGa~g--~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (238)
T PRK05786 5 GKKVAIIGVSE--GLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL 49 (238)
T ss_pred CcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35899999998 9999999999999999998 8888887775554
No 190
>PLN02427 UDP-apiose/xylose synthase
Probab=93.14 E-value=0.2 Score=54.34 Aligned_cols=43 Identities=16% Similarity=0.210 Sum_probs=33.8
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHH
Q 006607 460 PKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~ 504 (639)
|-+..+|+|+|+|| =||+.+++.|.++ |.+|.. |+.++.+.+.
T Consensus 11 ~~~~~~VlVTGgtG--fIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~ 56 (386)
T PLN02427 11 PIKPLTICMIGAGG--FIGSHLCEKLMTETPHKVLALDVYNDKIKHLL 56 (386)
T ss_pred cccCcEEEEECCcc--hHHHHHHHHHHhcCCCEEEEEecCchhhhhhh
Confidence 44566899999999 9999999999987 588886 5555555443
No 191
>PRK07832 short chain dehydrogenase; Provisional
Probab=93.13 E-value=0.14 Score=52.49 Aligned_cols=42 Identities=14% Similarity=0.172 Sum_probs=36.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.++++|++| -||+++|+.|+++|.+|.+ |+.+..+++.+++
T Consensus 1 k~vlItGas~--giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~ 44 (272)
T PRK07832 1 KRCFVTGAAS--GIGRATALRLAAQGAELFLTDRDADGLAQTVADA 44 (272)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 3689999998 9999999999999999888 7788777776654
No 192
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.13 E-value=0.29 Score=51.84 Aligned_cols=63 Identities=22% Similarity=0.168 Sum_probs=46.2
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcc
Q 006607 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE 510 (639)
Q Consensus 445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~ 510 (639)
|||.-...+.--+..+...++|++.||-| .|||++-+|++.|. ++.+ |+.+|-++|.+++...
T Consensus 109 TD~~Gf~~~L~~~~~~~~~k~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~ 174 (283)
T PRK14027 109 TDVSGFGRGMEEGLPNAKLDSVVQVGAGG---VGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA 174 (283)
T ss_pred CCHHHHHHHHHhcCcCcCCCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence 66666666553222233457899999986 58999999999987 4556 9999999998876543
No 193
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=93.12 E-value=0.092 Score=56.33 Aligned_cols=68 Identities=19% Similarity=0.315 Sum_probs=46.3
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCccc---ccceeeeccccc-cceeEEEE
Q 006607 461 KTTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHNLVLSTSYAA-HKTKIWLV 531 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~---~~~l~~~~~~~~-~~~~vwiv 531 (639)
|...+|.++|| | .||+++|..|+.+|+ ++.| +++++.+-...++.... ...-+...++++ ++++|+|+
T Consensus 4 ~~~~ki~iiGa-G--~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIi 79 (315)
T PRK00066 4 KQHNKVVLVGD-G--AVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVI 79 (315)
T ss_pred CCCCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEE
Confidence 33459999999 8 999999999998888 5666 66777665555433221 111123334777 89988776
No 194
>PRK06953 short chain dehydrogenase; Provisional
Probab=93.10 E-value=0.13 Score=50.84 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=35.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++++
T Consensus 2 ~~vlvtG~sg--~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~ 43 (222)
T PRK06953 2 KTVLIVGASR--GIGREFVRQYRADGWRVIATARDAAALAALQA 43 (222)
T ss_pred ceEEEEcCCC--chhHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence 4689999998 9999999999999999988 77777777764
No 195
>PRK06914 short chain dehydrogenase; Provisional
Probab=93.10 E-value=0.14 Score=52.29 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=36.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.++++|++| -||+++|+.|.++|.+|.+ |+.++.+++++++
T Consensus 4 k~~lItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 47 (280)
T PRK06914 4 KIAIVTGASS--GFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA 47 (280)
T ss_pred CEEEEECCCc--hHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence 5689999998 9999999999999999988 8888887776653
No 196
>PRK12827 short chain dehydrogenase; Provisional
Probab=93.10 E-value=0.2 Score=49.74 Aligned_cols=43 Identities=21% Similarity=0.291 Sum_probs=34.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe------cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT------ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~------~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..+++.+++
T Consensus 6 ~~~ilItGasg--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 54 (249)
T PRK12827 6 SRRVLITGGSG--GLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGI 54 (249)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHH
Confidence 36799999998 9999999999999999877 3455566555553
No 197
>PRK05693 short chain dehydrogenase; Provisional
Probab=93.09 E-value=0.14 Score=52.42 Aligned_cols=41 Identities=24% Similarity=0.306 Sum_probs=35.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.++++
T Consensus 2 k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 44 (274)
T PRK05693 2 PVVLITGCSS--GIGRALADAFKAAGYEVWATARKAEDVEALAAA 44 (274)
T ss_pred CEEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC
Confidence 4789999998 9999999999999999988 888887777543
No 198
>PRK07985 oxidoreductase; Provisional
Probab=93.06 E-value=0.18 Score=52.85 Aligned_cols=42 Identities=21% Similarity=0.296 Sum_probs=33.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~--~~~~~~l~~~ 506 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ ++ +++.+++++.
T Consensus 49 ~k~vlITGas~--gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~ 94 (294)
T PRK07985 49 DRKALVTGGDS--GIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKI 94 (294)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHH
Confidence 36899999998 9999999999999999988 32 3455555544
No 199
>PLN02650 dihydroflavonol-4-reductase
Probab=93.06 E-value=0.18 Score=53.79 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=34.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
+.++|+|+|++| -||+++++.|.++|.+|.. |+.++.+.++.
T Consensus 4 ~~k~iLVTGatG--fIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~ 47 (351)
T PLN02650 4 QKETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPANVKKVKH 47 (351)
T ss_pred CCCEEEEeCCcH--HHHHHHHHHHHHCCCEEEEEEcCcchhHHHHH
Confidence 356899999999 9999999999999999986 66666555443
No 200
>PRK12937 short chain dehydrogenase; Provisional
Probab=93.00 E-value=0.23 Score=49.40 Aligned_cols=43 Identities=21% Similarity=0.297 Sum_probs=33.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.++++ + ++++.+++.+++
T Consensus 5 ~~~vlItG~~~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 50 (245)
T PRK12937 5 NKVAIVTGASR--GIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI 50 (245)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999877 3 344455554443
No 201
>PRK08278 short chain dehydrogenase; Provisional
Probab=92.98 E-value=0.17 Score=52.17 Aligned_cols=34 Identities=12% Similarity=0.221 Sum_probs=29.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.+
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 6 GKTLFITGASR--GIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecccc
Confidence 36799999998 9999999999999999988 5543
No 202
>PRK12743 oxidoreductase; Provisional
Probab=92.93 E-value=0.2 Score=50.66 Aligned_cols=42 Identities=12% Similarity=0.179 Sum_probs=35.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ +++++.+++.+++
T Consensus 3 k~vlItGas~--giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~ 47 (256)
T PRK12743 3 QVAIVTASDS--GIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV 47 (256)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence 5799999997 9999999999999999977 4666676666654
No 203
>PRK07060 short chain dehydrogenase; Provisional
Probab=92.93 E-value=0.19 Score=49.99 Aligned_cols=44 Identities=23% Similarity=0.316 Sum_probs=38.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.++.
T Consensus 8 ~~~~~lItGa~g--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 53 (245)
T PRK07060 8 SGKSVLVTGASS--GIGRACAVALAQRGARVVAAARNAAALDRLAGET 53 (245)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 456899999998 9999999999999999988 8888888777654
No 204
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=92.91 E-value=0.063 Score=55.26 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=62.4
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEEEcCcCChhhhhc
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR 542 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~ 542 (639)
.|+|+|+|| -||+++++.|.++|.+|.. |+.+....+. . -..|+.++..+.+....
T Consensus 2 ~ILVtG~tG--fiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~------------~~~~~~~d~~~~~~~~~ 59 (314)
T COG0451 2 RILVTGGAG--FIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------S------------GVEFVVLDLTDRDLVDE 59 (314)
T ss_pred eEEEEcCcc--cHHHHHHHHHHhCCCeEEEEeCCCccccccc--------c------------ccceeeecccchHHHHH
Confidence 389999999 9999999999999999998 3333222111 0 01355555555533322
Q ss_pred CCCCceeecccccCCcCCCCCceeecCCccccCCCCcc----ccccccccCcchhhhHHHHHH
Q 006607 543 APKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSN----MHSCENWLGRRVMSAWRIAGI 601 (639)
Q Consensus 543 a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~----~~~~e~~~pr~~~~Ac~a~~~ 601 (639)
+..+ .+ |+.++-......+....+ +..-|....+++..||.++++
T Consensus 60 ~~~~-------------~~-d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~ 108 (314)
T COG0451 60 LAKG-------------VP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV 108 (314)
T ss_pred HHhc-------------CC-CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2222 11 777777766665555332 444666677777777777443
No 205
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.87 E-value=0.22 Score=51.06 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=27.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~ 37 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGAELAF 37 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 35799999853247999999999999999988
No 206
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=92.87 E-value=0.45 Score=53.02 Aligned_cols=157 Identities=13% Similarity=0.099 Sum_probs=94.7
Q ss_pred ceeeecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccccee
Q 006607 441 KIKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV 516 (639)
Q Consensus 441 ~irvv~Gnsltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~ 516 (639)
+-|.=+|.|.. -.+.+.. ....++|.|+|.- .||+.+|+.|...|.+|++ +++.|....... +.
T Consensus 172 Dn~yg~g~s~~-~~i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~---G~----- 239 (406)
T TIGR00936 172 DNRYGTGQSTI-DGILRATNLLIAGKTVVVAGYG---WCGKGIAMRARGMGARVIVTEVDPIRALEAAMD---GF----- 239 (406)
T ss_pred hcccccchhHH-HHHHHhcCCCCCcCEEEEECCC---HHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhc---CC-----
Confidence 35566777744 3344433 3456799999976 9999999999999999988 455543322211 11
Q ss_pred eeccccc--cceeEEEE----cCcCChhhhhcCCCCceeecccccCCc--------------CCCCCce---eecCCcc-
Q 006607 517 LSTSYAA--HKTKIWLV----GDDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCF---YHSTPAM- 572 (639)
Q Consensus 517 ~~~~~~~--~~~~vwiv----g~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~---y~~~~a~- 572 (639)
.+.+.++ +.++++|. -+.++.+....+++|++++-+.+++.+ +.|.-.. .+++-.+
T Consensus 240 ~v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~ 319 (406)
T TIGR00936 240 RVMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIY 319 (406)
T ss_pred EeCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEE
Confidence 1223332 56677662 233556677889999999998886541 2332111 1111111
Q ss_pred cc-CCCCccccccccccCcchhhhHHHHHHHHHhcCCCC
Q 006607 573 II-PPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL 610 (639)
Q Consensus 573 ~~-P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~ 610 (639)
.+ -+.+-|+- |..+.|..+|.-.+|-=.+-+++=|.+
T Consensus 320 ll~~GrlvNl~-~~~ghp~~vmd~sfa~q~la~~~l~~~ 357 (406)
T TIGR00936 320 LLAEGRLVNLA-AAEGHPSEVMDMSFANQALAAEYLWKN 357 (406)
T ss_pred EEeCCceeccc-CCCCCcceeeCHHHHHHHHHHHHHHhc
Confidence 11 12355676 888999999977666555555555554
No 207
>PRK09242 tropinone reductase; Provisional
Probab=92.86 E-value=0.14 Score=51.64 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=38.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 9 ~k~~lItGa~~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l 53 (257)
T PRK09242 9 GQTALITGASK--GIGLAIAREFLGLGADVLIVARDADALAQARDEL 53 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8888888777664
No 208
>PLN02686 cinnamoyl-CoA reductase
Probab=92.85 E-value=0.22 Score=54.01 Aligned_cols=42 Identities=26% Similarity=0.321 Sum_probs=35.0
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (639)
...+.|+|+|++| -||+++++.|.++|.+|.+ |+.++.++++
T Consensus 51 ~~~k~VLVTGatG--fIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 51 AEARLVCVTGGVS--FLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 3567899999999 9999999999999999975 7666665553
No 209
>PRK06123 short chain dehydrogenase; Provisional
Probab=92.83 E-value=0.21 Score=49.86 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=33.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
+.++++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++
T Consensus 3 ~~~lVtG~~~--~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l 47 (248)
T PRK06123 3 KVMIITGASR--GIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI 47 (248)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHH
Confidence 4789999998 9999999999999988877 4555565555543
No 210
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.82 E-value=0.21 Score=53.05 Aligned_cols=148 Identities=22% Similarity=0.262 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC-
Q 006607 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS- 448 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn- 448 (639)
.+-+.-+....+.|++.|++..- |. +++..+++|.|- ++.+..= |++++. +=|||=
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~ 123 (284)
T PRK14190 44 PASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFH 123 (284)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 34555566778889999998754 44 334447788885 3333321 233431 123332
Q ss_pred ---------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607 449 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 449 ---------------sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
.-|+.+|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++. .
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~atVt~chs~t--~------ 193 (284)
T PRK14190 124 PINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSN--IVGKPVGQLLLNENATVTYCHSKT--K------ 193 (284)
T ss_pred HhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEEeCCc--h------
Confidence 24666666543 44688999999998 9999999999999999998 2111 1
Q ss_pred Ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCcee
Q 006607 508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 566 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y 566 (639)
++++ +.++|+| +| +.++++.. ++|+++||+. +++. ++--|+-+
T Consensus 194 ------------~l~~~~~~ADIvI~AvG~p~~i~~~~i---k~gavVIDvG-i~~~~~gkl~GDvd~ 245 (284)
T PRK14190 194 ------------NLAELTKQADILIVAVGKPKLITADMV---KEGAVVIDVG-VNRLENGKLCGDVDF 245 (284)
T ss_pred ------------hHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-ccccCCCCeeccCcH
Confidence 1221 3556655 33 35777777 9999999998 6652 44456553
No 211
>PRK08291 ectoine utilization protein EutC; Validated
Probab=92.81 E-value=0.29 Score=52.67 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=65.3
Q ss_pred ecCChhHHH-----HHH--hcC-cCCCcEEEEecccCchhhHHHHHHHHhc-cC-cEEEe--cchhhHHHHHhhCCcccc
Q 006607 445 VDGSSLAAA-----VVV--NSL-PKTTAHVLLRGTVTANKVANAVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQ 512 (639)
Q Consensus 445 v~Gnsltaa-----~v~--~~i-~~~~~~V~~~Gatg~~kig~ava~~L~~-~~-~~v~~--~~~~~~~~l~~~~~~~~~ 512 (639)
.+|+.+|+. ..+ ... +++.++|.++|+- ..|++.+.+|+. ++ .+|.+ |++++.+++.+++.++.+
T Consensus 106 ~d~~~lt~~rT~a~~~~a~~~la~~~~~~v~IiGaG---~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g 182 (330)
T PRK08291 106 LDNGYLTDVRTAAAGAVAARHLAREDASRAAVIGAG---EQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELG 182 (330)
T ss_pred cCCchHHHHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccC
Confidence 378777641 221 112 5567899999997 679999999983 55 45666 999999999988654433
Q ss_pred cceeeeccccc--cceeEEEE----cCc-CChhhhhcCCCCceeeccc
Q 006607 513 HNLVLSTSYAA--HKTKIWLV----GDD-LTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 513 ~~l~~~~~~~~--~~~~vwiv----g~~-~~~~~q~~a~~G~~f~~~~ 553 (639)
.......++++ +++++++. .+. ++.+ +.++|+++..+.
T Consensus 183 ~~v~~~~d~~~al~~aDiVi~aT~s~~p~i~~~---~l~~g~~v~~vg 227 (330)
T PRK08291 183 IPVTVARDVHEAVAGADIIVTTTPSEEPILKAE---WLHPGLHVTAMG 227 (330)
T ss_pred ceEEEeCCHHHHHccCCEEEEeeCCCCcEecHH---HcCCCceEEeeC
Confidence 33122334553 77777662 222 2332 347888877653
No 212
>PRK06128 oxidoreductase; Provisional
Probab=92.78 E-value=0.19 Score=52.54 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=28.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 55 ~k~vlITGas~--gIG~~~a~~l~~~G~~V~i 84 (300)
T PRK06128 55 GRKALITGADS--GIGRATAIAFAREGADIAL 84 (300)
T ss_pred CCEEEEecCCC--cHHHHHHHHHHHcCCEEEE
Confidence 46899999998 9999999999999999988
No 213
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.77 E-value=0.26 Score=52.84 Aligned_cols=161 Identities=24% Similarity=0.307 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeec-CCCCcce----------eeecCCh
Q 006607 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gns 449 (639)
++-+.-+..-++.|++.|++.. -|. +++..+++|.|- ++.++. -|++++. +=|||=+
T Consensus 45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~ 124 (301)
T PRK14194 45 PASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFH 124 (301)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccC
Confidence 3455556677778899998764 443 334446688775 333331 1222331 1244433
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEec-chhhHHHHHhhC
Q 006607 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI-CKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~-~~~~~~~l~~~~ 507 (639)
-|++.|++=+ +-.-++|.++|..| -+|+.+|..|.++|..|++- ++.+
T Consensus 125 ~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~--ivG~PmA~~L~~~gatVtv~~~~t~-------- 194 (301)
T PRK14194 125 SENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSN--IVGKPMAALLLQAHCSVTVVHSRST-------- 194 (301)
T ss_pred hhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEECCCCC--------
Confidence 3666666544 34688999999998 99999999999999999992 1111
Q ss_pred Ccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCCc------CCCCCceeec-----CC
Q 006607 508 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR------KLRKDCFYHS-----TP 570 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~------~~R~dc~y~~-----~~ 570 (639)
++++ +.++|+| +|+ .++++ ++++|+++||++ +++. ++.-|+-+.+ ..
T Consensus 195 ------------~l~e~~~~ADIVIsavg~~~~v~~~---~ik~GaiVIDvg-in~~~~~g~~kl~GDvdf~~~~~~a~~ 258 (301)
T PRK14194 195 ------------DAKALCRQADIVVAAVGRPRLIDAD---WLKPGAVVIDVG-INRIDDDGRSRLVGDVDFDSALPVVSA 258 (301)
T ss_pred ------------CHHHHHhcCCEEEEecCChhcccHh---hccCCcEEEEec-ccccCCCCCcceecccchHHHHhhcce
Confidence 1221 3455544 444 34433 469999999999 5542 3346665432 11
Q ss_pred ccccCCCCc
Q 006607 571 AMIIPPSLS 579 (639)
Q Consensus 571 a~~~P~~~~ 579 (639)
...||+.+-
T Consensus 259 iTPVPGGVG 267 (301)
T PRK14194 259 ITPVPGGVG 267 (301)
T ss_pred ecCCCCchh
Confidence 234676544
No 214
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=92.76 E-value=0.19 Score=50.96 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..+.|+++|+++ -||+++|+.|+++|.+|.+
T Consensus 7 ~~k~~lItGas~--gIG~aia~~l~~~G~~vv~ 37 (251)
T PRK12481 7 NGKVAIITGCNT--GLGQGMAIGLAKAGADIVG 37 (251)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 347899999997 9999999999999999998
No 215
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=92.75 E-value=0.24 Score=49.28 Aligned_cols=41 Identities=24% Similarity=0.169 Sum_probs=33.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (639)
+.|+++|++| -||+++++.|+++|.+|.+ |++++.+++.++
T Consensus 2 ~~~lItGa~g--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 45 (247)
T PRK09730 2 AIALVTGGSR--GIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNL 45 (247)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH
Confidence 4689999998 9999999999999999865 666666655554
No 216
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.62 E-value=0.39 Score=51.00 Aligned_cols=141 Identities=18% Similarity=0.254 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006607 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 442 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 442 (639)
.+-+.-+...++.|++.|++..- |- ++...++||.|- ++.++.= |++++.
T Consensus 38 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~ 117 (279)
T PRK14178 38 PASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFH 117 (279)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCC
Confidence 34455566778889999998744 42 344447788875 3344321 333431
Q ss_pred -----eeecCC----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607 443 -----KVVDGS----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 443 -----rvv~Gn----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
|+..|+ .-|++.|++=+ +-.-++|.++|... -+|+.+|..|.++|-.|++ .++. ..|++.+
T Consensus 118 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~--~vGrpla~lL~~~~atVtv~hs~t--~~L~~~~ 193 (279)
T PRK14178 118 PLNLGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSI--DVGRPMAALLLNADATVTICHSKT--ENLKAEL 193 (279)
T ss_pred hhhHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--cccHHHHHHHHhCCCeeEEEecCh--hHHHHHH
Confidence 122232 34666666544 33679999999997 9999999999999999998 2211 1111110
Q ss_pred CcccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607 508 PVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
++++++| +| +.++++.. ++|++++|++ ++.
T Consensus 194 ----------------~~ADIvI~Avgk~~lv~~~~v---k~GavVIDVg-i~~ 227 (279)
T PRK14178 194 ----------------RQADILVSAAGKAGFITPDMV---KPGATVIDVG-INQ 227 (279)
T ss_pred ----------------hhCCEEEECCCcccccCHHHc---CCCcEEEEee-ccc
Confidence 3566666 44 44666665 9999999999 665
No 217
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=92.61 E-value=0.22 Score=48.73 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=58.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------ 531 (639)
..++|.++|.. .||+++|+.|..-|.+|.. ++.+.-+...+ .. +...++++ +.++++++
T Consensus 35 ~g~tvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~-------~~~~~l~ell~~aDiv~~~~plt~ 103 (178)
T PF02826_consen 35 RGKTVGIIGYG---RIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FG-------VEYVSLDELLAQADIVSLHLPLTP 103 (178)
T ss_dssp TTSEEEEESTS---HHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TT-------EEESSHHHHHHH-SEEEE-SSSST
T ss_pred CCCEEEEEEEc---CCcCeEeeeeecCCceeEEecccCChhhhccc-cc-------ceeeehhhhcchhhhhhhhhcccc
Confidence 46789999986 9999999999999999999 33332221111 11 12234544 55666551
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCCc
Q 006607 532 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR 558 (639)
Q Consensus 532 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~ 558 (639)
-..|+.++..++|+|++|+-++| |+.+
T Consensus 104 ~T~~li~~~~l~~mk~ga~lvN~aRG~~vde~ 135 (178)
T PF02826_consen 104 ETRGLINAEFLAKMKPGAVLVNVARGELVDED 135 (178)
T ss_dssp TTTTSBSHHHHHTSTTTEEEEESSSGGGB-HH
T ss_pred ccceeeeeeeeeccccceEEEeccchhhhhhh
Confidence 35688899999999999999998 5554
No 218
>PRK07904 short chain dehydrogenase; Provisional
Probab=92.59 E-value=0.15 Score=52.07 Aligned_cols=44 Identities=14% Similarity=0.227 Sum_probs=36.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhh-HHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDD-YEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~-~~~l~~~~~ 508 (639)
.+.|+++|++| -||+++|+.|+++| .+|.+ |+.++ ++++.+++.
T Consensus 8 ~~~vlItGas~--giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~ 55 (253)
T PRK07904 8 PQTILLLGGTS--EIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMK 55 (253)
T ss_pred CcEEEEEcCCc--HHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHH
Confidence 34799999998 99999999999885 89888 77775 777766643
No 219
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=92.59 E-value=0.16 Score=51.55 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=33.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l 503 (639)
.++|+++||+| .||+++++.|.++|.+|+. |+.++.+++
T Consensus 17 ~~~ilItGasG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~ 57 (251)
T PLN00141 17 TKTVFVAGATG--RTGKRIVEQLLAKGFAVKAGVRDVDKAKTS 57 (251)
T ss_pred CCeEEEECCCc--HHHHHHHHHHHhCCCEEEEEecCHHHHHHh
Confidence 56899999999 9999999999999999876 777776544
No 220
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=92.58 E-value=0.19 Score=45.99 Aligned_cols=98 Identities=11% Similarity=0.104 Sum_probs=54.3
Q ss_pred EEEEecccCchhhHHHHHHHHh-ccCcEEEe--cchh-hHHHHHhhCCcccccceeeecc--ccc-cceeEEE--EcCcC
Q 006607 465 HVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKD-DYEKLKLRIPVEAQHNLVLSTS--YAA-HKTKIWL--VGDDL 535 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~-~~~~~v~~--~~~~-~~~~l~~~~~~~~~~~l~~~~~--~~~-~~~~vwi--vg~~~ 535 (639)
+|.++|||| -+|+.+++.|. .....+.. .+++ .-+.+....+.-.+..-+.+.+ .++ .++++++ .++..
T Consensus 1 rV~IvGAtG--~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~ 78 (121)
T PF01118_consen 1 RVAIVGATG--YVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA 78 (121)
T ss_dssp EEEEESTTS--HHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH
T ss_pred CEEEECCCC--HHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH
Confidence 589999999 99999999999 55666555 2333 2233333322111111122222 223 7778876 33332
Q ss_pred Chh-hhhcCCCCceeecccccCCc-CCCCCceee
Q 006607 536 TGK-EQARAPKGTIFIPYTQIPPR-KLRKDCFYH 567 (639)
Q Consensus 536 ~~~-~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~ 567 (639)
+.+ ..+-+++|..++|.| .. ++.+||.|.
T Consensus 79 ~~~~~~~~~~~g~~ViD~s---~~~R~~~~~~~~ 109 (121)
T PF01118_consen 79 SKELAPKLLKAGIKVIDLS---GDFRLDDDVPYG 109 (121)
T ss_dssp HHHHHHHHHHTTSEEEESS---STTTTSTTSEEE
T ss_pred HHHHHHHHhhCCcEEEeCC---HHHhCCCCCCEE
Confidence 222 222248999888887 22 344566664
No 221
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=92.58 E-value=0.21 Score=49.20 Aligned_cols=39 Identities=18% Similarity=0.333 Sum_probs=31.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+|.|+|+ | .+|+.||..+++.|.+|++ ++++.+++.+++
T Consensus 1 ~V~ViGa-G--~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~ 41 (180)
T PF02737_consen 1 KVAVIGA-G--TMGRGIAALFARAGYEVTLYDRSPEALERARKR 41 (180)
T ss_dssp EEEEES--S--HHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred CEEEEcC-C--HHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence 5899999 4 9999999999999999999 777766655444
No 222
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.57 E-value=0.25 Score=49.53 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=27.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 k~vlItG~sg--~iG~~la~~L~~~g~~vi~ 31 (256)
T PRK12745 3 PVALVTGGRR--GIGLGIARALAAAGFDLAI 31 (256)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 5799999998 9999999999999999988
No 223
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.53 E-value=0.43 Score=52.73 Aligned_cols=85 Identities=18% Similarity=0.210 Sum_probs=57.6
Q ss_pred HHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHH----------HHHHhcCcCCCcEEEEecccCchh
Q 006607 407 DAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAA----------AVVVNSLPKTTAHVLLRGTVTANK 476 (639)
Q Consensus 407 ~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnslta----------a~v~~~i~~~~~~V~~~Gatg~~k 476 (639)
.+.|+.|+++- . +|. .+ .|. -+.++-.|+.+.+ ...+...+...++|+++|. | +
T Consensus 178 ~~~~~~vi~i~--r-------~~~-~~--~p~-~~~~l~~gD~l~v~g~~~~l~~~~~~~~~~~~~~~~iiIiG~-G--~ 241 (453)
T PRK09496 178 PDIDVRVVAIF--R-------GGR-LI--IPR-GDTVIEAGDEVYFIGAREHIRAVMSEFGRLEKPVKRVMIVGG-G--N 241 (453)
T ss_pred CCCceEEEEEE--E-------CCE-EE--cCC-CCcEecCCCEEEEEeCHHHHHHHHHHhCccCCCCCEEEEECC-C--H
Confidence 35788888763 1 222 22 244 4444444444433 2223333335789999999 5 9
Q ss_pred hHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 477 VANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 477 ig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+|+.+++.|.++|.+|++ +++++.++++++.
T Consensus 242 ~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~ 274 (453)
T PRK09496 242 IGYYLAKLLEKEGYSVKLIERDPERAEELAEEL 274 (453)
T ss_pred HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC
Confidence 999999999999999998 8888999888764
No 224
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=92.47 E-value=0.15 Score=53.34 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=27.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccC--cEEEe--cchh
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKD 498 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~~--~~~~ 498 (639)
.|+|+|||| -||+.+++.|.++| .+|.. |+.+
T Consensus 1 ~vlvtGatG--~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATG--FLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccch--HHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 489999999 99999999999988 56666 6554
No 225
>PRK06198 short chain dehydrogenase; Provisional
Probab=92.47 E-value=0.26 Score=49.61 Aligned_cols=43 Identities=14% Similarity=0.191 Sum_probs=35.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+ |.+ |+.++.+.+.+++
T Consensus 6 ~k~vlItGa~g--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l 51 (260)
T PRK06198 6 GKVALVTGGTQ--GLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL 51 (260)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHH
Confidence 46799999998 8999999999999999 777 7766666555443
No 226
>PRK08264 short chain dehydrogenase; Validated
Probab=92.46 E-value=0.16 Score=50.48 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=32.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHH
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEK 502 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~ 502 (639)
.+.|+++|++| .||+++|+.|+++|. +|++ |+.++.++
T Consensus 6 ~~~vlItGgsg--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~ 46 (238)
T PRK08264 6 GKVVLVTGANR--GIGRAFVEQLLARGAAKVYAAARDPESVTD 46 (238)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCcccEEEEecChhhhhh
Confidence 46799999998 999999999999998 8888 66665543
No 227
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=92.44 E-value=0.69 Score=47.49 Aligned_cols=79 Identities=18% Similarity=0.123 Sum_probs=47.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEE-e--c----------chhhHHHHHhhCCc--ccccceeeecc--cccc
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA-T--I----------CKDDYEKLKLRIPV--EAQHNLVLSTS--YAAH 524 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~-~--~----------~~~~~~~l~~~~~~--~~~~~l~~~~~--~~~~ 524 (639)
..++|++.|- | +||+.+|+.|.+.|.+|+ + . +.+++.+++++-.. +.... ..+.. +-+.
T Consensus 30 ~~~~v~I~G~-G--~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~-~~~~~~~i~~~ 105 (227)
T cd01076 30 AGARVAIQGF-G--NVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGA-ERITNEELLEL 105 (227)
T ss_pred cCCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCc-eecCCccceee
Confidence 4679999994 6 999999999999999999 5 2 44555555554211 11000 00111 1114
Q ss_pred ceeEEE---EcCcCChhhhhcCC
Q 006607 525 KTKIWL---VGDDLTGKEQARAP 544 (639)
Q Consensus 525 ~~~vwi---vg~~~~~~~q~~a~ 544 (639)
+|+|.| .++.|+++...+.+
T Consensus 106 ~~Dvlip~a~~~~i~~~~~~~l~ 128 (227)
T cd01076 106 DCDILIPAALENQITADNADRIK 128 (227)
T ss_pred cccEEEecCccCccCHHHHhhce
Confidence 667766 56666666665443
No 228
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.43 E-value=0.27 Score=48.95 Aligned_cols=43 Identities=21% Similarity=0.314 Sum_probs=36.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 5 ~~~~lItG~~g--~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~ 49 (253)
T PRK08217 5 DKVIVITGGAQ--GLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC 49 (253)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45799999998 9999999999999999988 7777777776654
No 229
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.42 E-value=0.24 Score=50.70 Aligned_cols=43 Identities=14% Similarity=0.109 Sum_probs=32.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~ 506 (639)
+.++++|+++++-||+|+|+.|+++|.+|.+ |+. +..++++++
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~ 56 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEE 56 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHh
Confidence 5789999995335999999999999999988 542 234445444
No 230
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.40 E-value=0.31 Score=48.36 Aligned_cols=43 Identities=23% Similarity=0.318 Sum_probs=35.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
.+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 5 ~~~ilI~Gasg--~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 50 (247)
T PRK05565 5 GKVAIVTGASG--GIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI 50 (247)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 35799999998 9999999999999999877 5566666655553
No 231
>PRK06484 short chain dehydrogenase; Validated
Probab=92.37 E-value=0.29 Score=54.99 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=40.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
..+.++++|+++ -||+++|+.|.++|.+|.+ |+.++++++.++++.
T Consensus 4 ~~k~~lITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 51 (520)
T PRK06484 4 QSRVVLVTGAAG--GIGRAACQRFARAGDQVVVADRNVERARERADSLGP 51 (520)
T ss_pred CCeEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 346889999997 9999999999999999988 899999988887654
No 232
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.31 E-value=0.73 Score=49.29 Aligned_cols=140 Identities=15% Similarity=0.210 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCcE--EEeccccc-------ccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006607 392 REAINSLIEEAILEADAKGVKV--ISLGLLNQ-------GEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (639)
Q Consensus 392 ~~~in~~I~~Ai~~A~~~G~kv--~~LG~ln~-------~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (639)
..+-+.-+....+.|++.|++. +-|..-.+ ++++|.|- ++.++.= |.+++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl 121 (293)
T PRK14185 42 DGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF 121 (293)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCC
Confidence 3445555777788999999998 55554332 25788875 3344321 333432 123332
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHH
Q 006607 449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEK 502 (639)
Q Consensus 449 s----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~ 502 (639)
+ -|++.|++=+ +-.-++|+++|... -||+-+|..|.++ +..|++ .++-
T Consensus 122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T---- 195 (293)
T PRK14185 122 HPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSN--IVGKPMAQLMMQKAYPGDCTVTVCHSRS---- 195 (293)
T ss_pred CHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHcCCCCCCCEEEEecCCC----
Confidence 2 2777776644 44678999999997 9999999999988 678888 2111
Q ss_pred HHhhCCcccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCC
Q 006607 503 LKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 503 l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ +.++|+| +|+ .++++.. ++|+++||+. +.+
T Consensus 196 ----------~------nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~ 236 (293)
T PRK14185 196 ----------K------NLKKECLEADIIIAALGQPEFVKADMV---KEGAVVIDVG-TTR 236 (293)
T ss_pred ----------C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence 1 1222 3566666 443 4666555 9999999998 654
No 233
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=92.31 E-value=0.24 Score=50.63 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=27.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++|++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~ 37 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGI 37 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEE
Confidence 46789999973248999999999999999987
No 234
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.29 E-value=0.3 Score=51.46 Aligned_cols=44 Identities=18% Similarity=0.247 Sum_probs=35.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~ 507 (639)
+.+.++++|++| -||+++|+.|+++|.+|.+ + +.++.+++.+++
T Consensus 11 ~~k~~lVTGas~--gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i 57 (306)
T PRK07792 11 SGKVAVVTGAAA--GLGRAEALGLARLGATVVVNDVASALDASDVLDEI 57 (306)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHH
Confidence 456899999998 9999999999999999998 3 345566665554
No 235
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.27 E-value=0.22 Score=51.50 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 497 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~ 497 (639)
.+.++++|+++++-||+|+|+.|+++|.+|.+ |++
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~ 43 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE 43 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence 46799999994236999999999999999998 554
No 236
>PLN02214 cinnamoyl-CoA reductase
Probab=92.27 E-value=0.32 Score=52.12 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=30.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
.++|+|+|++| -||+++++.|.++|.+|.. |+.++
T Consensus 10 ~~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 10 GKTVCVTGAGG--YIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 45799999999 9999999999999999987 65554
No 237
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=92.25 E-value=0.3 Score=49.56 Aligned_cols=44 Identities=18% Similarity=0.190 Sum_probs=34.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~ 507 (639)
..+.++++|++| -||+++|+.|+++|.+|.+ | +++..+++.+++
T Consensus 6 ~~k~~lItGa~~--gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l 52 (261)
T PRK08936 6 EGKVVVITGGST--GLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEI 52 (261)
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 346899999998 9999999999999999987 4 444555555543
No 238
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=92.24 E-value=0.23 Score=55.01 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=60.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcccccceeeecc---ccc--cceeEEE--EcC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS---YAA--HKTKIWL--VGD 533 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~---~~~--~~~~vwi--vg~ 533 (639)
..|++.|+ | .||+++|..|+++| .+|++ |+.+...+++.....+.+-..+.+.. +.+ ++.+++| +.-
T Consensus 2 ~~ilviGa-G--~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 2 MKILVIGA-G--GVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CcEEEECC-c--hhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 47899999 7 99999999999998 89998 99999999988753333222233443 333 5567766 222
Q ss_pred cCChhh-hhcCCCCceeecccc
Q 006607 534 DLTGKE-QARAPKGTIFIPYTQ 554 (639)
Q Consensus 534 ~~~~~~-q~~a~~G~~f~~~~~ 554 (639)
..+..= +.=++.|++++|.|-
T Consensus 79 ~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 79 FVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred hhhHHHHHHHHHhCCCEEEccc
Confidence 222211 234578999999995
No 239
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=92.24 E-value=0.3 Score=51.35 Aligned_cols=44 Identities=20% Similarity=0.297 Sum_probs=38.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.++++|++. -||+|+|+.|++.|-+|.+ |++|+.++.++++
T Consensus 7 ~gkvalVTG~s~--GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~ 52 (270)
T KOG0725|consen 7 AGKVALVTGGSS--GIGKAIALLLAKAGAKVVITGRSEERLEETAQEL 52 (270)
T ss_pred CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 356788999996 8999999999999999999 9999988887763
No 240
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=92.23 E-value=0.26 Score=51.75 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=32.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l 503 (639)
.+.|+++|++| -||+++++.|.++|.+|.+ |+.++.++.
T Consensus 5 ~k~vlVtG~~G--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (325)
T PLN02989 5 GKVVCVTGASG--YIASWIVKLLLFRGYTINATVRDPKDRKKT 45 (325)
T ss_pred CCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCCcchhhH
Confidence 36899999999 9999999999999999876 666554443
No 241
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=92.19 E-value=0.24 Score=50.09 Aligned_cols=44 Identities=16% Similarity=0.251 Sum_probs=37.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.|+++|++| -||+++|+.|+++|.++.+ |+.++.+++.+++
T Consensus 10 ~~k~vlVtG~s~--gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l 55 (255)
T PRK06113 10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEI 55 (255)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 457899999998 9999999999999999988 7777777776654
No 242
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.18 E-value=0.21 Score=51.15 Aligned_cols=46 Identities=17% Similarity=0.277 Sum_probs=35.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-----~~~~~~~~l~~~~~ 508 (639)
.+.|+++|+++++-||+|+|+.|+++|.+|.+ |++++.+++.++.+
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~ 56 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG 56 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC
Confidence 46799999753247999999999999999987 33566666666543
No 243
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.17 E-value=0.15 Score=53.77 Aligned_cols=88 Identities=15% Similarity=0.141 Sum_probs=56.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc-------------cc---ccceeeec-cccc-
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-------------EA---QHNLVLST-SYAA- 523 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~-------------~~---~~~l~~~~-~~~~- 523 (639)
++|.++|+- .+|+.+|..|++.|.+|++ ++++.+++.++++.. +. ....+..+ ++++
T Consensus 6 ~~V~ViGaG---~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 82 (286)
T PRK07819 6 QRVGVVGAG---QMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDLGDF 82 (286)
T ss_pred cEEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCHHHh
Confidence 579999995 9999999999999999999 788877763322111 10 01112223 4655
Q ss_pred cceeEEE--EcCcCChh-----hhhcC--CCCceeecccc
Q 006607 524 HKTKIWL--VGDDLTGK-----EQARA--PKGTIFIPYTQ 554 (639)
Q Consensus 524 ~~~~vwi--vg~~~~~~-----~q~~a--~~G~~f~~~~~ 554 (639)
++++++| |-+.++-+ +..++ ++|++++.-+-
T Consensus 83 ~~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS 122 (286)
T PRK07819 83 ADRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTS 122 (286)
T ss_pred CCCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 7887766 32332222 12243 88998887665
No 244
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=92.15 E-value=0.21 Score=53.27 Aligned_cols=47 Identities=13% Similarity=0.199 Sum_probs=38.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (639)
..+.++++|+.+.+-||+|+|+.|+++|-+|.+ |+.+++++++.++.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~ 55 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLR 55 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhhh
Confidence 456899999931148999999999999999999 88899988876654
No 245
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.14 E-value=0.32 Score=49.67 Aligned_cols=45 Identities=22% Similarity=0.305 Sum_probs=35.7
Q ss_pred CcEEEEecc--cCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhhCCc
Q 006607 463 TAHVLLRGT--VTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Ga--tg~~kig~ava~~L~~~~~~v~~--~~~--~~~~~l~~~~~~ 509 (639)
.+.++++|+ ++ -||+++|+.|+++|.+|.+ |++ +..++++++++.
