BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006608
(639 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/641 (67%), Positives = 482/641 (75%), Gaps = 36/641 (5%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANG-DGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHR 59
MDFDEY+YLEK VENPE K KET NG D VKS ++ RSRSSK KS++ +D D R
Sbjct: 1 MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRLKR 60
Query: 60 SRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNG 119
S KS D+SR+HDRRKER SS RS SRDG ERDR R E
Sbjct: 61 S---KSGDDSRDHDRRKERGSSHPRSSSRDG----------------ERDRHRSSREHR- 100
Query: 120 RDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREV 179
R+RD D DR+ KE++REK +R R +RD
Sbjct: 101 ------------ERDRDRDRDREERNGKERDREKDRNRERDRDRDRRERDRESERERERE 148
Query: 180 IERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQV- 238
ERERSR + +R+ +RERSRDRE KERE+ERE R+ D+E+RR K+KKE+V
Sbjct: 149 RERERSRRSRSRSEKHLSERDEKDRERSRDRENKEREREREIRERDRETRRHKDKKEEVA 208
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
EPE DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY+EFY
Sbjct: 209 EPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFY 268
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
D MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS ++ AG GG GPYSGGARRLYVG
Sbjct: 269 DAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVG 328
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLE 417
NLHFN+TEDQLRQVFEPFGTVELVQLP D ETGHCKGFGFVQFARLEDAR A +LNGQL+
Sbjct: 329 NLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLD 388
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIA 477
I GR IKVS VTDQ+GLQD+GAN DDDEGGGLSLNARSRA+LMQKLDRSG+ IA
Sbjct: 389 IAGRTIKVSVVTDQAGLQDIGANAGDF-DDDEGGGLSLNARSRAILMQKLDRSGTTPGIA 447
Query: 478 GSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIF 537
GS +P +N+ LPL TAP+LGAA VS LV PLVQ VP G G LQVP +VP
Sbjct: 448 GSLGSPVLNNPGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSI 507
Query: 538 DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLR 597
DTIGVPSECL+LKNMFDPK ET +FD+DIKEDV+ ECSKFG +KHI+V+K+SAGFV+LR
Sbjct: 508 DTIGVPSECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLR 567
Query: 598 FENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
FENTQ+A +AQRALHGRWFAGKMITATFM+PQ YEAKFPDS
Sbjct: 568 FENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAKFPDS 608
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/640 (61%), Positives = 460/640 (71%), Gaps = 46/640 (7%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANG-DGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHR 59
MDFDEYEYLE VENP+ K ANG D +VKSE+R R+ SSK K D+ + H
Sbjct: 1 MDFDEYEYLENAVENPQA---KHRANGGDKSVKSEERGRNGSSKHKGDDDDDVDLHPKHS 57
Query: 60 SRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNG 119
G S D R R++R SS H S SRDG +DR R RD +RD +
Sbjct: 58 KPGDDSHDRER---LREKRGSSRHGSKSRDGDKDRSSGGIRDRKRDRDRDHEN------- 107
Query: 120 RDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREV 179
+DR RD G D D RDRE+D++ R++ + E ER +
Sbjct: 108 KDRKRDHG--------DKDVKRDRERDRDHGRDQERDRRDRGS-------EAERQQRSRS 152
Query: 180 IERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQ-V 238
D + +RE SRDRE + ERSRD++ K+R + RESR+ D++ RR KEKKE+
Sbjct: 153 RSDRHRTDLDDKDRETSRDREYRDIERSRDKDYKDRGRVRESRERDRQDRRHKEKKEEAT 212
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
EPE DPERDQRTVFAYQI LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY+EFY
Sbjct: 213 EPEADPERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFY 272
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS +S+A G GPYSGGAR+LYVG
Sbjct: 273 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVG 332
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
NLH ++TE +R+VFE FG VELVQLPLDE+GHCKGFGFVQFARLEDARNA +LNGQLEI
Sbjct: 333 NLHVSITEADIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEI 392
Query: 419 VGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GR IKVSAVTDQSG+Q++G NT DFDDDEGGGLSLNA SRA+LMQKLDRSG+A+++ G
Sbjct: 393 GGRTIKVSAVTDQSGMQEVGGNTG-DFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVG 451
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFD 538
S VN+T L LP + AA+ V L G LQ+PTA++P D
Sbjct: 452 SIGNSGVNNTGLNLPATGNILAAAPVGGLA---------------GGGLQIPTATIPSID 496
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRF 598
IGVPSECL+LKNMFDPK+ET +FD+DIKEDVE ECSKFG LKHI+V+K SAGFVYLRF
Sbjct: 497 PIGVPSECLMLKNMFDPKDETEPDFDLDIKEDVEAECSKFGALKHIYVDKKSAGFVYLRF 556
Query: 599 ENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
E+TQSA +AQ+ALHGRWFAGKMITA+FMVPQ+YE KFPDS
Sbjct: 557 EDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDKFPDS 596
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/638 (61%), Positives = 467/638 (73%), Gaps = 39/638 (6%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRS 60
MDFDEYEYLEK VENPE GD NVKSE+R R+ SSK K D+ + D
Sbjct: 1 MDFDEYEYLEKAVENPEV--NHRANGGDKNVKSEERGRNGSSKHKDDDDDDVVD---LHP 55
Query: 61 RGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGR 120
R SKS D SR+ +R++ER S+ H S SRDG +DR R RD +RD +
Sbjct: 56 RHSKSGDNSRDRERQRERGSTLHGSKSRDGDKDRNSGGSRDRRRDRDRDHE--------- 106
Query: 121 DRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVI 180
N+DR RD+ ERDH D+D ++D+E++R+++ S E E+ +
Sbjct: 107 --NKDRKRDK---ERDH-GDKDMKRDRERDRDRNRDQERDRRDRGS---EAEQEQRSRSR 157
Query: 181 ERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEP 240
D + +RE SRDRE +RERSRD++ K+RE+ RESR++D+E+RR KEKKE+
Sbjct: 158 SDRLRTDLDDKDREASRDREYRDRERSRDKDYKDRERVRESREHDRENRRHKEKKEETTE 217
Query: 241 EVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDV 300
DPERDQR VFAYQI LKADERDV+EFFSRAGKVRDVRLIMDRNSRRSKGVGY+EFYDV
Sbjct: 218 PADPERDQRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDV 277
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS +S+A G GPYSGGAR+LYVGNL
Sbjct: 278 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNL 337
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVG 420
H ++TE +R+VFE FG VELVQLPLDE+GHCKGFGFVQFARLEDARNA +LNGQLEI G
Sbjct: 338 HISITEADIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEIGG 397
Query: 421 RAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSA 480
R IKVSAVTDQSG+Q+ G NT DFDDDEGGG+SLNA SRA+LMQKLDRSG+A+++ GS
Sbjct: 398 RTIKVSAVTDQSGMQEFGGNTG-DFDDDEGGGMSLNACSRAMLMQKLDRSGTASSMVGSL 456
Query: 481 VTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTI 540
VN+T L LP + AA+ V L G LQ+PTA++P DTI
Sbjct: 457 GNSVVNNTGLNLPATGNILAAAPVGELA---------------GGGLQIPTATIPSIDTI 501
Query: 541 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFEN 600
GV SECL+LKNMFDPK+E +FD+DIKEDVE ECSK G LKHI+V+K SAGFVYLRFE+
Sbjct: 502 GVASECLMLKNMFDPKDEIEPDFDLDIKEDVEAECSKLGTLKHIYVDKKSAGFVYLRFED 561
Query: 601 TQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
TQSA +AQ+ALHGRWFAGKMITA+FMVPQ+YE KFPDS
Sbjct: 562 TQSAISAQQALHGRWFAGKMITASFMVPQSYEDKFPDS 599
>gi|297744588|emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/413 (79%), Positives = 357/413 (86%), Gaps = 3/413 (0%)
Query: 228 SRRPKEKKEQV-EPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
RR K+KKE+V EPE DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS
Sbjct: 15 CRRHKDKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 74
Query: 287 RRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG 346
RRSKGVGY+EFYD MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS ++ AG GG G
Sbjct: 75 RRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIG 134
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
PYSGGARRLYVGNLHFN+TEDQLRQVFEPFGTVELVQLP D ETGHCKGFGFVQFARLED
Sbjct: 135 PYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLED 194
Query: 406 ARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQ 465
AR A +LNGQL+I GR IKVS VTDQ+GLQD+GAN DDDEGGGLSLNARSRA+LMQ
Sbjct: 195 ARAAQSLNGQLDIAGRTIKVSVVTDQAGLQDIGANAGDF-DDDEGGGLSLNARSRAILMQ 253
Query: 466 KLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGT 525
KLDRSG+ IAGS +P +N+ LPL TAP+LGAA VS LV PLVQ VP G G
Sbjct: 254 KLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGA 313
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIF 585
LQVP +VP DTIGVPSECL+LKNMFDPK ET +FD+DIKEDV+ ECSKFG +KHI+
Sbjct: 314 GLQVPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIY 373
Query: 586 VEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
V+K+SAGFV+LRFENTQ+A +AQRALHGRWFAGKMITATFM+PQ YEAKFPDS
Sbjct: 374 VDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAKFPDS 426
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 309/393 (78%), Positives = 342/393 (87%), Gaps = 7/393 (1%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY+EFYDVMSVPM
Sbjct: 223 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPM 282
Query: 306 AIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMT 365
AIALSGQPLLGQPVMVKPSEAEKNLVQS +++ G+GPYSGGARRLYVGNLHFN+T
Sbjct: 283 AIALSGQPLLGQPVMVKPSEAEKNLVQSTTTV----NAGSGPYSGGARRLYVGNLHFNIT 338
Query: 366 EDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
EDQLRQVFEPFG VELVQLPLDETGHCKGFGFVQFARLEDA+NALNLNGQ+EI GR IKV
Sbjct: 339 EDQLRQVFEPFGIVELVQLPLDETGHCKGFGFVQFARLEDAKNALNLNGQVEIAGRPIKV 398
Query: 426 SAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAV 485
S VTDQ+G+QD N DDDEGGGL+LNARSRA+LMQKLDRSG+A++IAGS T A
Sbjct: 399 STVTDQTGMQDSTTNAGDF-DDDEGGGLALNARSRAILMQKLDRSGTASSIAGSLGTSAA 457
Query: 486 NSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSE 545
ST L +PTAP+LGAA + +V PL+ G+ P PG G ++Q+P A +P DTIGVPSE
Sbjct: 458 -STGLAVPTAPILGAAPVIPPIVAPLISGSAPAFPGLPGASVQLPGA-IPSVDTIGVPSE 515
Query: 546 CLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAF 605
CLLLKNMFDP ET +FD+DIKEDV+ ECSKFG L+HI+V+K+SAGFVYLRFENTQSA
Sbjct: 516 CLLLKNMFDPSIETEPDFDLDIKEDVQLECSKFGNLQHIYVDKNSAGFVYLRFENTQSAI 575
Query: 606 AAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
+AQRALHGRWFAGKMITATFMVPQ YE KFPDS
Sbjct: 576 SAQRALHGRWFAGKMITATFMVPQVYETKFPDS 608
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 383/642 (59%), Positives = 449/642 (69%), Gaps = 39/642 (6%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVE-DYDDDGHR 59
MDFDEYEYLEK VENP E GD VKSE + RSRSS+ + D+K E D D+DG R
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDGRR 60
Query: 60 SRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNG 119
S+ S+S SR+ DR ++R S S EHRDRD R++D D+EERNG
Sbjct: 61 SKRSRSHHRSRSRDRERDRHRS----------------SREHRDRD--REKDVDKEERNG 102
Query: 120 RDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREV 179
+DR RDR +DRD + RDH+ DR R ER +S E +R+ ++R RDR
Sbjct: 103 KDRERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQEREKSLEIEPKERETKDRDRDRRY 162
Query: 180 IERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKE-QV 238
E D + ++ + + E R S +R K+KKE +V
Sbjct: 163 TS-ELVIDFIIYVHWYCLLYNLMGHVPFKIIIVIEG-TSRASCVYAYWRKRHKDKKEDKV 220
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
EPE DPERDQRTVFAYQI L+A ERDVYEFFSRAGKVRDVR+IMDR SRRS+G+GYVEFY
Sbjct: 221 EPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFY 280
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
D MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS ++ A +GG GPYSGGARRLYVG
Sbjct: 281 DTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS-TTAAAGAGGMLGPYSGGARRLYVG 339
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
NLH NM+ED LR+VFE FG+VELVQ+P DETG CKGFGFVQFARLEDARNALNLNGQLEI
Sbjct: 340 NLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEI 399
Query: 419 VGRAIKVSAVTDQSGLQDLG-ANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIA 477
GRAIKVSAVTDQ+ + + G TTGD DDD+GGGLSLNA+SRALLMQKLDRSG+A++
Sbjct: 400 AGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS-- 457
Query: 478 GSAVTPAVNSTALPLPTAPLLGAASAVSTL-VPPLVQGTVPTHPGQLGTALQVPTASVPI 536
+ +T A A G S +S+L P LVQG+ P G G+ + +P
Sbjct: 458 -TGLTTA----------ASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGI-IPGVIPAG 505
Query: 537 FDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYL 596
FD IGVPSECLLLKNMFDP ET ++FD DIKEDV+ ECSKFGKL HIFV+K+S GFVYL
Sbjct: 506 FDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYL 565
Query: 597 RFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
RFEN Q+A AQRALHGRWFAGKMITAT+M + YEAKFP+S
Sbjct: 566 RFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPES 607
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 376/641 (58%), Positives = 437/641 (68%), Gaps = 86/641 (13%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVE-DYDDDGHR 59
MDFDEYEYLEK VENP E GD VKSE + RSRSS+ + D+K E D D+DG R
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDGRR 60
Query: 60 SRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNG 119
S+ S+S SR+ DR ++R SS EHRDRD R++D D+EERNG
Sbjct: 61 SKRSRSHHRSRSRDRERDRHR----------------SSREHRDRD--REKDVDKEERNG 102
Query: 120 RDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREV 179
+DR RDR +DRD + RDH EKD+ + ER
Sbjct: 103 KDRERDRDKDRDSKGRDH------EKDRSRRSRSRSERHRSQER---------------- 140
Query: 180 IERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVE 239
E+S + E KERE + RD + + ++K VE
Sbjct: 141 -------------------------EKSLEIEPKERETKDRDRDRRRHKDKKEDK---VE 172
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
PE DPERDQRTVFAYQI L+A ERDVYEFFSRAGKVRDVR+IMDR SRRS+G+GYVEFYD
Sbjct: 173 PEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYD 232
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS ++ A +GG GPYSGGARRLYVGN
Sbjct: 233 TMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAA-GAGGMLGPYSGGARRLYVGN 291
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
LH NM+ED LR+VFE FG+VELVQ+P DETG CKGFGFVQFARLEDARNALNLNGQLEI
Sbjct: 292 LHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIA 351
Query: 420 GRAIKVSAVTDQSGLQDLG-ANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GRAIKVSAVTDQ+ + + G TTGD DDD+GGGLSLNA+SRALLMQKLDRSG+A++
Sbjct: 352 GRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS--- 408
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTL-VPPLVQGTVPTHPGQLGTALQVPTASVPIF 537
+ +T A A G S +S+L P LVQG+ P G G+ + +P F
Sbjct: 409 TGLTTA----------ASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGI-IPGVIPAGF 457
Query: 538 DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLR 597
D IGVPSECLLLKNMFDP ET ++FD DIKEDV+ ECSKFGKL HIFV+K+S GFVYLR
Sbjct: 458 DPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLR 517
Query: 598 FENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
FEN Q+A AQRALHGRWFAGKMITAT+M + YEAKFP+S
Sbjct: 518 FENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPES 558
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 386/653 (59%), Positives = 447/653 (68%), Gaps = 72/653 (11%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVE-DYDDDGHR 59
MDFDEYEYLEK VENP E GD VKSE + RSRSS+ + D+K E D D+DG R
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDGRR 60
Query: 60 SRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNG 119
S+ S+S SR+ DR ++R SS EHRDRD R++D D+EERNG
Sbjct: 61 SKRSRSHHRSRSRDRERDRHR----------------SSREHRDRD--REKDVDKEERNG 102
Query: 120 RDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREV 179
+DR RDR +DRD + RDH EK S+S R ERE+S + E
Sbjct: 103 KDRERDRDKDRDSKGRDH--------------EKDRSRRSRSRSERHRSQEREKSLEIEP 148
Query: 180 IERE---RSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKE 236
ERE R RDR I ++ D L R+ R DK K++
Sbjct: 149 KERETKDRDRDRRFILMLLG---PLVLPSVQLDGALPCRDFSCFIRHKDK-------KED 198
Query: 237 QVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGK---------VRDVRLIMDRNSR 287
+VEPE DPERDQRTVFAYQI L+A ERDVYEFFSRAGK VRDVR+IMDR SR
Sbjct: 199 KVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVCPFLCRFHVRDVRIIMDRISR 258
Query: 288 RSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGP 347
RS+G+GYVEFYD MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS ++ A +GG GP
Sbjct: 259 RSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS-TTAAAGAGGMLGP 317
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDAR 407
YSGGARRLYVGNLH NM+ED LR+VFE FG+VELVQ+P DETG CKGFGFVQFARLEDAR
Sbjct: 318 YSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDAR 377
Query: 408 NALNLNGQLEIVGRAIKVSAVTDQSGLQDLG-ANTTGDFDDDEGGGLSLNARSRALLMQK 466
NALNLNGQLEI GRAIKVSAVTDQ+ + + G TTGD DDD+GGGLSLNA+SRALLMQK
Sbjct: 378 NALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQK 437
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTL-VPPLVQGTVPTHPGQLGT 525
LDRSG+A++ + +T A A G S +S+L P LVQG+ P G G+
Sbjct: 438 LDRSGTASS---TGLTTA----------ASFNGGVSTISSLAAPALVQGSFPAVAGLAGS 484
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIF 585
+ +P FD IGVPSECLLLKNMFDP ET ++FD DIKEDV+ ECSKFGKL HIF
Sbjct: 485 GI-IPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIF 543
Query: 586 VEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
V+K+S GFVYLRFEN Q+A AQRALHGRWFAGKMITAT+M + YEAKFP+S
Sbjct: 544 VDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPES 596
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 376/641 (58%), Positives = 435/641 (67%), Gaps = 87/641 (13%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVE-DYDDDGHR 59
MDFDEYEYLEK VENP E GD VKSE + RSRSS+ + D+K E D D+DG R
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDGRR 60
Query: 60 SRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNG 119
S+ S+S SR+ DR ++R SS EHRDRD R++D D+EERNG
Sbjct: 61 SKRSRSHHRSRSRDRERDRHR----------------SSREHRDRD--REKDVDKEERNG 102
Query: 120 RDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREV 179
+DR RDR +DRD + RDH EKD+ + ER
Sbjct: 103 KDRERDRDKDRDSKGRDH------EKDRSRRSRSRSERHRSQER---------------- 140
Query: 180 IERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVE 239
E+S + E KERE + RD + + ++K VE
Sbjct: 141 -------------------------EKSLEIEPKERETKDRDRDRRRHKDKKEDK---VE 172
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
PE DPERDQRTVFAYQI L+A ERDVYEFFSRAGKVRDVR+IMDR SRRS+G+GYVEFYD
Sbjct: 173 PEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYD 232
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS ++ A +GG GPYSGGARRLYVGN
Sbjct: 233 TMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAA-GAGGMLGPYSGGARRLYVGN 291
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
LH NM+ED LR+VFE FG+VELVQ+P DETG CKGFGFVQFARLEDARNALNLNGQLEI
Sbjct: 292 LHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIA 351
Query: 420 GRAIKVSAVTDQSGLQDLG-ANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GRAIKVSAVTDQ+ + + G TTGD DDD+GGGLSLNA+SRALLMQKLDRSG+A++
Sbjct: 352 GRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS--- 408
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTL-VPPLVQGTVPTHPGQLGTALQVPTASVPIF 537
+ +T A A G S +S+L P LVQG+ P G G +P F
Sbjct: 409 TGLTTA----------ASFNGGVSTISSLAAPALVQGSFPAVAGLAGGI--IPGVIPAGF 456
Query: 538 DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLR 597
D IGVPSECLLLKNMFDP ET ++FD DIKEDV+ ECSKFGKL HIFV+K+S GFVYLR
Sbjct: 457 DPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLR 516
Query: 598 FENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
FEN Q+A AQRALHGRWFAGKMITAT+M + YEAKFP+S
Sbjct: 517 FENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPES 557
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 373/613 (60%), Positives = 440/613 (71%), Gaps = 57/613 (9%)
Query: 31 VKSEDRVRSRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDG 90
+KS D+ SRSSK KSD K DD HRS+ KS DESR+ DR ++R SS HRS SR+
Sbjct: 1 MKSGDKHHSRSSKYKSDGK----DDGEHRSKHLKSDDESRDRDRHRDRTSSRHRSRSRER 56
Query: 91 GRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKE 150
RDR RSS E+R ++ DR+ +REER+ +DR+ DR D +R ++D+
Sbjct: 57 DRDRHRSSKENRGKE---DREGNREERSSKDRDVDR-----------DKERSHDRDRRGR 102
Query: 151 REKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDR 210
+ +R QS R RS + RD + RERSRD E+
Sbjct: 103 DGERNREREQSRRSRSRSERHRSDRDDGI--RERSRDNEL-------------------- 140
Query: 211 ELKEREKERESRDNDKESRRPKEKK-EQVEPEVDPERDQRTVFAYQICLKADERDVYEFF 269
+EREKERESR+ ++ RR K+KK E EPE DPERDQRTVFAYQI LKA ERDVYEFF
Sbjct: 141 --REREKERESRERGRDGRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFF 198
Query: 270 SRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN 329
SRAGKVRDVRLIMDRNSRRSKGVGYVEF D MSVPMAIALSGQ LL QPVMVKPSEAEKN
Sbjct: 199 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 258
Query: 330 LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDET 389
VQS S+ GG GPYSGGARRLYVGNLH N+TED LRQVF FGTVELVQ+P+DE+
Sbjct: 259 QVQSTSAAG-GPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDES 317
Query: 390 GHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDE 449
GHCKGFGF+QF RLEDARNAL+LNGQLEI GR IKVS VTDQ GLQD+GA +TGD D+++
Sbjct: 318 GHCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGA-STGDLDEED 376
Query: 450 GGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVP 509
GGGLSLNA SRA LMQKLDR+G+A++IAGS T VN+T +P AP+LG A+ +P
Sbjct: 377 GGGLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGAT-----IP 430
Query: 510 PLVQGT----VPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDM 565
L GT P PG LG +QVP + + +G PSECLLLKNMFDP E+ FD+
Sbjct: 431 SLSVGTSLAAFPAFPG-LGAGVQVPPVTANLLG-VGTPSECLLLKNMFDPTAESEPTFDL 488
Query: 566 DIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATF 625
DI++DVE ECS+FGKLKHI+V+++SAGFVYLRFE ++SA AQRAL+GRWFAGKMI ATF
Sbjct: 489 DIRDDVEEECSRFGKLKHIYVDRNSAGFVYLRFEKSESAMEAQRALNGRWFAGKMIGATF 548
Query: 626 MVPQTYEAKFPDS 638
M +YEAKFPDS
Sbjct: 549 MDIPSYEAKFPDS 561
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 373/641 (58%), Positives = 436/641 (68%), Gaps = 90/641 (14%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVE-DYDDDGHR 59
MDFDEYEYLEK VENP E GD VKSE R RSRSS+ + DEK E D D+DG R
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGRERSRSSRHRGDEKKERDEDEDGRR 60
Query: 60 SRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNG 119
S+ S+S SR+ DR ++R SS EHRDRD R++D D+EERNG
Sbjct: 61 SKRSRSHHRSRSRDRERDRHR----------------SSREHRDRD--REKDIDKEERNG 102
Query: 120 RDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREV 179
+DR RDR +DRD + RDH EKD+ + ER
Sbjct: 103 KDRERDRDKDRDGKGRDH------EKDRSRRSRSRSERHRSQER---------------- 140
Query: 180 IERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVE 239
E+S + E KERE + RD + + ++K VE
Sbjct: 141 -------------------------EKSLEIEPKERETKDRDRDRRRHKDKKEDK---VE 172
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
PE DPERDQRTVFAYQI L+A ERDVYEFFSRAGKVRDVR+IMDR SRRS+G+GYVEFYD
Sbjct: 173 PEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYD 232
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS ++ A +GG GPYSGGARRLYVGN
Sbjct: 233 TMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS-TTAAAGAGGMLGPYSGGARRLYVGN 291
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
LH NM+ED LR+VFEPFG+VELVQ+P DETG CKGFGFVQFARLEDARNALNLNGQLEI
Sbjct: 292 LHINMSEDDLRKVFEPFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIA 351
Query: 420 GRAIKVSAVTDQSGLQDLG-ANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GRAIKVSAVTDQ+ + + G TTGD DDD+GGGLSLNA+SRALLMQKLDRSG+A++
Sbjct: 352 GRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS--- 408
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTL-VPPLVQGTVPTHPGQLGTALQVPTASVPIF 537
+ +T A A + G S +S+L P LVQG+ P G G + +P +
Sbjct: 409 TGLTTA----------ASIHGGVSTISSLAAPALVQGSFPAVAGLAGAGI-IPG----VI 453
Query: 538 DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLR 597
D +GVPSECLLLKNMFDP +T ++FD DI+EDV+ ECSKFG L HI+V+K+S GFVYLR
Sbjct: 454 DPVGVPSECLLLKNMFDPSTQTEDDFDKDIEEDVKEECSKFGNLNHIYVDKNSVGFVYLR 513
Query: 598 FENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
FEN Q+A AQRALHGRWFAGKMITAT+M YEAKFP+S
Sbjct: 514 FENAQAAIGAQRALHGRWFAGKMITATYMTTVAYEAKFPES 554
>gi|326504734|dbj|BAK06658.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 369/664 (55%), Positives = 443/664 (66%), Gaps = 104/664 (15%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRS 60
MDFDEY+YLEK VE P + NG G R RS ++
Sbjct: 1 MDFDEYDYLEKAVEPSVP-----STNGGGEKDRSSRRRSSTA------------------ 37
Query: 61 RGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGR 120
G RD+ +ER S RS R+R RS EHRDR+ +++ DRE +
Sbjct: 38 -GGGGRDQ-------EERGSKRPRSGE---DRERHRSGREHRDREDGKEK-ADRE----K 81
Query: 121 DRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVI 180
R +D GRDR++ R+ D R REK +EK+ + E+ R E+E SRDRE +
Sbjct: 82 VREKDEGRDREK-VREKDGGRSREKVREKDESRD------PEKVR----EKEESRDREKV 130
Query: 181 -ERERSRDREVI-ERER-SRDREVIERERSRD------------------RELKEREKER 219
E++ SRDRE + E+ER RDR ++ERE R+ REL +RE+ER
Sbjct: 131 REKDGSRDREKVREKEREGRDR-LMERENGRERRSRSRSERRRGEEEEMVREL-QRERER 188
Query: 220 ESRDNDKESRRPKEKKEQ-VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDV 278
R D R + KK+ EPEVDPERDQRTVFA+Q+ LKADERDVYEFFSRAGKVRDV
Sbjct: 189 SDRHRDYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDV 248
Query: 279 RLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIA 338
RLIMDRNSRRSKGVGY+EFYDVMSVPMAIAL+GQPLLGQ VMVKPSEAEKNL QSN++
Sbjct: 249 RLIMDRNSRRSKGVGYIEFYDVMSVPMAIALTGQPLLGQAVMVKPSEAEKNLAQSNATSG 308
Query: 339 GASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGF 397
GA+ SGGAR+LYVGNLH N+TEDQLRQVFEPFG VELVQLP+D TG CKGFGF
Sbjct: 309 GAA-------SGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGF 361
Query: 398 VQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNA 457
+QFARLEDA+ A +LNGQL+I GR IKVSAVTDQ G+Q LG TTGD DDDEGGGL+LNA
Sbjct: 362 IQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDQGGVQ-LG-TTTGDLDDDEGGGLALNA 419
Query: 458 RSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGA-ASAVSTLVPPLVQGTV 516
SRALLM+KLDRSG+AT++ G P +NS+ + LP A +LGA +A S LV P+ G V
Sbjct: 420 SSRALLMRKLDRSGTATSLTGGIGAPGLNSS-VGLPAASVLGAPLTAASLLVQPV--GAV 476
Query: 517 PTHPGQLGTALQVPTASVPIFDT---IGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEG 573
P P +PI IG P+E LLLKNMFDP ET +FD+DI++DV+
Sbjct: 477 PGAP-------------LPIISQSADIGTPTEFLLLKNMFDPSVETDPDFDLDIRDDVQE 523
Query: 574 ECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
ECSKFG +KHIFV+K +AGFVYL F++ +A +AQR+LHGRWFAGKMITATFM YE
Sbjct: 524 ECSKFGVVKHIFVDKHTAGFVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTAHQYEM 583
Query: 634 KFPD 637
KFPD
Sbjct: 584 KFPD 587
>gi|326523595|dbj|BAJ92968.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 369/664 (55%), Positives = 442/664 (66%), Gaps = 104/664 (15%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRS 60
MDFDEY+YLEK VE P + NG G R RS ++
Sbjct: 1 MDFDEYDYLEKAVEPSVP-----STNGGGEKDRSSRRRSSTA------------------ 37
Query: 61 RGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGR 120
G RD+ +ER S RS R+R RS EHRDR+ +++ DRE +
Sbjct: 38 -GGGGRDQ-------EERGSKRPRSGE---DRERHRSGREHRDREDGKEK-ADRE----K 81
Query: 121 DRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVI 180
R +D GRDR++ R+ D R REK +EK+ + E+ R E+E SRDRE +
Sbjct: 82 VREKDEGRDREK-VREKDGGRSREKVREKDESRD------PEKVR----EKEESRDREKV 130
Query: 181 -ERERSRDREVI-ERER-SRDREVIERERSRD------------------RELKEREKER 219
E++ SRDRE + E+ER RDR ++ERE R+ REL +RE+ER
Sbjct: 131 REKDGSRDREKVREKEREGRDR-LMERENGRERRSRSRSERRRGEEEEMVREL-QRERER 188
Query: 220 ESRDNDKESRRPKEKKEQ-VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDV 278
R D R + KK+ EPEVDPERDQRTVFA+Q+ LKADERDVYEFFSRAGKVRDV
Sbjct: 189 SDRHRDYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDV 248
Query: 279 RLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIA 338
RLIMDRNSRRSKGVGY+EFYDVMSVPMAIAL+GQPLLGQ VMVKPSEAEKNL QSN++
Sbjct: 249 RLIMDRNSRRSKGVGYIEFYDVMSVPMAIALTGQPLLGQAVMVKPSEAEKNLAQSNATSG 308
Query: 339 GASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGF 397
GA+ SGGAR+LYVGNLH N+TEDQLRQVFEPFG VELVQLP+D TG CKGFGF
Sbjct: 309 GAA-------SGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGF 361
Query: 398 VQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNA 457
+QFARLEDA+ A +LNGQL+I GR IKVSAVTDQ G+Q LG TTGD DDDEGGGL+LNA
Sbjct: 362 IQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDQGGVQ-LG-TTTGDLDDDEGGGLALNA 419
Query: 458 RSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGA-ASAVSTLVPPLVQGTV 516
SRALLM+KLDRSG+AT++ G P +NS+ + LP A LGA +A S LV P+ G V
Sbjct: 420 SSRALLMRKLDRSGTATSLTGGIGAPGLNSS-VGLPAASALGAPLTAASLLVQPV--GAV 476
Query: 517 PTHPGQLGTALQVPTASVPIFDT---IGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEG 573
P P +PI IG P+E LLLKNMFDP ET +FD+DI++DV+
Sbjct: 477 PGAP-------------LPIISQSADIGTPTEFLLLKNMFDPSVETDPDFDLDIRDDVQE 523
Query: 574 ECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
ECSKFG +KHIFV+K +AGFVYL F++ +A +AQR+LHGRWFAGKMITATFM YE
Sbjct: 524 ECSKFGVVKHIFVDKHTAGFVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTAHQYEM 583
Query: 634 KFPD 637
KFPD
Sbjct: 584 KFPD 587
>gi|326494786|dbj|BAJ94512.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 368/664 (55%), Positives = 442/664 (66%), Gaps = 104/664 (15%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRS 60
MDFDEY+YLEK VE P + NG G R RS ++
Sbjct: 1 MDFDEYDYLEKAVEPSVP-----STNGGGEKDRSSRRRSSTA------------------ 37
Query: 61 RGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGR 120
G RD+ +ER S RS R+R RS EHRDR+ +++ DRE +
Sbjct: 38 -GGGGRDQ-------EERGSKRPRSGE---DRERHRSGREHRDREDGKEK-ADRE----K 81
Query: 121 DRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVI 180
R +D GRDR++ R+ D R REK +EK+ + E+ R E+E SRDRE +
Sbjct: 82 VREKDEGRDREK-VREKDGGRSREKVREKDESRD------PEKVR----EKEESRDREKV 130
Query: 181 -ERERSRDREVI-ERER-SRDREVIERERSRD------------------RELKEREKER 219
E++ SRDRE + E+ER RDR ++ERE R+ REL +RE+ER
Sbjct: 131 REKDGSRDREKVREKEREGRDR-LMERENGRERRSRSRSERRRGEEEEMVREL-QRERER 188
Query: 220 ESRDNDKESRRPKEKKEQ-VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDV 278
R D R + KK+ EPEVDPERDQRTVFA+Q+ LKADERD YEFFSRAGKVRDV
Sbjct: 189 SDRHRDYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSLKADERDAYEFFSRAGKVRDV 248
Query: 279 RLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIA 338
RLIMDRNSRRSKGVGY+EFYDVMSVPMAIAL+GQPLLGQ VMVKPSEAEKNL QSN++
Sbjct: 249 RLIMDRNSRRSKGVGYIEFYDVMSVPMAIALTGQPLLGQAVMVKPSEAEKNLAQSNATSG 308
Query: 339 GASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGF 397
GA+ SGGAR+LYVGNLH N+TEDQLRQVFEPFG VELVQLP+D TG CKGFGF
Sbjct: 309 GAA-------SGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGF 361
Query: 398 VQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNA 457
+QFARLEDA+ A +LNGQL+I GR IKVSAVTDQ G+Q LG TTGD DDDEGGGL+LNA
Sbjct: 362 IQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDQGGVQ-LG-TTTGDLDDDEGGGLALNA 419
Query: 458 RSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGA-ASAVSTLVPPLVQGTV 516
SRALLM+KLDRSG+AT++ G P +NS+ + LP A +LGA +A S LV P+ G V
Sbjct: 420 SSRALLMRKLDRSGTATSLTGGIGAPGLNSS-VGLPAASVLGAPLTAASLLVQPV--GAV 476
Query: 517 PTHPGQLGTALQVPTASVPIFDT---IGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEG 573
P P +PI IG P+E LLLKNMFDP ET +FD+DI++DV+
Sbjct: 477 PGAP-------------LPIISQSADIGTPTEFLLLKNMFDPSVETDPDFDLDIRDDVQE 523
Query: 574 ECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
ECSKFG +KHIFV+K +AGFVYL F++ +A +AQR+LHGRWFAGKMITATFM YE
Sbjct: 524 ECSKFGVVKHIFVDKHTAGFVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTAHQYEM 583
Query: 634 KFPD 637
KFPD
Sbjct: 584 KFPD 587
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 297/414 (71%), Positives = 335/414 (80%), Gaps = 18/414 (4%)
Query: 228 SRRPKEKKE-QVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
RR K+KKE +VEPE DPERDQRTVFAYQI L+A ERDVYEFFSRAGKVRDVR+IMDR S
Sbjct: 19 CRRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRIS 78
Query: 287 RRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG 346
RRS+G+GYVEFYD MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS ++ A +GG G
Sbjct: 79 RRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTA-AAGAGGMLG 137
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDA 406
PYSGGARRLYVGNLH NM+ED LR+VFE FG+VELVQ+P DETG CKGFGFVQFARLEDA
Sbjct: 138 PYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDA 197
Query: 407 RNALNLNGQLEIVGRAIKVSAVTDQSGLQDLG-ANTTGDFDDDEGGGLSLNARSRALLMQ 465
RNALNLNGQLEI GRAIKVSAVTDQ+ + + G TTGD DDD+GGGLSLNA+SRALLMQ
Sbjct: 198 RNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQ 257
Query: 466 KLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTL-VPPLVQGTVPTHPGQLG 524
KLDRSG+A++ + +T A A G S +S+L P LVQG+ P G G
Sbjct: 258 KLDRSGTASS---TGLTTA----------ASFNGGVSTISSLAAPALVQGSFPAVAGLAG 304
Query: 525 TALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHI 584
+ + +P FD IGVPSECLLLKNMFDP ET ++FD DIKEDV+ ECSKFGKL HI
Sbjct: 305 SGI-IPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHI 363
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
FV+K+S GFVYLRFEN Q+A AQRALHGRWFAGKMITAT+M + YEAKFP+S
Sbjct: 364 FVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPES 417
>gi|357146380|ref|XP_003573971.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 597
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 372/666 (55%), Positives = 445/666 (66%), Gaps = 102/666 (15%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRS 60
MDFDEY+YLEK VE P P + NG G E SR D D+
Sbjct: 1 MDFDEYDYLEKAVEPPVP-----STNGAG----EKDRSSRRRSSTGGGGGRDQDE----- 46
Query: 61 RGSKSRDESRNHDRRKERDSSCHRSWSRDG-GRDRPRSSWEHRDRD--TERDRDRDREER 117
RGSK R G R+R RSS EHRDRD E+D RDRE
Sbjct: 47 RGSKR---------------------PRSGEDRERHRSSREHRDRDDGKEKDGSRDRE-- 83
Query: 118 NGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDR 177
+ R +D GRDR++ R+ D R REK +EK+ G E+ R E++ RDR
Sbjct: 84 --KVREKDEGRDREK-VREKDGGRSREKVREKD------EGRDPEKVR----EKDEGRDR 130
Query: 178 EVI-ERERSRDREVI-ERER-SRDREVIERERSRD------------------RELKERE 216
E I E++ SRDR+ + E+ER RDR ++ERE R+ REL +RE
Sbjct: 131 EKIREKDSSRDRDKVREKERDGRDR-LMERENGRERRSRSRSERRRGEEEEMVREL-QRE 188
Query: 217 KERESRDNDKESRRPKEKKEQ-VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKV 275
+ER R D R + KK+ EPEVDPERDQRTVFA+Q+ LKADERDVYEFFSRAGKV
Sbjct: 189 RERSDRHRDYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKV 248
Query: 276 RDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNS 335
RDVRLIMDRNSRRSKGVGY+EFYDVMSVPMAIAL+GQPLLGQ VMVKPSEAEKNL QSN+
Sbjct: 249 RDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALTGQPLLGQAVMVKPSEAEKNLAQSNA 308
Query: 336 SIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKG 394
+ GA+ SGGAR+LYVGNLH N+TEDQLRQVFEPFG VELVQLP+D TG CKG
Sbjct: 309 ASGGAA-------SGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKG 361
Query: 395 FGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLS 454
FGF+QFARLEDA+ A +LNGQL+I GR IKVSAVTDQ G+Q LG TTGD DDDEGGGL+
Sbjct: 362 FGFIQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDQGGVQ-LGGTTTGDLDDDEGGGLA 420
Query: 455 LNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQG 514
LNA SRALLM+KLDRSG+AT++ G P +N T++ LP A + GA A ++ +
Sbjct: 421 LNASSRALLMRKLDRSGTATSLTGGIGAPGLN-TSVGLPAASVFGAPLAAAS-----LAP 474
Query: 515 TVPTHPGQLGTALQVPTASVPIFDT---IGVPSECLLLKNMFDPKNETYEEFDMDIKEDV 571
T+PT +G VP A +P+ IG P+E LLLKNMFDP ET +FD+DI++DV
Sbjct: 475 TIPT----VGA---VPGAPLPVISQSADIGTPTEFLLLKNMFDPAVETDPDFDLDIRDDV 527
Query: 572 EGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTY 631
+ ECSKFG +KHIFV+K +AGFVYL F+++ +A +AQR+LHGRWFAGKMITATFM Q Y
Sbjct: 528 QEECSKFGVVKHIFVDKHTAGFVYLHFDSSTAATSAQRSLHGRWFAGKMITATFMTAQQY 587
Query: 632 EAKFPD 637
E KFPD
Sbjct: 588 EMKFPD 593
>gi|224080644|ref|XP_002306193.1| predicted protein [Populus trichocarpa]
gi|222849157|gb|EEE86704.1| predicted protein [Populus trichocarpa]
Length = 348
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 269/357 (75%), Positives = 300/357 (84%), Gaps = 10/357 (2%)
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
MDRNSRRSKGVGY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS +++ S
Sbjct: 1 MDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSTTAVT--S 58
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFA 401
GG TGPYSGGARRLYVGNLHFN+TEDQLRQVFEPFG VELVQLP DE+GHCKGFGFVQFA
Sbjct: 59 GGLTGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPHDESGHCKGFGFVQFA 118
Query: 402 RLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRA 461
RLEDARNALNLNGQ+EI GR IKVSAVTDQ+G QD G N DDDEGGGL+LNARSRA
Sbjct: 119 RLEDARNALNLNGQVEIAGRPIKVSAVTDQTGTQDGGTNVGDF-DDDEGGGLALNARSRA 177
Query: 462 LLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPG 521
LLMQKLDR+G+A++IAGS TP LPTAP+LGA VS V PL+ G+VP PG
Sbjct: 178 LLMQKLDRTGTASSIAGSLGTPT-------LPTAPILGATPVVSPAVAPLLSGSVPAIPG 230
Query: 522 QLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKL 581
LQ+P ++P DTIGVPS+CL LKNMFDPK ET +FD+DIKEDV+ ECS+FG +
Sbjct: 231 LPVPGLQLPATAIPTMDTIGVPSDCLFLKNMFDPKTETEPDFDLDIKEDVQEECSRFGNV 290
Query: 582 KHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
KHI+V+K+SAGFVY+RFEN Q+A AQ ALHGRWFAGK+ITATFMVPQTYEAKFPDS
Sbjct: 291 KHIYVDKNSAGFVYMRFENMQAAINAQHALHGRWFAGKLITATFMVPQTYEAKFPDS 347
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/418 (64%), Positives = 314/418 (75%), Gaps = 38/418 (9%)
Query: 226 KESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN 285
+ESRR KEKK+ EPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRN
Sbjct: 208 RESRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 267
Query: 286 SRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT 345
SRRSKGVGYVEFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN++ GASG
Sbjct: 268 SRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTT--GASGA-- 323
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLE 404
GPY R+LYVGNLHFNMTE LR++FE FG VELVQLPLD E+GHCKGFGFVQFA LE
Sbjct: 324 GPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLE 383
Query: 405 DARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLM 464
A+ A +LNG+LEI GR IKVS+VTD G Q+ A + D DDDEGGGL+LNA+SRALLM
Sbjct: 384 HAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSN-DLDDDEGGGLALNAQSRALLM 442
Query: 465 QKLDRSGSATTIAGSAVTPAVN-------STALPLPTAPLLGAASAVSTLVPPLVQGTVP 517
QKLDR+G AT+IAGS P +N ST+LP+ + A + PP++Q
Sbjct: 443 QKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQ---- 498
Query: 518 THPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSK 577
++G PSECLLLKNMFDP ET +FDM+IKEDVE ECSK
Sbjct: 499 ---------------------SVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSK 537
Query: 578 FGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+G++KHI+V+K+SAG VYL+++ ++A AQRA+H RWFAG+ I+ FM PQ YEAKF
Sbjct: 538 YGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKF 595
>gi|356516321|ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max]
Length = 549
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 272/413 (65%), Positives = 315/413 (76%), Gaps = 29/413 (7%)
Query: 226 KESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN 285
++SRR ++KKE EPE DPERDQRTVFAYQ+ LKA ERD YEFFS+AGKVRDVRLIMDRN
Sbjct: 159 RDSRRFRDKKEAAEPEADPERDQRTVFAYQMPLKASERDAYEFFSKAGKVRDVRLIMDRN 218
Query: 286 SRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT 345
SRRSKGVGY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN++ A G
Sbjct: 219 SRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAA--GVV 276
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLE 404
GPY R+LYVGNLHFNMTE QLR++FEPFG VE+VQLPLD ETGHCKGFGFVQFA LE
Sbjct: 277 GPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFAHLE 336
Query: 405 DARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLM 464
A+ A +LNG+LEI GR IKVS+VTD G QD A + DFDDDE GGLSLNA+SRALLM
Sbjct: 337 HAKAAQSLNGKLEIAGRTIKVSSVTDHVGNQDTTAK-SADFDDDE-GGLSLNAQSRALLM 394
Query: 465 QKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLG 524
QKLDRSG A +I LP A G++ A ++P G VP
Sbjct: 395 QKLDRSGIAASIG--------------LPIAN--GSSPAQQAIMPIGNPGIVP------A 432
Query: 525 TALQVPT--ASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLK 582
A VPT +P+ + +G PSECLLLKNMFDP ET +FD+DIKEDVE ECSK+G++K
Sbjct: 433 VAPAVPTQIMPIPVTEPVGNPSECLLLKNMFDPNTETEPDFDLDIKEDVEEECSKYGRVK 492
Query: 583 HIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
HI+V+K SAGFVYL+FE ++A AAQRA+H RWFAG+MI+A +M+PQ YE KF
Sbjct: 493 HIYVDKRSAGFVYLQFETVEAASAAQRAMHTRWFAGRMISAIYMLPQMYETKF 545
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/418 (64%), Positives = 313/418 (74%), Gaps = 38/418 (9%)
Query: 226 KESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN 285
+ESRR KEKK EPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRN
Sbjct: 208 RESRRMKEKKGTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 267
Query: 286 SRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT 345
SRRSKGVGYVEFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN++ GASG
Sbjct: 268 SRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTT--GASGA-- 323
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLE 404
GPY R+LYVGNLHFNMTE LR++FE FG VELVQLPLD E+GHCKGFGFVQFA LE
Sbjct: 324 GPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLE 383
Query: 405 DARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLM 464
A+ A +LNG+LEI GR IKVS+VTD G Q+ A + D DDDEGGGL+LNA+SRALLM
Sbjct: 384 HAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSN-DLDDDEGGGLALNAQSRALLM 442
Query: 465 QKLDRSGSATTIAGSAVTPAVN-------STALPLPTAPLLGAASAVSTLVPPLVQGTVP 517
QKLDR+G AT+IAGS P +N ST+LP+ + A + PP++Q
Sbjct: 443 QKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQ---- 498
Query: 518 THPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSK 577
++G PSECLLLKNMFDP ET +FDM+IKEDVE ECSK
Sbjct: 499 ---------------------SVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSK 537
Query: 578 FGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+G++KHI+V+K+SAG VYL+++ ++A AQRA+H RWFAG+ I+ FM PQ YEAKF
Sbjct: 538 YGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKF 595
>gi|296082546|emb|CBI21551.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/432 (64%), Positives = 325/432 (75%), Gaps = 24/432 (5%)
Query: 205 ERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERD 264
E RDREL+ER +E E R ESRR K+KKE VEPE DPERDQRTVFAYQ+ LKA ERD
Sbjct: 92 ESDRDRELRERSREIEPR----ESRRFKDKKEAVEPEADPERDQRTVFAYQMPLKATERD 147
Query: 265 VYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 324
VYEFFS+AGKVRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSG L GQPVMVKPS
Sbjct: 148 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPS 207
Query: 325 EAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQL 384
EAEKNLVQSN+S SGG GPY R+LYVGNLHFNMTE QLRQ+FEPFG VELVQL
Sbjct: 208 EAEKNLVQSNAS-GAVSGGIAGPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQL 266
Query: 385 PLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTG 443
PLD ETG CKGFGFVQFA LE A+ A NLNG+L+I GR IKVS+VTD G+QD GA
Sbjct: 267 PLDLETGQCKGFGFVQFAELEHAKAAQNLNGKLDIAGRIIKVSSVTDHIGVQDAGAKAAD 326
Query: 444 DFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASA 503
DDD+GGGLSLNA+SRALLMQKLDR+G A++IAGS P +N +A P A
Sbjct: 327 F-DDDDGGGLSLNAQSRALLMQKLDRTGIASSIAGSLGVPMLNGSA---PN------QQA 376
Query: 504 VSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEF 563
+S + + P P Q+ T+ P + +G P+ECLLLKNMFDP E +F
Sbjct: 377 ISLSINGQAAVSAPALPTQVVTS--------PASEPVGTPTECLLLKNMFDPATEIDPDF 428
Query: 564 DMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITA 623
D+DIKE+V+ ECS FG++KHI+VEK SAG+VYLRFE ++A AQRA+H RWFA ++I+A
Sbjct: 429 DLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLRFETVEAAVTAQRAMHMRWFARRLISA 488
Query: 624 TFMVPQTYEAKF 635
F+ P+ YEAKF
Sbjct: 489 IFLQPRDYEAKF 500
>gi|413934153|gb|AFW68704.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
gi|413934154|gb|AFW68705.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 536
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 332/639 (51%), Positives = 391/639 (61%), Gaps = 106/639 (16%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRS 60
M+FDEYEYLEK VE P ANG G+ G +
Sbjct: 1 MEFDEYEYLEKAVEPAPP-----PANGSGS--------------------------GEKD 29
Query: 61 RGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGR 120
RGS RR+E D GR RS R+G
Sbjct: 30 RGS----------RRREGDE----------GRISKRS-------------------RSGE 50
Query: 121 DRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVI 180
DR +RGR R RE RDR+KD KE+E+S S R + E
Sbjct: 51 DR--ERGRHRSVREH-----RDRDKDDGKEKERSRDS-----RGKDRDREGREREKERGD 98
Query: 181 ERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEP 240
ER E E E E+ER R + ++ + K + EP
Sbjct: 99 RHRPREREVERERRSLSRSERRRIEEEEMVRELEMERERSERHHYRDRDVRRRKDDGAEP 158
Query: 241 EVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDV 300
EVDPERDQRTVFA+Q+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY+EFYDV
Sbjct: 159 EVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDV 218
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
MSVPMAIALSGQPLLGQ VMVKPSEAEKNLVQSN++ GA+ SGGAR+LYVGNL
Sbjct: 219 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAA-------SGGARKLYVGNL 271
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
H N+TEDQLRQVFEPFG VELVQLPLD TG CKG+GF+QFARLEDA+ A +LNGQL+I
Sbjct: 272 HSNITEDQLRQVFEPFGQVELVQLPLDAMTGLCKGYGFIQFARLEDAKAAQSLNGQLDIA 331
Query: 420 GRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGS 479
GR IKVSAVTD G+Q GA TTGD DDDEGGGL+LNA SRA LM KLDRSG+AT++ G
Sbjct: 332 GRVIKVSAVTDHVGVQASGA-TTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTG- 389
Query: 480 AVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGTALQVPTASVPIFD 538
+ + + +P ++GAA A S L P + G+VP P TA V
Sbjct: 390 ----GIGAAGVAVPATSVIGAAGAASLLSPTVSAVGSVPGAPVLPITAQNV--------- 436
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRF 598
+ P+E LLLKNMFDP ET +FD+DI++DV+ ECSKFG +KHIFV+K++AGFVYL+F
Sbjct: 437 IMSTPTEFLLLKNMFDPSLETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQF 496
Query: 599 ENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
++ +A AQ+ALHGRWFAGKMITATFM Q Y KFP+
Sbjct: 497 DSVTAAGKAQQALHGRWFAGKMITATFMSDQEYSTKFPN 535
>gi|224034337|gb|ACN36244.1| unknown [Zea mays]
Length = 410
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 280/430 (65%), Positives = 329/430 (76%), Gaps = 25/430 (5%)
Query: 210 RELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFF 269
REL E E+ER R + ++ + K + EPEVDPERDQRTVFA+Q+ LKADERDVYEFF
Sbjct: 3 REL-EMERERSERHHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSLKADERDVYEFF 61
Query: 270 SRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN 329
SRAGKVRDVRLIMDRNSRRSKGVGY+EFYDVMSVPMAIALSGQPLLGQ VMVKPSEAEKN
Sbjct: 62 SRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQAVMVKPSEAEKN 121
Query: 330 LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE- 388
LVQSN++ GA+ SGGAR+LYVGNLH N+TEDQLRQVFEPFG VELVQLPLD
Sbjct: 122 LVQSNATSGGAA-------SGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPLDAM 174
Query: 389 TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDD 448
TG CKG+GF+QFARLEDA+ A +LNGQL+I GR IKVSAVTD G+Q GA TTGD DDD
Sbjct: 175 TGLCKGYGFIQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDHVGVQASGA-TTGDLDDD 233
Query: 449 EGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLV 508
EGGGL+LNA SRA LM KLDRSG+AT++ G + + + +P ++GAA A S L
Sbjct: 234 EGGGLALNASSRAALMLKLDRSGTATSLTG-----GIGAAGVAVPATSVIGAAGAASLLS 288
Query: 509 PPL-VQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDI 567
P + G+VP P TA V + P+E LLLKNMFDP ET +FD+DI
Sbjct: 289 PTVSAVGSVPGAPVLPITAQNV---------IMSTPTEFLLLKNMFDPSLETDPDFDLDI 339
Query: 568 KEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMV 627
++DV+ ECSKFG +KHIFV+K++AGFVYL+F++ +A AQ+ALHGRWFAGKMITATFM
Sbjct: 340 RDDVQDECSKFGAVKHIFVDKNTAGFVYLQFDSVTAAGKAQQALHGRWFAGKMITATFMS 399
Query: 628 PQTYEAKFPD 637
Q Y KFP+
Sbjct: 400 DQEYSTKFPN 409
>gi|242039571|ref|XP_002467180.1| hypothetical protein SORBIDRAFT_01g021020 [Sorghum bicolor]
gi|241921034|gb|EER94178.1| hypothetical protein SORBIDRAFT_01g021020 [Sorghum bicolor]
Length = 535
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/406 (67%), Positives = 317/406 (78%), Gaps = 24/406 (5%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K + EPEVDPERDQRTVFA+Q+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 151 KDDGAEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 210
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYDVMSVPMAIALSGQPLLGQ VMVKPSEAEKNLVQSN++ GA+ SGGAR
Sbjct: 211 YIEFYDVMSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAA-------SGGAR 263
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNL 412
+LYVGNLH N+TEDQLRQVFEPFG VELVQLPLD TG CKG+GF+QFARLEDA+ A +L
Sbjct: 264 KLYVGNLHSNITEDQLRQVFEPFGQVELVQLPLDPMTGLCKGYGFIQFARLEDAKAAQSL 323
Query: 413 NGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
NGQL+I GR IKVSAVTD G+Q GA TTGD DDDEGGGL+LNA SRA LM KLDRSG+
Sbjct: 324 NGQLDIAGRVIKVSAVTDHVGVQASGA-TTGDLDDDEGGGLALNASSRAALMLKLDRSGT 382
Query: 473 ATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ-GTVPTHPGQLGTALQVPT 531
AT++ G + + + LP ++GA A S L P + G+VP P L V T
Sbjct: 383 ATSLTG-----GIGAAGVSLPATSVIGAPGAASLLSPTVAAVGSVPGAP-----VLPVTT 432
Query: 532 ASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA 591
+V + P+E LLLKNMFDP ET +FD+DI++DV+ ECSKFG +KHIFV+K++A
Sbjct: 433 QNV----IMSTPTEFLLLKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTA 488
Query: 592 GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
GFVYL+F++ +A AQ+ALHGRWFAGKMITATFM Q Y KFP+
Sbjct: 489 GFVYLQFDSVAAAGKAQQALHGRWFAGKMITATFMSAQEYSTKFPN 534
>gi|297811089|ref|XP_002873428.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319265|gb|EFH49687.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 520
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 309/553 (55%), Positives = 385/553 (69%), Gaps = 58/553 (10%)
Query: 99 WEHRDRDTER-DRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRS 157
+E+ ++ E D +E +G +++ R R+ ER HD + E+ +KS
Sbjct: 6 YEYLEKTVEEGDGSNKNKESSGNEKSERSYRKREGGER-HDEEGGDEERGSSRSKKSRGD 64
Query: 158 GSQS---ERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKE 214
G ++ ER+RS RD ++R RD+ RE SRD+E S++R+ +R+++RDRE +E
Sbjct: 65 GEENGKRERHRSSRD-KDRERDKV---REGSRDKESDRERSSKERDRSDRDKTRDRERRE 120
Query: 215 REKERESRDNDKE---------SRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDV 265
RE+ SR +E SRR K+KK+ EPE DPERDQRTVFAYQ+ LKA ERDV
Sbjct: 121 RERRSSSRSRREEREREVVERGSRRHKDKKD--EPEADPERDQRTVFAYQMPLKATERDV 178
Query: 266 YEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSE 325
YEFFS+AGKVRDVRLIMDRNSRRSKGVGY+EFYDVMSVPMAIALSGQP LGQPVMVKPSE
Sbjct: 179 YEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPFLGQPVMVKPSE 238
Query: 326 AEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLP 385
AEKNL QSN+ + GGTGP R+LYVGNLHFNMTE QLRQ+FE FG VELVQLP
Sbjct: 239 AEKNLAQSNT-----TPGGTGPVD---RKLYVGNLHFNMTELQLRQIFEAFGPVELVQLP 290
Query: 386 LD-ETGHCKGFGFVQFARLEDARNA-LNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTG 443
LD ETG CKGFGF+QFA+LE ++ A ++LNG+LEI GR IKVS+V+D G QD A +
Sbjct: 291 LDPETGQCKGFGFIQFAQLEHSKAAQISLNGKLEIAGRTIKVSSVSDHIGTQD-AAPKSA 349
Query: 444 DFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASA 503
DFDDD+GGGL+LNA+SRALLMQKLDRSG AT+I GS P +N A P
Sbjct: 350 DFDDDDGGGLALNAQSRALLMQKLDRSGIATSIVGSLGVPGLNGAAFNQP---------- 399
Query: 504 VSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIF--DTIGVPSECLLLKNMFDPKNETYE 561
G P+ P + +PT ++P F + +G PSECLLLKNMFDP ET
Sbjct: 400 ----------GMNPSFPTPV-----LPTTAIPSFVNEPVGQPSECLLLKNMFDPATETER 444
Query: 562 EFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMI 621
+FD +I+EDV ECSK+G++ HI+V+K+SAGFVYLRF++ ++A AAQRA+H RWFA KMI
Sbjct: 445 DFDFEIREDVADECSKYGEVNHIYVDKNSAGFVYLRFQSVEAAVAAQRAMHMRWFAQKMI 504
Query: 622 TATFMVPQTYEAK 634
+ATFM P YEAK
Sbjct: 505 SATFMPPHEYEAK 517
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 12/126 (9%)
Query: 1 MDFDEYEYLEKMVENPEPA-KEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHR 59
M+FDEYEYLEK VE + + K KE++ GN KSE R R + DE E D++
Sbjct: 1 MEFDEYEYLEKTVEEGDGSNKNKESS---GNEKSERSYRKREGGERHDE--EGGDEERGS 55
Query: 60 SRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNG 119
SR KSR + + +R+ HRS SRD R+R + RD++++R+R +R+
Sbjct: 56 SRSKKSRGDGEENGKRER-----HRS-SRDKDRERDKVREGSRDKESDRERSSKERDRSD 109
Query: 120 RDRNRD 125
RD+ RD
Sbjct: 110 RDKTRD 115
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/424 (62%), Positives = 311/424 (73%), Gaps = 28/424 (6%)
Query: 216 EKERESRD-NDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGK 274
E++R RD +++ RR ++KKE VEPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGK
Sbjct: 168 ERDRGERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 227
Query: 275 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSN 334
VRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN
Sbjct: 228 VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN 287
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCK 393
+S A GPY R+LYVGNLHFNMTE LR++FEPFG +E+VQLPLD ETGHCK
Sbjct: 288 ASSGAAV---VGPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCK 344
Query: 394 GFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGL 453
GFGFVQFA LE A+ A +LNG+LEI GR IKVS+VTD G QD + DFDDDE GGL
Sbjct: 345 GFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHVGSQDT-TTKSADFDDDE-GGL 402
Query: 454 SLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ 513
+LNA SRALLMQ+L + T I S P VN + P+ A S +P
Sbjct: 403 TLNAHSRALLMQRL----AGTDITTSIGVPTVNG------SVPVQQAFS-----MPFGNP 447
Query: 514 GTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEG 573
G +P + L P+ + +G+PSECLLLKNMFDP E +FD+DIKEDVE
Sbjct: 448 GVIP------ASVLPTQVMPTPVAEPVGIPSECLLLKNMFDPSTEIEPDFDIDIKEDVEE 501
Query: 574 ECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
ECSK+G++ HI+V+K SAGFVYL+FE +++ AAQRA+H RWFA ++ITA FM P YEA
Sbjct: 502 ECSKYGRVMHIYVDKRSAGFVYLQFETVEASSAAQRAMHMRWFARRLITAIFMQPHLYEA 561
Query: 634 KFPD 637
KF D
Sbjct: 562 KFKD 565
>gi|302790311|ref|XP_002976923.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
gi|302797811|ref|XP_002980666.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300151672|gb|EFJ18317.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300155401|gb|EFJ22033.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
Length = 532
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 327/640 (51%), Positives = 381/640 (59%), Gaps = 113/640 (17%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRS 60
MDFDEYEYLEK VE+ + + + + + V +DDGH+S
Sbjct: 1 MDFDEYEYLEKTVES-----------------AAAAGATAGANGEGAKAVAAAEDDGHKS 43
Query: 61 RGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGR 120
HRS R G D ERDRD + R
Sbjct: 44 E---------------------HRSSKRSRG-------------DEERDRD-----KGDR 64
Query: 121 DRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVI 180
++ R R ER+ D DR R DKEK R + D + S
Sbjct: 65 EKRSRREHRSSRYEREKDRDRGRGDDKEKSERDRDRDRDKERSRSRRDDRDKDS------ 118
Query: 181 ERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEP 240
R SRD+E ER S+DRE +D++ + K RE RD KE+ E
Sbjct: 119 -RRHSRDKEKEERASSKDRE-------KDKDFR---KSRERRDR-------KEESAPAES 160
Query: 241 EVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDV 300
E DPERDQRTVFA+QICLKADE+ VY+FFS+AGKVRDVRLIMDRNSRRSKGVGY+EFYD
Sbjct: 161 EPDPERDQRTVFAWQICLKADEKHVYDFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDA 220
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
MSVP+A+ L+ QPLLGQ VMVKPSEAEKNLV S S + A+G GPYSGGARRLYVGNL
Sbjct: 221 MSVPLALQLNNQPLLGQNVMVKPSEAEKNLVHSASGGS-AAGAFNGPYSGGARRLYVGNL 279
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEI 418
H N+TEDQLRQVFEPFG +ELVQLPLD ETG CKG+GFVQ+++LEDAR A LNG LE+
Sbjct: 280 HVNITEDQLRQVFEPFGVIELVQLPLDQETGLCKGYGFVQYSKLEDARAAQQGLNGILEL 339
Query: 419 VGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GRAIKVSAVTDQ QD+G T D DDDEGGGL+LNARSRALLMQKLDRSG
Sbjct: 340 AGRAIKVSAVTDQQTGQDIG-TTQNDLDDDEGGGLALNARSRALLMQKLDRSG------- 391
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFD 538
V + A P AP+ VPP+ G +G+AL + SV +
Sbjct: 392 -----GVGAPASLQPQAPM---------AVPPVY--------GGIGSALSMQNGSVLPEE 429
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRF 598
IG PSECLLLKNMFDP ET EFD+DIK DV+ ECSKFG +KHI V+K S G VY+RF
Sbjct: 430 PIGPPSECLLLKNMFDPATETDPEFDIDIKNDVQDECSKFGPVKHISVDKYSQGHVYVRF 489
Query: 599 ENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
A AAQ L+ RWFAGK I ATFM Q YE KFP+S
Sbjct: 490 GTAIDALAAQLNLNKRWFAGKTIRATFMNVQVYEEKFPES 529
>gi|194704666|gb|ACF86417.1| unknown [Zea mays]
gi|414871304|tpg|DAA49861.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 537
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 272/402 (67%), Positives = 316/402 (78%), Gaps = 26/402 (6%)
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
EPEVDPERDQRTVFA+Q+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY+EFY
Sbjct: 158 EPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFY 217
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
DVMSVPMAIALSGQPLLGQ VMVKPSEAEKNLVQSN++ GA+ SGGAR+LYVG
Sbjct: 218 DVMSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAA-------SGGARKLYVG 270
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLE 417
NLH N+TEDQLRQVFEPFG VELVQLP+D TG CKG+GF+QFARLEDA+ A +LNGQL+
Sbjct: 271 NLHSNITEDQLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQSLNGQLD 330
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIA 477
I GR IKVSAVTD G+Q GA TTGD DDDEGGGL+LNA SRA LM KLDRSG+AT++
Sbjct: 331 IAGRVIKVSAVTDHVGMQASGA-TTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSL- 388
Query: 478 GSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ--GTVPTHPGQLGTALQVPTASVP 535
T + + + +P ++GA A S L+PP V G+VP P L V T +V
Sbjct: 389 ----TRGIGAAGVAVPATSVIGAPGAAS-LLPPTVAAVGSVPGAP-----VLPVTTQNV- 437
Query: 536 IFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVY 595
T+ P+E LLLKNMFDP ET +FD+DI++DV+ ECSKFG +KHIFV+K++AGFVY
Sbjct: 438 ---TMSTPTEFLLLKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVY 494
Query: 596 LRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
L+F++ +A AQ ALHGRWFAGKMITATFM Y KFP+
Sbjct: 495 LQFDSVTAAAKAQNALHGRWFAGKMITATFMSALEYSTKFPN 536
>gi|242036887|ref|XP_002465838.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
gi|241919692|gb|EER92836.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
Length = 541
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 285/407 (70%), Positives = 326/407 (80%), Gaps = 25/407 (6%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K+E EPEVDPERDQRTVFA+Q+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 155 KEEVAEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 214
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYD MSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN+S +GA+ SGGAR
Sbjct: 215 YIEFYDAMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAA-------SGGAR 267
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNL 412
+LYVGNLH N+ EDQLRQVFEPFG VELVQLPLD TG CKGFGFVQF RLEDA+ A +L
Sbjct: 268 KLYVGNLHSNINEDQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFVQFVRLEDAKAAQSL 327
Query: 413 NGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
NGQLEI GR IKVSAVTDQ+G+Q GA TGD DDDEGGGL+LNA SRALLMQKLDRSG
Sbjct: 328 NGQLEIAGRVIKVSAVTDQAGVQVSGA--TGDLDDDEGGGLALNASSRALLMQKLDRSGI 385
Query: 473 ATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTA 532
T++ G T + ST + +PT +LGAA A + L+ P V G LG+ +P A
Sbjct: 386 TTSLTGGMGTAGL-STPVVIPTVSVLGAAPAAAPLLHPTVPG--------LGS---IPGA 433
Query: 533 SVPIFDT---IGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
++PI + PSECLLLKNMFDP ET +FD+DI++DV+ ECSKFG+LKHIFV+K+
Sbjct: 434 TLPITTPSIDLAPPSECLLLKNMFDPALETDPDFDLDIRDDVQEECSKFGQLKHIFVDKN 493
Query: 590 SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFP 636
+AGFVYLRF++ +A +AQ+ALHGRWFAGKMITATFM PQ YE KFP
Sbjct: 494 TAGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMTPQQYEMKFP 540
>gi|222624209|gb|EEE58341.1| hypothetical protein OsJ_09449 [Oryza sativa Japonica Group]
Length = 565
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 285/411 (69%), Positives = 324/411 (78%), Gaps = 29/411 (7%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K+E EPE DPERDQRTVFAYQ+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 175 KEEAGEPEADPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 234
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYDVMSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN+S +GA+ SGGAR
Sbjct: 235 YIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAA-------SGGAR 287
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQ--FARLEDARNAL 410
+LYVGNLH N+TEDQLRQVFEPFG VELVQLPLD TG CKGFGFVQ FARLEDA+ A
Sbjct: 288 KLYVGNLHSNITEDQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFVQASFARLEDAKAAQ 347
Query: 411 NLNGQLEIVGRAIK--VSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
+LNGQL+I GR IK VSAVTDQ+G+Q G TTGD DDDEGGGL+LNA SRALLMQKLD
Sbjct: 348 SLNGQLDIAGRVIKASVSAVTDQAGVQVSGV-TTGDLDDDEGGGLALNASSRALLMQKLD 406
Query: 469 RSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQ 528
RSG T++ +N T++ LP A +LGA PP+ +PT PG LG+
Sbjct: 407 RSGVTTSLTAGIAGTGLN-TSVGLPPASVLGA--------PPVAASVLPTVPG-LGS--- 453
Query: 529 VPTASVPIFDT---IGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIF 585
VP S+PI PSECLLLKNMFDP ET +FD+DIK+DV+ ECSKFG++KHIF
Sbjct: 454 VPGVSLPITTQAIETAPPSECLLLKNMFDPSVETDPDFDLDIKDDVQEECSKFGQVKHIF 513
Query: 586 VEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFP 636
V+K+++GFVYLRF++ +A +AQ+ALHGRWFAGKMITATFM PQ Y KFP
Sbjct: 514 VDKNTSGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMSPQQYSTKFP 564
>gi|218192112|gb|EEC74539.1| hypothetical protein OsI_10059 [Oryza sativa Indica Group]
Length = 567
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 285/411 (69%), Positives = 324/411 (78%), Gaps = 29/411 (7%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K+E EPE DPERDQRTVFAYQ+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 177 KEEAGEPEADPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 236
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYDVMSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN+S +GA+ SGGAR
Sbjct: 237 YIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAA-------SGGAR 289
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQ--FARLEDARNAL 410
+LYVGNLH N+TEDQLRQVFEPFG VELVQLPLD TG CKGFGFVQ FARLEDA+ A
Sbjct: 290 KLYVGNLHSNITEDQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFVQASFARLEDAKAAQ 349
Query: 411 NLNGQLEIVGRAIK--VSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
+LNGQL+I GR IK VSAVTDQ+G+Q G TTGD DDDEGGGL+LNA SRALLMQKLD
Sbjct: 350 SLNGQLDIAGRVIKASVSAVTDQAGVQVSGV-TTGDLDDDEGGGLALNASSRALLMQKLD 408
Query: 469 RSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQ 528
RSG T++ +N T++ LP A +LGA PP+ +PT PG LG+
Sbjct: 409 RSGVTTSLTAGIAGTGLN-TSVGLPPASVLGA--------PPVAASVLPTVPG-LGS--- 455
Query: 529 VPTASVPIFDT---IGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIF 585
VP S+PI PSECLLLKNMFDP ET +FD+DIK+DV+ ECSKFG++KHIF
Sbjct: 456 VPGVSLPITTQAIETAPPSECLLLKNMFDPSVETDPDFDLDIKDDVQEECSKFGQVKHIF 515
Query: 586 VEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFP 636
V+K+++GFVYLRF++ +A +AQ+ALHGRWFAGKMITATFM PQ Y KFP
Sbjct: 516 VDKNTSGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMSPQQYSTKFP 566
>gi|356525566|ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 550
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/408 (63%), Positives = 300/408 (73%), Gaps = 33/408 (8%)
Query: 229 RRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRR 288
RR ++KKE EPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRR
Sbjct: 171 RRFRDKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 230
Query: 289 SKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPY 348
SKGVGY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN+S G + G TGPY
Sbjct: 231 SKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNAS--GGAAGVTGPY 288
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDAR 407
R+LYVGNLHFNMTE QLR++FEPFG VE+VQLPLD ETGHCKGFGFVQF LE A+
Sbjct: 289 GAVDRKLYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFTHLEHAK 348
Query: 408 NALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL 467
A +LNG+LEI GR IKVS VTD QD A + D DDDE GGL+LNA SRALLMQ+L
Sbjct: 349 AAQSLNGKLEIAGRTIKVSCVTDHVASQDTTAK-SADLDDDE-GGLTLNAHSRALLMQRL 406
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTAL 527
+ A S P VN G+ A T+ P+ +PT
Sbjct: 407 AGADPA-----SLGLPVVN------------GSVPAQQTISLPIGAPVLPTQ-------- 441
Query: 528 QVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVE 587
+P P + +G PS+CLLLKNMFDP ET +FD+DIKEDVE ECSK+G++KHIFV+
Sbjct: 442 VMPN---PAVEPVGNPSDCLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVKHIFVD 498
Query: 588 KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
K S+GFVYLRF+ ++A AQRA+H RWFA ++I+A FM P+ YEAKF
Sbjct: 499 KKSSGFVYLRFDTVEAASGAQRAMHMRWFARRLISAVFMQPELYEAKF 546
>gi|222612890|gb|EEE51022.1| hypothetical protein OsJ_31660 [Oryza sativa Japonica Group]
Length = 548
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 279/408 (68%), Positives = 323/408 (79%), Gaps = 25/408 (6%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K + EPE DPERDQRTVFA+Q+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 162 KDDGAEPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 221
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYD MSVPMAIAL+GQ LLGQ VMVKPSEAEKNLVQSN ASGG SGGAR
Sbjct: 222 YIEFYDAMSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQSNV----ASGGIA---SGGAR 274
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNL 412
+LYVGNLH N+TEDQLRQVFEPFG VELVQLP+D TG CKGFGF+QFARLEDA+ A +L
Sbjct: 275 KLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQSL 334
Query: 413 NGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
NGQL+I GR IKVSAVT+Q+GLQ +G TTGD DDDEGGGL+LNA SRA+LM+KLDRSG+
Sbjct: 335 NGQLDIAGRVIKVSAVTEQAGLQ-VGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGT 393
Query: 473 ATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ--GTVPTHPGQLGTALQVP 530
AT+I G P VN T++ LP+A + GA ++L+ P + GTVP +Q+P
Sbjct: 394 ATSITGGIGIPGVN-TSVELPSASVTGAPLPTTSLIQPTIPAIGTVP--------GIQIP 444
Query: 531 -TASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T S IG P+E LLLKNMFDP ET +FD+DIK+DV+ ECSKFG + HIFV+K+
Sbjct: 445 GTQSA----DIGSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKN 500
Query: 590 SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
+AGFVYL F++ +A AAQRALHGRWFAGKMITATFM Q Y+ KFP+
Sbjct: 501 TAGFVYLHFDSVAAATAAQRALHGRWFAGKMITATFMTAQQYKMKFPN 548
>gi|147856399|emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
Length = 461
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 273/432 (63%), Positives = 319/432 (73%), Gaps = 29/432 (6%)
Query: 207 SRDRELKEREKERESRDNDKES--RRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERD 264
S+ RE E+++ R RD ++ES RR K+KKE VEPE DPERDQRTVFAYQ+ LKA ERD
Sbjct: 52 SKRRERHEKDRRRSGRDGERESKGRRFKDKKEAVEPEADPERDQRTVFAYQMPLKATERD 111
Query: 265 VYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 324
VYEFFS+AGKVRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSG L GQPVMVKPS
Sbjct: 112 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPS 171
Query: 325 EAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQL 384
EAEKNLVQSN+S SGG GPY R+LYVGNLHFNMTE QLRQ+FEPFG VELVQL
Sbjct: 172 EAEKNLVQSNAS-GAVSGGIAGPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQL 230
Query: 385 PLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTG 443
PLD ETG CKGFGFVQFA LE A+ A NLNG+L+I GR IKVS+VTD G+QD GA
Sbjct: 231 PLDLETGQCKGFGFVQFAELEHAKAAQNLNGKLDIAGRIIKVSSVTDHIGVQDAGAKAAD 290
Query: 444 DFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASA 503
DDD+GGGLSLNA+SRALLMQKLDR+GS + P N A+ L + +A
Sbjct: 291 F-DDDDGGGLSLNAQSRALLMQKLDRTGSLGVPMLNGSAP--NQQAISLS----INGQAA 343
Query: 504 VSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEF 563
VS P P Q+ T+ P + +G P+ECLLLKNMFDP E +F
Sbjct: 344 VSA----------PALPTQVVTS--------PASEPVGTPTECLLLKNMFDPATEIDPDF 385
Query: 564 DMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITA 623
D+DIKE+V+ ECS FG++KHI+VEK SAG+VYLRFE ++A AQRA+H RWFA ++I+A
Sbjct: 386 DLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLRFETVEAAVTAQRAMHMRWFARRLISA 445
Query: 624 TFMVPQTYEAKF 635
F+ P+ YEAKF
Sbjct: 446 IFLQPRDYEAKF 457
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVR 38
MDFDEYEYLEK VE PE K+K DG KSE R
Sbjct: 1 MDFDEYEYLEKAVEEPENRKKK-----DGGEKSERSYR 33
>gi|28059803|gb|AAO30095.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 527
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 317/638 (49%), Positives = 387/638 (60%), Gaps = 118/638 (18%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRS 60
M+FDEYEYLEK VE E A + GN +SE R R + E+ + + RS
Sbjct: 1 MEFDEYEYLEKTVE--EGAGSNKKKEESGNERSERSYRKREGVERQGEEGGEEERVSSRS 58
Query: 61 RGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGR 120
+ S+ E GG+ RD +R+RD+ RE
Sbjct: 59 KKSRGDGEENG------------------GGKRDRERERHRSSRDKDRERDKVRE----- 95
Query: 121 DRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVI 180
RD+E D+E+ S ER RSDRD + R+
Sbjct: 96 ------------------GSRDKESDRER---------SSKERDRSDRD-----KPRDRE 123
Query: 181 ERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEP 240
RER + R ++ EV+ER SRR ++KK+ EP
Sbjct: 124 RREREKRSSSRSRREEKEPEVVERG----------------------SRRHRDKKD--EP 159
Query: 241 EVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDV 300
E DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGY+EFYDV
Sbjct: 160 EADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDV 219
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
MSVPMAIALSGQ LGQPVMVKPSEAEKNL QSNS+ GGTGP R+LYVGNL
Sbjct: 220 MSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTTV----GGTGP---ADRKLYVGNL 272
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA-LNLNGQLEI 418
HFNM+E QLRQ+FE FG VELVQLPLD ETG CKGFGF+QF +LE ++ A + LNG+LEI
Sbjct: 273 HFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEI 332
Query: 419 VGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GR IKVS+V+D G QD A + DFDDD+GGGL+LNA+SRA+LMQKLDRSG AT+I G
Sbjct: 333 AGRTIKVSSVSDHIGTQD-SAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVG 391
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIF- 537
S P +N A P G P+ P + +PT ++P F
Sbjct: 392 SLGVPGLNGAAFNQP--------------------GMNPSFPTSV-----LPTTAIPSFV 426
Query: 538 -DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYL 596
+ +G+PSECLLLKNMFDP ET FD++I++DV ECSK+G + HI+V+K+SAGFVYL
Sbjct: 427 NEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPVNHIYVDKNSAGFVYL 486
Query: 597 RFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
RF++ ++A AAQRA+H RWFA KMI+ATFM P YEAK
Sbjct: 487 RFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAK 524
>gi|18416114|ref|NP_568220.1| RNA-binding protein 39 [Arabidopsis thaliana]
gi|15451046|gb|AAK96794.1| splicing factor-like protein [Arabidopsis thaliana]
gi|332004077|gb|AED91460.1| RNA-binding protein 39 [Arabidopsis thaliana]
Length = 527
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 292/527 (55%), Positives = 354/527 (67%), Gaps = 63/527 (11%)
Query: 112 RDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDER 171
R ++ R + N RDR+R D+DRE+DK RE S S ER +RD
Sbjct: 57 RSKKSRGDGEENGGGKRDRERERHRSSRDKDRERDKV--REGSRDKESDRERSSKERDRS 114
Query: 172 ERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP 231
+R + R+ RER + R ++ EV+ER SRR
Sbjct: 115 DRDKPRDRERREREKRSSSRSRREEKEPEVVERG----------------------SRRH 152
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
++KK+ EPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKG
Sbjct: 153 RDKKD--EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 210
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
VGY+EFYDVMSVPMAIALSGQ LGQPVMVKPSEAEKNL QSNS+ GGTGP
Sbjct: 211 VGYIEFYDVMSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTTV----GGTGP---A 263
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA- 409
R+LYVGNLHFNM+E QLRQ+FE FG VELVQLPLD ETG CKGFGF+QF +LE ++ A
Sbjct: 264 DRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQ 323
Query: 410 LNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
+ LNG+LEI GR IKVS+V+D G QD A + DFDDD+GGGL+LNA+SRA+LMQKLDR
Sbjct: 324 IALNGKLEIAGRTIKVSSVSDHIGTQD-SAPKSADFDDDDGGGLALNAQSRAMLMQKLDR 382
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
SG AT+I GS P +N A P G P+ P + +
Sbjct: 383 SGIATSIVGSLGVPGLNGAAFNQP--------------------GMNPSFPTSV-----L 417
Query: 530 PTASVPIF--DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVE 587
PT ++P F + +G+PSECLLLKNMFDP ET FD++I++DV ECSK+G + HI+V+
Sbjct: 418 PTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPVNHIYVD 477
Query: 588 KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
K+SAGFVYLRF++ ++A AAQRA+H RWFA KMI+ATFM P YEAK
Sbjct: 478 KNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAK 524
>gi|217074842|gb|ACJ85781.1| unknown [Medicago truncatula]
Length = 346
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/357 (70%), Positives = 283/357 (79%), Gaps = 12/357 (3%)
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
MDRNSRRSKGVGY+EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS +S+
Sbjct: 1 MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTASVVNGP 60
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFA 401
G GPYSGGARRLYVGNLH ++TE LR+VFE FG VELVQ+PLD+ GHCKGFGFVQFA
Sbjct: 61 SGNLGPYSGGARRLYVGNLHSSITEADLRRVFEAFGQVELVQMPLDDIGHCKGFGFVQFA 120
Query: 402 RLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRA 461
RLEDA+NA +LN QLEI GR IKVSAVTDQSG+Q+ G NT DDDEGGGLSLNA SRA
Sbjct: 121 RLEDAKNAQSLNSQLEIGGRTIKVSAVTDQSGMQEFGGNTGDI-DDDEGGGLSLNASSRA 179
Query: 462 LLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPG 521
LLMQKLDRSG A+++ G VN+T L L +G+ AV+ + P V G
Sbjct: 180 LLMQKLDRSGIASSMVGLLGNSVVNNTGLNLQA---MGSIPAVALIPAPGV--------G 228
Query: 522 QLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKL 581
G LQ+P + P DTIG PSECLLLKNMFDP++E +FD+D+KEDVE ECSKFG L
Sbjct: 229 MPGGGLQIPMLTSPTIDTIGTPSECLLLKNMFDPEDEKEPDFDLDVKEDVEAECSKFGNL 288
Query: 582 KHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
KHI+V+K SAGFVYLRFENTQ A +AQRALHGRWFAGKMITA+FMVPQ YE +FPDS
Sbjct: 289 KHIYVDKRSAGFVYLRFENTQPAISAQRALHGRWFAGKMITASFMVPQLYEDRFPDS 345
>gi|356512787|ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 554
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/411 (62%), Positives = 296/411 (72%), Gaps = 33/411 (8%)
Query: 226 KESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN 285
++ RR + KKE EPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRN
Sbjct: 172 RDGRRFRVKKEASEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 231
Query: 286 SRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT 345
SRRSKGVGY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN+S A G
Sbjct: 232 SRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVAGP 291
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLE 404
R+LYVGNLHFNMTE QLR++FEPFG VE+VQLPLD ETGHCKGFGFVQF LE
Sbjct: 292 YGAVD--RKLYVGNLHFNMTESQLREIFEPFGPVEVVQLPLDLETGHCKGFGFVQFTHLE 349
Query: 405 DARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLM 464
A+ A +LNG+LEI GR IKVS VTD QD A + D DDDE GGL+LNA SRALLM
Sbjct: 350 HAKAAQSLNGKLEIAGRTIKVSCVTDHVASQDATAK-SADLDDDE-GGLTLNAHSRALLM 407
Query: 465 QKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLG 524
Q+L A S P VN G+ A + P+ +PT
Sbjct: 408 QRL-----AGADPASIGLPVVN------------GSVPAQQAISLPIGAPVLPT------ 444
Query: 525 TALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHI 584
L +P P+ + +G PSECLLLKNMFDP ET +FD+DIKEDVE ECSK+G++KHI
Sbjct: 445 --LVMPN---PVVEPVGNPSECLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVKHI 499
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
FV+K SAGFVYLRF+ ++A AAQ A+H RWFA ++I+A FM P+ YEAKF
Sbjct: 500 FVDKKSAGFVYLRFDTVEAASAAQHAMHLRWFARRLISAVFMQPELYEAKF 550
>gi|227206234|dbj|BAH57172.1| AT5G09880 [Arabidopsis thaliana]
Length = 505
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/411 (63%), Positives = 309/411 (75%), Gaps = 39/411 (9%)
Query: 228 SRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSR 287
SRR ++KK+ EPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSR
Sbjct: 127 SRRHRDKKD--EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSR 184
Query: 288 RSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGP 347
RSKGVGY+EFYDVMSVPMAIALSGQ LGQPVMVKPSEAEKNL QSNS+ GGTGP
Sbjct: 185 RSKGVGYIEFYDVMSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTTV----GGTGP 240
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDA 406
R+LYVGNLHFNM+E QLRQ+FE FG VELVQLPLD ETG CKGFGF+QF +LE +
Sbjct: 241 ---ADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHS 297
Query: 407 RNA-LNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQ 465
+ A + LNG+LEI GR IKVS+V+D G QD A + DFDDD+GGGL+LNA+SRA+LMQ
Sbjct: 298 KAAQIALNGKLEIAGRTIKVSSVSDHIGTQD-SAPKSADFDDDDGGGLALNAQSRAMLMQ 356
Query: 466 KLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGT 525
KLDRSG AT+I GS P +N A P G P+ P +
Sbjct: 357 KLDRSGIATSIVGSLGVPGLNGAAFNQP--------------------GMNPSFPTSV-- 394
Query: 526 ALQVPTASVPIF--DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKH 583
+PT ++P F + +G+PSECLLLKNMFDP ET FD++I++DV ECSK+G + H
Sbjct: 395 ---LPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPVNH 451
Query: 584 IFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
I+V+K+SAGFVYLRF++ ++A AAQRA+H RWFA KMI+ATFM P YEAK
Sbjct: 452 IYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAK 502
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/412 (62%), Positives = 301/412 (73%), Gaps = 26/412 (6%)
Query: 225 DKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
+++ RR ++KK+ VEPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDR
Sbjct: 2 NRDGRRFRDKKDNVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDR 61
Query: 285 NSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG 344
NSRRSKGVGY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN++ A G
Sbjct: 62 NSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAA--GV 119
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
TGPY R+LYVGNLHFNMTE LR++FEPFG +E+VQLPLD ETGHCKGFGFVQFA L
Sbjct: 120 TGPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHL 179
Query: 404 EDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALL 463
E A+ + ++ K S+VTD G QD A + DFDDDE GGL+LNA SRALL
Sbjct: 180 EHAKASSEFKWKIGDCWPNNKGSSVTDHVGSQDTTAK-SADFDDDE-GGLTLNAHSRALL 237
Query: 464 MQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQL 523
MQ+L + T+I P VN P+P A S L G P Q+
Sbjct: 238 MQRLAGADIPTSIG----VPMVNG---PVPV------QQAFS-----LPIGNPGVIPAQV 279
Query: 524 GTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKH 583
A +PT P+ + +GVPSECLLLKNMFDP ET +FD+DIKEDVE ECSK+G++KH
Sbjct: 280 LPAQVMPT---PVVEPVGVPSECLLLKNMFDPSTETEPDFDLDIKEDVEEECSKYGRVKH 336
Query: 584 IFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
I+V+K SAGFVYLRFE +++ AAQRA+H RWFA ++ITA FM P YEAKF
Sbjct: 337 IYVDKRSAGFVYLRFETVEASSAAQRAMHMRWFARRLITAIFMQPHLYEAKF 388
>gi|9758966|dbj|BAB09409.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 604
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 289/522 (55%), Positives = 351/522 (67%), Gaps = 63/522 (12%)
Query: 112 RDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDER 171
R ++ R + N RDR+R D+DRE+DK RE S S ER +RD
Sbjct: 57 RSKKSRGDGEENGGGKRDRERERHRSSRDKDRERDKV--REGSRDKESDRERSSKERDRS 114
Query: 172 ERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP 231
+R + R+ RER + R ++ EV+ER SRR
Sbjct: 115 DRDKPRDRERREREKRSSSRSRREEKEPEVVERG----------------------SRRH 152
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
++KK+ EPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKG
Sbjct: 153 RDKKD--EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 210
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
VGY+EFYDVMSVPMAIALSGQ LGQPVMVKPSEAEKNL QSNS+ GGTGP
Sbjct: 211 VGYIEFYDVMSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTTV----GGTGP---A 263
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA- 409
R+LYVGNLHFNM+E QLRQ+FE FG VELVQLPLD ETG CKGFGF+QF +LE ++ A
Sbjct: 264 DRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQ 323
Query: 410 LNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
+ LNG+LEI GR IKVS+V+D G QD A + DFDDD+GGGL+LNA+SRA+LMQKLDR
Sbjct: 324 IALNGKLEIAGRTIKVSSVSDHIGTQD-SAPKSADFDDDDGGGLALNAQSRAMLMQKLDR 382
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
SG AT+I GS P +N A P G P+ P + +
Sbjct: 383 SGIATSIVGSLGVPGLNGAAFNQP--------------------GMNPSFPTSV-----L 417
Query: 530 PTASVPIF--DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVE 587
PT ++P F + +G+PSECLLLKNMFDP ET FD++I++DV ECSK+G + HI+V+
Sbjct: 418 PTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPVNHIYVD 477
Query: 588 KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQ 629
K+SAGFVYLRF++ ++A AAQRA+H RWFA KMI+ATFMV Q
Sbjct: 478 KNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMVKQ 519
>gi|125532099|gb|EAY78664.1| hypothetical protein OsI_33765 [Oryza sativa Indica Group]
Length = 549
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 266/401 (66%), Positives = 307/401 (76%), Gaps = 36/401 (8%)
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
EPE DPERDQRTVFA+Q+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY+EFY
Sbjct: 183 EPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFY 242
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
D MSVPMAIAL+GQ LLGQ VMVKPSEAEKNLVQSN ASGG SGGAR+LYVG
Sbjct: 243 DAMSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQSNV----ASGGIA---SGGARKLYVG 295
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
NLH N+TEDQLRQVFEPFG VELVQLP FARLEDA+ A +LNGQL+I
Sbjct: 296 NLHSNITEDQLRQVFEPFGQVELVQLP--------------FARLEDAKAAQSLNGQLDI 341
Query: 419 VGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GR IKVSAVT+Q+GLQ +G TTGD DDDEGGGL+LNA SRA+LM+KLDRSG+AT+I G
Sbjct: 342 AGRVIKVSAVTEQAGLQ-VGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGTATSITG 400
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ--GTVPTHPGQLGTALQVPTASVPI 536
P VN T++ LP+A + GA ++L+ P + GTVP +Q+P
Sbjct: 401 GIGIPGVN-TSVELPSASVTGAPLPTTSLIQPTIPAIGTVP--------GIQIPGTQSA- 450
Query: 537 FDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYL 596
IG P+E LLLKNMFDP ET +FD+DIK+DV+ ECSKFG + HIFV+K++AGFVYL
Sbjct: 451 --DIGSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVYL 508
Query: 597 RFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
F++ +A AAQRALHGRWFAGKMITATFM Q Y+ KFP+
Sbjct: 509 HFDSVAAATAAQRALHGRWFAGKMITATFMTAQQYKMKFPN 549
>gi|224094981|ref|XP_002310314.1| predicted protein [Populus trichocarpa]
gi|222853217|gb|EEE90764.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 262/416 (62%), Positives = 312/416 (75%), Gaps = 35/416 (8%)
Query: 229 RRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRR 288
RR KEKKE VEPE DPERDQRTVF YQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRR
Sbjct: 1 RRFKEKKEVVEPEADPERDQRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 60
Query: 289 SKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPY 348
SKGVGYVEFYD MSVPMAI LSGQ LLGQPVMVKPSEAEKNLVQ ++S G +GG TGP+
Sbjct: 61 SKGVGYVEFYDAMSVPMAITLSGQLLLGQPVMVKPSEAEKNLVQPSAS-GGGTGGVTGPF 119
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDAR 407
R+LYVGNLHFNMTE QLRQ+FEPFG VELVQLPLD ETG CKGFGFVQF +LE+A+
Sbjct: 120 GAVDRKLYVGNLHFNMTEMQLRQLFEPFGIVELVQLPLDLETGQCKGFGFVQFTQLENAK 179
Query: 408 NALN-LNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQK 466
A + LNG+LEI GR IKVS+VT+ G QD G + DDD+GGGL+LNA+SRALLMQK
Sbjct: 180 AAQSALNGKLEIAGRTIKVSSVTEHGGQQDSGVKSADF-DDDDGGGLALNAQSRALLMQK 238
Query: 467 LDRSGSATTIAGSAVTPAVNSTA-------LPLPTAPLLGAASAVSTLVPPLVQGTVPTH 519
LDR+G+AT+IAGS P +N +A LP+ +GAA+ + ++P
Sbjct: 239 LDRTGTATSIAGSLGVPLLNGSAPNQQAISLPVNGQTNIGAAAFPALVLPS--------- 289
Query: 520 PGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFG 579
P +++IG PSECLLLKNMFDP ET +FD+DIKEDVE ECS++G
Sbjct: 290 ---------------PAYESIGQPSECLLLKNMFDPATETEPDFDLDIKEDVEEECSRYG 334
Query: 580 KLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++KHI+V+K+SAG VYL+F++ ++A AQRA+H RWFA + I A FMV A+F
Sbjct: 335 QVKHIWVDKNSAGHVYLQFDSMEAAARAQRAMHMRWFARRSILAIFMVIIFNYARF 390
>gi|168061001|ref|XP_001782480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666033|gb|EDQ52699.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 363
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/376 (65%), Positives = 280/376 (74%), Gaps = 33/376 (8%)
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
MDRNSRRSKGVGY+EFYD MSVPMAIALSGQ LL QPVMVKPSEAEKNLVQS +++ G +
Sbjct: 1 MDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLNQPVMVKPSEAEKNLVQSTTAVPGVT 60
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
GG GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFG VELVQLP D ETG KG+GFVQ+
Sbjct: 61 GGFIGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQY 120
Query: 401 ARLEDARNA-LNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARS 459
ARLEDAR A NLNG LE+ GR IKVSAV+DQ G++D+G + G+ DDDEGGGLSLNARS
Sbjct: 121 ARLEDARAAQQNLNG-LELAGRPIKVSAVSDQIGMEDMGVH-PGELDDDEGGGLSLNARS 178
Query: 460 RALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAA--SAVSTLV-PP-LVQGT 515
RALLMQKLDRSGS T+ G+ + A P+P LLG A + V+ LV PP VQ
Sbjct: 179 RALLMQKLDRSGSGTSNTGATL------PAAPVPALGLLGTAVPTGVTPLVRPPFFVQNP 232
Query: 516 V-------------PTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEE 562
+ PG L +P V D IG PSE LLLKNMFDP E+ E
Sbjct: 233 LVLAGAATGLGAAALGTPG-----LVMPPV-VGAVDAIGQPSEYLLLKNMFDPSTESDPE 286
Query: 563 FDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 622
FD+DIKEDV+ ECSKFG +KHIFV+K+SAG VYL FE+T +A AAQRALHGRWFAGKMIT
Sbjct: 287 FDLDIKEDVQDECSKFGAVKHIFVDKNSAGHVYLCFESTPAAMAAQRALHGRWFAGKMIT 346
Query: 623 ATFMVPQTYEAKFPDS 638
AT+M Y+ KFPD
Sbjct: 347 ATYMSALAYQTKFPDC 362
>gi|224103159|ref|XP_002312948.1| predicted protein [Populus trichocarpa]
gi|222849356|gb|EEE86903.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/383 (64%), Positives = 273/383 (71%), Gaps = 66/383 (17%)
Query: 256 ICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLL 315
+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQPLL
Sbjct: 3 LGLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLL 62
Query: 316 GQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEP 375
GQPVMVKPSEAEKNLVQS +++A SGG GPY+GGARRLY+GNLHFN+TEDQLRQVFEP
Sbjct: 63 GQPVMVKPSEAEKNLVQSTTAVA--SGGLIGPYTGGARRLYIGNLHFNITEDQLRQVFEP 120
Query: 376 FGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQ 435
FG VELVQLP DE GHCKGFGFVQFARLEDARNALNLNGQ+EI GR IKVSAVTDQ+G Q
Sbjct: 121 FGAVELVQLPHDEGGHCKGFGFVQFARLEDARNALNLNGQVEIAGRPIKVSAVTDQAGAQ 180
Query: 436 DLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTA 495
D G N DDDEGGGL+LNARSRALLMQKLDR+G+A++I GS TP LPTA
Sbjct: 181 DGGTNVGDF-DDDEGGGLALNARSRALLMQKLDRTGTASSITGSLGTPT-------LPTA 232
Query: 496 PLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDP 555
P+LGAA AVS + PL+ G+V PG LQ+P + F
Sbjct: 233 PILGAAPAVSPAIAPLLSGSVLAIPGLPVAGLQLPATNSAGF------------------ 274
Query: 556 KNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRW 615
Y F E+++G + AQRALHGRW
Sbjct: 275 ---VYMRF-----ENMQGAVN------------------------------AQRALHGRW 296
Query: 616 FAGKMITATFMVPQTYEAKFPDS 638
FAGKMITATFMVPQTYEAKFPDS
Sbjct: 297 FAGKMITATFMVPQTYEAKFPDS 319
>gi|224081877|ref|XP_002306512.1| predicted protein [Populus trichocarpa]