T Consensus 7 ~k~~lItGa~~s~--GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~ 57 (256)
T PRK07889 7 GKRILVTGVITDS--SIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPE 57 (256)
T ss_pred CCEEEEeCCCCcc--hHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCC
Confidence 357899999 54 8999999999999999998 443 556777776643
No 246
>PRK07023 short chain dehydrogenase; Provisional
Probab=92.14 E-value=0.29 Score=48.94 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=29.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (639)
..|+++|++| -||+++|+.|+++|.+|++ |+.+
T Consensus 2 ~~vlItGasg--giG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 2 VRAIVTGHSR--GLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred ceEEEecCCc--chHHHHHHHHHhCCCEEEEEecCcc
Confidence 3689999998 9999999999999999988 5544
No 247
>PRK06841 short chain dehydrogenase; Provisional
Probab=92.11 E-value=0.25 Score=49.68 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
..+.|+++|++| .||+++|+.|+++|.+|.+ |+.+.
T Consensus 14 ~~k~vlItGas~--~IG~~la~~l~~~G~~Vi~~~r~~~~ 51 (255)
T PRK06841 14 SGKVAVVTGGAS--GIGHAIAELFAAKGARVALLDRSEDV 51 (255)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 356899999998 9999999999999999998 65543
No 248
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=92.07 E-value=0.24 Score=50.56 Aligned_cols=43 Identities=16% Similarity=0.296 Sum_probs=36.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~ 508 (639)
..|+++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++.
T Consensus 2 ~~~lITGas~--gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~ 47 (267)
T TIGR02685 2 PAAVVTGAAK--RIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELN 47 (267)
T ss_pred CEEEEeCCCC--cHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHH
Confidence 4689999998 8999999999999999988 45677777766654
No 249
>PRK07201 short chain dehydrogenase; Provisional
Probab=92.04 E-value=0.27 Score=56.93 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 371 ~k~vlItGas~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 415 (657)
T PRK07201 371 GKVVLITGASS--GIGRATAIKVAEAGATVFLVARNGEALDELVAEI 415 (657)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 8888888887764
No 250
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=91.98 E-value=0.2 Score=50.77 Aligned_cols=43 Identities=19% Similarity=0.255 Sum_probs=37.2
Q ss_pred EEEEecccCchhhHHHHHHHHhc----cCcEEEe--cchhhHHHHHhhCCc
Q 006607 465 HVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~----~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.|+++|+++ -||+++|+.|++ +|.+|.+ |++++.+++++++..
T Consensus 2 ~vlItGas~--GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~ 50 (256)
T TIGR01500 2 VCLVTGASR--GFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGA 50 (256)
T ss_pred EEEEecCCC--chHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHh
Confidence 578999997 999999999997 7999988 888999888877543
No 251
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.94 E-value=0.25 Score=50.60 Aligned_cols=46 Identities=17% Similarity=0.232 Sum_probs=36.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c---chhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---CKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~---~~~~~~~l~~~~~ 508 (639)
.+.++++|+++.+-||+++|+.|+++|.+|.+ | ++++++++++++.
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~ 57 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE 57 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC
Confidence 46789999971027999999999999999998 3 2467788877764
No 252
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.89 E-value=0.26 Score=51.67 Aligned_cols=92 Identities=15% Similarity=0.214 Sum_probs=60.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccc----------------cceeeec-ccc-c
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ----------------HNLVLST-SYA-A 523 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~----------------~~l~~~~-~~~-~ 523 (639)
++|.++|+- .+|+++|..|++.|.+|++ +++++.+++++++..... ...+..+ +++ +
T Consensus 2 ~~V~VIG~G---~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 2 EKLVVVGAG---VMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred cEEEEECcc---HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 479999995 9999999999999999999 888888887654221100 0012223 465 3
Q ss_pred -cceeEEE--EcCcCChh-----h-hhcCCCCcee-ecccccCCc
Q 006607 524 -HKTKIWL--VGDDLTGK-----E-QARAPKGTIF-IPYTQIPPR 558 (639)
Q Consensus 524 -~~~~vwi--vg~~~~~~-----~-q~~a~~G~~f-~~~~~~~~~ 558 (639)
++++++| +.+..+-+ + ...+++|+++ ++-|-+|+.
T Consensus 79 ~~~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~~~~ 123 (288)
T PRK09260 79 VADADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTMSPT 123 (288)
T ss_pred hcCCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCCCHH
Confidence 7787766 33332211 1 1246889866 677777877
No 253
>PRK07069 short chain dehydrogenase; Validated
Probab=91.83 E-value=0.2 Score=50.08 Aligned_cols=41 Identities=20% Similarity=0.331 Sum_probs=35.0
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCC
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIP 508 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~-~~~~~~l~~~~~ 508 (639)
|+++|++| -||+++|+.|+++|.+|.+ |+ .++++.+++++.
T Consensus 2 ilVtG~~~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~ 45 (251)
T PRK07069 2 AFITGAAG--GLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEIN 45 (251)
T ss_pred EEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH
Confidence 79999998 9999999999999999988 65 677777776643
No 254
>PRK06114 short chain dehydrogenase; Provisional
Probab=91.83 E-value=0.4 Score=48.49 Aligned_cols=44 Identities=20% Similarity=0.279 Sum_probs=34.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~ 507 (639)
..+.++++|++| -||+++|+.|+++|.+|.+ |+. +..+++.+++
T Consensus 7 ~~k~~lVtG~s~--gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l 53 (254)
T PRK06114 7 DGQVAFVTGAGS--GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHI 53 (254)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 346899999998 9999999999999999998 543 3455554443
No 255
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=91.81 E-value=0.19 Score=53.18 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=68.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcCc----
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD---- 534 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~---- 534 (639)
+|.++|.. .+|.++|+.|.+.|.+|.+ |++++.++++++- .. ..++.++ ++++++| +-+.
T Consensus 3 ~Ig~IGlG---~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g-~~------~~~s~~~~~~~aDvVi~~vp~~~~~~ 72 (296)
T PRK15461 3 AIAFIGLG---QMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG-AT------PAASPAQAAAGAEFVITMLPNGDLVR 72 (296)
T ss_pred eEEEEeeC---HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC-Cc------ccCCHHHHHhcCCEEEEecCCHHHHH
Confidence 58888866 9999999999999999998 8888888887651 10 1223332 5565544 2111
Q ss_pred --CChh-h-hhcCCCCceeecccccCCcCC--------CCCceeecCCccccCC
Q 006607 535 --LTGK-E-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMIIPP 576 (639)
Q Consensus 535 --~~~~-~-q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~~P~ 576 (639)
+... . ...+++|+++++.|.++|... .+.+.|.+.|.+..|.
T Consensus 73 ~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~~ 126 (296)
T PRK15461 73 SVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSD 126 (296)
T ss_pred HHHcCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCHH
Confidence 1111 1 123589999999999988722 1567788888877665
No 256
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=91.76 E-value=0.21 Score=54.06 Aligned_cols=39 Identities=18% Similarity=0.156 Sum_probs=34.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
+.+.|+|+||+| =||+.|+..|-++|..|.- |++++-++
T Consensus 5 ~~~~VcVTGAsG--fIgswivk~LL~rGY~V~gtVR~~~~~k~ 45 (327)
T KOG1502|consen 5 EGKKVCVTGASG--FIGSWIVKLLLSRGYTVRGTVRDPEDEKK 45 (327)
T ss_pred CCcEEEEeCCch--HHHHHHHHHHHhCCCEEEEEEcCcchhhh
Confidence 678999999999 9999999999999999987 88887433
No 257
>PRK06179 short chain dehydrogenase; Provisional
Probab=91.75 E-value=0.2 Score=50.99 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=30.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~ 501 (639)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+
T Consensus 5 ~~vlVtGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~ 42 (270)
T PRK06179 5 KVALVTGASS--GIGRATAEKLARAGYRVFGTSRNPARAA 42 (270)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCChhhcc
Confidence 5799999998 9999999999999999998 6655443
No 258
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.74 E-value=0.34 Score=51.58 Aligned_cols=146 Identities=27% Similarity=0.326 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh-
Q 006607 394 AINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS- 449 (639)
Q Consensus 394 ~in~~I~~Ai~~A~~~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns- 449 (639)
+-+.-+...++.|++.|++..-. . .+...++||.|- ++.++.= |++++. +=|||=+
T Consensus 45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~ 124 (285)
T PRK14189 45 ASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHV 124 (285)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCCh
Confidence 44455667777899999887543 2 233346788875 3333311 233441 2245543
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006607 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (639)
Q Consensus 450 ---------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (639)
-|+..|++=+ +-..++|.++|.++ -||+-+|..|.++|..|++ .++
T Consensus 125 ~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVt~~hs~----------- 191 (285)
T PRK14189 125 ANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSN--IVGKPMAMLLLQAGATVTICHSK----------- 191 (285)
T ss_pred hhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEecCC-----------
Confidence 3666666543 44688999999997 8899999999999999998 211
Q ss_pred cccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006607 509 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 565 (639)
Q Consensus 509 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 565 (639)
.. ++++ ++++++| +| ..++++. .++|+++||+. +++. ++--|+-
T Consensus 192 ---t~------~l~~~~~~ADIVV~avG~~~~i~~~~---ik~gavVIDVG-in~~~~gkl~GDVd 244 (285)
T PRK14189 192 ---TR------DLAAHTRQADIVVAAVGKRNVLTADM---VKPGATVIDVG-MNRDDAGKLCGDVD 244 (285)
T ss_pred ---CC------CHHHHhhhCCEEEEcCCCcCccCHHH---cCCCCEEEEcc-ccccCCCCeeCCcc
Confidence 00 1221 3555655 33 2456544 49999999998 6652 4445554
No 259
>PRK08219 short chain dehydrogenase; Provisional
Probab=91.72 E-value=0.24 Score=48.56 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=34.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
+.++|+|++| .||+++|+.|+++ .+|.. |+.++.++++++.
T Consensus 4 ~~vlVtG~~g--~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~ 46 (227)
T PRK08219 4 PTALITGASR--GIGAAIARELAPT-HTLLLGGRPAERLDELAAEL 46 (227)
T ss_pred CEEEEecCCc--HHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh
Confidence 5799999998 9999999999988 88887 8888877776543
No 260
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=91.68 E-value=0.9 Score=45.58 Aligned_cols=147 Identities=13% Similarity=0.173 Sum_probs=85.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEE---EcCcCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL---VGDDLT 536 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi---vg~~~~ 536 (639)
..++|.+.|.. ++|+++|+.|.+.|.+|+. ++.++.++++++...+. +....+-+.+++|.+ .|..|+
T Consensus 27 ~gk~v~I~G~G---~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~----v~~~~l~~~~~Dv~vp~A~~~~I~ 99 (200)
T cd01075 27 EGKTVAVQGLG---KVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV----VAPEEIYSVDADVFAPCALGGVIN 99 (200)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE----EcchhhccccCCEEEecccccccC
Confidence 45789999995 9999999999999999999 77778888877653211 111111114677766 567889
Q ss_pred hhhhhcCCCCceeecccccCCc-CCCCCceeecCCccccCCCCccccccccccCcchhhhHHHHHHHHHhc---CCCCCc
Q 006607 537 GKEQARAPKGTIFIPYTQIPPR-KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALE---GWDLNE 612 (639)
Q Consensus 537 ~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alE---gw~~~e 612 (639)
++...+++.. .++.-+. .|- ..+.|=...+.+++-+|+-+-|-. |++..-- |..+.|
T Consensus 100 ~~~~~~l~~~-~v~~~AN-~~~~~~~~~~~L~~~Gi~~~Pd~~~NaG-----------------Gv~~~~~e~~~~~~~~ 160 (200)
T cd01075 100 DDTIPQLKAK-AIAGAAN-NQLADPRHGQMLHERGILYAPDYVVNAG-----------------GLINVADELYGGNEAR 160 (200)
T ss_pred HHHHHHcCCC-EEEECCc-CccCCHhHHHHHHHCCCEEeCceeeeCc-----------------CceeehhHHhCCcHHH
Confidence 9888777644 3444432 111 122222233444455554322111 1111000 101223
Q ss_pred cch-h---hhhHHHHHHHHHhcCCcc
Q 006607 613 CGQ-T---MCDIHQVWHASLRHGFRP 634 (639)
Q Consensus 613 ~G~-i---v~~i~~iw~aa~kHGF~p 634 (639)
.-+ + .+.+.+|++.|.++|-.|
T Consensus 161 ~~~~~~~~~~~~~~v~~~a~~~~~~~ 186 (200)
T cd01075 161 VLAKVEAIYDTLLEIFAQAKQDGITT 186 (200)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence 323 2 588999999999998765
No 261
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=91.67 E-value=0.35 Score=48.79 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=33.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++ ..+++.+++
T Consensus 8 ~k~vlVtGas~--gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~ 51 (260)
T PRK12823 8 GKVVVVTGAAQ--GIGRGVALRAAAEGARVVLVDRSE-LVHEVAAEL 51 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHH
Confidence 46799999998 9999999999999999988 543 344454443
No 262
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.61 E-value=0.27 Score=49.62 Aligned_cols=42 Identities=21% Similarity=0.374 Sum_probs=33.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..++++++
T Consensus 7 ~k~~lItGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~ 51 (255)
T PRK06463 7 GKVALITGGTR--GIGRAIAEAFLREGAKVAVLYNSAENEAKELREK 51 (255)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC
Confidence 46899999998 9999999999999999987 344555556543
No 263
>PLN03139 formate dehydrogenase; Provisional
Probab=91.59 E-value=0.11 Score=57.59 Aligned_cols=99 Identities=14% Similarity=0.201 Sum_probs=65.3
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-----
Q 006607 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----- 531 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----- 531 (639)
-..++|.++|. | .||+++|+.|..-|.+|.. ++..+-+ ..++.+.. ...++++ +.++++++
T Consensus 197 L~gktVGIVG~-G--~IG~~vA~~L~afG~~V~~~d~~~~~~~-~~~~~g~~------~~~~l~ell~~sDvV~l~lPlt 266 (386)
T PLN03139 197 LEGKTVGTVGA-G--RIGRLLLQRLKPFNCNLLYHDRLKMDPE-LEKETGAK------FEEDLDAMLPKCDVVVINTPLT 266 (386)
T ss_pred CCCCEEEEEee-c--HHHHHHHHHHHHCCCEEEEECCCCcchh-hHhhcCce------ecCCHHHHHhhCCEEEEeCCCC
Confidence 35678999995 5 9999999999999999988 3221111 11111111 1234554 56766552
Q ss_pred ---cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006607 532 ---GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 532 ---g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
-..++.+...++++|+.++.++| ++.+ +++ -|++.++-
T Consensus 267 ~~T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~l~GAaLDV~~~EP 322 (386)
T PLN03139 267 EKTRGMFNKERIAKMKKGVLIVNNARGAIMDTQAVADACSSGHIGGYGGDVWYPQP 322 (386)
T ss_pred HHHHHHhCHHHHhhCCCCeEEEECCCCchhhHHHHHHHHHcCCceEEEEcCCCCCC
Confidence 23356778899999999999999 4433 444 68887774
No 264
>PRK05855 short chain dehydrogenase; Validated
Probab=91.52 E-value=0.37 Score=54.12 Aligned_cols=44 Identities=18% Similarity=0.214 Sum_probs=38.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
...++++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 315 ~~~~lv~G~s~--giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 360 (582)
T PRK05855 315 GKLVVVTGAGS--GIGRETALAFAREGAEVVASDIDEAAAERTAELIR 360 (582)
T ss_pred CCEEEEECCcC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46789999998 9999999999999999988 88888888776653
No 265
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=91.50 E-value=0.32 Score=48.36 Aligned_cols=40 Identities=25% Similarity=0.394 Sum_probs=31.8
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
|+++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++
T Consensus 1 vlItGas~--giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l 43 (239)
T TIGR01831 1 VLVTGASR--GIGRAIANRLAADGFEICVHYHSGRSDAESVVSAI 43 (239)
T ss_pred CEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 58999997 9999999999999999877 3345555555543
No 266
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=91.35 E-value=0.41 Score=41.37 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=44.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccC---cEEEe---cchhhHHHHHhhCCcccccceeeec-ccc-c-cceeEEEE
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMG---IKVAT---ICKDDYEKLKLRIPVEAQHNLVLST-SYA-A-HKTKIWLV 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~---~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~-~~~-~-~~~~vwiv 531 (639)
+|.++|+- ++|.|+++.|.+.| .+|.+ |++|+.++++++.+.+. .. +.+ . ++++++|+
T Consensus 1 kI~iIG~G---~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~~advvil 67 (96)
T PF03807_consen 1 KIGIIGAG---NMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQA------TADDNEEAAQEADVVIL 67 (96)
T ss_dssp EEEEESTS---HHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEE------ESEEHHHHHHHTSEEEE
T ss_pred CEEEECCC---HHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccc------ccCChHHhhccCCEEEE
Confidence 46677665 99999999999999 89985 99999999999977433 22 333 3 66777663
No 267
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=91.35 E-value=0.23 Score=46.74 Aligned_cols=66 Identities=17% Similarity=0.212 Sum_probs=43.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE---cCc
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV---GDD 534 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv---g~~ 534 (639)
.-+|-++|+- |+|.+++++|.+.|..|.- |+.+.-++++.+++... +.++++ .+++++++ ||.
T Consensus 10 ~l~I~iIGaG---rVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~------~~~~~~~~~~aDlv~iavpDda 80 (127)
T PF10727_consen 10 RLKIGIIGAG---RVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGA------ILDLEEILRDADLVFIAVPDDA 80 (127)
T ss_dssp --EEEEECTS---CCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----------TTGGGCC-SEEEE-S-CCH
T ss_pred ccEEEEECCC---HHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccc------ccccccccccCCEEEEEechHH
Confidence 4578999994 9999999999999999876 77778888887777655 444443 67788664 555
Q ss_pred CCh
Q 006607 535 LTG 537 (639)
Q Consensus 535 ~~~ 537 (639)
|.+
T Consensus 81 I~~ 83 (127)
T PF10727_consen 81 IAE 83 (127)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 268
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=91.35 E-value=0.46 Score=47.48 Aligned_cols=30 Identities=17% Similarity=0.320 Sum_probs=27.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 ~k~~lVtG~s~--giG~~~a~~l~~~G~~vv~ 32 (246)
T PRK12938 3 QRIAYVTGGMG--GIGTSICQRLHKDGFKVVA 32 (246)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCEEEE
Confidence 36789999998 9999999999999999887
No 269
>PRK12747 short chain dehydrogenase; Provisional
Probab=91.34 E-value=0.27 Score=49.44 Aligned_cols=43 Identities=26% Similarity=0.292 Sum_probs=35.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ +++++.+++..++
T Consensus 4 ~k~~lItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 49 (252)
T PRK12747 4 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI 49 (252)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence 36899999998 9999999999999999987 4556666665554
No 270
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=91.31 E-value=0.39 Score=51.46 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=28.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..++|+|+|+|| =||+.+++.|.++|.+|+.
T Consensus 14 ~~~~vlVtGatG--fiG~~lv~~L~~~g~~V~~ 44 (348)
T PRK15181 14 APKRWLITGVAG--FIGSGLLEELLFLNQTVIG 44 (348)
T ss_pred cCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 457899999999 9999999999999999876
No 271
>PRK07791 short chain dehydrogenase; Provisional
Probab=91.27 E-value=0.42 Score=49.76 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=36.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---------hhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---------~~~~~l~~~~~ 508 (639)
.+.++++|+++ -||+++|+.|+++|.+|.+ ++. ++.+++.+++.
T Consensus 6 ~k~~lITGas~--GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~ 60 (286)
T PRK07791 6 GRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV 60 (286)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHH
Confidence 46889999997 9999999999999999988 444 66777666643
No 272
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=91.24 E-value=0.41 Score=47.38 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=33.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~ 506 (639)
+.++++|++| -||+++|+.|+++|.+|.+ | ++++.+++.++
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 44 (242)
T TIGR01829 1 RIALVTGGMG--GIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE 44 (242)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence 4689999998 9999999999999999887 4 55556555443
No 273
>PRK12744 short chain dehydrogenase; Provisional
Probab=91.24 E-value=0.25 Score=49.99 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=26.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 8 ~k~vlItGa~~--gIG~~~a~~l~~~G~~vv~ 37 (257)
T PRK12744 8 GKVVLIAGGAK--NLGGLIARDLAAQGAKAVA 37 (257)
T ss_pred CcEEEEECCCc--hHHHHHHHHHHHCCCcEEE
Confidence 36899999998 9999999999999999554
No 274
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=91.15 E-value=0.36 Score=46.77 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=59.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccc----cee-----------eecc----c
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH----NLV-----------LSTS----Y 521 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~----~l~-----------~~~~----~ 521 (639)
.++|+|+|+- .+|...++.|.+-|.+|+. .+.++.++++......... .+. .... +
T Consensus 20 p~~vvv~G~G---~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 96 (168)
T PF01262_consen 20 PAKVVVTGAG---RVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF 96 (168)
T ss_dssp T-EEEEESTS---HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred CeEEEEECCC---HHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence 4688888865 9999999999999999999 5555666555442221111 000 0111 2
Q ss_pred cc--cceeEEE---------EcCcCChhhhhcCCCCceeecccccCCc
Q 006607 522 AA--HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 522 ~~--~~~~vwi---------vg~~~~~~~q~~a~~G~~f~~~~~~~~~ 558 (639)
.+ +.++++| .-..++.++.++++||.+++|+| .+.-
T Consensus 97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis-~D~g 143 (168)
T PF01262_consen 97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS-CDQG 143 (168)
T ss_dssp HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT-GGGT
T ss_pred HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE-ecCC
Confidence 22 5667766 23578999999999999999999 5554
No 275
>PRK06701 short chain dehydrogenase; Provisional
Probab=91.08 E-value=0.42 Score=49.95 Aligned_cols=43 Identities=23% Similarity=0.347 Sum_probs=33.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~ 507 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++ ++.+.+.+++
T Consensus 46 ~k~iLItGasg--gIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~ 91 (290)
T PRK06701 46 GKVALITGGDS--GIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRV 91 (290)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 46799999998 9999999999999999988 443 3444444443
No 276
>PRK08226 short chain dehydrogenase; Provisional
Probab=91.07 E-value=0.46 Score=48.06 Aligned_cols=34 Identities=15% Similarity=0.367 Sum_probs=30.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |+++
T Consensus 6 ~~~~lItG~s~--giG~~la~~l~~~G~~Vv~~~r~~~ 41 (263)
T PRK08226 6 GKTALITGALQ--GIGEGIARVFARHGANLILLDISPE 41 (263)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHH
Confidence 46899999998 9999999999999999998 5543
No 277
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.05 E-value=0.47 Score=50.48 Aligned_cols=161 Identities=19% Similarity=0.195 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC-
Q 006607 393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS- 448 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn- 448 (639)
.+-+.-+..-++.|++.|++. .-|. +++..+++|.|- ++.++.= |++++. +=|||=
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~ 123 (284)
T PRK14193 44 PGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLH 123 (284)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCC
Confidence 345555667778899999985 4444 333446788874 3333321 232331 224443
Q ss_pred ---------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhc--cCcEEEe-cchhhHHHHHh
Q 006607 449 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT-ICKDDYEKLKL 505 (639)
Q Consensus 449 ---------------sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~--~~~~v~~-~~~~~~~~l~~ 505 (639)
.-|+..|++=+ +-.-++|+++|.+. -||+-+|..|.+ +|..|++ .++
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~~~atVtvchs~-------- 193 (284)
T PRK14193 124 PTNLGRLVLNEPAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGV--TVGRPIGLLLTRRSENATVTLCHTG-------- 193 (284)
T ss_pred hhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHhhccCCCEEEEeCCC--------
Confidence 23677776544 44678999999998 999999999997 7888988 221
Q ss_pred hCCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce----eecCCcc
Q 006607 506 RIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF----YHSTPAM 572 (639)
Q Consensus 506 ~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~----y~~~~a~ 572 (639)
+. ++++ +.++|+| +| +.++++.. ++|+++||+. +++. ++.-|+- -.-...+
T Consensus 194 ------T~------~l~~~~k~ADIvV~AvGkp~~i~~~~i---k~GavVIDvG-in~~~~gkl~GDvd~~v~~~a~~iT 257 (284)
T PRK14193 194 ------TR------DLAAHTRRADIIVAAAGVAHLVTADMV---KPGAAVLDVG-VSRAGDGKLVGDVHPDVWEVAGAVS 257 (284)
T ss_pred ------CC------CHHHHHHhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-ccccCCCcEEeecCHhHHhhCCEEe
Confidence 01 1222 3566655 34 35777777 9999999998 6652 3334444 2222335
Q ss_pred ccCCCCc
Q 006607 573 IIPPSLS 579 (639)
Q Consensus 573 ~~P~~~~ 579 (639)
.||+.+-
T Consensus 258 PVPGGVG 264 (284)
T PRK14193 258 PNPGGVG 264 (284)
T ss_pred CCCCChh
Confidence 5777654
No 278
>PRK07041 short chain dehydrogenase; Provisional
Probab=91.05 E-value=0.28 Score=48.49 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=34.4
Q ss_pred EEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 467 LLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 1 lItGas~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 42 (230)
T PRK07041 1 LVVGGSS--GIGLALARAFAAEGARVTIASRSRDRLAAAARALG 42 (230)
T ss_pred CeecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 4789998 9999999999999999988 88888877766653
No 279
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=91.00 E-value=1.6 Score=44.78 Aligned_cols=88 Identities=14% Similarity=0.125 Sum_probs=58.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEE--EcCcCCh
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL--VGDDLTG 537 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi--vg~~~~~ 537 (639)
....|++.|++| .+|.++++.+...|.+|.. +++++.+.+++ ++... .+.....+.....++++ +|....+
T Consensus 132 ~~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~--~~~~~~~~~~~~~d~vl~~~g~~~~~ 206 (305)
T cd08270 132 LGRRVLVTGASG--GVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAE--VVVGGSELSGAPVDLVVDSVGGPQLA 206 (305)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE--EEeccccccCCCceEEEECCCcHHHH
Confidence 367999999998 9999999999999999877 77888888866 44321 11111111113456666 4444445
Q ss_pred hhhhcCCCCceeecccc
Q 006607 538 KEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 538 ~~q~~a~~G~~f~~~~~ 554 (639)
+-.+.+++|-+++.+..
T Consensus 207 ~~~~~l~~~G~~v~~g~ 223 (305)
T cd08270 207 RALELLAPGGTVVSVGS 223 (305)
T ss_pred HHHHHhcCCCEEEEEec
Confidence 55567778888888763
No 280
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=90.90 E-value=0.65 Score=53.39 Aligned_cols=44 Identities=14% Similarity=0.122 Sum_probs=38.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|+ | -+|+|+|..|.+.|.+|.+ |+.++.+++.++++
T Consensus 378 ~~k~vlIlGa-G--GagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~ 423 (529)
T PLN02520 378 AGKLFVVIGA-G--GAGKALAYGAKEKGARVVIANRTYERAKELADAVG 423 (529)
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence 4578999999 5 7999999999999999888 88899999987763
No 281
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=90.87 E-value=0.32 Score=48.66 Aligned_cols=43 Identities=23% Similarity=0.326 Sum_probs=35.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (639)
.+.++++|++| -||+++|+.|+++|.+|++ +++++.+++.+++
T Consensus 6 ~~~~lItG~s~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l 51 (247)
T PRK12935 6 GKVAIVTGGAK--GIGKAITVALAQEGAKVVINYNSSKEAAENLVNEL 51 (247)
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHH
Confidence 46899999998 9999999999999999987 4566666665554
No 282
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=90.84 E-value=0.37 Score=53.00 Aligned_cols=41 Identities=22% Similarity=0.229 Sum_probs=33.9
Q ss_pred cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (639)
Q Consensus 458 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (639)
+.+....+|+|+|+|| -||+++++.|.++|.+|.. |+.++.
T Consensus 55 ~~~~~~~kVLVtGatG--~IG~~l~~~Ll~~G~~V~~l~R~~~~~ 97 (390)
T PLN02657 55 SKEPKDVTVLVVGATG--YIGKFVVRELVRRGYNVVAVAREKSGI 97 (390)
T ss_pred ccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEEechhhc
Confidence 3444567899999999 9999999999999999988 665443
No 283
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=90.78 E-value=0.31 Score=51.07 Aligned_cols=83 Identities=16% Similarity=0.231 Sum_probs=56.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEE--EcCc--CC-
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD--LT- 536 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--vg~~--~~- 536 (639)
|.++|. | .+|+++|+.|++.|.+|++ |++++.+.+++. +. ...++.+ . ++++++| +-+. +.
T Consensus 2 IgvIG~-G--~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~------~~~~~~~~~~~~aDivi~~vp~~~~~~~ 71 (291)
T TIGR01505 2 VGFIGL-G--IMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GA------VTAETARQVTEQADVIFTMVPDSPQVEE 71 (291)
T ss_pred EEEEEe-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CC------cccCCHHHHHhcCCEEEEecCCHHHHHH
Confidence 678886 4 9999999999999999998 888888887654 11 1122333 2 5666644 2221 11
Q ss_pred ----hhh-hhcCCCCceeecccccCCc
Q 006607 537 ----GKE-QARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 537 ----~~~-q~~a~~G~~f~~~~~~~~~ 558 (639)
+++ ...+++|+++++.|.++|.
T Consensus 72 v~~~~~~~~~~~~~g~iivd~st~~~~ 98 (291)
T TIGR01505 72 VAFGENGIIEGAKPGKTLVDMSSISPI 98 (291)
T ss_pred HHcCcchHhhcCCCCCEEEECCCCCHH
Confidence 111 2356899999999998885
No 284
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.71 E-value=0.4 Score=51.24 Aligned_cols=138 Identities=21% Similarity=0.260 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006607 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (639)
Q Consensus 394 ~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 442 (639)
+-+.-+...++.|++.|++.-- |. ++...++||.|- ++.++.= |++++.
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~ 124 (294)
T PRK14187 45 ASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHN 124 (294)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 4445566677889999988654 43 233346778885 4444421 333431
Q ss_pred ----eeecCC---hh---HHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006607 443 ----KVVDGS---SL---AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (639)
Q Consensus 443 ----rvv~Gn---sl---taa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (639)
|+..|+ .+ |+++|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 125 ~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVt~chs~T-------- 194 (294)
T PRK14187 125 ENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSN--IVGKPMACLLLGENCTVTTVHSAT-------- 194 (294)
T ss_pred hhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhhCCCEEEEeCCCC--------
Confidence 333454 22 777776644 44688999999997 9999999999999999999 2111
Q ss_pred CCcccccceeeeccccc--cceeEEE--EcCc--CChhhhhcCCCCceeecccccCC
Q 006607 507 IPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ ++++|+| +|+- ++++.. ++|+++||+- +.+
T Consensus 195 ------~------~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gaiVIDVG-in~ 235 (294)
T PRK14187 195 ------R------DLADYCSKADILVAAVGIPNFVKYSWI---KKGAIVIDVG-INS 235 (294)
T ss_pred ------C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 1 1222 3566655 5544 777777 8999999996 544
No 285
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=90.68 E-value=0.21 Score=51.53 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=29.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (639)
.|+|+|||| .||+.+++.|.++|.+|.. |+.++.
T Consensus 1 ~ilVtGatG--~iG~~vv~~L~~~g~~V~~~~R~~~~~ 36 (285)
T TIGR03649 1 TILLTGGTG--KTASRIARLLQAASVPFLVASRSSSSS 36 (285)
T ss_pred CEEEEcCCC--hHHHHHHHHHHhCCCcEEEEeCCCccc
Confidence 389999999 9999999999999998888 776543
No 286
>PRK06720 hypothetical protein; Provisional
Probab=90.68 E-value=0.4 Score=46.78 Aligned_cols=44 Identities=18% Similarity=0.168 Sum_probs=36.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
..+.++++|+++ -||+++|+.|+++|.+|.+ ++.++.++..+++
T Consensus 15 ~gk~~lVTGa~~--GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l 60 (169)
T PRK06720 15 AGKVAIVTGGGI--GIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI 60 (169)
T ss_pred CCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 356889999997 8999999999999999988 6666666655554
No 287
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=90.63 E-value=0.5 Score=54.06 Aligned_cols=94 Identities=14% Similarity=0.110 Sum_probs=60.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC-------------cccc---cceee-ecccc
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQ---HNLVL-STSYA 522 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-------------~~~~---~~l~~-~~~~~ 522 (639)
.-++|.++|+ | .+|+.||..|++.|.+|++ ++++.+++.++.+. .+.. ...+. .++++
T Consensus 6 ~i~~V~VIGa-G--~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~ 82 (507)
T PRK08268 6 SIATVAVIGA-G--AMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA 82 (507)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH
Confidence 4578999999 4 9999999999999999999 88888877432221 1111 11122 23465
Q ss_pred c-cceeEEE--EcCcCChhh-----hhc-CCCCceee-cccccCCc
Q 006607 523 A-HKTKIWL--VGDDLTGKE-----QAR-APKGTIFI-PYTQIPPR 558 (639)
Q Consensus 523 ~-~~~~vwi--vg~~~~~~~-----q~~-a~~G~~f~-~~~~~~~~ 558 (639)
+ ++|+++| |-+.++-++ ... .++|+++. ..|-+|+.
T Consensus 83 ~~~~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl~i~ 128 (507)
T PRK08268 83 DLADCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLSIT 128 (507)
T ss_pred HhCCCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 5 7888777 333333222 222 48899884 77777765
No 288
>PRK06483 dihydromonapterin reductase; Provisional
Probab=90.61 E-value=0.4 Score=47.74 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=30.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++
T Consensus 2 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQ--RIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 35799999998 9999999999999999988 65543
No 289
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=90.58 E-value=2.5 Score=45.40 Aligned_cols=158 Identities=20% Similarity=0.259 Sum_probs=95.6
Q ss_pred HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607 406 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 456 (639)
Q Consensus 406 A~~~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~ 456 (639)
|.++|++++.|+.= +++|. |....-+.+.|+|+ ..++.|+.+.+ +=..++.
T Consensus 61 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 140 (304)
T TIGR00658 61 AYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVINGLTDLFHPCQALADLLTII 140 (304)
T ss_pred HHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 45699999999643 33444 35566678888887 35677777543 1134555
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhC---Ccccccceeeec-ccc-c-cce
Q 006607 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRI---PVEAQHNLVLST-SYA-A-HKT 526 (639)
Q Consensus 457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~~~---~~~~~~~l~~~~-~~~-~-~~~ 526 (639)
+..+. +..+|..+|..+ .+.+..+.+|.+-|++|.+-.++.++ .+.+++ ..+.+.. +..+ +++ + +++
T Consensus 141 e~~g~l~g~~v~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~a 217 (304)
T TIGR00658 141 EHFGKLKGVKVVYVGDGN--NVCNSLMLAGAKLGMDVVVATPEGYEPDADIVKKAQEIAKENGGS-VELTHDPVEAVKGA 217 (304)
T ss_pred HHhCCCCCcEEEEEeCCC--chHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence 54432 456899999986 89999999999999999993333332 111111 1112222 2233 455 4 888
Q ss_pred eEEEEcCcCChh------hhhcCCCCceeecccccCCc---CCCCCce-eecCCcc
Q 006607 527 KIWLVGDDLTGK------EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 572 (639)
Q Consensus 527 ~vwivg~~~~~~------~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~ 572 (639)
+|+.+..|.... +.... +-+| +++.+ ..|+||. .|.+|+.
T Consensus 218 Dvvy~~~w~~~~~~~~~~~~~~~-----~~~y-~l~~~~l~~~~~~~ivmHplP~~ 267 (304)
T TIGR00658 218 DVIYTDVWVSMGEEDKKEERLKL-----FRPY-QVNEELMELAKPEVIFMHCLPAH 267 (304)
T ss_pred CEEEEcCcccCccccccHHHHHH-----hcCC-cCCHHHHhhcCCCCEEECCCCCC
Confidence 887775544211 11111 2233 37777 5678886 5888874
No 290
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.53 E-value=0.48 Score=50.44 Aligned_cols=148 Identities=21% Similarity=0.258 Sum_probs=95.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006607 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (639)
Q Consensus 392 ~~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (639)
..+-+.-+...++.|++.|++..- |. +++.+++||.|- ++.++.= |.+++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl 121 (284)
T PRK14170 42 NQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGF 121 (284)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccC
Confidence 344555577778889999988643 44 334447788875 3344311 222331 224443
Q ss_pred h----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006607 449 S----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (639)
Q Consensus 449 s----------------ltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (639)
| -|++.|++=+. -.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 122 ~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVtichs~T-------- 191 (284)
T PRK14170 122 HPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSN--IVGKPVAQLLLNENATVTIAHSRT-------- 191 (284)
T ss_pred ChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence 3 36777766543 3688999999998 9999999999999999998 2211
Q ss_pred CCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006607 507 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 565 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 565 (639)
. ++++ ++++|+| +| +.++++.. ++|+++||+. ++.. ++--|+-
T Consensus 192 ------~------~l~~~~~~ADIvI~AvG~~~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDvd 243 (284)
T PRK14170 192 ------K------DLPQVAKEADILVVATGLAKFVKKDYI---KPGAIVIDVG-MDRDENNKLCGDVD 243 (284)
T ss_pred ------C------CHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-CcccCCCCeecccc
Confidence 0 1222 3566666 33 34777766 8999999998 6652 3445554
No 291
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.43 E-value=0.45 Score=49.25 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=35.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~---~~~~~~l~~~~~ 508 (639)
.+.++++|+++++-||+++|+.|+++|.+|.+ |+ +++.++++++++
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~ 60 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG 60 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC
Confidence 36789999972137999999999999999988 44 356666766653
No 292
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.43 E-value=0.59 Score=47.51 Aligned_cols=32 Identities=13% Similarity=0.282 Sum_probs=27.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~ 37 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFF 37 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence 46899999994337999999999999999987
No 293
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.42 E-value=0.43 Score=49.22 Aligned_cols=43 Identities=16% Similarity=0.292 Sum_probs=32.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~ 506 (639)
+.++++|++++.-||+|+|+.|+++|.+|.+ |+. +..++++.+
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~ 54 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ 54 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhc
Confidence 5789999984236999999999999999988 542 344444443
No 294
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=90.40 E-value=0.91 Score=46.37 Aligned_cols=147 Identities=19% Similarity=0.146 Sum_probs=84.1
Q ss_pred EEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEEEc----CcC-C
Q 006607 467 LLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVG----DDL-T 536 (639)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwivg----~~~-~ 536 (639)
..+|.|| .||.++|+.|.+.|..|.+ |.++.++...+++... +...+.+ + +.++|+++= ++. .