gi|222855961|gb|EEE93508.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/380 (63%), Positives = 285/380 (75%), Gaps = 21/380 (5%)
Query: 258 LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQ 317
LK ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYVEFYD MSVPMAIALSGQ L GQ
Sbjct: 3 LKVTERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLFGQ 62
Query: 318 PVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFG 377
PVMVKPSEAEKNLVQS++S + G GP+ R+LYVGNLHFNMTE QLRQ+FEPFG
Sbjct: 63 PVMVKPSEAEKNLVQSSASSG-GTSGVAGPFGPVDRKLYVGNLHFNMTEMQLRQLFEPFG 121
Query: 378 TVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKVSAVTDQSGLQ 435
TVELVQLPLD ETG CKGFGFVQF +LE+A+ A + LNG+LEI GR IKVS+VT+ G Q
Sbjct: 122 TVELVQLPLDLETGQCKGFGFVQFTQLENAKAAQSALNGKLEIAGRTIKVSSVTEHGGQQ 181
Query: 436 DLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTA 495
D GA + DDD+GGGL+LNA+SRALLMQKLDR+G AT+IAGS P +N
Sbjct: 182 DTGAKSADF-DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVPLLN--------- 231
Query: 496 PLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDP 555
G+AS + P++ T AL P S P ++ IG PSECL+LKNMFDP
Sbjct: 232 ---GSASNQQAISLPIIGQTAIG-----AAALPAPVLSSPAYEPIGQPSECLMLKNMFDP 283
Query: 556 KNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRW 615
ET +FD+DIKEDVE ECSK+G+++HIFV+K+S G VYLRF + ++A AQRA+H RW
Sbjct: 284 ATETEPDFDLDIKEDVEEECSKYGQVEHIFVDKNSTGCVYLRFGSIEAAAGAQRAMHMRW 343
Query: 616 FAGKMITATFMVPQTYEAKF 635
FA ++I A FM + YEA+F
Sbjct: 344 FARRLILAVFMPTREYEARF 363
>gi|414871305|tpg|DAA49862.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 487
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/353 (68%), Positives = 278/353 (78%), Gaps = 26/353 (7%)
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
EPEVDPERDQRTVFA+Q+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY+EFY
Sbjct: 158 EPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFY 217
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
DVMSVPMAIALSGQPLLGQ VMVKPSEAEKNLVQSN++ GA+ SGGAR+LYVG
Sbjct: 218 DVMSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAA-------SGGARKLYVG 270
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLE 417
NLH N+TEDQLRQVFEPFG VELVQLP+D TG CKG+GF+QFARLEDA+ A +LNGQL+
Sbjct: 271 NLHSNITEDQLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQSLNGQLD 330
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIA 477
I GR IKVSAVTD G+Q GA TTGD DDDEGGGL+LNA SRA LM KLDRSG+AT++
Sbjct: 331 IAGRVIKVSAVTDHVGMQASGA-TTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSL- 388
Query: 478 GSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ--GTVPTHPGQLGTALQVPTASVP 535
T + + + +P ++GA A S L+PP V G+VP P L V T +V
Sbjct: 389 ----TRGIGAAGVAVPATSVIGAPGAAS-LLPPTVAAVGSVPGAP-----VLPVTTQNV- 437
Query: 536 IFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
T+ P+E LLLKNMFDP ET +FD+DI++DV+ ECSKFG +KHIFV+K
Sbjct: 438 ---TMSTPTEFLLLKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDK 487
>gi|108706237|gb|ABF94032.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 566
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 260/440 (59%), Positives = 299/440 (67%), Gaps = 86/440 (19%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K+E EPE DPERDQRTVFAYQ+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 175 KEEAGEPEADPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 234
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYDVMSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN+S +GA+ SGGAR
Sbjct: 235 YIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAA-------SGGAR 287
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLN 413
+LYVGNLH N+TEDQLR QFARLEDA+ A +LN
Sbjct: 288 KLYVGNLHSNITEDQLR----------------------------QFARLEDAKAAQSLN 319
Query: 414 GQLEIVGRAIK----------------------------------VSAVTDQSGLQDLGA 439
GQL+I GR IK VSAVTDQ+G+Q G
Sbjct: 320 GQLDIAGRVIKASVFFRFTRIHVVFKLYISNIRVLPDTMLNCCNQVSAVTDQAGVQVSGV 379
Query: 440 NTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLG 499
TTGD DDDEGGGL+LNA SRALLMQKLDRSG T++ +N T++ LP A +LG
Sbjct: 380 -TTGDLDDDEGGGLALNASSRALLMQKLDRSGVTTSLTAGIAGTGLN-TSVGLPPASVLG 437
Query: 500 AASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDT---IGVPSECLLLKNMFDPK 556
A PP+ +PT PG LG+ VP S+PI PSECLLLKNMFDP
Sbjct: 438 A--------PPVAASVLPTVPG-LGS---VPGVSLPITTQAIETAPPSECLLLKNMFDPS 485
Query: 557 NETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWF 616
ET +FD+DIK+DV+ ECSKFG++KHIFV+K+++GFVYLRF++ +A +AQ+ALHGRWF
Sbjct: 486 VETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSGFVYLRFDSITAAMSAQKALHGRWF 545
Query: 617 AGKMITATFMVPQTYEAKFP 636
AGKMITATFM PQ Y KFP
Sbjct: 546 AGKMITATFMSPQQYSTKFP 565
>gi|168048203|ref|XP_001776557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672148|gb|EDQ58690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 237/372 (63%), Positives = 274/372 (73%), Gaps = 29/372 (7%)
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
MDRNSRRSKGVGY+EFYD MSVPMAIALSGQ LL QPVMVKPSEAEKNLVQS + + G +
Sbjct: 1 MDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLNQPVMVKPSEAEKNLVQSTTVVPGVA 60
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
G GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFG VELVQLP D ETG KG+GFVQ+
Sbjct: 61 GSFIGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQY 120
Query: 401 ARLEDARNA-LNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARS 459
ARLEDAR A NLNG LE+ GR IKVSAV+DQ G++D+G + G+ DDDEGGGLSLNARS
Sbjct: 121 ARLEDARAAQQNLNG-LELAGRPIKVSAVSDQIGMEDMGVH-PGELDDDEGGGLSLNARS 178
Query: 460 RALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPL------VQ 513
RALLMQKLDRSG+ T++A + A P PT LLG +AV V PL VQ
Sbjct: 179 RALLMQKLDRSGTGTSVASTL-------PAAPAPTLGLLG--TAVPPTVTPLARPPFFVQ 229
Query: 514 GTV---------PTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFD 564
+ AL +P+ + + D IG PSE LLLKNMFDP E+ +FD
Sbjct: 230 NPLVLAGAAPGLGAAAALSSPALAMPSLTGAV-DAIGQPSEYLLLKNMFDPSTESDPDFD 288
Query: 565 MDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITAT 624
MDIK+DV+ ECSKFG +KHIFV+K+SAG VYL F++ +A AAQRALHGRWFAGKMITAT
Sbjct: 289 MDIKDDVQEECSKFGVVKHIFVDKNSAGHVYLCFDSIAAAMAAQRALHGRWFAGKMITAT 348
Query: 625 FMVPQTYEAKFP 636
++ P + + P
Sbjct: 349 YLKPCKHIVQIP 360
>gi|78708720|gb|ABB47695.1| splicing factor, CC1-like family protein, expressed [Oryza sativa
Japonica Group]
gi|215765085|dbj|BAG86782.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 339
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 280/360 (77%), Gaps = 25/360 (6%)
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
MDRNSRRSKGVGY+EFYD MSVPMAIAL+GQ LLGQ VMVKPSEAEKNLVQSN AS
Sbjct: 1 MDRNSRRSKGVGYIEFYDAMSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQSNV----AS 56
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQF 400
GG SGGAR+LYVGNLH N+TEDQLRQVFEPFG VELVQLP+D TG CKGFGF+QF
Sbjct: 57 GGIA---SGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQF 113
Query: 401 ARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSR 460
ARLEDA+ A +LNGQL+I GR IKVSAVT+Q+GLQ +G TTGD DDDEGGGL+LNA SR
Sbjct: 114 ARLEDAKAAQSLNGQLDIAGRVIKVSAVTEQAGLQ-VGGATTGDLDDDEGGGLALNASSR 172
Query: 461 ALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ--GTVPT 518
A+LM+KLDRSG+AT+I G P VN T++ LP+A + GA ++L+ P + GTVP
Sbjct: 173 AMLMRKLDRSGTATSITGGIGIPGVN-TSVELPSASVTGAPLPTTSLIQPTIPAIGTVP- 230
Query: 519 HPGQLGTALQVP-TASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSK 577
+Q+P T S IG P+E LLLKNMFDP ET +FD+DIK+DV+ ECSK
Sbjct: 231 -------GIQIPGTQSA----DIGSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSK 279
Query: 578 FGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
FG + HIFV+K++AGFVYL F++ +A AAQRALHGRWFAGKMITATFM Q Y+ KFP+
Sbjct: 280 FGAVNHIFVDKNTAGFVYLHFDSVAAATAAQRALHGRWFAGKMITATFMTAQQYKMKFPN 339
>gi|357464471|ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
gi|355491565|gb|AES72768.1| Splicing factor-like protein [Medicago truncatula]
Length = 731
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/348 (60%), Positives = 251/348 (72%), Gaps = 30/348 (8%)
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN++ A G GPY R
Sbjct: 404 YIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAA--GVVGPYGAVDR 461
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNL 412
+LYVGNLHFNMTE QLR++FEPFGTVE+VQLPLD ETGHCKGFGF+QFA +E A+ A +L
Sbjct: 462 KLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQSL 521
Query: 413 NGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
NG+LEI GR IKVS+V D G QD + DFDDDEGG L+LNA+SRALLMQKLDRSG
Sbjct: 522 NGKLEIAGRTIKVSSVADHIGSQD-TTTKSADFDDDEGG-LALNAQSRALLMQKLDRSGI 579
Query: 473 ATTIA--GSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQL-GTALQV 529
+I + + PA + +LP+ L+ HPG + L +
Sbjct: 580 TASIGLPMNGLAPAQPAISLPIGNTGLI--------------------HPGLIPAPGLAL 619
Query: 530 PTASVP--IFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVE 587
PT +P + + +G PS CLLLKNMFDP ET +FD+DIKEDVE ECSK+G++KHI+V+
Sbjct: 620 PTQIMPTQVAEPVGTPSNCLLLKNMFDPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVD 679
Query: 588 KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
K+SAGFVYL FE ++A AAQRA+H RWFA KMI+A +M P YEAKF
Sbjct: 680 KNSAGFVYLMFETVEAASAAQRAMHMRWFARKMISAIYMQPHEYEAKF 727
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 63/68 (92%)
Query: 226 KESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN 285
++SRR +EKKE VEPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRN
Sbjct: 192 RDSRRFREKKETVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 251
Query: 286 SRRSKGVG 293
SRRSKGVG
Sbjct: 252 SRRSKGVG 259
>gi|357113992|ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 551
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 247/445 (55%), Positives = 285/445 (64%), Gaps = 101/445 (22%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K++ EPE DPERDQRTVFA+Q+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 165 KEDGAEPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 224
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYDVMSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS+++ + A+ SGGAR
Sbjct: 225 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSSATSSVAA-------SGGAR 277
Query: 354 RLYVGNLH---------------------------------------FNMTEDQLRQVFE 374
+LYVGNLH F
Sbjct: 278 KLYVGNLHANITEDQLRQVFEPFGLVELVQLPVDPLTGLCKGFGFVQF------------ 325
Query: 375 PFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGL 434
ARLEDA+ A +LNGQL+I GR IKVSAVTDQ+G+
Sbjct: 326 --------------------------ARLEDAKAAQSLNGQLDIAGRVIKVSAVTDQAGV 359
Query: 435 QDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPT 494
Q GA TTGD DDDEGGGL+LNA SRALLMQKLDRSG T++ +N T++ LP
Sbjct: 360 QVSGA-TTGDLDDDEGGGLALNASSRALLMQKLDRSGVTTSLTSGMGAAGLN-TSVTLPA 417
Query: 495 APLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFD---TIGVPSECLLLKN 551
+LGA A L P L G L +P ASVP+ PSECLLLKN
Sbjct: 418 VSVLGAPPAAPALQPTLT-----------GLGL-IPGASVPVISQPIATAPPSECLLLKN 465
Query: 552 MFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRAL 611
MFDP ET +FD+DIK+DV ECSKFG+++HIFV+K++AGFVYLRF++ +A AQ+AL
Sbjct: 466 MFDPAVETDPDFDLDIKDDVREECSKFGQIRHIFVDKNTAGFVYLRFDSITAAMGAQKAL 525
Query: 612 HGRWFAGKMITATFMVPQTYEAKFP 636
GRWFAGKMITATFM PQ YEAKFP
Sbjct: 526 QGRWFAGKMITATFMSPQQYEAKFP 550
>gi|357464473|ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
gi|355491566|gb|AES72769.1| Splicing factor-like protein [Medicago truncatula]
Length = 766
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/382 (54%), Positives = 251/382 (65%), Gaps = 63/382 (16%)
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN++ A G GPY R
Sbjct: 404 YIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAA--GVVGPYGAVDR 461
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNL 412
+LYVGNLHFNMTE QLR++FEPFGTVE+VQLPLD ETGHCKGFGF+QFA +E A+ A +L
Sbjct: 462 KLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQSL 521
Query: 413 NGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGG-----------GLS------- 454
NG+LEI GR IKVS+V D G QD + DFDDDEGG LS
Sbjct: 522 NGKLEIAGRTIKVSSVADHIGSQD-TTTKSADFDDDEGGLSETSIFAPTISLSQFFPSYE 580
Query: 455 ----------------LNARSRALLMQKLDRSGSATTIA--GSAVTPAVNSTALPLPTAP 496
LNA+SRALLMQKLDRSG +I + + PA + +LP+
Sbjct: 581 FLAHLLCLFVTFMQQALNAQSRALLMQKLDRSGITASIGLPMNGLAPAQPAISLPIGNTG 640
Query: 497 LLGAASAVSTLVPPLVQGTVPTHPGQL-GTALQVPTASVP--IFDTIGVPSECLLLKNMF 553
L+ HPG + L +PT +P + + +G PS CLLLKNMF
Sbjct: 641 LI--------------------HPGLIPAPGLALPTQIMPTQVAEPVGTPSNCLLLKNMF 680
Query: 554 DPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHG 613
DP ET +FD+DIKEDVE ECSK+G++KHI+V+K+SAGFVYL FE ++A AAQRA+H
Sbjct: 681 DPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNSAGFVYLMFETVEAASAAQRAMHM 740
Query: 614 RWFAGKMITATFMVPQTYEAKF 635
RWFA KMI+A +M P YEAKF
Sbjct: 741 RWFARKMISAIYMQPHEYEAKF 762
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 63/68 (92%)
Query: 226 KESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN 285
++SRR +EKKE VEPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRN
Sbjct: 192 RDSRRFREKKETVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 251
Query: 286 SRRSKGVG 293
SRRSKGVG
Sbjct: 252 SRRSKGVG 259
>gi|293336330|ref|NP_001169267.1| uncharacterized protein LOC100383130 [Zea mays]
gi|223975957|gb|ACN32166.1| unknown [Zea mays]
gi|413934151|gb|AFW68702.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 318
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/339 (63%), Positives = 255/339 (75%), Gaps = 24/339 (7%)
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
MSVPMAIALSGQPLLGQ VMVKPSEAEKNLVQSN++ GA+ SGGAR+LYVGNL
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAA-------SGGARKLYVGNL 53
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
H N+TEDQLRQVFEPFG VELVQLPLD TG CKG+GF+QFARLEDA+ A +LNGQL+I
Sbjct: 54 HSNITEDQLRQVFEPFGQVELVQLPLDAMTGLCKGYGFIQFARLEDAKAAQSLNGQLDIA 113
Query: 420 GRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGS 479
GR IKVSAVTD G+Q GA TTGD DDDEGGGL+LNA SRA LM KLDRSG+AT++ G
Sbjct: 114 GRVIKVSAVTDHVGVQASGA-TTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTG- 171
Query: 480 AVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGTALQVPTASVPIFD 538
+ + + +P ++GAA A S L P + G+VP P L + TA I
Sbjct: 172 ----GIGAAGVAVPATSVIGAAGAASLLSPTVSAVGSVPGAP-----VLPI-TAQNVIMS 221
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRF 598
T P+E LLLKNMFDP ET +FD+DI++DV+ ECSKFG +KHIFV+K++AGFVYL+F
Sbjct: 222 T---PTEFLLLKNMFDPSLETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQF 278
Query: 599 ENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
++ +A AQ+ALHGRWFAGKMITATFM Q Y KFP+
Sbjct: 279 DSVTAAGKAQQALHGRWFAGKMITATFMSDQEYSTKFPN 317
>gi|226509668|ref|NP_001142242.1| uncharacterized protein LOC100274411 [Zea mays]
gi|194690874|gb|ACF79521.1| unknown [Zea mays]
gi|194707772|gb|ACF87970.1| unknown [Zea mays]
gi|414871307|tpg|DAA49864.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
gi|414871308|tpg|DAA49865.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 318
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/340 (62%), Positives = 255/340 (75%), Gaps = 26/340 (7%)
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
MSVPMAIALSGQPLLGQ VMVKPSEAEKNLVQSN++ GA+ SGGAR+LYVGNL
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAA-------SGGARKLYVGNL 53
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
H N+TEDQLRQVFEPFG VELVQLP+D TG CKG+GF+QFARLEDA+ A +LNGQL+I
Sbjct: 54 HSNITEDQLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQSLNGQLDIA 113
Query: 420 GRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGS 479
GR IKVSAVTD G+Q GA TTGD DDDEGGGL+LNA SRA LM KLDRSG+AT++
Sbjct: 114 GRVIKVSAVTDHVGMQASGA-TTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSL--- 169
Query: 480 AVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ--GTVPTHPGQLGTALQVPTASVPIF 537
T + + + +P ++GA A S L+PP V G+VP P L V T +V
Sbjct: 170 --TRGIGAAGVAVPATSVIGAPGAAS-LLPPTVAAVGSVPGAP-----VLPVTTQNV--- 218
Query: 538 DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLR 597
T+ P+E LLLKNMFDP ET +FD+DI++DV+ ECSKFG +KHIFV+K++AGFVYL+
Sbjct: 219 -TMSTPTEFLLLKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQ 277
Query: 598 FENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
F++ +A AQ ALHGRWFAGKMITATFM Y KFP+
Sbjct: 278 FDSVTAAAKAQNALHGRWFAGKMITATFMSALEYSTKFPN 317
>gi|78708721|gb|ABB47696.1| splicing factor, CC1-like family protein, expressed [Oryza sativa
Japonica Group]
gi|215695222|dbj|BAG90413.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 320
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/341 (65%), Positives = 262/341 (76%), Gaps = 25/341 (7%)
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
MSVPMAIAL+GQ LLGQ VMVKPSEAEKNLVQSN ASGG SGGAR+LYVGNL
Sbjct: 1 MSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQSNV----ASGGIA---SGGARKLYVGNL 53
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
H N+TEDQLRQVFEPFG VELVQLP+D TG CKGFGF+QFARLEDA+ A +LNGQL+I
Sbjct: 54 HSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQSLNGQLDIA 113
Query: 420 GRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGS 479
GR IKVSAVT+Q+GLQ +G TTGD DDDEGGGL+LNA SRA+LM+KLDRSG+AT+I G
Sbjct: 114 GRVIKVSAVTEQAGLQ-VGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGTATSITGG 172
Query: 480 AVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ--GTVPTHPGQLGTALQVP-TASVPI 536
P VN T++ LP+A + GA ++L+ P + GTVP +Q+P T S
Sbjct: 173 IGIPGVN-TSVELPSASVTGAPLPTTSLIQPTIPAIGTVP--------GIQIPGTQSA-- 221
Query: 537 FDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYL 596
IG P+E LLLKNMFDP ET +FD+DIK+DV+ ECSKFG + HIFV+K++AGFVYL
Sbjct: 222 --DIGSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVYL 279
Query: 597 RFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
F++ +A AAQRALHGRWFAGKMITATFM Q Y+ KFP+
Sbjct: 280 HFDSVAAATAAQRALHGRWFAGKMITATFMTAQQYKMKFPN 320
>gi|413934152|gb|AFW68703.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 300
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/339 (58%), Positives = 238/339 (70%), Gaps = 42/339 (12%)
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
MSVPMAIALSGQPLLGQ VMVKPSEAEKNLVQSN++ GA+ SGGAR+LYVGNL
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAA-------SGGARKLYVGNL 53
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
H N+TEDQLRQVFEPFG VELVQLPLD TG CKG+GF+QFARLEDA+ A +LNGQL+I
Sbjct: 54 HSNITEDQLRQVFEPFGQVELVQLPLDAMTGLCKGYGFIQFARLEDAKAAQSLNGQLDIA 113
Query: 420 GRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGS 479
GR IKVSAVTD G+Q G SRA LM KLDRSG+AT++ G
Sbjct: 114 GRVIKVSAVTDHVGVQASGG-------------------SRAALMLKLDRSGTATSLTG- 153
Query: 480 AVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGTALQVPTASVPIFD 538
+ + + +P ++GAA A S L P + G+VP P L + TA I
Sbjct: 154 ----GIGAAGVAVPATSVIGAAGAASLLSPTVSAVGSVPGAP-----VLPI-TAQNVIMS 203
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRF 598
T P+E LLLKNMFDP ET +FD+DI++DV+ ECSKFG +KHIFV+K++AGFVYL+F
Sbjct: 204 T---PTEFLLLKNMFDPSLETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQF 260
Query: 599 ENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
++ +A AQ+ALHGRWFAGKMITATFM Q Y KFP+
Sbjct: 261 DSVTAAGKAQQALHGRWFAGKMITATFMSDQEYSTKFPN 299
>gi|223949785|gb|ACN28976.1| unknown [Zea mays]
gi|413957028|gb|AFW89677.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
Length = 411
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 194/244 (79%), Positives = 207/244 (84%), Gaps = 11/244 (4%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K+E EPEVDPERDQRTVFAYQ+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 150 KEEVAEPEVDPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 209
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYD MSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN+S A SGGAR
Sbjct: 210 YIEFYDAMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSGAA--------SGGAR 261
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNL 412
+LYVGNLH N+ EDQLRQVFEPFG VELVQLPLD +G CKGFGFVQFARLEDA+ A +L
Sbjct: 262 KLYVGNLHSNINEDQLRQVFEPFGQVELVQLPLDPLSGLCKGFGFVQFARLEDAKAAQSL 321
Query: 413 NGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
NGQLEI GR IKVSAVTDQ+G+Q GA TGD DD+E GGL+LNA SRALLMQKLDRSG
Sbjct: 322 NGQLEIAGRVIKVSAVTDQAGMQVSGA--TGDLDDEEAGGLALNASSRALLMQKLDRSGI 379
Query: 473 ATTI 476
T I
Sbjct: 380 TTRI 383
>gi|413957027|gb|AFW89676.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
Length = 396
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/242 (79%), Positives = 206/242 (85%), Gaps = 11/242 (4%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K+E EPEVDPERDQRTVFAYQ+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 150 KEEVAEPEVDPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 209
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYD MSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN+S A SGGAR
Sbjct: 210 YIEFYDAMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSGAA--------SGGAR 261
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNL 412
+LYVGNLH N+ EDQLRQVFEPFG VELVQLPLD +G CKGFGFVQFARLEDA+ A +L
Sbjct: 262 KLYVGNLHSNINEDQLRQVFEPFGQVELVQLPLDPLSGLCKGFGFVQFARLEDAKAAQSL 321
Query: 413 NGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
NGQLEI GR IKVSAVTDQ+G+Q GA TGD DD+E GGL+LNA SRALLMQKLDRSG
Sbjct: 322 NGQLEIAGRVIKVSAVTDQAGMQVSGA--TGDLDDEEAGGLALNASSRALLMQKLDRSGI 379
Query: 473 AT 474
T
Sbjct: 380 TT 381
>gi|414871306|tpg|DAA49863.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 357
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 214/379 (56%), Positives = 255/379 (67%), Gaps = 65/379 (17%)
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
MSVPMAIALSGQPLLGQ VMVKPSEAEKNLVQSN++ GA+ SGGAR+LYVGNL
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAA-------SGGARKLYVGNL 53
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
H N+TEDQLRQVFEPFG VELVQLP+D TG CKG+GF+QFARLEDA+ A +LNGQL+I
Sbjct: 54 HSNITEDQLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQSLNGQLDIA 113
Query: 420 GRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGS 479
GR IKVSAVTD G+Q GA TTGD DDDEGGGL+LNA SRA LM KLDRSG+AT++
Sbjct: 114 GRVIKVSAVTDHVGMQASGA-TTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSL--- 169
Query: 480 AVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ--GTVPTHPGQLGTALQVPTASVPIF 537
T + + + +P ++GA A S L+PP V G+VP P L V T +V
Sbjct: 170 --TRGIGAAGVAVPATSVIGAPGAAS-LLPPTVAAVGSVPGAP-----VLPVTTQNV--- 218
Query: 538 DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK--------- 588
T+ P+E LLLKNMFDP ET +FD+DI++DV+ ECSKFG +KHIFV+K
Sbjct: 219 -TMSTPTEFLLLKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKCYYIFLKTG 277
Query: 589 ------------------------------DSAGFVYLRFENTQSAFAAQRALHGRWFAG 618
++AGFVYL+F++ +A AQ ALHGRWFAG
Sbjct: 278 STLEKIDLGQVNYNLDAGSGICLGCPTIVVNTAGFVYLQFDSVTAAAKAQNALHGRWFAG 337
Query: 619 KMITATFMVPQTYEAKFPD 637
KMITATFM Y KFP+
Sbjct: 338 KMITATFMSALEYSTKFPN 356
>gi|62320860|dbj|BAD93824.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 308
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 200/338 (59%), Positives = 242/338 (71%), Gaps = 37/338 (10%)
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
MSVPMAIALSGQ LGQPVMVKPSEAEKNL QSNS+ GGTGP R+LYVGNL
Sbjct: 1 MSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTTV----GGTGP---ADRKLYVGNL 53
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA-LNLNGQLEI 418
HFNM+E QLRQ+FE FG VELVQLPLD ETG CKGFGF+QF +LE ++ A + LNG+LEI
Sbjct: 54 HFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEI 113
Query: 419 VGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GR IKVS+V+D G QD A + DFDDD+GGGL+LNA+SRA+LMQKLDRSG AT+I G
Sbjct: 114 AGRTIKVSSVSDHIGTQD-SAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVG 172
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIF- 537
S P +N A P G P+ P + +PT ++P F
Sbjct: 173 SLGVPGLNGAAFNQP--------------------GMNPSFPTSV-----LPTTAIPSFV 207
Query: 538 -DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYL 596
+ +G+PSECLLLKNMFDP ET FD++I++DV ECSK+G + HI+V+K+SAGFVYL
Sbjct: 208 NEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPVNHIYVDKNSAGFVYL 267
Query: 597 RFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
RF++ ++A AAQRA+H RWFA KMI+ATFM P YEAK
Sbjct: 268 RFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAK 305
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 219/549 (39%), Positives = 295/549 (53%), Gaps = 89/549 (16%)
Query: 101 HRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQ 160
H+D T + RE+R +DR RDR +R ER D DRDR+ K + R+KS
Sbjct: 22 HKDDGTHK-----REKREKKDRTRDRDSER---ERTRDQDRDRKSSKREHRDKS------ 67
Query: 161 SERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERE 220
DR+ + + E RDR+ R RS ++ RER+ ++REKERE
Sbjct: 68 -----PDRERKRHHSSHDHHRSE--RDRKHSSRPRSLEK---RRERTPPEVREQREKERE 117
Query: 221 SRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL 280
++ D RD RTVFAY + LKA+ERD++EFFS+AG + DV++
Sbjct: 118 LKELD--------------------RDIRTVFAYNLPLKAEERDLFEFFSKAGPIEDVKI 157
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGA 340
IMDRN+R+SKG Y+E+ + + A+AL+GQ L+GQ VMVK SEAEKNL + A
Sbjct: 158 IMDRNTRKSKGFAYIEYTNKADIVTAMALTGQILMGQAVMVKSSEAEKNLAWEAAQAQNA 217
Query: 341 S--------GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHC 392
S GTGP +LY+GNLH N+ E L+QVFE FG VE + L D TG
Sbjct: 218 SMLQMSTIGNAGTGPC-----KLYIGNLHPNIQEQDLKQVFEAFGAVEYITLQKDPTGRS 272
Query: 393 KGFGFVQFARLEDARNALNLNGQLEIVGR--AIKVSAVTDQSGLQDLGANTTGDFDDDEG 450
+G+GFVQ+ DA A+ L+I G ++K++ +T A D DD EG
Sbjct: 273 QGYGFVQYQTTPDATKAMQQLDGLDIAGSQISVKIAPLTPAETAAAAAAAAGLDLDDAEG 332
Query: 451 --GGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLV 508
GGL L A +RA LMQ+L S T G + A+ PLP P +V
Sbjct: 333 EHGGLKLTANARAALMQRL----SGPTDLGVLIADALG----PLPGPP---------AMV 375
Query: 509 PPLVQGTVPTHPGQLGTALQ--VPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMD 566
P GTV G A++ + S PI P++CLLLKNMFDPK ET ++D +
Sbjct: 376 P---AGTVVMSAGAQALAMEQGILGPSSPI------PTQCLLLKNMFDPKEETEPDWDQE 426
Query: 567 IKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
I DV ECSK+G + H V+K+S GFVYL+F + + AAQ+ALHGRWFAG+ + A F
Sbjct: 427 IATDVTEECSKYGPVSHTHVDKNSKGFVYLKFVTVEGSAAAQKALHGRWFAGRQVVAEFQ 486
Query: 627 VPQTYEAKF 635
Q Y + F
Sbjct: 487 FTQIYNSYF 495
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 47 DEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDT 106
++++E D +GH+ G+ R++ DR ++RDS R +RD RDR S EHRD+
Sbjct: 11 EKQLEAKDANGHKDDGTHKREKREKKDRTRDRDS--ERERTRDQDRDRKSSKREHRDKSP 68
Query: 107 ERDRDRDREERNGRDRNRDR---GRDRDRRERDHDTDRDREKDKEKERE 152
+R+R R + RDR R R +R T + + +EKERE
Sbjct: 69 DRERKRHHSSHDHHRSERDRKHSSRPRSLEKRRERTPPEVREQREKERE 117
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/201 (75%), Positives = 169/201 (84%), Gaps = 5/201 (2%)
Query: 216 EKERESRD-NDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGK 274
E++R RD +++ RR ++KKE VEPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGK
Sbjct: 168 ERDRGERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 227
Query: 275 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSN 334
VRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN
Sbjct: 228 VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN 287
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCK 393
+S A GPY R+LYVGNLHFNMTE LR++FEPFG +E+VQLPLD ETGHCK
Sbjct: 288 ASSGAAV---VGPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCK 344
Query: 394 GFGFVQFARLEDARNALNLNG 414
GFGFVQFA LE A+ A +LNG
Sbjct: 345 GFGFVQFAHLEHAKAAQSLNG 365
>gi|388496342|gb|AFK36237.1| unknown [Medicago truncatula]
Length = 202
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/201 (75%), Positives = 169/201 (84%), Gaps = 5/201 (2%)
Query: 216 EKERESRD-NDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGK 274
E++R RD +++ RR ++KKE VEPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGK
Sbjct: 5 ERDRGERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 64
Query: 275 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSN 334
VRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN
Sbjct: 65 VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN 124
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCK 393
+S A GPY R+LYVGNLHFNMTE LR++FEPFG +E+VQLPLD ETGHCK
Sbjct: 125 ASSGAAV---VGPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCK 181
Query: 394 GFGFVQFARLEDARNALNLNG 414
GFGFVQFA LE A+ A +LNG
Sbjct: 182 GFGFVQFAHLEHAKAAQSLNG 202
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/441 (42%), Positives = 258/441 (58%), Gaps = 41/441 (9%)
Query: 204 RERSRDRELKEREKERESRDND--KESRRP-KEKKEQVEPEVDPERDQRTVFAYQICLKA 260
R+RSR + ++EK +D K+ + P ++ + + PE ERD RTVF Q+ +
Sbjct: 122 RKRSRSKSPFKKEKSPFKKDKSPFKKDKSPVRQPIDNLSPE---ERDARTVFCMQLAARI 178
Query: 261 DERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVM 320
RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF D SVP+AI L+GQ +LG P++
Sbjct: 179 RPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYVEFVDSTSVPLAIGLTGQRVLGVPII 238
Query: 321 VKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVE 380
V+ S+AEKN + +S+ GG GP RLYVG+LHFN+TED LR +FEPFG +E
Sbjct: 239 VQASQAEKNRAAAMASM--LQRGGAGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIE 291
Query: 381 LVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLG 438
+QL +D ETG KG+GF+ FA E A+ AL LNG E+ GR +KV VT++S
Sbjct: 292 GIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTERSDASS-- 348
Query: 439 ANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLL 498
A++ D D+ E G+ L R LM +L G+ I PA AL + +
Sbjct: 349 ASSFLDNDELERTGIDLGTTGRLQLMARLAE-GTGLQI------PAAAKQALQMSGSVSF 401
Query: 499 GAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNE 558
G S PPL+ +PG + A+ +PT + + CL L NMF+P+ E
Sbjct: 402 GNMPNASA-TPPLI-----PNPG-MNQAMNLPTQP--------LATHCLQLSNMFNPQME 446
Query: 559 TYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFA 617
+D++I++DV EC K G + HI+V+K+SA G VY++ A A +LHGRWFA
Sbjct: 447 NEPGWDIEIRDDVIEECRKHGGVIHIYVDKNSAQGNVYVKCPTIPVAMAVVSSLHGRWFA 506
Query: 618 GKMITATFMVPQTYEAKFPDS 638
GKMITA ++ TY FPD+
Sbjct: 507 GKMITAAYVPLPTYHNLFPDA 527
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 183/439 (41%), Positives = 245/439 (55%), Gaps = 74/439 (16%)
Query: 243 DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMS 302
D ERD RT+F +Q+ K E+DVY FFS AGKVRD+R+I+D+ S R KG YVEFY +
Sbjct: 180 DYERDLRTIFVWQLAQKVTEKDVYNFFSAAGKVRDIRMIIDKRSGRHKGAAYVEFYYKEA 239
Query: 303 VPMAIALSGQPLLGQPVMVKPSEAEKNL-------------VQSNSSIAGASGGG-TGPY 348
+P A+ L+GQ L G PV +KPSEAEKN+ + + SGGG T P
Sbjct: 240 IPSAMRLAGQQLCGYPVAIKPSEAEKNIAAEMAAREAAAAQQARLAELEEWSGGGDTSPN 299
Query: 349 SGGA--RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
S +LYVG++HF+++ED LR +FEPFG V +QL D ETG +GFGFVQ+ ED
Sbjct: 300 SNPLTFTKLYVGSIHFSISEDDLRTIFEPFGEVISLQLHKDPETGRSRGFGFVQYKNHED 359
Query: 406 ARNAL-NLNGQLEIVGRAIKVSAVTDQS-GLQDLGANTTG-------------------- 443
A+ A LNG L++ GR +KV T ++ LQ LGA +G
Sbjct: 360 AKKAFEQLNG-LDLAGRPLKVGLATAEAQKLQVLGAIPSGVPGTIAAQSLSSKNYAYSAY 418
Query: 444 DFDDDEGG--GLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAA 501
+ DEGG G++L+A R LMQ+L R AL ++P LG
Sbjct: 419 ISELDEGGDSGMALSATQRTQLMQRLAR-----------------GEALASKSSPALGGK 461
Query: 502 S--AVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNET 559
S +S+ P GTVPT G + P+ +I PS CL+L+NMFDP ET
Sbjct: 462 SPGLLSSEASP-QSGTVPTRQGY----------NPPLVHSIS-PSTCLMLRNMFDPAQET 509
Query: 560 YEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAG 618
F ++++EDV EC SKFG L+HIFV+K+SAG VY++FE A A++ LHGRWFAG
Sbjct: 510 DPNFHLEVQEDVRDECISKFGPLRHIFVDKNSAGLVYVQFETMSDAMKAKQGLHGRWFAG 569
Query: 619 KMITATFMVPQTYEAKFPD 637
+ ++ Y +FPD
Sbjct: 570 HQVIVEYISESVYYIRFPD 588
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 179/433 (41%), Positives = 250/433 (57%), Gaps = 26/433 (6%)
Query: 211 ELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFS 270
+L+ R K + + +K R + + PE ERD RTVF Q+ + RD+ EFFS
Sbjct: 121 KLRRRSKSKSPQKREKSPVR--GPIDNLSPE---ERDARTVFCMQLAARIRPRDLEEFFS 175
Query: 271 RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNL 330
GKVRDVR+I DRNSRRSKG+ YVEF D SVP+AI L+GQ +LG P++V+ S+AEKN
Sbjct: 176 TVGKVRDVRMISDRNSRRSKGIAYVEFVDQSSVPLAIGLTGQKVLGVPIIVQASQAEKNR 235
Query: 331 VQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ET 389
A A + G RLYVG+LHFN+TED LR +FEPFG +E +QL +D ET
Sbjct: 236 -------AAAMANNLQKGTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 288
Query: 390 GHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDD 448
G KG+GF+ F+ E A+ AL LNG E+ GR +KV VT+++ + A++ D D+
Sbjct: 289 GRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDASN--ASSFLDSDEL 345
Query: 449 EGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLV 508
E G+ L R LM +L G + PA AL + + GA + + T +
Sbjct: 346 ERTGIDLGTTGRLQLMARLAEG------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTRI 398
Query: 509 PPLVQGTVPTHPGQLGTALQVPTASVPIFDTI-GVPSECLLLKNMFDPKNETYEEFDMDI 567
+ +L ++++PI T + ++C L NMF+P+ E +D +I
Sbjct: 399 SQQSEALAAAAASAATISLAAASSTLPIPATTQPIATQCFQLSNMFNPQTEDELGWDSEI 458
Query: 568 KEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
KEDV EC+K G + HI+V+K+S G VY++ SA AA ALHGRWFAGKMITA ++
Sbjct: 459 KEDVIEECNKHGGVVHIYVDKNSPQGNVYVKCPTIASAIAAVNALHGRWFAGKMITAAYV 518
Query: 627 VPQTYEAKFPDSI 639
TY + FPDS+
Sbjct: 519 PLPTYHSLFPDSM 531
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/413 (41%), Positives = 229/413 (55%), Gaps = 59/413 (14%)
Query: 229 RRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRR 288
R+P E + E E+DQRTVF Q+ RD+ EFFS+ G+V DVR+I DRNSRR
Sbjct: 102 RKPPEPMTEESAE---EKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRR 158
Query: 289 SKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPY 348
SKG+ Y+EF D +VP+AI LSGQ LLG P+MV ++AEKN + + + G T
Sbjct: 159 SKGIAYIEFTDKSAVPLAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGPT--- 215
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDAR 407
RLYVG+LHFN+TE ++ VFEPFGTV+ VQL D ET KG+GFVQF E A+
Sbjct: 216 -----RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAK 270
Query: 408 NALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL 467
A+ E+ GR +K+ VT++ D A + D ++ E GG+ LN+ +RA LM KL
Sbjct: 271 RAMEQMNGFELAGRPLKIGPVTERG---DSSAYSFLDDEEYEKGGVELNSSARAALMAKL 327
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTAL 527
+ SA L +P A PP+V G + AL
Sbjct: 328 SQGHSA---------------GLSVPGA-------------PPIVSG--------VQQAL 351
Query: 528 QVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVE 587
P A + +P+ C +L NMFDP E +D+DI++DV EC+KFG + HI V+
Sbjct: 352 ATPVA-------VSLPTPCFMLTNMFDPTKERDAGWDLDIRDDVLEECNKFGPIVHIHVD 404
Query: 588 KDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
K+S G VY++ A +A ++LHGRWFAGK I A + Y FP SI
Sbjct: 405 KNSPQGIVYVKCATPDIAISASKSLHGRWFAGKQIIAAPVPLSNYHTMFPQSI 457
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 173/399 (43%), Positives = 241/399 (60%), Gaps = 21/399 (5%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ YVEF D SVP
Sbjct: 148 ERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFLDQSSVP 207
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+AI L+GQ +LG P++V+ S+AEKN +++A GT G RLYVG+LHFN+
Sbjct: 208 LAIGLTGQKVLGVPIIVQASQAEKN---RAAALANNLQKGT----AGPMRLYVGSLHFNI 260
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRA 422
TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL LNG E+ GR
Sbjct: 261 TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRP 319
Query: 423 IKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVT 482
+KV VT+++ + A++ D D+ E G+ L R LM +L G +
Sbjct: 320 MKVGHVTERTDASN--ASSFLDSDELERTGIDLGTTGRLQLMARLAEG------TGLQIP 371
Query: 483 PAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTI-G 541
PA AL + + GA + + T + + ++ + +A++PI T
Sbjct: 372 PAAQQ-ALQMSGSLAFGAVADLQTRISQQSEALAAAAAAASAASITLASATLPIPATTQP 430
Query: 542 VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFEN 600
+ ++C L NMF+P+ E +D +IKEDV EC+K G + H++V+K+SA G VY++
Sbjct: 431 IATQCFQLSNMFNPQTEDELGWDSEIKEDVIEECNKHGGVVHLYVDKNSAQGNVYVKCPT 490
Query: 601 TQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA AA ALHGRWFAGKMITA ++ TY + FPDS+
Sbjct: 491 IASAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSM 529
>gi|410899827|ref|XP_003963398.1| PREDICTED: RNA-binding protein 39-like [Takifugu rubripes]
Length = 500
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 179/450 (39%), Positives = 251/450 (55%), Gaps = 55/450 (12%)
Query: 193 RERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVF 252
R + R + +R +SR KER R+ DN + PE ERD RTVF
Sbjct: 92 RYKPRRSPIRKRSKSRSPVKKERSPIRQPIDN-------------LTPE---ERDARTVF 135
Query: 253 AYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQ 312
Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF + SVP+AI L+GQ
Sbjct: 136 CMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVESSSVPLAIGLTGQ 195
Query: 313 PLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQV 372
LLG P++V+ S+AEKN ++ ++ G +GP RLYVG+LHFN+TE+ LR +
Sbjct: 196 RLLGVPIIVQASQAEKN--RAAAAANNLQKGSSGPM-----RLYVGSLHFNITEEMLRGI 248
Query: 373 FEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTD 430
FEPFG +E +QL +D ETG KG+GF+ FA E A+ AL LNG E+ GR +KV VT+
Sbjct: 249 FEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTE 307
Query: 431 QSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTAL 490
+S A++ D D+ E G+ L R LM +L G + PA
Sbjct: 308 RS--DSSTASSILDNDELERTGIDLGTTGRLQLMARLAEG------TGLKIPPAAQQALQ 359
Query: 491 PLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLK 550
+ G+ S + PP V P+ AL +P + + CL L
Sbjct: 360 ------MTGSMSFPTISGPPAVPTPSPSQ------ALNLPAQPLA--------THCLQLS 399
Query: 551 NMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQR 609
N+F+P+ E + ++I++DV EC+K G + HI+V+K+S G VY++ + +A A
Sbjct: 400 NLFNPQAENDPSWAVEIQDDVIEECNKHGGVVHIYVDKNSTQGNVYVKCPSIPAAMATVN 459
Query: 610 ALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 460 ALHGRWFAGKMITAAYVPLPTYHNLFPDSV 489
>gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 183/459 (39%), Positives = 259/459 (56%), Gaps = 58/459 (12%)
Query: 184 RSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVD 243
R + R R+RS+ R +++ERS R DK +P + + PE
Sbjct: 101 RYKPRRSPIRKRSKTRSPVKKERSPVRL-------------DKTFIQPID---NLTPE-- 142
Query: 244 PERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF + SV
Sbjct: 143 -ERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVESSSV 201
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
P+AI L+GQ LLG P++V+ S+AEKN ++ ++ G +GP RLYVG+LHFN
Sbjct: 202 PLAIGLTGQRLLGVPIIVQASQAEKN--RAAAAANNLQKGSSGPM-----RLYVGSLHFN 254
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGR 421
+TE+ LR +FEPFG +E +QL +D ETG KG+GF+ FA E A+ AL LNG E+ GR
Sbjct: 255 ITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG-FELAGR 313
Query: 422 AIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAV 481
+KV VT++S A++ D D+ E G+ L R LM +L G+ I +A
Sbjct: 314 PMKVGHVTERS--DSSTASSILDNDELERTGIDLGTTGRLQLMARLAE-GTGLKIPPAAQ 370
Query: 482 TPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIG 541
+ ++ PT +G AV T P AL +P
Sbjct: 371 QALQMTGSMSFPT---IGGPPAVPTPSP--------------SQALNLPAQP-------- 405
Query: 542 VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFEN 600
+ + CL L N+F+P+ E + ++I++DV EC+K G + HI+V+K+SA G VY++ +
Sbjct: 406 LATHCLQLSNLFNPQAENDPSWAVEIQDDVIEECNKHGGVVHIYVDKNSAQGNVYVKCPS 465
Query: 601 TQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+A A ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 466 IPAAMATVNALHGRWFAGKMITAAYVPLPTYHNLFPDSV 504
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 180/430 (41%), Positives = 242/430 (56%), Gaps = 35/430 (8%)
Query: 222 RDNDKESRRPKEKKEQVEPEVD----PERDQRTVFAYQICLKADERDVYEFFSRAGKVRD 277
R K PK +K V +D ERD RTVF Q+ + RD+ EFFS GKVRD
Sbjct: 95 RKRSKSRSPPKREKSPVRGPIDNLSPEERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRD 154
Query: 278 VRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSI 337
VR+I DRNSRRSKG+ YVEF D SVP+AI L+GQ +LG P++V+ S+AEKN +++
Sbjct: 155 VRMISDRNSRRSKGIAYVEFVDQSSVPLAIGLTGQRVLGVPIIVQASQAEKN---RAAAL 211
Query: 338 AGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFG 396
A GT G RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+G
Sbjct: 212 ANNLQKGT----AGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 267
Query: 397 FVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSL 455
F+ F+ E A+ AL LNG E+ GR +KV VT+++ + A++ D D+ E G+ L
Sbjct: 268 FITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDASN--ASSFLDSDELERTGIDL 324
Query: 456 NARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVP-----P 510
R LM +L G + PA AL + + GA + + T +
Sbjct: 325 GTTGRLQLMARLAEG------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTRISQQSEAL 377
Query: 511 LVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKED 570
+ L P + PI ++C L NMF+P+ E +D +IKED
Sbjct: 378 AAAAASAATISLAQSPLPTPATTQPI------ATQCFQLSNMFNPQTEDELGWDSEIKED 431
Query: 571 VEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQ 629
V EC+K G HI+V+K+S G VY++ SA AA ALHGRWFAGKMITA ++
Sbjct: 432 VMEECNKHGGAIHIYVDKNSPQGNVYVKCSTITSAIAAVNALHGRWFAGKMITAAYVPVP 491
Query: 630 TYEAKFPDSI 639
TY + FPDS+
Sbjct: 492 TYHSLFPDSM 501
>gi|209155056|gb|ACI33760.1| RNA-binding protein 39 [Salmo salar]
Length = 535
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/403 (41%), Positives = 234/403 (58%), Gaps = 38/403 (9%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF + SVP
Sbjct: 152 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFLEANSVP 211
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+AI L+GQ LLG P++V+ S+AEKN + ++ G GP RLYVG+LHFN+
Sbjct: 212 LAIGLTGQRLLGVPIIVQASQAEKNRAAAMAN--NLQKGNAGPM-----RLYVGSLHFNI 264
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRA 422
TED LR +FEPFG +E +QL +D ET KG+GF+ FA E A+ AL LNG E+ GR
Sbjct: 265 TEDMLRGIFEPFGRIESIQLMMDSETARSKGYGFISFADAECAKKALEQLNG-FELAGRP 323
Query: 423 IKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVT 482
+KV VT+++ A++ D D+ E G+ L R LM +L G +
Sbjct: 324 MKVGNVTERT--DSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEG------TGLQIP 375
Query: 483 PAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPG-----QLGTALQVPTASVPIF 537
PA AL + G+ + S + GT +P + A+ +PT
Sbjct: 376 PAAQQ-ALQMS-----GSMHSSSIHFGNMAAGTAIANPALNLGPSMNQAMNLPTQP---- 425
Query: 538 DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYL 596
+ + CL L NMF P++E +D++I++DV EC+K G + HI+V+K+S G VY+
Sbjct: 426 ----LATHCLQLSNMFSPQSENEPGWDIEIQDDVMEECNKHGGIVHIYVDKNSPQGNVYV 481
Query: 597 RFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+ +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 482 KCPTIPTAMAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSV 524
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 238/411 (57%), Gaps = 41/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 188 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 244
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 245 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 297
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 298 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 357
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 358 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 414
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T + Q L
Sbjct: 415 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTRL------------SQQNEVLAA 455
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
+ P+ ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 456 AASVQPL------ATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKN 509
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY + FPDS+
Sbjct: 510 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSM 560
>gi|255082273|ref|XP_002508355.1| predicted protein [Micromonas sp. RCC299]
gi|226523631|gb|ACO69613.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/412 (41%), Positives = 231/412 (56%), Gaps = 48/412 (11%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
+RD RTVFAY + KADERD+Y+FFS+AG V DVR+I DRN+ RSKG+ Y+EF D ++
Sbjct: 132 DRDTRTVFAYNLSTKADERDIYQFFSKAGTVNDVRIIYDRNTPRSKGMAYIEFADKANIT 191
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLV----QSNSSIAGASGGGTGP-----------YS 349
A+AL+GQ L Q VMVK SEAEKN+ Q+ + + G T P +
Sbjct: 192 DALALTGQMLRNQVVMVKASEAEKNIAWEAEQAQKKLEMKALGATDPASAAAAVNAQAHG 251
Query: 350 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNA 409
G +L V L N+ E L+ VFEPFG + + + D TG +G GFVQ+ + + A A
Sbjct: 252 NGPCKLQVHGLDVNIGETDLKAVFEPFGETDFISIQRDSTGRSRGVGFVQYKQTQHAVLA 311
Query: 410 LN-LNGQLEIVGRAIKVS-AVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL 467
++ LNG LE+VG+++KV+ A S L A + DE G+ L++RSRA LM KL
Sbjct: 312 ISQLNG-LELVGQSLKVTMAPIAASTLNAAQAASMVTDKIDEQEGVRLDSRSRAALMAKL 370
Query: 468 ---DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTV-PTHPGQL 523
D + A G + P T LP+ + A A QG + P P
Sbjct: 371 AGQDETQGALYSGG--IDP---KTGLPVSAEEMAAAQRAAHMTEVEFAQGVLGPASP--- 422
Query: 524 GTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKH 583
+P++CLLLKNMFDP ET E+ +DI EDV+ ECSK G + H
Sbjct: 423 ------------------IPTQCLLLKNMFDPAEETEPEWWIDIGEDVKDECSKHGPVSH 464
Query: 584 IFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
I V+K+S GFVYL+F +T+ A AA++ALHGRWFAGKMI A F Y F
Sbjct: 465 IHVDKESRGFVYLKFGSTEGASAARQALHGRWFAGKMIAAEFQFVPVYNKHF 516
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 177/411 (43%), Positives = 238/411 (57%), Gaps = 30/411 (7%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA +A P + TAL
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAA-KIFFPFFIDLQTRLSQQSEVTALAA 417
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
+ P+ ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 418 AASVQPL------ATQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKN 471
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 472 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 522
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 238/411 (57%), Gaps = 41/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T + Q L
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVTDLQTRL------------SQQNEVLAA 406
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
+ P+ ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 407 AASVQPL------ATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKN 460
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY + FPDS+
Sbjct: 461 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSM 511
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 238/411 (57%), Gaps = 41/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T + Q L
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTRL------------SQQNEVLAA 406
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
+ P+ ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 407 AASVQPL------ATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKN 460
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY + FPDS+
Sbjct: 461 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSM 511
>gi|432865706|ref|XP_004070573.1| PREDICTED: RNA-binding protein 39-like [Oryzias latipes]
Length = 516
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 183/467 (39%), Positives = 255/467 (54%), Gaps = 66/467 (14%)
Query: 181 ERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEP 240
R RSR ++ R ++R V +R +SR KER R+ DN + P
Sbjct: 97 HRSRSRSKDRTGRYKARKSPVRKRTKSRSPPKKERSPVRQPIDN-------------LTP 143
Query: 241 EVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDV 300
E ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF +
Sbjct: 144 E---ERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVET 200
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
SVP+AI L+GQ LLG P++V+ S+AEKN ++ ++ G GP RLYVG+L
Sbjct: 201 SSVPLAIGLTGQRLLGVPIIVQASQAEKN--RAAAAANNLQKGSAGPM-----RLYVGSL 253
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEI 418
HFN+TE+ LR +FEPFG +E +QL +D ETG KG+GF+ FA E A+ AL LNG E+
Sbjct: 254 HFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG-FEL 312
Query: 419 VGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GR +KV VT++S A++ D D+ E G+ L R LM +L
Sbjct: 313 AGRPMKVGHVTERS--DSSTASSFLDNDELERTGIDLGTTGRLQLMARL----------- 359
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFD 538
T L +P A A A+ + G++P G +
Sbjct: 360 ------AEGTGLKIPPA----AQQALQ------MTGSIP-----FGNMAAPAIPTPAPSQ 398
Query: 539 TIGVPSE-----CLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-G 592
+ +PS+ CL L N+FDP+ E + +I++DV EC+K G + HI+V+K+S G
Sbjct: 399 ALNLPSQPLATHCLQLSNLFDPQAENDPAWASEIQDDVIEECNKHGGVVHIYVDKNSPQG 458
Query: 593 FVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
VY++ + +A A ALHGRWFA KMITA ++ TY FPDS+
Sbjct: 459 NVYVKCPSIPAAMATVNALHGRWFARKMITAAYVPLPTYHNLFPDSV 505
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/411 (43%), Positives = 240/411 (58%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T + Q V TAL
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTRLSQ--QSEV--------TALAA 408
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
+ P+ ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 409 AASVQPL------ATQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKN 462
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 463 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 513
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 178/411 (43%), Positives = 240/411 (58%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 172 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 228
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 229 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 281
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 282 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 341
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 342 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 398
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T + Q V TAL
Sbjct: 399 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTRLSQ--QSEV--------TALAA 441
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
+ P+ ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 442 AASVQPL------ATQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKN 495
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 496 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 546
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 203/582 (34%), Positives = 294/582 (50%), Gaps = 88/582 (15%)
Query: 60 SRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNG 119
R + R SR+H++R +RD H SR+ +DR + R+RDRDR R
Sbjct: 12 CRSKRDRSHSRDHEKRSKRDRDKHDKRSRNSRS----RHSRDKDRHSSRERDRDRHSRE- 66
Query: 120 RDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREV 179
RDR+ R RDR+R H DRD R +R DRD R RDR
Sbjct: 67 RDRHSSRERDRNR----HSRDRD-------------RYSKDRDRRSRDRDRHSRERDRYS 109
Query: 180 IERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVE 239
ER+R R R + ++ E + + R + P K ++
Sbjct: 110 RERDRYRSRRRSISPNNLAPHLLNNEYAYKKYASYR-------------KSPTFSKLPID 156
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
ERDQRTVF Q+ + RD+ EFFS GKVRDV+LI +RR KG+ YVEF D
Sbjct: 157 DLTPEERDQRTVFCMQLSQRIRGRDLEEFFSSVGKVRDVKLITCNKTRRFKGIAYVEFKD 216
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
SVP+A+ L+GQ LLG P+ V+P++AEKN ++++ GP RLYVG+
Sbjct: 217 PESVPLAMGLTGQKLLGIPISVQPTQAEKNRQGNSTAPMMMPSDMRGPM-----RLYVGS 271
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLE 417
LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ F +DA+ AL LNG E
Sbjct: 272 LHFNITEDMLRGIFEPFGKIDSIQLIMDPETGRSKGYGFITFHSADDAKKALEQLNG-FE 330
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIA 477
+ GR +KV V +++ ++ + D D+ + G+ L A R LM KL
Sbjct: 331 LAGRPMKVGNVQERT--DNIAGTSILDTDELDRSGIDLGATGRLQLMYKL---------- 378
Query: 478 GSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIF 537
T + +P P A ++ +P VQ P
Sbjct: 379 -------AEGTGMQIP--PAAATALNLANALPQAVQPAPP-------------------- 409
Query: 538 DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLR 597
+ ++C +L NMFDP ET +D++I++DV EC+K G + H++V+K S G VY++
Sbjct: 410 ----IATQCFMLANMFDPATETNPTWDVEIRDDVIEECNKHGGVLHVYVDKTSNGNVYVK 465
Query: 598 FENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+A A+ +LHGRWFAG++ITA ++ Y + FPD++
Sbjct: 466 CPTIATAVASVNSLHGRWFAGRIITAAYVPLLNYHSHFPDAL 507
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 178/411 (43%), Positives = 238/411 (57%), Gaps = 41/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 195 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 251
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 252 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 304
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 305 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 364
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 365 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 421
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G+ I +A S +L A SAV+ L T Q L
Sbjct: 422 -GTGLQIPPAAQQALQMSGSL---------AFSAVADL---------QTRLSQQSEVLAA 462
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
+ P+ ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 463 AASVQPL------ATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVVHIYVDKN 516
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 517 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 567
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 117 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 173
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 174 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 226
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 227 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 286
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 287 EQLNG-FELTGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 343
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 344 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 396
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 397 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 445
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 446 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 497
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 117 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 173
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 174 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 226
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 227 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 286
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 287 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 343
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 344 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 396
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 397 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 445
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 446 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 497
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 108 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 164
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 165 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 217
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 218 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 277
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 278 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 334
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 335 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 387
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 388 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 436
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 437 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 488
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 418
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 419 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 467
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 468 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 519
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELTGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 418
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 419 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 467
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 468 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 519
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 418
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 419 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 467
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 468 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 519
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 130 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 186
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 187 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 239
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 240 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 299
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 300 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 356
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 357 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 409
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 410 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 458
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 459 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 510
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 122 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 178
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 179 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 231
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 232 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 291
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 292 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 348
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 349 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 401
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 402 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 450
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 451 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 502
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 238/411 (57%), Gaps = 41/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 40 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 96
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 97 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 149
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 150 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 209
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 210 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 266
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T + Q L
Sbjct: 267 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTRL------------SQQNEVLAA 307
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
+ P+ ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 308 AASVQPL------ATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKN 361
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY + FPDS+
Sbjct: 362 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSM 412
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 179/428 (41%), Positives = 249/428 (58%), Gaps = 36/428 (8%)
Query: 216 EKERESRDNDKESRRPKEKKEQVEPEVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGK 274
E+ER R N S+ P Q PE+ PE RD RTVF Q+ + RD+ EFFS GK
Sbjct: 132 ERERRQRSN---SKSPMRYTRQPGPELTPEERDARTVFCMQLSARIRPRDLEEFFSSVGK 188
Query: 275 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSN 334
VRDVRLIMD +RRSKG+ YVEF D SVP+AI L+ Q LLG P++V+ S+AEKN V +
Sbjct: 189 VRDVRLIMDNKTRRSKGISYVEFQDTDSVPLAIGLTNQKLLGVPIIVQHSQAEKNRVGNP 248
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCK 393
+SI + G GP RLYVG+LHFN+TE+ LR +FEPFG ++ ++L D ET +
Sbjct: 249 TSI--LTKGNIGPM-----RLYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQ 301
Query: 394 GFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGG 452
G+GF+ F EDA+ AL LNG E+ GR +KV VT++ G ++ + D D+ + G
Sbjct: 302 GYGFITFHDSEDAKKALEQLNG-FELAGRPMKVGHVTERQG--EIQGASMLDSDEMDRAG 358
Query: 453 LSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLV 512
+ L A R LM KL G+ I AV+ A+N T AP + +A+ + P +
Sbjct: 359 IDLGATGRLQLMAKL-AEGTGFQIPEYAVS-ALNITQ----QAPGVASAAPPAGPAPNVS 412
Query: 513 QGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVE 572
GQ TA + T +C +L NMFDP E+ +D +I++DV
Sbjct: 413 AILGSQAAGQDNTAPPIAT-------------QCFMLSNMFDPNAESRSSWDQEIRDDVI 459
Query: 573 GECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTY 631
EC+K G + H++V+K S G VY++ +A A+ RALHGR+F GKMITA ++ Y
Sbjct: 460 EECNKHGGVLHLYVDKASPQGNVYVKCPTISAAVASVRALHGRYFGGKMITAAYVPLPNY 519
Query: 632 EAKFPDSI 639
+ FPD++
Sbjct: 520 HSLFPDAV 527
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 174/418 (41%), Positives = 239/418 (57%), Gaps = 37/418 (8%)
Query: 226 KESRRP-KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
K+ R P ++ + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DR
Sbjct: 128 KKDRSPVRQPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRIISDR 184
Query: 285 NSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG 344
NSRRSKG+ Y+EF D SVP+AI LSGQ LLG P++V+ S+AEKN A A
Sbjct: 185 NSRRSKGIAYIEFVDSTSVPLAIGLSGQRLLGVPIIVQASQAEKNR-------AAALANN 237
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
S G RLYVG+LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ F+
Sbjct: 238 LQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDA 297
Query: 404 EDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRAL 462
E A+ AL LNG E+ GR +KV VT+++ A++ D D+ E G+ L R
Sbjct: 298 ECAKKALEQLNG-FELAGRPMKVGHVTERTDAST--ASSFLDNDELERTGIDLGTTGRLQ 354
Query: 463 LMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQ 522
LM +L T L +P P A +S + + T +PG
Sbjct: 355 LMARL-----------------AEGTGLQIP--PAAQQALQMSGSMVAMAAATAAMNPG- 394
Query: 523 LGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLK 582
L + VPT + + + C L NMF+P +E ++++I++DV EC+K G +
Sbjct: 395 LSFNINVPTNQALNLPSQPIATHCFQLSNMFNPNSENDHGWEIEIQDDVIEECNKHGGVI 454
Query: 583 HIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
HI+V+K SA G VY++ +A AA ALHGRWF GKMITA ++ TY FP+S+
Sbjct: 455 HIYVDKKSAEGNVYVKCPTIPAAMAAVSALHGRWFGGKMITAAYVPLPTYHNLFPESV 512
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 113 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 169
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 170 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 222
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 223 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 282
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 283 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 339
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 340 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 392
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 393 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 441
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 442 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 493
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 112 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 168
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 169 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 221
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 222 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 281
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 282 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 338
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 339 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 391
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 392 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 440
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 441 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 492
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 106 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 162
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 163 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 215
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 216 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 275
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 276 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 332
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 333 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 385
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 386 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 434
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 435 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 486
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 186/471 (39%), Positives = 257/471 (54%), Gaps = 76/471 (16%)
Query: 217 KERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
K+ E +++ RR K+K+ + + +RD+RTVFA + ++A E +++EFF +AGKV
Sbjct: 142 KDDEILTPEEQERRRKQKEAE-----EADRDERTVFASNLPIRASESELFEFFGKAGKVH 196
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKNLVQSNS 335
D+RLI DRNSR+SKG GY+E+ D SVP+A+ L+G GQ V+V+ ++AEKN + +
Sbjct: 197 DIRLITDRNSRKSKGFGYIEYLDKSSVPLALHQLNGTQCKGQTVLVQITQAEKNRAAAAA 256
Query: 336 SIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKG 394
+ A A+ P RLYVGNLH ++ ED LR VFEPFG ++ + L +D ETG KG
Sbjct: 257 AAAAAN---APPSLSAPTRLYVGNLHTDLAEDDLRTVFEPFGDIQQINLHIDPETGRSKG 313
Query: 395 FGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFD-------- 446
F FVQ+ EDA+ AL +E+ GR +KV V+D L G
Sbjct: 314 FAFVQYKSPEDAKKALQHCNGMELAGRQLKVGIVSDPGTLTAGGPGAGLGGPIGFGGGGA 373
Query: 447 ----------------------DDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPA 484
DDEGGGL LNA+SRA+LM +L G A P+
Sbjct: 374 FGGGGGFGGGGFGGGGGGLNELDDEGGGLGLNAQSRAMLMARLAGQ------TGGAGFPS 427
Query: 485 VNSTALPLPTAPL--LGAASAVSTLVPPLVQGT-VPTHPGQLGTALQVPTASVPIFDTIG 541
LP AP+ G A L+P ++ G +P PG L +AL A P+ T G
Sbjct: 428 -------LPGAPMGFHGMTPAGLGLLPGVLPGLGMPGMPG-LPSALGGLGAPSPLLPTAG 479
Query: 542 ------------------VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKH 583
V S +LLKNMFDP ET F +DI+EDV ECSK+GK+
Sbjct: 480 AMPMPTPIIPPTVAPRPVVASAFMLLKNMFDPAQETEPNFHLDIQEDVTEECSKYGKVLQ 539
Query: 584 IFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
V +DS +G VYLRFE+++ A A +AL+GRWFAGK+I+A F+ T+ A
Sbjct: 540 CHVVRDSPSGLVYLRFESSEGAAKAIQALNGRWFAGKVISAEFIDENTFAA 590
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 174/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 117 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 173
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 174 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 226
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 227 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 286
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 287 EQLNG-FELTGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 343
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T + + + +
Sbjct: 344 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQ----- 391
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 392 PLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 440
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 441 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 491
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 174/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 117 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 173
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 174 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 226
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 227 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 286
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 287 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 343
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T + + + +
Sbjct: 344 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQ----- 391
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 392 PLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 440
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 441 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 491
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 177/412 (42%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYMEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 418
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 419 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 467
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 468 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 519
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 106 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 162
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 163 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 215
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 216 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 275
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 276 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 332
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 333 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 382
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 383 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 429
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 430 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 480
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 117 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 173
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 174 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 226
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 227 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 286
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 287 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 343
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T + + + +
Sbjct: 344 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQ----- 391
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 392 PLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 440
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 441 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 491
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 216 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 272
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 273 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 325
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 326 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 385
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 386 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 442
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 443 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 492
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 493 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 539
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 540 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 590
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 143 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 199
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 200 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 252
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 253 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 312
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 313 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 369
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 370 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 419
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 420 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 466
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 467 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 517
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 145 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 201
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 202 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 254
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 255 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 314
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 315 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 371
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 372 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 421
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 422 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 468
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 469 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 519
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 145 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 201
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 202 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 254
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 255 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 314
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 315 EQLNG-FELTGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 371
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 372 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 421
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 422 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 468
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 469 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 519
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 415
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 416 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 462
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 463 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 513
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 186/437 (42%), Positives = 235/437 (53%), Gaps = 63/437 (14%)
Query: 231 PKEKKEQVEPEVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRS 289
P +KK+ P++ PE RD RTVF +Q+ K RD+ EFFS G VRDVRLI DRNSRRS
Sbjct: 30 PSKKKDL--PDLPPEERDARTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRS 87
Query: 290 KGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYS 349
KG+ YVEF D SVP+A+ LSGQ LL P+MV+ S+AEKN NS G +GP
Sbjct: 88 KGIAYVEFQDKNSVPLALGLSGQKLLSIPIMVQASQAEKNRAAQNSQ--NLQKGNSGP-- 143
Query: 350 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARN 408
RLYVG+LHFN+TE+ LR +FEPFG ++ +QL D ETG KG+GF+ F EDA+
Sbjct: 144 ---MRLYVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKK 200
Query: 409 AL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDF---DDDEGGGLSLNARSRALLM 464
AL LNG E+ GR +KV VT++S A T F DD E G+ L R LM
Sbjct: 201 ALEQLNG-FELAGRPMKVGHVTERS-----DAATDASFLDSDDLERSGIDLGTTGRLQLM 254
Query: 465 QKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTV-------- 516
KL G V A + PL P +G P++ GT
Sbjct: 255 AKLAEG------TGFQVPAAAAAALNPLAGLPGIGL---------PVLPGTTPPQVMPPQ 299
Query: 517 -------------PTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEF 563
PT S+P +I P C +L NMFDP NET +
Sbjct: 300 PVNLQASLAAAQQQAQQQAAALHQPPPTVSMP---SIATP--CFMLSNMFDPTNETSSGW 354
Query: 564 DMDIKEDVEGECSKFGKLKHIFVEK-DSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 622
D +I++DV EC+K G HI+V+K + G VY++ Q A A ALHGRWFAGKMIT
Sbjct: 355 DREIQDDVIEECNKHGGCVHIYVDKTNPLGVVYVKCATVQIAQMAVNALHGRWFAGKMIT 414
Query: 623 ATFMVPQTYEAKFPDSI 639
A ++ Y A FP +I
Sbjct: 415 AAYVPLANYHALFPQAI 431
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELTGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 415
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 416 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 462
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 463 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 513
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 415
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 416 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 462
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 463 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 513
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 115 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 171
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 172 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 224
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 225 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 284
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 285 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 341
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 342 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 394
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 395 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 443
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 444 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 495
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 192
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 193 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 245
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 305
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 306 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 362
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 363 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 412
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 413 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 459
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 460 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 510
>gi|348503003|ref|XP_003439056.1| PREDICTED: RNA-binding protein 39-like [Oreochromis niloticus]
Length = 498
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 248/450 (55%), Gaps = 55/450 (12%)
Query: 193 RERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVF 252
R R+R + +R RSR KE+ R DN + PE ERD RTVF
Sbjct: 90 RYRARRSPIRKRSRSRSPFKKEKSPIRAPIDN-------------LTPE---ERDARTVF 133
Query: 253 AYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQ 312
Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF + SVP+AI L+GQ
Sbjct: 134 CMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVESSSVPLAIGLTGQ 193
Query: 313 PLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQV 372
LLG P++V+ S+AEKN ++ ++ G +GP RLYVG+LHFN+TE+ LR +
Sbjct: 194 RLLGVPIIVQASQAEKN--RAAAAANNLQKGSSGPM-----RLYVGSLHFNITEEMLRGI 246
Query: 373 FEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTD 430
FEPFG +E +QL +D ETG KG+GF+ FA E A+ AL LNG E+ GR +KV VT+
Sbjct: 247 FEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTE 305
Query: 431 QSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTAL 490
+S A++ D D+ E G+ L R LM +L G + PA
Sbjct: 306 RS--DSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEG------TGLKIPPAAQQALQ 357
Query: 491 PLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLK 550
+ P G + + P Q AL +P+ + + CL L
Sbjct: 358 MTGSIPFGGIGAPAAVPTPAPSQ------------ALNLPSQP--------LATHCLQLS 397
Query: 551 NMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQR 609
N+F+P+ E + +I++DV EC+K G + HI+V+K+S G VY++ + +A A
Sbjct: 398 NLFNPQAENDPSWAAEIQDDVIEECNKHGGIVHIYVDKNSPQGNVYVKCPSIPAAMATVN 457
Query: 610 ALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 458 ALHGRWFAGKMITAAYVPLPTYHNLFPDSV 487
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/411 (42%), Positives = 237/411 (57%), Gaps = 39/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 122 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 178
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 179 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 231
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 232 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 291
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 292 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 348
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 349 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 398
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 399 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 445
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 446 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 496
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 240/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 38 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 94
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 95 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 147
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 148 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 207
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 208 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 264
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 265 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 317
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 318 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 366
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 367 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 418
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 236/411 (57%), Gaps = 40/411 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEK A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKR--------AAAMANNLQKGSAG 247
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 248 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 307
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 308 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 364
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 365 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 414
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 415 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 461
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 462 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 512
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 242/446 (54%), Gaps = 81/446 (18%)
Query: 198 DREVIERER---SRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAY 254
DREVI R R + L +RE+E + +E V E ERD RTVF
Sbjct: 147 DREVIRRSRDGVTTISLLSDREREWD--------------EEHVSQE---ERDSRTVFIM 189
Query: 255 QICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
Q+ + RD+ +FFS+ G+VRDVRLI DRNSRRSKG+GYVEF D +V +AI LSGQ L
Sbjct: 190 QLAKQVTIRDIQDFFSKVGQVRDVRLISDRNSRRSKGIGYVEFTDASAVTLAIKLSGQKL 249
Query: 315 LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFE 374
LG P+MV P+ AEKN A A P G +LYVG+LH+N+TE LR +FE
Sbjct: 250 LGVPIMVSPTMAEKN------RYAAAQAALVKPQ--GPMKLYVGSLHYNITEPMLRAIFE 301
Query: 375 PFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSG 433
PFGTVE VQL D ET KGFGFV F A+ A+ E+ GR +KV+ V++++
Sbjct: 302 PFGTVESVQLQYDSETNRSKGFGFVNFREAGAAKRAMEQMNGFELAGRPMKVNTVSERTD 361
Query: 434 LQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLP 493
G+ + D ++ E GG+ +NA+SRA LMQKL ++ + + L +P
Sbjct: 362 ----GSMSFLDDEETEKGGIEMNAQSRASLMQKLAQT---------------HGSGLQVP 402
Query: 494 TAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMF 553
TAP++ A +PT P+ + G S CL+L N+F
Sbjct: 403 TAPIIPA---------------------------MLPT---PMMNVAG--STCLILSNLF 430
Query: 554 DPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALH 612
DP+ ET ++++DI+ DV E +K G + HI ++K SA G VY++ +A + +
Sbjct: 431 DPRKETESDWELDIRNDVLEEVTKMGIVVHISIDKISAEGNVYIKTLIPDTAQKILQTFN 490
Query: 613 GRWFAGKMITATFMVPQTYEAKFPDS 638
GRWFAG+ I A + Y FP++
Sbjct: 491 GRWFAGRTIRAVAIPVANYNTMFPEA 516
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 171/411 (41%), Positives = 229/411 (55%), Gaps = 50/411 (12%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 117 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 173
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 174 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 226
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 227 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 286
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 287 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARL-- 341
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
A +PP Q + G L
Sbjct: 342 -------------------------------AEGTGLQIPPAAQQALQMS-GSLAFGAVA 369
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
+A + ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 370 ASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 429
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 430 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 480
>gi|432858816|ref|XP_004068953.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Oryzias latipes]
Length = 529
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 180/438 (41%), Positives = 250/438 (57%), Gaps = 43/438 (9%)
Query: 216 EKERESRDNDKESRRPKEKKEQVEPEVDP-----------ERDQRTVFAYQICLKADERD 264
E + D SRR + K V+ E P ERD RTVF Q+ + RD
Sbjct: 109 ESLNHTNDCLCLSRRWSKSKSPVKKEKSPIRMPNDNLTPEERDGRTVFCMQLAARIRPRD 168
Query: 265 VYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 324
+ EFFS GKVRDVR+I DRNSRRSKG+ Y+EF + SVP+AI L+GQ LLG P++V+ S
Sbjct: 169 LEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQAS 228
Query: 325 EAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQL 384
+AEKN + ++ G TGP RLYVG+LHFN+TED LR +FEPFG +E +QL
Sbjct: 229 QAEKNRAAAAAAANNLQRGLTGPM-----RLYVGSLHFNITEDMLRGIFEPFGRIENIQL 283
Query: 385 PLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT 442
+D ETG KG+GF+ F+ E A+ AL LNG E+ GR +KV VT+++ A +
Sbjct: 284 MMDSETGRSKGYGFITFSDAECAKKALEQLNG-FELAGRPMKVGHVTERT--DPSSAPSI 340
Query: 443 GDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAAS 502
D D+ E G+ L R LM +L G + PA AL + A +GA +
Sbjct: 341 LDNDELERSGIDLGTTGRLQLMARLAEG------TGLQIPPAAQQ-ALQMSGAIAIGAMA 393
Query: 503 AVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEE 562
AVS + P + V + G AL +P+ + + C L NMF+P +E
Sbjct: 394 AVSAAMNPSLN--VNMNSG----ALNLPSQP--------LATHCFQLSNMFNPSSENTFG 439
Query: 563 FDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMI 621
+++DI+ DV EC+K G + HI+V+K+SA G VY++ + +A +A ALHGR+F GKMI
Sbjct: 440 WEVDIQRDVIEECNKHGGVVHIYVDKNSAEGNVYVKCPSIPAAMSAVNALHGRFFGGKMI 499
Query: 622 TATFMVPQTYEAKFPDSI 639
TA ++ TY FP+S+
Sbjct: 500 TAAYVPLPTYHKLFPESV 517
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 176/412 (42%), Positives = 239/412 (58%), Gaps = 35/412 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRS+G
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SV +AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVRLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 418