T Consensus 4 ~~i~GtG--niG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~-----i~~~~~~dA~~~aDVVvLAVP~~a~~~v 76 (211)
T COG2085 4 IAIIGTG--NIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL-----ITGGSNEDAAALADVVVLAVPFEAIPDV 76 (211)
T ss_pred EEEeccC--hHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc-----cccCChHHHHhcCCEEEEeccHHHHHhH
Confidence 4566677 9999999999999999999 6677777777775544 2233433 4 677776621 111 1
Q ss_pred hhhhhcCCCCceeecccccCCc-CCCCCceee---cCCcc-----ccCCCCccccccccccCcchhhh--HHHHHHHHHh
Q 006607 537 GKEQARAPKGTIFIPYTQIPPR-KLRKDCFYH---STPAM-----IIPPSLSNMHSCENWLGRRVMSA--WRIAGIIHAL 605 (639)
Q Consensus 537 ~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~---~~~a~-----~~P~~~~~~~~~e~~~pr~~~~A--c~a~~~v~al 605 (639)
.+|.+.+-.|.+++|.. +|-. ..++--+|. ++.+. .+|++ |++.| --.++.+..+
T Consensus 77 ~~~l~~~~~~KIvID~t-np~~~~~~~~~~~~~~~~~saae~va~~lp~a-------------kVVkAFn~i~a~~l~~~ 142 (211)
T COG2085 77 LAELRDALGGKIVIDAT-NPIEVNGEPGDLYLVPSEGSAAEIVAKLLPGA-------------KVVKAFNTIPAAVLADL 142 (211)
T ss_pred HHHHHHHhCCeEEEecC-CCccccCCccccccCCCCCcHHHHHHHHCCCc-------------chhhhhcccCHHHhccC
Confidence 34454445688888887 5532 344333332 22221 24443 23333 0112222222
Q ss_pred cCCCCCc-----cchhhhhHHHHHHHHHhcCCccC
Q 006607 606 EGWDLNE-----CGQTMCDIHQVWHASLRHGFRPL 635 (639)
Q Consensus 606 Egw~~~e-----~G~iv~~i~~iw~aa~kHGF~p~ 635 (639)
..-. .. ||+-.+-..++-+++.+-||+|+
T Consensus 143 ~~~~-~~~~v~vagDD~~Ak~~v~~L~~~iG~~~l 176 (211)
T COG2085 143 AKPG-GRRDVLVAGDDAEAKAVVAELAEDIGFRPL 176 (211)
T ss_pred CCcC-CceeEEEecCcHHHHHHHHHHHHhcCccee
Confidence 2221 11 33324567889999999999994
No 295
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.35 E-value=0.54 Score=50.08 Aligned_cols=146 Identities=21% Similarity=0.234 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeec-CCCCccee----------eecCC--
Q 006607 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLKIK----------VVDGS-- 448 (639)
Q Consensus 394 ~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~ir----------vv~Gn-- 448 (639)
+-+.-++.-++.|++.|++..- |. +++.++++|.|- ++.++. -|++++.+ =|||=
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~ 123 (286)
T PRK14184 44 ASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHP 123 (286)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCH
Confidence 3444566677889999988754 33 333446788874 333331 13334421 13332
Q ss_pred --------------hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEe-cchhhHHHHH
Q 006607 449 --------------SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT-ICKDDYEKLK 504 (639)
Q Consensus 449 --------------sltaa~v~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~~-~~~~~~~~l~ 504 (639)
.-|++.|++= |+-.-++|+++|... -||+-+|..|.+ +|-.|++ .++. .
T Consensus 124 ~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~AtVt~~hs~t--~--- 196 (286)
T PRK14184 124 ENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSN--IVGKPLALMLGAPGKFANATVTVCHSRT--P--- 196 (286)
T ss_pred hhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhCCcccCCCEEEEEeCCc--h---
Confidence 2466666654 344678999999997 999999999998 8888888 2111 0
Q ss_pred hhCCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc--CCCCCce
Q 006607 505 LRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF 565 (639)
Q Consensus 505 ~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~ 565 (639)
++++ ++++++| +| +.++++.. ++|++++|+. +++. ++--|+-
T Consensus 197 ---------------~l~~~~~~ADIVI~AvG~p~li~~~~v---k~GavVIDVG-i~~~~~~l~GDVd 246 (286)
T PRK14184 197 ---------------DLAEECREADFLFVAIGRPRFVTADMV---KPGAVVVDVG-INRTDDGLVGDCD 246 (286)
T ss_pred ---------------hHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-eeccCCCccCCcc
Confidence 1221 3566666 33 34677666 9999999999 7663 4445554
No 296
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=90.35 E-value=0.57 Score=53.17 Aligned_cols=61 Identities=26% Similarity=0.382 Sum_probs=45.9
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
|||.....+.--+..+...+.|+++|+ | .+|++++..|.+.|.++.+ |+.++.+++.++.+
T Consensus 314 TD~~G~~~~l~~~~~~~~~k~vlIiGa-G--giG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~ 376 (477)
T PRK09310 314 TDGEGLFSLLKQKNIPLNNQHVAIVGA-G--GAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ 376 (477)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 566655555433334445678999996 6 8999999999999999888 78888888877643
No 297
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.30 E-value=0.42 Score=48.58 Aligned_cols=43 Identities=16% Similarity=0.201 Sum_probs=31.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
.+.|+++|+++++-||+++|+.|+++|.+|.+ |+ ++.++..++
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~ 51 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQK 51 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHh
Confidence 36789999982117999999999999999998 65 344433333
No 298
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.27 E-value=0.55 Score=47.46 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=27.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++|.+-||+++|+.|.++|.+|.+
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~ 36 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFF 36 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEE
Confidence 36799999994236999999999999999998
No 299
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.16 E-value=0.97 Score=48.19 Aligned_cols=149 Identities=22% Similarity=0.265 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeec-CCCCcce----------eeecCCh
Q 006607 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gns 449 (639)
++-+.-+....+.|++.|++.. -|. +++..+++|.|- ++.++. -|++++. +=|||=|
T Consensus 43 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~ 122 (285)
T PRK14191 43 PASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFH 122 (285)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 3445556667778889998764 444 233347788774 333331 1232431 2244443
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++. ++|++.
T Consensus 123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~--~VG~Pla~lL~~~gAtVtv~hs~t--~~l~~~- 197 (285)
T PRK14191 123 PLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASN--IVGKPLAMLMLNAGASVSVCHILT--KDLSFY- 197 (285)
T ss_pred hhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCEEEEEeCCc--HHHHHH-
Confidence 4666666544 44678999999997 9999999999999999999 2111 111110
Q ss_pred CcccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006607 508 PVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 565 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 565 (639)
+ +.++++| +| +.++++.. ++|++++|+. +++. ++--|+-
T Consensus 198 -----------~----~~ADIvV~AvG~p~~i~~~~v---k~GavVIDvG-i~~~~~gklvGDvd 243 (285)
T PRK14191 198 -----------T----QNADIVCVGVGKPDLIKASMV---KKGAVVVDIG-INRLNDGRLVGDVD 243 (285)
T ss_pred -----------H----HhCCEEEEecCCCCcCCHHHc---CCCcEEEEee-cccccCCceecccc
Confidence 0 2455655 33 34666655 9999999998 6542 4445554
No 300
>PRK07577 short chain dehydrogenase; Provisional
Probab=90.15 E-value=0.32 Score=48.11 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=29.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (639)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.+
T Consensus 4 k~vlItG~s~--~iG~~ia~~l~~~G~~v~~~~r~~~ 38 (234)
T PRK07577 4 RTVLVTGATK--GIGLALSLRLANLGHQVIGIARSAI 38 (234)
T ss_pred CEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5799999998 9999999999999999988 5443
No 301
>PRK07856 short chain dehydrogenase; Provisional
Probab=90.13 E-value=0.34 Score=48.83 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=30.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++
T Consensus 6 ~k~~lItGas~--gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 6 GRVVLVTGGTR--GIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 57899999998 9999999999999999998 65544
No 302
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=90.11 E-value=0.39 Score=48.61 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=28.8
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
...+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 8 l~~k~~lItG~~~--gIG~a~a~~l~~~G~~vv~ 39 (253)
T PRK08993 8 LEGKVAVVTGCDT--GLGQGMALGLAEAGCDIVG 39 (253)
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 3456899999998 9999999999999999987
No 303
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.09 E-value=0.48 Score=49.22 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=35.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~~~ 508 (639)
.+.|+++|+++++-||+|+|+.|+++|.+|.+ |++ ++.+++.++++
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~ 55 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG 55 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence 36889999972137999999999999999998 653 45666655543
No 304
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=90.03 E-value=0.36 Score=51.20 Aligned_cols=64 Identities=13% Similarity=0.154 Sum_probs=43.8
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc---cceeEEE--EcCcCChh
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWL--VGDDLTGK 538 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~---~~~~vwi--vg~~~~~~ 538 (639)
|+++|+|| -||++++..|++.|-+|++ |+..+-+.. +....+ + ...+.. .++|+|| +|+.|-.+
T Consensus 1 IliTGgTG--lIG~~L~~~L~~~gh~v~iltR~~~~~~~~---~~~~v~-~---~~~~~~~~~~~~DavINLAG~~I~~r 71 (297)
T COG1090 1 ILITGGTG--LIGRALTARLRKGGHQVTILTRRPPKASQN---LHPNVT-L---WEGLADALTLGIDAVINLAGEPIAER 71 (297)
T ss_pred CeEecccc--chhHHHHHHHHhCCCeEEEEEcCCcchhhh---cCcccc-c---cchhhhcccCCCCEEEECCCCccccc
Confidence 57999999 9999999999999999999 666555422 111110 1 222321 3577877 88888766
No 305
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.02 E-value=0.46 Score=50.54 Aligned_cols=160 Identities=18% Similarity=0.237 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006607 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (639)
Q Consensus 394 ~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 442 (639)
+-+.-+...++.|++.|++..- |. +++.++++|.|- ++.++.= |++++.
T Consensus 43 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~ 122 (282)
T PRK14182 43 ASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHP 122 (282)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCH
Confidence 4445566777889999998754 32 333346788875 4333321 233441
Q ss_pred ----eeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607 443 ----KVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 443 ----rvv~Gn-----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
|+..|+ .-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 123 ~n~g~l~~g~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~AtVtichs~T--------- 191 (282)
T PRK14182 123 FNVGALSIGIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSN--IVGKPMAMMLLERHATVTIAHSRT--------- 191 (282)
T ss_pred hHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC---------
Confidence 222232 23666666544 44688999999997 9999999999999999999 2111
Q ss_pred Ccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCCc---CCCCCceeec-----CCccc
Q 006607 508 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMI 573 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~ 573 (639)
.+ +++ +++||+| +|+ -++++.. ++|++++|+. +... ++.-|+-+.+ .....
T Consensus 192 -----~n------l~~~~~~ADIvI~AvGk~~~i~~~~i---k~gaiVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTP 256 (282)
T PRK14182 192 -----AD------LAGEVGRADILVAAIGKAELVKGAWV---KEGAVVIDVG-MNRLADGKLVGDVEFAAAAARASAITP 256 (282)
T ss_pred -----CC------HHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEee-ceecCCCCeeCCCCHHHHHhhccEecC
Confidence 11 221 3566666 342 4666665 9999999998 6652 4446654322 22244
Q ss_pred cCCCCc
Q 006607 574 IPPSLS 579 (639)
Q Consensus 574 ~P~~~~ 579 (639)
||+.+-
T Consensus 257 VPGGVG 262 (282)
T PRK14182 257 VPGGVG 262 (282)
T ss_pred CCCCCh
Confidence 666544
No 306
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.98 E-value=0.51 Score=50.21 Aligned_cols=150 Identities=20% Similarity=0.234 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006607 393 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 442 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 442 (639)
.+-+.-+..-++.|++.|++.--. . +++.++++|.|- ++.+..= |++++.
T Consensus 43 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~ 122 (282)
T PRK14180 43 PASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFH 122 (282)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccC
Confidence 344455666677788888876543 3 233346788774 3333311 222331
Q ss_pred -----eeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006607 443 -----KVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (639)
Q Consensus 443 -----rvv~Gn-----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (639)
|+..|+ .-|+.+|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++- ..|++.
T Consensus 123 ~~n~g~l~~g~~~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~ATVt~chs~T--~dl~~~ 198 (282)
T PRK14180 123 PTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRFT--TDLKSH 198 (282)
T ss_pred hhhHHHHhcCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEEcCCC--CCHHHH
Confidence 223342 34666666544 44688999999998 9999999999999999999 2111 111111
Q ss_pred CCcccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc--CCCCCcee
Q 006607 507 IPVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY 566 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y 566 (639)
+ ++++|+| +| +.++++.. ++|++++|+. ++.. ++.-|+-+
T Consensus 199 ------------~----k~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~~~gkl~GDvd~ 244 (282)
T PRK14180 199 ------------T----TKADILIVAVGKPNFITADMV---KEGAVVIDVG-INHVDGKIVGDVDF 244 (282)
T ss_pred ------------h----hhcCEEEEccCCcCcCCHHHc---CCCcEEEEec-ccccCCceeCCcCH
Confidence 1 3566666 34 34677666 9999999998 6652 55566653
No 307
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=89.91 E-value=0.69 Score=48.57 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=34.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
++|.++|+- .+|+++|..|++.|.+|++ +++++.++.++
T Consensus 5 ~kI~vIGaG---~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 5 KKVGVIGAG---QMGNGIAHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred CEEEEECCc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 579999996 9999999999999999999 88888877554
No 308
>PRK06940 short chain dehydrogenase; Provisional
Probab=89.91 E-value=0.62 Score=48.13 Aligned_cols=41 Identities=20% Similarity=0.261 Sum_probs=33.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
+.++++|+ | -||+++|+.|+ +|.+|.+ |+.++.+++.+++.
T Consensus 3 k~~lItGa-~--gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~ 45 (275)
T PRK06940 3 EVVVVIGA-G--GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLR 45 (275)
T ss_pred CEEEEECC-C--hHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHH
Confidence 46788887 5 79999999997 7999998 88888877776653
No 309
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=89.88 E-value=0.48 Score=51.64 Aligned_cols=85 Identities=16% Similarity=0.221 Sum_probs=51.4
Q ss_pred EEEecccCchhhHHHHHHHHhccC-c-EEEe--cchhhHHHHHhhCCccc-ccceeeecc---ccc--cceeEEE--EcC
Q 006607 466 VLLRGTVTANKVANAVASSLCQMG-I-KVAT--ICKDDYEKLKLRIPVEA-QHNLVLSTS---YAA--HKTKIWL--VGD 533 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~-~-~v~~--~~~~~~~~l~~~~~~~~-~~~l~~~~~---~~~--~~~~vwi--vg~ 533 (639)
|++.|+ | .+|+++|+.|.+++ . +|++ ||.++.+++.+++.... +..-+.+++ +++ +.++++| +|.
T Consensus 1 IlvlG~-G--~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-G--RVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---S--HHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred CEEEcC-c--HHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence 689999 9 99999999999776 4 7888 99999999988742222 111123443 333 7778877 554
Q ss_pred cCChhhhh-cCCCCceeeccc
Q 006607 534 DLTGKEQA-RAPKGTIFIPYT 553 (639)
Q Consensus 534 ~~~~~~q~-~a~~G~~f~~~~ 553 (639)
...+.=.+ =+..|++++|.+
T Consensus 78 ~~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 78 FFGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp GGHHHHHHHHHHHT-EEEESS
T ss_pred chhHHHHHHHHHhCCCeeccc
Confidence 42222111 124588888865
No 310
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.80 E-value=0.46 Score=50.49 Aligned_cols=147 Identities=23% Similarity=0.262 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeec-CCCCcc----------eeeecCCh
Q 006607 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLK----------IKVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~----------irvv~Gns 449 (639)
++-+.-+..-.+.|++.|+++.- |. +++..+++|.|. ++.++. -|++++ .+=|||=+
T Consensus 42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~ 121 (282)
T PRK14169 42 PASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFS 121 (282)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCC
Confidence 34455566667788899987654 43 233346788864 333331 123232 12245543
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|+..|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++-
T Consensus 122 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVtichs~T--------- 190 (282)
T PRK14169 122 PVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSN--IVGRPLAGLMVNHDATVTIAHSKT--------- 190 (282)
T ss_pred hhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEECCCC---------
Confidence 3666666544 44678999999997 9999999999999999998 1111
Q ss_pred Ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006607 508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 565 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 565 (639)
. ++++ ++++|+| +| +.++++.. ++|+++||+. +.+. ++.-||-
T Consensus 191 -----~------~l~~~~~~ADIvI~AvG~p~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd 242 (282)
T PRK14169 191 -----R------NLKQLTKEADILVVAVGVPHFIGADAV---KPGAVVIDVG-ISRGADGKLLGDVD 242 (282)
T ss_pred -----C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCcEEEEee-ccccCCCCeeecCc
Confidence 0 1221 3566666 33 35777766 9999999998 6652 4445655
No 311
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.71 E-value=0.54 Score=49.98 Aligned_cols=161 Identities=17% Similarity=0.239 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeec-CCCCcce-----------------
Q 006607 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------------- 442 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------------- 442 (639)
.+-+.-+..-.+.|++.|++..- |. +++.+++||.|- ++.++. -|++++.
T Consensus 42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~ 121 (282)
T PRK14166 42 PASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFH 121 (282)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 34455566667788999988543 43 233346788874 333331 1222331
Q ss_pred -----eeecC-C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006607 443 -----KVVDG-S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (639)
Q Consensus 443 -----rvv~G-n----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (639)
|+..| + .-|+++|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ .++-
T Consensus 122 ~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVt~chs~T-------- 191 (282)
T PRK14166 122 PINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIKT-------- 191 (282)
T ss_pred hhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence 22334 1 34666666544 34678999999997 9999999999999999998 2111
Q ss_pred CCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCceeec-----CCcc
Q 006607 507 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAM 572 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~ 572 (639)
. ++++ ++++|+| +| +.++++.. ++|++++|+. +.+. ++--||-+.+ ....
T Consensus 192 ------~------nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iT 255 (282)
T PRK14166 192 ------K------DLSLYTRQADLIIVAAGCVNLLRSDMV---KEGVIVVDVG-INRLESGKIVGDVDFEEVSKKSSYIT 255 (282)
T ss_pred ------C------CHHHHHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEec-ccccCCCCeeCCCCHHHHHhhccEec
Confidence 1 1221 3566766 33 34777766 9999999998 6652 4446665332 1124
Q ss_pred ccCCCCc
Q 006607 573 IIPPSLS 579 (639)
Q Consensus 573 ~~P~~~~ 579 (639)
.||+.+-
T Consensus 256 PVPGGVG 262 (282)
T PRK14166 256 PVPGGVG 262 (282)
T ss_pred CCCCCch
Confidence 4666544
No 312
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.66 E-value=0.58 Score=47.76 Aligned_cols=46 Identities=17% Similarity=0.234 Sum_probs=34.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI 507 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~---~~~~l~~~~ 507 (639)
..+.|+++|+++++-||+++|+.|+++|.+|.+ |+++ +.+++++++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~ 59 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL 59 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh
Confidence 457899999983126999999999999999988 5543 345555554
No 313
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.64 E-value=0.76 Score=49.01 Aligned_cols=139 Identities=20% Similarity=0.232 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh--
Q 006607 395 INSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS-- 449 (639)
Q Consensus 395 in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns-- 449 (639)
-+.-+..-.+.|++.|++.- -|. +++..++||.|- ++.++.= |++++. +=|||=+
T Consensus 52 S~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~ 131 (287)
T PRK14176 52 SKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPY 131 (287)
T ss_pred hHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChh
Confidence 34445566677888888653 443 344456777764 3333311 222331 1234433
Q ss_pred --------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCc
Q 006607 450 --------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV 509 (639)
Q Consensus 450 --------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~ 509 (639)
-|++.|++-+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++ ..+|++.
T Consensus 132 N~g~l~~g~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVtv~hs~--T~~l~~~--- 204 (287)
T PRK14176 132 NMGKLMIGDEGLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSN--VVGKPMAAMLLNRNATVSVCHVF--TDDLKKY--- 204 (287)
T ss_pred hhhhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCEEEEEecc--CCCHHHH---
Confidence 3666666544 34678999999996 8999999999999999999 211 0111111
Q ss_pred ccccceeeeccccccceeEEEE--cC--cCChhhhhcCCCCceeecccccCC
Q 006607 510 EAQHNLVLSTSYAAHKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 510 ~~~~~l~~~~~~~~~~~~vwiv--g~--~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
+ ++++++|+ |+ .++++ +.++|++++|+. +..
T Consensus 205 ---------~----~~ADIvv~AvG~p~~i~~~---~vk~gavVIDvG-in~ 239 (287)
T PRK14176 205 ---------T----LDADILVVATGVKHLIKAD---MVKEGAVIFDVG-ITK 239 (287)
T ss_pred ---------H----hhCCEEEEccCCccccCHH---HcCCCcEEEEec-ccc
Confidence 0 35566553 43 45555 459999999998 554
No 314
>PRK08655 prephenate dehydrogenase; Provisional
Probab=89.61 E-value=0.82 Score=51.33 Aligned_cols=83 Identities=16% Similarity=0.212 Sum_probs=54.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEEEcCcCCh---
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGDDLTG--- 537 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwivg~~~~~--- 537 (639)
+|.++|++| .+|+++|+.|.+.|.+|.+ |++++.+++..+.+... .++.+ . .+++++|+--..+.
T Consensus 2 kI~IIGG~G--~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~------~~~~~e~~~~aDvVIlavp~~~~~~ 73 (437)
T PRK08655 2 KISIIGGTG--GLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY------ANDNIDAAKDADIVIISVPINVTED 73 (437)
T ss_pred EEEEEecCC--HHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee------ccCHHHHhccCCEEEEecCHHHHHH
Confidence 588999998 9999999999999999888 77777666655543221 22333 2 56666553211111
Q ss_pred --hh-hhcCCCCceeeccccc
Q 006607 538 --KE-QARAPKGTIFIPYTQI 555 (639)
Q Consensus 538 --~~-q~~a~~G~~f~~~~~~ 555 (639)
++ ...+++|+++++++-+
T Consensus 74 vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 74 VIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred HHHHHHhhCCCCCEEEEcccc
Confidence 12 2235789999999853
No 315
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.59 E-value=0.48 Score=50.48 Aligned_cols=139 Identities=24% Similarity=0.283 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 006607 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns 449 (639)
.+-+.-+..-++.|++.|+++.- |- +++..++||.|. ++.++.= |++++ .+=|||=+
T Consensus 41 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~ 120 (287)
T PRK14173 41 PASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFH 120 (287)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccC
Confidence 34455566777889999988754 33 233346788874 4344421 33233 12245543
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|+.+|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 121 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVtichs~T--------- 189 (287)
T PRK14173 121 PLNVGRLWMGGEALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSN--IVGKPLAALLLREDATVTLAHSKT--------- 189 (287)
T ss_pred hhhhHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEeCCCC---------
Confidence 3666666644 33678999999998 9999999999999999998 2111
Q ss_pred Ccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCC
Q 006607 508 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
.+ +++ ++++|+| +|+ -++++.. ++|+++||+. +++
T Consensus 190 -----~~------l~~~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDVG-in~ 230 (287)
T PRK14173 190 -----QD------LPAVTRRADVLVVAVGRPHLITPEMV---RPGAVVVDVG-INR 230 (287)
T ss_pred -----CC------HHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-Ccc
Confidence 01 221 3556655 443 4666666 9999999998 554
No 316
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=89.59 E-value=0.6 Score=49.08 Aligned_cols=92 Identities=12% Similarity=0.055 Sum_probs=56.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC-------------ccc---ccceeeec-cccc-
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEA---QHNLVLST-SYAA- 523 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-------------~~~---~~~l~~~~-~~~~- 523 (639)
++|.++|+- .+|+++|..|++.|.+|.+ +++++.++.++++. .+. .......+ ++++
T Consensus 5 ~~V~vIG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (295)
T PLN02545 5 KKVGVVGAG---QMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEEL 81 (295)
T ss_pred CEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHh
Confidence 569999986 9999999999999999999 77777764333211 100 00111222 3444
Q ss_pred cceeEEEE--cCcCChhh------hhcCCCCceee-cccccCCc
Q 006607 524 HKTKIWLV--GDDLTGKE------QARAPKGTIFI-PYTQIPPR 558 (639)
Q Consensus 524 ~~~~vwiv--g~~~~~~~------q~~a~~G~~f~-~~~~~~~~ 558 (639)
++++++|. -+..+-++ ...++++++++ ..|-+++.
T Consensus 82 ~~aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~i~~~ 125 (295)
T PLN02545 82 RDADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSISIT 125 (295)
T ss_pred CCCCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 77877663 11111111 12478898886 66667665
No 317
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=89.46 E-value=1.2 Score=49.21 Aligned_cols=125 Identities=14% Similarity=0.142 Sum_probs=78.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc--c---------cccceeeecccc-c-cceeEE
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--E---------AQHNLVLSTSYA-A-HKTKIW 529 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~--~---------~~~~l~~~~~~~-~-~~~~vw 529 (639)
+|.++|.. -+|..+|..|++ |.+|+. +++++.+++++.... | ....+...++.. + ++++++
T Consensus 2 kI~VIGlG---yvGl~~A~~lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v 77 (388)
T PRK15057 2 KITISGTG---YVGLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV 77 (388)
T ss_pred EEEEECCC---HHHHHHHHHHHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence 47888877 999999987775 999999 899999999885322 1 111111122233 2 667665
Q ss_pred E--EcCcCChh--------------hhhcCCCCceeecccccCCc---CCCCCc---eeecCCccccCCCCccccccccc
Q 006607 530 L--VGDDLTGK--------------EQARAPKGTIFIPYTQIPPR---KLRKDC---FYHSTPAMIIPPSLSNMHSCENW 587 (639)
Q Consensus 530 i--vg~~~~~~--------------~q~~a~~G~~f~~~~~~~~~---~~R~dc---~y~~~~a~~~P~~~~~~~~~e~~ 587 (639)
| |++.++.+ +..++++|.+++.-|-+||. ++++.. -...+|....|++.- -++-
T Consensus 78 ii~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l~~~~~~~~v~~~PE~l~~G~a~----~d~~ 153 (388)
T PRK15057 78 IIATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKAL----YDNL 153 (388)
T ss_pred EEeCCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHHHHHhhcCcEEECcccccCCccc----cccc
Confidence 4 66554432 22345899999999999998 332222 133366666666532 2355
Q ss_pred cCcchhhhHH
Q 006607 588 LGRRVMSAWR 597 (639)
Q Consensus 588 ~pr~~~~Ac~ 597 (639)
-|+|+|..|-
T Consensus 154 ~p~rvv~G~~ 163 (388)
T PRK15057 154 HPSRIVIGER 163 (388)
T ss_pred CCCEEEEEcC
Confidence 6888877643
No 318
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=89.40 E-value=0.6 Score=46.00 Aligned_cols=40 Identities=23% Similarity=0.327 Sum_probs=31.3
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~ 507 (639)
|+++|++| -||+.+|+.|+++|.+|.+ |+. ++.+.+++++
T Consensus 1 vlItG~~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 43 (239)
T TIGR01830 1 ALVTGASR--GIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL 43 (239)
T ss_pred CEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 57899998 9999999999999999888 443 4555554443
No 319
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=89.38 E-value=0.39 Score=52.04 Aligned_cols=67 Identities=18% Similarity=0.210 Sum_probs=54.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec-cccc--cceeEEE
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL 530 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwi 530 (639)
-.....+.|||| =.|.-||++||++|.+-.| ||.++++.|.+++..+.+..=+.+- .+++ ...||++
T Consensus 5 ~e~d~iiYGAtG--y~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVl 76 (382)
T COG3268 5 REYDIIIYGATG--YAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVL 76 (382)
T ss_pred cceeEEEEcccc--chhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEE
Confidence 345788999999 9999999999999999988 9999999999999998876533222 2444 5557877
No 320
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=89.27 E-value=0.63 Score=49.67 Aligned_cols=36 Identities=17% Similarity=0.138 Sum_probs=30.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~ 501 (639)
++|+++|++| =||+++|+.|.++|.+|+. |+++...
T Consensus 5 k~ilItGatG--~IG~~l~~~L~~~G~~V~~~~r~~~~~~ 42 (349)
T TIGR02622 5 KKVLVTGHTG--FKGSWLSLWLLELGAEVYGYSLDPPTSP 42 (349)
T ss_pred CEEEEECCCC--hhHHHHHHHHHHCCCEEEEEeCCCccch
Confidence 6799999999 9999999999999999987 5554433
No 321
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=89.25 E-value=1.1 Score=49.31 Aligned_cols=170 Identities=16% Similarity=0.119 Sum_probs=111.2
Q ss_pred eeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeec
Q 006607 442 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLST 519 (639)
Q Consensus 442 irvv~Gnsltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~ 519 (639)
-|-=||.|+.-++ .+.+- -.-+.|+|+|=- .+||-||..|.-.|-+|.+..-|....|+.. ..++ ++.
T Consensus 187 NrYGtgqS~~DgI-~RaTn~liaGK~vVV~GYG---~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~-MdGf-----~V~ 256 (420)
T COG0499 187 NRYGTGQSLLDGI-LRATNVLLAGKNVVVAGYG---WVGRGIAMRLRGMGARVIVTEVDPIRALEAA-MDGF-----RVM 256 (420)
T ss_pred cccccchhHHHHH-HhhhceeecCceEEEeccc---ccchHHHHHhhcCCCeEEEEecCchHHHHHh-hcCc-----EEE
Confidence 3444555554332 22222 245677777765 9999999999999999999666666666554 2332 355
Q ss_pred ccc-c-cceeEEE----EcCcCChhhhhcCCCCceeecccccCCc--------------CCCCCceeecCCc---cc--c
Q 006607 520 SYA-A-HKTKIWL----VGDDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---MI--I 574 (639)
Q Consensus 520 ~~~-~-~~~~vwi----vg~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~~--~ 574 (639)
+.+ + ...+|.| .-+.|+.|+.++|+.|++.|-.-.|+-+ +.|+.+.-.+.|. +. -
T Consensus 257 ~m~~Aa~~gDifiT~TGnkdVi~~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~lla 336 (420)
T COG0499 257 TMEEAAKTGDIFVTATGNKDVIRKEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLA 336 (420)
T ss_pred EhHHhhhcCCEEEEccCCcCccCHHHHHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEe
Confidence 554 3 5557877 4578999999999999999877653322 3333333222221 11 1
Q ss_pred CCCCccccccccccCcchhhhHHHHHHHHHhcCCCCC---ccch--hhhhHHH
Q 006607 575 PPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLN---ECGQ--TMCDIHQ 622 (639)
Q Consensus 575 P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~---e~G~--iv~~i~~ 622 (639)
-+-+-|+. |--+.|..+|+..+|--.+.+.|=|..+ |-|= +...+|+
T Consensus 337 eGRLvNLa-~a~GHPs~VMd~SFanQaLa~~~L~~n~~~~~~~Vy~lP~~lD~ 388 (420)
T COG0499 337 EGRLVNLA-AATGHPSEVMDMSFANQALAQIYLVKNHGKLEPGVYRLPKELDE 388 (420)
T ss_pred cceeeeec-cCCCCcHHHhhhhHHHHHHHHHHHHhcccccCCceeeCcHHHHH
Confidence 22367787 8899999999999999999888888766 4453 2355554
No 322
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=89.20 E-value=1.2 Score=49.76 Aligned_cols=101 Identities=17% Similarity=0.123 Sum_probs=67.6
Q ss_pred eeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceee
Q 006607 442 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 517 (639)
Q Consensus 442 irvv~Gnsltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~ 517 (639)
-|.=+|.|.. -.+++.+. ...++|+|+|+- .||+.+|+.+...|.+|++ +++.|.+.-++ .+..
T Consensus 180 n~~g~g~s~~-~~i~r~t~~~l~GktVvViG~G---~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~------- 247 (413)
T cd00401 180 NLYGCRESLI-DGIKRATDVMIAGKVAVVAGYG---DVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYE------- 247 (413)
T ss_pred ccchhchhhH-HHHHHhcCCCCCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCE-------
Confidence 4555777753 44444443 356789999998 9999999999999999998 66677664433 2221
Q ss_pred eccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccc
Q 006607 518 STSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 518 ~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
..+.++ +.++++| .| ..++.+....+++|.+++-+..
T Consensus 248 ~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~ 290 (413)
T cd00401 248 VMTMEEAVKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGH 290 (413)
T ss_pred EccHHHHHcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCC
Confidence 112222 4567766 33 3455566888999999987775
No 323
>PRK06523 short chain dehydrogenase; Provisional
Probab=89.20 E-value=0.43 Score=48.17 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=30.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+++
T Consensus 8 ~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 8 AGKRALVTGGTK--GIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCCEEEEECCCC--chhHHHHHHHHHCCCEEEEEeCChh
Confidence 347899999998 9999999999999999988 5543
No 324
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=89.17 E-value=1 Score=48.15 Aligned_cols=92 Identities=13% Similarity=0.097 Sum_probs=59.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc-----cc--ccceeeeccccc--cceeEEE--
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-----EA--QHNLVLSTSYAA--HKTKIWL-- 530 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~-----~~--~~~l~~~~~~~~--~~~~vwi-- 530 (639)
.+|.+.|+- .+|.++|..|++.|.+|++ |++++.+.+++.-.. +. ..+....++.++ ++++++|
T Consensus 5 m~I~iIG~G---~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 5 MRVAVLGAG---AWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA 81 (328)
T ss_pred CeEEEECcC---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence 468999986 9999999999999999999 888888888764211 10 011112224543 5666655
Q ss_pred EcCcCChhhhhcCCCCceeecccc-cCCc
Q 006607 531 VGDDLTGKEQARAPKGTIFIPYTQ-IPPR 558 (639)
Q Consensus 531 vg~~~~~~~q~~a~~G~~f~~~~~-~~~~ 558 (639)
+-..-..+-...+++|+.++.++. +.+.
T Consensus 82 v~~~~~~~v~~~l~~~~~vi~~~~Gi~~~ 110 (328)
T PRK14618 82 VPSKALRETLAGLPRALGYVSCAKGLAPD 110 (328)
T ss_pred CchHHHHHHHHhcCcCCEEEEEeeccccC
Confidence 222222333355688999999887 6654
No 325
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=89.09 E-value=0.55 Score=52.29 Aligned_cols=38 Identities=24% Similarity=0.263 Sum_probs=32.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
.+.|+++||+| -||+++|+.|+++|.+|.. |++++.++
T Consensus 178 gK~VLITGASg--GIG~aLA~~La~~G~~Vi~l~r~~~~l~~ 217 (406)
T PRK07424 178 GKTVAVTGASG--TLGQALLKELHQQGAKVVALTSNSDKITL 217 (406)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46899999998 9999999999999999987 66666543
No 326
>PLN02778 3,5-epimerase/4-reductase
Probab=88.99 E-value=0.57 Score=49.39 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=31.2
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
++.|+ .+.+|+++|++| =||+.+++.|.++|.+|+.
T Consensus 2 ~~~~~~~~~kiLVtG~tG--fiG~~l~~~L~~~g~~V~~ 38 (298)
T PLN02778 2 NGTAGSATLKFLIYGKTG--WIGGLLGKLCQEQGIDFHY 38 (298)
T ss_pred CCCCCCCCCeEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 45666 356899999999 9999999999999999975
No 327
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=88.99 E-value=1 Score=44.61 Aligned_cols=29 Identities=24% Similarity=0.366 Sum_probs=27.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 k~vlItG~s~--~iG~~la~~l~~~g~~vi~ 31 (245)
T PRK12824 3 KIALVTGAKR--GIGSAIARELLNDGYRVIA 31 (245)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHcCCEEEE
Confidence 5789999998 9999999999999999988
No 328
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=88.92 E-value=1.2 Score=43.67 Aligned_cols=79 Identities=13% Similarity=0.186 Sum_probs=46.8
Q ss_pred HHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc
Q 006607 451 AAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 523 (639)
Q Consensus 451 taa~v~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 523 (639)
|+..+++= ++..-++|+++|..+ -||+-++..|.++|-.|++ .+.+.+++ .+
T Consensus 19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~--~VG~Pla~lL~~~~atVt~~h~~T~~l~~---~~---------------- 77 (160)
T PF02882_consen 19 TPLAIIELLEYYGIDLEGKKVVVVGRSN--IVGKPLAMLLLNKGATVTICHSKTKNLQE---IT---------------- 77 (160)
T ss_dssp HHHHHHHHHHHTT-STTT-EEEEE-TTT--TTHHHHHHHHHHTT-EEEEE-TTSSSHHH---HH----------------
T ss_pred CHHHHHHHHHhcCCCCCCCEEEEECCcC--CCChHHHHHHHhCCCeEEeccCCCCcccc---ee----------------
Confidence 55555543 345678999999997 9999999999999999999 21112221 10
Q ss_pred cceeEEEEcCc----CChhhhhcCCCCceeeccc
Q 006607 524 HKTKIWLVGDD----LTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 524 ~~~~vwivg~~----~~~~~q~~a~~G~~f~~~~ 553 (639)
+.+|++|+.-+ ++++ +.++|+++||+.
T Consensus 78 ~~ADIVVsa~G~~~~i~~~---~ik~gavVIDvG 108 (160)
T PF02882_consen 78 RRADIVVSAVGKPNLIKAD---WIKPGAVVIDVG 108 (160)
T ss_dssp TTSSEEEE-SSSTT-B-GG---GS-TTEEEEE--
T ss_pred eeccEEeeeeccccccccc---cccCCcEEEecC
Confidence 35566663322 3333 458899999887
No 329
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=88.91 E-value=2.1 Score=46.62 Aligned_cols=164 Identities=15% Similarity=0.195 Sum_probs=98.2
Q ss_pred HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607 406 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 456 (639)
Q Consensus 406 A~~~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~ 456 (639)
+.++|.+++.|+.= +++|. |.+..-+.+.|+|+ ...++|+.|.+ +=..++.