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 419 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 467
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 468 NSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 519
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/417 (41%), Positives = 245/417 (58%), Gaps = 35/417 (8%)
Query: 226 KESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN 285
KE + + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRN
Sbjct: 106 KEKSPIRMPNDNLTPE---ERDGRTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRN 162
Query: 286 SRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT 345
SRRSKG+ Y+EF + SVP+AI L+GQ LLG P++V+ S+AEKN + ++ G T
Sbjct: 163 SRRSKGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANNLQRGLT 222
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLE 404
GP RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E
Sbjct: 223 GPM-----RLYVGSLHFNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAE 277
Query: 405 DARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALL 463
A+ AL LNG E+ GR +KV VT+++ A + D D+ E G+ L R L
Sbjct: 278 CAKKALEQLNG-FELAGRPMKVGHVTERT--DPSSAPSILDNDELERSGIDLGTTGRLQL 334
Query: 464 MQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQL 523
M +L G + PA AL + A +GA +AVS + P + V + G
Sbjct: 335 MARLAEG------TGLQIPPAAQQ-ALQMSGAIAIGAMAAVSAAMNPSL--NVNMNSG-- 383
Query: 524 GTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKH 583
AL +P+ + + C L NMF+P +E +++DI+ DV EC+K G + H
Sbjct: 384 --ALNLPSQP--------LATHCFQLSNMFNPSSENTFGWEVDIQRDVIEECNKHGGVVH 433
Query: 584 IFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
I+V+K+SA G VY++ + +A +A ALHGR+F GKMITA ++ TY FP+S+
Sbjct: 434 IYVDKNSAEGNVYVKCPSIPAAMSAVNALHGRFFGGKMITAAYVPLPTYHKLFPESV 490
>gi|395863336|ref|XP_003803852.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
gi|395863340|ref|XP_003803854.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
Length = 514
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 200/529 (37%), Positives = 277/529 (52%), Gaps = 60/529 (11%)
Query: 134 ERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIER 193
E + TD D+ E+S + G R R+D +R R + E +RSRDRE R
Sbjct: 12 EAPYKTDEDKLSSANGHGERSKKRGESKSRSRTDEPKRSRRK-----EGKRSRDRE---R 63
Query: 194 ERSRDREVIERE--------------RSRDRELKEREKERESRDNDKESRRPKEK----- 234
+RSR E R R R + + + D ++ P K
Sbjct: 64 KRSRSPERKRSRSKERRRSRSRSRDGRFRGRYTSPYSRPKFNSDIRGQTGLPLRKDKSPV 123
Query: 235 KEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY 294
+E ++ ERD RTVF Q+ + RD+ FFS GKVRDVR+I DRN+RRSKG+ Y
Sbjct: 124 REPIDNLTPEERDARTVFCMQLAARIRPRDLEAFFSTVGKVRDVRMISDRNARRSKGIAY 183
Query: 295 VEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARR 354
VEF DV SVP+AI L+GQ + G P++V+ S+AEKN + ++ G GP R
Sbjct: 184 VEFVDVSSVPLAIGLTGQRVFGVPILVRASQAEKNRAAAMAN--NLQKGRAGPM-----R 236
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NL 412
LYVG+LH N+TE LR +FEPFG +E +QL D ETG KG+GF+ F+ E A+ AL L
Sbjct: 237 LYVGSLHLNITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQL 296
Query: 413 NGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
NG LE+ GR +KV VT+ G A++ + D+ E G+ L M +L
Sbjct: 297 NG-LELAGRPMKVGHVTE--GTDASTASSFLNSDELERTGIDLGTAGGLQFMARLAEG-- 351
Query: 473 ATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV-PT 531
G + PA AL + + GA + S + L + + T L A V P
Sbjct: 352 ----TGLQIPPAAQQ-ALQMNSPLAFGATAEFSFRLDLLTRLSQQTQASDLAAAASVQPL 406
Query: 532 ASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA 591
A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+SA
Sbjct: 407 A-----------TQCFQLSNMFNPQTEEV-GWDTEIKDDVIEECNKHGGVIHIYVDKNSA 454
Query: 592 -GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 455 QGNVYVKCPSIAAAVAAVSALHGRWFAGKMITAAYVPLPTYHNLFPDSM 503
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 168/407 (41%), Positives = 234/407 (57%), Gaps = 53/407 (13%)
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
E++ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLI+ +RR KG+ Y+
Sbjct: 154 EELSPE---ERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIAYI 210
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF D SV +A+ LSGQ LLG P++V+ ++AEKN + NS TGP RL
Sbjct: 211 EFKDPESVTLALGLSGQKLLGVPIIVQHTQAEKNRM-GNSMPNLMPKNMTGPM-----RL 264
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLN 413
YVG+LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ F EDA+ AL LN
Sbjct: 265 YVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLN 324
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSA 473
G E+ GR +KV VT++ LQ G + D D+ + G+ L A R LM KL
Sbjct: 325 G-FELAGRPMKVGNVTERLDLQQQGPSIL-DSDELDRSGIDLGATGRLQLMFKLAEG--- 379
Query: 474 TTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTAS 533
AG V P + AL + T Q VP QV T S
Sbjct: 380 ---AGMQV-PQAAANALSIATG-----------------QPVVP----------QVQTNS 408
Query: 534 VPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-G 592
P + ++C +L NMFDP E+ + +D++I++DV EC+K G + H++V+K S G
Sbjct: 409 TP-----PIATQCFMLSNMFDPATESTQTWDVEIRDDVIEECNKHGGVLHVYVDKGSPQG 463
Query: 593 FVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
VY++ + +A A+ +LHGRWFAG++ITA ++ Y + FPD++
Sbjct: 464 NVYVKCPSIATAVASVNSLHGRWFAGRVITAAYVPLLNYHSLFPDAM 510
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 234/422 (55%), Gaps = 58/422 (13%)
Query: 224 NDKESRRPKEKKEQVEP-EVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
N R P E+ P E+ PE RD RTVF Q+ + RD+ EFFS GKVRDVRLI
Sbjct: 212 NSPRRRSPANGAERTTPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLI 271
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
++R KG+ Y+EF D SV +A+ LSGQ LLG P+MV+ ++AEKN +Q N++ A
Sbjct: 272 TCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQ-NATPAFQP 330
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
TGP RLYVG+LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ +
Sbjct: 331 KSHTGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITY 385
Query: 401 ARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNAR 458
+DA+ AL LNG E+ GR +KV VT++ L NTT D D+ + G+ L A
Sbjct: 386 HNADDAKKALEQLNG-FELAGRLMKVGNVTER-----LDMNTTSLDTDEMDRTGIDLGAT 439
Query: 459 SRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT 518
R LM KL AG AV A + L P PL Q V
Sbjct: 440 GRLQLMFKLAEG------AGLAVPQAAANALLATAPQP------------APLQQQEV-- 479
Query: 519 HPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKF 578
P+ + ++C +L NMFDP+ ET +D++I++DV EC+K
Sbjct: 480 ----------APS----------IATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKH 519
Query: 579 GKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
G + HI V+ S G VY++ +T +A A ALHGRWFAG++ITA ++ Y FPD
Sbjct: 520 GGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAYLPVINYHTMFPD 579
Query: 638 SI 639
SI
Sbjct: 580 SI 581
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 231/422 (54%), Gaps = 58/422 (13%)
Query: 224 NDKESRRPKEKKEQVEP-EVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
N R P E+ P E+ PE RD RTVF Q+ + RD+ EFFS GKVRDVRLI
Sbjct: 224 NSPRRRSPANGAERTTPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLI 283
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
++R KG+ Y+EF D SV +A+ LSGQ LLG P+MV+ ++AEKN +Q N++ A
Sbjct: 284 TCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQ-NATPAFQP 342
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
TGP RLYVG+LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ +
Sbjct: 343 KSHTGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITY 397
Query: 401 ARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNAR 458
+DA+ AL LNG E+ GR +KV VT++ L NTT D D+ + G+ L A
Sbjct: 398 HNADDAKKALEQLNG-FELAGRLMKVGNVTER-----LDMNTTSLDTDEMDRTGIDLGAT 451
Query: 459 SRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT 518
R LM KL GA AV + T P
Sbjct: 452 GRLQLMFKLAE-----------------------------GAGLAVPQAAANALLATAP- 481
Query: 519 HPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKF 578
P L P+ + ++C +L NMFDP+ ET +D++I++DV EC+K
Sbjct: 482 QPAPLQQQEVAPS----------IATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKH 531
Query: 579 GKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
G + HI V+ S G VY++ +T +A A ALHGRWFAG++ITA ++ Y FPD
Sbjct: 532 GGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAYLPVINYHTMFPD 591
Query: 638 SI 639
SI
Sbjct: 592 SI 593
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 188/545 (34%), Positives = 276/545 (50%), Gaps = 84/545 (15%)
Query: 107 ERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRS 166
E+ + R GR+R+++R R +DR + RDR KD+ KE++ R +S
Sbjct: 40 EKASKKHRSGSPGRNRDKERRRSKDRSKSRSPARRDRSKDRSKEKD----------RGKS 89
Query: 167 DRDERERSRDREVIERERSRDR----------EVIERERSRDREVIERERSRDRELKERE 216
D RE V+E+ RSRDR + R RSRD R K
Sbjct: 90 DHHRRE-----VVVEKRRSRDRVDHRRRSRERDYRRRSRSRDGGRGMGRGRRSMSPKPYR 144
Query: 217 KERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
R P E+ Q +RD RTVF Q+ + RD+ EFFS GKVR
Sbjct: 145 GRGRGGSGYYRDRSPLEEMSQ------EDRDARTVFCMQLSQRIHARDLEEFFSSVGKVR 198
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSS 336
DVRLI ++R KG+ Y+EF D SV +A+ LSGQ LLG P+ V+ ++AEKN + S
Sbjct: 199 DVRLITCNKTKRFKGIAYIEFKDPESVALALGLSGQKLLGIPISVQHTQAEKNRMASQPP 258
Query: 337 IAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGF 395
+A G RLYVG+LHFN+TED L +FEPFG ++ +QL +D +TG KG+
Sbjct: 259 VAPPKN------PSGPMRLYVGSLHFNITEDMLNGIFEPFGKIDNIQLIMDADTGRSKGY 312
Query: 396 GFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLS 454
GF+ F +DA+ AL LNG E+ GR +KV VT++ D+ + + D D+ + G+
Sbjct: 313 GFITFHNADDAKKALEQLNG-FELAGRPMKVGNVTER---LDVTTHASLDTDEMDRSGIE 368
Query: 455 LNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQG 514
L A R LM KL G+ + +A + + P+P P++ + PP+
Sbjct: 369 LGATGRLQLMFKL-AEGAGLAVPRAAADALLATAPQPVPQQPIMQS--------PPIA-- 417
Query: 515 TVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGE 574
++C LL NMFDP ET +D++I++DV E
Sbjct: 418 -----------------------------TQCFLLSNMFDPATETNPNWDLEIQDDVIEE 448
Query: 575 CSKFGKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
C+K G ++H++V+K S +G VY++ + +A A ALHGRWFAG++I A ++ Y
Sbjct: 449 CNKHGGVQHVYVDKQSPSGNVYVKCPSIATAVLAVNALHGRWFAGRVIGAAYVPLINYYN 508
Query: 634 KFPDS 638
FP++
Sbjct: 509 LFPEA 513
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 237/421 (56%), Gaps = 53/421 (12%)
Query: 222 RDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
R+ R E++ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLI
Sbjct: 119 RNRSPLGLRSNSPVEELSPE---ERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLI 175
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
+ +RR KG+ Y+EF D SV +A+ LSGQ LLG P++V+ ++AEKN + NS
Sbjct: 176 VCNKTRRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIVQHTQAEKNRM-GNSMPNLMP 234
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
TGP RLYVG+LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ F
Sbjct: 235 KNMTGPM-----RLYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAF 289
Query: 401 ARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARS 459
EDA+ AL LNG E+ GR +KV VT++ LQ G + D D+ + G+ L A
Sbjct: 290 RNCEDAKKALEQLNG-FELAGRPMKVGNVTERLDLQQQGPSIL-DSDELDRSGIDLGATG 347
Query: 460 RALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTH 519
R LM KL AG V P + AL + T Q VP
Sbjct: 348 RLQLMFKLAEG------AGMQV-PQAAANALSIATG-----------------QPVVP-- 381
Query: 520 PGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFG 579
QV T S P + ++C +L NMFDP E+ + +D++I++DV EC+K G
Sbjct: 382 --------QVQTNSTP-----PIATQCFMLSNMFDPATESTQTWDVEIRDDVIEECNKHG 428
Query: 580 KLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
+ H++V+K S G VY++ + +A A+ +LHGRWFAG++ITA ++ Y + FPD+
Sbjct: 429 GVLHVYVDKGSPQGNVYVKCPSIATAVASVNSLHGRWFAGRVITAAYVPLLNYHSLFPDA 488
Query: 639 I 639
+
Sbjct: 489 M 489
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 230/422 (54%), Gaps = 58/422 (13%)
Query: 224 NDKESRRPKEKKEQVEP-EVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
N R P ++ P E+ PE RD RTVF Q+ + RD+ EFFS GKVRDVRLI
Sbjct: 206 NSPRRRSPANGADRTPPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLI 265
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
++R KG+ Y+EF D SV +A+ LSGQ LLG P+MV+ ++AEKN +Q N++ A
Sbjct: 266 TCNKTKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQ-NAAPAFQP 324
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
TGP RLYVG+LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ +
Sbjct: 325 KSHTGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITY 379
Query: 401 ARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNAR 458
+DA+ AL LNG E+ GR +KV VT++ L NTT D D+ + G+ L A
Sbjct: 380 HNADDAKKALEQLNG-FELAGRLMKVGNVTER-----LDMNTTSLDTDEMDRTGIDLGAT 433
Query: 459 SRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT 518
R LM KL +A P P APL +A S
Sbjct: 434 GRLQLMFKL---AEGAGLAVPQAAANALLATAPQP-APLQQQEAAPS------------- 476
Query: 519 HPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKF 578
+ ++C +L NMFDP+ ET +D++IK+DV EC+K
Sbjct: 477 -----------------------IATQCFILSNMFDPRTETNPTWDVEIKDDVLEECAKH 513
Query: 579 GKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
G + HI V+ S G VY++ +T +A A ALHGRWFAG++ITA ++ Y FPD
Sbjct: 514 GGVLHIHVDTISPTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAYVPVINYHTMFPD 573
Query: 638 SI 639
S+
Sbjct: 574 SM 575
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 230/422 (54%), Gaps = 58/422 (13%)
Query: 224 NDKESRRPKEKKEQVEP-EVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
N R P ++ P E+ PE RD RTVF Q+ + RD+ EFFS GKVRDVRLI
Sbjct: 209 NSPRRRSPANGADRTPPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLI 268
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
++R KG+ Y+EF D SV +A+ LSGQ LLG P+MV+ ++AEKN +Q N++ A
Sbjct: 269 TCNKTKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQ-NAAPAFQP 327
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
TGP RLYVG+LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ +
Sbjct: 328 KSHTGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITY 382
Query: 401 ARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNAR 458
+DA+ AL LNG E+ GR +KV VT++ L NTT D D+ + G+ L A
Sbjct: 383 HNADDAKKALEQLNG-FELAGRLMKVGNVTER-----LDMNTTSLDTDEMDRTGIDLGAT 436
Query: 459 SRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT 518
R LM KL +A P P AP+ +A S
Sbjct: 437 GRLQLMFKL---AEGAGLAVPQAAANALLATAPQP-APMQQQEAAPS------------- 479
Query: 519 HPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKF 578
+ ++C +L NMFDP+ ET +D++I++DV EC+K
Sbjct: 480 -----------------------IATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKH 516
Query: 579 GKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
G + HI V+ S G VY++ +T +A A ALHGRWFAG++ITA ++ Y FPD
Sbjct: 517 GGVLHIHVDTISPTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAYVPVINYHTMFPD 576
Query: 638 SI 639
SI
Sbjct: 577 SI 578
>gi|260834973|ref|XP_002612484.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
gi|229297861|gb|EEN68493.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
Length = 466
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 180/457 (39%), Positives = 238/457 (52%), Gaps = 87/457 (19%)
Query: 235 KEQVEPEVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K++ P++ PE RDQRTVF Q+ + +D+ +FFS GKVR+VRLI DRNSRR KG+
Sbjct: 32 KDESGPQLSPEERDQRTVFVMQLSQRVRPKDLEDFFSSVGKVREVRLIADRNSRRHKGIA 91
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y EF D VPMAI L+ Q LLG P++V+ S+AEKN +NS G +GP
Sbjct: 92 YCEFTDASCVPMAIGLTNQKLLGVPIIVQASQAEKNRAAANSQ--NLQKGSSGP-----M 144
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-N 411
RLYVG+LHFN+TED LR +FEPFG ++ +QL D ETG KG+GF+ F E A+ AL
Sbjct: 145 RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLMKDSETGRSKGYGFITFHDAECAKKALEQ 204
Query: 412 LNGQLEIVGRAIKVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNARSRALLMQKLDRS 470
LNG E+ GR +KV VT++S D GA T+ D D+ E G+ L+ R LM KL
Sbjct: 205 LNG-FELAGRPMKVGHVTERS---DAGAATSFLDSDELERTGIELSTTGRLQLMAKLAE- 259
Query: 471 GSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVP 530
G+ + PA +AL +P A L G +PT PG G + P
Sbjct: 260 GTGFEM------PAAAQSALNMPMASLTG----------------LPTLPGA-GPGVAAP 296
Query: 531 TASV----------PIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGK 580
+ P + C L NMFD K E +DM+I+ DV EC+K G
Sbjct: 297 AGVMPAAGQQQPPPPPVPIPAYATPCFQLSNMFDIKMENAPNWDMEIRNDVVEECTKHGG 356
Query: 581 LKHIFVEKDS--------------------------------------AGFVYLRFENTQ 602
+ H+FV+K+S G VY++ N Q
Sbjct: 357 VLHVFVDKNSDNVSHDTHSHFVFLSLYQQMGQMPEFTAQSFHHTLFCLQGNVYVKCPNIQ 416
Query: 603 SAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+A A ALHGRWFAGKMI A ++ Y A FP++I
Sbjct: 417 TAAACVNALHGRWFAGKMIQANYVPIVNYHALFPEAI 453
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 167/417 (40%), Positives = 241/417 (57%), Gaps = 36/417 (8%)
Query: 226 KESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN 285
KE ++ + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRN
Sbjct: 130 KEKSPVRQPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRN 186
Query: 286 SRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT 345
SRRSKG+ Y+EF + SVP+AI LSGQ LLG P++V+ S+ + + N + A A+
Sbjct: 187 SRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQV---MAEKNRAAAMANNLQK 243
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLE 404
G + G RLYVG+LHFN+TE+ LR +FEPFG +E +QL +D ETG KG+GF+ F+ E
Sbjct: 244 G--NAGPMRLYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTE 301
Query: 405 DARNALN-LNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALL 463
A+ AL+ LNG E+ GR +KV VT+++ A++ D D+ E G+ L R L
Sbjct: 302 CAKKALDQLNG-FELAGRPMKVGHVTERTDAST--ASSFLDSDELERTGIDLGTTGRLQL 358
Query: 464 MQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQL 523
M +L G+ I +A S A+ + + AA + + +P+ P
Sbjct: 359 MARLAE-GTGLQIPPAAQQALQMSGAIAIGAMAAVSAAMNPAMNMNMNTAMNLPSQP--- 414
Query: 524 GTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKH 583
+ + C L NMF+P++E ++D+DI+ DV EC+K G + H
Sbjct: 415 ------------------LATHCFQLSNMFNPQSEDNPDWDVDIQHDVIEECNKHGGVVH 456
Query: 584 IFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
I+V+K+S G VY++ + +A AA ALHGR+FAGKMITA ++ TY FPDS+
Sbjct: 457 IYVDKNSTEGNVYVKCPSIPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPDSV 513
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 231/422 (54%), Gaps = 58/422 (13%)
Query: 224 NDKESRRPKEKKEQVEP-EVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
N R P ++ P E+ PE RD RTVF Q+ + RD+ EFFS GKVRDVRLI
Sbjct: 210 NSPRRRSPPNGADRTTPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLI 269
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
++R KG+ Y+EF D SV +A+ LSGQ LLG P+MV+ ++AEKN +Q N++ A
Sbjct: 270 TCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQ-NAAPAFQP 328
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
TGP RLYVG+LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ +
Sbjct: 329 KSHTGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITY 383
Query: 401 ARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNAR 458
+DA+ AL LNG E+ GR +KV VT++ L NTT D D+ + G+ L A
Sbjct: 384 HNADDAKKALEQLNG-FELAGRLMKVGNVTER-----LDMNTTSLDTDEMDRTGIDLGAT 437
Query: 459 SRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT 518
R LM KL GA AV + T P
Sbjct: 438 GRLQLMFKLAE-----------------------------GAGLAVPQAAANALLATAP- 467
Query: 519 HPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKF 578
P L P+ + ++C +L NMFDP+ ET +D++I++DV EC+K
Sbjct: 468 QPAPLQQQEVAPS----------IATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKH 517
Query: 579 GKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
G + HI V+ S G VY++ +T +A A ALHGRWFAG++ITA ++ Y FPD
Sbjct: 518 GGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAYVPVINYHTMFPD 577
Query: 638 SI 639
SI
Sbjct: 578 SI 579
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 161/404 (39%), Positives = 224/404 (55%), Gaps = 57/404 (14%)
Query: 241 EVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
E+ PE RD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ Y+EF D
Sbjct: 262 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFED 321
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
SV +A+ LSGQ LLG P+MV+ ++AEKN +QS A G RLYVG+
Sbjct: 322 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQS------APPPFQPKLHTGPMRLYVGS 375
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLE 417
LHFN+TED LR +FEPFG ++++QL +D ETG KG+GF+ + +DA+ AL LNG E
Sbjct: 376 LHFNITEDMLRGIFEPFGKIDVIQLIMDNETGRSKGYGFITYHNADDAKKALEQLNG-FE 434
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNARSRALLMQKLDRSGSATTI 476
+ GR +KV VT++ L NT+ D D+ + G+ L A R LM KL
Sbjct: 435 LAGRPMKVGNVTER-----LDMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAE------- 482
Query: 477 AGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPI 536
GA AV + T P P + Q P+
Sbjct: 483 ----------------------GAGLAVPQAAANALLATAP-QPAPMQHEQQTPS----- 514
Query: 537 FDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVY 595
+ ++C +L NMFDP+ ET +D ++++DV EC+K G + HI V+ SA G VY
Sbjct: 515 -----IATQCFILSNMFDPRTETNPTWDTEVRDDVLEECTKHGGVLHIHVDTVSATGTVY 569
Query: 596 LRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
++ +T +A A +LHGRWFAG++ITA ++ Y + FPD+I
Sbjct: 570 VKCPSTATAVLAVNSLHGRWFAGRVITAAYVPLINYHSMFPDAI 613
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/408 (40%), Positives = 228/408 (55%), Gaps = 52/408 (12%)
Query: 238 VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+ YVEF
Sbjct: 189 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEF 245
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASG---GGTGPYSGGARR 354
DV SVP+A+ L+GQ L G P++V+P++AE+N + ++ +S G GP R
Sbjct: 246 LDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSSSTLQRGNVGPM-----R 300
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NL 412
LYVG+LHFN+TED L+ +FEPFG ++ ++L D ET KG+GF+ F EDA+ AL L
Sbjct: 301 LYVGSLHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQL 360
Query: 413 NGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
NG E+ GR +KV VT+++ + A + D ++ + G+ L A R LM KL G+
Sbjct: 361 NG-FELAGRPMKVGHVTERTDVSQ--APSFLDSEELDRSGIDLGATGRLQLMAKL-AEGT 416
Query: 473 ATTIAGSAVTPA-VNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPT 531
I +AV +N+T LP P A PT
Sbjct: 417 GFQIPQAAVNALQMNTTGLP-----------------------GQPQAAAVAAAAAAAPT 453
Query: 532 ASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA 591
+ ++C LL NMFDP ET +D +I+ DV EC K G H++V++ S
Sbjct: 454 ----------IATQCFLLSNMFDPLTETNPSWDEEIRRDVIEECRKHGGALHVYVDRASP 503
Query: 592 -GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
G VY++ SA A+ ALHGRWFAG++ITA ++ +Y FPDS
Sbjct: 504 EGHVYVKCPTIASAVASVNALHGRWFAGRIITAAYVPVMSYHTLFPDS 551
>gi|395863338|ref|XP_003803853.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
gi|395863342|ref|XP_003803855.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
Length = 487
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 197/506 (38%), Positives = 270/506 (53%), Gaps = 44/506 (8%)
Query: 146 DKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERE 205
+ K+R +S E RS R E +RSRDRE R+RSR E R R
Sbjct: 3 NMSKKRGESKSRSRTDEPKRSRRKEGKRSRDRE---RKRSRSPERKRSRSKERRRSRSRS 59
Query: 206 ---RSRDRELKEREKERESRDNDKESRRPKEK-----KEQVEPEVDPERDQRTVFAYQIC 257
R R R + + + D ++ P K +E ++ ERD RTVF Q+
Sbjct: 60 RDGRFRGRYTSPYSRPKFNSDIRGQTGLPLRKDKSPVREPIDNLTPEERDARTVFCMQLA 119
Query: 258 LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQ 317
+ RD+ FFS GKVRDVR+I DRN+RRSKG+ YVEF DV SVP+AI L+GQ + G
Sbjct: 120 ARIRPRDLEAFFSTVGKVRDVRMISDRNARRSKGIAYVEFVDVSSVPLAIGLTGQRVFGV 179
Query: 318 PVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFG 377
P++V+ S+AEKN + ++ G GP RLYVG+LH N+TE LR +FEPFG
Sbjct: 180 PILVRASQAEKNRAAAMAN--NLQKGRAGPM-----RLYVGSLHLNITEAMLRGIFEPFG 232
Query: 378 TVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQ 435
+E +QL D ETG KG+GF+ F+ E A+ AL LNG LE+ GR +KV VT+ G
Sbjct: 233 RLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQLNG-LELAGRPMKVGHVTE--GTD 289
Query: 436 DLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTA 495
A++ + D+ E G+ L M +L G + PA AL + +
Sbjct: 290 ASTASSFLNSDELERTGIDLGTAGGLQFMARLAEG------TGLQIPPAAQQ-ALQMNSP 342
Query: 496 PLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV-PTASVPIFDTIGVPSECLLLKNMFD 554
GA + S + L + + T L A V P A ++C L NMF+
Sbjct: 343 LAFGATAEFSFRLDLLTRLSQQTQASDLAAAASVQPLA-----------TQCFQLSNMFN 391
Query: 555 PKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHG 613
P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +A AA ALHG
Sbjct: 392 PQTEEV-GWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAVAAVSALHG 450
Query: 614 RWFAGKMITATFMVPQTYEAKFPDSI 639
RWFAGKMITA ++ TY FPDS+
Sbjct: 451 RWFAGKMITAAYVPLPTYHNLFPDSM 476
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 240/443 (54%), Gaps = 57/443 (12%)
Query: 205 ERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPE--VDPE-RDQRTVFAYQICLKAD 261
+RSR R + K + R+P +V P + PE RD RTVF Q+
Sbjct: 93 KRSRTRSPIKLPKYGPPLPPPRYGRKPSPLASKVPPASMLTPEERDARTVFCMQLSKTIR 152
Query: 262 ERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMV 321
RD+ EFFS GKVRDVR+I +RR KG+ Y+EF D SVP+A+ L+GQ LLG P++V
Sbjct: 153 ARDLEEFFSSVGKVRDVRMITCNKTRRFKGIAYIEFKDPESVPLAMGLNGQKLLGVPIVV 212
Query: 322 KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVEL 381
+P++AEKN + +NS GP +LYVG+LH+N+TE+ LR +FEPFG V+
Sbjct: 213 QPTQAEKNRM-ANSMPNMVQRTHYGPM-----KLYVGSLHYNITEEMLRGIFEPFGHVDN 266
Query: 382 VQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGA 439
+QL +D ETG KG+GF+ + EDA+ AL +LNG EI GR +KV VT+ + D
Sbjct: 267 IQLMMDTETGRSKGYGFLTYRNAEDAKKALEHLNG-FEIAGRPMKVGHVTENHSVYD--- 322
Query: 440 NTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLG 499
T + D+ + G L A R LM KL T P+P A
Sbjct: 323 KTAFEVDELDRAGYDLGATGRLQLMYKL-----------------AEGTGFPIPQA---- 361
Query: 500 AASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNE- 558
AA+A+ Q+ + +Q A+ + T + ++C LL NMFDP E
Sbjct: 362 AANAL-----------------QVASGVQAAPAAPTVQVTPPIATQCFLLANMFDPNKED 404
Query: 559 --TYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRW 615
+ ++ +I++DV EC+K G + H++V+K S G VY++ ++A A+ ALHGRW
Sbjct: 405 VDSNTTWETEIRDDVIEECNKHGGVLHVYVDKASPQGNVYVKCTTIETALASVAALHGRW 464
Query: 616 FAGKMITATFMVPQTYEAKFPDS 638
F G++ITA ++ Y FP++
Sbjct: 465 FGGRVITAAYVPVTNYHNLFPEA 487
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 228/400 (57%), Gaps = 51/400 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI +RR KG+ YVEF + SVP
Sbjct: 5 ERDARTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLITCNKTRRFKGLCYVEFAEPESVP 64
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+AIAL+GQ L G P++V+P++AEKN + + S++ S GP G RLYVG+LHFN+
Sbjct: 65 LAIALTGQRLCGVPIVVQPTQAEKNRL-AGSNMPAMSSFNKGP--NGPMRLYVGSLHFNI 121
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRA 422
TED LR +FEPFG +E +QL +D ETG KG+GF+ F EDA+ A+ LNG E+ GR
Sbjct: 122 TEDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKAMEQLNG-FELAGRP 180
Query: 423 IKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVT 482
+K++ VT+ G +T D D+ + G+ L A R LM KL + G+ I
Sbjct: 181 MKINHVTEHFT----GNHTYLDSDEMDRAGIDLGATGRLQLMAKLAQ-GTGLEI------ 229
Query: 483 PAVNSTALPLPTAPLLGAASA--VSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTI 540
PA +AL L + A V+++ PP
Sbjct: 230 PAAAQSALNLQASIQAAQQQALPVASVAPP------------------------------ 259
Query: 541 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFE 599
+ ++C +L NMFD +ET+ + +I +DV EC+K G + HI+V+K S G VY++
Sbjct: 260 -IATQCFMLSNMFDSSSETHPLWHQEICDDVMDECNKHGGVLHIYVDKASPQGNVYVKCP 318
Query: 600 NTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+ A A ALHGRWFAG++ITA ++ Y + FPDSI
Sbjct: 319 SVTVAVNAVNALHGRWFAGRIITAAYVPLINYHSLFPDSI 358
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 160/404 (39%), Positives = 221/404 (54%), Gaps = 57/404 (14%)
Query: 241 EVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
E+ PE RD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ Y+EF D
Sbjct: 251 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFED 310
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
SV +A+ LSGQ LLG P+MV+ ++AEKN +QS + TGP RLYVG+
Sbjct: 311 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQS-APPPFQPKAHTGPM-----RLYVGS 364
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLE 417
LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ + +DA+ AL LNG E
Sbjct: 365 LHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FE 423
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNARSRALLMQKLDRSGSATTI 476
+ GR +KV VT++ L NT+ D D+ + G+ L A R LM KL
Sbjct: 424 LAGRPMKVGNVTER-----LDMNTSSLDTDEMDRSGIDLGATGRLQLMFKL--------- 469
Query: 477 AGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPI 536
L +P A + P L Q P+
Sbjct: 470 --------AEGAGLAVPQAAANALLATAPQPAPVLQQQQTPS------------------ 503
Query: 537 FDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS-AGFVY 595
+ ++C +L NMFDP+ ET + D+++DV EC+K G + HI V+ S G VY
Sbjct: 504 -----IATQCFILSNMFDPRTETNPTWATDVRDDVLDECAKHGGVLHIHVDTVSPTGTVY 558
Query: 596 LRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
++ +T +A A ALHGRWFAG++ITA ++ Y + FPD+I
Sbjct: 559 VKCPSTTTAVLAVNALHGRWFAGRVITAAYVPVINYHSMFPDAI 602
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/411 (40%), Positives = 228/411 (55%), Gaps = 60/411 (14%)
Query: 238 VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+ YVEF
Sbjct: 130 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEF 186
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN-LVQSNSSIAGASG--GGTGPYSGGARR 354
DV SVP+A+ L+GQ L G P++V+P++AE+N N+S + ++ G GP R
Sbjct: 187 QDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPM-----R 241
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NL 412
LYVG+LHFN+TE+ L+ +FEPFG ++ ++L D ET KG+GF+ F EDA+ AL L
Sbjct: 242 LYVGSLHFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQL 301
Query: 413 NGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
NG E+ GR +KV VT+++ + A + D ++ + G+ L A R LM KL
Sbjct: 302 NG-FELAGRPMKVGHVTERTDVSQ--APSFLDSEELDRSGIDLGATGRLQLMAKL----- 353
Query: 473 ATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQ----LGTALQ 528
T +P A AV+ L Q PGQ A
Sbjct: 354 ------------AEGTGFQIPQA-------AVNAL-----QMNPAVLPGQPQAAAVAAAA 389
Query: 529 VPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
PT + ++C LL NMFDP ET +D +I+ DV EC K G H++V++
Sbjct: 390 APT----------IATQCFLLSNMFDPLTETNPSWDEEIRRDVIEECRKHGGALHVYVDR 439
Query: 589 DSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
S G VY++ SA A+ ALHGRWFAG++ITA ++ +Y FPDS
Sbjct: 440 ASPEGHVYVKCPTIASAVASVNALHGRWFAGRIITAAYVPVMSYHTLFPDS 490
>gi|145349966|ref|XP_001419396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579627|gb|ABO97689.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 516
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 167/409 (40%), Positives = 229/409 (55%), Gaps = 45/409 (11%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
+RD RTVF + K DER +++FFS+ GKV DVR+I DRN+ +SKG+ YVEF D +
Sbjct: 131 DRDTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNTPKSKGMAYVEFADKKFIH 190
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLV----QSNSSIAGASGGGTGPY--SGGARRLYVG 358
A+ L+GQ L GQ + VK SEAEKN+ Q+ GAS G PY S G +L VG
Sbjct: 191 PALELTGQELNGQAIAVKTSEAEKNIAWEAEQAQKKKLGASYGQGVPYIASAGPCKLRVG 250
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFG--FVQFARLEDARNALN-LNG 414
LH ++ED ++ VFEPFG ++ + + D+ G F FVQF + A AL+ LNG
Sbjct: 251 GLHLGLSEDDVKAVFEPFGELDFISMIKDDDPGAAGKFASAFVQFKLTQHAMLALSQLNG 310
Query: 415 QLEIVGRAIKVSAVTD--QSGLQDLGANTTGDFDDDEG-GGLSLNARSRALLMQKLDRSG 471
LE+VG I+VS + Q+ + A + DEG GGL +++R RA LM +L +G
Sbjct: 311 -LELVGIPIRVSIASQGVQAAASTMAAPVESLGELDEGSGGLRMDSRGRAALMARL--AG 367
Query: 472 SATTI-AGSAVTPAVNSTALPL---PTAPLLGAASAVSTLVPPLVQGTV-PTHPGQLGTA 526
I G + P ST LP P+ A+ P+ QG + P P
Sbjct: 368 QDKEIEKGFTIDP---STGLPTTADAVKPIDVPGEALPLAAQPITQGVLGPGSP------ 418
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFV 586
+P+ C+LLKN+F+ ET E+ +DI EDV+GEC KFG++ H FV
Sbjct: 419 ---------------IPTPCILLKNLFNAAEETDPEWWLDIAEDVKGECEKFGEITHAFV 463
Query: 587 EKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+KDS GFVYL+F +T S+ AQ+ALH RWFAG+ I A F + Y+ F
Sbjct: 464 DKDSQGFVYLKFVDTASSTRAQQALHARWFAGRKIAAEFQFAEVYDGHF 512
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 230/407 (56%), Gaps = 52/407 (12%)
Query: 238 VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+ YVEF
Sbjct: 142 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEF 198
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN-LVQSNSSIAGASG--GGTGPYSGGARR 354
DV SVP+A+ L+GQ L G P++V+P++AE+N N+S + ++ G GP R
Sbjct: 199 QDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPM-----R 253
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NL 412
LYVG+LHFN+TE+ L+ +FEPFG ++ ++L D ET KG+GF+ F EDA+ AL L
Sbjct: 254 LYVGSLHFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQL 313
Query: 413 NGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
NG E+ GR +KV VT+++ + A + D ++ + G+ L A R LM KL G+
Sbjct: 314 NG-FELAGRPMKVGHVTERTDVSQ--APSFLDSEELDRSGIDLGATGRLQLMAKLAE-GT 369
Query: 473 ATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTA 532
I +AV A+ LP P A +A + PT
Sbjct: 370 GFQIPQAAVN-ALQMNPAVLPGQPQAAAVAAAAA----------PT-------------- 404
Query: 533 SVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA- 591
+ ++C LL NMFDP ET +D +I+ DV EC K G H++V++ S
Sbjct: 405 ---------IATQCFLLSNMFDPLTETNPSWDEEIRRDVIEECRKHGGALHVYVDRASPE 455
Query: 592 GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
G VY++ SA A+ ALHGRWFAG++ITA ++ +Y FPDS
Sbjct: 456 GHVYVKCPTIASAVASVNALHGRWFAGRIITAAYVPVMSYHTLFPDS 502
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 221/397 (55%), Gaps = 58/397 (14%)
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
P + +RD+RTVF Q+ + R+ FFS+AG+VR+ ++I DRNSR+SKG GYVEFYD
Sbjct: 115 PVPEEDRDRRTVFVTQLAARLTTREFDAFFSQAGRVREAKIITDRNSRKSKGCGYVEFYD 174
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
SV A+ALSGQ LLG PV+V+ SEAEKN + + ++ A G T P +RLY+G+
Sbjct: 175 ETSVQNALALSGQKLLGIPVLVQLSEAEKNRL-AMAAQRNAMGVTTEPLY---QRLYIGS 230
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
LHF++TE+ +RQ+FEPFG ++ V L D ETG KGFGF+Q+ DA+ AL E+
Sbjct: 231 LHFSLTENDVRQIFEPFGPLDFVNLHKDPETGRSKGFGFIQYKNANDAKQALEKMNGFEL 290
Query: 419 VGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GR +KV V+++SG +T DD+E GL+LN+ SRA LM KL
Sbjct: 291 AGRNLKVGLVSEKSGT----TMSTFGLDDEETEGLALNSLSRAELMAKL----------- 335
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFD 538
A NS AP+L +PTAS
Sbjct: 336 -AARDPQNSPPSRHAPAPVLKP---------------------------NIPTAS----- 362
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRF 598
+ ++L NMF+P ET ++ D++ D++ EC K+G+++HI V DS G V+L+F
Sbjct: 363 -----TRYVMLNNMFNPNEETDPDWVSDLEADIKIECEKYGRVEHIKVNSDSMGEVFLKF 417
Query: 599 ENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+ SA A AL+GRWF GK ITA + Y A
Sbjct: 418 DRVGSAEKAISALNGRWFGGKQITAACISDAIYNANI 454
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 168/389 (43%), Positives = 227/389 (58%), Gaps = 32/389 (8%)
Query: 255 QICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ YVEF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 315 LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFE 374
LG P++V+ S+AEKN A A S G RLYVG+LHFN+TED LR +FE
Sbjct: 62 LGVPIIVQASQAEKNR-------AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFE 114
Query: 375 PFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQS 432
PFG +E +QL +D ETG KG+GF+ F+ E A+ AL LNG E+ GR +KV VT+++
Sbjct: 115 PFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELTGRPMKVGHVTERT 173
Query: 433 GLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
A++ D D+ E G+ L R LM +L G + PA AL +
Sbjct: 174 DASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAEG------TGLQIPPAAQQ-ALQM 224
Query: 493 PTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV-PTASVPIFDTIGVPSECLLLKN 551
+ GA + S ++ + + T L A V P A ++C L N
Sbjct: 225 SGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLA-----------TQCFQLSN 273
Query: 552 MFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRA 610
MF+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +A AA A
Sbjct: 274 MFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNA 333
Query: 611 LHGRWFAGKMITATFMVPQTYEAKFPDSI 639
LHGRWFAGKMITA ++ TY FPDS+
Sbjct: 334 LHGRWFAGKMITAAYVPLPTYHNLFPDSM 362
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 168/389 (43%), Positives = 227/389 (58%), Gaps = 32/389 (8%)
Query: 255 QICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ YVEF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 315 LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFE 374
LG P++V+ S+AEKN A A S G RLYVG+LHFN+TED LR +FE
Sbjct: 62 LGVPIIVQASQAEKNR-------AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFE 114
Query: 375 PFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQS 432
PFG +E +QL +D ETG KG+GF+ F+ E A+ AL LNG E+ GR +KV VT+++
Sbjct: 115 PFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT 173
Query: 433 GLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
A++ D D+ E G+ L R LM +L G + PA AL +
Sbjct: 174 DASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAEG------TGLQIPPAAQQ-ALQM 224
Query: 493 PTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV-PTASVPIFDTIGVPSECLLLKN 551
+ GA + S ++ + + T L A V P A ++C L N
Sbjct: 225 SGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLA-----------TQCFQLSN 273
Query: 552 MFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRA 610
MF+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +A AA A
Sbjct: 274 MFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNA 333
Query: 611 LHGRWFAGKMITATFMVPQTYEAKFPDSI 639
LHGRWFAGKMITA ++ TY FPDS+
Sbjct: 334 LHGRWFAGKMITAAYVPLPTYHNLFPDSM 362
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 168/389 (43%), Positives = 227/389 (58%), Gaps = 32/389 (8%)
Query: 255 QICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ YVEF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 315 LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFE 374
LG P++V+ S+AEKN A A S G RLYVG+LHFN+TED LR +FE
Sbjct: 62 LGVPIVVQASQAEKNR-------AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFE 114
Query: 375 PFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQS 432
PFG +E +QL +D ETG KG+GF+ F+ E A+ AL LNG E+ GR +KV VT+++
Sbjct: 115 PFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT 173
Query: 433 GLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
A++ D D+ E G+ L R LM +L G + PA AL +
Sbjct: 174 DASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAEG------TGLQIPPAAQQ-ALQM 224
Query: 493 PTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV-PTASVPIFDTIGVPSECLLLKN 551
+ GA + S ++ + + T L A V P A ++C L N
Sbjct: 225 SGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLA-----------TQCFQLSN 273
Query: 552 MFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRA 610
MF+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +A AA A
Sbjct: 274 MFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNA 333
Query: 611 LHGRWFAGKMITATFMVPQTYEAKFPDSI 639
LHGRWFAGKMITA ++ TY FPDS+
Sbjct: 334 LHGRWFAGKMITAAYVPLPTYHNLFPDSM 362
>gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 163/405 (40%), Positives = 234/405 (57%), Gaps = 46/405 (11%)
Query: 241 EVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDV 300
E P R +++ ++ L+ RD+ +FFS GKVRDVR+I DR+SRRSKG+ Y+EF +
Sbjct: 122 EKSPVRREKSPVSWLPGLR--PRDLEDFFSAVGKVRDVRMISDRSSRRSKGIAYIEFVEA 179
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASG----GGTGPYSGGARRLY 356
SVP+AI L+GQ LLG P++V+ S+AEKN + ++ A A+ G GP RLY
Sbjct: 180 SSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAAAAANNLQKGMMGPL-----RLY 234
Query: 357 VGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNG 414
VG+LHFN+TE+ LR +FEPFG +E +QL +D +TG KG+GF+ FA E A+ AL LNG
Sbjct: 235 VGSLHFNITEEMLRGIFEPFGRIENIQLMVDSDTGRSKGYGFITFADAECAKKALEQLNG 294
Query: 415 QLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSAT 474
E+ GR +KV VTD+S D A D ++ E G L + R LM +L G+
Sbjct: 295 -FELAGRPMKVGHVTDRS---DAVAPPFPDGEEQERAGADLGSTGRLQLMAQLSE-GTGL 349
Query: 475 TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASV 534
+ SA AL + A LGA +AVS + P + ++P+ P
Sbjct: 350 PMPPSA------QQALQMSGAIALGAMAAVSAAMNPGLNMSIPSQP-------------- 389
Query: 535 PIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GF 593
+ + C L NMF P +E +++DI+ +V EC+K G + HI+V+KDSA G
Sbjct: 390 -------LATHCFQLSNMFSPNSELPPGWELDIQHNVIEECNKHGGVVHIYVDKDSAEGN 442
Query: 594 VYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
VY++ +A AA LHGR+F GK+ITA ++ TY FP++
Sbjct: 443 VYIKCPTIPAAMAAVNVLHGRFFNGKLITAAYVPLPTYHNLFPEA 487
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 168/392 (42%), Positives = 227/392 (57%), Gaps = 38/392 (9%)
Query: 255 QICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ YVEF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 315 LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFE 374
LG P++V+ S+AEKN A A S G RLYVG+LHFN+TED LR +FE
Sbjct: 62 LGVPIIVQASQAEKNR-------AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFE 114
Query: 375 PFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQS 432
PFG +E +QL +D ETG KG+GF+ F+ E A+ AL LNG E+ GR +KV VT+++
Sbjct: 115 PFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT 173
Query: 433 GLQDLGANTTGDFDDDEG---GGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTA 489
A++ F D +G G+ L R LM +L G + PA A
Sbjct: 174 -----DASSASSFLDSDGLERTGIDLGTTGRLQLMARLAEG------TGLQIPPAAQQ-A 221
Query: 490 LPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV-PTASVPIFDTIGVPSECLL 548
L + + GA + S ++ + + T L A V P A ++C
Sbjct: 222 LQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLA-----------TQCFQ 270
Query: 549 LKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAA 607
L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +A AA
Sbjct: 271 LSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAA 330
Query: 608 QRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 331 VNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 362
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 224/388 (57%), Gaps = 36/388 (9%)
Query: 255 QICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ YVEF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 315 LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFE 374
LG P++V+ S+AEKN A A S G RLYVG+LHFN+TED LR +FE
Sbjct: 62 LGVPIIVQASQAEKNR-------AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFE 114
Query: 375 PFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQS 432
PFG +E +QL +D ETG KG+GF+ F+ E A+ AL LNG E+ GR +KV VT+++
Sbjct: 115 PFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELTGRPMKVGHVTERT 173
Query: 433 GLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
A++ D D+ E G+ L R LM +L G + PA AL +
Sbjct: 174 DASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAEG------TGLQIPPAAQQ-ALQM 224
Query: 493 PTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNM 552
+ GA + + T + + + + P A ++C L NM
Sbjct: 225 SGSLAFGAVADLQTRLSQQTEASALAAAASVQ-----PLA-----------TQCFQLSNM 268
Query: 553 FDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRAL 611
F+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +A AA AL
Sbjct: 269 FNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNAL 328
Query: 612 HGRWFAGKMITATFMVPQTYEAKFPDSI 639
HGRWFAGKMITA ++ TY FPDS+
Sbjct: 329 HGRWFAGKMITAAYVPLPTYHNLFPDSM 356