T Consensus 68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 147 (334)
T PRK01713 68 AYDQGAQVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQSIVNELAEYAGVPVFNGLTDEFHPTQMLADVLTMI 147 (334)
T ss_pred HHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEEcCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 36899999999743 44454 34556677788886 36789998865 1246666
Q ss_pred hcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH------HHHhhCCcccccceeeecccc-c-cce
Q 006607 457 NSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE------KLKLRIPVEAQHNLVLSTSYA-A-HKT 526 (639)
Q Consensus 457 ~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~------~l~~~~~~~~~~~l~~~~~~~-~-~~~ 526 (639)
+... -+..+|.++|... +.+++..+..+++-|.+|.+-.++.|+ +..++...+.+..+...++++ + +++
T Consensus 148 e~~g~~l~gl~ia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~a 226 (334)
T PRK01713 148 ENCDKPLSEISYVYIGDAR-NNMGNSLLLIGAKLGMDVRICAPKALLPEASLVEMCEKFAKESGARITVTDDIDKAVKGV 226 (334)
T ss_pred HHcCCCcCCcEEEEECCCc-cCHHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCC
Confidence 6543 2456999999973 369999999999999999993333332 111222222333312233565 4 788
Q ss_pred eEEEEcCcCChhhhhc--CCCCceeecccccCCc--C-C-CCCcee-ecCCc
Q 006607 527 KIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--K-L-RKDCFY-HSTPA 571 (639)
Q Consensus 527 ~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~--~-~-R~dc~y-~~~~a 571 (639)
+|+..+-|.+-.++.. ...-..|-+|. +..+ + . |+||.+ |.+|+
T Consensus 227 DvVyt~~w~sm~~~~~~~~~~~~~~~~y~-v~~ell~~a~k~~aivmH~lP~ 277 (334)
T PRK01713 227 DFVHTDVWVSMGEPLETWGERIKLLMPYQ-VTPELMKRTGNPKVKFMHCLPA 277 (334)
T ss_pred CEEEEcceeecccchhhHHHHHHhccCCc-CCHHHHhccCCCCCEEECCCCC
Confidence 8877655443211100 00001344554 8877 3 3 578875 77776
No 330
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.75 E-value=0.64 Score=49.58 Aligned_cols=146 Identities=21% Similarity=0.254 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcc-------------------
Q 006607 394 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLK------------------- 441 (639)
Q Consensus 394 ~in~~I~~Ai~~A~~~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~------------------- 441 (639)
+-+.-++.-++.|++.|++..-.= +++..++||.|- ++.++.= |++++
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~ 124 (288)
T PRK14171 45 ASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHP 124 (288)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCc
Confidence 444446666778888888765432 334446778774 3333311 22222
Q ss_pred ---eeeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607 442 ---IKVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 442 ---irvv~Gn-----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
=|+..|+ .-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++-
T Consensus 125 ~N~g~l~~g~~~~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~--iVGkPla~lL~~~~ATVtichs~T--------- 193 (288)
T PRK14171 125 LNVGYLHSGISQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSN--IVGKPLSALLLKENCSVTICHSKT--------- 193 (288)
T ss_pred cchhhhhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC---------
Confidence 1233443 34666666544 34678999999998 9999999999999999998 2111
Q ss_pred Ccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006607 508 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 565 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 565 (639)
.+ +++ ++++|+| +|+ .++++.. ++|+++||+. +... ++.-|+-
T Consensus 194 -----~~------L~~~~~~ADIvV~AvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd 245 (288)
T PRK14171 194 -----HN------LSSITSKADIVVAAIGSPLKLTAEYF---NPESIVIDVG-INRISGNKIIGDVD 245 (288)
T ss_pred -----CC------HHHHHhhCCEEEEccCCCCccCHHHc---CCCCEEEEee-ccccCCCCeECCcc
Confidence 11 222 3566766 443 3666666 9999999998 6663 4446655
No 331
>PRK06398 aldose dehydrogenase; Validated
Probab=88.74 E-value=0.46 Score=48.41 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (639)
.+.|+++|++| -||+++|+.|+++|.+|++ |+++
T Consensus 6 gk~vlItGas~--gIG~~ia~~l~~~G~~Vi~~~r~~~ 41 (258)
T PRK06398 6 DKVAIVTGGSQ--GIGKAVVNRLKEEGSNVINFDIKEP 41 (258)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 36899999998 9999999999999999998 5443
No 332
>PRK08324 short chain dehydrogenase; Validated
Probab=88.72 E-value=0.8 Score=54.02 Aligned_cols=45 Identities=18% Similarity=0.177 Sum_probs=39.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++..
T Consensus 422 gk~vLVTGasg--gIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~ 468 (681)
T PRK08324 422 GKVALVTGAAG--GIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG 468 (681)
T ss_pred CCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc
Confidence 47899999998 9999999999999999988 888888888776544
No 333
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=88.60 E-value=0.95 Score=47.39 Aligned_cols=85 Identities=11% Similarity=0.119 Sum_probs=53.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec-cccc-cceeEEEEcCcCCh---
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA-HKTKIWLVGDDLTG--- 537 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~-~~~~vwivg~~~~~--- 537 (639)
+|.++| .| .+|.++|+.|.++|.+|.. ++++..++++++-... ..+ +.++ ++++++|+--..+.
T Consensus 2 ~I~IIG-~G--~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~------~~~~~~~~~~~aDlVilavp~~~~~~ 72 (279)
T PRK07417 2 KIGIVG-LG--LIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVD------EASTDLSLLKDCDLVILALPIGLLLP 72 (279)
T ss_pred eEEEEe-ec--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcc------cccCCHhHhcCCCEEEEcCCHHHHHH
Confidence 588999 46 9999999999999999988 7777887776541100 121 2333 56777553111100
Q ss_pred --hhh-hcCCCCceeecccccCCc
Q 006607 538 --KEQ-ARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 538 --~~q-~~a~~G~~f~~~~~~~~~ 558 (639)
++. ..+++|+++++++-+++.
T Consensus 73 ~~~~l~~~l~~~~ii~d~~Svk~~ 96 (279)
T PRK07417 73 PSEQLIPALPPEAIVTDVGSVKAP 96 (279)
T ss_pred HHHHHHHhCCCCcEEEeCcchHHH
Confidence 122 234678888887766554
No 334
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=88.53 E-value=0.81 Score=48.50 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=27.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+|+|++| -||+++++.|.++|.+|..
T Consensus 6 ~~~vlVTGatG--fiG~~l~~~L~~~G~~V~~ 35 (340)
T PLN02653 6 RKVALITGITG--QDGSYLTEFLLSKGYEVHG 35 (340)
T ss_pred CCEEEEECCCC--ccHHHHHHHHHHCCCEEEE
Confidence 35799999999 9999999999999999987
No 335
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=88.52 E-value=0.58 Score=46.71 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=27.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|++| .||+++|+.|+++|.++.+
T Consensus 6 ~~~vlitGasg--~iG~~l~~~l~~~g~~v~~ 35 (252)
T PRK06077 6 DKVVVVTGSGR--GIGRAIAVRLAKEGSLVVV 35 (252)
T ss_pred CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEE
Confidence 36899999998 9999999999999999876
No 336
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.47 E-value=1.2 Score=47.62 Aligned_cols=139 Identities=19% Similarity=0.207 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeec-CCCCcc----------eeeecCCh
Q 006607 393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLER-QPNKLK----------IKVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~----------irvv~Gns 449 (639)
.+-+.-++.-++.|++.|++. +-|- +++..+++|.|- ++.++. -|++++ .+=|||=+
T Consensus 45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~ 124 (285)
T PRK10792 45 PASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFH 124 (285)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccC
Confidence 345555667778889999884 4443 233336788774 333331 122232 12234432
Q ss_pred ----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607 450 ----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|++.|++-+. -..++|+++|... -+|+-+|..|.++|-.|++ .++ ..
T Consensus 125 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVG~Pla~lL~~~~atVtv~hs~--T~------ 194 (285)
T PRK10792 125 PYNVGRLAQRIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASN--IVGRPMSLELLLAGCTVTVCHRF--TK------ 194 (285)
T ss_pred hhhHhHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCeEEEEECC--CC------
Confidence 36777766553 3578999999996 8999999999999999999 211 01
Q ss_pred Ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607 508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
++++ +.++++| +| +.++++.. ++|++++|+. +.+
T Consensus 195 ------------~l~~~~~~ADIvi~avG~p~~v~~~~v---k~gavVIDvG-in~ 234 (285)
T PRK10792 195 ------------NLRHHVRNADLLVVAVGKPGFIPGEWI---KPGAIVIDVG-INR 234 (285)
T ss_pred ------------CHHHHHhhCCEEEEcCCCcccccHHHc---CCCcEEEEcc-ccc
Confidence 1221 3556655 32 34666554 9999999998 555
No 337
>PLN00015 protochlorophyllide reductase
Probab=88.36 E-value=0.79 Score=48.26 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=35.1
Q ss_pred EEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCC
Q 006607 467 LLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~ 508 (639)
+++|+++ -||+++|+.|+++| .+|.+ |+.++.+++.+++.
T Consensus 1 lITGas~--GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~ 43 (308)
T PLN00015 1 IITGASS--GLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG 43 (308)
T ss_pred CEeCCCC--hHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc
Confidence 4789997 99999999999999 89888 88888888877764
No 338
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.23 E-value=0.8 Score=49.06 Aligned_cols=139 Identities=18% Similarity=0.206 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 006607 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns 449 (639)
.+-+.-+...++.|++.|++.. -|- +++..+++|.|- ++.++.= |++++ .+=|||=|
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~ 123 (297)
T PRK14186 44 PASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLH 123 (297)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 3455556677788999998875 443 223336677765 4333311 23233 12244433
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|+.+|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++.+
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGkPla~lL~~~~atVtv~hs~T~-------- 193 (297)
T PRK14186 124 PLNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSI--LVGKPLALMLLAANATVTIAHSRTQ-------- 193 (297)
T ss_pred hhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCCC--------
Confidence 3566666544 34578999999997 9999999999999999998 21110
Q ss_pred Ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607 508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
++++ ++++|+| +| +.++++.. ++|+++||+. +.+
T Consensus 194 ------------~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~ 233 (297)
T PRK14186 194 ------------DLASITREADILVAAAGRPNLIGAEMV---KPGAVVVDVG-IHR 233 (297)
T ss_pred ------------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 1221 3566666 34 34666666 9999999998 554
No 339
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=88.18 E-value=0.75 Score=48.19 Aligned_cols=85 Identities=14% Similarity=0.199 Sum_probs=56.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcC----
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD---- 533 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~---- 533 (639)
.+|.++|. | .+|+++|+.|.+.|.+|.. |++++.+++++. .. ...+++++ ++++++| +-+
T Consensus 3 ~~IgviG~-G--~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~------~~~~~~~e~~~~~d~vi~~vp~~~~~ 72 (296)
T PRK11559 3 MKVGFIGL-G--IMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GA------ETASTAKAVAEQCDVIITMLPNSPHV 72 (296)
T ss_pred ceEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CC------eecCCHHHHHhcCCEEEEeCCCHHHH
Confidence 36889996 5 9999999999999999988 788888777653 10 11223432 5566644 211
Q ss_pred --cCChhh--hhcCCCCceeecccccCCc
Q 006607 534 --DLTGKE--QARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 534 --~~~~~~--q~~a~~G~~f~~~~~~~~~ 558 (639)
.+..++ ...+++|+++++.|.++|.
T Consensus 73 ~~v~~~~~~~~~~~~~g~iiid~st~~~~ 101 (296)
T PRK11559 73 KEVALGENGIIEGAKPGTVVIDMSSIAPL 101 (296)
T ss_pred HHHHcCcchHhhcCCCCcEEEECCCCCHH
Confidence 111111 2345899999999998885
No 340
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=88.18 E-value=0.37 Score=50.02 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=29.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (639)
+|+++|++| -||+.+|+.|.++|.+|.. |+.++.
T Consensus 2 ~vlItG~~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~ 37 (328)
T TIGR03466 2 KVLVTGATG--FVGSAVVRLLLEQGEEVRVLVRPTSDR 37 (328)
T ss_pred eEEEECCcc--chhHHHHHHHHHCCCEEEEEEecCccc
Confidence 689999999 9999999999999999988 655543
No 341
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.98 E-value=0.76 Score=48.82 Aligned_cols=146 Identities=23% Similarity=0.283 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh--
Q 006607 395 INSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS-- 449 (639)
Q Consensus 395 in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns-- 449 (639)
-+.-+..-.+.|++.|++..- |. +++.+++||.|. ++.++.= |++++. +=|||=+
T Consensus 46 s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~ 125 (278)
T PRK14172 46 SIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFI 125 (278)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHh
Confidence 334455556778888887753 32 344447788774 4344321 232331 2244432
Q ss_pred --------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCc
Q 006607 450 --------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV 509 (639)
Q Consensus 450 --------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~ 509 (639)
-|++.|++=+ +-.-++|+++|.+. -||+-+|..|-++|..|++ .++
T Consensus 126 n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~AtVt~chs~------------ 191 (278)
T PRK14172 126 SVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSN--IVGKPVAQLLLNENATVTICHSK------------ 191 (278)
T ss_pred hHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCC------------
Confidence 3566665533 44678999999997 9999999999999999999 211
Q ss_pred ccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc--CCCCCcee
Q 006607 510 EAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY 566 (639)
Q Consensus 510 ~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y 566 (639)
+.+ +++ ++++|+| +| +.++++.. ++|++++|+- +++. ++--|+-+
T Consensus 192 --T~~------l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~~~gkl~GDvd~ 244 (278)
T PRK14172 192 --TKN------LKEVCKKADILVVAIGRPKFIDEEYV---KEGAIVIDVG-TSSVNGKITGDVNF 244 (278)
T ss_pred --CCC------HHHHHhhCCEEEEcCCCcCccCHHHc---CCCcEEEEee-ccccCCceeeeccH
Confidence 011 222 3566666 33 35777766 9999999996 5553 45556653
No 342
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=87.88 E-value=0.75 Score=49.33 Aligned_cols=121 Identities=17% Similarity=0.222 Sum_probs=82.0
Q ss_pred cceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceee
Q 006607 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 517 (639)
Q Consensus 440 L~irvv~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~ 517 (639)
.+-|++.+.+. ....+++...++|=.+|=- -.|++.|.-|-+.|.+|++ |++++.+++++.=.+-.
T Consensus 15 ~~~~~~~~~~~---~~s~~~~~s~~~iGFIGLG---~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~------ 82 (327)
T KOG0409|consen 15 FSRRLVKASET---AMSSRITPSKTRIGFIGLG---NMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVA------ 82 (327)
T ss_pred hcccccccccc---cccccCCcccceeeEEeec---cchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhh------
Confidence 44566666665 5566666667788888754 7899999999999999999 99999999987722111
Q ss_pred ecccc-ccceeEE--EEcCcCChhhhhc--------CCCCcee-ecccccCCc-------CC-CCCceeecCCcc
Q 006607 518 STSYA-AHKTKIW--LVGDDLTGKEQAR--------APKGTIF-IPYTQIPPR-------KL-RKDCFYHSTPAM 572 (639)
Q Consensus 518 ~~~~~-~~~~~vw--ivg~~~~~~~q~~--------a~~G~~f-~~~~~~~~~-------~~-R~dc~y~~~~a~ 572 (639)
-+..+ ++++|++ +|++....+|..- .++|-.. +|-|-++|. +. ++||.|.+.|+-
T Consensus 83 ~sPaeVae~sDvvitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vDAPVS 157 (327)
T KOG0409|consen 83 NSPAEVAEDSDVVITMVPNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVDAPVS 157 (327)
T ss_pred CCHHHHHhhcCEEEEEcCChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEecccc
Confidence 11122 1344443 3666666655432 3444444 888888887 22 399999999974
No 343
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=87.86 E-value=1.5 Score=39.85 Aligned_cols=86 Identities=13% Similarity=0.157 Sum_probs=48.7
Q ss_pred EEEEecccCchhhHHHHHHHHhc-cCcEEEe---cchhhHHHHHhhCCccccccee-eec--cccccceeEEE--EcCcC
Q 006607 465 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT---ICKDDYEKLKLRIPVEAQHNLV-LST--SYAAHKTKIWL--VGDDL 535 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~-~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~-~~~--~~~~~~~~vwi--vg~~~ 535 (639)
+|.++|++| .+|+.++..|.+ +++++.. +++++-+.++..-+. .++..+ ..+ .++..++++++ +++..
T Consensus 1 ki~iiG~~g--~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~ 77 (122)
T smart00859 1 KVAIVGATG--YVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPH-LKGEVVLELEPEDFEELAVDIVFLALPHGV 77 (122)
T ss_pred CEEEECCCC--hHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcc-cccccccccccCChhhcCCCEEEEcCCcHH
Confidence 478999999 999999999996 6877766 332222233222111 100101 111 12213566655 45444
Q ss_pred Chh----hhhcCCCCceeeccc
Q 006607 536 TGK----EQARAPKGTIFIPYT 553 (639)
Q Consensus 536 ~~~----~q~~a~~G~~f~~~~ 553 (639)
..+ -+..+.+|.+++|.+
T Consensus 78 ~~~~~~~~~~~~~~g~~viD~s 99 (122)
T smart00859 78 SKEIAPLLPKAAEAGVKVIDLS 99 (122)
T ss_pred HHHHHHHHHhhhcCCCEEEECC
Confidence 444 233468999999988
No 344
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=87.82 E-value=0.54 Score=47.70 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=30.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
.+.|+++|++| -||+++|+.|.++|.+|.+ +++++
T Consensus 9 ~k~vlItG~s~--gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 9 GKIIIVTGGSS--GIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 46799999998 9999999999999999998 44443
No 345
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=87.73 E-value=0.58 Score=49.76 Aligned_cols=29 Identities=10% Similarity=0.184 Sum_probs=25.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
++|+|+|+|| -||+++|+.|+++|.+++.
T Consensus 2 ~~vlVtGatG--fIG~~l~~~L~~~g~~~v~ 30 (355)
T PRK10217 2 RKILITGGAG--FIGSALVRYIINETSDAVV 30 (355)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHHcCCCEEE
Confidence 5799999999 9999999999999977543
No 346
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=87.57 E-value=1 Score=48.77 Aligned_cols=83 Identities=22% Similarity=0.148 Sum_probs=57.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--------Ec
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------VG 532 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------vg 532 (639)
.++|-++|.- .||+++|..|..-|.+|+..++..-+........ ....++++ +.+|+++ --
T Consensus 142 gkTvGIiG~G---~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~------~~~~~Ld~lL~~sDiv~lh~PlT~eT~ 212 (324)
T COG0111 142 GKTVGIIGLG---RIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGV------VGVDSLDELLAEADILTLHLPLTPETR 212 (324)
T ss_pred CCEEEEECCC---HHHHHHHHHHHhCCCeEEEECCCCchhhhccccc------eecccHHHHHhhCCEEEEcCCCCcchh
Confidence 5688889887 9999999999999999999333222211111010 12344554 5666644 23
Q ss_pred CcCChhhhhcCCCCceeecccc
Q 006607 533 DDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 533 ~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
..|+.++..+||+|++||-++|
T Consensus 213 g~i~~~~~a~MK~gailIN~aR 234 (324)
T COG0111 213 GLINAEELAKMKPGAILINAAR 234 (324)
T ss_pred cccCHHHHhhCCCCeEEEECCC
Confidence 4577889999999999999999
No 347
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=87.50 E-value=2.1 Score=45.98 Aligned_cols=101 Identities=14% Similarity=0.116 Sum_probs=61.5
Q ss_pred ChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec---c
Q 006607 448 SSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---S 520 (639)
Q Consensus 448 nsltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~---~ 520 (639)
+.+||+..+... .+..+.|++.|++| -||.++++.+...|.+|.. +++++.+.++++++.+.- +... +
T Consensus 142 ~~~TA~~al~~~~~~~~g~~VlV~GaaG--~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~v---i~~~~~~~ 216 (348)
T PLN03154 142 AGFTAYAGFYEVCSPKKGDSVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA---FNYKEEPD 216 (348)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEE---EECCCccc
Confidence 344555554322 23457899999998 9999999988899999876 778888888765554221 1111 1
Q ss_pred c----cc---cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006607 521 Y----AA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 521 ~----~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+ ++ ...++++ +|.....+-...+.+|-.++-+.
T Consensus 217 ~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G 258 (348)
T PLN03154 217 LDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCG 258 (348)
T ss_pred HHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEEC
Confidence 1 11 2345555 44333334444566666676665
No 348
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=87.47 E-value=3.4 Score=44.38 Aligned_cols=162 Identities=19% Similarity=0.229 Sum_probs=94.7
Q ss_pred HHHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHH
Q 006607 405 EADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVV 455 (639)
Q Consensus 405 ~A~~~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v 455 (639)
-|.++|.+++.|+. +.|+|.+ ....-+.+.|+|+ ..++.|+.+-+ +=+.++
T Consensus 64 A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~~D~iv~R~~~~~~~~~~a~~~~vPVINag~~~~HPtQaL~Dl~Ti 143 (304)
T PRK00779 64 GMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRYVDAIMIRTFEHETLEELAEYSTVPVINGLTDLSHPCQILADLLTI 143 (304)
T ss_pred HHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHhCCEEEEcCCChhHHHHHHHhCCCCEEeCCCCCCChHHHHHHHHHH
Confidence 36789999999964 3344544 4446677888887 34577776643 113444
Q ss_pred HhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhCCcccccceeeec-ccc-c-cceeE
Q 006607 456 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-HKTKI 528 (639)
Q Consensus 456 ~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~-~-~~~~v 528 (639)
.+.... +..+|.++|..+ .+.+..+..|.+-|.+|.+-.++.++ .+.++..++.+.. +.++ +++ + ++++|
T Consensus 144 ~e~~g~l~gl~i~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~aDv 220 (304)
T PRK00779 144 YEHRGSLKGLKVAWVGDGN--NVANSLLLAAALLGFDLRVATPKGYEPDPEIVEKIAKETGAS-IEVTHDPKEAVKGADV 220 (304)
T ss_pred HHHhCCcCCcEEEEEeCCC--ccHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHcCCe-EEEEcCHHHHhCCCCE
Confidence 444432 346899999965 89999999999999999994444332 1221111222233 3333 455 3 88888
Q ss_pred EEEcCcCChhh---hhcCCCCceeecccccCCc---CCCCCce-eecCCcc
Q 006607 529 WLVGDDLTGKE---QARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 572 (639)
Q Consensus 529 wivg~~~~~~~---q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~ 572 (639)
+....|.+..+ |.... ..+-+| +++.+ ..|+|+. .|.+|+.
T Consensus 221 vy~~~w~~~~~~~~~~~~~--~~~~~y-~v~~~~l~~~~~~~ivmHplP~~ 268 (304)
T PRK00779 221 VYTDVWVSMGQEAEAEERL--KAFAPY-QVNEELMALAKPDAIFMHCLPAH 268 (304)
T ss_pred EEecCccccccchhHHHHH--HHhccc-CCCHHHHHhcCCCeEEecCCCcc
Confidence 88766554321 10000 011223 36666 4567765 4777753
No 349
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=87.28 E-value=1.2 Score=48.20 Aligned_cols=87 Identities=10% Similarity=0.064 Sum_probs=54.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC-------------cccccceeeeccccc--c
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQHNLVLSTSYAA--H 524 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-------------~~~~~~l~~~~~~~~--~ 524 (639)
+-++|.|+|+- -+|+.+|..+++.|.+|++ ++++..+.+++.+. .+....+-..+++++ +
T Consensus 6 ~i~~VaVIGaG---~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~ 82 (321)
T PRK07066 6 DIKTFAAIGSG---VIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVA 82 (321)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhc
Confidence 45689999986 8999999999999999999 66666655443221 111122223345653 7
Q ss_pred ceeEEE--EcCcCChhh------hhcCCCCceeec
Q 006607 525 KTKIWL--VGDDLTGKE------QARAPKGTIFIP 551 (639)
Q Consensus 525 ~~~vwi--vg~~~~~~~------q~~a~~G~~f~~ 551 (639)
+++++| |-+.++-+. ...+|+++++.-
T Consensus 83 ~aDlViEavpE~l~vK~~lf~~l~~~~~~~aIlaS 117 (321)
T PRK07066 83 DADFIQESAPEREALKLELHERISRAAKPDAIIAS 117 (321)
T ss_pred CCCEEEECCcCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 887766 222222111 135789986653
No 350
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=87.27 E-value=0.67 Score=50.37 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=29.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..++|+|+|+|| -||+++|+.|.++|.+|+.
T Consensus 20 ~~~~IlVtGgtG--fIG~~l~~~L~~~G~~V~~ 50 (370)
T PLN02695 20 EKLRICITGAGG--FIASHIARRLKAEGHYIIA 50 (370)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHhCCCEEEE
Confidence 567899999999 9999999999999999988
No 351
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=87.26 E-value=1.6 Score=41.34 Aligned_cols=65 Identities=25% Similarity=0.312 Sum_probs=42.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcccccce--eeec--cccc-cceeEEEE
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNL--VLST--SYAA-HKTKIWLV 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~~~l--~~~~--~~~~-~~~~vwiv 531 (639)
+|.++||+| .||+++|..|+..+. ++.| +++++.+....++..-..... ..+. .+++ ++++|+|+
T Consensus 2 KV~IiGa~G--~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvi 75 (141)
T PF00056_consen 2 KVAIIGAAG--NVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVI 75 (141)
T ss_dssp EEEEESTTS--HHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEE
T ss_pred EEEEECCCC--hHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEE
Confidence 689999998 999999999995554 4555 666666655554333221111 2233 3666 99988775
No 352
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=87.25 E-value=0.89 Score=53.76 Aligned_cols=45 Identities=16% Similarity=0.207 Sum_probs=38.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 413 ~gkvvLVTGasg--gIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~ 459 (676)
T TIGR02632 413 ARRVAFVTGGAG--GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEIN 459 (676)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH
Confidence 357899999998 9999999999999999998 88888877766643
No 353
>PRK08309 short chain dehydrogenase; Provisional
Probab=87.22 E-value=0.83 Score=45.05 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=33.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
.|+++|+|| -+ .++++.|+++|.+|.+ |++++.+.++.+++
T Consensus 2 ~vlVtGGtG--~g-g~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~ 44 (177)
T PRK08309 2 HALVIGGTG--ML-KRVSLWLCEKGFHVSVIARREVKLENVKREST 44 (177)
T ss_pred EEEEECcCH--HH-HHHHHHHHHCcCEEEEEECCHHHHHHHHHHhh
Confidence 589999986 55 5699999999999988 88888888876554
No 354
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=87.16 E-value=1 Score=48.33 Aligned_cols=138 Identities=17% Similarity=0.210 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006607 394 AINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (639)
Q Consensus 394 ~in~~I~~Ai~~A~~~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 442 (639)
+-+.-+...++.|++.|++. .-|. ++..++++|.|- ++.+..= |++++.
T Consensus 52 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~ 131 (299)
T PLN02516 52 DSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHP 131 (299)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCH
Confidence 44455666677888888875 4453 223336677774 3333311 221221
Q ss_pred ----eeecC--C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006607 443 ----KVVDG--S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (639)
Q Consensus 443 ----rvv~G--n----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (639)
|+..| + .-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 132 ~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~--iVGkPla~lL~~~~ATVtvchs~T-------- 201 (299)
T PLN02516 132 LNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSN--IVGLPVSLLLLKADATVTVVHSRT-------- 201 (299)
T ss_pred hhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence 33333 1 34677766544 44688999999997 9999999999999999999 2210
Q ss_pred CCcccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCC
Q 006607 507 IPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ ++++|+| +|+ .++++.. ++|++++|+. +..
T Consensus 202 ------~------nl~~~~~~ADIvv~AvGk~~~i~~~~v---k~gavVIDvG-in~ 242 (299)
T PLN02516 202 ------P------DPESIVREADIVIAAAGQAMMIKGDWI---KPGAAVIDVG-TNA 242 (299)
T ss_pred ------C------CHHHHHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEee-ccc
Confidence 1 1222 3566666 343 4555555 9999999998 544
No 355
>PRK07574 formate dehydrogenase; Provisional
Probab=87.08 E-value=0.98 Score=50.07 Aligned_cols=99 Identities=12% Similarity=0.220 Sum_probs=64.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-HHHHhhCCcccccceeeeccccc--cceeEEEE-------
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-EKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~-~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------- 531 (639)
..++|.++|.- .||+++|+.|..-|.+|...++.+. ....++.+. ....++++ ++++++++
T Consensus 191 ~gktVGIvG~G---~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~------~~~~~l~ell~~aDvV~l~lPlt~~ 261 (385)
T PRK07574 191 EGMTVGIVGAG---RIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGL------TYHVSFDSLVSVCDVVTIHCPLHPE 261 (385)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCc------eecCCHHHHhhcCCEEEEcCCCCHH
Confidence 35679999985 9999999999999999998322211 111122211 11234554 67777552
Q ss_pred -cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006607 532 -GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 532 -g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
-..++.+....+++|+.+|.++| ++.+ +++ -|++.++-
T Consensus 262 T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i~GAaLDV~~~EP 315 (385)
T PRK07574 262 TEHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDVWFPQP 315 (385)
T ss_pred HHHHhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCccEEEEecCCCCC
Confidence 23456788899999999999999 4332 444 57777664
No 356
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.06 E-value=1.6 Score=46.70 Aligned_cols=138 Identities=17% Similarity=0.228 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006607 394 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (639)
Q Consensus 394 ~in~~I~~Ai~~A~~~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 442 (639)
+-+.-+...++.|++.|++..-.= ++..+++||.|- ++.++.= |++++.
T Consensus 39 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p 118 (287)
T PRK14181 39 ASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHP 118 (287)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCCh
Confidence 445556677788899998875442 344457788765 3333311 222321
Q ss_pred ----eeecCC-----hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHHH
Q 006607 443 ----KVVDGS-----SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKL 503 (639)
Q Consensus 443 ----rvv~Gn-----sltaa~v~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~l 503 (639)
|+..|+ .-|+..|++= |+-.-++|+++|... -||+-+|..|.++ +-.|++ .++.
T Consensus 119 ~n~g~l~~g~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~AtVtvchs~T----- 191 (287)
T PRK14181 119 VNMGKLLLGETDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSN--IVGKPLAALLMQKHPDTNATVTLLHSQS----- 191 (287)
T ss_pred hhHHHHhcCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHhCcCCCCCEEEEeCCCC-----
Confidence 233344 2366666664 445689999999997 9999999999988 788888 2111
Q ss_pred HhhCCcccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCC
Q 006607 504 KLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 504 ~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
.++++ ++++|+| +|+ -++++.. ++|++++|+. +.+
T Consensus 192 ---------------~~l~~~~~~ADIvV~AvG~p~~i~~~~i---k~GavVIDvG-in~ 232 (287)
T PRK14181 192 ---------------ENLTEILKTADIIIAAIGVPLFIKEEMI---AEKAVIVDVG-TSR 232 (287)
T ss_pred ---------------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 01222 4666766 443 4676666 9999999998 554
No 357
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=87.03 E-value=0.51 Score=50.67 Aligned_cols=66 Identities=17% Similarity=0.290 Sum_probs=42.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcE--EEe--cchhhHHHHHhhCCccc---ccceeee-ccccc-cceeEEEE
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLKLRIPVEA---QHNLVLS-TSYAA-HKTKIWLV 531 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~--v~~--~~~~~~~~l~~~~~~~~---~~~l~~~-~~~~~-~~~~vwiv 531 (639)
+.+|.++|| | .||+++|..|+.+|.. +.| .++++.+-...++.... ..+-+.. ++|++ ++++++|+
T Consensus 3 ~~Ki~IiGa-G--~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvi 77 (312)
T cd05293 3 RNKVTVVGV-G--QVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIV 77 (312)
T ss_pred CCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEE
Confidence 458999997 8 9999999999976764 444 55555544333322211 1122444 35777 89988775
No 358
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.01 E-value=0.99 Score=48.38 Aligned_cols=139 Identities=19% Similarity=0.233 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeec-CCCCcce-----------------
Q 006607 393 EAINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLER-QPNKLKI----------------- 442 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------------- 442 (639)
.+-+.-+...++.|++.|++..-.= ++...+++|.|- ++.++. -|++++.
T Consensus 45 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~ 124 (297)
T PRK14168 45 PASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFH 124 (297)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccC
Confidence 3455556677778889998875431 122236677774 323331 1222331
Q ss_pred -----eeecCC------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHH
Q 006607 443 -----KVVDGS------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYE 501 (639)
Q Consensus 443 -----rvv~Gn------sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~ 501 (639)
|+..|+ .-|+++|++=+ +-.-++|+++|.+. -||+-+|..|.++ +-.|++ .++-
T Consensus 125 ~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~atVtv~hs~T--- 199 (297)
T PRK14168 125 PVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSN--IVGKPIANMMTQKGPGANATVTIVHTRS--- 199 (297)
T ss_pred hhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cccHHHHHHHHhcccCCCCEEEEecCCC---
Confidence 333443 34666666644 44678999999997 9999999999988 788888 2111
Q ss_pred HHHhhCCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607 502 KLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 502 ~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ ++++|+| +| ..++++.. ++|+++||+. ++.
T Consensus 200 -----------~------~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gavVIDvG-in~ 240 (297)
T PRK14168 200 -----------K------NLARHCQRADILIVAAGVPNLVKPEWI---KPGATVIDVG-VNR 240 (297)
T ss_pred -----------c------CHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEecC-CCc
Confidence 0 1222 3566766 34 35777776 9999999997 554
No 359
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.96 E-value=0.86 Score=48.56 Aligned_cols=138 Identities=18% Similarity=0.236 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ecc-------cccccccccCCce--eeecCC--CCcce------------------
Q 006607 394 AINSLIEEAILEADAKGVKVIS--LGL-------LNQGEELNRNGEI--YLERQP--NKLKI------------------ 442 (639)
Q Consensus 394 ~in~~I~~Ai~~A~~~G~kv~~--LG~-------ln~~e~ln~~g~~--~~~k~p--~~L~i------------------ 442 (639)
+-+.-++.-++.|++.|++..- |-. ++..+++|.|-.+ .+...| ++++.
T Consensus 46 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~ 125 (284)
T PRK14177 46 ASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTT 125 (284)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCCh
Confidence 3444455666788888887655 322 2233667775421 222332 22331
Q ss_pred ----eeecCC----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006607 443 ----KVVDGS----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (639)
Q Consensus 443 ----rvv~Gn----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (639)
|+..|+ .-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++-
T Consensus 126 ~n~g~l~~g~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVt~chs~T---------- 193 (284)
T PRK14177 126 LSFGKLSMGVETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSP--ILGKPMAMLLTEMNATVTLCHSKT---------- 193 (284)
T ss_pred hhHHHHHcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC----------
Confidence 222332 23666666544 34678999999998 9999999999999999999 2111
Q ss_pred cccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607 509 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 509 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
.+ +++ ++++|+| +| +.++++.. ++|++++|+. +..
T Consensus 194 ----~~------l~~~~~~ADIvIsAvGk~~~i~~~~i---k~gavVIDvG-in~ 234 (284)
T PRK14177 194 ----QN------LPSIVRQADIIVGAVGKPEFIKADWI---SEGAVLLDAG-YNP 234 (284)
T ss_pred ----CC------HHHHHhhCCEEEEeCCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence 11 221 3566666 34 34677666 9999999998 554
No 360
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.96 E-value=0.99 Score=48.01 Aligned_cols=163 Identities=22% Similarity=0.258 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 006607 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 449 (639)
.+-+.-+...++.|++.|++.. -|. +++.+++||.|- ++.++.= |++++. +=|||=+
T Consensus 43 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~ 122 (281)
T PRK14183 43 PASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFH 122 (281)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccC
Confidence 3445556667778899998754 342 333346788773 3344321 232331 2244443
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (639)
Q Consensus 450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (639)
-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++ -++|++
T Consensus 123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--~VG~Pla~lL~~~~AtVti~hs~--T~~l~~-- 196 (281)
T PRK14183 123 PYNVGRLVTGLDGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASN--IVGKPMAALLLNANATVDICHIF--TKDLKA-- 196 (281)
T ss_pred hhhhhHHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCC--CcCHHH--
Confidence 3677776544 44688999999997 9999999999999999998 211 111111
Q ss_pred CcccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCceeec-----CCccccC
Q 006607 508 PVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMIIP 575 (639)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~~P 575 (639)
.+ +.++|+| +| +.++++.. ++|+++||+. +.+. ++--|+-+.+ ...+.||
T Consensus 197 ----------~~----~~ADIvV~AvGkp~~i~~~~v---k~gavvIDvG-in~~~~gkl~GDVd~~~~~~~a~~iTPVP 258 (281)
T PRK14183 197 ----------HT----KKADIVIVGVGKPNLITEDMV---KEGAIVIDIG-INRTEDGRLVGDVDFENVAKKCSYITPVP 258 (281)
T ss_pred ----------HH----hhCCEEEEecCcccccCHHHc---CCCcEEEEee-ccccCCCCeECCccHHHHHhhceEecCCC
Confidence 00 3555655 34 34666665 9999999998 6652 4445555332 1124466
Q ss_pred CCCc
Q 006607 576 PSLS 579 (639)
Q Consensus 576 ~~~~ 579 (639)
+.+.
T Consensus 259 GGVG 262 (281)
T PRK14183 259 GGVG 262 (281)
T ss_pred CCCh
Confidence 6654
No 361
>PLN02928 oxidoreductase family protein
Probab=86.81 E-value=1.4 Score=47.98 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=59.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccce----eeeccccc--cceeEEEE--
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNL----VLSTSYAA--HKTKIWLV-- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l----~~~~~~~~--~~~~vwiv-- 531 (639)
..++|.++|.- .||+++|+.|..-|.+|+. |+.++-..-...++.+.-..+ ....++++ +.++++++
T Consensus 158 ~gktvGIiG~G---~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 158 FGKTVFILGYG---AIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 35789999985 9999999999999999988 332211100000010000000 01224444 67777663
Q ss_pred ------cCcCChhhhhcCCCCceeecccc---cCCc
Q 006607 532 ------GDDLTGKEQARAPKGTIFIPYTQ---IPPR 558 (639)
Q Consensus 532 ------g~~~~~~~q~~a~~G~~f~~~~~---~~~~ 558 (639)
-..++.++..+|++|+++|.++| |+.+
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~ 270 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYD 270 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECCCccccCHH
Confidence 34577889999999999999999 5544
No 362
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=86.78 E-value=2.9 Score=45.61 Aligned_cols=165 Identities=16% Similarity=0.208 Sum_probs=101.1
Q ss_pred HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 006607 406 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV 456 (639)
Q Consensus 406 A~~~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gnsl---------taa~v~ 456 (639)
+.++|.+++.|+.= .++|. |.+..-+.+.|+|+ ..+|+|+.|-|- =+.++.
T Consensus 67 ~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 146 (334)
T PRK12562 67 AYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQ 146 (334)
T ss_pred HHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHhCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 46799999999643 33344 35566677888876 356888887541 245666
Q ss_pred hcCc---CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHh---hCCcccccceeeecccc-c-cc
Q 006607 457 NSLP---KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKL---RIPVEAQHNLVLSTSYA-A-HK 525 (639)
Q Consensus 457 ~~i~---~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~---~~~~~~~~~l~~~~~~~-~-~~ 525 (639)
+... -+..+|.++|... +.+++..+..+++-|.++.+-.++.++ .+.+ +...+.+.++....+++ + ++
T Consensus 147 e~~g~~~l~gl~va~vGD~~-~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~ 225 (334)
T PRK12562 147 EHLPGKAFNEMTLVYAGDAR-NNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAECSALAQKHGGKITLTEDIAAGVKG 225 (334)
T ss_pred HHhCCCCcCCcEEEEECCCC-CCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCC
Confidence 6553 2357999999863 469999999888999999983333322 1111 11122233322233565 4 88
Q ss_pred eeEEEEcCcCChhhhhc--CCCCceeecccccCCc--CC--CCCcee-ecCCcc
Q 006607 526 TKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--KL--RKDCFY-HSTPAM 572 (639)
Q Consensus 526 ~~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~--~~--R~dc~y-~~~~a~ 572 (639)
++|+....|.+..+|.. ...-..|-+|. ++++ +. |+||.+ |.+|+.
T Consensus 226 aDvvyt~~w~sm~~~~~~~~~~~~~~~~y~-v~~ell~~a~~~~~i~mHcLP~~ 278 (334)
T PRK12562 226 ADFIYTDVWVSMGEPKEKWAERIALLRGYQ-VNSKMMALTGNPQVKFLHCLPAF 278 (334)
T ss_pred CCEEEEcCccccccchhhHHHHHHhccCCc-CCHHHHHhhcCCCCEEECCCCCC
Confidence 88888877765443321 01112455664 8888 32 688875 888873
No 363
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=86.74 E-value=1.7 Score=37.45 Aligned_cols=30 Identities=27% Similarity=0.361 Sum_probs=26.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~ 494 (639)
..+++.++|+ | .+|+.++++|++. +.++.+
T Consensus 22 ~~~~v~i~G~-G--~~g~~~a~~l~~~~~~~v~v 52 (86)
T cd05191 22 KGKTVVVLGA-G--EVGKGIAKLLADEGGKKVVL 52 (86)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEE
Confidence 4678999999 7 9999999999987 677777
No 364
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=86.56 E-value=0.91 Score=47.76 Aligned_cols=28 Identities=25% Similarity=0.300 Sum_probs=26.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+|+|+|+|| -||+++|+.|.++|.+|++
T Consensus 2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~ 29 (338)
T PRK10675 2 RVLVTGGSG--YIGSHTCVQLLQNGHDVVI 29 (338)
T ss_pred eEEEECCCC--hHHHHHHHHHHHCCCeEEE
Confidence 589999999 9999999999999999987
No 365
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=86.37 E-value=1.2 Score=45.06 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=35.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+|.++|++| .+|+++|+.|++.|.+|.+ |++++.++++++
T Consensus 2 kI~IIGG~G--~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTG--DQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCC--HHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 588999888 9999999999999999988 888888887765
No 366
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=86.24 E-value=1.1 Score=48.96 Aligned_cols=82 Identities=17% Similarity=0.161 Sum_probs=58.8
Q ss_pred hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCcccccceeeeccccc
Q 006607 450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 523 (639)
Q Consensus 450 ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 523 (639)
-|++.|++=+ +-.-++|+|+|... -||+-+|..|.++|-.|++ .++- . ++++
T Consensus 196 CTp~avi~LL~~~~i~l~GK~vvVIGRS~--iVGkPla~LL~~~~ATVTicHs~T--------------~------nl~~ 253 (345)
T PLN02897 196 CTPKGCVELLIRSGVEIAGKNAVVIGRSN--IVGLPMSLLLQRHDATVSTVHAFT--------------K------DPEQ 253 (345)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCEEEEEcCCC--------------C------CHHH
Confidence 4666666544 44688999999997 9999999999999999999 2111 0 1121
Q ss_pred --cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607 524 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 524 --~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
+++||+| +| ..++++.. ++|+++||+. +.+
T Consensus 254 ~~~~ADIvIsAvGkp~~v~~d~v---k~GavVIDVG-in~ 289 (345)
T PLN02897 254 ITRKADIVIAAAGIPNLVRGSWL---KPGAVVIDVG-TTP 289 (345)
T ss_pred HHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence 3667766 33 34677666 9999999998 555
No 367
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=86.22 E-value=1.1 Score=47.15 Aligned_cols=40 Identities=25% Similarity=0.307 Sum_probs=34.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
++|.++|+. .+|+++|..|++.|.+|++ ++++.+++.++.
T Consensus 4 ~kIaViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 4 KNVTVAGAG---VLGSQIAFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred cEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 579999985 9999999999999999999 788877776654
No 368
>PLN02240 UDP-glucose 4-epimerase
Probab=86.22 E-value=1.1 Score=47.39 Aligned_cols=29 Identities=21% Similarity=0.288 Sum_probs=27.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
++|+++|+|| -||+++++.|.++|.+|+.
T Consensus 6 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~ 34 (352)
T PLN02240 6 RTILVTGGAG--YIGSHTVLQLLLAGYKVVV 34 (352)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEE
Confidence 5799999999 9999999999999999988
No 369
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.02 E-value=1.9 Score=46.25 Aligned_cols=100 Identities=20% Similarity=0.181 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeec-CCCCcce----------eeecCCh
Q 006607 393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS 449 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gns 449 (639)
.+-+.-++..++.|++.|+++ .-|- +++..+++|.|- ++.++. -|++++. +=|||=+
T Consensus 44 ~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~ 123 (296)
T PRK14188 44 PASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLH 123 (296)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCC
Confidence 345556777888999999984 4443 223336788884 434442 1333431 2245543
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
-|+++|++=+ +-.-++|.++|.++ -+|+.+|+.|.++|..|++
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~--~mG~PmA~~L~~~g~tVtv 187 (296)
T PRK14188 124 VVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSN--LVGKPMAQLLLAANATVTI 187 (296)
T ss_pred hhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCc--chHHHHHHHHHhCCCEEEE
Confidence 3566666433 44688999999998 9999999999999999999
No 370
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=85.96 E-value=1.3 Score=45.62 Aligned_cols=28 Identities=11% Similarity=0.173 Sum_probs=25.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccC--cEEEe
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMG--IKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~~ 494 (639)
+|+++|+|| .||+++++.|.++| .+|+.
T Consensus 1 ~ilItGatG--~iG~~l~~~l~~~~~~~~v~~ 30 (317)
T TIGR01181 1 RILVTGGAG--FIGSNFVRYILNEHPDAEVIV 30 (317)
T ss_pred CEEEEcCCc--hHHHHHHHHHHHhCCCCEEEE
Confidence 489999999 99999999999877 78876
No 371
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=85.77 E-value=8.7 Score=41.86 Aligned_cols=163 Identities=18% Similarity=0.159 Sum_probs=95.9
Q ss_pred HHHcCCcEEEeccc----cccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607 406 ADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 456 (639)
Q Consensus 406 A~~~G~kv~~LG~l----n~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~ 456 (639)
+.++|.+++-|+.= .++|.+ .+..-+.+.|+|+ ..+++|+.|-+ +=+.++.
T Consensus 68 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~rvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 147 (331)
T PRK02102 68 AIDLGAHVTYLGPNDSQLGKKESIEDTARVLGRMYDGIEYRGFKQEIVEELAKYSGVPVWNGLTDEWHPTQMLADFMTMK 147 (331)
T ss_pred HHHcCCCEEEcCcccccCCCCcCHHHHHHHHhhcCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 44899999998753 344554 5566677888877 24677877644 1234555
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHH---HHh---hCCcccccceeeec-ccc-c-cce
Q 006607 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEK---LKL---RIPVEAQHNLVLST-SYA-A-HKT 526 (639)
Q Consensus 457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~---l~~---~~~~~~~~~l~~~~-~~~-~-~~~ 526 (639)
+.... +..+|+++|... +.+.+..+..|++-|.+|.+-.++.++. +.+ +.....+.. +.++ +.+ + +++
T Consensus 148 e~~g~l~g~~va~vGd~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~ea~~~a 225 (331)
T PRK02102 148 EHFGPLKGLKLAYVGDGR-NNMANSLMVGGAKLGMDVRICAPKELWPEEELVALAREIAKETGAK-ITITEDPEEAVKGA 225 (331)
T ss_pred HHhCCCCCCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence 54432 457999999973 3689999999999999998833333321 111 111122233 3334 465 4 888
Q ss_pred eEEEEcCcCChhhhh-cCCCCceeecccccCCc--C--CCCCce-eecCCc
Q 006607 527 KIWLVGDDLTGKEQA-RAPKGTIFIPYTQIPPR--K--LRKDCF-YHSTPA 571 (639)
Q Consensus 527 ~vwivg~~~~~~~q~-~a~~G~~f~~~~~~~~~--~--~R~dc~-y~~~~a 571 (639)
+|+..+.|.+..+.. +...-..+-+| |++.+ + .++||. .|.+|+
T Consensus 226 Dvvyt~~w~~~~~~~~~~~~~~~~~~y-~vt~ell~~~~~~d~ivmH~lP~ 275 (331)
T PRK02102 226 DVIYTDVWVSMGEEDEWEERIKLLKPY-QVNMDLMKATGNPDVIFMHCLPA 275 (331)
T ss_pred CEEEEcCcccCccccchHHHHHhccCC-cCCHHHHhhhcCCCCEEECCCCC
Confidence 887776554311100 00011223445 38877 4 368887 478886
No 372
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=85.75 E-value=0.66 Score=49.45 Aligned_cols=102 Identities=21% Similarity=0.222 Sum_probs=68.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCCcccccceeeeccc-cc-cceeEEE--------E
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPVEAQHNLVLSTSY-AA-HKTKIWL--------V 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~-~~~l~~~~~~~~~~~l~~~~~~-~~-~~~~vwi--------v 531 (639)
+|.++|-- ..|...|.-|-++|.+|.+ |++++ -+.++++ +... ..+. ++ +.++++| |
T Consensus 2 kIafIGLG---~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~-Ga~~------a~s~~eaa~~aDvVitmv~~~~~V 71 (286)
T COG2084 2 KIAFIGLG---IMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAA-GATV------AASPAEAAAEADVVITMLPDDAAV 71 (286)
T ss_pred eEEEEcCc---hhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHc-CCcc------cCCHHHHHHhCCEEEEecCCHHHH
Confidence 57788865 8999999999999999999 88787 5555443 2222 1222 22 4555544 3
Q ss_pred cCcCCh--hhhhcCCCCceeecccccCCcCCC--------CCceeecCCccccCC
Q 006607 532 GDDLTG--KEQARAPKGTIFIPYTQIPPRKLR--------KDCFYHSTPAMIIPP 576 (639)
Q Consensus 532 g~~~~~--~~q~~a~~G~~f~~~~~~~~~~~R--------~dc~y~~~~a~~~P~ 576 (639)
.+.+.. .=...++||++|||.|-++|...| +-+.|.+-|++--+.
T Consensus 72 ~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~~ 126 (286)
T COG2084 72 RAVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGVP 126 (286)
T ss_pred HHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCch
Confidence 333332 123457899999999999998221 667788888875333
No 373
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=85.69 E-value=2.7 Score=46.52 Aligned_cols=110 Identities=19% Similarity=0.305 Sum_probs=71.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc--cc-----------ccceeeeccccc--ccee
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EA-----------QHNLVLSTSYAA--HKTK 527 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~--~~-----------~~~l~~~~~~~~--~~~~ 527 (639)
+|.++|.. .+|.++|..|++.|.+|+. +++++.+.|++.... +. ..++...+++++ ++++
T Consensus 2 kI~vIGlG---~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad 78 (411)
T TIGR03026 2 KIAVIGLG---YVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD 78 (411)
T ss_pred EEEEECCC---chhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence 58889975 9999999999999999999 888999988764211 00 112222334553 5666
Q ss_pred EEE--EcCcCCh-------------hhh-hcCCCCceeecccccCCc---CC-------------CCCceeecCCccccC
Q 006607 528 IWL--VGDDLTG-------------KEQ-ARAPKGTIFIPYTQIPPR---KL-------------RKDCFYHSTPAMIIP 575 (639)
Q Consensus 528 vwi--vg~~~~~-------------~~q-~~a~~G~~f~~~~~~~~~---~~-------------R~dc~y~~~~a~~~P 575 (639)
++| |++...+ ++. ..+++|++++.-|-+||. ++ ..||.+..+|..-.|
T Consensus 79 vvii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~~~g~~~~~d~~v~~~Pe~~~~ 158 (411)
T TIGR03026 79 VIIICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILERASGLKLGEDFYLAYNPEFLRE 158 (411)
T ss_pred EEEEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHhhcCCCCCCCceEEECCCcCCC
Confidence 644 6654321 111 235889999998877776 11 136666777766666
Q ss_pred CC
Q 006607 576 PS 577 (639)
Q Consensus 576 ~~ 577 (639)
+.
T Consensus 159 G~ 160 (411)
T TIGR03026 159 GN 160 (411)
T ss_pred CC
Confidence 65
No 374
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=85.65 E-value=0.99 Score=45.34 Aligned_cols=40 Identities=20% Similarity=0.300 Sum_probs=30.5
Q ss_pred cccCchhhHHHHHHHHhccCcEEEe--cchhh----HHHHHhhCCc
Q 006607 470 GTVTANKVANAVASSLCQMGIKVAT--ICKDD----YEKLKLRIPV 509 (639)
Q Consensus 470 Gatg~~kig~ava~~L~~~~~~v~~--~~~~~----~~~l~~~~~~ 509 (639)
|++..+-||++||+.|+++|.+|++ |++++ ++++.++.+.
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~ 46 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA 46 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC
Confidence 4552238999999999999999999 77776 5666665553
No 375
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=85.63 E-value=2 Score=47.43 Aligned_cols=39 Identities=18% Similarity=0.306 Sum_probs=34.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+|+++|+ | .+|+++|+.|+++|.+|.+ +++++.++++++
T Consensus 2 ~viIiG~-G--~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~ 42 (453)
T PRK09496 2 KIIIVGA-G--QVGYTLAENLSGENNDVTVIDTDEERLRRLQDR 42 (453)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh
Confidence 6899998 6 9999999999999999999 788898888763
No 376
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=85.54 E-value=1.4 Score=45.30 Aligned_cols=44 Identities=18% Similarity=0.288 Sum_probs=39.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+|+++|.++ -||++.|..+.+-|-+|.+ |+++++++.+++.|.
T Consensus 6 nTiLITGG~s--GIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~ 51 (245)
T COG3967 6 NTILITGGAS--GIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE 51 (245)
T ss_pred cEEEEeCCcc--hhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc
Confidence 3679998874 8999999999999999999 999999999999766
No 377
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=85.52 E-value=1.4 Score=48.85 Aligned_cols=45 Identities=18% Similarity=0.303 Sum_probs=36.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c--chhhHHHHHhhCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~--~~~~~~~l~~~~~ 508 (639)
..+.|+++|++| -||+++|+.|+++|.+|++ + +.++++++.++++
T Consensus 209 ~g~~vlItGasg--gIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~ 257 (450)
T PRK08261 209 AGKVALVTGAAR--GIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG 257 (450)
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC
Confidence 457899999998 9999999999999999998 3 3456777766654
No 378
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=85.40 E-value=1.3 Score=50.67 Aligned_cols=92 Identities=15% Similarity=0.156 Sum_probs=56.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC--------cc-----c---cccee-eeccccc-
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP--------VE-----A---QHNLV-LSTSYAA- 523 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~--------~~-----~---~~~l~-~~~~~~~- 523 (639)
++|.++|+- .+|+.||..|++.|.+|++ ++++.+++..+++. .+ . ....+ ..+++++
T Consensus 6 ~kV~VIGaG---~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~l 82 (503)
T TIGR02279 6 VTVAVIGAG---AMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLHAL 82 (503)
T ss_pred cEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHHHh
Confidence 469999995 9999999999999999999 88888775432211 11 0 01112 2335665
Q ss_pred cceeEEE--EcCcCChhhh------hcCCCCceee-cccccCCc
Q 006607 524 HKTKIWL--VGDDLTGKEQ------ARAPKGTIFI-PYTQIPPR 558 (639)
Q Consensus 524 ~~~~vwi--vg~~~~~~~q------~~a~~G~~f~-~~~~~~~~ 558 (639)
++|+++| |-+.++-++. ..+|++++++ .-|-+++.
T Consensus 83 ~~aDlVIEav~E~~~vK~~vf~~l~~~~~~~~IlasnTStl~i~ 126 (503)
T TIGR02279 83 ADAGLVIEAIVENLEVKKALFAQLEELCPADTIIASNTSSLSIT 126 (503)
T ss_pred CCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH
Confidence 7887776 3222222221 2468888876 45545544
No 379
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.35 E-value=2.3 Score=45.58 Aligned_cols=140 Identities=19% Similarity=0.267 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006607 393 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 442 (639)
Q Consensus 393 ~~in~~I~~Ai~~A~~~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 442 (639)
.+-+.-++..++.|++.|+++.-. . +++.++++|.|- ++.++.= |++++.
T Consensus 43 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~ 122 (295)
T PRK14174 43 PASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFH 122 (295)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 344555667778899999887544 2 444457788885 3344311 222331
Q ss_pred -----eeecCC------hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEe--cchhhH
Q 006607 443 -----KVVDGS------SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDY 500 (639)
Q Consensus 443 -----rvv~Gn------sltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~~--~~~~~~ 500 (639)
|+..|. .-|+++|++-+. -.-++|+++|... -||+-+|..|.+ +|..|++ .++..+
T Consensus 123 ~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l 200 (295)
T PRK14174 123 PENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSN--IVGKPMANLMLQKLKESNCTVTICHSATKDI 200 (295)
T ss_pred hhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHhccccCCCEEEEEeCCchhH
Confidence 222332 257777776554 3578999999997 999999999986 7888888 211111
Q ss_pred HHHHhhCCcccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607 501 EKLKLRIPVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 501 ~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
+ +.+ +.++++| +| +.++++.. ++|++++|++ ++.
T Consensus 201 ~---~~~----------------~~ADIvI~Avg~~~li~~~~v---k~GavVIDVg-i~~ 238 (295)
T PRK14174 201 P---SYT----------------RQADILIAAIGKARFITADMV---KPGAVVIDVG-INR 238 (295)
T ss_pred H---HHH----------------HhCCEEEEecCccCccCHHHc---CCCCEEEEee-ccc
Confidence 1 110 3556666 33 34676666 9999999998 554
No 380
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=85.32 E-value=2.7 Score=43.48 Aligned_cols=86 Identities=16% Similarity=0.195 Sum_probs=58.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--c----cc---c-cceeEE
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YA---A-HKTKIW 529 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~---~-~~~~vw 529 (639)
....|++.|++| .+|.++++.+...|.++.. ++.++.+.+++. +.+ .++... + ++ . +..+++
T Consensus 139 ~g~~vlI~g~~g--~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~-g~~---~~~~~~~~~~~~~i~~~~~~~~~d~v 212 (324)
T cd08292 139 PGQWLIQNAAGG--AVGKLVAMLAAARGINVINLVRRDAGVAELRAL-GIG---PVVSTEQPGWQDKVREAAGGAPISVA 212 (324)
T ss_pred CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhc-CCC---EEEcCCCchHHHHHHHHhCCCCCcEE
Confidence 356899999998 9999999988899999887 777787877663 321 112111 1 11 1 346776
Q ss_pred E--EcCcCChhhhhcCCCCceeeccc
Q 006607 530 L--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 530 i--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+ +|.....+-.+.++++.+|+.+.
T Consensus 213 ~d~~g~~~~~~~~~~l~~~g~~v~~g 238 (324)
T cd08292 213 LDSVGGKLAGELLSLLGEGGTLVSFG 238 (324)
T ss_pred EECCCChhHHHHHHhhcCCcEEEEEe
Confidence 6 55545555566777888888886
No 381
>PRK12367 short chain dehydrogenase; Provisional
Probab=85.18 E-value=1.1 Score=45.84 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=29.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 497 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~ 497 (639)
.+.++++|++| -||+++|+.|+++|.+|.+ |++
T Consensus 14 ~k~~lITGas~--gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 14 GKRIGITGASG--ALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEECCc
Confidence 46899999998 9999999999999999987 554
No 382
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=85.17 E-value=1.4 Score=46.62 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=63.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEE--EcCc-CCh
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD-LTG 537 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--vg~~-~~~ 537 (639)
+|.++|. | .+|.++|+.|.+.|.+|.+ |++++.++++++-.... .. ..++. . +++++++ +-+. +++
T Consensus 2 ~Ig~IGl-G--~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~-~s---~~~~~~~~~~~dvIi~~vp~~~~~~ 74 (298)
T TIGR00872 2 QLGLIGL-G--RMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGV-AN---LRELSQRLSAPRVVWVMVPHGIVDA 74 (298)
T ss_pred EEEEEcc-h--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCccc-CC---HHHHHhhcCCCCEEEEEcCchHHHH
Confidence 5888996 5 9999999999999999998 89999998887521111 00 11222 1 3455543 2111 111
Q ss_pred --hh-hhcCCCCceeecccccCCcCC--------CCCceeecCCccc
Q 006607 538 --KE-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMI 573 (639)
Q Consensus 538 --~~-q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~ 573 (639)
++ ....++|.++++.+-.+|... ++.+.|.+.|++-
T Consensus 75 v~~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vda~vsG 121 (298)
T TIGR00872 75 VLEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSG 121 (298)
T ss_pred HHHHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEecCCCC
Confidence 11 223578999999987665511 1456677777654
No 383
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=85.14 E-value=1.1 Score=50.44 Aligned_cols=66 Identities=17% Similarity=0.186 Sum_probs=45.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhcc-------Cc--EEEe--cchhhHHHHHhhCCcccc---cceeeec--cccc-cc
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQM-------GI--KVAT--ICKDDYEKLKLRIPVEAQ---HNLVLST--SYAA-HK 525 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~-------~~--~v~~--~~~~~~~~l~~~~~~~~~---~~l~~~~--~~~~-~~ 525 (639)
.-+|.++||+| .||+++|..|+.+ ++ ++.+ +++++.+-...++..... .+ +.++ +|++ ++
T Consensus 100 ~~KV~IIGAaG--~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~-v~i~~~~ye~~kd 176 (444)
T PLN00112 100 LINVAVSGAAG--MISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLRE-VSIGIDPYEVFQD 176 (444)
T ss_pred CeEEEEECCCc--HHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCc-eEEecCCHHHhCc
Confidence 45899999998 9999999999977 66 4555 777877755555433221 12 3333 4776 88
Q ss_pred eeEEEE
Q 006607 526 TKIWLV 531 (639)
Q Consensus 526 ~~vwiv 531 (639)
++|+|+
T Consensus 177 aDiVVi 182 (444)
T PLN00112 177 AEWALL 182 (444)
T ss_pred CCEEEE
Confidence 888664
No 384
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=85.02 E-value=1.5 Score=43.97 Aligned_cols=45 Identities=22% Similarity=0.343 Sum_probs=34.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh--HHHHHhhCC
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLRIP 508 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~--~~~l~~~~~ 508 (639)
..+.|+++|+++ -||+++|+.|+++|.+|++ ++.++ .+.+.+...
T Consensus 4 ~~~~ilITGas~--GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~ 52 (251)
T COG1028 4 SGKVALVTGASS--GIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK 52 (251)
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH
Confidence 457899999996 8999999999999999776 44443 455555433
No 385
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=84.97 E-value=1.1 Score=44.45 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=27.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 5 ~k~~lVtGas~--~iG~~ia~~l~~~G~~v~~ 34 (235)
T PRK06550 5 TKTVLITGAAS--GIGLAQARAFLAQGAQVYG 34 (235)
T ss_pred CCEEEEcCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 46799999998 9999999999999999988
No 386
>PLN02527 aspartate carbamoyltransferase
Probab=84.94 E-value=7.3 Score=41.93 Aligned_cols=159 Identities=15% Similarity=0.226 Sum_probs=95.3
Q ss_pred HHHcCCcEEEecc------ccccccc-------ccCCceeeecCCC---------CcceeeecCCh----------hHHH
Q 006607 406 ADAKGVKVISLGL------LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS----------LAAA 453 (639)
Q Consensus 406 A~~~G~kv~~LG~------ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns----------ltaa 453 (639)
+.++|.+++.|+. +.++|.+ ++..-+.+.|+|+ ...++|+.+-+ .=+.
T Consensus 61 ~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ~LaDl~ 140 (306)
T PLN02527 61 MKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGYSDIIVLRHFESGAARRAAATAEIPVINAGDGPGQHPTQALLDVY 140 (306)
T ss_pred HHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHhCcEEEEECCChhHHHHHHHhCCCCEEECCCCCCCChHHHHHHHH
Confidence 4589999999965 2345554 6677788889986 35688887622 1245
Q ss_pred HHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCCcccccceeeec-ccc-c-cc
Q 006607 454 VVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-HK 525 (639)
Q Consensus 454 ~v~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~-~-~~ 525 (639)
++.+.... +..+|+++|..+-+.+.+..+..|++. |.++.+-.++.|+ .+.+++. +.+.+ +.++ +.+ + ++
T Consensus 141 Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~~a~~~ 218 (306)
T PLN02527 141 TIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKMKDDIKDYLT-SKGVE-WEESSDLMEVASK 218 (306)
T ss_pred HHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCCCHHHHHHHH-HcCCE-EEEEcCHHHHhCC
Confidence 56555432 457999999863137899999998886 9999883343332 2222221 22333 3344 565 4 88
Q ss_pred eeEEEEcCcCChhhhhcCCCCcee----ecccccCCc---CCCCCce-eecCC
Q 006607 526 TKIWLVGDDLTGKEQARAPKGTIF----IPYTQIPPR---KLRKDCF-YHSTP 570 (639)
Q Consensus 526 ~~vwivg~~~~~~~q~~a~~G~~f----~~~~~~~~~---~~R~dc~-y~~~~ 570 (639)
++|+.. ++++.|+.. .+-..+ =+| |++.+ ..|+||. .|.+|
T Consensus 219 aDvvyt-~~~q~e~~~--~~~~~~~~~~~~y-~v~~~ll~~a~~~~ivmHclP 267 (306)
T PLN02527 219 CDVLYQ-TRIQRERFG--ERIDLYEAARGKY-IVDKKVMDVLPKHAVVMHPLP 267 (306)
T ss_pred CCEEEE-CCcchhhhc--chHHHHHHhCCCc-eECHHHHhccCCCCEEECCCC
Confidence 988887 555533210 000111 123 37766 4567874 56666
No 387
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=84.85 E-value=1.7 Score=44.52 Aligned_cols=110 Identities=12% Similarity=0.160 Sum_probs=64.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcE---EEe--cc----hhhH-------HHHHhhCCcccccceeeecccc-c-
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK---VAT--IC----KDDY-------EKLKLRIPVEAQHNLVLSTSYA-A- 523 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~---v~~--~~----~~~~-------~~l~~~~~~~~~~~l~~~~~~~-~- 523 (639)
...+|++.||- ..|++||..|++.|++ +.+ |+ ++|- +++.++.+.. . .. .++. +
T Consensus 24 ~~~rvlvlGAG---gAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~---~-~~-~~l~~~l 95 (226)
T cd05311 24 EEVKIVINGAG---AAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPE---K-TG-GTLKEAL 95 (226)
T ss_pred cCCEEEEECch---HHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccC---c-cc-CCHHHHH
Confidence 46789999995 7999999999999985 777 55 3442 2333332111 1 11 1342 3
Q ss_pred cceeEEEE---cCcCChhhhhcCCCCceeecccccCCc-----CC-CCCc-eeecCCccccCCCCccc
Q 006607 524 HKTKIWLV---GDDLTGKEQARAPKGTIFIPYTQIPPR-----KL-RKDC-FYHSTPAMIIPPSLSNM 581 (639)
Q Consensus 524 ~~~~vwiv---g~~~~~~~q~~a~~G~~f~~~~~~~~~-----~~-R~dc-~y~~~~a~~~P~~~~~~ 581 (639)
.+++++|- .--++++..+.+.++.++.|.+ -|.. +. +..| ++.++..| +|.--+|+
T Consensus 96 ~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~G~~~-~~~Q~nn~ 161 (226)
T cd05311 96 KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVATGRSD-FPNQVNNV 161 (226)
T ss_pred hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEeCCCC-Ccccccee
Confidence 56777662 2235677777777776666887 3322 11 2467 46666444 44444444
No 388
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=84.80 E-value=2.3 Score=43.54 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=32.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
+++.++|+. .+|+.+|+-|.++|..|++ +++++.++
T Consensus 1 m~iiIiG~G---~vG~~va~~L~~~g~~Vv~Id~d~~~~~~ 38 (225)
T COG0569 1 MKIIIIGAG---RVGRSVARELSEEGHNVVLIDRDEERVEE 38 (225)
T ss_pred CEEEEECCc---HHHHHHHHHHHhCCCceEEEEcCHHHHHH
Confidence 368889988 9999999999999999999 88888876
No 389
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=84.75 E-value=9.3 Score=41.75 Aligned_cols=162 Identities=20% Similarity=0.225 Sum_probs=94.3
Q ss_pred HHHcCCcEEEeccc----cccccc-------ccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 006607 406 ADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV 456 (639)
Q Consensus 406 A~~~G~kv~~LG~l----n~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gnsl---------taa~v~ 456 (639)
+.++|.+++.|+.= +++|.+ ++..-+.+.|++. ..+++|+.|.+= =..++.
T Consensus 64 ~~~LGg~~i~l~~~~ss~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 143 (338)
T PRK02255 64 MTQLGGHAQYLAPGQIQLGGHESLEDTARVLSRLVDIIMARVDRHQTVVELAKYATVPVINGMSDYNHPTQELGDLFTMI 143 (338)
T ss_pred HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCcEEEEecCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 45799999999643 233433 4444456666654 345788877652 245666
Q ss_pred hcCc----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCCcccccceeeec-ccc-c
Q 006607 457 NSLP----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYA-A 523 (639)
Q Consensus 457 ~~i~----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~-------~~l~~~~~~~~~~~l~~~~-~~~-~ 523 (639)
+..+ -+..+|.++|..+ .+.+..+..|++-|.+|.+-.++.| +.+++.+. .++.. +.++ +++ +
T Consensus 144 e~~g~g~~l~glkv~~vGD~~--~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~-~~g~~-~~~~~d~~ea 219 (338)
T PRK02255 144 EHLPEGKKLEDCKVVFVGDAT--QVCVSLMFIATKMGMDFVHFGPKGYQLPEEHLAIAEENCE-VSGGS-VLVTDDVDEA 219 (338)
T ss_pred HHhCCCCCCCCCEEEEECCCc--hHHHHHHHHHHhCCCEEEEECCCccccCHHHHHHHHHHHH-hcCCe-EEEEcCHHHH
Confidence 6653 2356999999975 8999999999999999999333322 22222211 12223 3333 455 4
Q ss_pred -cceeEEEEcCcCChhhhhcCC-C-Cceeec-ccccCCc---CCCCCce-eecCCcc
Q 006607 524 -HKTKIWLVGDDLTGKEQARAP-K-GTIFIP-YTQIPPR---KLRKDCF-YHSTPAM 572 (639)
Q Consensus 524 -~~~~vwivg~~~~~~~q~~a~-~-G~~f~~-~~~~~~~---~~R~dc~-y~~~~a~ 572 (639)
++++|+..+-|.+...|...+ + =..|.| | |++.+ ..++||. .|.+|+-
T Consensus 220 v~~aDvvy~~~w~~~~~~~~~~~~r~~~~~~~y-~v~~ell~~a~~~~ivmHpLP~~ 275 (338)
T PRK02255 220 VKDADFVYTDVWYGLYDAELSEEERMAIFYPKY-QVTPELMAKAGPHAKFMHCLPAT 275 (338)
T ss_pred hCCCCEEEEcccHhhccchhhHHHHHHhhCCCc-eECHHHHhccCCCCEEeCCCCCc
Confidence 778887775554211110000 0 012233 4 37777 5568887 4888864
No 390
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=84.63 E-value=2.9 Score=49.21 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=27.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~ 494 (639)
..++|+|+|+|| =||+.+++.|.++ |.+|..
T Consensus 314 ~~~~VLVTGatG--FIGs~Lv~~Ll~~~g~~V~~ 345 (660)
T PRK08125 314 RRTRVLILGVNG--FIGNHLTERLLRDDNYEVYG 345 (660)
T ss_pred cCCEEEEECCCc--hHHHHHHHHHHhCCCcEEEE
Confidence 366899999999 9999999999975 799987
No 391
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=84.62 E-value=1.2 Score=44.56 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=28.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 7 ~~k~vlItGas~--~iG~~la~~l~~~G~~v~~ 37 (252)
T PRK08220 7 SGKTVWVTGAAQ--GIGYAVALAFVEAGAKVIG 37 (252)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 346899999998 9999999999999999998
No 392
>PLN02858 fructose-bisphosphate aldolase
Probab=84.51 E-value=1.4 Score=56.14 Aligned_cols=176 Identities=12% Similarity=0.103 Sum_probs=104.1
Q ss_pred cccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccc--cccc-cCCceee---ecC-CCCcceeeecCC----------
Q 006607 386 YNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQG--EELN-RNGEIYL---ERQ-PNKLKIKVVDGS---------- 448 (639)
Q Consensus 386 y~~~~~~~~in~~I~~Ai~~A~~~G~kv~~LG~ln~~--e~ln-~~g~~~~---~k~-p~~L~irvv~Gn---------- 448 (639)
|.-.|..+-+.|-+.-|...|++.|+..-...+..+. +..+ |.|+.-. .|. .+.-.+++.+-|
T Consensus 234 ~~~~F~l~l~~KDl~la~~~A~~~g~~lpl~~~a~~~~~~a~~~G~g~~D~sav~~~~~~~~g~~~~~~~~~~~~~~~~~ 313 (1378)
T PLN02858 234 YIEGRFLNVLVQNLGIVLDMAKSLPFPLPLLAVAHQQLISGSSSMQGDDTATSLAKVWEKVFGVNILEAANRELYKPEDL 313 (1378)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHcCCCccccccccccChHHH
Confidence 3334556777788999999999999987655444443 1111 1122100 000 000001222222
Q ss_pred --hhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc-
Q 006607 449 --SLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 523 (639)
Q Consensus 449 --sltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~- 523 (639)
-+|.+ ||..++|-++|-- .+|+++|+.|.+.|.+|.. |+.++.++++++-. ....+.++
T Consensus 314 ~~~~~~~------~~~~~~IGfIGlG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga-------~~~~s~~e~ 377 (1378)
T PLN02858 314 AKQITMQ------AKPVKRIGFIGLG---AMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGG-------LAGNSPAEV 377 (1378)
T ss_pred HHHhhcc------ccCCCeEEEECch---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-------eecCCHHHH
Confidence 22222 3445789999865 9999999999999999998 88888888876511 01223332
Q ss_pred -cceeEEE--EcC------cCC-hh-hhhcCCCCceeecccccCCcCC----------CCCceeecCCccccCCC
Q 006607 524 -HKTKIWL--VGD------DLT-GK-EQARAPKGTIFIPYTQIPPRKL----------RKDCFYHSTPAMIIPPS 577 (639)
Q Consensus 524 -~~~~vwi--vg~------~~~-~~-~q~~a~~G~~f~~~~~~~~~~~----------R~dc~y~~~~a~~~P~~ 577 (639)
+++++++ |.+ .+. +. -...+++|.++++.|-++|... +++..|.+.|.+--|..
T Consensus 378 ~~~aDvVi~~V~~~~~v~~Vl~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lDAPVsGg~~~ 452 (1378)
T PLN02858 378 AKDVDVLVIMVANEVQAENVLFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVKR 452 (1378)
T ss_pred HhcCCEEEEecCChHHHHHHHhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEccCCCChhh
Confidence 5566644 321 111 11 1234589999999999888722 26888999888765553
No 393
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=84.38 E-value=0.77 Score=46.81 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=28.7
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (639)
|+++|++| -||+++++.|.++|.+|.. |+.+..
T Consensus 1 vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~ 35 (292)
T TIGR01777 1 ILITGGTG--FIGRALTQRLTKDGHEVTILTRSPPAG 35 (292)
T ss_pred CEEEcccc--hhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence 68999999 9999999999999999987 655543
No 394
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=84.35 E-value=2.3 Score=43.13 Aligned_cols=86 Identities=13% Similarity=0.128 Sum_probs=52.9
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEec-chhhHHHHHhh-CCcccc--cceeeec-cccc--cceeEEEEc
Q 006607 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI-CKDDYEKLKLR-IPVEAQ--HNLVLST-SYAA--HKTKIWLVG 532 (639)
Q Consensus 460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~-~~~~~~~l~~~-~~~~~~--~~l~~~~-~~~~--~~~~vwivg 532 (639)
+-.-++|+++|... -||+-+|..|.++|-.|++- +..-+..-+.. +..+.. .+ .+ .+++ +.++|+|++
T Consensus 59 ~l~GK~vvVIGrS~--iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~---~~~~l~~~~~~ADIVIsA 133 (197)
T cd01079 59 RLYGKTITIINRSE--VVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTD---EEAMTLDCLSQSDVVITG 133 (197)
T ss_pred CCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccc---hhhHHHHHhhhCCEEEEc
Confidence 45688999999997 99999999999999999982 11111100000 001110 01 01 1333 567777743
Q ss_pred Cc-----CChhhhhcCCCCceeeccc
Q 006607 533 DD-----LTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 533 ~~-----~~~~~q~~a~~G~~f~~~~ 553 (639)
-+ ++++.. ++|+++||+.
T Consensus 134 vG~~~~~i~~d~i---k~GavVIDVG 156 (197)
T cd01079 134 VPSPNYKVPTELL---KDGAICINFA 156 (197)
T ss_pred cCCCCCccCHHHc---CCCcEEEEcC
Confidence 32 455544 9999999998
No 395
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=84.26 E-value=2.6 Score=44.55 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=66.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cc---eeEEE--EcCc-
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HK---TKIWL--VGDD- 534 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~---~~vwi--vg~~- 534 (639)
+|-++|.- .+|+++|+.|.+.|.+|++ |++++.+.+++. +... ..+.++ +. +++++ +-+.
T Consensus 2 ~Ig~IGlG---~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~------~~s~~~~~~~~~~advVi~~vp~~~ 71 (299)
T PRK12490 2 KLGLIGLG---KMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-GITA------RHSLEELVSKLEAPRTIWVMVPAGE 71 (299)
T ss_pred EEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CCee------cCCHHHHHHhCCCCCEEEEEecCch
Confidence 47788854 9999999999999999998 888888888653 2111 113332 21 44544 2221
Q ss_pred -CCh--hhh-hcCCCCceeecccccCCc-------CC-CCCceeecCCccccCCC
Q 006607 535 -LTG--KEQ-ARAPKGTIFIPYTQIPPR-------KL-RKDCFYHSTPAMIIPPS 577 (639)
Q Consensus 535 -~~~--~~q-~~a~~G~~f~~~~~~~~~-------~~-R~dc~y~~~~a~~~P~~ 577 (639)
+.. ++. ..+++|.++++.|.++|. ++ ++.+.|.+.|.+--|..