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 224/388 (57%), Gaps = 36/388 (9%)
Query: 255 QICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ YVEF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 315 LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFE 374
LG P++V+ S+AEKN A A S G RLYVG+LHFN+TED LR +FE
Sbjct: 62 LGVPIIVQASQAEKNR-------AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFE 114
Query: 375 PFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQS 432
PFG +E +QL +D ETG KG+GF+ F+ E A+ AL LNG E+ GR +KV VT+++
Sbjct: 115 PFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT 173
Query: 433 GLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
A++ D D+ E G+ L R LM +L G + PA AL +
Sbjct: 174 DASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAEG------TGLQIPPAAQQ-ALQM 224
Query: 493 PTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNM 552
+ GA + + T + + + + P A ++C L NM
Sbjct: 225 SGSLAFGAVADLQTRLSQQTEASALAAAASVQ-----PLA-----------TQCFQLSNM 268
Query: 553 FDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRAL 611
F+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +A AA AL
Sbjct: 269 FNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNAL 328
Query: 612 HGRWFAGKMITATFMVPQTYEAKFPDSI 639
HGRWFAGKMITA ++ TY FPDS+
Sbjct: 329 HGRWFAGKMITAAYVPLPTYHNLFPDSM 356
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 157/406 (38%), Positives = 222/406 (54%), Gaps = 56/406 (13%)
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
E++ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ Y+
Sbjct: 181 EELSPE---ERDMRTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYI 237
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF D SV +A+ LSGQ LLG P+ V+ ++AEKN + +N GP RL
Sbjct: 238 EFRDPESVALALGLSGQRLLGIPISVQHTQAEKNRL-ANIPPPPPPKVIVGPM-----RL 291
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLN 413
YVG+LHFN+TED LR +FEPFG ++ +QL +D +TG KG+GF+ F +DA+ AL LN
Sbjct: 292 YVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLN 351
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSA 473
G E+ GR +KV VT++ D+ + + D D+ + G+ L A R LM KL
Sbjct: 352 G-FELAGRPMKVGNVTER---LDVTTHASLDTDEMDRSGIDLGATGRLQLMFKLAE---- 403
Query: 474 TTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTAS 533
GA AV + T P P +
Sbjct: 404 -------------------------GAGLAVPRAAADALLATAPQ-----------PAPN 427
Query: 534 VPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS-AG 592
P+ D+ + ++C LL NMFDP ET +D++I++DV EC+K G + H++V+K S AG
Sbjct: 428 QPVQDSPAIATQCFLLSNMFDPATETNPSWDVEIEDDVIEECNKHGGVLHVYVDKQSPAG 487
Query: 593 FVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
VY++ + +A A ALHGRWFAG++I A ++ Y F +S
Sbjct: 488 NVYVKCPSIATAVLAVNALHGRWFAGRVIAAAYVPLVNYHTLFQES 533
>gi|412993528|emb|CCO14039.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 221/430 (51%), Gaps = 75/430 (17%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
+RD RT FAY + K+DERD+++FF +AG+V DVR+I DRN SKG+ YVEF D S+P
Sbjct: 246 DRDTRTCFAYNLSTKSDERDIFKFFMKAGEVTDVRIIYDRNRPISKGMAYVEFQDKSSIP 305
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIA------GASGGGTGPYSGGARRLYVG 358
A+ L+G+ L GQ VMVK SEAEKN+ A G G G G G L+V
Sbjct: 306 KALELTGETLRGQKVMVKHSEAEKNIAWEAEQAAKGVTGKGKRGNGDGTQQSGPCALFVA 365
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN-LNGQLE 417
LH + E+ ++ VFEPFG ++ +++ D G G G VQ+ A A++ LNG LE
Sbjct: 366 GLHEGLAEEDVKAVFEPFGALDAIEISRDGNGQSNGHGIVQYREWSHAMLAVSQLNG-LE 424
Query: 418 IVGRAIKVSAVTDQSGLQDLGANT------------------------TGDFDDDEGGGL 453
+VG+A+K+S Q G ++ N G DD
Sbjct: 425 LVGQALKISVAAGQGGAKNDNKNRNNDRSGGGDVGGGGGGGEEDDDDRVGGQMDDTATYA 484
Query: 454 SLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTL------ 507
++A RA LMQKL G ATTI +PTA L A + T
Sbjct: 485 KMDAAKRAELMQKL-AGGDATTIGA-------------IPTATLTHNAVKIKTKEEEKRE 530
Query: 508 VPPLVQGTV-PTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMD 566
+ + QG P+ P +P++C+LLKN+FDP ET EE+ +D
Sbjct: 531 LIMMTQGFFGPSSP---------------------IPTKCVLLKNLFDPAEETDEEWWLD 569
Query: 567 IKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATF 625
I+EDV+GE SK+G+ H V+K++ GF YL+F++ ++A AQ L+ RWFAG+ I F
Sbjct: 570 IEEDVKGEVSKYGECVHAHVDKENPYGFCYLKFDDVEAAKKAQFGLNNRWFAGRSIICDF 629
Query: 626 MVPQTYEAKF 635
+ Y F
Sbjct: 630 QFVEPYNKHF 639
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 160/409 (39%), Positives = 234/409 (57%), Gaps = 55/409 (13%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
+ +++ PE ERD RT+F Q+ + RD+ EFFS GKV+DVRLI +RR KG+
Sbjct: 145 RSDELTPE---ERDARTIFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIA 201
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
YVEF D SV +A+ LSGQ LLG P++V+ ++AEKN + NS G TGP
Sbjct: 202 YVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM----- 255
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-N 411
RLYVG+L FN+TE+ L+ +FEPFG +E +QL +D ETG KG+GF+ F +DA+ AL
Sbjct: 256 RLYVGSLLFNITEEMLKGIFEPFGKIENIQLIMDPETGRSKGYGFLTFRNADDAKKALEQ 315
Query: 412 LNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSG 471
LNG E+ GR +KV VT+++ L + + D D+ + G+ L A R LM KL G
Sbjct: 316 LNG-FELAGRPMKVGNVTERTDL--IQGPSLLDTDELDRSGIDLGATGRLQLMFKLAE-G 371
Query: 472 SATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPT 531
+ I +A A+N T P+ TAP + +A PP
Sbjct: 372 TGLEIPPAAAN-ALNMT--PVVTAPQINQQTA-----PP--------------------- 402
Query: 532 ASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA 591
+ ++C +L NMFDP+NE + +I++DV EC+K G + H++V++ S
Sbjct: 403 ----------IATQCFMLSNMFDPQNENNSLWVKEIRDDVIEECNKHGGVLHVYVDQASP 452
Query: 592 -GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
G VY++ + +A AA +LHGRWFAG++ITA ++ Y + FPD++
Sbjct: 453 QGNVYVKCPSIATAVAAVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAM 501
>gi|170071297|ref|XP_001869868.1| splicing factor [Culex quinquefasciatus]
gi|167867202|gb|EDS30585.1| splicing factor [Culex quinquefasciatus]
Length = 524
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 220/402 (54%), Gaps = 54/402 (13%)
Query: 241 EVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
E+ PE RD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ Y+EF D
Sbjct: 160 ELSPEERDMRTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFRD 219
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
SV +A+ LSGQ LLG P+ V+ ++AEKN + +N GP RLYVG+
Sbjct: 220 PESVALALGLSGQRLLGIPISVQHTQAEKNRL-ANIPPPPPPKVIVGPM-----RLYVGS 273
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLE 417
LHFN+TED LR +FEPFG ++ +QL +D +TG KG+GF+ F +DA+ AL LNG E
Sbjct: 274 LHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNG-FE 332
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIA 477
+ GR +KV VT++ D+ + + D D+ + G+ L A R LM KL
Sbjct: 333 LAGRPMKVGNVTER---LDVTTHASLDTDEMDRSGIDLGATGRLQLMFKLAE-------- 381
Query: 478 GSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIF 537
GA AV + T P P + P+
Sbjct: 382 ---------------------GAGLAVPRAAADALLATAPQ-----------PAPNQPVQ 409
Query: 538 DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS-AGFVYL 596
D+ + ++C LL NMFDP ET +D++I++DV EC+K G + H++V+K S AG VY+
Sbjct: 410 DSPAIATQCFLLSNMFDPATETNPSWDVEIEDDVIEECNKHGGVLHVYVDKQSPAGNVYV 469
Query: 597 RFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
+ + +A A ALHGRWFAG++I A ++ Y F +S
Sbjct: 470 KCPSIATAVLAVNALHGRWFAGRVIAAAYVPLVNYHTLFQES 511
>gi|391336770|ref|XP_003742751.1| PREDICTED: RNA-binding protein 39-like [Metaseiulus occidentalis]
Length = 520
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 227/397 (57%), Gaps = 55/397 (13%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I+D +R+SKG+ YVEF+D+ SVP
Sbjct: 171 ERDLRTVFCMQLSQRIRARDLEDFFSAVGKVRDVRMIVDNKTRKSKGIAYVEFFDLESVP 230
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+A+ L+GQ L G P++V+P++AE+N Q+N + A + G RLYVG+LHF++
Sbjct: 231 LAMGLNGQKLFGVPIIVQPTQAERNR-QANQTAAS---------TKGPMRLYVGSLHFDI 280
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAI 423
+E L+++FEPFG ++ V+L ++TG KG+GFV F + A+ A+ LNG E+ GR +
Sbjct: 281 SEQMLKEIFEPFGRLDRVELIKEDTGKSKGYGFVTFHEADAAKKAMEQLNG-FELAGRPM 339
Query: 424 KVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTP 483
KV VT++ D A + D ++ + G+ L A R LM KL
Sbjct: 340 KVGNVTERG--MDGSAPSILDNEELDRTGIELGAHGRLALMAKL---------------- 381
Query: 484 AVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVP 543
T + LP A A +A+ + + P+ GQ A Q A
Sbjct: 382 -AEGTGIQLPDA----AKTALQQM------QSAPSF-GQTNNAQQESIA----------- 418
Query: 544 SECLLLKNMFDPKNETYE-EFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQ 602
++C LL NMFD E ++D++++EDV EC K G H FV+K++A VY++ +
Sbjct: 419 TQCFLLSNMFDAAEAHQEKDWDLELREDVLQECRKHGGAVHCFVDKEAAN-VYVKCPSIA 477
Query: 603 SAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+A AA LHGR+FAG++ITA ++ TY FPD++
Sbjct: 478 TAVAAVGVLHGRFFAGRVITAAYVPVMTYHQLFPDAV 514
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 227/403 (56%), Gaps = 53/403 (13%)
Query: 241 EVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
E+ PE RD RTVF Q+ + RD+ EFFS GKV+DVRLI +RR KG+ YVEF D
Sbjct: 2 ELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKD 61
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
SV +A+ LSGQ LLG P++V+ ++AEKN + NS G TGP RLYVG+
Sbjct: 62 PESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM-----RLYVGS 115
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLE 417
LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ F +DA+ AL LNG E
Sbjct: 116 LHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG-FE 174
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIA 477
+ GR +KV VT+++ L + + D D+ + G+ L A R LM KL
Sbjct: 175 LAGRPMKVGNVTERTDL--IQGPSLLDTDELDRSGIDLGATGRLQLMFKL---------- 222
Query: 478 GSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIF 537
T L +P A AA+A L A + P
Sbjct: 223 -------AEGTGLEIPPA----AANA-------------------LNMAPVMTAPQPPPQ 252
Query: 538 DTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYL 596
+ ++C +L NMFDP+NET + +I++DV EC+K G + H++V++ S G VY+
Sbjct: 253 AAPPIATQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYV 312
Query: 597 RFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+ + +A AA +LHGRWFAG++ITA ++ Y + FPD++
Sbjct: 313 KCPSIATAVAAVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAM 355
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 222/397 (55%), Gaps = 45/397 (11%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERDQRTVF QI + RD+ EFFS G VRDVR+I D +RRSKG+ YVEF+++ SV
Sbjct: 246 ERDQRTVFILQIARQTRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 305
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+A+AL+GQ LLG P++++P+ AE+N +N+++ G+ G G + G +LY+G LH ++
Sbjct: 306 LALALNGQKLLGAPLVIQPTLAERNRA-ANNTVGGSLGFGPT-NTTGPLKLYIGQLHTSI 363
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TED LR++FEPFG ++ +++ D +G KG+ +V F +DA+ A+ E+ GR +K
Sbjct: 364 TEDMLRRIFEPFGKIDTLEIATDLSGVSKGYAYVTFRHADDAKRAMEQMNGFELAGRPMK 423
Query: 425 VSAV-TDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTP 483
V V D+ Q T D D+ + G+ L R LM KL GS + SA
Sbjct: 424 VGTVDGDEVPSQ---PQRTLDTDEADRRGIDLGTSGRLHLMAKL-AEGSGLELPKSA--- 476
Query: 484 AVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVP 543
L S+ + +PP+
Sbjct: 477 ---KDMLAQNQQQQQQTDSSQNLAIPPIA------------------------------- 502
Query: 544 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS-AGFVYLRFENTQ 602
++C LL NMFDP ET E + ++++DV EC+K G + HIFV+++S +G VY++ +
Sbjct: 503 TQCFLLSNMFDPAQETGENWADEVRDDVIEECAKNGGVVHIFVDRESPSGNVYVKCPSVA 562
Query: 603 SAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+A+ + +LHGRWF+GK+ITA ++ +Y FP+S+
Sbjct: 563 AAYKSVNSLHGRWFSGKVITANYIPVASYSQLFPESV 599
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 157/400 (39%), Positives = 229/400 (57%), Gaps = 51/400 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
+RD RT+F Q+ + RD+ EFFS GKVR+V+LI D++S+RSKG+ YVEF D+ S+P
Sbjct: 100 DRDARTIFCMQLAQRIRVRDLEEFFSSVGKVREVKLIQDKHSKRSKGIAYVEFKDLESIP 159
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKN-LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
+A+ LSGQ LLG P++V+P+++EKN + + S+ A+ G T +LYVG+LH N
Sbjct: 160 LALGLSGQKLLGVPIVVQPTQSEKNKIAAAQLSLQKAALGPT--------KLYVGSLHEN 211
Query: 364 MTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRA 422
+TE+ ++ +F PFG VE VQ+ D+ G +G+GF+ FA E A+ AL+ LNG EI G+
Sbjct: 212 ITEEMIKGIFSPFGRVEQVQIIKDDAGASRGYGFITFAEAECAKRALDQLNG-FEIAGKP 270
Query: 423 IKVSAV---TDQSGLQDLGANTTG-DFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
IK++ V TD + +Q L + + D D E G+ L R LM KL G+ +
Sbjct: 271 IKLNTVSYGTDMNAMQGLASGPSFLDNDAVERAGIDLGTTGRLQLMAKLAE-GTGLEV-- 327
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFD 538
P+ AL L + LG +P GT T + PI
Sbjct: 328 ----PSAAQQALYLGQSMGLG--------LPQSAAGT---------------TGAPPIAT 360
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRF 598
T C L NMFDP NET +D +I++DV EC + G + H+FV+K S G VY++
Sbjct: 361 T------CFQLSNMFDPLNETGSSWDKEIRDDVIEECQRHGAVYHVFVDKQSKGNVYVKC 414
Query: 599 ENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
++ +A + ALHGR+FAG MITA ++ Y + FPD+
Sbjct: 415 DSVSAAANSVAALHGRYFAGNMITAAYVPVVNYHSLFPDA 454
>gi|195996811|ref|XP_002108274.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
gi|190589050|gb|EDV29072.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
Length = 351
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/387 (39%), Positives = 216/387 (55%), Gaps = 52/387 (13%)
Query: 255 QICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
Q+ + R + E FS G++RD+R+I DRNSRRSKG+ YVEF V SV A+ L+G +
Sbjct: 2 QLAGRTGRRQLEELFSPVGEMRDIRVIADRNSRRSKGIAYVEFRLVDSVDKALKLNGTKV 61
Query: 315 LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFE 374
G P+M++ +++EKN + + + A G T RLY+G+LH+N+ ED LR +FE
Sbjct: 62 EGIPIMIQRTQSEKNKIAALQAQQKAQQGPT--------RLYIGSLHYNINEDMLRAIFE 113
Query: 375 PFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQS 432
PFG VE V + D +T KG+GF+Q+ + AR AL LNG LE+ GR IKV VTD+S
Sbjct: 114 PFGLVENVNIIRDSDTNVSKGYGFIQYKEPDSARRALEQLNG-LEVAGRPIKVGTVTDRS 172
Query: 433 GLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
DL A + D DD E GG+ +N+ SR LM KL ++ +ATT +V V L
Sbjct: 173 A--DLSAMSALDDDDTERGGIEMNSLSRVALMAKLSQTHNATT-VPVSVPVPVPVPGPTL 229
Query: 493 PTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNM 552
P L+ AA+ V S C L+ NM
Sbjct: 230 PATGLIPAANTVQA-------------------------------------SPCFLISNM 252
Query: 553 FDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRAL 611
FDP ET +++D+DI++D+ EC+K G + H++V+K S G VY++ + A A ++L
Sbjct: 253 FDPAKETDQDWDLDIRDDIIEECNKHGNVYHVYVDKTSPKGIVYVKCQTIDVAARAVKSL 312
Query: 612 HGRWFAGKMITATFMVPQTYEAKFPDS 638
+GRWFAG MITA F+ +Y FP +
Sbjct: 313 NGRWFAGNMITAQFLSLASYHTTFPQA 339
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 220/400 (55%), Gaps = 51/400 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERDQRTVF QI + RD+ EFFS G VRDVR+I D +RRSKG+ YVEF+++ SV
Sbjct: 149 ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 208
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG----TGPYSGGARRLYVGNL 360
+A+AL+GQ LLG P++++P+ AE+N +N+++ G G G TGP +LYVG L
Sbjct: 209 LALALNGQKLLGAPLVIQPTLAERNRA-ANNTVGGTLGFGPTNTTGPL-----KLYVGQL 262
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVG 420
H ++TED L ++F+PFG +E +++ D +G KG+ +V F +D + A+ E+ G
Sbjct: 263 HTSITEDMLGRIFDPFGKIENLEIATDLSGVSKGYAYVTFRHADDGKRAMEQMNGFELAG 322
Query: 421 RAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSA 480
R +KV +V + L T D DD + G+ L R LM KL GS + SA
Sbjct: 323 RPMKVCSV-EGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAE-GSGLELPKSA 380
Query: 481 VTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTI 540
+ L +A+A +PP+
Sbjct: 381 KEILAQNQQ-------QLESATATGPAIPPIA---------------------------- 405
Query: 541 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFE 599
++C +L NMFDP ET E + ++++DV EC+K G + HIFV+K S G VY++
Sbjct: 406 ---TQCFMLSNMFDPSQETGETWADEVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCP 462
Query: 600 NTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+ +AF + ALHGRWF+GK+ITA ++ +Y FPDS+
Sbjct: 463 SVAAAFKSVNALHGRWFSGKVITANYVPVASYSQLFPDSV 502
>gi|312070862|ref|XP_003138342.1| hypothetical protein LOAG_02757 [Loa loa]
Length = 648
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 219/400 (54%), Gaps = 51/400 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERDQRTVF QI + RD+ EFFS G VRDVR+I D +RRSKG+ YVEF+++ SV
Sbjct: 271 ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 330
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG----TGPYSGGARRLYVGNL 360
+A+AL+GQ LLG P++++P+ AE+N +N+++ G G G TGP +LYVG L
Sbjct: 331 LALALNGQKLLGAPLVIQPTLAERNRA-ANNTVGGTLGFGPTNTTGPL-----KLYVGQL 384
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVG 420
H ++TED L ++F+PFG +E +++ D +G KG+ +V F +D + A+ E+ G
Sbjct: 385 HTSITEDMLGRIFDPFGKIENLEIATDLSGVSKGYAYVTFRHADDGKRAMEQMNGFELAG 444
Query: 421 RAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSA 480
R +KV +V L T D DD + G+ L R LM KL GS + SA
Sbjct: 445 RPMKVCSVEGDE-LPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKL-AEGSGLELPKSA 502
Query: 481 VTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTI 540
+ L +A+A +PP+
Sbjct: 503 KEILAQNQQ-------QLESATATGPAIPPIA---------------------------- 527
Query: 541 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFE 599
++C +L NMFDP ET E + ++++DV EC+K G + HIFV+K S G VY++
Sbjct: 528 ---TQCFMLSNMFDPSQETGETWADEVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCP 584
Query: 600 NTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+ +AF + ALHGRWF+GK+ITA ++ +Y FPDS+
Sbjct: 585 SVAAAFKSVNALHGRWFSGKVITANYVPVASYSQLFPDSV 624
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 222/397 (55%), Gaps = 45/397 (11%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERDQRTVF QI + RD+ EFFS G VRDVR+I D +RRSKG+ YVEF+++ SV
Sbjct: 163 ERDQRTVFILQIARQTRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 222
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+A+AL+GQ LLG P++++P+ AE+N +N+++ G+ G G + G +LY+G LH ++
Sbjct: 223 LALALNGQKLLGAPLVIQPTLAERNRA-ANNTVGGSLGFGPT-NTTGPLKLYIGQLHTSI 280
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TED LR++FEPFG ++ +++ D +G KG+ +V F +DA+ A+ E+ GR +K
Sbjct: 281 TEDMLRRIFEPFGKIDTLEIATDLSGVSKGYAYVTFRHADDAKRAMEQMNGFELAGRPMK 340
Query: 425 VSAV-TDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTP 483
V V D+ Q T D D+ + G+ L R LM KL GS + SA
Sbjct: 341 VGTVDGDEVPSQ---PQRTLDTDEADRRGIDLGTSGRLHLMAKL-AEGSGLELPKSA--- 393
Query: 484 AVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVP 543
L S+ + +PP+
Sbjct: 394 ---KDMLAQNQQQQQQTDSSQNLAIPPIA------------------------------- 419
Query: 544 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS-AGFVYLRFENTQ 602
++C LL NMFDP ET E + ++++DV EC+K G + HIFV+++S +G VY++ +
Sbjct: 420 TQCFLLSNMFDPAQETGENWADEVRDDVIEECAKNGGVVHIFVDRESPSGNVYVKCPSVA 479
Query: 603 SAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+A+ + +LHGRWF+GK+ITA ++ +Y FP+S+
Sbjct: 480 AAYKSVNSLHGRWFSGKVITANYIPVASYSQLFPESV 516
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 220/400 (55%), Gaps = 51/400 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERDQRTVF QI + RD+ EFFS G VRDVR+I D +RRSKG+ YVEF+++ SV
Sbjct: 263 ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 322
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG----TGPYSGGARRLYVGNL 360
+A+AL+GQ LLG P++++P+ AE+N +N+++ G G G TGP +LYVG L
Sbjct: 323 LALALNGQKLLGAPLVIQPTLAERNRA-ANNTVGGTLGFGPTNTTGPL-----KLYVGQL 376
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVG 420
H ++TED L ++F+PFG +E +++ D +G KG+ +V F +D + A+ E+ G
Sbjct: 377 HTSITEDMLGRIFDPFGKIENLEIATDLSGVSKGYAYVTFRHADDGKRAMEQMNGFELAG 436
Query: 421 RAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSA 480
R +KV +V + T D DD + G+ L R LM KL GS + SA
Sbjct: 437 RPMKVCSVEGDEMPPPVPQRTL-DTDDADRRGIDLGTSGRLHLMAKL-AEGSGLELPKSA 494
Query: 481 VTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTI 540
+ L +A + G A +PP+
Sbjct: 495 -KEILAQNQQQLESATVTGPA------IPPIA---------------------------- 519
Query: 541 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFE 599
++C +L NMFDP ET E + ++++DV EC+K G + HIFV+K S G VY++
Sbjct: 520 ---TQCFMLSNMFDPSQETGETWADEVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCP 576
Query: 600 NTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+ +AF + ALHGRWF+GK+ITA ++ +Y FPDS+
Sbjct: 577 SVAAAFKSVNALHGRWFSGKVITANYVPVASYSQLFPDSV 616
>gi|402588492|gb|EJW82425.1| splicing factor, partial [Wuchereria bancrofti]
Length = 471
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 219/400 (54%), Gaps = 51/400 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERDQRTVF QI + RD+ EFFS G VRDVR+I D +RRSKG+ YVEF+++ SV
Sbjct: 94 ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 153
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG----TGPYSGGARRLYVGNL 360
+A+AL+GQ LLG P++++P+ AE+N +N+++ G G G TGP +LYVG L
Sbjct: 154 LALALNGQKLLGAPLVIQPTLAERNRA-ANNTVGGTLGFGPTNTTGPL-----KLYVGQL 207
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVG 420
H ++TED L ++F+PFG +E +++ D +G KG+ +V F +D + A+ E+ G
Sbjct: 208 HTSITEDMLGRIFDPFGKIENLEIATDLSGVSKGYAYVTFRHADDGKRAMEQMNGFELAG 267
Query: 421 RAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSA 480
R +KV +V + L T D DD + G+ L R LM KL GS + SA
Sbjct: 268 RPMKVCSV-EGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAE-GSGLELPKSA 325
Query: 481 VTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTI 540
+ L +A+ +PP+
Sbjct: 326 KEILAQNQQ-------QLESATVTGPAIPPIA---------------------------- 350
Query: 541 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFE 599
++C +L NMFDP ET E + ++++DV EC+K G + HIFV+K S G VY++
Sbjct: 351 ---TQCFMLSNMFDPSQETGETWADEVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCP 407
Query: 600 NTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+ +AF + ALHGRWF+GK+ITA ++ +Y FPDS+
Sbjct: 408 SVAAAFKSVNALHGRWFSGKVITANYVPVASYSQLFPDSV 447
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 223/415 (53%), Gaps = 54/415 (13%)
Query: 232 KEKKEQVEPEVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
+ ++ Q PE+ PE RD RTVF +Q+ + +RD+ +FF+ GK+RDVRLIMD ++RSK
Sbjct: 86 RTERRQKSPELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSK 145
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
G+ YVEF +V S +A+ L+G LLG P+ ++ S AEKN V + S+ S GP
Sbjct: 146 GIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNKGP--- 202
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA 409
+LY+G+LH+N+TE+ L+ +FEPFG +E ++L D T +G+GFV + +DA+ A
Sbjct: 203 --MKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKA 260
Query: 410 LN-LNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEG--GGLSLNARSRALLMQK 466
L+ LNG E+ GR +KV+ VT++S L A D+DE G+ L R LM K
Sbjct: 261 LDQLNG-FELAGRPMKVNHVTERSEYACLSA-----LDNDEADRSGVDLGTTGRLALMAK 314
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L T L +P A L H GQ
Sbjct: 315 L-----------------AEGTGLEIPKAAL------------------AQLHIGQNNPI 339
Query: 527 LQVPTASVPIFDTI-GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIF 585
L + V ++C +L NMFDP T+ F+ +I++DV EC+K G HIF
Sbjct: 340 LGSAGSVSSSSAIAPPVCTQCFMLSNMFDPHVATHSVFE-EIRDDVIEECTKAGGCLHIF 398
Query: 586 VEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
V++ SA G VY++ + A LHGR+F+G++ITA ++ Y FPDS+
Sbjct: 399 VDRTSAQGNVYVKCPSIAVATQCVNMLHGRYFSGRLITAAYVPLINYHQLFPDSV 453
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 224/415 (53%), Gaps = 54/415 (13%)
Query: 232 KEKKEQVEPEVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
+ ++ Q PE+ PE RD RTVF +Q+ + +RD+ +FF+ GK+RDVRLIMD ++RSK
Sbjct: 86 RTERRQKSPELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSK 145
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
G+ YVEF +V S +A+ L+G LLG P+ ++ S AEKN V + S+ S GP
Sbjct: 146 GIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNRGPM-- 203
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGH-CKGFGFVQFARLEDARNA 409
+LY+G+LH+N+TE+ L+ +FEPFG +E ++L D T + +G+GFV + +DA+ A
Sbjct: 204 ---KLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKA 260
Query: 410 LN-LNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEG--GGLSLNARSRALLMQK 466
L+ LNG E+ GR +KV+ VT++S L A D+DE G+ L R LM K
Sbjct: 261 LDQLNG-FELAGRPMKVNHVTERSEYACLSA-----LDNDEADRSGVDLGTTGRLALMAK 314
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L T L +P A L H GQ
Sbjct: 315 L-----------------AEGTGLEIPKAAL------------------AQLHIGQNNPI 339
Query: 527 LQVPTASVPIFDTI-GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIF 585
L + V ++C +L NMFDP T+ F+ +I++DV EC+K G HIF
Sbjct: 340 LGSAGSVSSSSAIAPPVCTQCFMLSNMFDPHVATHSVFE-EIRDDVIEECTKAGGCLHIF 398
Query: 586 VEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
V++ SA G VY++ + A LHGR+F+G++ITA ++ Y FPDS+
Sbjct: 399 VDRTSAQGNVYVKCPSIAVATQCVNMLHGRYFSGRLITAAYVPLINYHQLFPDSV 453
>gi|303279518|ref|XP_003059052.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460212|gb|EEH57507.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 515
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/410 (37%), Positives = 214/410 (52%), Gaps = 52/410 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
+RD RTVFAY + KADER++Y+FFS AG V DVR+I DRN+ RSKG+ YVEF D S+
Sbjct: 137 DRDTRTVFAYNLSTKADEREIYKFFSAAGIVSDVRIIYDRNTPRSKGMAYVEFKDKASIE 196
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLV------------QSNSSIAGASGGGTGPYSGGA 352
A++L+GQ L Q VMVK SEAEKN+ + +++ A P + G
Sbjct: 197 NALSLTGQTLRNQVVMVKSSEAEKNIAWEAEQATKREEQKLATTVDPAINPNLNP-TAGP 255
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN- 411
+L V +H N+ E+ L+ VFEPFG + + + D++G VQ+ + A A++
Sbjct: 256 CKLRVEGVHPNVREEDLKAVFEPFGETDFITIDKDQSGGAH----VQYKLTQQAMLAVSQ 311
Query: 412 LNGQLEIVGRAIKVSAV------TDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQ 465
LNG LE+VG+ +KV + + AN +D E G+ +++R RA LM
Sbjct: 312 LNG-LELVGKTLKVFVAPVVVNPATAAAIAYTQANAVSLSEDAE--GVRMDSRGRAALMA 368
Query: 466 KLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGT 525
+L + AG + V + A A P + +PT G LG
Sbjct: 369 RLAGTSDGGDFAGVDASGRV------------ITAQEAAKLATPQMPAAALPTAQGVLGP 416
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIF 585
+PT + LLLKN+FDPK ET E+ DI EDV+ EC K G + H
Sbjct: 417 GSPIPT-------------QTLLLKNLFDPKEETEPEWWNDIAEDVKDECGKHGAVAHCH 463
Query: 586 VEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
V+KDS GFVYL+F + A AQ ALH RWFAG+MI A + Y F
Sbjct: 464 VDKDSEGFVYLKFAEVKGAERAQAALHSRWFAGRMIAAEYQFTAVYNKHF 513
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 217/384 (56%), Gaps = 35/384 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 418
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK 588
P A ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K
Sbjct: 419 QPLA-----------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK 467
Query: 589 DSA-GFVYLRFENTQSAFAAQRAL 611
+SA G VY++ + +A + +
Sbjct: 468 NSAQGNVYVKCPSIAAAHCCCQCI 491
>gi|302852020|ref|XP_002957532.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
gi|300257174|gb|EFJ41426.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
Length = 386
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 160/409 (39%), Positives = 228/409 (55%), Gaps = 44/409 (10%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ER RT FAY + LKADERD+Y+ FS+ GKV D++LI D+ ++RSKG Y+EF V V
Sbjct: 2 ERSTRTAFAYNLNLKADERDIYQLFSKVGKVVDIKLITDKTTKRSKGFAYIEFSKVEEVI 61
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASG--GGTGP---YSGGARRLYVGN 359
A+AL+G +GQ +MVK SE EKNL ++ +A G G TGP G +LYV N
Sbjct: 62 AAVALTGTVFMGQAIMVKSSEHEKNLAWVSTYLASLLGAAGVTGPNDTLPVGPCKLYVAN 121
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL-NLNGQLEI 418
L+ + E ++Q+F PFG ++ VQL D TG +G+G+V +A + DA A+ + NG++ +
Sbjct: 122 LNAAIAEADVQQLFAPFGQIDNVQLVRDATGRSQGYGYVTYANVLDATKAVEHWNGRV-V 180
Query: 419 VGRAIKVSAVTDQSGLQDLGANTT--------GDFDDDEG-GGLSLNARSRALLMQKLDR 469
G A+KVS + S ++ G T G+ D++E GGL L + R LM +L
Sbjct: 181 AGSALKVSVSSKGSCIRFFGITRTVLLLRCRVGELDEEEARGGLKLTSDRRQALMARLAS 240
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
S +A ALP+P+ P L A AV P LG V
Sbjct: 241 SAGLQPVA----------PALPVPSVPALAVAPAVL---------AGPKLDPSLGLIQSV 281
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDP---KNETYEEFDMDIKEDVEGECSKFGKLKHIFV 586
+ PI P+ CLL+KNMFDP + E +++ +I +DV+ ECSK+G + HI V
Sbjct: 282 LGPASPI------PTPCLLIKNMFDPAAAQEEMGQDWAEEIAQDVQDECSKYGAVVHIHV 335
Query: 587 EKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+K S G VYL+ + ++A AAQ A++GRWFAG+ + F Y A F
Sbjct: 336 DKSSKGCVYLKCGSVEAASAAQAAMNGRWFAGRQLAVEFQFLAPYNAHF 384
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 207/390 (53%), Gaps = 65/390 (16%)
Query: 249 RTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
R+VF Q+ + RD+ FF G V D R++ DR SRRSKG+GYVEF V V
Sbjct: 268 RSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVTDRISRRSKGIGYVEFRSVELVDK 327
Query: 306 AIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMT 365
A+ LSG ++G P+ ++ +EAE+N + G + P+ G +LYVG+LHFN+T
Sbjct: 328 ALGLSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPH--GGMQLYVGSLHFNLT 385
Query: 366 EDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
E ++QVFEPFG +E V L D TG KG+ FVQ+ R EDAR AL E+ GR ++
Sbjct: 386 ESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQMEGFELAGRTLR 445
Query: 425 VSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPA 484
V+ V ++ + ++ DE GG +LNA SR LMQKL R+ PA
Sbjct: 446 VNTVHEKGTTKYAQQDSL-----DEAGGGNLNAASRQALMQKLARTDQ----------PA 490
Query: 485 VNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPS 544
V +PP+ + +P + S
Sbjct: 491 VK---------------------LPPVTKPNIPQ----------------------SMQS 507
Query: 545 ECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQS 603
+LLKNMF+P+ ET ++D D+ EDV+GEC K+GK++ I VE++S G +Y++F++ +S
Sbjct: 508 RSVLLKNMFNPEEETERDWDKDLAEDVKGECEDKYGKVEFIKVERESQGEIYVKFDSIES 567
Query: 604 AFAAQRALHGRWFAGKMITATFMVPQTYEA 633
A A + LHGRWF G ++A F+ +A
Sbjct: 568 AKNAIQGLHGRWFGGNQVSAAFISDAIMQA 597
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 158/443 (35%), Positives = 224/443 (50%), Gaps = 95/443 (21%)
Query: 240 PEVDP-ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
PE++ ERD+RT+F Q+ + +D++ FF +AG V+D +++ DR S RSKGVGYVEF
Sbjct: 156 PELNEDERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFK 215
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
+ SV AI L+GQ LLG P++ + +EAEKN Q+ + A A T P+ RLYVG
Sbjct: 216 NEESVAAAIRLTGQMLLGIPIIAQLTEAEKNR-QARNPEATAGNQHTAPF----HRLYVG 270
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
N+HF++TED L VFEPFG +E VQL DETG KG+ FVQFA E AR+AL E+
Sbjct: 271 NVHFSITEDDLTNVFEPFGELEFVQLQKDETGRSKGYAFVQFANPEQARDALEKMNGFEL 330
Query: 419 VGRAIKV------------------SAVTDQS-------------GLQDLGANT------ 441
GRAI+V ++ T+QS G+Q G+N
Sbjct: 331 AGRAIRVGLGNDKFTPDAHANRPSGASSTNQSNFQGSSFSGQGGRGVQAGGSNNFDRAGG 390
Query: 442 --------TGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLP 493
DD + G++ N SR LM+KL R+ A P+V+
Sbjct: 391 RETEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDDA--------QPSVDDRQ---- 438
Query: 494 TAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMF 553
L+ T + P+ + + S C+LL+NMF
Sbjct: 439 -------------------------------KFLRPKTETKPLPINVNMASRCVLLRNMF 467
Query: 554 DPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALH 612
DP ET E + +++EDV EC K+G + HI ++ S G +YL+F+ Q A + L+
Sbjct: 468 DPAEETGEAWIKELEEDVRSECEEKYGHVVHISLDVSSQGDIYLKFDRVQGGENAIKGLN 527
Query: 613 GRWFAGKMITATFMVPQTYEAKF 635
GR+F GK ITA +V Y + F
Sbjct: 528 GRYFGGKQITAQPVVDAVYSSLF 550
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 210/393 (53%), Gaps = 67/393 (17%)
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYV 295
EP+ D + + R+VF Q+ + RD+ FF G V D R++ DR SRRSKG+GYV
Sbjct: 244 EPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDRLSRRSKGIGYV 302
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF + V AI+LSG ++G PVMV+ +E+E+N + G + P+ GA +L
Sbjct: 303 EFRSIDMVEKAISLSGTVVMGLPVMVQLTESERNKLHPGDGNLNLPPGVSAPH--GAMQL 360
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNG 414
YVG+LHFN+TE ++QVFEPFG +E V L D TG KG+ FVQ+ R EDAR AL
Sbjct: 361 YVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQME 420
Query: 415 QLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSAT 474
E+ GR ++V+ V ++ + +T DE GG +LNA SR LMQKL R
Sbjct: 421 GFELAGRTLRVNTVHEKGTARYAQQDTL-----DEAGGGNLNAASRQALMQKLAR----- 470
Query: 475 TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASV 534
P+P P PT P A+Q
Sbjct: 471 --------------IEPIPKPP----------------TNNKPTIP----QAMQ------ 490
Query: 535 PIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGF 593
S +LLKNMFDP+ ET ++D D+ EDV+GEC K+G++ I VE+++ G
Sbjct: 491 ---------SRSVLLKNMFDPEEETERDWDKDLAEDVKGECEDKYGQVDAIKVEQETQGK 541
Query: 594 VYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
+Y++F + SA A + L+GRWF G+ ++A F+
Sbjct: 542 IYVKFNSIDSAKNAIQGLNGRWFGGRQVSAGFI 574
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 210/393 (53%), Gaps = 67/393 (17%)
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYV 295
EP+ D + + R+VF Q+ + RD+ FF G V D R++ DR SRRSKG+GYV
Sbjct: 244 EPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDRLSRRSKGIGYV 302
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF + V AI+LSG ++G PVMV+ +E+E+N + G + P+ GA +L
Sbjct: 303 EFRSIDMVEKAISLSGTVVMGLPVMVQLTESERNKLHPGDGNLNLPPGVSAPH--GAMQL 360
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNG 414
YVG+LHFN+TE ++QVFEPFG +E V L D TG KG+ FVQ+ R EDAR AL
Sbjct: 361 YVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQME 420
Query: 415 QLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSAT 474
E+ GR ++V+ V ++ + +T DE GG +LNA SR LMQKL R
Sbjct: 421 GFELAGRTLRVNTVHEKGTARYAQQDTL-----DEAGGGNLNAASRQALMQKLAR----- 470
Query: 475 TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASV 534
P+P P PT P A+Q
Sbjct: 471 --------------IEPIPKPP----------------TNNKPTIP----QAMQ------ 490
Query: 535 PIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGF 593
S +LLKNMFDP+ ET ++D D+ EDV+GEC K+G++ I VE+++ G
Sbjct: 491 ---------SRSVLLKNMFDPEEETERDWDKDLAEDVKGECEDKYGQVDAIKVEQETQGE 541
Query: 594 VYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
+Y++F + SA A + L+GRWF G+ ++A F+
Sbjct: 542 IYVKFNSIDSAKNAIQGLNGRWFGGRQVSAGFI 574
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 271/543 (49%), Gaps = 111/543 (20%)
Query: 134 ERDHDTDRDREKDKEKERE--KSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVI 191
ERD + D+DREKD+ ++R+ +SHRS E DRD + ER +
Sbjct: 213 ERDRERDKDREKDRARDRDPKRSHRSRDLDE----DRDRHRKRPRSRSRERSKE------ 262
Query: 192 ERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDP------- 244
R R++ RE R R +E E E D + R + EP P
Sbjct: 263 ----PRPRDLDGRESERQRRFEEAEGE----DRRRRPDRRSPRYRPYEPTGSPPRRSSSP 314
Query: 245 -----ERDQRTVFAYQICLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
E + R+VF Q+ + +R++++FF +AGKVRD RLI DR SRRSKGVGYVEF
Sbjct: 315 HLTEEEHEMRSVFVSQLSARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVGYVEFR 374
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGG--------------- 343
++ SV A+AL+G LLG PVMV+ +EAEKN ++ G
Sbjct: 375 ELESVQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNVPPGFVATAPPPPVPRPYV 434
Query: 344 -----GTGPYSGGA-RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFG 396
G GP + RLYVG+L+FN+T+D +RQVF+PFG +E V L D+ TG KG+
Sbjct: 435 TPKARGPGPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYA 494
Query: 397 FVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLN 456
FVQF + DA+NA+ ++ GRA++V +
Sbjct: 495 FVQFKNMHDAKNAMEKMNGFQLAGRALRV----------------------------EIK 526
Query: 457 ARSRALLMQKLDRSGSATTIAGSA-VTPAVNSTALPLPTA-------PLLGAASAVS--T 506
A+ A L+ + +A +A VTP+ + P P+ P+ G + +S
Sbjct: 527 AQPPAALL-----NATAPGVANPVIVTPSGGNFTAPAPSTFEERLEDPIGGNLNQISRVE 581
Query: 507 LVPPLVQGTVPTH-PGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDM 565
L+ L + PT+ P +PTA+ S +LLKNMF+P+ ET + +D+
Sbjct: 582 LMHKLARTEQPTNVPVTDMFRPNIPTAT----------SRSVLLKNMFNPEEETEQGWDI 631
Query: 566 DIKEDVEGEC-SKFGKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITA 623
++++DV+GEC K+G + I +EK+S AG +Y+ F++ SA A L+ RWF G+ ITA
Sbjct: 632 ELRDDVKGECEEKYGPVLAIAIEKESTAGDIYITFDSVPSAQKAITGLNNRWFGGRQITA 691
Query: 624 TFM 626
F+
Sbjct: 692 AFI 694
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 152/434 (35%), Positives = 226/434 (52%), Gaps = 68/434 (15%)
Query: 213 KEREKERESRDNDKESRRPKEKKEQVEPEVDP---ERDQRTVFAYQICLKADERDVYEFF 269
K++E++R+ ++ K Q P+++P +RD RT+ Q+ K RD+ +FF
Sbjct: 115 KDKERDRDRNSPPSVAQPIGSYKRQRSPDLEPPSVDRDNRTIMCMQLSAKVTNRDLEDFF 174
Query: 270 SRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN 329
RAG VRDV +I DR SRRSKG+ YVEF + SV A++ SGQ + G P+M++P+ AEKN
Sbjct: 175 MRAGVVRDVHIIADRQSRRSKGIAYVEFQEESSVFTALSFSGQKVHGIPIMIQPTMAEKN 234
Query: 330 -LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD- 387
L + ++ A G ++LYVG+LH+N+TED L+ +F PFG VE V + D
Sbjct: 235 RLAAAAENLKKAE---------GPKKLYVGSLHYNITEDMLQGIFSPFGNVERVSIMRDT 285
Query: 388 ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFD 446
T +G+ FV+F + A A+ NLNG E+ GR +KV+ T + L ++ + D D
Sbjct: 286 ATNVSRGYAFVEFRDSDSAERAMANLNG-FELAGRPMKVNYGTVDTSLVNIDSLDGEDMD 344
Query: 447 DDEGGGLSLNARSRALLMQKLDRSGSA-TTIAGSAVTPAVNSTALPLPTAPLLGAASAVS 505
G+ + +SR LM KL +A +I G V P
Sbjct: 345 ----VGVGMTPQSRVALMHKLAAGHNADMSIPGVQVPP---------------------- 378
Query: 506 TLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDM 565
PP T+PT + S C ++ NMFDP ET ++D
Sbjct: 379 ---PPFAVPTMPT----------------------CITSCCFVIGNMFDPSKETGSDWDK 413
Query: 566 DIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATF 625
+I+EDV EC KFG + HI V+K S G VY++ + Q+A AA + +GR +AG +I A
Sbjct: 414 EIREDVLEECVKFGNIFHIHVDKFSQGKVYIKSQTPQTASAAVGSFNGRRYAGNVIHAEL 473
Query: 626 MVPQTYEAKFPDSI 639
+ TY KFP ++
Sbjct: 474 VPENTYHLKFPGAL 487
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 176/526 (33%), Positives = 262/526 (49%), Gaps = 115/526 (21%)
Query: 170 ERERSRDREVIERERSRDREVIERERSRDRE--------------VIERERSRDRELKER 215
+RER +DRE ++R+RDR+ RSRD + + R R+L R
Sbjct: 215 DRERDKDRE---KDRARDRDPKRSHRSRDLDEDRDRHRKRPRSRSRERSKEPRPRDLDGR 271
Query: 216 EKERESR-------DNDKESRRPKEKKEQVEPEVDP------------ERDQRTVFAYQI 256
E ER+ R D + R + EP P E + R+VF Q+
Sbjct: 272 ESERQRRFEEADGEDRRRRPDRRSPRYRPYEPTGSPPRRSSSPHLTEEEHEMRSVFVSQL 331
Query: 257 CLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLL 315
+ +R++++FF +AGKVRD RLI DR SRRSKGVGYVEF ++ SV A+AL+G LL
Sbjct: 332 SARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVGYVEFRELESVQKALALTGTKLL 391
Query: 316 GQPVMVKPSEAEKNLVQSNSSIAGASGG--------------------GTGPYSGGA-RR 354
G PVMV+ +EAEKN ++ G G GP + R
Sbjct: 392 GLPVMVQYTEAEKNRQAMANTQPNVPPGFVATAPPPPVPRPYVAPKARGPGPNDPNSYAR 451
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLN 413
LYVG+L+FN+T+D +RQVF+PFG +E V L D+ TG KG+ FVQF + DA+NA+
Sbjct: 452 LYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKM 511
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSA 473
++ GRA++V + A+ A L+ + +A
Sbjct: 512 NGFQLAGRALRV----------------------------EIKAQPPAALL-----NATA 538
Query: 474 TTIAGSA-VTPAVNSTALPLPTA-------PLLGAASAVS--TLVPPLVQGTVPTH-PGQ 522
+A VTP+ + P P+ P+ G + +S L+ L + PT+ P
Sbjct: 539 PGVANPVIVTPSGGNFTAPAPSTFEERLEDPIGGNLNQISRVELMHKLARTEQPTNVPVT 598
Query: 523 LGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKL 581
+PTA+ S +LLKNMF+P+ ET + +D+++++DV+GEC K+G +
Sbjct: 599 DMFRPNIPTAT----------SRSVLLKNMFNPEEETEQGWDIELRDDVKGECEEKYGPV 648
Query: 582 KHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
I +EK+S AG +Y+ F++ SA A L+ RWF G+ ITA F+
Sbjct: 649 LAIAIEKESTAGDIYITFDSVPSAQKAITGLNNRWFGGRQITAAFI 694
>gi|308807104|ref|XP_003080863.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116059324|emb|CAL55031.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 387
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 155/410 (37%), Positives = 215/410 (52%), Gaps = 50/410 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
+RD RTVF + K DER +++FFS+ GKV DVR+I DRNS SKG+ YVEF D +
Sbjct: 5 DRDTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNSTTSKGMAYVEFSDRKFIH 64
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLV-------QSNSSIAGASGGGTGPYSGGARRLYV 357
A+ +G L G + VK SEAEKN+ + A + G +L V
Sbjct: 65 PALECTGMELHGNAISVKTSEAEKNIAWEAEQAQKKKLGAAYGAAVYGAGGGAGPCKLRV 124
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN-LNGQL 416
G LH ++ED ++ VFEPFG ++ + + ++ G FVQF + A AL+ LNG L
Sbjct: 125 GGLHLALSEDDIKAVFEPFGQLDFISMLKEDDGKYAS-AFVQFRQTSQAMLALSQLNG-L 182
Query: 417 EIVGRAIKVS----AVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
E+VG I+VS T + + G+ D+D GGGL +++R RA LM +L +G
Sbjct: 183 ELVGIPIRVSIASQGATAAASTMVAPTESLGELDED-GGGLKMDSRGRAALMARL--AGQ 239
Query: 473 ATTI-AGSAVTPAVNSTALPLPTA-----PLLGAASAVSTLVPPLVQGTV-PTHPGQLGT 525
I G + PA LPT P+ + P+ QG + P P
Sbjct: 240 DKEIEKGFTIDPATG-----LPTTVDAIKPIDAPGEDLPLAAQPITQGVLGPGSP----- 289
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIF 585
+P+ CLLLKN+F+ ET E+ +DI EDV+GEC KFG++ H F
Sbjct: 290 ----------------IPTPCLLLKNLFNAAEETDPEWWLDIAEDVKGECEKFGEITHTF 333
Query: 586 VEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
V+KDS GFVYL+F + S+ AQ+ALH RWFAG+ I A + TY F
Sbjct: 334 VDKDSQGFVYLKFADVASSTRAQQALHTRWFAGRKIAAEYQFAATYNGHF 383
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 216/449 (48%), Gaps = 107/449 (23%)
Query: 238 VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP D ERD+RTVF Q+ + R++ EFF +AG V D +++ DR S RSKGVGYVEF
Sbjct: 211 AEP-TDDERDRRTVFVQQLAARLRSRELKEFFEQAGPVVDAQIVKDRVSGRSKGVGYVEF 269
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA--RRL 355
+ SV AIAL+GQ LLG P++ + +EAEKN N+ GT S G RL
Sbjct: 270 KEEESVQKAIALTGQKLLGIPIIAQLTEAEKNRQARNTE-------GTATQSNGIPFHRL 322
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQ 415
YVGN+HF++TED L+ VFEPFG +E VQL +E G KG+GFVQF A+ AL
Sbjct: 323 YVGNIHFSITEDDLKNVFEPFGELEFVQLQKEEAGRSKGYGFVQFIDPTQAKEALEKMNG 382
Query: 416 LEIVGRAIKVSAVTD-------QSGLQDLG----------------------ANTTGDF- 445
E+ GR I+V D QS LQ G A TG+F
Sbjct: 383 FELAGRPIRVGLGNDKFTPESTQSLLQRFGGGQANAHAQGSSFSGMGGRGAHAGGTGNFD 442
Query: 446 ----------------DDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTA 489
DD + GG++ + SR LM+KL R+
Sbjct: 443 RTTARDVDKTGGASALDDTDVGGVNFSNYSRDALMRKLART------------------- 483
Query: 490 LPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLL 549
P A + P+V + PTA + C+LL
Sbjct: 484 ----DEPEQKMAPKTQQVKKPVV---------------EQPTA-----------TRCVLL 513
Query: 550 KNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAA 607
KNM+D E+ + ++K+DV+ EC K+GK+ HI + D+ G +Y++F+ Q A
Sbjct: 514 KNMYDQNTESDPNWQDELKDDVKSECDEKYGKVVHIGLALDNNDGEIYIKFDRVQGGENA 573
Query: 608 QRALHGRWFAGKMITATFMVPQTYEAKFP 636
R L+GRWF G MITA ++V Y FP
Sbjct: 574 IRGLNGRWFGGNMITAQYVVDAVYHMNFP 602
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 163/413 (39%), Positives = 218/413 (52%), Gaps = 65/413 (15%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 415
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPK---NETYEEFDMDIKEDVEGECSKFGKLKHIFV 586
T +C L NMF+P+ N ++ F C G
Sbjct: 416 AT-------------QCFQLSNMFNPQTQWNNYHKPF-----------CGYRGN------ 445
Query: 587 EKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 446 -------VYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 491
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 215/415 (51%), Gaps = 75/415 (18%)
Query: 225 DKESRRPKEKKEQVEPEVDPERDQ--------RTVFAYQICLKADERDVYEFFS-RAGK- 274
+ +RRP E P+ DP D+ R+VF Q+ + RD+ FF + G+
Sbjct: 263 NSHNRRPSPSYEP--PQDDPMNDEPSPDDSEARSVFVSQLAARLTARDLGYFFEDKLGEN 320
Query: 275 -VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS 333