T Consensus 72 ~~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vdapV~G~~~~ 126 (299)
T PRK12490 72 VTESVIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVWG 126 (299)
T ss_pred HHHHHHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEeCCCCCCHHH
Confidence 111 122 235789999999988876 11 25788999888865543
No 396
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=84.03 E-value=1.6 Score=42.92 Aligned_cols=27 Identities=22% Similarity=0.397 Sum_probs=25.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
|+++|||| =||+++++.|.++|.+|+.
T Consensus 1 IlI~GatG--~iG~~l~~~l~~~g~~v~~ 27 (236)
T PF01370_consen 1 ILITGATG--FIGSALVRQLLKKGHEVIV 27 (236)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTTEEEE
T ss_pred EEEEccCC--HHHHHHHHHHHHcCCcccc
Confidence 78999999 9999999999999999665
No 397
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=83.87 E-value=7.2 Score=41.40 Aligned_cols=28 Identities=14% Similarity=0.164 Sum_probs=25.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+|.+.|+- .+|+++|+.|++.|.+|.+
T Consensus 5 m~I~iiG~G---~~G~~lA~~l~~~G~~V~~ 32 (308)
T PRK14619 5 KTIAILGAG---AWGSTLAGLASANGHRVRV 32 (308)
T ss_pred CEEEEECcc---HHHHHHHHHHHHCCCEEEE
Confidence 468999986 9999999999999999999
No 398
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=83.83 E-value=1.5 Score=47.01 Aligned_cols=138 Identities=22% Similarity=0.299 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh-
Q 006607 394 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS- 449 (639)
Q Consensus 394 ~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns- 449 (639)
+-+.-+....+.|++.|++.. -|. +++.++++|.|- ++.+..= |++++ .+=|||=+
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~ 123 (297)
T PRK14167 44 ASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHP 123 (297)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 444456667778888888764 343 333446788875 4344321 22233 12244443
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHHHH
Q 006607 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLK 504 (639)
Q Consensus 450 ---------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~l~ 504 (639)
-|+.+|++=+ +-.-++|+++|... -||+-+|..|.++ +..|++ .++-
T Consensus 124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T------ 195 (297)
T PRK14167 124 ENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSD--IVGKPMANLLIQKADGGNATVTVCHSRT------ 195 (297)
T ss_pred hhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--ccHHHHHHHHhcCccCCCCEEEEeCCCC------
Confidence 4677766544 44678999999997 9999999999987 788888 2111
Q ss_pred hhCCcccccceeeeccccc--cceeEEEE--cC--cCChhhhhcCCCCceeecccccCC
Q 006607 505 LRIPVEAQHNLVLSTSYAA--HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP 557 (639)
Q Consensus 505 ~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~--~~~~~~q~~a~~G~~f~~~~~~~~ 557 (639)
. ++++ +.++|+|+ |+ .++++.. ++|+++||+. +.+
T Consensus 196 --------~------~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gaiVIDvG-in~ 236 (297)
T PRK14167 196 --------D------DLAAKTRRADIVVAAAGVPELIDGSML---SEGATVIDVG-INR 236 (297)
T ss_pred --------C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence 1 1221 35667663 53 5777666 9999999998 554
No 399
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=83.72 E-value=1.7 Score=46.35 Aligned_cols=64 Identities=20% Similarity=0.306 Sum_probs=43.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCccc---ccc-eeeeccccc-cceeEEEE
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHN-LVLSTSYAA-HKTKIWLV 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~---~~~-l~~~~~~~~-~~~~vwiv 531 (639)
+|.++|+ | .+|+++|..|+++|. ++.+ +++++.+.+..++.... ..+ .+....+++ ++++++|+
T Consensus 2 kI~IIGa-G--~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIi 74 (306)
T cd05291 2 KVVIIGA-G--HVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVI 74 (306)
T ss_pred EEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence 6899997 6 899999999999895 5676 77787777766653321 111 122234555 88888764
No 400
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=83.64 E-value=2.3 Score=48.92 Aligned_cols=41 Identities=24% Similarity=0.395 Sum_probs=36.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+.+|.+||.. ++|+.+|+.|.++|.++++ .|+|+.++++++
T Consensus 417 ~~hiiI~G~G---~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~ 459 (558)
T PRK10669 417 CNHALLVGYG---RVGSLLGEKLLAAGIPLVVIETSRTRVDELRER 459 (558)
T ss_pred CCCEEEECCC---hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC
Confidence 6789999998 9999999999999999998 888888888764
No 401
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=83.57 E-value=4 Score=42.47 Aligned_cols=99 Identities=18% Similarity=0.162 Sum_probs=59.5
Q ss_pred hhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--cc-
Q 006607 449 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY- 521 (639)
Q Consensus 449 sltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~~- 521 (639)
-+||+-.+... .+....|++.|++| .+|.++++.+...|.+|.. +++++.+.+++ ++.+. ++... ++
T Consensus 128 ~~ta~~al~~~~~~~~g~~vlI~ga~g--~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~---vi~~~~~~~~ 201 (329)
T cd08294 128 GLTAYFGLLEICKPKAGETVVVNGAAG--AVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDA---VFNYKTVSLE 201 (329)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCE---EEeCCCccHH
Confidence 34554444322 23457899999998 9999999988899999876 78888888876 44322 12111 11
Q ss_pred ---cc---cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006607 522 ---AA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 522 ---~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
++ ...++++ +|.....+-.+.+++|-+++.+.
T Consensus 202 ~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g 241 (329)
T cd08294 202 EALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCG 241 (329)
T ss_pred HHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEc
Confidence 11 2345555 33322233344556666677665
No 402
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=83.53 E-value=1.6 Score=47.21 Aligned_cols=121 Identities=17% Similarity=0.177 Sum_probs=81.6
Q ss_pred cccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607 423 EELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (639)
Q Consensus 423 e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (639)
|.-||+.++...=.|. -...+|.+.|.- -+|.--|+...--|-+|++ +|-+|+
T Consensus 150 ek~~GG~GvllgGvpG----------------------V~~~kv~iiGGG---vvgtnaAkiA~glgA~Vtild~n~~rl 204 (371)
T COG0686 150 EKTNGGKGVLLGGVPG----------------------VLPAKVVVLGGG---VVGTNAAKIAIGLGADVTILDLNIDRL 204 (371)
T ss_pred HhccCCceeEecCCCC----------------------CCCccEEEECCc---cccchHHHHHhccCCeeEEEecCHHHH
Confidence 3367777766655554 134568888876 7899999999999999999 999999
Q ss_pred HHHHhhCCcccccceeeecc--ccc--cceeEEE---------EcCcCChhhhhcCCCCceeecccccCCc----CCC--
Q 006607 501 EKLKLRIPVEAQHNLVLSTS--YAA--HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR----KLR-- 561 (639)
Q Consensus 501 ~~l~~~~~~~~~~~l~~~~~--~~~--~~~~vwi---------vg~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R-- 561 (639)
..|...-... .....++. +++ ..++++| .=+-++.|.+++|+||++.+|++ ++.- ..|
T Consensus 205 ~~ldd~f~~r--v~~~~st~~~iee~v~~aDlvIgaVLIpgakaPkLvt~e~vk~MkpGsVivDVA-iDqGGc~Et~~~T 281 (371)
T COG0686 205 RQLDDLFGGR--VHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAPKLVTREMVKQMKPGSVIVDVA-IDQGGCFETSHPT 281 (371)
T ss_pred hhhhHhhCce--eEEEEcCHHHHHHHhhhccEEEEEEEecCCCCceehhHHHHHhcCCCcEEEEEE-EcCCCceeccccc
Confidence 9887763332 11123442 543 4555544 22456778899999999999999 7665 223
Q ss_pred --CCceeecCCc
Q 006607 562 --KDCFYHSTPA 571 (639)
Q Consensus 562 --~dc~y~~~~a 571 (639)
+|=+|.+-+.
T Consensus 282 Th~~PtY~~~gv 293 (371)
T COG0686 282 THDDPTYEVDGV 293 (371)
T ss_pred cCCCCceeecCE
Confidence 5555655554
No 403
>PRK13243 glyoxylate reductase; Reviewed
Probab=83.45 E-value=2.1 Score=46.35 Aligned_cols=97 Identities=8% Similarity=0.087 Sum_probs=64.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------ 531 (639)
..++|.++|- | .||+.+|+.|...|.+|.. ++.+... ..+.. +...++++ ++++++++
T Consensus 149 ~gktvgIiG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~-------~~~~~l~ell~~aDiV~l~lP~t~ 216 (333)
T PRK13243 149 YGKTIGIIGF-G--RIGQAVARRAKGFGMRILYYSRTRKPEA--EKELG-------AEYRPLEELLRESDFVSLHVPLTK 216 (333)
T ss_pred CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcC-------CEecCHHHHHhhCCEEEEeCCCCh
Confidence 4678999998 5 9999999999999999988 3322211 11111 11224443 56666552
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecCC
Q 006607 532 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP 570 (639)
Q Consensus 532 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~ 570 (639)
-..++.+....+++|+.++.++| ++.+ +++ -|++..+-+
T Consensus 217 ~T~~~i~~~~~~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gAaLDV~~~EP~ 272 (333)
T PRK13243 217 ETYHMINEERLKLMKPTAILVNTARGKVVDTKALVKALKEGWIAGAGLDVFEEEPY 272 (333)
T ss_pred HHhhccCHHHHhcCCCCeEEEECcCchhcCHHHHHHHHHcCCeEEEEeccCCCCCC
Confidence 23456688899999999999999 4443 222 488877643
No 404
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=83.39 E-value=2 Score=38.20 Aligned_cols=39 Identities=23% Similarity=0.285 Sum_probs=33.1
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (639)
|+++|.. .+|+.+++.|.+.+.+|++ +++++.++++++-
T Consensus 1 vvI~G~g---~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~ 41 (116)
T PF02254_consen 1 VVIIGYG---RIGREIAEQLKEGGIDVVVIDRDPERVEELREEG 41 (116)
T ss_dssp EEEES-S---HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT
T ss_pred eEEEcCC---HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc
Confidence 6789987 9999999999998888888 8888889887773
No 405
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=83.38 E-value=4.3 Score=41.33 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=35.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
.+.|++.|++| .+|.++++.+..+|.+|.+ +++++.+.+++
T Consensus 145 g~~vlI~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 187 (325)
T cd08253 145 GETVLVHGGSG--AVGHAAVQLARWAGARVIATASSAEGAELVRQ 187 (325)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 46899999987 9999999999999999888 77778777743
No 406
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=83.07 E-value=4.2 Score=41.99 Aligned_cols=86 Identities=15% Similarity=0.229 Sum_probs=54.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--c----cc---c-cceeEE
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YA---A-HKTKIW 529 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~---~-~~~~vw 529 (639)
....|++.|++| .+|.++++.+..+|.++.. +++++.+.++ +++.. .++... + ++ . +..+++
T Consensus 138 ~~~~vlI~g~~~--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~v 211 (323)
T cd05282 138 PGDWVIQNAANS--AVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGAD---EVIDSSPEDLAQRVKEATGGAGARLA 211 (323)
T ss_pred CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCC---EEecccchhHHHHHHHHhcCCCceEE
Confidence 457899999998 9999999999999999887 7778888775 33321 111111 1 11 1 345666
Q ss_pred E--EcCcCChhhhhcCCCCceeeccc
Q 006607 530 L--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 530 i--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+ +|.....+-.+.++++-+|+.+.
T Consensus 212 l~~~g~~~~~~~~~~l~~~g~~v~~g 237 (323)
T cd05282 212 LDAVGGESATRLARSLRPGGTLVNYG 237 (323)
T ss_pred EECCCCHHHHHHHHhhCCCCEEEEEc
Confidence 6 33333333444666777777665
No 407
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=82.97 E-value=1.8 Score=45.67 Aligned_cols=40 Identities=13% Similarity=0.287 Sum_probs=35.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
++|.++|+. .+|+++|..|.+.|.+|++ +++++.++++++
T Consensus 5 ~~I~vIGaG---~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 5 QNLAIIGAG---TMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred cEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 579999996 9999999999999999999 788888888764
No 408
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=82.83 E-value=1.4 Score=47.61 Aligned_cols=25 Identities=8% Similarity=0.203 Sum_probs=22.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGI 490 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~ 490 (639)
-+|.++||+| .||+++|..|+.+|+
T Consensus 4 ~KV~IIGa~G--~VG~~~a~~l~~~~~ 28 (323)
T TIGR01759 4 VRVAVTGAAG--QIGYSLLFRIASGEL 28 (323)
T ss_pred eEEEEECCCc--HHHHHHHHHHHhCCc
Confidence 3799999999 999999999997776
No 409
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=82.82 E-value=2.8 Score=43.56 Aligned_cols=101 Identities=18% Similarity=0.123 Sum_probs=61.8
Q ss_pred hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceee--ecc
Q 006607 450 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL--STS 520 (639)
Q Consensus 450 ltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~--~~~ 520 (639)
+||+..++.+. ++...|++.|++| .+|.++++.+..+|.+|.. +++++.+.+++ ++.+.-.+.-. ...
T Consensus 129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~ 205 (326)
T cd08289 129 FTAALSIHRLEENGLTPEQGPVLVTGATG--GVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKEVIPREELQEES 205 (326)
T ss_pred HHHHHHHHHHHhcCCCCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCEEEcchhHHHHH
Confidence 35555554432 2456899999998 9999999999999999887 78888888854 44321111000 001
Q ss_pred ccc---cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006607 521 YAA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 521 ~~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+++ ..+++++ +|.....+-...++++-+++.+.
T Consensus 206 ~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g 243 (326)
T cd08289 206 IKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSG 243 (326)
T ss_pred HHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEe
Confidence 111 3356666 33333334455667777788876
No 410
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=82.63 E-value=3.8 Score=41.54 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=35.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
....|++.|++| .+|.++++.+...|.++.+ +++++.+.+++
T Consensus 139 ~~~~vlv~g~~~--~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 182 (323)
T cd05276 139 AGETVLIHGGAS--GVGTAAIQLAKALGARVIATAGSEEKLEACRA 182 (323)
T ss_pred CCCEEEEEcCcC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 356899999997 9999999999999999887 77778877743
No 411
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=82.53 E-value=3.5 Score=44.67 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=61.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCc---
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD--- 534 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~--- 534 (639)
..++|.++|.. .||+++|+.|...|.+|.. ++.+..... + ....++++ ++++++++--.
T Consensus 145 ~g~~VgIIG~G---~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~---~--------~~~~~l~ell~~aDiVil~lP~t~ 210 (330)
T PRK12480 145 KNMTVAIIGTG---RIGAATAKIYAGFGATITAYDAYPNKDLDF---L--------TYKDSVKEAIKDADIISLHVPANK 210 (330)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEeCChhHhhhh---h--------hccCCHHHHHhcCCEEEEeCCCcH
Confidence 34579999986 9999999999999999999 333221100 0 01224543 66666553333
Q ss_pred -----CChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006607 535 -----LTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 535 -----~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
+..+...++++|++++.++| ++.. +++ -|++..+-
T Consensus 211 ~t~~li~~~~l~~mk~gavlIN~aRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP 265 (330)
T PRK12480 211 ESYHLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEA 265 (330)
T ss_pred HHHHHHhHHHHhcCCCCcEEEEcCCccccCHHHHHHHHHcCCeeEEEEeccCCCC
Confidence 34467778999999999999 5544 222 47777664
No 412
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=82.35 E-value=1.5 Score=47.49 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=21.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGI 490 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~ 490 (639)
+|.++||+| .||+.+|..|+.+|+
T Consensus 2 KV~IiGAaG--~VG~~~a~~L~~~~~ 25 (323)
T cd00704 2 HVLITGAAG--QIGYNLLFLIASGEL 25 (323)
T ss_pred EEEEECCCc--HHHHHHHHHHHhCCc
Confidence 689999999 999999999997664
No 413
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=82.34 E-value=2.6 Score=48.41 Aligned_cols=100 Identities=20% Similarity=0.224 Sum_probs=65.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--------
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------- 531 (639)
..++|.++|-- .||+++|+.|...|.+|...++..-.+-..+.+.. .+.++++ ++++++++
T Consensus 137 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~------~~~~l~ell~~aDvV~l~lPlt~~T 207 (525)
T TIGR01327 137 YGKTLGVIGLG---RIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGVE------LVDDLDELLARADFITVHTPLTPET 207 (525)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCE------EcCCHHHHHhhCCEEEEccCCChhh
Confidence 45789999985 99999999999999999883221101111111111 1234554 66776552
Q ss_pred cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecCC
Q 006607 532 GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP 570 (639)
Q Consensus 532 g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~ 570 (639)
-..++.+...++++|++++.++| ++.. +++ -|++..+-|
T Consensus 208 ~~li~~~~l~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gAaLDVf~~EP~ 261 (525)
T TIGR01327 208 RGLIGAEELAKMKKGVIIVNCARGGIIDEAALYEALEEGHVRAAALDVFEKEPP 261 (525)
T ss_pred ccCcCHHHHhcCCCCeEEEEcCCCceeCHHHHHHHHHcCCeeEEEEecCCCCCC
Confidence 23456788999999999999999 4433 444 677776643
No 414
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=82.16 E-value=1.4 Score=48.34 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=32.5
Q ss_pred hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecch
Q 006607 457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (639)
Q Consensus 457 ~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~ 497 (639)
+.++++..+|.++|.+| .+|..+|+.|.+.|..|.+.+.
T Consensus 92 ~~~~~~~~~I~IiGG~G--lmG~slA~~l~~~G~~V~~~d~ 130 (374)
T PRK11199 92 KTLNPDLRPVVIVGGKG--QLGRLFAKMLTLSGYQVRILEQ 130 (374)
T ss_pred cccCcccceEEEEcCCC--hhhHHHHHHHHHCCCeEEEeCC
Confidence 33444667899999999 9999999999999999999443
No 415
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=82.13 E-value=4.1 Score=42.82 Aligned_cols=148 Identities=8% Similarity=0.113 Sum_probs=83.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE-----
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----- 530 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~----~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----- 530 (639)
.+|.++|. | .+|.++++.|.+.|. ++.. |++++.++++++.+.+. .++.++ ++++++|
T Consensus 3 ~~IgfIG~-G--~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~------~~~~~e~~~~aDiIiLavkP 73 (272)
T PRK12491 3 KQIGFIGC-G--NMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITI------TTNNNEVANSADILILSIKP 73 (272)
T ss_pred CeEEEECc-c--HHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEE------eCCcHHHHhhCCEEEEEeCh
Confidence 46899995 4 999999999998774 5666 77888888876543211 123332 5666655
Q ss_pred --EcCcCChhhhh-cCCCCceeecccc-cCCcCCCC----Cc--e--eecCCc-------cccCC-------------CC
Q 006607 531 --VGDDLTGKEQA-RAPKGTIFIPYTQ-IPPRKLRK----DC--F--YHSTPA-------MIIPP-------------SL 578 (639)
Q Consensus 531 --vg~~~~~~~q~-~a~~G~~f~~~~~-~~~~~~R~----dc--~--y~~~~a-------~~~P~-------------~~ 578 (639)
+.+.+ ++.. ..++|++++++.- ++.+++++ .| . .|.+|+ ...|+ =+
T Consensus 74 ~~~~~vl--~~l~~~~~~~~lvISi~AGi~i~~l~~~l~~~~~vvR~MPN~~~~vg~g~t~~~~~~~~~~~~~~~v~~lf 151 (272)
T PRK12491 74 DLYSSVI--NQIKDQIKNDVIVVTIAAGKSIKSTENEFDRKLKVIRVMPNTPVLVGEGMSALCFNEMVTEKDIKEVLNIF 151 (272)
T ss_pred HHHHHHH--HHHHHhhcCCcEEEEeCCCCcHHHHHHhcCCCCcEEEECCChHHHHcCceEEEEeCCCCCHHHHHHHHHHH
Confidence 22222 1221 1456788888765 44442221 11 1 111111 11121 13
Q ss_pred ccccccccccCcchhhhHHHHHHHHHhcCCCCCccch-h-hhhHHHHHHHHHhcCCcc
Q 006607 579 SNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQ-T-MCDIHQVWHASLRHGFRP 634 (639)
Q Consensus 579 ~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~e~G~-i-v~~i~~iw~aa~kHGF~p 634 (639)
+-++.| .+++.+++.|+.|- .-||. - -.=||..-+++.+.||..
T Consensus 152 ~~~G~~-~~~~E~~~d~~tal-----------sgsgPAf~~~~~eal~~a~v~~Gl~~ 197 (272)
T PRK12491 152 NIFGQT-EVVNEKLMDVVTSI-----------SGSSPAYVYMFIEAMADAAVLGGMPR 197 (272)
T ss_pred HcCCCE-EEEcHHHhhhHHHh-----------ccCcHHHHHHHHHHHHHHHHHcCCCH
Confidence 444445 46666666665442 13665 3 467778888888888764
No 416
>PLN00016 RNA-binding protein; Provisional
Probab=82.09 E-value=1.3 Score=48.01 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=32.4
Q ss_pred cCCCcEEEEe----cccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607 460 PKTTAHVLLR----GTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (639)
Q Consensus 460 ~~~~~~V~~~----Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (639)
....++|+|+ |+|| -||+.+++.|.++|.+|+. |+++.
T Consensus 49 ~~~~~~VLVt~~~~GatG--~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHA--FIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred ccccceEEEEeccCCCce--eEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 3456789999 9999 9999999999999999998 65543
No 417
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=82.04 E-value=2.8 Score=45.16 Aligned_cols=139 Identities=21% Similarity=0.272 Sum_probs=77.4
Q ss_pred HcCCcEEEeccc-ccc---cccccCCceeeecCCCCcceeeecCChh-----HHHHHHhc---CcCCCcEEEEecccCch
Q 006607 408 AKGVKVISLGLL-NQG---EELNRNGEIYLERQPNKLKIKVVDGSSL-----AAAVVVNS---LPKTTAHVLLRGTVTAN 475 (639)
Q Consensus 408 ~~G~kv~~LG~l-n~~---e~ln~~g~~~~~k~p~~L~irvv~Gnsl-----taa~v~~~---i~~~~~~V~~~Gatg~~ 475 (639)
+-|=+|+.+|.. ..+ |-.+-+.. .+.+.|++|. ....-++ ||+..+.+ ++. ..+|++.||+|
T Consensus 80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~-~~~~~P~~ls--~~eAAal~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaG-- 153 (326)
T COG0604 80 KVGDRVAALGGVGRDGGYAEYVVVPAD-WLVPLPDGLS--FEEAAALPLAGLTAWLALFDRAGLKP-GETVLVHGAAG-- 153 (326)
T ss_pred CCCCEEEEccCCCCCCcceeEEEecHH-HceeCCCCCC--HHHHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEecCCc--
Confidence 567788887511 011 33333333 2334465222 2223333 77777777 222 67899999998
Q ss_pred hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccc-----ee-eeccccc-cceeEEE--EcCcCChhhhhcCC
Q 006607 476 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN-----LV-LSTSYAA-HKTKIWL--VGDDLTGKEQARAP 544 (639)
Q Consensus 476 kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~-----l~-~~~~~~~-~~~~vwi--vg~~~~~~~q~~a~ 544 (639)
-||++..+.+...|..+.. .++++.+ +.+++......+ ++ ++..+.. +..++++ ||...-.+-.....
T Consensus 154 gVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~ 232 (326)
T COG0604 154 GVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALA 232 (326)
T ss_pred hHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhc
Confidence 9999999999999854333 6677777 445555543222 12 1222221 4567766 55544444444455
Q ss_pred CCceeeccc
Q 006607 545 KGTIFIPYT 553 (639)
Q Consensus 545 ~G~~f~~~~ 553 (639)
+|-.++.+-
T Consensus 233 ~~G~lv~ig 241 (326)
T COG0604 233 PGGRLVSIG 241 (326)
T ss_pred cCCEEEEEe
Confidence 555555544
No 418
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=81.66 E-value=1.3 Score=47.56 Aligned_cols=97 Identities=15% Similarity=0.205 Sum_probs=62.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc--------
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-------- 532 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-------- 532 (639)
.++|.++|-- +||+++|+.|..-|.+|...++.+ +..+ +.... ....++++ ++++++++-
T Consensus 136 g~tvgIvG~G---~IG~~vA~~l~afG~~V~~~~~~~-----~~~~-~~~~~-~~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 136 DFTIGILGAG---VLGSKVAQSLQTWGFPLRCWSRSR-----KSWP-GVQSF-AGREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCC-----CCCC-Cceee-cccccHHHHHhcCCEEEECCCCCHHHH
Confidence 4688899876 999999999999999998822211 0000 10000 11223543 677776632
Q ss_pred CcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006607 533 DDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 533 ~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
..++.+...++++|++++.++| |+.+ ++| -|++..+-
T Consensus 206 ~li~~~~l~~mk~ga~lIN~aRG~vVde~aL~~aL~~g~i~gaalDVf~~EP 257 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFSREP 257 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECCCccccCHHHHHHHHhcCCeeeEEecCCCCCC
Confidence 2345567889999999999999 5544 344 48877663
No 419
>PLN02996 fatty acyl-CoA reductase
Probab=81.61 E-value=1.5 Score=49.94 Aligned_cols=25 Identities=12% Similarity=0.272 Sum_probs=22.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQM 488 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~ 488 (639)
+.+.|+|+|||| -||++++..|.+.
T Consensus 10 ~~k~VlvTGaTG--FlG~~ll~~LL~~ 34 (491)
T PLN02996 10 ENKTILVTGATG--FLAKIFVEKILRV 34 (491)
T ss_pred CCCeEEEeCCCc--HHHHHHHHHHHhh
Confidence 456899999999 9999999998864
No 420
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=81.60 E-value=1.6 Score=45.87 Aligned_cols=26 Identities=19% Similarity=0.305 Sum_probs=23.1
Q ss_pred EEecccCchhhHHHHHHHHhccC--cEEEe
Q 006607 467 LLRGTVTANKVANAVASSLCQMG--IKVAT 494 (639)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~--~~v~~ 494 (639)
+|+|++| =||+.+++.|.++| .+|..
T Consensus 1 LVTGgsG--flG~~iv~~Ll~~g~~~~Vr~ 28 (280)
T PF01073_consen 1 LVTGGSG--FLGSHIVRQLLERGYIYEVRV 28 (280)
T ss_pred CEEcCCc--HHHHHHHHHHHHCCCceEEEE
Confidence 5899999 99999999999999 56665
No 421
>KOG2380 consensus Prephenate dehydrogenase (NADP+) [Amino acid transport and metabolism]
Probab=81.59 E-value=2.6 Score=46.07 Aligned_cols=139 Identities=18% Similarity=0.248 Sum_probs=86.6
Q ss_pred eeecCCCCcceeeecCChhHHHHHH-hcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCC
Q 006607 432 YLERQPNKLKIKVVDGSSLAAAVVV-NSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIP 508 (639)
Q Consensus 432 ~~~k~p~~L~irvv~Gnsltaa~v~-~~i~~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~ 508 (639)
+..--|.-|++|-.|--+.+-+.+. +++.+ .+.+|.++|=. +.|+-.|..|-+.|-.+..-++++|+++++..+
T Consensus 18 ~~~~~p~~~~~~a~~~~~i~d~~~~~~s~~~~k~tl~IaIIGfG---nmGqflAetli~aGh~li~hsRsdyssaa~~yg 94 (480)
T KOG2380|consen 18 FLISPPRSLRIRAIDAAQIFDYMVSEDSIEQWKATLVIAIIGFG---NMGQFLAETLIDAGHGLICHSRSDYSSAAEKYG 94 (480)
T ss_pred eeccCcHHHHHHhhhhhhhhhcccCcchhhhcccceEEEEEecC---cHHHHHHHHHHhcCceeEecCcchhHHHHHHhc
Confidence 3444444455666654444443332 22222 46678888865 899999999999999999966677999999977
Q ss_pred cccccceeeeccccccceeEEEEcCcC-Chhh------hhcCCCCceeecccc--cCCc-----CCCCCceeecCCcccc
Q 006607 509 VEAQHNLVLSTSYAAHKTKIWLVGDDL-TGKE------QARAPKGTIFIPYTQ--IPPR-----KLRKDCFYHSTPAMII 574 (639)
Q Consensus 509 ~~~~~~l~~~~~~~~~~~~vwivg~~~-~~~~------q~~a~~G~~f~~~~~--~~~~-----~~R~dc~y~~~~a~~~ 574 (639)
...=.+ ..++-++..++++.-.-+ +-|. -.+...||+|.++.. -|++ -+-+||-.+.+-.|-=
T Consensus 95 ~~~ft~---lhdlcerhpDvvLlctsilsiekilatypfqrlrrgtlfvdvlSvKefek~lfekYLPkdfDIlctHpmfG 171 (480)
T KOG2380|consen 95 SAKFTL---LHDLCERHPDVVLLCTSILSIEKILATYPFQRLRRGTLFVDVLSVKEFEKELFEKYLPKDFDILCTHPMFG 171 (480)
T ss_pred cccccc---HHHHHhcCCCEEEEEehhhhHHHHHHhcCchhhccceeEeeeeecchhHHHHHHHhCccccceEeecCCcC
Confidence 655222 111223566665521111 1111 113477899988765 2333 2349999999998887
Q ss_pred CC
Q 006607 575 PP 576 (639)
Q Consensus 575 P~ 576 (639)
|+
T Consensus 172 Pk 173 (480)
T KOG2380|consen 172 PK 173 (480)
T ss_pred CC
Confidence 77
No 422
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=81.59 E-value=2.3 Score=50.76 Aligned_cols=42 Identities=12% Similarity=0.124 Sum_probs=35.4
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (639)
|++-++|.|+||- -+|+.||..+++.|++|++ .+.+.+++-+
T Consensus 310 ~~~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~ 353 (714)
T TIGR02437 310 AKDVKQAAVLGAG---IMGGGIAYQSASKGTPIVMKDINQHSLDLGL 353 (714)
T ss_pred ccccceEEEECCc---hHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 4567789999998 8999999999999999999 7777766543
No 423
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=81.59 E-value=6.3 Score=44.42 Aligned_cols=166 Identities=17% Similarity=0.243 Sum_probs=98.5
Q ss_pred HHHHHHHHHHcCCcEEEecc-----cccccc-------cccCCceeeecCCC---------CcceeeecCCh--------
Q 006607 399 IEEAILEADAKGVKVISLGL-----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS-------- 449 (639)
Q Consensus 399 I~~Ai~~A~~~G~kv~~LG~-----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns-------- 449 (639)
-|.|+ .++|.+++.|+. +.++|. |++..-+.+.|+|. ..+|+|+.|-+
T Consensus 144 FE~A~---~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y~D~IviR~~~~~~~~e~A~~s~vPVINAgdg~~~HPtQ 220 (429)
T PRK11891 144 FGAAF---CRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGYVDALVIRHPEQGSVAEFARATNLPVINGGDGPGEHPSQ 220 (429)
T ss_pred HHHHH---HHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHhCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHH
Confidence 45554 489999999954 344554 45667778888876 46789998643
Q ss_pred --hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCCcccccceeee
Q 006607 450 --LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLS 518 (639)
Q Consensus 450 --ltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~ 518 (639)
+=..++.+..+ .+..+|+++|...-+.+++..+..||+. |.+|.+-.++.|+ .+.+++. +.+.. +.+
T Consensus 221 aLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~~~~~~~~~~~~-~~G~~-v~~ 298 (429)
T PRK11891 221 ALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTLEMPAYIVEQIS-RNGHV-IEQ 298 (429)
T ss_pred HHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCccccCHHHHHHHH-hcCCe-EEE
Confidence 22556666542 2357999999972228899999999975 9999983434332 2222211 12333 333
Q ss_pred c-ccc-c-cceeEEEEcCcCChhhhhcCCCCceeecccccCCc---C-CCCCce-eecCCc
Q 006607 519 T-SYA-A-HKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR---K-LRKDCF-YHSTPA 571 (639)
Q Consensus 519 ~-~~~-~-~~~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~---~-~R~dc~-y~~~~a 571 (639)
+ +.+ + ++++|+...- +..|+......-..+-+| |++.+ . .++||. .|.+|+
T Consensus 299 ~~d~~eav~~ADVVYt~~-~q~er~~~~~~~~~~~~y-~vt~ell~~~ak~dai~MHcLPr 357 (429)
T PRK11891 299 TDDLAAGLRGADVVYATR-IQKERFADESFEGYTPDF-QINQALVDAVCKPDTLIMHPLPR 357 (429)
T ss_pred EcCHHHHhCCCCEEEEcC-chhhcccCHHHHHhccCC-cCCHHHHhCccCCCcEEECCCCC
Confidence 3 455 4 8888888743 332222100001123344 38877 3 467877 567885
No 424
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=81.55 E-value=2.9 Score=49.09 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=39.0
Q ss_pred CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (639)
Q Consensus 459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (639)
+++.+++|.++|.. .+|+.+|+.|.++|+++++ .|+++.++++++
T Consensus 396 ~~~~~~~vII~G~G---r~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~ 442 (621)
T PRK03562 396 IDEQQPRVIIAGFG---RFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF 442 (621)
T ss_pred cccccCcEEEEecC---hHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc
Confidence 33446789999998 9999999999999999988 888899988764
No 425
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=81.41 E-value=3 Score=45.32 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=28.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
...|+|+|+.| =||+.++..|-++|..|++
T Consensus 2 ~~~VLVtGgaG--yiGsht~l~L~~~gy~v~~ 31 (343)
T KOG1371|consen 2 GKHVLVTGGAG--YIGSHTVLALLKRGYGVVI 31 (343)
T ss_pred CcEEEEecCCc--ceehHHHHHHHhCCCcEEE
Confidence 46899999999 9999999999999999999
No 426
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=81.31 E-value=5.3 Score=41.37 Aligned_cols=89 Identities=13% Similarity=0.132 Sum_probs=54.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccc------ee-eeccccc-cceeEEE-
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN------LV-LSTSYAA-HKTKIWL- 530 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~------l~-~~~~~~~-~~~~vwi- 530 (639)
....|++.|+.| -+|.++++.+..+|.++.. +++++.+.+++ .+.+.-.+ +. ++..... +..++++
T Consensus 140 ~~~~vlI~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 216 (334)
T PTZ00354 140 KGQSVLIHAGAS--GVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-LAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLD 216 (334)
T ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCChhHHHHHHHHHhCCCCceEEEE
Confidence 346899999998 9999999999999999766 88888888854 33211000 00 0111111 3445555
Q ss_pred -EcCcCChhhhhcCCCCceeeccc
Q 006607 531 -VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 531 -vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+|.....+-.+.+++|-.|+.+.
T Consensus 217 ~~~~~~~~~~~~~l~~~g~~i~~~ 240 (334)
T PTZ00354 217 CVGGSYLSETAEVLAVDGKWIVYG 240 (334)
T ss_pred CCchHHHHHHHHHhccCCeEEEEe
Confidence 23233344455667777787765
No 427
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=81.22 E-value=5.5 Score=40.79 Aligned_cols=100 Identities=15% Similarity=0.071 Sum_probs=59.9
Q ss_pred hHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccc----cee-eecc
Q 006607 450 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH----NLV-LSTS 520 (639)
Q Consensus 450 ltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~----~l~-~~~~ 520 (639)
+||+..++.+- +....|++.|++| .+|.++++.+..+|.+|.. +++++.+.++ +++.+.-. .+. .+..
T Consensus 128 ~ta~~~l~~~~~~~~g~~vlV~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~i~~ 204 (320)
T cd08243 128 YTAWGSLFRSLGLQPGDTLLIRGGTS--SVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVIDDGAIAEQLRA 204 (320)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEecCccHHHHHHH
Confidence 44555554442 2346999999998 9999999999999999877 6777777774 33321100 000 0111
Q ss_pred ccccceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006607 521 YAAHKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 521 ~~~~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+ .+..++++ +|.....+-.+..+++-+|+.+.
T Consensus 205 ~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g 238 (320)
T cd08243 205 A-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTG 238 (320)
T ss_pred h-CCCceEEEECCChHHHHHHHHHhccCCEEEEEc
Confidence 1 12345555 33333344455667777777766
No 428
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=81.10 E-value=5.9 Score=41.16 Aligned_cols=88 Identities=14% Similarity=0.165 Sum_probs=55.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--c----ccc---cceeEEE-
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YAA---HKTKIWL- 530 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~~---~~~~vwi- 530 (639)
...|++.|++| .+|.++++.+.+.|.+|.. ++.++.+.++++++... .+... + +.+ ...++++
T Consensus 146 ~~~vlI~g~~g--~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~v~~~~~~~~d~vi~ 220 (329)
T cd05288 146 GETVVVSAAAG--AVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDA---AINYKTPDLAEALKEAAPDGIDVYFD 220 (329)
T ss_pred CCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCce---EEecCChhHHHHHHHhccCCceEEEE
Confidence 47899999987 9999999999999999877 77788887776444321 11111 1 111 2345555
Q ss_pred -EcCcCChhhhhcCCCCceeeccccc
Q 006607 531 -VGDDLTGKEQARAPKGTIFIPYTQI 555 (639)
Q Consensus 531 -vg~~~~~~~q~~a~~G~~f~~~~~~ 555 (639)
+|...-.+-.+.++++-+++.+...
T Consensus 221 ~~g~~~~~~~~~~l~~~G~~v~~g~~ 246 (329)
T cd05288 221 NVGGEILDAALTLLNKGGRIALCGAI 246 (329)
T ss_pred cchHHHHHHHHHhcCCCceEEEEeec
Confidence 3332223334456677778877643
No 429
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=80.79 E-value=6.6 Score=40.54 Aligned_cols=43 Identities=21% Similarity=0.311 Sum_probs=35.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (639)
...|++.|++| .+|.++++.+...|.+|.+ +++++.+.++ +++
T Consensus 147 ~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g 191 (325)
T cd05280 147 DGPVLVTGATG--GVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLG 191 (325)
T ss_pred CCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC
Confidence 45899999998 9999999888899999876 7788888774 344
No 430
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=80.55 E-value=1.8 Score=39.73 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=26.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKD 498 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~ 498 (639)
+.++++|++| -||+++++.|+++|. .|.+ |+++
T Consensus 1 ~~~li~Ga~~--~iG~~~~~~l~~~g~~~v~~~~r~~~ 36 (180)
T smart00822 1 GTYLITGGLG--GLGLELARWLAERGARHLVLLSRSGP 36 (180)
T ss_pred CEEEEEcCCC--hHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence 3689999998 999999999999886 5655 5443
No 431
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=80.29 E-value=6.9 Score=40.46 Aligned_cols=42 Identities=19% Similarity=0.168 Sum_probs=35.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
....|++.|++| .+|.++++.+...|.+|.. ++.++.+.+++
T Consensus 162 ~~~~vlI~ga~g--~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 205 (332)
T cd08259 162 KGDTVLVTGAGG--GVGIHAIQLAKALGARVIAVTRSPEKLKILKE 205 (332)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 355799999998 9999999999999999877 77777777744
No 432
>PRK05442 malate dehydrogenase; Provisional
Probab=80.26 E-value=1.6 Score=47.23 Aligned_cols=26 Identities=8% Similarity=0.204 Sum_probs=22.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCc
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGI 490 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~ 490 (639)
-.+|.++||+| .||+.+|..|+.+|+
T Consensus 4 ~~KV~IiGaaG--~VG~~~a~~l~~~~~ 29 (326)
T PRK05442 4 PVRVAVTGAAG--QIGYSLLFRIASGDM 29 (326)
T ss_pred CcEEEEECCCc--HHHHHHHHHHHhhhh
Confidence 34899999998 999999999997666
No 433
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=80.16 E-value=2.7 Score=45.87 Aligned_cols=129 Identities=12% Similarity=0.141 Sum_probs=70.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCc---EEEe----cchhhHHHHHhhCCcccccceeeecccc--c-cceeEEE-
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGI---KVAT----ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL- 530 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~---~v~~----~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~-~~~~vwi- 530 (639)
...+|+++|||| .+|+.+.+.|.+++. ++.. |+.++-... ...+++ +.++. + +++++++
T Consensus 6 ~~~kVaVvGAtG--~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~-------~~~~~~-v~~~~~~~~~~~D~vf~ 75 (344)
T PLN02383 6 NGPSVAIVGVTG--AVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF-------EGRDYT-VEELTEDSFDGVDIALF 75 (344)
T ss_pred CCCeEEEEcCCC--hHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee-------cCceeE-EEeCCHHHHcCCCEEEE
Confidence 345899999999 999999999997654 3322 222211111 112222 22222 2 5667655
Q ss_pred -EcCcCChhhhhcC-CCCceeecccccCCc-CCCCCceeecCCccccCCCC-cccccccccc-Ccchhhh--HHHHHHHH
Q 006607 531 -VGDDLTGKEQARA-PKGTIFIPYTQIPPR-KLRKDCFYHSTPAMIIPPSL-SNMHSCENWL-GRRVMSA--WRIAGIIH 603 (639)
Q Consensus 531 -vg~~~~~~~q~~a-~~G~~f~~~~~~~~~-~~R~dc~y~~~~a~~~P~~~-~~~~~~e~~~-pr~~~~A--c~a~~~v~ 603 (639)
+|...+.+--.++ .+|+.+||.|- . .+++|+. ..+|+-- +.+..-+..- +++.+.- |.+-++++
T Consensus 76 a~p~~~s~~~~~~~~~~g~~VIDlS~---~fR~~~~~p------~~vPEvn~~~i~~~~~~~~~~~iIanPgC~~t~~~l 146 (344)
T PLN02383 76 SAGGSISKKFGPIAVDKGAVVVDNSS---AFRMEEGVP------LVIPEVNPEAMKHIKLGKGKGALIANPNCSTIICLM 146 (344)
T ss_pred CCCcHHHHHHHHHHHhCCCEEEECCc---hhhcCCCCc------eECCCcCHHHHHhhhhcccCCcEEECCCcHHHHHHH
Confidence 6777666655444 67999998882 1 3334443 3355521 1111000000 1233333 99999998
Q ss_pred HhcCCC
Q 006607 604 ALEGWD 609 (639)
Q Consensus 604 alEgw~ 609 (639)
+|=-..
T Consensus 147 aL~PL~ 152 (344)
T PLN02383 147 AVTPLH 152 (344)
T ss_pred HHHHHH
Confidence 875553
No 434
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=80.10 E-value=7.9 Score=43.19 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=59.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccc-------------cceeeeccccccceeE
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-------------HNLVLSTSYAAHKTKI 528 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~-------------~~l~~~~~~~~~~~~v 528 (639)
.+|.++|.. .+|...|..|+++|.+|+. +++++.+.+++....... ..+...+.. +++++
T Consensus 4 ~kI~VIGlG---~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~--~~aDv 78 (415)
T PRK11064 4 ETISVIGLG---YIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTP--EPADA 78 (415)
T ss_pred cEEEEECcc---hhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeeccc--ccCCE
Confidence 579999985 9999999999999999998 889999988755221111 111111112 34544
Q ss_pred --EEEcCcCCh-------------hh-hhcCCCCceeecccccCCc
Q 006607 529 --WLVGDDLTG-------------KE-QARAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 529 --wivg~~~~~-------------~~-q~~a~~G~~f~~~~~~~~~ 558 (639)
.-|+...++ ++ ...+++|++++.-|-+||.
T Consensus 79 vii~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pg 124 (415)
T PRK11064 79 FLIAVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSPVG 124 (415)
T ss_pred EEEEcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 336653211 11 2346899999999988886
No 435
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=80.00 E-value=18 Score=39.35 Aligned_cols=168 Identities=19% Similarity=0.228 Sum_probs=99.1
Q ss_pred HHHHHHHHHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh---------
Q 006607 399 IEEAILEADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS--------- 449 (639)
Q Consensus 399 I~~Ai~~A~~~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns--------- 449 (639)
-|.|+ .++|.+++.|+. +.++|. |++..-+.+.|+|+ ..+++|+.|.+
T Consensus 63 Fe~A~---~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iviR~~~~~~~~~~a~~s~vPVINa~~~~~HPtQaL 139 (332)
T PRK04284 63 FEVAA---YDQGAHVTYLGPTGSQMGKKESTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVL 139 (332)
T ss_pred HHHHH---HHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEecCchHHHHHHHHhCCCCEEECCCCCCChHHHH
Confidence 44444 569999999965 334554 35566677788877 35688988754
Q ss_pred hHHHHHHhcC-c-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCCcccccceeeecc
Q 006607 450 LAAAVVVNSL-P-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLSTS 520 (639)
Q Consensus 450 ltaa~v~~~i-~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~-------~~l~~~~~~~~~~~l~~~~~ 520 (639)
+=..++.+.. . -+..+|+++|... +.+++..+..|++-|.++.+-.++.+ ++.++ ...+.+......++
T Consensus 140 ~Dl~Ti~e~~~g~l~g~kia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~-~~~~~g~~~~~~~d 217 (332)
T PRK04284 140 ADFLTAKEHLKKPYKDIKFTYVGDGR-NNVANALMQGAAIMGMDFHLVCPKELNPDDELLNKCKE-IAAETGGKITITDD 217 (332)
T ss_pred HHHHHHHHHhcCCcCCcEEEEecCCC-cchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHH-HHHHcCCeEEEEcC
Confidence 1245666663 2 2457999999862 37999999999999999999333322 22221 11223333122335
Q ss_pred cc-c-cceeEEEEcCcCChhhhhc--CCCCceeecccccCCc---CCC-CCce-eecCCcc
Q 006607 521 YA-A-HKTKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR---KLR-KDCF-YHSTPAM 572 (639)
Q Consensus 521 ~~-~-~~~~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~---~~R-~dc~-y~~~~a~ 572 (639)
++ + ++++|+..+.|.+..+... ...-..|-+| |++++ ..+ +|+. .|.+|+.
T Consensus 218 ~~ea~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~~y-~v~~e~l~~a~~~~~ivmHplP~~ 277 (332)
T PRK04284 218 IDEGVKGSDVIYTDVWVSMGEPDEVWEERIKLLKPY-QVNKEMMKKTGNPNAIFEHCLPSF 277 (332)
T ss_pred HHHHhCCCCEEEECCcccCccchhhHHHHHHhccCC-cCCHHHHhhcCCCCcEEECCCCCC
Confidence 65 4 7888877765543221100 0000123344 37777 345 4776 5888864
No 436
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=79.92 E-value=4.4 Score=42.81 Aligned_cols=99 Identities=14% Similarity=0.111 Sum_probs=61.9
Q ss_pred hHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec---c--
Q 006607 450 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---S-- 520 (639)
Q Consensus 450 ltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~---~-- 520 (639)
+||+..+... .+..+.|++.|++| -||.++++.+..+|.+|.. +++++.+.++++++.+. .+..+ +
T Consensus 137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G--~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~ 211 (338)
T cd08295 137 LTAYAGFYEVCKPKKGETVFVSAASG--AVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD---AFNYKEEPDLD 211 (338)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce---eEEcCCcccHH
Confidence 4555555332 23457899999998 9999999988899999876 78889888887544322 11111 1
Q ss_pred --ccc---cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006607 521 --YAA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 521 --~~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+++ ...++++ +|....++-.....+|-.++.+.
T Consensus 212 ~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G 251 (338)
T cd08295 212 AALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACG 251 (338)
T ss_pred HHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEec
Confidence 111 2345555 44333334445566777777766
No 437
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=79.85 E-value=5.5 Score=42.16 Aligned_cols=85 Identities=13% Similarity=0.218 Sum_probs=53.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCcCCh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLTG 537 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~~ 537 (639)
.+|.++| .| .+|+++|+.|.+.|. +|.. +++++.+.+++. +... . ...+.++ ++++++|+--....
T Consensus 7 ~~I~IIG-~G--~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~-g~~~--~--~~~~~~~~~~~aDvViiavp~~~ 78 (307)
T PRK07502 7 DRVALIG-IG--LIGSSLARAIRRLGLAGEIVGADRSAETRARAREL-GLGD--R--VTTSAAEAVKGADLVILCVPVGA 78 (307)
T ss_pred cEEEEEe-eC--HHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhC-CCCc--e--ecCCHHHHhcCCCEEEECCCHHH
Confidence 4799999 56 999999999998885 6776 777777776543 1100 0 1123432 67777664222211
Q ss_pred -----hhh-hcCCCCceeecccccC
Q 006607 538 -----KEQ-ARAPKGTIFIPYTQIP 556 (639)
Q Consensus 538 -----~~q-~~a~~G~~f~~~~~~~ 556 (639)
++. ..+++|+++++++-+.
T Consensus 79 ~~~v~~~l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 79 SGAVAAEIAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHHHHHHHHhhCCCCCEEEeCccch
Confidence 112 2357888888887644
No 438
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=79.84 E-value=5.5 Score=44.14 Aligned_cols=84 Identities=17% Similarity=0.102 Sum_probs=58.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcC------
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD------ 533 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~------ 533 (639)
..++|-++|.- .||+++|+.|..-|.+|+..++.+-+ + +.. ....++++ +.++++++--
T Consensus 115 ~gktvGIIG~G---~IG~~vA~~l~a~G~~V~~~dp~~~~----~---~~~---~~~~~L~ell~~sDiI~lh~PLt~~g 181 (378)
T PRK15438 115 HDRTVGIVGVG---NVGRRLQARLEALGIKTLLCDPPRAD----R---GDE---GDFRSLDELVQEADILTFHTPLFKDG 181 (378)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCcccc----c---ccc---cccCCHHHHHhhCCEEEEeCCCCCCc
Confidence 57899999985 99999999999999999994332111 0 110 11234554 5676655222
Q ss_pred ------cCChhhhhcCCCCceeecccc---cCCc
Q 006607 534 ------DLTGKEQARAPKGTIFIPYTQ---IPPR 558 (639)
Q Consensus 534 ------~~~~~~q~~a~~G~~f~~~~~---~~~~ 558 (639)
-++.++..++++|+.+|..+| |+.+
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~aRG~vVDe~ 215 (378)
T PRK15438 182 PYKTLHLADEKLIRSLKPGAILINACRGAVVDNT 215 (378)
T ss_pred ccccccccCHHHHhcCCCCcEEEECCCchhcCHH
Confidence 356788899999999999999 5554
No 439
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=79.81 E-value=3.7 Score=43.90 Aligned_cols=63 Identities=21% Similarity=0.274 Sum_probs=41.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCCcccccceeeeccccc-cceeEEEE
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVEAQHNLVLSTSYAA-HKTKIWLV 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~----l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv 531 (639)
+|.++|+ | .||.++|..|+++|+ ++.+ +++++.+. +....+.... ..+..+++++ ++++++|+
T Consensus 2 kI~IIGa-G--~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~-~~i~~~d~~~l~~aDiVii 73 (308)
T cd05292 2 KVAIVGA-G--FVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKP-VRIYAGDYADCKGADVVVI 73 (308)
T ss_pred EEEEECC-C--HHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCC-eEEeeCCHHHhCCCCEEEE
Confidence 5899999 6 999999999999994 6777 66766654 4333222211 2233345666 88888664
No 440
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=79.68 E-value=1.9 Score=42.89 Aligned_cols=129 Identities=16% Similarity=0.191 Sum_probs=74.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-CCc-cc-----------ccceeeeccccc--ccee
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPV-EA-----------QHNLVLSTSYAA--HKTK 527 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~-~~~-~~-----------~~~l~~~~~~~~--~~~~ 527 (639)
+|.|.|.. .||...|..|++.|.+|+- .++++.++|++. .+- |. ..+|...+++++ .+++
T Consensus 2 ~I~ViGlG---yvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~ad 78 (185)
T PF03721_consen 2 KIAVIGLG---YVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDAD 78 (185)
T ss_dssp EEEEE--S---TTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-S
T ss_pred EEEEECCC---cchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccc
Confidence 68888877 9999999999999999999 899999999877 321 11 133333444553 5665
Q ss_pred EE--EEcCcCChhh--------------hhcCCCCceeecccccCCc--C------------CCCCceeecCCccccCCC
Q 006607 528 IW--LVGDDLTGKE--------------QARAPKGTIFIPYTQIPPR--K------------LRKDCFYHSTPAMIIPPS 577 (639)
Q Consensus 528 vw--ivg~~~~~~~--------------q~~a~~G~~f~~~~~~~~~--~------------~R~dc~y~~~~a~~~P~~ 577 (639)
++ .|+...++.. ...+.+|.+++-=|.+||- + .+.|-.+...|-...|++
T Consensus 79 v~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~~~~~f~la~~PErl~~G~ 158 (185)
T PF03721_consen 79 VVFICVPTPSDEDGSPDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSGKKEDFHLAYSPERLREGR 158 (185)
T ss_dssp EEEE----EBETTTSBETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCCTTTCEEEEE------TTS
T ss_pred eEEEecCCCccccCCccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhcccccCCeEEECCCccCCCC
Confidence 53 3665554421 1234678888887878876 2 114666666676667776
Q ss_pred CccccccccccCcchhhhHHHHH
Q 006607 578 LSNMHSCENWLGRRVMSAWRIAG 600 (639)
Q Consensus 578 ~~~~~~~e~~~pr~~~~Ac~a~~ 600 (639)
.- =++.-|+|++..|--++
T Consensus 159 a~----~d~~~~~rvV~G~~~~~ 177 (185)
T PF03721_consen 159 AI----EDFRNPPRVVGGCDDES 177 (185)
T ss_dssp HH----HHHHSSSEEEEEESSHH
T ss_pred cc----hhccCCCEEEEeCCcHH
Confidence 42 34557777777654433
No 441
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=79.62 E-value=6.3 Score=40.05 Aligned_cols=42 Identities=17% Similarity=0.189 Sum_probs=35.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
....|++.|++| .+|.++++.+...|.+|.. ++.++.+.+++
T Consensus 139 ~~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 182 (323)
T cd08241 139 PGETVLVLGAAG--GVGLAAVQLAKALGARVIAAASSEEKLALARA 182 (323)
T ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHH
Confidence 356899999987 9999999999999999887 67777777754
No 442
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=79.47 E-value=3.2 Score=42.41 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=36.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (639)
.+-+.++|+.. -||+|||..|+++|.+|.+ ++.+.-++-...++.
T Consensus 14 sk~~~vtGg~s--GIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g 60 (256)
T KOG1200|consen 14 SKVAAVTGGSS--GIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG 60 (256)
T ss_pred cceeEEecCCc--hHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC
Confidence 45677888885 9999999999999999999 666677777666665
No 443
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=79.46 E-value=6.5 Score=45.29 Aligned_cols=90 Identities=16% Similarity=0.178 Sum_probs=62.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccc-cc-----------eeeec-cc-----
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-HN-----------LVLST-SY----- 521 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~-~~-----------l~~~~-~~----- 521 (639)
..++|+|.|+- -+|...+..+...|-+|.. ++.+|++..++ ++.+.. .+ ....+ .+
T Consensus 164 pg~kVlViGaG---~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 164 PPAKVLVIGAG---VAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCCEEEEECCc---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 37799999998 8999999999999998887 78888886655 443310 01 00011 11
Q ss_pred ---cc--cceeEEEEcCc---------CChhhhhcCCCCceeecccccC
Q 006607 522 ---AA--HKTKIWLVGDD---------LTGKEQARAPKGTIFIPYTQIP 556 (639)
Q Consensus 522 ---~~--~~~~vwivg~~---------~~~~~q~~a~~G~~f~~~~~~~ 556 (639)
.+ +.+|++|-... ++++..+.++||.++++++ ++
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg-~~ 287 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLA-AE 287 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEc-cC
Confidence 11 35788883333 3788999999999999999 65
No 444
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=79.24 E-value=1.7 Score=47.03 Aligned_cols=25 Identities=8% Similarity=0.199 Sum_probs=22.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGI 490 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~ 490 (639)
.+|.++||+| .||+++|..|+.+|+
T Consensus 3 ~KV~IiGa~G--~VG~~~a~~l~~~~~ 27 (322)
T cd01338 3 VRVAVTGAAG--QIGYSLLFRIASGEM 27 (322)
T ss_pred eEEEEECCCc--HHHHHHHHHHHhccc
Confidence 4799999998 999999999997777
No 445
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=79.17 E-value=3.6 Score=42.86 Aligned_cols=75 Identities=19% Similarity=0.201 Sum_probs=47.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCCccccccee-eecc---cc----c-----c
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIPVEAQHNLV-LSTS---YA----A-----H 524 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~---~~~~l~~~~~~~~~~~l~-~~~~---~~----~-----~ 524 (639)
-+.|+++|+.| -||++.+..|.++|++++. .+.| ...+||+..|..+--..- .++. ++ + -
T Consensus 5 GKna~vtggag--GIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 5 GKNALVTGGAG--GIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred CceEEEecCCc--hhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 46788999987 8999999999999999998 4444 444555444443311100 2221 22 1 4
Q ss_pred ceeEEEEcCcCChhh
Q 006607 525 KTKIWLVGDDLTGKE 539 (639)
Q Consensus 525 ~~~vwivg~~~~~~~ 539 (639)
+.||.|=|++|..+.
T Consensus 83 ~iDIlINgAGi~~dk 97 (261)
T KOG4169|consen 83 TIDILINGAGILDDK 97 (261)
T ss_pred ceEEEEcccccccch
Confidence 568888777766543
No 446
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=79.08 E-value=3.1 Score=42.48 Aligned_cols=30 Identities=27% Similarity=0.283 Sum_probs=26.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..++|++.|- | .||+.+|+.|.++|.+++.
T Consensus 22 ~g~~vaIqGf-G--nVG~~~a~~L~~~G~~vV~ 51 (217)
T cd05211 22 EGLTVAVQGL-G--NVGWGLAKKLAEEGGKVLA 51 (217)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCEEEE
Confidence 4679999996 5 9999999999999887666
No 447
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=79.03 E-value=3.2 Score=44.20 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=28.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
..+.++++|+...+-||+|+|+.|+++|-+|.+
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv 39 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILV 39 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEE
Confidence 456789999951148999999999999999999
No 448
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=79.02 E-value=3.7 Score=42.31 Aligned_cols=40 Identities=15% Similarity=0.178 Sum_probs=33.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccC---cEEEe--cchhhHHHHHhhC
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMG---IKVAT--ICKDDYEKLKLRI 507 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~---~~v~~--~~~~~~~~l~~~~ 507 (639)
+|.++|. | .+|.++|+.|.+.| .+|.+ |++++.++++++.
T Consensus 4 ~I~iIG~-G--~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~ 48 (267)
T PRK11880 4 KIGFIGG-G--NMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY 48 (267)
T ss_pred EEEEEec-h--HHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc
Confidence 5889997 5 99999999999888 56666 8888888887753
No 449
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=79.01 E-value=2.3 Score=46.02 Aligned_cols=25 Identities=24% Similarity=0.292 Sum_probs=22.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcE
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIK 491 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~ 491 (639)
.+|.|+|| | .||+++|..|..++..
T Consensus 1 ~KVaviGa-G--~VG~s~a~~l~~~~~~ 25 (313)
T COG0039 1 MKVAVIGA-G--NVGSSLAFLLLLQGLG 25 (313)
T ss_pred CeEEEECC-C--hHHHHHHHHHhccccc
Confidence 37999999 8 9999999999988776
No 450
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=78.82 E-value=6.2 Score=41.78 Aligned_cols=102 Identities=14% Similarity=0.038 Sum_probs=64.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--c---ceeEEE--EcCc-
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--H---KTKIWL--VGDD- 534 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~---~~~vwi--vg~~- 534 (639)
+|.++|.- .+|+++|+.|.+.|.+|.+ |++++.+++++. +... ..+.++ + ++++++ +-+.
T Consensus 2 ~Ig~IGlG---~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~------~~~~~e~~~~~~~~dvvi~~v~~~~ 71 (301)
T PRK09599 2 QLGMIGLG---RMGGNMARRLLRGGHEVVGYDRNPEAVEALAEE-GATG------ADSLEELVAKLPAPRVVWLMVPAGE 71 (301)
T ss_pred EEEEEccc---HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCee------cCCHHHHHhhcCCCCEEEEEecCCc
Confidence 57888855 9999999999999999998 888888887553 1111 112322 1 244433 3221
Q ss_pred -CC---hhhhhcCCCCceeecccccCCc-------CCC-CCceeecCCccccCC
Q 006607 535 -LT---GKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP 576 (639)
Q Consensus 535 -~~---~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~ 576 (639)
.. ++-...+++|.++++.+..+|. .++ +.+.|.+-|.+--|.
T Consensus 72 ~~~~v~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~dapvsG~~~ 125 (301)
T PRK09599 72 ITDATIDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVDVGTSGGVW 125 (301)
T ss_pred HHHHHHHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEeCCCCcCHH
Confidence 11 1112346789999999887775 122 567788877765443
No 451
>PLN02256 arogenate dehydrogenase
Probab=78.79 E-value=5.2 Score=42.86 Aligned_cols=58 Identities=17% Similarity=0.339 Sum_probs=39.6
Q ss_pred ecCCCCcceeeecCChhHH--HHHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 434 ERQPNKLKIKVVDGSSLAA--AVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 434 ~k~p~~L~irvv~Gnslta--a~v~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.|.|..|++|-+|...--- .-.-+++.+ ...+|.++| .| .+|.++|+.|.+.|.+|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIG-~G--~mG~slA~~L~~~G~~V~~ 64 (304)
T PLN02256 4 SRRPRSLRVRAIDAAQPFDYESRLQEELEKSRKLKIGIVG-FG--NFGQFLAKTFVKQGHTVLA 64 (304)
T ss_pred CCCCCCcccccccccCCCChHhHHhHhhccCCCCEEEEEe-eC--HHHHHHHHHHHhCCCEEEE
Confidence 3556568888777532111 112344444 355899999 57 9999999999999988887
No 452
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=78.71 E-value=2 Score=44.35 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=26.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+|+++|++| .||+++++.|.++|.+|.+
T Consensus 1 kvlV~GatG--~iG~~l~~~l~~~g~~V~~ 28 (328)
T TIGR01179 1 KILVTGGAG--YIGSHTVRQLLESGHEVVV 28 (328)
T ss_pred CEEEeCCCC--HHHHHHHHHHHhCCCeEEE
Confidence 489999999 9999999999999999987
No 453
>PLN02206 UDP-glucuronate decarboxylase
Probab=78.58 E-value=2.3 Score=47.80 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=28.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.++|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 119 ~~kILVTGatG--fIGs~Lv~~Ll~~G~~V~~ 148 (442)
T PLN02206 119 GLRVVVTGGAG--FVGSHLVDRLMARGDSVIV 148 (442)
T ss_pred CCEEEEECccc--HHHHHHHHHHHHCcCEEEE
Confidence 46899999999 9999999999999999987
No 454
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=78.51 E-value=2.8 Score=50.21 Aligned_cols=40 Identities=10% Similarity=0.149 Sum_probs=33.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (639)
.-++|.|+||- -+|+.||..+++.|++|++ ++++.+++..
T Consensus 334 ~i~~v~ViGaG---~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~~ 375 (737)
T TIGR02441 334 PVKTLAVLGAG---LMGAGIAQVSVDKGLKTVLKDATPAGLDRGQ 375 (737)
T ss_pred cccEEEEECCC---HhHHHHHHHHHhCCCcEEEecCCHHHHHHHH
Confidence 45789999995 9999999999999999999 7777666533
No 455
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=78.47 E-value=3.4 Score=49.37 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=32.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
+-++|.|+||. -+|+.||..+++.|.+|++ .+.+.+++
T Consensus 312 ~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~ 351 (715)
T PRK11730 312 PVKQAAVLGAG---IMGGGIAYQSASKGVPVIMKDINQKALDL 351 (715)
T ss_pred ccceEEEECCc---hhHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 45689999998 8999999999999999999 67666554
No 456
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=78.26 E-value=8.5 Score=39.96 Aligned_cols=89 Identities=16% Similarity=0.161 Sum_probs=54.7
Q ss_pred CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec----cccc---cceeEE
Q 006607 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST----SYAA---HKTKIW 529 (639)
Q Consensus 459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~----~~~~---~~~~vw 529 (639)
++++...|++.|++| -+|.++++.+..+|.++.. +++++.+.++ +.+... .+... ..++ ...+++
T Consensus 142 ~~~~~~~vlI~g~~g--~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~~~~~~~~~~d~v 215 (323)
T TIGR02823 142 LTPEDGPVLVTGATG--GVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASE---VIDREDLSPPGKPLEKERWAGA 215 (323)
T ss_pred CCCCCceEEEEcCCc--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcE---EEccccHHHHHHHhcCCCceEE
Confidence 333434899999998 9999999999999999876 6666666664 333211 11111 1111 224555
Q ss_pred E--EcCcCChhhhhcCCCCceeeccc
Q 006607 530 L--VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 530 i--vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+ +|.....+-....++|-+|+.+.
T Consensus 216 ld~~g~~~~~~~~~~l~~~G~~v~~g 241 (323)
T TIGR02823 216 VDTVGGHTLANVLAQLKYGGAVAACG 241 (323)
T ss_pred EECccHHHHHHHHHHhCCCCEEEEEc
Confidence 5 33323334455677888888886
No 457
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=78.08 E-value=2.8 Score=46.86 Aligned_cols=62 Identities=27% Similarity=0.289 Sum_probs=45.7
Q ss_pred eeeecCChhHHHHHH-hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 442 IKVVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 442 irvv~Gnsltaa~v~-~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
++.++|.+--+++=. +.-..+...|+|+|||| ++|+=+.+.|-++|..|.. |++++-+++-.
T Consensus 57 ~~~~~~~~~e~~v~~~~~~~~~~~~VlVvGatG--~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 57 ISPVTGTTSEAEVSPPNNNSKKPTTVLVVGATG--KVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCccccccceeeeccCCCCCCCCCeEEEecCCC--chhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 455555554443321 22233677999999999 9999999999999988887 88888777655
No 458
>cd03514 CrtR_beta-carotene-hydroxylase Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae. Carotenoids are important natural pigments; zeaxanthin and lutein are the only dietary carotenoids that accumulate in the macular region of the retina and lens. It is proposed that these carotenoids protect ocular tissues against photooxidative damage. CrtR does not show overall amino acid sequence similarity to the beta-carotene hydroxylases similar to CrtZ, an astaxanthin biosynthetic beta-carotene hydroxylase. However, CrtR does show sequence similarity to the green alga, Haematococcus pluvialis, beta-carotene ketolase (CrtW), which converts beta-carotene to canthaxanthin. Sequences of the CrtR_beta-carotene-hydroxylase domain family, as well as, the CrtW_beta-carotene-ketolase domain family appear to be structurally related
Probab=78.03 E-value=19 Score=36.31 Aligned_cols=46 Identities=24% Similarity=0.311 Sum_probs=24.9
Q ss_pred HHHhhccCCceecccc-c-hhccC-CcccccCChhhHHHhhcCCCCCcC
Q 006607 216 FMNNMGHCNFEFIPMW-L-FTVFP-PLKFLMYTPSYHSLHHTQFRTNYS 261 (639)
Q Consensus 216 ~~~~~~HsGye~~P~~-~-~~~lp-~L~~li~tp~~H~lHH~~~~~NYG 261 (639)
+.....|.+.+--+.+ . +...+ ++.++..+-.+|..||..++..+-
T Consensus 141 ~~~~~~H~~~~~~~~~~~~~~~~~~l~~~l~~~~nyH~~HHL~P~IP~y 189 (207)
T cd03514 141 FFDWLPHHPFEETQRWDNSRVYPSKLLNPLIMGQNYHLVHHLWPSIPWY 189 (207)
T ss_pred HheeeCccCCCCccchhhhhcccchhHheeecCCchhHHHhCCCCCchh
Confidence 4556678765421111 0 11112 335555566799999999765443
No 459
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=77.85 E-value=4.1 Score=44.33 Aligned_cols=29 Identities=17% Similarity=0.135 Sum_probs=24.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhc-cCcEEEe
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQ-MGIKVAT 494 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~-~~~~v~~ 494 (639)
.+|.++|||| .+|+.+.+.|.+ ...++..
T Consensus 4 ~~V~I~GatG--~iG~~l~~~L~~~p~~el~~ 33 (349)
T PRK08664 4 LKVGILGATG--MVGQRFVQLLANHPWFEVTA 33 (349)
T ss_pred cEEEEECCCC--HHHHHHHHHHHcCCCceEEE
Confidence 5799999999 999999999994 4446555
No 460
>PRK07201 short chain dehydrogenase; Provisional
Probab=77.85 E-value=4.5 Score=46.92 Aligned_cols=28 Identities=14% Similarity=0.178 Sum_probs=25.8
Q ss_pred EEEEecccCchhhHHHHHHHHh--ccCcEEEe
Q 006607 465 HVLLRGTVTANKVANAVASSLC--QMGIKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~--~~~~~v~~ 494 (639)
+|+|+|+|| -||+.+++.|. ++|.+|..
T Consensus 2 ~ILVTGatG--fIG~~lv~~Ll~~~~g~~V~~ 31 (657)
T PRK07201 2 RYFVTGGTG--FIGRRLVSRLLDRRREATVHV 31 (657)
T ss_pred eEEEeCCcc--HHHHHHHHHHHhcCCCCEEEE
Confidence 599999999 99999999998 68888887
No 461
>PLN02306 hydroxypyruvate reductase
Probab=77.82 E-value=4.9 Score=44.62 Aligned_cols=105 Identities=11% Similarity=0.089 Sum_probs=65.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecch---hhHHHHHhhCCc----ccc--cceeeeccccc--cceeEE
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICK---DDYEKLKLRIPV----EAQ--HNLVLSTSYAA--HKTKIW 529 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~~~~---~~~~~l~~~~~~----~~~--~~l~~~~~~~~--~~~~vw 529 (639)
..++|-++|.- .||+++|+.|+ --|.+|+..++ ++.+......+. ... .......++++ +.++++
T Consensus 164 ~gktvGIiG~G---~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV 240 (386)
T PLN02306 164 KGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVI 240 (386)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEE
Confidence 45788999976 99999999997 78999988222 112111111110 000 00011235665 677776
Q ss_pred EE--------cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006607 530 LV--------GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 530 iv--------g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
++ -..|+.++..+|++|+.||-++| |+.+ +++ -|++..+-
T Consensus 241 ~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~lVDe~AL~~AL~sg~i~gAaLDVf~~EP 303 (386)
T PLN02306 241 SLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPVIDEVALVEHLKANPMFRVGLDVFEDEP 303 (386)
T ss_pred EEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccccCHHHHHHHHHhCCeeEEEEeCCCCCC
Confidence 63 23577888999999999999999 5544 233 57776663
No 462
>PRK08223 hypothetical protein; Validated
Probab=77.80 E-value=3.3 Score=44.31 Aligned_cols=42 Identities=19% Similarity=0.218 Sum_probs=31.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchh--hHHHHHhh
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKD--DYEKLKLR 506 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~--~~~~l~~~ 506 (639)
..++|+++|+-| +|+.+|.+|++-|+.-+. -+.| +..+|.++
T Consensus 26 ~~s~VlIvG~GG---LGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ 70 (287)
T PRK08223 26 RNSRVAIAGLGG---VGGIHLLTLARLGIGKFTIADFDVFELRNFNRQ 70 (287)
T ss_pred hcCCEEEECCCH---HHHHHHHHHHHhCCCeEEEEeCCCcchhccccc
Confidence 578999999995 999999999999997655 3333 44455544
No 463
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=77.78 E-value=2.9 Score=44.46 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=29.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHH
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYE 501 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~ 501 (639)
++|+|+|+|| =||+.+|+.|.++ |.+|.. |++++..
T Consensus 2 ~~ilVtGatG--fiGs~l~~~L~~~~~~~V~~~~r~~~~~~ 40 (347)
T PRK11908 2 KKVLILGVNG--FIGHHLSKRILETTDWEVYGMDMQTDRLG 40 (347)
T ss_pred cEEEEECCCc--HHHHHHHHHHHhCCCCeEEEEeCcHHHHH
Confidence 4699999999 9999999999865 688886 5554443
No 464
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=77.70 E-value=2 Score=46.65 Aligned_cols=128 Identities=13% Similarity=0.181 Sum_probs=68.4
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcE---EEe--cchhhHHHHHhhCCcccccceeeecccc--c-cceeEEE--EcCc
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIK---VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL--VGDD 534 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~---v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~-~~~~vwi--vg~~ 534 (639)
+|+++|||| .+|+.+.+.|.+++.. +.. ++++.=+.+. .. + ..++ +.+++ + +++++++ .|..
T Consensus 1 ~VaIvGAtG--~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~--~~-~--~~~~-~~~~~~~~~~~~D~v~~a~g~~ 72 (339)
T TIGR01296 1 NVAIVGATG--AVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT--FK-G--KELE-VNEAKIESFEGIDIALFSAGGS 72 (339)
T ss_pred CEEEEcCCC--HHHHHHHHHHHhCCCChhhEEEEeccccCCCeee--eC-C--eeEE-EEeCChHHhcCCCEEEECCCHH
Confidence 489999999 9999999999986554 222 3222222221 11 1 1211 22222 2 5666655 6666
Q ss_pred CChhhhhcC-CCCceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhhh--HHHHHHHHHhcCCCC
Q 006607 535 LTGKEQARA-PKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSA--WRIAGIIHALEGWDL 610 (639)
Q Consensus 535 ~~~~~q~~a-~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~A--c~a~~~v~alEgw~~ 610 (639)
.+.+--.++ .+|+.+||.|--. .+++|+- +.+|+-- -+.-.....++.++. |.+-+++++|--...
T Consensus 73 ~s~~~a~~~~~~G~~VID~ss~~--R~~~~~p------~~vpevN--~~~i~~~~~~~iianp~C~~t~~~l~l~pL~~ 141 (339)
T TIGR01296 73 VSKEFAPKAAKCGAIVIDNTSAF--RMDPDVP------LVVPEVN--LEDLKEFNTKGIIANPNCSTIQMVVVLKPLHD 141 (339)
T ss_pred HHHHHHHHHHHCCCEEEECCHHH--hCCCCCC------EEeCCcC--HHHHhhCccCCEEECCCcHHHHHHHHHHHHHH
Confidence 666655544 6799888877311 2333432 4455521 110111111223333 999999887755443
No 465
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=77.69 E-value=7.6 Score=42.43 Aligned_cols=162 Identities=15% Similarity=0.318 Sum_probs=94.7
Q ss_pred HHHcCCcEEE-ecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh----------hHHHH
Q 006607 406 ADAKGVKVIS-LGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS----------LAAAV 454 (639)
Q Consensus 406 A~~~G~kv~~-LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns----------ltaa~ 454 (639)
+.++|.+++. ++. +.++|. |++..-+.+.|+|+ ..+|+|+.|-| +=..+
T Consensus 66 ~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y~D~IviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQaLaDl~T 145 (338)
T PRK08192 66 FNLLGGHVRETTGMASSSLSKGESLYDTARVLSTYSDVIAMRHPDAGSVKEFAEGSRVPVINGGDGSNEHPTQALLDLFT 145 (338)
T ss_pred HHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHcCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHHHHHHHHH
Confidence 5679999997 452 445554 45666778889887 34588887533 13567
Q ss_pred HHhcC-----cCCCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHH---HHHhhCCcccccceeeec-ccc-c
Q 006607 455 VVNSL-----PKTTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A 523 (639)
Q Consensus 455 v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~-~ 523 (639)
+.+.. ..+..+|+++|...-+.+++..+..|| ..|..+.+-.++.|+ .+.+++. +.+.. +.++ +.+ +
T Consensus 146 i~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~ea 223 (338)
T PRK08192 146 IQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSPKELAMPDYVISDIE-NAGHK-ITITDQLEGN 223 (338)
T ss_pred HHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECCccccCCHHHHHHHH-HcCCe-EEEEcCHHHH
Confidence 77754 124579999998721278888888888 559999884444443 2211111 12223 3343 565 4
Q ss_pred -cceeEEEEcCcCChhhhhcCCCCceeec-ccccCCc---C-CCCCcee-ecCCc
Q 006607 524 -HKTKIWLVGDDLTGKEQARAPKGTIFIP-YTQIPPR---K-LRKDCFY-HSTPA 571 (639)
Q Consensus 524 -~~~~vwivg~~~~~~~q~~a~~G~~f~~-~~~~~~~---~-~R~dc~y-~~~~a 571 (639)
++++|+... .+..|+..+...-..|.+ | |+..+ + .++|+.+ |.+|+
T Consensus 224 ~~~aDvvyt~-~~q~e~~~~~~~~~~~~~~y-~v~~e~l~~~a~~~ai~mHcLP~ 276 (338)
T PRK08192 224 LDKADILYLT-RIQEERFPSQEEANKYRGKF-RLNQSIYTQHCKSNTVIMHPLPR 276 (338)
T ss_pred HccCCEEEEc-CcccccccchHHHHHhhhcc-ccCHHHHHhhhCCCCEEECCCCC
Confidence 888888873 343332111111111212 3 46666 2 4678775 88887
No 466
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=77.64 E-value=3.1 Score=45.04 Aligned_cols=62 Identities=18% Similarity=0.159 Sum_probs=50.3
Q ss_pred HHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccc
Q 006607 451 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN 514 (639)
Q Consensus 451 taa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~ 514 (639)
-.....-..|+-...|+++|... -+|.++|.-+.++|-+|++ |++++++++++++.-.++..