V D R++ DR SRRSKG+GYVEF V V AIALSG ++G P+ ++ +EAE+N +
Sbjct: 321 TVMDSRIVTDRISRRSKGIGYVEFRSVELVDKAIALSGTVVMGLPIQIQHTEAERNRLHP 380
Query: 334 NSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHC 392
G + P+ G +LYVG+LHFN++E ++QVFEPFG +E V L D TG
Sbjct: 381 GDGNLNLPPGVSAPH--GGMQLYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRS 438
Query: 393 KGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGG 452
KG+ FVQ+ R EDA+ AL E+ GR ++V+ V ++ A T DE GG
Sbjct: 439 KGYAFVQYKRAEDAKMALEQMDGFELAGRTLRVNTVHEKG-----SARYTQQDSLDEAGG 493
Query: 453 LSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLV 512
+LNA SR LMQKL R TPA + P+
Sbjct: 494 GNLNAASRQALMQKLARIDP---------TPAK----------------------MEPIA 522
Query: 513 QGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVE 572
+ +P + S +L+KNMF+P+ ET ++D D+ EDV+
Sbjct: 523 RPNIPQ----------------------TMQSRSVLMKNMFNPEEETERDWDKDLAEDVK 560
Query: 573 GEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
GEC SK+G++ I VEK+S G +Y++FE +A A L+GRWF G+ ITA F+
Sbjct: 561 GECESKYGRVLAIKVEKESQGEIYVKFETVDAAKNAIEGLNGRWFGGRQITAAFI 615
>gi|430811054|emb|CCJ31450.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 484
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 241/473 (50%), Gaps = 109/473 (23%)
Query: 209 DRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEF 268
+R+ + +K R SR RP ++E + D ERD+RTVF Q+ + R++ F
Sbjct: 73 ERDEYDSKKHRRSRSPVTRESRPPVREESPKLTED-ERDRRTVFVQQLAARLRTRELIAF 131
Query: 269 FSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEK 328
F + G VRD +++ DR S RSKGVGYVEF D SV AI ++GQ LLG P++V+ +EAEK
Sbjct: 132 FEKVGPVRDAQVVKDRVSGRSKGVGYVEFRDEESVHKAINMTGQRLLGIPIIVQLTEAEK 191
Query: 329 NLVQSNSSIAGASGG--GTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL 386
N Q+ + +SGG P+ RLYVGN+HFN+TED LRQ+FEPFG +E VQL
Sbjct: 192 NR-QAKAEAMLSSGGRQSDAPF----HRLYVGNIHFNLTEDDLRQIFEPFGELEFVQLQK 246
Query: 387 D-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV------------SAVT---- 429
+ +TG +G+GFVQ AR+AL E+ GRAI+V SAV
Sbjct: 247 EPDTGRSRGYGFVQ--DPAQARDALEKMNGFELAGRAIRVGLGNDKFTPESTSAVLARFS 304
Query: 430 ----------DQSGLQDLG----ANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATT 475
++ G + +G +++ DD+E GG+S N SR LM+KL R +
Sbjct: 305 GFTGSAFENKNRGGTERIGGPRDGSSSVSLDDNEAGGVSFNNISRDALMRKLAREEGKES 364
Query: 476 IAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVP 535
I A P PT P VQ T
Sbjct: 365 IG----------LAPPKPT---------------PAVQMT-------------------- 379
Query: 536 IFDTIGVPSECLLLKNMFDPKNETY--------------EEFDMDIKEDVEGEC-SKFGK 580
S C+LLKNMF+P+ + + + ++++DV+ EC +K+GK
Sbjct: 380 --------SRCVLLKNMFNPQEYVFVLVFKFLIFFRESGDNWIRELEDDVKAECENKYGK 431
Query: 581 LKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
+ HI VE++S G VY++F+N + A + L+GRWF G+ I+A+F++ Y A
Sbjct: 432 VLHIHVEENSPGDVYIKFDNVVAGERAIQGLNGRWFGGRTISASFLIDAVYTA 484
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 224/442 (50%), Gaps = 94/442 (21%)
Query: 240 PEVDP-ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
PE++ ERD+RT+F Q+ + +D++ FF +AG V+D +++ DR S RSKGVGYVEF
Sbjct: 163 PELNEDERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFK 222
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
+ SV AI L+GQ LLG P++ + +EAEKN Q+ ++ + + T P+ RLYVG
Sbjct: 223 NEESVAAAIRLTGQMLLGIPIIAQLTEAEKNR-QARNTESTSGHHHTAPF----HRLYVG 277
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
N+HF++TE+ L VFEPFG +E VQL DETG KG+ FVQFA E AR+AL E+
Sbjct: 278 NVHFSITEEDLTNVFEPFGELEFVQLQKDETGRSKGYAFVQFANPEQARDALEKMNGFEL 337
Query: 419 VGRAIKV-----------------SAVTDQS-------------GLQDLGANT------- 441
GRAI+V A T+Q G+Q G+N+
Sbjct: 338 AGRAIRVGLGNDKFTPDTHANRPSGASTNQPNFQGSSFSGQGGRGVQAGGSNSFDRAGGR 397
Query: 442 -------TGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPT 494
DD + G++ N SR LM+KL R+ P+V+
Sbjct: 398 EPEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDDP--------QPSVDDRQ----- 444
Query: 495 APLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFD 554
++ T P +PI + + S C+LL+NMFD
Sbjct: 445 ---------------KFLRPKTETKP-------------LPI--NVNMASRCVLLRNMFD 474
Query: 555 PKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHG 613
P ET E + +++EDV EC K+G + HI ++ S G +YL+F+ Q A + L+G
Sbjct: 475 PAEETGENWVKELEEDVRSECEKKYGHVVHISLDASSQGDIYLKFDRVQGGENAIKGLNG 534
Query: 614 RWFAGKMITATFMVPQTYEAKF 635
R+F GK ITA +V Y + F
Sbjct: 535 RYFGGKQITAQPVVDAVYSSLF 556
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 226/419 (53%), Gaps = 20/419 (4%)
Query: 228 SRRPKEKKEQVEPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
S R + K + EP++ + ERD+RTVF Q+ + +++ +FF +AG V++ +++ DR S
Sbjct: 147 SPRKRVKSKTPEPQLTEDERDRRTVFVQQLAARLRTKELIQFFEKAGPVKEAQIVKDRVS 206
Query: 287 RRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG 346
RSKGVGYVEF + SVP+AI ++GQ LLG P++ + +EAEKN Q+ + A S +
Sbjct: 207 GRSKGVGYVEFKNEESVPLAIQMTGQKLLGIPIIAQLTEAEKNR-QARNPEASTSHHNSV 265
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDA 406
P+ RLYVGN+HF++TE L+ VFEPFG +E VQL DETG +G+GFVQF A
Sbjct: 266 PF----HRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQA 321
Query: 407 RNALNLNGQLEIVGRAIKVSAVTDQ-------SGLQDL-GANTTGDFDDDEGGGLSLNAR 458
R AL ++ GR I+V D+ + LQ G N +G GL
Sbjct: 322 REALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHSGGSQGSAFSGLGGRGA 381
Query: 459 SRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT 518
DR+G G+ A++ T + A + + L+ L + P
Sbjct: 382 HAGGSGGAFDRAGGRDNDKGAGNASALDDTDV----AGVNFNNYSRDALMRKLARTDEPA 437
Query: 519 HPGQLGTALQVPTA-SVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-S 576
H + A +P S P+ + S C+LL+NMFDP E E + ++++DV EC
Sbjct: 438 HEAETKRAAVLPKKESKPLPVNVSQASRCVLLRNMFDPAEEEGENWVKELEDDVRAECEE 497
Query: 577 KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
K+G + HI V+ ++ G +YL+FE A + L+GR+F G+ I+A +V Y + F
Sbjct: 498 KYGHVVHISVDPNTQGDIYLKFERVSGGENAIKGLNGRYFGGRQISAQPVVDAVYSSLF 556
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 218/397 (54%), Gaps = 76/397 (19%)
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFS-RAG--KVRDVRLIMDRNSRRSKGVGYV 295
EP+ D + + R+VF Q+ + RD+ FF + G V DVR++ DR SRRSKG+ YV
Sbjct: 126 EPKED-DSEARSVFVSQLAARMTARDLGYFFEDKLGDNSVLDVRIVTDRISRRSKGIAYV 184
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQS-NSSI---AGASGGGTGPYSGG 351
EF + V AI+L+G ++G P+M++ +EAE+N + + SI GASG G
Sbjct: 185 EFGSIELVDKAISLTGTIVMGLPIMIQHTEAERNKTHAGDGSINLPPGASGRGA------ 238
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNAL 410
LYVG+LHFN+TE ++QVFEPFG ++ V L D TG KG+ F+ + R EDA+ AL
Sbjct: 239 --TLYVGSLHFNLTESDIKQVFEPFGELDFVDLHKDSATGRSKGYAFIHYKRAEDAKMAL 296
Query: 411 NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRS 470
E+ GR ++V+ V ++ + +T D D+ GGG +LNA SR LMQKL R
Sbjct: 297 EQMEGFELAGRTLRVNTVHEKGQTR----ISTQDSLDESGGG-NLNAASRQALMQKLARI 351
Query: 471 GSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVP 530
SA P+ P++ P
Sbjct: 352 DSA-----------------PVTQQPIMK------------------------------P 364
Query: 531 TASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKD 589
T + P+ S+ +L++NMFDP+ ET +D D+ EDV+ EC +K+G+++HI VEKD
Sbjct: 365 TVAQPM------TSKSVLMRNMFDPEEETEPAWDKDLAEDVKTECQAKYGRVQHIKVEKD 418
Query: 590 SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
S G +Y++F+ +A AA L+GRWF GK I+ATF+
Sbjct: 419 SEGEIYVQFDTVDAAKAAINGLNGRWFGGKQISATFI 455
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 215/387 (55%), Gaps = 61/387 (15%)
Query: 243 DPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYVEFYD 299
D + + R+VF Q+ + RD+ FF G VRD R++ DR SRRSKG+GYVEF +
Sbjct: 59 DEDSEARSVFVSQLAARLTARDLGYFFEDKLGEGAVRDARIVTDRLSRRSKGIGYVEFKN 118
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
+ V AIALSG ++G P+M++ +E+E+N + +SS+ G + P++ G+ +LYVG+
Sbjct: 119 IDLVNKAIALSGTIVMGLPIMIQLTESERNKIGPSSSLH-LPPGVSHPHA-GSMQLYVGS 176
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
LHFN+TE +RQVFEPFG ++ V L D TG KG+ F+Q+ R EDAR AL E+
Sbjct: 177 LHFNLTESDIRQVFEPFGELDFVDLHRDPATGKSKGYCFIQYKRPEDARMALEQMEGFEL 236
Query: 419 VGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GR ++V+ V D+ + D +D GG L+ N+ SR LMQKL R+
Sbjct: 237 AGRQLRVNTVHDKGQGTVRISTAPQDSLEDTGGVLN-NSTSRHQLMQKLARTEQ------ 289
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFD 538
P+ N+T L++ +P
Sbjct: 290 ----PSKNNTM---------------------LMKSNIPQT------------------- 305
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLR 597
+ S C+LL+NMFDP ET ++D D+ +DV GEC K+GK+ + VEK+S G +Y++
Sbjct: 306 ---LSSRCVLLRNMFDPDEETERDWDKDLADDVRGECEEKYGKVLDLKVEKESEGEIYIK 362
Query: 598 FENTQSAFAAQRALHGRWFAGKMITAT 624
FE+ +SA A + L+GRWF GK +TA+
Sbjct: 363 FESVESAEKAIKGLNGRWFGGKQVTAS 389
>gi|296411655|ref|XP_002835545.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629331|emb|CAZ79702.1| unnamed protein product [Tuber melanosporum]
Length = 533
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 219/430 (50%), Gaps = 77/430 (17%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF D SVP
Sbjct: 134 ERDRRTVFVQQLAARLRTKELITFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDEASVP 193
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
AI L+GQ LLG P++ + +EAEKN Q+ S A A+ P+ RLYVGN+HF++
Sbjct: 194 KAIQLTGQKLLGIPIIAQLTEAEKNR-QARVSAAEATTTNQIPF----HRLYVGNIHFSI 248
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TE L+ VFEPFG +E VQL +E G +G+GFVQ+ AR AL ++ GR I+
Sbjct: 249 TESDLQNVFEPFGELEFVQLQKEEGGRSRGYGFVQYRDPNQAREALEKMNGFDLAGRPIR 308
Query: 425 VSAVTDQ-------------SGLQDL------------------------GANTTGDFDD 447
V D+ SG Q GA + DD
Sbjct: 309 VGLGNDKFTPESTAQMLQRFSGYQGFQGSAFDSRGRGGNDRVGRADDKASGAGASA-LDD 367
Query: 448 DEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAV-NSTALPLPTAPLLGAASAVST 506
+ G++ N SR LLM+KL R +PA N LPL
Sbjct: 368 TDVAGVNFNNYSRDLLMRKLARQDEPAPTDKKTKSPAASNGKDLPL------------RQ 415
Query: 507 LVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMD 566
+P V T+P L VP A S C++LKNMFDP ET + + D
Sbjct: 416 KLPEKVTKTLP---------LDVPMA-----------SRCVVLKNMFDPAEETGDAWIKD 455
Query: 567 IKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATF 625
+++DV+ EC +K+G + HI ++ +S G +Y++FE Q A + L+GR+F G+ I+A+
Sbjct: 456 LEDDVKTECENKYGHVVHIALDPNSQGEIYIKFEKVQGGEKAIQGLNGRFFGGRRISASP 515
Query: 626 MVPQTYEAKF 635
+V Y + F
Sbjct: 516 VVDAVYASLF 525
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 231/458 (50%), Gaps = 94/458 (20%)
Query: 203 ERERSRDRELKEREKERESRDNDKESRRPKEKKE-QVEPEVD-----PER------DQRT 250
++ERSR ++ R R +D++S P + EP VD PE + R+
Sbjct: 217 DKERSRRDHRTPLDEARSERSHDRKSVPPVTRPSPSYEPIVDVDPMNPEEPREDDSEARS 276
Query: 251 VFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKG---------------- 291
VF Q+ + RD+ FF G V D R++ DR SRRSKG
Sbjct: 277 VFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVTDRISRRSKGLLLIISRINTSLTFCL 336
Query: 292 -VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
+GYVEF V V AIALSG ++G P+ ++ +EAE+N + G + S
Sbjct: 337 RIGYVEFRTVELVDKAIALSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSA--SH 394
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNA 409
G +LYVG+LHFN+TE ++QVFEPFG +E V L D TG KG+ FVQ+ R EDAR A
Sbjct: 395 GGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMA 454
Query: 410 LNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
L E+ GR ++V+ V ++ ++ ++ DE GG +LNA SR LMQKL R
Sbjct: 455 LEQMEGFELAGRTLRVNTVHEKGTIRYTQQDSL-----DEAGGGNLNAASRQALMQKLAR 509
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
+ + +TP PP+V+ +P
Sbjct: 510 TDQ------TVITP-------------------------PPVVRPNIPQ----------- 527
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEK 588
+ S +LLKNMF+P+NET ++D D+ EDV+ EC K+GK++ I VEK
Sbjct: 528 -----------TMQSRSVLLKNMFNPENETERDWDKDLAEDVKYECEDKYGKVEFIKVEK 576
Query: 589 DSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
DS G +Y++F++ +SA A + L+GRWF G ++A F+
Sbjct: 577 DSQGEIYVKFDSVESAKNAIQGLNGRWFGGNQVSAGFI 614
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 213/385 (55%), Gaps = 63/385 (16%)
Query: 247 DQRTVFAYQICLKADERDVYEFFS-RAGK--VRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
+ R+VF Q+ + RD+ FF + G+ V D R++ DR SRRSKG+GYVEF V V
Sbjct: 74 EARSVFVSQLAARLTARDLGYFFEDKLGENTVMDARIVTDRISRRSKGIGYVEFRTVDLV 133
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
A+ LSG ++G P+MV+ +EAE+N + + G + P+ GGA +LYVG+LHFN
Sbjct: 134 DKALDLSGTVVMGLPIMVQLTEAERNRLHAGDGNLNLPPGVSAPH-GGAMQLYVGSLHFN 192
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
+TE ++QVFEPFG +E V L D TG KG+ FVQ+ R EDAR A+ E+ GR
Sbjct: 193 LTEADIKQVFEPFGELEFVDLHRDPTTGRSKGYAFVQYKRAEDARMAMEQMEGFELAGRQ 252
Query: 423 IKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVT 482
+KV+ V D+ G+ + DD GGG +LNA SR LMQKL R+ SA
Sbjct: 253 LKVNTVHDKGGVVRYAQTES---LDDSGGG-NLNAASRQALMQKLARTDSA--------- 299
Query: 483 PAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGV 542
PLL P+ + +P +
Sbjct: 300 -------------PLLPE---------PVARPNIPQT----------------------M 315
Query: 543 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENT 601
S +LLKNMFDP+ E+ +++D ++ +DV+GEC SK+GK+ I VEK++ G +Y++F+
Sbjct: 316 ESRSVLLKNMFDPEEESGDDWDKELADDVKGECESKYGKVSAIKVEKETQGEIYVKFDAV 375
Query: 602 QSAFAAQRALHGRWFAGKMITATFM 626
+A A + L+GRWF GK ++A F+
Sbjct: 376 DAARKAVQGLNGRWFGGKQVSAAFI 400
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 215/434 (49%), Gaps = 55/434 (12%)
Query: 229 RRPK----EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
RRP K++ EP D ERD+RTVF Q+ + R++ EFF + G V D +++ DR
Sbjct: 135 RRPSPHRGTKRKTPEP-TDDERDRRTVFVQQLAARLRSRELKEFFQQVGDVVDAQIVKDR 193
Query: 285 NSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG 344
S RSKGVGYVEF + SV AI L+GQ LLG P++ + +EAEKN N+ G
Sbjct: 194 VSGRSKGVGYVEFKEEESVQKAIQLTGQKLLGIPIIAQLTEAEKNRQARNTE-------G 246
Query: 345 TGPYSGGA--RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFAR 402
T S G RLYVGN+HF++TED L+ VFEPFG +E VQL +E G KG+GFVQF
Sbjct: 247 TATQSNGIPFHRLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEEAGRSKGYGFVQFID 306
Query: 403 LEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRAL 462
A+ AL E+ GR I+V D+ + SL R A
Sbjct: 307 PAQAKEALEKMNGFELAGRPIRVGLGNDKFTPESTN---------------SLLQRFGAQ 351
Query: 463 LMQKLDRSGSATTIAGSAVTPAVNSTALPLPTA---PLLGAASAV--------------- 504
Q + GS + G A + P A G ASA+
Sbjct: 352 AQQAHNFQGSQFSGMGGRGAHAGGTGNFDRPAARDVDKTGGASALDDTDVGGVNFSNYSR 411
Query: 505 STLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFD 564
L+ L + P T + P + C+L+KNM+D ET +
Sbjct: 412 DALMRKLARTDEPEQKMAPKTQQKKPVVEQ------AAATRCVLIKNMYDQNTETDPNWQ 465
Query: 565 MDIKEDVEGEC-SKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMIT 622
++KEDV+GEC +K+GK+ HI + D+ G VY++F+ Q A + L+GRWF G+M+T
Sbjct: 466 KELKEDVKGECEAKYGKVVHIDLALDNNDGEVYVKFDRVQGGENAFKGLNGRWFGGRMLT 525
Query: 623 ATFMVPQTYEAKFP 636
A ++V Y FP
Sbjct: 526 AQYVVDAVYHMNFP 539
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/466 (33%), Positives = 222/466 (47%), Gaps = 104/466 (22%)
Query: 223 DNDKESRRPKE-KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
D +E RRP+ K+E P + ERD+RTVF Q+ + +++ FF + G V++ +++
Sbjct: 150 DKPREERRPRSPKREGTPPLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIV 209
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
DR S RSKGVGYVEF + SVP AI L+GQ LLG P++ + +EAEKN Q + A S
Sbjct: 210 KDRVSGRSKGVGYVEFKNEESVPAAIQLTGQRLLGIPIIAQLTEAEKNR-QVRNPEATTS 268
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFA 401
P+ RLYVGN+HF++TE L+ VFEPFG +E VQL +E G +G+GFVQF
Sbjct: 269 NPNQIPF----HRLYVGNIHFSITEADLQNVFEPFGELEFVQLQKEEQGRSRGYGFVQFR 324
Query: 402 RLEDARNALNLNGQLEIVGRAIKVSAVTDQ-------SGLQ------------------- 435
AR AL ++ GR I+V D+ S LQ
Sbjct: 325 DPNQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTASLLQRFHGQSHQQQFQGSAFSGA 384
Query: 436 ---------------------DLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSAT 474
D GA DD + GG++ N SR LM+KL R+ T
Sbjct: 385 GGRGPTAAGGSNFDRAGGRDNDKGAGGASALDDTDVGGVNFNNYSRDALMRKLARTDDTT 444
Query: 475 TIAGS----AVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVP 530
T A P + ALP+
Sbjct: 445 TAANHERREVSKPKTETKALPV-------------------------------------- 466
Query: 531 TASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKD 589
+ + S C++LKNMFDP E E ++ ++++DV E K+G + HI ++ +
Sbjct: 467 --------NVNMASRCVVLKNMFDPTEEDGENWEKELEDDVRAEAEEKYGHVVHIALDPN 518
Query: 590 SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
S G +YL+F+ Q A + L+GR+F G+MI+AT +V Y + F
Sbjct: 519 SQGDIYLKFDRVQGGENAIKGLNGRYFGGRMISATPVVDAVYSSLF 564
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/393 (36%), Positives = 209/393 (53%), Gaps = 69/393 (17%)
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYV 295
EP+ D + + R+VF Q+ + RD+ FF G V D R++ DR SRRSKG+GYV
Sbjct: 243 EPK-DDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSRRSKGIGYV 301
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF + V AIALSG ++G P+ V+ +E+E+N + G T SG L
Sbjct: 302 EFRSIDLVEKAIALSGTIVMGLPINVQLTESERNKSHAGDGSLHLPPGVTA--SGAI--L 357
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNG 414
YVG+LHFN+TE ++QVFEPFG +E V L D TG KG+ FVQ+ R EDAR AL
Sbjct: 358 YVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQYKRAEDARMALEQME 417
Query: 415 QLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSAT 474
E+ GR ++V+ V ++ ++ ++ D+ GG +LNA SR LMQKL R+
Sbjct: 418 GFELAGRTLRVNTVHEKGSVRYTQTDSL-----DDSGGANLNAASRQALMQKLARTEQ-- 470
Query: 475 TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASV 534
P P A V ++P +Q
Sbjct: 471 ------------------PVVP----AEPVKPIIPQAMQ--------------------- 487
Query: 535 PIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGF 593
S +LLKNMF+P+ ET + +D D+ +DV+GEC +K+GK+ I VEKDS G
Sbjct: 488 ---------SRSVLLKNMFNPEEETEQNWDKDLADDVKGECENKYGKVLAIKVEKDSQGE 538
Query: 594 VYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
+Y++F+ +A +A + L+GRWF G+ I+A F+
Sbjct: 539 IYVKFDTVDTAKSAVQGLNGRWFGGRQISANFI 571
>gi|301108451|ref|XP_002903307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097679|gb|EEY55731.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 556
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 233/472 (49%), Gaps = 80/472 (16%)
Query: 203 ERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADE 262
ERERS E ER K+RE ++ RD RTVF Q+ K E
Sbjct: 118 ERERSTSAERAERAKQREL--------------------MELTRDHRTVFVGQLTQKVRE 157
Query: 263 RDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQ--PVM 320
+D+ F ++ GKV +V LI D+ + RSKG YVE ++ VP + L+GQ Q P+M
Sbjct: 158 KDLERFLTKTGKVENVLLIRDKFTNRSKGFAYVELSNLEDVPKVLLLNGQVPDFQVFPIM 217
Query: 321 VKPSEAEKNLVQSNSSIA-------------GASGGGTGPYSGGAR---------RLYVG 358
+K SEAEKN S+ G+ G G SGG R+Y G
Sbjct: 218 IKVSEAEKNFAAKKDSVMNGTAASGGPLSADGSGAGLAGAISGGGMSASALSAASRIYCG 277
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
NLH N+TED LR VF+ FG V V + DE G KGF F+QF+ ++A AL+ LE+
Sbjct: 278 NLHTNITEDDLRIVFQSFGEVLSVTINRDEMGRSKGFSFIQFSSPQEANFALSKGNGLEL 337
Query: 419 VGRAIKV-----SAVTDQSGLQDLGANTTGD---FDDDEGGGLSLNARSRALLMQKLDRS 470
G +++ +AV +++G+ + N TG +D+EG GLS+NA+SR+ LM KL
Sbjct: 338 AGSFLRLGPVNENAVGNRTGVSSVDNNATGGRWKLEDEEGEGLSMNAQSRSALMAKL--- 394
Query: 471 GSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVP 530
AG+ V P+ +G +A + + T Q
Sbjct: 395 ------AGNDVNL--------FPSMSGVGGYTASTAAYTNSMAATAAQRAEQ-------A 433
Query: 531 TASVPIFDTIGVPSECLLLKNMFDPKNETYE---EFDMDIKEDVEGECSKFGKLKHIFVE 587
TA + + G S C ++KNMFD E E+ ++I++DVE EC ++G + H +VE
Sbjct: 434 TALMSSSEIEGSESFCFVVKNMFDVYQEQKSGNPEWGVEIQQDVEEECGQYGSVLHTYVE 493
Query: 588 KD-SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
K+ G VY+ F ++A +A + LHGRWF + I+ ++ Q Y FP++
Sbjct: 494 KEKQGGLVYVLFGTVEAAVSAAKKLHGRWFNKRQISVRYLSSQEYVGMFPEA 545
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 231/487 (47%), Gaps = 106/487 (21%)
Query: 204 RERSRDRELKEREKERESRDNDK--ESRRPKE-KKEQVEPEVDPERDQRTVFAYQICLKA 260
R RS DR + R R+ + DK E RRP+ K+E P + ERD+RTVF Q+ +
Sbjct: 129 RTRSPDRYYRPRGDRRDRDEADKPREERRPRSPKREGTPPLSEDERDRRTVFVQQLAARL 188
Query: 261 DERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVM 320
+++ FF + G V++ +++ DR S RSKGVGYVEF + SVP AI L+GQ LLG P++
Sbjct: 189 RTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVPAAIQLTGQRLLGIPII 248
Query: 321 VKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVE 380
+ +EAEKN Q + A S P+ RLYVGN+HF++TE L+ VFEPFG +E
Sbjct: 249 AQLTEAEKNR-QVRNPEATTSNPNQIPF----HRLYVGNIHFSITESDLQNVFEPFGELE 303
Query: 381 LVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ-------SG 433
VQL +E G +G+GFVQF AR AL ++ GR I+V D+ S
Sbjct: 304 FVQLQKEEQGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTASL 363
Query: 434 LQ----------------------------------------DLGANTTGDFDDDEGGGL 453
LQ D GA DD + GG+
Sbjct: 364 LQRFHGQSHQQQFQGSAFSGAGGRGPTAAGGSNFDRAGGRDNDKGAGGASALDDTDVGGV 423
Query: 454 SLNARSRALLMQKLDRSGSATTIAGS----AVTPAVNSTALPLPTAPLLGAASAVSTLVP 509
+ N SR LM+KL R+ T A P + ALP+
Sbjct: 424 NFNNYSRDALMRKLARTDDTTVAANHERREVSKPKTETKALPV----------------- 466
Query: 510 PLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKE 569
+ + S C++LKNMFDP E E ++ ++++
Sbjct: 467 -----------------------------NVNMASRCVVLKNMFDPTEEDGENWEKELED 497
Query: 570 DVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVP 628
DV E K+G + HI ++ +S G +YL+F+ Q A + L+GR+F G+MI+AT +V
Sbjct: 498 DVRAEAEEKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRYFGGRMISATPVVD 557
Query: 629 QTYEAKF 635
Y + F
Sbjct: 558 AVYSSLF 564
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 220/411 (53%), Gaps = 26/411 (6%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 188 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 247
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
+ SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 248 KNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----HRLYV 303
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L+ VFEPFG ++ VQL +ETG KG+GFVQF AR AL +
Sbjct: 304 GNIHFSITESDLQNVFEPFGELDFVQLQREETGRSKGYGFVQFRDPNQAREALEKMNGFD 363
Query: 418 IVGRAIKVSAVTDQSG---------LQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
+ GR I+V D+ LQ G N + G G ++ S D
Sbjct: 364 LAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANVGGSSGG----NFD 419
Query: 469 RSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT---HPGQLGT 525
R+G G+ A++ T + A + + L+ L + P P +
Sbjct: 420 RAGGRDNDKGAGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPAAEPAPDEKRK 475
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHI 584
A + T + P+ T+ + S C+LL+NMFDP E E + ++++DV EC K+G + HI
Sbjct: 476 APKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHI 535
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++ ++ G +YL+F+ Q A + L+GR+F G+ I+A +V Y + F
Sbjct: 536 SLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYSSLF 586
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 158/428 (36%), Positives = 228/428 (53%), Gaps = 44/428 (10%)
Query: 220 ESRDNDKESRRPKEKKEQVEPEVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDV 278
E RD + R + V+ E+ PE RD RTVF Q+ RD+ EFFS KVRDV
Sbjct: 199 ERRDVMPFTPRYSPPRNYVDSELSPEERDARTVFCMQLARSIRPRDLEEFFSEVAKVRDV 258
Query: 279 RLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIA 338
R+I D +RRSKG+ YVEF+D+ SVP+A++L G+ LLG P++V+P+++EKN + S + +A
Sbjct: 259 RIITDSKTRRSKGIAYVEFWDLDSVPLALSLHGKRLLGAPIVVQPTQSEKNRMAS-AMLA 317
Query: 339 GASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGF 397
A GP +LYVG+LHFN+TE+ LR +FEPFG +E +QL D ET +G+GF
Sbjct: 318 TAFTQNRGPM-----KLYVGSLHFNITEEMLRGIFEPFGKIESIQLLKDPETSRSRGYGF 372
Query: 398 VQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLN 456
+ F EDA+ A+ LNG E+ GR +KV VT+ Q+ + D D+ + G+ L
Sbjct: 373 ITFYNSEDAKRAMEQLNG-FELAGRPMKVGHVTEH---QNTLFQPSLDSDELDRSGIDLG 428
Query: 457 ARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTV 516
R LM KL T + LP A + P Q T+
Sbjct: 429 TTGRLQLMAKL-----------------AEGTGMELPQ-----VAKQMLNAQPQQHQHTL 466
Query: 517 P---THPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEG 573
P Q Q + + ++C +L NMF+P E+ ++D +I++DV
Sbjct: 467 PPAMQVQQQQQQQQQQHEQQQQLASQQLIATQCFVLSNMFNPMAESDPDWDREIRDDVID 526
Query: 574 ECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITA-----TFMV 627
EC+K + HIFV+K S G VY++ +A AA +LHGR+FAGK + + M+
Sbjct: 527 ECNKHQGVVHIFVDKASGDGNVYVKCPTVAAAVAAVNSLHGRYFAGKCVVSRCLLQLCMM 586
Query: 628 PQTYEAKF 635
Q Y K
Sbjct: 587 LQCYNGKL 594
>gi|307109776|gb|EFN58013.1| hypothetical protein CHLNCDRAFT_57088 [Chlorella variabilis]
Length = 546
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 221/444 (49%), Gaps = 87/444 (19%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
+RD RTVFAY + L+A+E+++++FF +AG + D+++I D+ + RSKG Y+EF V
Sbjct: 135 DRDTRTVFAYNLPLRAEEKEIFQFFIKAGPLNDIKVITDKTTGRSKGFAYIEFQRKEDVI 194
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIA-------------------------- 338
A+AL+GQ L+GQ VMVK SEAEKNL + A
Sbjct: 195 NALALTGQVLMGQAVMVKMSEAEKNLAWEAAEQAKRQQKELERELGPGAMAAPLLPPPMP 254
Query: 339 -------GASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGH 391
G + + G RL + NL ++TE LR +FEPFG ++ + L D
Sbjct: 255 PGMPGMVGLAMPMAPMVAAGPARLALSNLPTSITETDLRPIFEPFGALDFLTLQRDTAAR 314
Query: 392 CKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLG------------ 438
G GFVQ+ L DA A NL+G L+IVG + V ++ ++ +
Sbjct: 315 PTGNGFVQYRLLSDATKAKENLSG-LDIVGHQLGVGWANVETPVEAVAIAPPPPPLPVAM 373
Query: 439 ------ANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
A+ + + GGGL L +SRA LM KL + AG V+ N +PL
Sbjct: 374 AAAEQVADQLDEPAEGTGGGLKLTGQSRAALMSKLAAN------AGLDVS---NVPQIPL 424
Query: 493 P-TAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKN 551
P AP PLV + G LG A +PT +CLLLKN
Sbjct: 425 PQVAPQQ-----------PLVPSALALEQGLLGPASPIPT-------------QCLLLKN 460
Query: 552 MFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRAL 611
MFDP ET + +D +I EDV EC K+G ++H+FV+++S GFVY++F SA AQRAL
Sbjct: 461 MFDPAEETADNWDAEIAEDVGSECQKYGPVEHVFVDRNSRGFVYVKFTAISSAANAQRAL 520
Query: 612 HGRWFAGKMITATFMVPQTYEAKF 635
HGRWFA + I A F Y F
Sbjct: 521 HGRWFAARQIAADFQFTPIYNQHF 544
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 215/417 (51%), Gaps = 73/417 (17%)
Query: 215 REKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRA-- 272
R + S D +E P E KE + + R+VF Q+ + RD+ FF
Sbjct: 3 RRRASPSYDQQQEDYNPDEPKED-------DSEARSVFVSQLAARLTARDLGYFFEDKLG 55
Query: 273 -GKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 331
G V D R++ DR SRRSKG+GYVEF + V A+ LSG ++G P+MV+ +E+E+N +
Sbjct: 56 EGTVLDSRIVTDRISRRSKGIGYVEFRSIDLVEKALGLSGTVVMGLPIMVQLTESERNRL 115
Query: 332 QSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TG 390
G P+ GA +LYVG+LHFN+TE ++QVFEPFG +E V L D TG
Sbjct: 116 HPGDGNLNLPPGVHAPH--GAMQLYVGSLHFNLTEADIKQVFEPFGDLEFVDLHRDSTTG 173
Query: 391 HCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEG 450
KG+ FVQ+ R EDA+ AL E+ GR ++V+ V ++ A T +E
Sbjct: 174 RSKGYAFVQYKRPEDAKMALEQMDGFELAGRTLRVNTVHEKG-----TARYTQQDSLEET 228
Query: 451 GGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPP 510
GG +LNA SR LMQKL R P P P+
Sbjct: 229 GGGNLNAASRQALMQKLAR------------------IETPTPAEPV------------- 257
Query: 511 LVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKED 570
+ P+ P A+Q S +L+KNMFDP+ ET ++D ++ ED
Sbjct: 258 ----SRPSIP----QAMQ---------------SRSVLMKNMFDPEEETERDWDKELAED 294
Query: 571 VEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
V+GEC K+GK++ I VEK++ G +Y++F SA A +AL+GRWF G+ I+A F+
Sbjct: 295 VKGECQEKYGKVEAIKVEKETQGEIYVKFATIDSAKEAVQALNGRWFGGRQISAVFI 351
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 214/401 (53%), Gaps = 67/401 (16%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSR 287
P+E EP+ D + + R+VF Q+ + RD+ FF G V D R++ DR SR
Sbjct: 101 PEEPYNPDEPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDRLSR 159
Query: 288 RSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGP 347
RSKG+GYVEF + V A+ALSG ++G P+MV+ +E+E+N + G T
Sbjct: 160 RSKGIGYVEFRTIDHVEKALALSGTVVMGLPIMVQLTESERNKLHPGDGSLNLPPGVTA- 218
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDA 406
S GA LYVG+LHFN+TE ++QVFEPFG +E V L D TG KG+ FVQ+ R EDA
Sbjct: 219 -SHGA-ILYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDA 276
Query: 407 RNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQK 466
R AL E+ GR ++V+ V ++ A T DE GG +LNA SR LMQK
Sbjct: 277 RMALEQMEGFELAGRTLRVNTVHEKG-----TARYTQQDSLDEAGGGNLNAASRQALMQK 331
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L R+ A T P+ + +P A
Sbjct: 332 LART-------------------------------EAPPTFTEPVARPNIP-------QA 353
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIF 585
+Q S +LLKNMFDP+ ET ++D ++ +DV+ EC +K+GK++ I
Sbjct: 354 MQ---------------SRSVLLKNMFDPEEETERDWDKELADDVKVECENKYGKVEAIK 398
Query: 586 VEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
VE+++ G +YL+F++ +SA A + L+GRWF G+ ++A F+
Sbjct: 399 VERETQGEIYLKFDSIESAKQAIQGLNGRWFGGRQVSAAFI 439
>gi|221041852|dbj|BAH12603.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 209/364 (57%), Gaps = 32/364 (8%)
Query: 255 QICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ YVEF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 315 LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFE 374
LG P++V+ S+AEKN A A S G RLYVG+LHFN+TED LR +FE
Sbjct: 62 LGVPIIVQASQAEKNR-------AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFE 114
Query: 375 PFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQS 432
PFG +E +QL +D ETG KG+GF+ F+ E A+ AL LNG E+ GR +KV VT+++
Sbjct: 115 PFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT 173
Query: 433 GLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
A++ D D+ E G+ L R LM +L G + PA AL +
Sbjct: 174 DASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAEG------TGLQIPPAAQQ-ALQM 224
Query: 493 PTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV-PTASVPIFDTIGVPSECLLLKN 551
+ GA + S ++ + + T L A V P A ++C L N
Sbjct: 225 SGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLA-----------TQCFQLSN 273
Query: 552 MFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRA 610
MF+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +A AA A
Sbjct: 274 MFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNA 333
Query: 611 LHGR 614
LHGR
Sbjct: 334 LHGR 337
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 224/419 (53%), Gaps = 31/419 (7%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P+ ++ EP D ERD+RT+F Q+ + +++ FF + G V++ +++ DR S RSK
Sbjct: 163 PRSRERTPEPTED-ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSK 221
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
GVGYVEF SV AI L+GQ LLG P++ + +EAEKN Q+ + A + P+
Sbjct: 222 GVGYVEFKSEDSVAPAIQLTGQKLLGIPIIAQLTEAEKNR-QARNPEASSGNNHAAPF-- 278
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
RLYVGN+HF++TE L+ VFEPFG +E VQL DETG +G+GFVQF AR AL
Sbjct: 279 --HRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREAL 336
Query: 411 NLNGQLEIVGRAIKVSAVTDQSG-------LQDLGANT---TGDFDDDEGG-GLSLNARS 459
++ GRAI+V D+ +Q GAN G GG G+ S
Sbjct: 337 EKMNGFDLAGRAIRVGLGNDKFTPDSNAQRMQSQGANQHNFQGSLFSGHGGRGVQAGGTS 396
Query: 460 RALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTH 519
DR+G + G+ + A++ T + A + + L+ L + P+
Sbjct: 397 ------NFDRAGGRDSEKGAGAS-ALDDTDV----AGVNFNNYSRDALMRKLARTDEPSE 445
Query: 520 PGQ--LGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS- 576
P L+ T + P+ + + S C++L+NMFDP E E + ++++DV EC
Sbjct: 446 PAADDQQKVLRPKTEAKPLPVNVNMASRCVMLRNMFDPNEEEGEAWIKELEDDVRAECED 505
Query: 577 KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
K+G + HI ++ +S G +YL+F+ Q A + L+GR+F G+ ITA +V Y + F
Sbjct: 506 KYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITAQPVVDAVYSSLF 564
>gi|388517761|gb|AFK46942.1| unknown [Lotus japonicus]
Length = 175
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 142/205 (69%), Gaps = 31/205 (15%)
Query: 434 LQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLP 493
+Q+ G N DDDEGGGLSLNA SRA LMQKLDRSG+ ++ G AVN+T+L LP
Sbjct: 1 MQEAGGNAGDF-DDDEGGGLSLNASSRASLMQKLDRSGTTPSMVGFLGDSAVNNTSLNLP 59
Query: 494 TAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMF 553
LQ+PTA++P DTIGVPSECL+LKNMF
Sbjct: 60 VG------------------------------GLQIPTATIPSVDTIGVPSECLMLKNMF 89
Query: 554 DPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHG 613
DPK ET +FD+DIKEDVE ECSKFGKLKHI+V+K SAGFVYLRFE TQ+A AQRALHG
Sbjct: 90 DPKAETEPDFDLDIKEDVEAECSKFGKLKHIYVDKKSAGFVYLRFEATQAAIGAQRALHG 149
Query: 614 RWFAGKMITATFMVPQTYEAKFPDS 638
RWFAGKMIT +FMVPQ+YE +FP+S
Sbjct: 150 RWFAGKMITVSFMVPQSYEDRFPES 174
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 224/421 (53%), Gaps = 24/421 (5%)
Query: 226 KESRRPKEKKEQVEPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
K S K + + EP++ + ERD+RTVF Q+ + +++ FF +AG V+D +++ DR
Sbjct: 182 KRSLSAKRRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDR 241
Query: 285 NSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG 344
S RSKGVGYVEF + SVP+AI L+GQ LLG P++ + +EAEKN N+ +
Sbjct: 242 VSGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARNTEGHVSGNQN 301
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLE 404
+ P+ RLYVGN+HF++TE L+ VFEPFG ++ VQL DE G +G+GFVQF
Sbjct: 302 SIPF----HRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGRSRGYGFVQFRDPN 357
Query: 405 DARNALNLNGQLEIVGRAIKVSAVTDQ------SGLQDLGANTTGDFDDDEGGGLSLNAR 458
AR AL ++ GR I+V D+ + L L A + +GG + A
Sbjct: 358 QAREALEKMNGFDLAGRPIRVGLGNDKFSSDPATNLMRLQAQGQQNSLYGQGGRGAATA- 416
Query: 459 SRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT 518
L DR+G G A++ T + A + + L+ L + P
Sbjct: 417 ----LGGNFDRAGGRDNDKGVGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPA 468
Query: 519 HPGQLGTALQVPTA---SVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC 575
+ P A + P+ ++ + S C+LL+NMFDP E + + ++++DV EC
Sbjct: 469 ADTTADDKRKAPKARPEAKPLPVSVNMASRCVLLRNMFDPTEEEGDSWVKELEDDVRAEC 528
Query: 576 S-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
K+G + HI ++ ++ G +YL+F+ Q A + L+GR+F G+ ITA +V Y +
Sbjct: 529 EEKYGHVVHIALDPNAQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITAQPVVDAVYSSL 588
Query: 635 F 635
F
Sbjct: 589 F 589
>gi|428174818|gb|EKX43711.1| hypothetical protein GUITHDRAFT_163728 [Guillardia theta CCMP2712]
Length = 501
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 219/400 (54%), Gaps = 57/400 (14%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
+RD RT+F Q+ KADERD+++FFS AGKV DVR+I D +RRSKG+ YVEF
Sbjct: 150 DRDMRTIFVAQVARKADERDLFQFFSEAGKVVDVRIIKDTQTRRSKGIAYVEFEKQEQCV 209
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
A+ SGQ L G PV+V+ S+AEKN Q+ A +G P +L V NLH ++
Sbjct: 210 AAVQKSGQLLCGFPVVVQASQAEKN--QAARLAAQVAGELDLP-----AKLQVDNLHMDI 262
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAI 423
ED L+ +F PFG V V++ E G G G V+F L+DA+ A+ +LNG ++ G+A+
Sbjct: 263 AEDDLQTLFSPFGKVLSVRIN-KEHGRSTGKGVVEFKTLQDAQKAVAHLNG-FDLAGKAL 320
Query: 424 KV----SAVTDQSG-LQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
V SA + +G + G T DD+E GG+ ++A+SR LMQKL R + T
Sbjct: 321 NVRIIQSAGSGYTGSMSSSGGPATEMLDDNEIGGVHVSAQSRHSLMQKLARGDAQLT--- 377
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFD 538
SAV ++ S AL P+ P +P Q
Sbjct: 378 SAVPNSLMSGALQ-PSKP----------------ANAIPNGQSQ---------------- 404
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVE-KDSAGFVYL 596
PS ++L NMFDP ET +F ++I++DV+ EC +KFG++ + + K G VY+
Sbjct: 405 ----PSVFMVLVNMFDPAKETEPDFHVEIQDDVKEECEAKFGRVIQVVADRKHPNGLVYV 460
Query: 597 RFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFP 636
RF++T +A AQ L GR+FAGK I+A ++ T+EA P
Sbjct: 461 RFDSTDTAQKAQAGLQGRFFAGKQISAIYLAQGTFEANIP 500
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/411 (34%), Positives = 218/411 (53%), Gaps = 26/411 (6%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 188 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 247
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
+ SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 248 KNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----HRLYV 303
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L+ VFEPFG ++ VQL +E G KG+GFVQF AR AL +
Sbjct: 304 GNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGFD 363
Query: 418 IVGRAIKVSAVTDQSG---------LQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
+ GR I+V D+ LQ G N + G G + S D
Sbjct: 364 LAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANTGGSSGG----NFD 419
Query: 469 RSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT---HPGQLGT 525
R+G G+ A++ T + A + + L+ L + P P +
Sbjct: 420 RAGGRDNDKGAGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPAAEPAPDEKRK 475
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHI 584
A + T + P+ T+ + S C+LL+NMFDP E E + ++++DV EC K+G + HI
Sbjct: 476 APKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHI 535
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++ ++ G +YL+F+ Q A + L+GR+F G+ I+A +V Y + F
Sbjct: 536 SLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYSSLF 586
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 227/431 (52%), Gaps = 39/431 (9%)
Query: 222 RDNDKESRRPKEKKEQVEPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL 280
RD+D R + K+E+ P++ + ERD+RTVF Q+ + R++ EFF R G V + ++
Sbjct: 154 RDDD----RRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQI 209
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGA 340
+ DR S+RSKGVGYVEF + SV A+ L+GQ LLG PV+V+ +EAEKN N +G
Sbjct: 210 VKDRISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGP 269
Query: 341 SGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQF 400
P S RLYVGN+HFN+TE L+ VFEPFG +E VQL DE G +G+GFVQF
Sbjct: 270 H-----PNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDENGRSRGYGFVQF 324
Query: 401 ARLEDARNALNLNGQLEIVGRAIKVSAVTDQ-------------SGLQDLGANTTGDFDD 447
AR AL ++ GR I+V D+ SG N G
Sbjct: 325 RDAGQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNQQNPNFQGSAFS 384
Query: 448 DEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTL 507
GG N+ + +++G A+ + + V VN + L
Sbjct: 385 GSGGRGPQNSTFDRAGGRDNEKTGGASALDDTDVA-GVNFNNY------------SRDAL 431
Query: 508 VPPLVQG--TVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDM 565
+ L + + PT+ + L+ T + P+ + + S C++L NMFDP+ E ++
Sbjct: 432 MRKLARTDDSAPTNGHEERQVLKPKTETKPLPVNVNMASRCVVLHNMFDPEEEEGTDWVK 491
Query: 566 DIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITAT 624
++++DV E SK+G + HI V+ +S G +YL+F+ Q A + L+GR+F G+MI A+
Sbjct: 492 ELEDDVRQEAESKYGHVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDAS 551
Query: 625 FMVPQTYEAKF 635
+V Y + F
Sbjct: 552 PVVDAVYSSLF 562
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 224/411 (54%), Gaps = 31/411 (7%)
Query: 240 PEVDP-ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
PE++ ERD+RT+F Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 168 PELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFK 227
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
+ SV AI L+GQ LLG P++ + +EAEKN Q+ + A + P+ RLYVG
Sbjct: 228 NEESVAPAIQLTGQKLLGIPIIAQLTEAEKNR-QARNPEASSGSNHAAPF----HRLYVG 282
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
N+HF++TE L+ VFEPFG +E VQL DETG +G+GFVQF AR AL ++
Sbjct: 283 NIHFSITESDLQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNGFDL 342
Query: 419 VGRAIKVSAVTDQSG-------LQDLGA---NTTGDFDDDEGG-GLSLNARSRALLMQKL 467
GRAI+V D+ +Q GA N G +GG G+ +A
Sbjct: 343 AGRAIRVGLGNDKFTPESNAQRMQSQGASQQNFQGSMFSGQGGRGV------QAGGTNNF 396
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQ--LGT 525
DR+G + G+ + A++ T + A + + L+ L + P+ P
Sbjct: 397 DRAGGRESEKGAGAS-ALDDTDV----AGVNFNNYSRDALMRKLARTDEPSEPSADDKQK 451
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHI 584
L+ T + P+ + + S C+LL+NMFDP E E + ++++DV EC K+G + HI
Sbjct: 452 ILRPKTETKPLPVNVNMASRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHI 511
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++ +S G +YL+F+ Q A + L+GR+F G+ ITA +V Y + F
Sbjct: 512 ALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITAQPVVDAVYSSLF 562
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 219/452 (48%), Gaps = 92/452 (20%)
Query: 228 SRRPKEKKEQVEPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
S PK + + EP++ + ERD+RTVF Q+ + +++ FF +AG V+D +++ DR S
Sbjct: 173 SPSPKPRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVS 232
Query: 287 RRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG 346
RSKGVGYVEF + SVP+AI L+GQ LLG P++ + +EAEKN N+ + +
Sbjct: 233 GRSKGVGYVEFKNEESVPVAIQLTGQKLLGIPIIAQFTEAEKNKAARNAEGHVSGNQNSI 292
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDA 406
P+ RLYVGN+HF++TE L+ VFEPFG ++ VQL DE G +G+GFVQF A
Sbjct: 293 PF----HRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGRSRGYGFVQFRDPNQA 348
Query: 407 RNALNLNGQLEIVGRAIKVS---------AVTDQSGLQ---------------------- 435
R AL ++ GR I+V + T+ LQ
Sbjct: 349 REALEKMNGFDLAGRPIRVGLGNDKFSSDSATNLMRLQSQGQQGSLYGQGGRGTQAASNF 408
Query: 436 --------DLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRS---GSATTIAGSAVTPA 484
D G DD + G++ N SR LM+KL R+ + T+ P
Sbjct: 409 DRAGGRDNDKGIGGASALDDTDVAGVNFNNYSRDALMRKLARTDEPAADTSTDDKRKAPK 468
Query: 485 VNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPS 544
+ A PLP ++ + S
Sbjct: 469 ARTEAKPLPV--------------------------------------------SVNMAS 484
Query: 545 ECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQS 603
C+LL+NMFDP E + + ++++DV EC K+G + HI ++ ++ G +YL+F+ Q
Sbjct: 485 RCVLLRNMFDPTEEEGDSWVKELEDDVRAECEEKYGHVVHIALDPNTQGDIYLKFDRVQG 544
Query: 604 AFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
A + L+GR+F G+ ITA +V Y + F
Sbjct: 545 GENAIKGLNGRFFGGRQITAQPVVDAVYSSLF 576
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 224/421 (53%), Gaps = 24/421 (5%)
Query: 226 KESRRPKEKKEQVEPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
K S K + + EP++ + ERD+RTVF Q+ + +++ FF +AG V+D +++ DR
Sbjct: 180 KRSLSAKRRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDR 239
Query: 285 NSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG 344
S RSKGVGYVEF + SVP+AI L+GQ LLG P++ + +EAEKN N+ +
Sbjct: 240 VSGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARNTEGHVSGNQN 299
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLE 404
+ P+ RLYVGN+HF++TE L+ VFEPFG ++ VQL DE G +G+GFVQF
Sbjct: 300 SIPF----HRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGRSRGYGFVQFRDPN 355
Query: 405 DARNALNLNGQLEIVGRAIKVSAVTDQ------SGLQDLGANTTGDFDDDEGGGLSLNAR 458
AR AL ++ GR I+V D+ + L L A + +GG + A
Sbjct: 356 QAREALEKMNGFDLAGRPIRVGLGNDKFSSDPATNLMRLQAQGQQNSLYGQGGRGAATA- 414
Query: 459 SRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT 518
L DR+G G A++ T + A + + L+ L + P
Sbjct: 415 ----LGGNFDRAGGRDNDKGVGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPA 466
Query: 519 HPGQLGTALQVPTA---SVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC 575
+ P A + P+ ++ + S C+LL+NMFDP E + + ++++DV EC
Sbjct: 467 ADTTADDKRKAPKARPEAKPLPVSVNMASRCVLLRNMFDPTEEEGDSWVKELEDDVRAEC 526
Query: 576 S-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
K+G + HI ++ ++ G +YL+F+ Q A + L+GR+F G+ ITA +V Y +
Sbjct: 527 EEKYGHVVHIALDPNAQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITAQPVVDAVYSSL 586
Query: 635 F 635
F
Sbjct: 587 F 587
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 221/411 (53%), Gaps = 31/411 (7%)
Query: 240 PEVDP-ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
PE++ ERD+RT+F Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 168 PELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFK 227
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
+ SV AI L+GQ LLG P++ + +EAEKN Q+ + A + P+ RLYVG
Sbjct: 228 NEDSVAPAIQLTGQKLLGIPIIAQLTEAEKNR-QARNPDASSGNNHAAPF----HRLYVG 282
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