T Consensus 21 ~~~~~~~~~~k~~~hi~itggS~--glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~ 84 (331)
T KOG1210|consen 21 LDHRSFIVKPKPRRHILITGGSS--GLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVE 84 (331)
T ss_pred HHHHhhhcccCccceEEEecCcc--hhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccc
Confidence 33344445566678999999985 8999999999999999999 99999999999977766433
No 467
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=77.63 E-value=2.7 Score=47.17 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=28.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
...+|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 119 ~~mkILVTGatG--FIGs~Lv~~Ll~~G~~V~~ 149 (436)
T PLN02166 119 KRLRIVVTGGAG--FVGSHLVDKLIGRGDEVIV 149 (436)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 456899999999 9999999999999999987
No 468
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=77.46 E-value=19 Score=38.75 Aligned_cols=156 Identities=15% Similarity=0.234 Sum_probs=98.6
Q ss_pred HHHHHHHHHHcCCcEEEecc----cccccc-------cccC-CceeeecCCC---------CcceeeecCCh--h-----
Q 006607 399 IEEAILEADAKGVKVISLGL----LNQGEE-------LNRN-GEIYLERQPN---------KLKIKVVDGSS--L----- 450 (639)
Q Consensus 399 I~~Ai~~A~~~G~kv~~LG~----ln~~e~-------ln~~-g~~~~~k~p~---------~L~irvv~Gns--l----- 450 (639)
.|.|+ .++|.+++.|+. +.++|. |.+. .-+.+.|+|+ ..+|+|+.+-+ .
T Consensus 63 Fe~A~---~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ 139 (305)
T PRK00856 63 FELAA---KRLGADVINFSASTSSVSKGETLADTIRTLSAMGADAIVIRHPQSGAARLLAESSDVPVINAGDGSHQHPTQ 139 (305)
T ss_pred HHHHH---HHcCCcEEEeCCCcccCCCCcCHHHHHHHHHhcCCCEEEEeCCChHHHHHHHHHCCCCEEECCCCCCCCcHH
Confidence 45554 478999999975 444444 3455 6677888877 35688887732 1
Q ss_pred ---HHHHHHhcCcC-CCcEEEEeccc--CchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeec-ccc-
Q 006607 451 ---AAAVVVNSLPK-TTAHVLLRGTV--TANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLST-SYA- 522 (639)
Q Consensus 451 ---taa~v~~~i~~-~~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~- 522 (639)
=..++.+.... +..+|+++|.. | -+++..+.++++-|.++.+-.++.|+. +++.. ..++ +.+
T Consensus 140 ~LaDl~Ti~e~~G~l~g~kv~~vGD~~~~--~v~~Sl~~~~~~~g~~~~~~~P~~~~~--~~~~~------~~~~~d~~e 209 (305)
T PRK00856 140 ALLDLLTIREEFGRLEGLKVAIVGDIKHS--RVARSNIQALTRLGAEVRLIAPPTLLP--EGMPE------YGVHTDLDE 209 (305)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCCCC--cHHHHHHHHHHHcCCEEEEECCcccCc--ccccc------eEEECCHHH
Confidence 24566665432 45799999986 5 899999999999999999966666531 01111 1233 454
Q ss_pred c-cceeEEEEcCcCCh-------hhhhcCCCCceeecccccCCc---CCCCCcee-ecCCccc
Q 006607 523 A-HKTKIWLVGDDLTG-------KEQARAPKGTIFIPYTQIPPR---KLRKDCFY-HSTPAMI 573 (639)
Q Consensus 523 ~-~~~~vwivg~~~~~-------~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y-~~~~a~~ 573 (639)
+ ++++|+....+-++ ++.++.. =+| |++.+ ..|+||.+ |.+|+.+
T Consensus 210 a~~~aDvvyt~~~q~e~~~~~~~~~~~~~~-----~~y-~v~~~ll~~a~~~~~~mHcLPa~R 266 (305)
T PRK00856 210 VIEDADVVMMLRVQKERMDGGLLPSYEEYK-----RSY-GLTAERLALAKPDAIVMHPGPVNR 266 (305)
T ss_pred HhCCCCEEEECCcccccccccchHHHHHHh-----ccC-ccCHHHHhhcCCCCEEECCCCCCC
Confidence 4 88888777443211 1122222 233 48877 56688875 8888643
No 469
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=77.34 E-value=5.4 Score=44.23 Aligned_cols=29 Identities=31% Similarity=0.286 Sum_probs=26.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.+.|+++|+. ++|.++|+.|.++|.+|++
T Consensus 5 ~k~v~iiG~g---~~G~~~A~~l~~~G~~V~~ 33 (450)
T PRK14106 5 GKKVLVVGAG---VSGLALAKFLKKLGAKVIL 33 (450)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEE
Confidence 4789999977 7999999999999999999
No 470
>PLN02572 UDP-sulfoquinovose synthase
Probab=77.34 E-value=2.4 Score=47.55 Aligned_cols=30 Identities=27% Similarity=0.234 Sum_probs=28.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
.++|+|+||+| =||+.+|+.|.++|.+|.+
T Consensus 47 ~k~VLVTGatG--fIGs~Lv~~L~~~G~~V~~ 76 (442)
T PLN02572 47 KKKVMVIGGDG--YCGWATALHLSKRGYEVAI 76 (442)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCeEEE
Confidence 56799999999 9999999999999999987
No 471
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=77.31 E-value=4.5 Score=44.05 Aligned_cols=74 Identities=11% Similarity=0.104 Sum_probs=45.7
Q ss_pred HHHHHHHHhccCcEEEe--cchhhHH-----HHHhhCCcccccceeeeccccc--cceeEEE--EcCcCC-----hhhhh
Q 006607 478 ANAVASSLCQMGIKVAT--ICKDDYE-----KLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDDLT-----GKEQA 541 (639)
Q Consensus 478 g~ava~~L~~~~~~v~~--~~~~~~~-----~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~~~-----~~~q~ 541 (639)
|+++|+-|++.|.+|.+ |++++.+ .+.+. +.. ..++.++ ++++++| +.+.-. ..-..
T Consensus 32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~Laea-GA~------~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa 104 (341)
T TIGR01724 32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDA-GVK------VVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIE 104 (341)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHC-CCe------ecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHh
Confidence 89999999999999999 5665443 23332 111 1223432 5666644 221111 11123
Q ss_pred cCCCCceeecccccCCc
Q 006607 542 RAPKGTIFIPYTQIPPR 558 (639)
Q Consensus 542 ~a~~G~~f~~~~~~~~~ 558 (639)
.+++|+++|+.|-++|.
T Consensus 105 ~L~~GaIVID~STIsP~ 121 (341)
T TIGR01724 105 HVPENAVICNTCTVSPV 121 (341)
T ss_pred cCCCCCEEEECCCCCHH
Confidence 46999999999998876
No 472
>PLN02602 lactate dehydrogenase
Probab=77.25 E-value=2.2 Score=46.75 Aligned_cols=64 Identities=22% Similarity=0.348 Sum_probs=41.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCccc----ccceeee-ccccc-cceeEEEE
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA----QHNLVLS-TSYAA-HKTKIWLV 531 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~----~~~l~~~-~~~~~-~~~~vwiv 531 (639)
.+|.++|| | .||+++|..|+.+++ .+.| .++++.+-...++.... ... +.. ++|++ ++++|+|+
T Consensus 38 ~KI~IIGa-G--~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~~dy~~~~daDiVVi 111 (350)
T PLN02602 38 TKVSVVGV-G--NVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILASTDYAVTAGSDLCIV 111 (350)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeCCCHHHhCCCCEEEE
Confidence 69999997 7 999999999997776 3444 55665554444322211 112 222 24666 88988775
No 473
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=77.19 E-value=9.9 Score=38.81 Aligned_cols=86 Identities=14% Similarity=0.185 Sum_probs=55.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeee--cc----ccc----cceeEEE
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLS--TS----YAA----HKTKIWL 530 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~--~~----~~~----~~~~vwi 530 (639)
.+.|++.|++| .+|.++++.+..+|.++.. ++.++.+.+++ .+.. ..+.. ++ +.+ ..+++++
T Consensus 145 ~~~vli~g~~~--~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi 218 (328)
T cd08268 145 GDSVLITAASS--SVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGAA---HVIVTDEEDLVAEVLRITGGKGVDVVF 218 (328)
T ss_pred CCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCC---EEEecCCccHHHHHHHHhCCCCceEEE
Confidence 46899999987 9999999999999999888 77778777743 3221 11111 11 111 2456666
Q ss_pred --EcCcCChhhhhcCCCCceeecccc
Q 006607 531 --VGDDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 531 --vg~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
+|.....+-...++++-.|+.+++
T Consensus 219 ~~~~~~~~~~~~~~l~~~g~~v~~g~ 244 (328)
T cd08268 219 DPVGGPQFAKLADALAPGGTLVVYGA 244 (328)
T ss_pred ECCchHhHHHHHHhhccCCEEEEEEe
Confidence 344444444556777778887764
No 474
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=77.12 E-value=2.3 Score=47.30 Aligned_cols=65 Identities=14% Similarity=0.166 Sum_probs=42.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcE------EE----e-cchhhHHHHHhhCCccc---ccceeeec--cccc-cce
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIK------VA----T-ICKDDYEKLKLRIPVEA---QHNLVLST--SYAA-HKT 526 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~------v~----~-~~~~~~~~l~~~~~~~~---~~~l~~~~--~~~~-~~~ 526 (639)
-+|.++||+| .||+++|..|+.+++- ++ + +++++.+-...++.... ..+ +.++ ++++ +++
T Consensus 45 ~KV~IIGAaG--~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~-v~i~~~~y~~~kda 121 (387)
T TIGR01757 45 VNVAVSGAAG--MISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLRE-VSIGIDPYEVFEDA 121 (387)
T ss_pred eEEEEECCCc--HHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCc-eEEecCCHHHhCCC
Confidence 4789999998 9999999999977762 33 2 46676665554433322 012 3333 3666 899
Q ss_pred eEEEE
Q 006607 527 KIWLV 531 (639)
Q Consensus 527 ~vwiv 531 (639)
+|+|+
T Consensus 122 DIVVi 126 (387)
T TIGR01757 122 DWALL 126 (387)
T ss_pred CEEEE
Confidence 88775
No 475
>PRK06436 glycerate dehydrogenase; Provisional
Probab=77.09 E-value=4.5 Score=43.38 Aligned_cols=80 Identities=13% Similarity=0.070 Sum_probs=54.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--------E
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------V 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------v 531 (639)
..++|-++|-- .||+++|+.|...|.+|...++... ++ +. . ....++++ +++++++ .
T Consensus 121 ~gktvgIiG~G---~IG~~vA~~l~afG~~V~~~~r~~~----~~---~~--~-~~~~~l~ell~~aDiv~~~lp~t~~T 187 (303)
T PRK06436 121 YNKSLGILGYG---GIGRRVALLAKAFGMNIYAYTRSYV----ND---GI--S-SIYMEPEDIMKKSDFVLISLPLTDET 187 (303)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCCCc----cc---Cc--c-cccCCHHHHHhhCCEEEECCCCCchh
Confidence 46788999985 9999999988788999988222110 00 00 0 01224444 5666655 2
Q ss_pred cCcCChhhhhcCCCCceeecccc
Q 006607 532 GDDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 532 g~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
-..++.+++.++++|++||.++|
T Consensus 188 ~~li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 188 RGMINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred hcCcCHHHHhcCCCCeEEEECCC
Confidence 33567888999999999999999
No 476
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=77.05 E-value=2.6 Score=48.20 Aligned_cols=110 Identities=11% Similarity=0.029 Sum_probs=71.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-CCcccccceeeeccccc-----cceeEEE---
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAA-----HKTKIWL--- 530 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~-----~~~~vwi--- 530 (639)
...+|-++|-- ..|+++|+-|.++|.+|.+ |+.++.+.+.++ ...+. .++.-..+.++ ++++++|
T Consensus 5 ~~~~IG~IGLG---~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga-~~~~~a~s~~e~v~~l~~~dvIi~~v 80 (493)
T PLN02350 5 ALSRIGLAGLA---VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGN-LPLYGFKDPEDFVLSIQKPRSVIILV 80 (493)
T ss_pred CCCCEEEEeeH---HHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCC-cccccCCCHHHHHhcCCCCCEEEEEC
Confidence 34578888866 8999999999999999999 888999988774 11111 11111223432 2475544
Q ss_pred -----EcCcCChhhhhcCCCCceeecccccCCc-------CCC-CCceeecCCccccCC
Q 006607 531 -----VGDDLTGKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP 576 (639)
Q Consensus 531 -----vg~~~~~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~ 576 (639)
|.+.++ .-...+.+|.+++|.+-++|. +++ +.+.|.+.|+.--|.
T Consensus 81 ~~~~aV~~Vi~-gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fldapVSGG~~ 138 (493)
T PLN02350 81 KAGAPVDQTIK-ALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYLGMGVSGGEE 138 (493)
T ss_pred CCcHHHHHHHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeCCCcCCHH
Confidence 222331 113345799999999998776 122 566788888875554
No 477
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=76.86 E-value=2.9 Score=44.77 Aligned_cols=28 Identities=21% Similarity=0.270 Sum_probs=25.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcE--EEe
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIK--VAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~--v~~ 494 (639)
+|.++|||| .+|+++|..|+..|.. |.+
T Consensus 2 kI~IiGatG--~vG~~~a~~l~~~g~~~~v~l 31 (309)
T cd05294 2 KVSIIGASG--RVGSATALLLAKEDVVKEINL 31 (309)
T ss_pred EEEEECCCC--hHHHHHHHHHHhCCCCCEEEE
Confidence 689999999 9999999999998876 666
No 478
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=76.83 E-value=6.7 Score=41.29 Aligned_cols=85 Identities=11% Similarity=0.190 Sum_probs=56.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeec--c----ccc---cceeEEE-
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YAA---HKTKIWL- 530 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~~---~~~~vwi- 530 (639)
+.|++.|++| -+|.++++.+...|. +|.. +++++.+.++++++.+. .+... + +++ ...++++
T Consensus 156 ~~VlI~ga~g--~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~---vi~~~~~~~~~~i~~~~~~gvd~vid 230 (345)
T cd08293 156 QTMVVSGAAG--ACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA---AINYKTDNVAERLRELCPEGVDVYFD 230 (345)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE---EEECCCCCHHHHHHHHCCCCceEEEE
Confidence 7899999998 999999998888898 6766 78888888887655432 11111 1 111 2356666
Q ss_pred -EcCcCChhhhhcCCCCceeeccc
Q 006607 531 -VGDDLTGKEQARAPKGTIFIPYT 553 (639)
Q Consensus 531 -vg~~~~~~~q~~a~~G~~f~~~~ 553 (639)
+|.....+-...+.+|-+++.+.
T Consensus 231 ~~g~~~~~~~~~~l~~~G~iv~~G 254 (345)
T cd08293 231 NVGGEISDTVISQMNENSHIILCG 254 (345)
T ss_pred CCCcHHHHHHHHHhccCCEEEEEe
Confidence 33322344455667777777765
No 479
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=76.71 E-value=3.3 Score=43.55 Aligned_cols=39 Identities=10% Similarity=0.175 Sum_probs=33.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
++|.++|+. .+|+++|..|++.|.+|++ +++++.++.++
T Consensus 4 ~~I~ViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (291)
T PRK06035 4 KVIGVVGSG---VMGQGIAQVFARTGYDVTIVDVSEEILKNAME 44 (291)
T ss_pred cEEEEECcc---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 579999996 9999999999999999999 78888776544
No 480
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=76.70 E-value=5.5 Score=41.59 Aligned_cols=76 Identities=22% Similarity=0.257 Sum_probs=53.3
Q ss_pred HHHHhcCcCCCcEEEEecccCchh--hHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCcccccceeeecccc-c-ccee
Q 006607 453 AVVVNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTK 527 (639)
Q Consensus 453 a~v~~~i~~~~~~V~~~Gatg~~k--ig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~ 527 (639)
+..++.++ ..+.+++.|..|.-| ++.|++..||++|+.|+. .-.|-..+||.....+... ..+. . .+++
T Consensus 96 ~~~~~~~~-~~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~~~~~~~~-----~~l~~~l~~~d 169 (254)
T COG1484 96 ASLVEFFE-RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAAFDEGRLE-----EKLLRELKKVD 169 (254)
T ss_pred HHHHHHhc-cCCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHhcCchH-----HHHHHHhhcCC
Confidence 34445667 777899999876334 899999999999999999 7788888888875542210 0121 2 4668
Q ss_pred EEEEcCc
Q 006607 528 IWLVGDD 534 (639)
Q Consensus 528 vwivg~~ 534 (639)
+.|+||.
T Consensus 170 lLIiDDl 176 (254)
T COG1484 170 LLIIDDI 176 (254)
T ss_pred EEEEecc
Confidence 8887654
No 481
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=76.61 E-value=2.9 Score=43.95 Aligned_cols=92 Identities=16% Similarity=0.230 Sum_probs=60.1
Q ss_pred hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec-cccc--cceeEEE--EcC--cCCh-----hh-h
Q 006607 476 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL--VGD--DLTG-----KE-Q 540 (639)
Q Consensus 476 kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwi--vg~--~~~~-----~~-q 540 (639)
.+|.++|+.|++.|.+|.+ |++++.+++++. + +..+ +.++ ++++++| |-+ .+.. ++ .
T Consensus 6 ~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-g-------~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~ 77 (288)
T TIGR01692 6 NMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAA-G-------AQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGIL 77 (288)
T ss_pred HhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHc-C-------CeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHh
Confidence 8999999999999999998 888888888654 1 1122 3332 5565544 221 1111 11 2
Q ss_pred hcCCCCceeecccccCCcC---C----C-CCceeecCCccccC
Q 006607 541 ARAPKGTIFIPYTQIPPRK---L----R-KDCFYHSTPAMIIP 575 (639)
Q Consensus 541 ~~a~~G~~f~~~~~~~~~~---~----R-~dc~y~~~~a~~~P 575 (639)
..+++|+++++.|-++|.. + + +.+.|.+.|.+--|
T Consensus 78 ~~~~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vdaPv~Gg~ 120 (288)
T TIGR01692 78 PKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMDAPVSGGV 120 (288)
T ss_pred hcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEECCCCCCH
Confidence 2568999999999988861 1 1 45668887776433
No 482
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=76.27 E-value=2.4 Score=44.19 Aligned_cols=27 Identities=15% Similarity=0.306 Sum_probs=24.0
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
|+|+||+| =||+.+|+.|.++|.++..
T Consensus 2 ilVtGa~G--fiG~~l~~~L~~~g~~~v~ 28 (308)
T PRK11150 2 IIVTGGAG--FIGSNIVKALNDKGITDIL 28 (308)
T ss_pred EEEecCCc--HHHHHHHHHHHhCCCceEE
Confidence 79999999 9999999999999985444
No 483
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=76.23 E-value=5.1 Score=43.31 Aligned_cols=99 Identities=10% Similarity=0.142 Sum_probs=64.1
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607 461 KTTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 531 (639)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------ 531 (639)
-..++|-++|-- .||+++|+.|. --|.+|...+...-+.-..+.. +...++++ +.++++++
T Consensus 143 L~gktvGIiG~G---~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~-------~~~~~l~ell~~sDvv~lh~plt~ 212 (323)
T PRK15409 143 VHHKTLGIVGMG---RIGMALAQRAHFGFNMPILYNARRHHKEAEERFN-------ARYCDLDTLLQESDFVCIILPLTD 212 (323)
T ss_pred CCCCEEEEEccc---HHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcC-------cEecCHHHHHHhCCEEEEeCCCCh
Confidence 356789999985 99999999986 7888988722111010001111 11235554 66777553
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006607 532 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 532 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
-..++.++..+|++|+.||-++| |+.+ +++ -|++..+-
T Consensus 213 ~T~~li~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf~~EP 267 (323)
T PRK15409 213 ETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267 (323)
T ss_pred HHhhccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecCCCCC
Confidence 23567789999999999999999 5543 333 57777664
No 484
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=76.07 E-value=3 Score=41.36 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=24.4
Q ss_pred EEEEecccCchhhHHHHHHHHhcc--CcEEEe
Q 006607 465 HVLLRGTVTANKVANAVASSLCQM--GIKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~--~~~v~~ 494 (639)
+|+++|++| -||+++|+.|+++ ++++..
T Consensus 2 ~vlItGas~--gIG~~ia~~l~~~~~~~~v~~ 31 (235)
T PRK09009 2 NILIVGGSG--GIGKAMVKQLLERYPDATVHA 31 (235)
T ss_pred EEEEECCCC--hHHHHHHHHHHHhCCCCEEEE
Confidence 689999998 9999999999987 466665
No 485
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=76.05 E-value=1.6 Score=46.99 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=30.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (639)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (639)
-++|.|+||- .+|+.||..++.-|++|++ ++++..++
T Consensus 3 i~kv~ViGaG---~MG~gIA~~~A~~G~~V~l~D~~~~~~~~ 41 (307)
T COG1250 3 IKKVAVIGAG---VMGAGIAAVFALAGYDVVLKDISPEALER 41 (307)
T ss_pred ccEEEEEccc---chhHHHHHHHhhcCCceEEEeCCHHHHHH
Confidence 3689999998 9999999999997799999 66555443
No 486
>PLN02342 ornithine carbamoyltransferase
Probab=75.90 E-value=25 Score=38.71 Aligned_cols=162 Identities=15% Similarity=0.188 Sum_probs=95.4
Q ss_pred HHHcCCcEEEecccc----ccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607 406 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 456 (639)
Q Consensus 406 A~~~G~kv~~LG~ln----~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~ 456 (639)
+.++|.+++.|+.=+ ++|.+ ....-+.+.|+|+ ...+.|+.+-+ +=..++.
T Consensus 107 ~~~LGg~~i~l~~~~ss~~kGESl~DTarvLs~y~D~IviR~~~~~~~~~la~~~~vPVINA~~~~~HPtQaLaDl~Ti~ 186 (348)
T PLN02342 107 FFLLGGHALYLGPDDIQLGKREETRDIARVLSRYNDIIMARVFAHQDVLDLAEYSSVPVINGLTDYNHPCQIMADALTII 186 (348)
T ss_pred HHHcCCcEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEeCCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 578999999996533 44543 3445567778876 24577777643 1134555
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHH---HHhhCCcccc-cceeeec-ccc-c-cceeE
Q 006607 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEK---LKLRIPVEAQ-HNLVLST-SYA-A-HKTKI 528 (639)
Q Consensus 457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~---l~~~~~~~~~-~~l~~~~-~~~-~-~~~~v 528 (639)
+.... +..+|.++|... .+.+..+..|++-|.+|.+-.++.++. +.+++. +.+ .. +.++ +.+ + ++++|
T Consensus 187 e~~G~l~glkva~vGD~~--nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~~~a~-~~g~~~-~~~~~d~~eav~~aDV 262 (348)
T PLN02342 187 EHIGRLEGTKVVYVGDGN--NIVHSWLLLAAVLPFHFVCACPKGYEPDAKTVEKAR-AAGISK-IEITNDPAEAVKGADV 262 (348)
T ss_pred HHhCCcCCCEEEEECCCc--hhHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHH-HhCCCc-EEEEcCHHHHhCCCCE
Confidence 54432 457999999975 799999999999999999844443321 111111 111 12 3333 455 4 88888
Q ss_pred EEEcCcCChhhhhc-CCCCceeecccccCCc---CCCCCce-eecCCcc
Q 006607 529 WLVGDDLTGKEQAR-APKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 572 (639)
Q Consensus 529 wivg~~~~~~~q~~-a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~ 572 (639)
+..+.|.+..+.++ ...-..|-+| |++.+ ..++||. -|.+|+.
T Consensus 263 vy~~~W~s~~~~e~~~~~~~~~~~y-~vt~ell~~ak~~aivMHpLP~~ 310 (348)
T PLN02342 263 VYTDVWASMGQKEEAEKRKKAFQGF-QVNEALMKLAGPQAYFMHCLPAE 310 (348)
T ss_pred EEECCccccccchhhHHHHHhccCC-ccCHHHHhccCCCcEEeCCCCcC
Confidence 88876554321110 0011123445 38877 5568886 4788864
No 487
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=75.88 E-value=2.1 Score=45.49 Aligned_cols=63 Identities=17% Similarity=0.301 Sum_probs=41.3
Q ss_pred EEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcccc---cceeeec-cccc-cceeEEEE
Q 006607 466 VLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ---HNLVLST-SYAA-HKTKIWLV 531 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~---~~l~~~~-~~~~-~~~~vwiv 531 (639)
|.++|+ | .||+++|..|+.+|+ .+.+ .++++.+....++..-.. ...+..+ ++++ ++++++|+
T Consensus 1 i~iiGa-G--~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~~~l~~aDiVIi 72 (300)
T cd00300 1 ITIIGA-G--NVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYADAADADIVVI 72 (300)
T ss_pred CEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCHHHhCCCCEEEE
Confidence 468898 5 899999999998884 5666 667777766665333211 1112222 4666 88888775
No 488
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=75.85 E-value=5.4 Score=45.91 Aligned_cols=83 Identities=16% Similarity=0.129 Sum_probs=55.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--------
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------- 531 (639)
..++|.++|-- .||+.+|+.|...|.+|...+...-.+-..+.+.+ ..++++ +.++++++
T Consensus 139 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~-------~~~l~ell~~aDiV~l~lP~t~~t 208 (526)
T PRK13581 139 YGKTLGIIGLG---RIGSEVAKRAKAFGMKVIAYDPYISPERAAQLGVE-------LVSLDELLARADFITLHTPLTPET 208 (526)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCE-------EEcHHHHHhhCCEEEEccCCChHh
Confidence 45689999985 99999999999999999882221101101111111 114544 56666542
Q ss_pred cCcCChhhhhcCCCCceeecccc
Q 006607 532 GDDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 532 g~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
-..++.+...++++|++++.++|
T Consensus 209 ~~li~~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 209 RGLIGAEELAKMKPGVRIINCAR 231 (526)
T ss_pred hcCcCHHHHhcCCCCeEEEECCC
Confidence 24566788999999999999999
No 489
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=75.73 E-value=3.2 Score=43.09 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=42.4
Q ss_pred EEEecccCchhhHHHHHHHHhccC----cEEEe--cchhhHHHHHhhCCccccc--c-eeeec-c-ccc-cceeEEEE
Q 006607 466 VLLRGTVTANKVANAVASSLCQMG----IKVAT--ICKDDYEKLKLRIPVEAQH--N-LVLST-S-YAA-HKTKIWLV 531 (639)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~----~~v~~--~~~~~~~~l~~~~~~~~~~--~-l~~~~-~-~~~-~~~~vwiv 531 (639)
|.++||.| .+|+.+|..|+..| .++.| .++++++....++..-... + -+..+ + +++ ++++++|.
T Consensus 1 I~IIGagG--~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~ 76 (263)
T cd00650 1 IAVIGAGG--NVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVII 76 (263)
T ss_pred CEEECCCC--hHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEE
Confidence 57899987 89999999999888 67887 6666666555543221111 1 12333 3 455 88988774
No 490
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=75.67 E-value=2.8 Score=42.96 Aligned_cols=28 Identities=18% Similarity=0.348 Sum_probs=26.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (639)
+|+|+|+|| -||+++++.|.++|.+|..
T Consensus 1 kilv~G~tG--~iG~~l~~~l~~~g~~v~~ 28 (287)
T TIGR01214 1 RILITGANG--QLGRELVQQLSPEGRVVVA 28 (287)
T ss_pred CEEEEcCCC--HHHHHHHHHHHhcCCEEEE
Confidence 489999999 9999999999999999887
No 491
>PLN02477 glutamate dehydrogenase
Probab=75.57 E-value=11 Score=42.31 Aligned_cols=29 Identities=17% Similarity=0.248 Sum_probs=26.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEE
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA 493 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~ 493 (639)
+.++|++.|- | .||+.+|+.|.++|.+|+
T Consensus 205 ~g~~VaIqGf-G--nVG~~~A~~L~e~GakVV 233 (410)
T PLN02477 205 AGQTFVIQGF-G--NVGSWAAQLIHEKGGKIV 233 (410)
T ss_pred cCCEEEEECC-C--HHHHHHHHHHHHcCCEEE
Confidence 4578999995 6 999999999999999999
No 492
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=75.55 E-value=9.3 Score=37.93 Aligned_cols=89 Identities=15% Similarity=0.095 Sum_probs=54.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--c----cc---c-cceeEE
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YA---A-HKTKIW 529 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~---~-~~~~vw 529 (639)
....|++.|++| .+|.++++.+..+|.++.. ++.++.+.+++.-+ ....++... + ++ . +.++++
T Consensus 108 ~g~~vlv~g~~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 183 (293)
T cd05195 108 KGESVLIHAAAG--GVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGG--PVDHIFSSRDLSFADGILRATGGRGVDVV 183 (293)
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCC--CcceEeecCchhHHHHHHHHhCCCCceEE
Confidence 346899999998 9999999988899999887 66677776654321 111112111 1 11 1 345665
Q ss_pred E--EcCcCChhhhhcCCCCceeecccc
Q 006607 530 L--VGDDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 530 i--vg~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
+ +|....++-.+..+++..++.+.+
T Consensus 184 i~~~~~~~~~~~~~~l~~~g~~v~~g~ 210 (293)
T cd05195 184 LNSLSGELLRASWRCLAPFGRFVEIGK 210 (293)
T ss_pred EeCCCchHHHHHHHhcccCceEEEeec
Confidence 5 444333444455666666776653
No 493
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=75.37 E-value=3.6 Score=44.53 Aligned_cols=128 Identities=13% Similarity=0.203 Sum_probs=70.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEE---E-e-cchhhHHHHHhhCCcccccceeeecccc--c-cceeEEE--EcC
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGIKV---A-T-ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL--VGD 533 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v---~-~-~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~-~~~~vwi--vg~ 533 (639)
.+|+++|||| .+|+.+++.|.+++..+ . + ++++.=+.+. +. + .. +.+.+.. + +++++++ .|.
T Consensus 2 ~~V~IvGAtG--~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~~-g--~~-i~v~d~~~~~~~~vDvVf~A~g~ 73 (334)
T PRK14874 2 YNVAVVGATG--AVGREMLNILEERNFPVDKLRLLASARSAGKELS--FK-G--KE-LKVEDLTTFDFSGVDIALFSAGG 73 (334)
T ss_pred CEEEEECCCC--HHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--eC-C--ce-eEEeeCCHHHHcCCCEEEECCCh
Confidence 3799999999 99999999999876542 2 2 3332222221 11 1 12 2222222 2 5667766 677
Q ss_pred cCChhhhhcC-CCCceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhhh--HHHHHHHHHhcCCC
Q 006607 534 DLTGKEQARA-PKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSA--WRIAGIIHALEGWD 609 (639)
Q Consensus 534 ~~~~~~q~~a-~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~A--c~a~~~v~alEgw~ 609 (639)
..+.+--.++ ..|+.++|.|- +. .+++|+. +.+|+- + -+.-....-++.++. |.+-+++++|--..
T Consensus 74 g~s~~~~~~~~~~G~~VIDlS~-~~-R~~~~~p------~~lpev-n-~~~i~~~~~~~iVanp~C~~t~~~l~l~pL~ 142 (334)
T PRK14874 74 SVSKKYAPKAAAAGAVVIDNSS-AF-RMDPDVP------LVVPEV-N-PEALAEHRKKGIIANPNCSTIQMVVALKPLH 142 (334)
T ss_pred HHHHHHHHHHHhCCCEEEECCc-hh-hcCCCCC------eEcCCc-C-HHHHhhhhcCCeEECccHHHHHHHHHHHHHH
Confidence 7666644433 67998888872 21 2333433 446662 1 000001101234443 99999998775544
No 494
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=75.23 E-value=9 Score=42.53 Aligned_cols=80 Identities=15% Similarity=0.026 Sum_probs=55.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc-------
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------- 532 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg------- 532 (639)
..++|-++|.- .||+.+|+.|..-|.+|+..+..+-+ . .+. ....++++ +.++++++-
T Consensus 115 ~gktvGIIG~G---~IG~~va~~l~a~G~~V~~~Dp~~~~---~---~~~----~~~~~l~ell~~aDiV~lh~Plt~~g 181 (381)
T PRK00257 115 AERTYGVVGAG---HVGGRLVRVLRGLGWKVLVCDPPRQE---A---EGD----GDFVSLERILEECDVISLHTPLTKEG 181 (381)
T ss_pred CcCEEEEECCC---HHHHHHHHHHHHCCCEEEEECCcccc---c---ccC----ccccCHHHHHhhCCEEEEeCcCCCCc
Confidence 46789999986 99999999999999999983321110 0 010 11224444 566665522
Q ss_pred -----CcCChhhhhcCCCCceeecccc
Q 006607 533 -----DDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 533 -----~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
.-++.+...++++|+++|-.+|
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~aR 208 (381)
T PRK00257 182 EHPTRHLLDEAFLASLRPGAWLINASR 208 (381)
T ss_pred cccccccCCHHHHhcCCCCeEEEECCC
Confidence 2356678999999999999999
No 495
>PRK08605 D-lactate dehydrogenase; Validated
Probab=75.01 E-value=6.3 Score=42.66 Aligned_cols=81 Identities=17% Similarity=0.137 Sum_probs=52.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHHHHHhhCCccccccee-eeccccc--cceeEEEEc-----
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYEKLKLRIPVEAQHNLV-LSTSYAA--HKTKIWLVG----- 532 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~-~~~~~~~--~~~~vwivg----- 532 (639)
..++|.++|.- .||+++|+.|+ ..|.+|...++..-...+.. + ..+++++ ++++++++-
T Consensus 145 ~g~~VgIIG~G---~IG~~vA~~L~~~~g~~V~~~d~~~~~~~~~~---------~~~~~~l~ell~~aDvIvl~lP~t~ 212 (332)
T PRK08605 145 KDLKVAVIGTG---RIGLAVAKIFAKGYGSDVVAYDPFPNAKAATY---------VDYKDTIEEAVEGADIVTLHMPATK 212 (332)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhcCCCEEEEECCCccHhHHhh---------ccccCCHHHHHHhCCEEEEeCCCCc
Confidence 45679999975 99999999996 46888888433221111110 1 1234553 566665521
Q ss_pred ---CcCChhhhhcCCCCceeecccc
Q 006607 533 ---DDLTGKEQARAPKGTIFIPYTQ 554 (639)
Q Consensus 533 ---~~~~~~~q~~a~~G~~f~~~~~ 554 (639)
..++.+...++++|++++..++
T Consensus 213 ~t~~li~~~~l~~mk~gailIN~sR 237 (332)
T PRK08605 213 YNHYLFNADLFKHFKKGAVFVNCAR 237 (332)
T ss_pred chhhhcCHHHHhcCCCCcEEEECCC
Confidence 1334556778999999999999
No 496
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=74.86 E-value=7 Score=41.14 Aligned_cols=91 Identities=19% Similarity=0.165 Sum_probs=56.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc---c----cceeeeccccc--cceeEEEE--
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA---Q----HNLVLSTSYAA--HKTKIWLV-- 531 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~---~----~~l~~~~~~~~--~~~~vwiv-- 531 (639)
+|.++|+ | .+|+++|..|++.|.+|.+ |++++.+.++++-.... + ......++.++ ++++++|+
T Consensus 3 kI~iiG~-G--~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (325)
T PRK00094 3 KIAVLGA-G--SWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV 79 (325)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence 5889997 4 9999999999999999988 88888888887621110 0 01112224442 56777552
Q ss_pred cCcCCh---hhh-hcCCCCceeeccc-ccCCc
Q 006607 532 GDDLTG---KEQ-ARAPKGTIFIPYT-QIPPR 558 (639)
Q Consensus 532 g~~~~~---~~q-~~a~~G~~f~~~~-~~~~~ 558 (639)
-+.-.+ ++. ...++|+++++.+ -+++.
T Consensus 80 ~~~~~~~v~~~l~~~~~~~~~vi~~~ngv~~~ 111 (325)
T PRK00094 80 PSQALREVLKQLKPLLPPDAPIVWATKGIEPG 111 (325)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEEeecccCC
Confidence 111000 111 1246889999887 36653
No 497
>PRK06932 glycerate dehydrogenase; Provisional
Probab=74.51 E-value=4.4 Score=43.56 Aligned_cols=94 Identities=12% Similarity=0.081 Sum_probs=63.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--------
Q 006607 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 531 (639)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------- 531 (639)
..++|-++|-- .||+++|+.|.--|.+|+-.++..- .+... ...++++ +.++++++
T Consensus 146 ~gktvgIiG~G---~IG~~va~~l~~fg~~V~~~~~~~~----~~~~~-------~~~~l~ell~~sDiv~l~~Plt~~T 211 (314)
T PRK06932 146 RGSTLGVFGKG---CLGTEVGRLAQALGMKVLYAEHKGA----SVCRE-------GYTPFEEVLKQADIVTLHCPLTETT 211 (314)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhcCCCEEEEECCCcc----ccccc-------ccCCHHHHHHhCCEEEEcCCCChHH
Confidence 45789999985 9999999999999999987322110 00000 0124544 66677653
Q ss_pred cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006607 532 GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 569 (639)
Q Consensus 532 g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 569 (639)
-..++.++..++|+|++++-++| |+.. +++ -|++..+-
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRG~~Vde~AL~~aL~~g~i~gAaLDV~~~EP 264 (314)
T PRK06932 212 QNLINAETLALMKPTAFLINTGRGPLVDEQALLDALENGKIAGAALDVLVKEP 264 (314)
T ss_pred hcccCHHHHHhCCCCeEEEECCCccccCHHHHHHHHHcCCccEEEEecCCCCC
Confidence 24577888999999999999999 5543 344 67776663
No 498
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=74.44 E-value=13 Score=38.95 Aligned_cols=54 Identities=13% Similarity=0.009 Sum_probs=40.1
Q ss_pred hHHHHHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607 450 LAAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (639)
Q Consensus 450 ltaa~v~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (639)
.||...++.+.. ....|++.|++| .+|.+.++.+.+.|.+++. ++.++.+.+++
T Consensus 149 ~~a~~~~~~~~~~~~~~vlI~g~~g--~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~ 205 (334)
T PRK13771 149 GMVYRGLRRAGVKKGETVLVTGAGG--GVGIHAIQVAKALGAKVIAVTSSESKAKIVSK 205 (334)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCc--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 344444444522 346899999988 9999999999999999876 77788877744
No 499
>PRK06223 malate dehydrogenase; Reviewed
Probab=74.38 E-value=6.5 Score=41.55 Aligned_cols=65 Identities=17% Similarity=0.251 Sum_probs=40.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhh----CCcccccceeee-ccccc-cceeEEEE
Q 006607 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLR----IPVEAQHNLVLS-TSYAA-HKTKIWLV 531 (639)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~----~~~~~~~~l~~~-~~~~~-~~~~vwiv 531 (639)
.+|.++|+ | .+|+++|..|++.|. .|.+ +++++.+....+ .........+.. +++++ ++++++|+
T Consensus 3 ~KI~VIGa-G--~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~~~~~aDiVii 76 (307)
T PRK06223 3 KKISIIGA-G--NVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYEDIAGSDVVVI 76 (307)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHHHHCCCCEEEE
Confidence 47999999 7 999999999998876 7777 666655432222 111111111222 24665 88888663
No 500
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=74.24 E-value=4.7 Score=42.81 Aligned_cols=37 Identities=16% Similarity=0.092 Sum_probs=31.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (639)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (639)
+|.++| .| -+|+++|..|+++|.+|++ ++++..+..+
T Consensus 4 ~V~VIG-~G--~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 4 SVAIIG-AG--LIGRAWAIVFARAGHEVRLWDADPAAAAAAP 42 (308)
T ss_pred EEEEEC-cc--HHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence 689999 55 9999999999999999999 7777777654
Done!