N+HF++TE+ L+ VFEPFG +E VQL DETG +G+GFVQF AR AL ++
Sbjct: 283 NIHFSITENDLQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNGFDL 342
Query: 419 VGRAIKVSAVTDQSG-------LQDLGANTTG----DFDDDEGGGLSLNARSRALLMQKL 467
GRAI+V D+ LQ GAN F G G+ S
Sbjct: 343 AGRAIRVGLGNDKFTPDSSAQRLQSQGANQQNFQGSSFSGHGGRGIQAGGTS------NF 396
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQ--LGT 525
DR+G + G+ + A++ T + A + + L+ L + P+
Sbjct: 397 DRAGGRDSEKGAGAS-ALDDTDV----AGVNFNNYSRDALMRKLARTDEPSESSADDKQK 451
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHI 584
L+ T + P+ + + S C++L+NMFDP E E + ++++DV EC K+G + HI
Sbjct: 452 VLRPKTETKPLPVNVNMASRCVMLRNMFDPGEEEGESWIKELEDDVRAECEEKYGHVVHI 511
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++ +S G +YL+F+ Q A + L+GR+F GK ITA +V Y + F
Sbjct: 512 ALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGKQITAQPVVDAVYSSLF 562
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 223/419 (53%), Gaps = 31/419 (7%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P+ ++ EP D ERD+RT+F Q+ + +++ FF + G V++ +++ DR S RSK
Sbjct: 164 PRSRERTPEPTED-ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSK 222
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
GVGYVEF +V AI L+GQ LLG P++ + +EAEKN Q+ + A + P+
Sbjct: 223 GVGYVEFKSEDAVAPAIQLTGQKLLGIPIIAQLTEAEKNR-QARNPEASSGNNHAAPF-- 279
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
RLYVGN+HF++TE L+ VFEPFG +E VQL DETG +G+GFVQF AR AL
Sbjct: 280 --HRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREAL 337
Query: 411 NLNGQLEIVGRAIKVSAVTDQSG-------LQDLGANT---TGDFDDDEGG-GLSLNARS 459
++ GRAI+V D+ +Q GAN G GG G+ S
Sbjct: 338 EKMNGFDLAGRAIRVGLGNDKFTPDSNAQRMQSQGANQHNFQGSLFSGHGGRGVQAGGTS 397
Query: 460 RALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTH 519
DR+G + G+ + A++ T + A + + L+ L + P
Sbjct: 398 ------NFDRAGGRDSEKGAGAS-ALDDTDV----AGVNFNNYSRDALMRKLARTDEPAE 446
Query: 520 PGQ--LGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS- 576
P L+ T + P+ + + S C++L+NMFDP E E + ++++DV EC
Sbjct: 447 PAADDQQKVLRPKTEAKPLPVNVNMASRCVMLRNMFDPNEEEGEAWIKELEDDVRAECED 506
Query: 577 KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
K+G + HI ++ +S G +YL+F+ Q A + L+GR+F G+ ITA +V Y + F
Sbjct: 507 KYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITAQPVVDAVYSSLF 565
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 226/431 (52%), Gaps = 39/431 (9%)
Query: 222 RDNDKESRRPKEKKEQVEPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL 280
RD+D R + K+E+ P++ + ERD+RTVF Q+ + R++ EFF R G V + ++
Sbjct: 154 RDDD----RRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQI 209
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGA 340
+ DR S+RSKGVGYVEF + SV A+ L+GQ LLG PV+V+ +EAEKN N +G
Sbjct: 210 VKDRISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGP 269
Query: 341 SGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQF 400
P S RLYVGN+HFN+TE L+ VFEPFG +E VQL DE G +G+GFVQF
Sbjct: 270 H-----PNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDENGRSRGYGFVQF 324
Query: 401 ARLEDARNALNLNGQLEIVGRAIKVSAVTDQ-------------SGLQDLGANTTGDFDD 447
AR AL ++ GR I+V D+ SG N G
Sbjct: 325 RDAGQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNQQNPNFQGSAFS 384
Query: 448 DEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTL 507
GG N+ + +++G A+ + + V VN + L
Sbjct: 385 GSGGRGPQNSTFDRAGGRDNEKTGGASALDDTDVA-GVNFNNY------------SRDAL 431
Query: 508 VPPLVQG--TVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDM 565
+ L + + PT+ + L+ + P+ + + S C++L NMFDP+ E ++
Sbjct: 432 MRKLARTDDSAPTNGHEERQVLKPKMETKPLPVNVNMASRCVVLHNMFDPEEEEGTDWVK 491
Query: 566 DIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITAT 624
++++DV E SK+G + HI V+ +S G +YL+F+ Q A + L+GR+F G+MI A+
Sbjct: 492 ELEDDVRQEAESKYGHVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDAS 551
Query: 625 FMVPQTYEAKF 635
+V Y + F
Sbjct: 552 PVVDAVYSSLF 562
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 226/477 (47%), Gaps = 107/477 (22%)
Query: 213 KEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRA 272
K RE R + + SR PK +E P + ERD+RTVF Q+ + +++ FF +
Sbjct: 158 KPREDRRTRNEGRRASRSPK--RETTPPLTEDERDRRTVFVQQLAARLRTKELIAFFEKV 215
Query: 273 GKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQ 332
G V++ +++ DR S RSKGVGYVEF + SVP AI L+GQ LLG P++ + +EAEKN Q
Sbjct: 216 GPVKEAQIVKDRVSGRSKGVGYVEFKNEESVPAAIQLTGQKLLGIPIIAQLTEAEKNR-Q 274
Query: 333 SNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHC 392
+ A +S P+ RLYVGN+HF++TE L+ VFEPFG +E VQL +E G
Sbjct: 275 VRNPEATSSNPNQIPF----HRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKEEQGRS 330
Query: 393 KGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ--------------------- 431
+G+GFVQF AR AL ++ GR I+V D+
Sbjct: 331 RGYGFVQFRDPSQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTASLLQRFQGQSHQQQ 390
Query: 432 ------SGLQDLG--ANTTGDF------------------DDDEGGGLSLNARSRALLMQ 465
SG G A G+F DD + GG++ N SR LM+
Sbjct: 391 FQGSAFSGAGGRGPQAANGGNFDRAGGRDNEKSSGGASALDDTDVGGVNFNNYSRDALMR 450
Query: 466 KLDRSG-SATTIAG-----SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTH 519
KL R+ A G V P + ALP+
Sbjct: 451 KLARTDEPAPATKGRDERREVVKPKTEAKALPV--------------------------- 483
Query: 520 PGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKF 578
+ + S C++LKNMFDP E + ++ ++++DV E K+
Sbjct: 484 -------------------NVNMASRCVVLKNMFDPAEEEGDSWEKELEDDVRAEAEEKY 524
Query: 579 GKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
G + HI ++ +S G +YL+F+ Q A + L+GR+F G+MI+AT +V Y + F
Sbjct: 525 GHVVHISLDPNSQGDIYLKFDRVQGGENAIKGLNGRYFGGRMISATPVVDAVYSSLF 581
>gi|328770116|gb|EGF80158.1| hypothetical protein BATDEDRAFT_11758 [Batrachochytrium
dendrobatidis JAM81]
Length = 389
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 205/378 (54%), Gaps = 48/378 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + ++ +FF GKVRD L++D+++ RSKGV YVEFY+V +V
Sbjct: 36 ERDKRTVFCMQLAARLRSHELVKFFEACGKVRDASLVIDKHTGRSKGVAYVEFYEVEAVS 95
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
A+ ++GQ LLG P++V+ +EAE+N V A + A R+YVG+L +++
Sbjct: 96 KALEMTGQKLLGIPIIVQLTEAERNRV--------ALQAASKTVDTAASRIYVGSLDYSL 147
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQL--EIVGR 421
TE + F+ FG +E + + +D ETGH KG+ FVQ+ + N L Q+ ++
Sbjct: 148 TEQDVANAFQGFGPIEFINIHMDKETGHSKGYAFVQYVKDAWFLNIFILKLQIRVNLISE 207
Query: 422 AIKVSAVTDQSGLQDLGANT-TGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSA 480
+ + VT+ S + N T + DD E G +N+ SRA LM KL R
Sbjct: 208 KSQSAPVTNASNVGIASENIATFNMDDGEMEGFQMNSLSRAELMAKLAR----------- 256
Query: 481 VTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTI 540
T P L SA ++ + T A+ VPT
Sbjct: 257 -------------TEPTLSKTSA--SVAAIIFTNTYFVFDSSTKPAVVVPT--------- 292
Query: 541 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFEN 600
+ + C+LLKNMF+P+NE + +I+EDV+ EC+KFGK+ HI V+ +S G VYL+F++
Sbjct: 293 -METRCVLLKNMFNPENEVESNWVQEIEEDVKEECTKFGKILHISVDPESHGHVYLKFDS 351
Query: 601 TQSAFAAQRALHGRWFAG 618
S+ AA +ALHGR+FAG
Sbjct: 352 LVSSQAAVKALHGRFFAG 369
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 216/412 (52%), Gaps = 25/412 (6%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K++ EP D ERD+RTVF Q+ + R++ +FF + G V D +++ DR S RSKGVG
Sbjct: 222 KRKTPEP-TDDERDRRTVFVQQLAARLRSRELRDFFEQVGPVVDAQIVKDRVSGRSKGVG 280
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
YVEF D SV AI L+GQ LLG P++ + +EAEKN Q+ ++ A+ P+
Sbjct: 281 YVEFKDEESVQKAIGLTGQKLLGIPIIAQLTEAEKNR-QARTTEGTATQSNGVPF----H 335
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLN 413
RLYVGN+HF++TE L+ VFEPFG +E QL +E G KG+GFVQF A+ AL
Sbjct: 336 RLYVGNIHFSITEADLKNVFEPFGELEFAQLQKEENGRSKGYGFVQFIDPAQAKEALEKM 395
Query: 414 GQLEIVGRAIKVSAVTD-------QSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQK 466
E+ GR I+V D Q+ L G++T + GL + A
Sbjct: 396 NGFELAGRPIRVGLGNDKFTTESTQTLLVKFGSHTPSAQKGSQFSGLGGRG-AHAGGTGN 454
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
DR +A + + A++ T +G + L++ T + A
Sbjct: 455 FDRPAAARDVDKTGGASALDDTD--------VGGVDFHNYSREKLMKQLARTDEPEQKIA 506
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIF 585
+ F+ S C+L+KNM++ E+ + ++K+DV+ EC K+GK+ HI
Sbjct: 507 PKTQVKKPATFEQPSA-SRCVLIKNMYNQNEESEPGWQKELKDDVKSECEEKYGKVVHID 565
Query: 586 VEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFP 636
+ D+ G VY++F+ Q A + L+GRWFAG+MITA ++V Y FP
Sbjct: 566 LALDNNDGEVYVKFDRVQGGENAFKGLNGRWFAGRMITAQYVVDAVYTMNFP 617
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 204/390 (52%), Gaps = 66/390 (16%)
Query: 249 RTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
R+VF Q+ + RD+ FF G V D R++ DR SRRSKG+GYVEF + V
Sbjct: 254 RSVFVSQLAARLTARDLGYFFEDKLGEGAVMDSRIVTDRISRRSKGIGYVEFRTIELVEK 313
Query: 306 AIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMT 365
AI LSG ++G P+ V+ +EAE+N + S+ G + G +LYVG+LHFN+T
Sbjct: 314 AIGLSGTIVMGLPIQVQHTEAERNRTHAGDSLHLPPGVSS---HHGGMQLYVGSLHFNLT 370
Query: 366 EDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
E +RQVFEPFG +E V L D TG KG+ FVQ+ R EDA+ AL E+ GR ++
Sbjct: 371 ESDIRQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRGEDAKMALEQMEGFELAGRTLR 430
Query: 425 VSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPA 484
V+ V ++ ++ T + DD GGG +LNA SR LMQKL R+ PA
Sbjct: 431 VNTVHEKGNVR----YTPQESLDDTGGG-NLNAASRQALMQKLARTDQ----------PA 475
Query: 485 VNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPS 544
P+++ +P + S
Sbjct: 476 ARPQ---------------------PIMKPNIPQ----------------------SMQS 492
Query: 545 ECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQS 603
+ +LLKNMF+P+ ET ++D ++ +DV+ E K+G + I VE++S G +Y++F++ +S
Sbjct: 493 KSVLLKNMFNPEEETERDWDKELADDVKNEVEDKYGDVNFIKVERESQGEIYVKFDSIES 552
Query: 604 AFAAQRALHGRWFAGKMITATFMVPQTYEA 633
A A LHGRWF G+ ++A F+ +A
Sbjct: 553 AKKAIEGLHGRWFGGRQVSAAFISDAILQA 582
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 222/445 (49%), Gaps = 85/445 (19%)
Query: 238 VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
+ P + ERD+RTVF Q+ + R++ +FF +AG V + +++ DR S RSKGVGYVEF
Sbjct: 198 MPPLTEDERDRRTVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGVGYVEF 257
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG-PYSGGARRLY 356
SV A+ L+GQ LLG PV+V+ +EAEKN +++ A ++G TG P+ RLY
Sbjct: 258 RSEESVTAALQLTGQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGVPF----HRLY 313
Query: 357 VGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQL 416
VGN+HF++TE LR VFEPFG +E VQL D+TG +G+GFVQF + AR AL
Sbjct: 314 VGNIHFSITESDLRNVFEPFGELEFVQLQKDDTGRSRGYGFVQFRDSDQAREALEKMNGF 373
Query: 417 EIVGRAIKVSAVTDQ---------------------------SGLQDLGANTT------- 442
++ GR I+V D+ SG G N +
Sbjct: 374 DLAGRPIRVGLGNDKFTPESTANLMKGFQGRDQQQQHQGSAFSGSGGRGQNASNFDRAGG 433
Query: 443 ---------GDFDDDEGGGLSLNARSRALLMQKLDRS--GSATTIAGSAVTPAVNSTALP 491
G DD + G++ N SR LM+KL R+ SA G + + A + P
Sbjct: 434 RDNDKGSGAGALDDTDVAGVNFNNYSRDALMRKLARADDSSANGTGGGSTSAAADEQQRP 493
Query: 492 LPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKN 551
+ L+ T + P+ + + S C++L N
Sbjct: 494 I----------------------------------LKPRTEAKPLPVNVNMASRCVVLHN 519
Query: 552 MFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRA 610
MFD E EE+ ++++DV E K+G + H+ ++ +S G +YL+F+ Q A +
Sbjct: 520 MFDTSEEEGEEWIKELEDDVRQEAEEKYGHVVHVALDPNSIGDIYLKFDKVQGGENAIKG 579
Query: 611 LHGRWFAGKMITATFMVPQTYEAKF 635
L+GR+F G+MITA +V Y + F
Sbjct: 580 LNGRYFGGRMITAAPVVDAVYSSLF 604
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 213/401 (53%), Gaps = 19/401 (4%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF D SVP
Sbjct: 165 ERDKRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDESSVP 224
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+AI L+GQ LLG P++ + +EAEKN Q+ + A + + P+ RLYVGN+HF++
Sbjct: 225 LAIQLTGQKLLGIPIIAQLTEAEKNR-QARNPEASSGQSASAPF----HRLYVGNIHFSI 279
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TE+ ++ VFEPFG +E VQL DETG +G+GFVQF AR AL ++ GR I+
Sbjct: 280 TENDIQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIR 339
Query: 425 VSAVTDQ-------SGLQDL-GANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTI 476
V D+ + LQ G F G DR+G T
Sbjct: 340 VGLGNDKFTPESTANLLQRFQGREQNQQFQGSLFSGHGGRGAQAGGTPSNFDRAGGRDTD 399
Query: 477 AGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPG-QLGTALQVPTASVP 535
G+ A++ T + A + + L+ L + P + L+ T P
Sbjct: 400 KGTGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPEPSADEKSQPLRPKTEPKP 455
Query: 536 IFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFV 594
+ + + S C+LL+NMFDP E E + ++++DV EC K+G + HI ++ +S G +
Sbjct: 456 LPVNVNMASRCVLLRNMFDPAEEEGEAWIKELEDDVRAECEEKYGHVVHISLDPNSQGDI 515
Query: 595 YLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
YL+F+ Q A + L+GR+F G+ I+A +V Y + F
Sbjct: 516 YLKFDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYSSLF 556
>gi|119494703|ref|XP_001264168.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
gi|119412330|gb|EAW22271.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
Length = 566
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 218/411 (53%), Gaps = 31/411 (7%)
Query: 240 PEVDP-ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
PE++ ERD+RT+F Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 166 PELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFK 225
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
SV AI L+GQ LLG P++ + +EAEKN Q+ + A + P+ RLYVG
Sbjct: 226 SEESVAPAIQLTGQKLLGIPIIAQLTEAEKNR-QARNPEASSGHNHAAPF----HRLYVG 280
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
N+HF++TE+ L+ VFEPFG +E VQL DE G KG+GFVQF AR AL ++
Sbjct: 281 NIHFSITENDLQNVFEPFGELEFVQLQKDEAGRSKGYGFVQFRDPNQAREALEKMNGFDL 340
Query: 419 VGRAIKVSAVTDQSG-------LQDLGANTTG----DFDDDEGGGLSLNARSRALLMQKL 467
GRAI+V D+ Q GAN F G G+ S
Sbjct: 341 AGRAIRVGLGNDKFTPDSSAQRSQSHGANQPNFQGSSFSGQGGRGIQAGGTS------NF 394
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQ--LGT 525
DR+G + G+ + A++ T + A + + L+ L + P P
Sbjct: 395 DRAGGRDSEKGAGAS-ALDDTDV----AGVNFNNYSRDALMRKLARTDEPAEPAADDKQK 449
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHI 584
L+ T + P+ + + S C+LL+NMFDP E E + ++++DV EC K+G + HI
Sbjct: 450 VLRPKTETKPLPVNVNMASRCVLLRNMFDPAEEEGEAWIKELEDDVRAECEDKYGHVVHI 509
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++ +S G +YL+F+ Q A + L+GR+F G+ ITA +V Y + F
Sbjct: 510 ALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITAQPVVDAVYSSLF 560
>gi|70996384|ref|XP_752947.1| RNA splicing factor (Pad-1) [Aspergillus fumigatus Af293]
gi|66850582|gb|EAL90909.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus Af293]
gi|159131701|gb|EDP56814.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus A1163]
Length = 566
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 218/411 (53%), Gaps = 31/411 (7%)
Query: 240 PEVDP-ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
PE++ ERD+RT+F Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 166 PELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFK 225
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
SV AI L+GQ LLG P++ + +EAEKN Q+ + A + P+ RLYVG
Sbjct: 226 SEESVAPAIQLTGQKLLGIPIIAQLTEAEKNR-QARNPEASSGHNHAAPF----HRLYVG 280
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
N+HF++TE+ L+ VFEPFG +E VQL DE G KG+GFVQF AR AL ++
Sbjct: 281 NIHFSITENDLQNVFEPFGELEFVQLQKDEAGRSKGYGFVQFRDPNQAREALEKMNGFDL 340
Query: 419 VGRAIKVSAVTDQSG-------LQDLGANTTG----DFDDDEGGGLSLNARSRALLMQKL 467
GRAI+V D+ Q GAN F G G+ S
Sbjct: 341 AGRAIRVGLGNDKFTPDSSAQRSQSHGANQPNFQGSSFSGQGGRGIQAGGTS------NF 394
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQ--LGT 525
DR+G + G+ + A++ T + A + + L+ L + P P
Sbjct: 395 DRAGGRDSEKGAGAS-ALDDTDV----AGVNFNNYSRDALMRKLARTDEPAEPAADDKQK 449
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHI 584
L+ T + P+ + + S C+LL+NMFDP E E + ++++DV EC K+G + HI
Sbjct: 450 VLRPKTETKPLPVNVNMASRCVLLRNMFDPAEEEGEAWIKELEDDVRAECEDKYGHVVHI 509
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++ +S G +YL+F+ Q A + L+GR+F G+ ITA +V Y + F
Sbjct: 510 ALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITAQPVVDAVYSSLF 560
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 216/444 (48%), Gaps = 91/444 (20%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K+E P + ERD+RTVF Q+ + R++ EFF + G V + +++ DR S+RSKGVG
Sbjct: 170 KREGTPPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVG 229
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
YVEF +V A+ L+GQ LLG P++V+ +EAEKN Q ++ A + + P+
Sbjct: 230 YVEFKSEDTVTQALQLTGQKLLGIPIIVQLTEAEKNR-QVRTTEAAGTQSNSIPF----H 284
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLN 413
RLYVGN+HFN+TE L+ VFEPFG +E VQL D+TG +G+GFVQ+ AR AL
Sbjct: 285 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDTGRSRGYGFVQYRDAGQAREALEKM 344
Query: 414 GQLEIVGRAIKVSAVTDQ----------------------SGLQDLGA----NTTGD--- 444
++ GR I+V D+ S G N+T D
Sbjct: 345 NGFDLAGRPIRVGLGNDKFTPESTANLLQRFSGREQPFQGSAFSGAGGRGPQNSTFDRAG 404
Query: 445 ------------FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
DD + G++ N SR LM+KL R+ A+ T + PL
Sbjct: 405 GRDSEKSGGASALDDTDVAGVNFNNYSRDALMRKLARTDDASNAVDERQTLKPKTETKPL 464
Query: 493 PTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNM 552
P + + S C++L NM
Sbjct: 465 PV--------------------------------------------NVNMASRCVVLHNM 480
Query: 553 FDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRAL 611
FDP+ E E++ ++++DV E SK+G++ HI V+ +S G +YL+F+ Q A + L
Sbjct: 481 FDPEEEEGEDWAKELEDDVRQEAESKYGRVVHISVDPNSKGDIYLKFDKVQGGENAIKGL 540
Query: 612 HGRWFAGKMITATFMVPQTYEAKF 635
+GR+F G+MI A+ +V Y + F
Sbjct: 541 NGRYFGGRMIDASPVVDAVYSSLF 564
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 218/411 (53%), Gaps = 31/411 (7%)
Query: 240 PEVDP-ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
PE++ ERD+RT+F Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 166 PELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFK 225
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
SV AI L+GQ LLG P++ + +EAEKN Q+ + A + P+ RLYVG
Sbjct: 226 SEESVAPAIQLTGQKLLGIPIIAQLTEAEKNR-QARNPEASSGHNHAAPF----HRLYVG 280
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
N+HF++TE+ L+ VFEPFG +E VQL DETG +G+GFVQF AR AL ++
Sbjct: 281 NIHFSITENDLQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNGFDL 340
Query: 419 VGRAIKVSAVTDQSG-------LQDLGANTTG----DFDDDEGGGLSLNARSRALLMQKL 467
GRAI+V D+ Q GAN F G G+ S
Sbjct: 341 AGRAIRVGLGNDKFTPDSSAQRSQGHGANQQNFQGSSFSGQGGRGIQAGGTS------SF 394
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQ--LGT 525
DR+G + G+ + A++ T + A + + L+ L + P P
Sbjct: 395 DRAGGRDSEKGAGAS-ALDDTDV----AGVNFNNYSRDALMRKLARTDEPAEPAADDKQK 449
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHI 584
L+ T P+ + + S C+LL+NMFDP E E + D+++DV EC K+G + HI
Sbjct: 450 LLRPKTEVKPLPVNVNMASRCVLLRNMFDPSEEEGEAWIKDLEDDVRAECEEKYGHVVHI 509
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++ +S G +YL+F+ Q A + L+GR+F G+ ITA +V Y + F
Sbjct: 510 ALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITAQPVVDAVYSSLF 560
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 217/440 (49%), Gaps = 97/440 (22%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF D SVP
Sbjct: 165 ERDKRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDEASVP 224
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+AI L+GQ LLG P++ + +EAEKN Q+ + A + + P+ RLYVGN+HF++
Sbjct: 225 LAIQLTGQKLLGIPIIAQLTEAEKNR-QARNPEASSGQSASAPF----HRLYVGNIHFSI 279
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TE+ ++ VFEPFG +E VQL DETG +G+GFVQF AR AL ++ GR I+
Sbjct: 280 TENDIQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIR 339
Query: 425 V------------------------------SAVT----------------DQSGLQDLG 438
V SA + D++G +D
Sbjct: 340 VGLGNDKFTPESTANLLQRFQGQGHHQQYQGSAFSGNGGRGAQAGGAPSNFDRAGGRDTD 399
Query: 439 ANTTG--DFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAP 496
T G DD + G++ N SR LM+KL R T P P+A
Sbjct: 400 KGTGGASALDDTDVAGVNFNNYSRDALMRKLAR------------------TDEPEPSA- 440
Query: 497 LLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPK 556
+ PL T P P+ + + S C+LL+NMFDP
Sbjct: 441 --------DEKLQPLRPKTEPK----------------PLPVNVNMASRCVLLRNMFDPT 476
Query: 557 NETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRW 615
E E + ++++DV EC K+G + HI ++ +S G +YL+F+ Q A + L+GR+
Sbjct: 477 EEEGESWIKELEDDVRAECEEKYGHVVHISLDPNSQGDIYLKFDRVQGGENAIKGLNGRF 536
Query: 616 FAGKMITATFMVPQTYEAKF 635
F G+ I+A +V Y + F
Sbjct: 537 FGGRQISAQPVVDAVYSSLF 556
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 217/411 (52%), Gaps = 26/411 (6%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 190 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 249
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
+ SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 250 KNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----HRLYV 305
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L+ VFEPFG ++ VQL +E G KG+GFVQF AR AL +
Sbjct: 306 GNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGFD 365
Query: 418 IVGRAIKVSAVTDQSG---------LQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
+ GR I+V D+ LQ G N + G A + D
Sbjct: 366 LAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGG----RGANAGGSSGGNFD 421
Query: 469 RSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT---HPGQLGT 525
R+G G+ A++ T + A + + L+ L + P P +
Sbjct: 422 RAGGRDNDKGAGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPAAEPAPDEKRK 477
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHI 584
A + T + P+ T+ + S C+LL+NMFDP E E + ++++DV EC K+G + HI
Sbjct: 478 APKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHI 537
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++ ++ G +YL+F+ Q A + L+GR+F G+ I+A +V Y + F
Sbjct: 538 SLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYSSLF 588
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 218/411 (53%), Gaps = 26/411 (6%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 185 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 244
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
+ SVP+AI L+GQ LLG P++ + +EAEKN N ++ + P+ RLYV
Sbjct: 245 KNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSSNNQQSIPF----HRLYV 300
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L+ VFEPFG ++ VQL +E G KG+GFVQF AR AL +
Sbjct: 301 GNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGFD 360
Query: 418 IVGRAIKVSAVTDQSG---------LQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
+ GR I+V D+ LQ G N + G A + D
Sbjct: 361 LAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGG----RGANAGGSSGGNFD 416
Query: 469 RSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT---HPGQLGT 525
R+G G+ A++ T + A + + L+ L + P P +
Sbjct: 417 RAGGRDNDKGAGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPAAEPAPDEKRK 472
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHI 584
A + T + P+ T+ + S C+LL+NMFDP E E + ++++DV EC K+G + HI
Sbjct: 473 APKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHI 532
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++ ++ G +YL+F+ Q A + L+GR+F G+ I+A +V Y + F
Sbjct: 533 SLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYSSLF 583
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 217/411 (52%), Gaps = 26/411 (6%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 156 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 215
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
+ SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 216 KNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----HRLYV 271
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L+ VFEPFG ++ VQL +E G KG+GFVQF AR AL +
Sbjct: 272 GNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGFD 331
Query: 418 IVGRAIKVSAVTDQSG---------LQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
+ GR I+V D+ LQ G N + G A + D
Sbjct: 332 LAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSPYSHHGG----RGANAGGSSGGNFD 387
Query: 469 RSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT---HPGQLGT 525
R+G G+ A++ T + A + + L+ L + P P +
Sbjct: 388 RAGGRDNDKGAGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPAAEPAPDEKRK 443
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHI 584
A + T + P+ T+ + S C+LL+NMFDP E E + ++++DV EC K+G + HI
Sbjct: 444 APKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHI 503
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++ ++ G +YL+F+ Q A + L+GR+F G+ I+A +V Y + F
Sbjct: 504 SLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYSSLF 554
>gi|294462032|gb|ADE76571.1| unknown [Picea sitchensis]
Length = 203
Score = 218 bits (555), Expect = 8e-54, Method: Composition-based stats.
Identities = 116/186 (62%), Positives = 140/186 (75%), Gaps = 2/186 (1%)
Query: 453 LSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLV 512
+SLNARSRA+LMQKLDRSG AT+ + + V A S +LP PT P G +S V+ LVP L
Sbjct: 19 ISLNARSRAILMQKLDRSGIATSGSVAPVPLANPSLSLPGPTVP--GMSSLVAPLVPSLG 76
Query: 513 QGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVE 572
T+ + G G+A+ P + P+ D IGVP++CLLLKNMFDP NET +FD+DIKEDV+
Sbjct: 77 PTTMSGYMGLHGSAVAAPAVAAPVMDPIGVPNDCLLLKNMFDPNNETEPDFDLDIKEDVQ 136
Query: 573 GECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYE 632
ECSKFG ++HIFV+K SAG VYLRF++ SA AQRALHGRWFAGKMITATFM TYE
Sbjct: 137 DECSKFGAVRHIFVDKHSAGHVYLRFDSATSAIGAQRALHGRWFAGKMITATFMPSYTYE 196
Query: 633 AKFPDS 638
AKFPDS
Sbjct: 197 AKFPDS 202
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 217/411 (52%), Gaps = 26/411 (6%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 188 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 247
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
+ SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 248 KNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----HRLYV 303
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L+ VFEPFG ++ VQL +E G KG+GFVQF AR AL +
Sbjct: 304 GNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGFD 363
Query: 418 IVGRAIKVSAVTDQSG---------LQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
+ GR I+V D+ LQ G N + G A + D
Sbjct: 364 LAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSPYSHHGG----RGANAGGSSGGNFD 419
Query: 469 RSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT---HPGQLGT 525
R+G G+ A++ T + A + + L+ L + P P +
Sbjct: 420 RAGGRDNDKGAGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPAAEPAPDEKRK 475
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHI 584
A + T + P+ T+ + S C+LL+NMFDP E E + ++++DV EC K+G + HI
Sbjct: 476 APKARTEAKPLPVTVNMASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHI 535
Query: 585 FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++ ++ G +YL+F+ Q A + L+GR+F G+ I+A +V Y + F
Sbjct: 536 SLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYSSLF 586
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 205/393 (52%), Gaps = 66/393 (16%)
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYV 295
EP D + + R+VF Q+ + RD+ FF G V D R++ DR SRRSKG+GYV
Sbjct: 4 EPSPD-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVTDRISRRSKGIGYV 62
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF V V AI LSG ++G P+ ++ +EAE+N + G + P+ G +L
Sbjct: 63 EFRTVELVDRAIGLSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPH--GGMQL 120
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNG 414
YVG+LHFN+TE ++QVFEPFG +E V L D TG KG+ FVQ+ R EDA+ AL
Sbjct: 121 YVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDAKMALEQME 180
Query: 415 QLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSAT 474
E+ GR ++V+ V ++ + +T DE GG +LNA SR LMQKL R+ SA
Sbjct: 181 GFELAGRTLRVNTVHEKGSTRYTQQDTL-----DEAGGGNLNAASRQALMQKLARTDSA- 234
Query: 475 TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASV 534
P+ P+ +P +Q
Sbjct: 235 ----------------PVKLEPV------ARPHIPQTMQ--------------------- 251
Query: 535 PIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGF 593
S +LLKNMF+P+ ET ++D D+ +DV+ EC +K+G ++ I VEK++ G
Sbjct: 252 ---------SRSVLLKNMFNPEEETERDWDKDLADDVKSECATKYGPVQAIKVEKETQGE 302
Query: 594 VYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
+Y+ FE +A A L+GRWF G+ I+A F+
Sbjct: 303 IYVLFETVDAAGQAIEGLNGRWFGGRQISAAFI 335
>gi|345563952|gb|EGX46935.1| hypothetical protein AOL_s00097g361 [Arthrobotrys oligospora ATCC
24927]
Length = 546
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 219/408 (53%), Gaps = 44/408 (10%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF + SVP
Sbjct: 160 ERDRRTVFVQQLAARLRTKELIAFFEKVGGVKEAQIVKDRVSGRSKGVGYVEFKEAESVP 219
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG---------TGPYSGGARRL 355
AIAL+GQ LLG P++V+ +EAEKN A A GG T P+ RL
Sbjct: 220 KAIALTGQRLLGIPIIVQLTEAEKN------RQARAEGGQHNRDEDHRRTIPF----HRL 269
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQ 415
YVGN+HF++TE++L+QVF PFG +E VQL +E+G +G+GFVQ+ +A+ AL
Sbjct: 270 YVGNIHFSITENELQQVFAPFGDLEFVQLQKEESGRSRGYGFVQYRDPNNAKEALERMNG 329
Query: 416 LEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATT 475
++ GR I+V D+ + A F + G + R R +Q ++ SG+A+
Sbjct: 330 FDLGGRLIRVGLGNDKFTPEST-AQMLQRFSN---GQQAYEGRQRHNQIQNINTSGAASA 385
Query: 476 IAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHP------GQLGTALQV 529
+ + V VN + L+ L + P H G+ Q+
Sbjct: 386 LDDADVA-GVNFNNF------------SRDALMRKLARVEEPVHEQNGETNGEQKQRRQI 432
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVE 587
P P+ V S C+++KNMFDP E + + D+++DV+ EC +K+G + HI V+
Sbjct: 433 APPPKPPVATNSTVASRCVVVKNMFDPTQEEGDAWVKDLEDDVKAECEAKYGHVVHISVD 492
Query: 588 KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+S G VY++FE A + L+GR+F G+ I+A +V Y + F
Sbjct: 493 PNSGGDVYIKFEKIVGGENAIKGLNGRFFGGRQISALPVVDAVYSSLF 540
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 226/453 (49%), Gaps = 112/453 (24%)
Query: 216 EKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKV 275
+K R SR RP ++E + D ERD+RTVF Q+ + R++ FF + G V
Sbjct: 112 KKHRRSRSPVTRESRPPVREESPKLTED-ERDRRTVFVQQLAARLRTRELIAFFEKVGPV 170
Query: 276 RDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNS 335
RD +++ DR S RSKG + LLG P++V+ +EAEKN Q+ +
Sbjct: 171 RDAQVVKDRVSGRSKGA-------------------KRLLGIPIIVQLTEAEKNR-QAKA 210
Query: 336 SIAGASGG--GTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHC 392
+SGG P+ RLYVGN+HFN+TED LRQ+FEPFG +E VQL + +TG
Sbjct: 211 EAMLSSGGRQSDAPF----HRLYVGNIHFNLTEDDLRQIFEPFGELEFVQLQKEPDTGRS 266
Query: 393 KGFGFVQFARLEDARNALNLNGQLEIVGRAIKV------------SAVT----------- 429
+G+GFVQ+ AR+AL E+ GRAI+V SAV
Sbjct: 267 RGYGFVQYRDPAQARDALEKMNGFELAGRAIRVGLGNDKFTPESTSAVLARFSGFTGSAF 326
Query: 430 ---DQSGLQDLG----ANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVT 482
++ G + +G +++ DD+E GG+S N SR LM+KL R +I
Sbjct: 327 ENKNRGGTERIGGPRDGSSSVSLDDNEAGGVSFNNISRDALMRKLAREEGKESIG----- 381
Query: 483 PAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGV 542
A P PT P VQ T
Sbjct: 382 -----LAPPKPT---------------PAVQMT--------------------------- 394
Query: 543 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENT 601
S C+LLKNMF+P+ E+ + + ++++DV+ EC +K+GK+ HI VE++S G VY++F+N
Sbjct: 395 -SRCVLLKNMFNPQEESGDNWIRELEDDVKAECENKYGKVLHIHVEENSPGDVYIKFDNV 453
Query: 602 QSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
+ A + L+GRWF G+ I+A+F++ Y AK
Sbjct: 454 VAGERAIQGLNGRWFGGRTISASFLIDAVYTAK 486
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/395 (36%), Positives = 211/395 (53%), Gaps = 19/395 (4%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSKGVGYVEF + SV
Sbjct: 190 ERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESVA 249
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
A+ L+GQ LLG PV+V+P+EAEKN NS +G P S RLYVGN+HF++
Sbjct: 250 AALQLTGQKLLGIPVIVQPTEAEKNRQARNSESSGH------PNSIPFHRLYVGNIHFSI 303
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TE L+ VFEPFG +E VQL D++G +G+GFVQF AR AL ++ GR I+
Sbjct: 304 TETDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDASQAREALEKMNGFDLAGRPIR 363
Query: 425 VSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPA 484
V D+ + AN F G A R L DR+G + G+A + A
Sbjct: 364 VGLGNDKFTPEST-ANLLRGFQGQNQGSAFSGAGGRGLQASNFDRAGGRDSDKGTAAS-A 421
Query: 485 VNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPS 544
++ T + A + + L+ L + P+ L+ T + P+ + + S
Sbjct: 422 LDDTDV----AGVNFNNYSRDALMRKLARTDEPSTGQPERQILKPKTETQPLPVNVSMAS 477
Query: 545 ECLLLKNMFDPKNETYEEFDMDIKE----DVEGECSKFGKLKHIFVEKDSAGFVYLRFEN 600
C++L NMFDP T +E + IKE + K+G + HI V+ +S G +YL+F+
Sbjct: 478 RCVVLHNMFDP---TEQEGEGWIKELEEEVRQEAEEKYGHVVHIAVDPNSQGDIYLKFDK 534
Query: 601 TQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
A + L+GR+F G+MI+A +V Y + F
Sbjct: 535 VSGGENAIKGLNGRYFDGRMISAAPVVDAVYSSLF 569
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 219/418 (52%), Gaps = 30/418 (7%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P+ + +P + ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSK
Sbjct: 165 PRARDGTPQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 224
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
GVGYVEF + SV A+ L+GQ LLG PV+V+ +EAEKN + +G P S
Sbjct: 225 GVGYVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHH-----PNSI 279
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
RLYVGN+HF++TE L+ VFEPFG +E VQL D+ G +G+GFVQF AR AL
Sbjct: 280 PFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREAL 339
Query: 411 NLNGQLEIVGRAIKVSAVTDQ-------SGLQDL-GANTTGDFDDDEGGGLSLNARSRAL 462
++ GR I+V D+ + LQ G N F +G S A R
Sbjct: 340 EKMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQF---QGSAFS-GAGGRGP 395
Query: 463 LMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLV----PPLVQGTVPT 518
DR+G+ G+ + A++ T + + + L PP +P
Sbjct: 396 TTSNFDRAGARDNEKGTGAS-ALDDTDVAGVNFNNYSRDALMRKLARTDEPP--ASVIPE 452
Query: 519 HPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SK 577
L+ T + P+ + + S C++L NMFDP E E + ++++DV E +K
Sbjct: 453 R-----QILKPKTETKPLPVNVNMASRCVVLHNMFDPAEEEGENWIKELEDDVREEAEAK 507
Query: 578 FGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+G + HI ++ +SAG +YL+F+ Q A + L+GR+F G+MITA +V Y + F
Sbjct: 508 YGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITAAPVVDAVYSSLF 565
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 205/392 (52%), Gaps = 68/392 (17%)
Query: 247 DQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
+QR+VF Q+ + RD+ FF G VRD R++ DR SRRSKG+GYVE + V
Sbjct: 198 EQRSVFVTQLAARLTARDLGYFFEEKLGDGAVRDARIVTDRLSRRSKGIGYVELRSLDLV 257
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
AIAL+G ++G P+ V+ +EAE+N + S + G S G +LYVG+LHF
Sbjct: 258 SKAIALTGTVVMGLPIKVQLTEAERNRIHSGDLLNLPPG--VTATSHGPMQLYVGSLHFQ 315
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
+TE++++QVFEPFG +E V L D TG KG+ F+Q+ R EDA+ AL E+ GR
Sbjct: 316 LTEEEIKQVFEPFGELEFVDLHRDPATGRSKGYCFIQYRRPEDAKMALEQMDGFELAGRQ 375
Query: 423 IKVSAVTDQS----GLQDLGANTTGDFDD--DEGGGLSLNARSRALLMQKLDRSGSATTI 476
++V+ V ++ G + G+ + DEGGG +LNA SR LMQKL R+
Sbjct: 376 LRVNTVHEKGVAAPGGVGMSLRAMGNTAESLDEGGG-NLNAVSRQALMQKLART------ 428
Query: 477 AGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPI 536
N +PLP S P
Sbjct: 429 ---------NEPQIPLPV--------------------------------------SGPK 441
Query: 537 FDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKF-GKLKHIFVEKDSAGFV 594
+ + C+LLKN FDP ET ++D +++EDV EC SKF G+++ I VEKDS G +
Sbjct: 442 INIKSQETRCILLKNAFDPAEETDPDWDKNLQEDVVAECESKFQGRVEKIVVEKDSKGEI 501
Query: 595 YLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
Y++ ++ A A L GRWF G+ I+A+++
Sbjct: 502 YIQCDSIDMAKRAVANLDGRWFGGRQISASYI 533
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 219/418 (52%), Gaps = 30/418 (7%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P+ + +P + ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSK
Sbjct: 165 PRARDGTPQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 224
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
GVGYVEF + SV A+ L+GQ LLG PV+V+ +EAEKN + +G P S
Sbjct: 225 GVGYVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHH-----PNSI 279
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
RLYVGN+HF++TE L+ VFEPFG +E VQL D+ G +G+GFVQF AR AL
Sbjct: 280 PFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREAL 339
Query: 411 NLNGQLEIVGRAIKVSAVTDQ-------SGLQDL-GANTTGDFDDDEGGGLSLNARSRAL 462
++ GR I+V D+ + LQ G N F +G S A R
Sbjct: 340 EKMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQF---QGSAFS-GAGGRGP 395
Query: 463 LMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLV----PPLVQGTVPT 518
DR+G+ G+ + A++ T + + + L PP +P
Sbjct: 396 ATSNFDRAGARDNEKGTGAS-ALDDTDVAGVNFNNYSRDALMRKLARTDEPP--ASVIPE 452
Query: 519 HPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SK 577
L+ T + P+ + + S C++L NMFDP E E + ++++DV E +K
Sbjct: 453 R-----QILKPKTETKPLPVNVNMASRCVVLHNMFDPAEEEGENWIKELEDDVREEAEAK 507
Query: 578 FGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+G + HI ++ +SAG +YL+F+ Q A + L+GR+F G+MITA +V Y + F
Sbjct: 508 YGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITAAPVVDAVYSSLF 565
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 225/424 (53%), Gaps = 23/424 (5%)
Query: 219 RESRDNDKESRRPK--EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
R ++D+D RP+ K+E + ERD+RTVF Q+ + RD+ FF + G V
Sbjct: 152 RRAKDDD----RPETSSKREATPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVT 207
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSS 336
+ +++ DR S+RSKGVGYVEF + SV A+ L+GQ LLG P++V+ +EAEKN +
Sbjct: 208 EAQIVKDRISQRSKGVGYVEFKNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTE 267
Query: 337 IAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFG 396
A P S RLYVGN+HFN+TE L+ VFEPFG +E VQL D+ G +G+G
Sbjct: 268 TTSAH-----PNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYG 322
Query: 397 FVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDD----EGGG 452
FVQ+ AR AL ++ GR I+V D+ + AN F +G
Sbjct: 323 FVQYREASQAREALEKMNGFDLAGRPIRVGLGNDKFTPEST-ANILQRFPGQNPQFQGSA 381
Query: 453 LSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLV 512
S A R DR+G + S A++ T + A + + L+ L
Sbjct: 382 FS-GAGGRGPQTSAFDRAGGRDS-EKSGGASALDDTDV----AGVNFNNYSRDALMRKLA 435
Query: 513 QGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVE 572
+ ++ L+ T + P+ + + S C++L NMFDP+ E +E+ ++++DV
Sbjct: 436 RTDDASNGVDERQVLKPKTETKPLPVNVNMASRCVVLHNMFDPEEEEGDEWVKELEDDVR 495
Query: 573 GEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTY 631
E +K+G++ HI V+ +S G +YL+F+ Q A R L+GR+F G+MI A+ +V Y
Sbjct: 496 QEAETKYGRVVHISVDPNSKGDIYLKFDKVQGGENAIRGLNGRYFGGRMIDASPVVDAVY 555
Query: 632 EAKF 635
+ F
Sbjct: 556 SSLF 559
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 217/446 (48%), Gaps = 94/446 (21%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 177 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 236
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
D SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 237 KDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANASGNQNSIPF----HRLYV 292
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L++VFEPFG ++ VQL +E G +G+GFVQF AR AL +
Sbjct: 293 GNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFD 352
Query: 418 IVGRAIKVSAVTDQ---------------------------SGLQDLGANTTGD------ 444
+ GR I+V D+ SG GA G
Sbjct: 353 LAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGHFDRA 412
Query: 445 --------------FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTAL 490
DD + G++ N SR LM+KL R+ PAV T
Sbjct: 413 GGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTDE----------PAVEPT-- 460
Query: 491 PLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLK 550
P + VP Q+ +P+ ++ + S C+LL+
Sbjct: 461 -------------------PDEKRKVPKP--------QINAKPLPV--SVNMASRCVLLR 491
Query: 551 NMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQR 609
NMFDP E E + ++++DV EC K+G + HI ++ ++ G +YL+F+ Q A +
Sbjct: 492 NMFDPAEEEGESWVKELEDDVRAECEDKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIK 551
Query: 610 ALHGRWFAGKMITATFMVPQTYEAKF 635
L+GR+F G+ I+A +V Y + F
Sbjct: 552 GLNGRFFGGRQISAQPVVDAVYSSLF 577
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 211/438 (48%), Gaps = 100/438 (22%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + R++ EFF + G V + +++ DR S+RSKGVGYVEF + SV
Sbjct: 174 ERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNEESVT 233
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
A+ L+GQ LLG PV+V+ +EAEKN N +G P S RLYVGN+HFN+
Sbjct: 234 QALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPH-----PNSIPFHRLYVGNIHFNV 288
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TE L+ VFEPFG +E VQL DE G +G+GFVQF AR AL ++ GR I+
Sbjct: 289 TEQDLQAVFEPFGELEFVQLQKDENGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 348
Query: 425 V----------------------------------------SAVTDQSGLQDLGANTTGD 444
V S+ D++G +D + TG
Sbjct: 349 VGLGNDKFTPESTANMLQRFSGQNQSFQGSAFSGAGGRGPQSSTFDRAGGRD--SEKTGG 406
Query: 445 ---FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG---SAVTPAVNSTALPLPTAPLL 498
DD + G++ N SR LM+KL R+ T + P + + LP+
Sbjct: 407 SSALDDTDVAGVNFNNYSRDALMRKLARTDDTNTNGNDERQVLKPKMETKPLPM------ 460
Query: 499 GAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNE 558
+ + S C++L NMFDP+ E
Sbjct: 461 ----------------------------------------NVNMASRCVVLHNMFDPEEE 480
Query: 559 TYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFA 617
+++ ++++DV E S++G + HI V+ +S G +YL+F+ Q A + L+GR+F
Sbjct: 481 EGDDWVKELEDDVRQEAESRYGHVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFG 540
Query: 618 GKMITATFMVPQTYEAKF 635
G+MI A+ +V Y + F
Sbjct: 541 GRMIDASPVVDAVYSSLF 558
>gi|325187692|emb|CCA22234.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 423
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 212/432 (49%), Gaps = 67/432 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
RD RTVF Q+ K ERD+ ++F++ GK V LI D+ + RSKG YVE ++ VP
Sbjct: 5 RDHRTVFIGQLTQKVRERDLEKYFNKVGKTEHVLLIRDKFTNRSKGFAYVEMSNLEDVPK 64
Query: 306 AIALSGQPLLGQ--PVMVKPSEAEKNLVQSNSSIAGA---------SGGGTGP------- 347
+ L+GQ Q PVM+K SEAEKN ++ + S GP
Sbjct: 65 VLLLNGQIPEFQIFPVMIKASEAEKNFAAKKDTVMSSTMRSSDWLNSSESNGPNSALAAA 124
Query: 348 ---------YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFV 398
A R+Y GNLH N+TED LR VF FG V V + DE G KG+GF+
Sbjct: 125 IASSMSSGGSLSAASRIYCGNLHTNVTEDHLRVVFHSFGEVVSVNINRDEMGRSKGYGFI 184
Query: 399 QFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGL--QDLGANTTGD------FDDDEG 450
QF ++A AL+ LE+ G +++ V + +GL +G+ +T D DDDEG
Sbjct: 185 QFGTPQEANLALSKGNGLELHGNFLRLGPVNENAGLGGMGMGSFSTMDGSHMWKLDDDEG 244
Query: 451 GGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPP 510
G++LN++SR LM KL A P P + S++ T V
Sbjct: 245 AGMALNSQSRTALMAKL----------------AGGKDIFPNPAS-----GSSMYTNVGS 283
Query: 511 LVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYE---EFDMDI 567
G + AL AS I GVPS C ++KNMFD + E ++ ++I
Sbjct: 284 NSYGKSEISQTERAAAL----ASEKI---EGVPSFCFVVKNMFDAQAEKRTGNPDWHLEI 336
Query: 568 KEDVEGECSKFGKLKHIFVEKDSAG-FVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
+EDV EC FG + H FVEK+ G VY+ F+ +SA A +HGRWF + I+ F+
Sbjct: 337 QEDVVEECESFGPVLHSFVEKEKVGGLVYILFDQKESAMKAANRMHGRWFNKRQISVRFL 396
Query: 627 VPQTYEAKFPDS 638
Q Y FP++
Sbjct: 397 SSQEYVGMFPEA 408
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 217/414 (52%), Gaps = 30/414 (7%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P+ + +P + ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSK
Sbjct: 165 PRARDGTPQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 224
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
GVGYVEF + SV A+ L+GQ LLG PV+V+ +EAEKN + +G P S
Sbjct: 225 GVGYVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHH-----PNSI 279
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
RLYVGN+HF++TE L+ VFEPFG +E VQL D+ G +G+GFVQF AR AL
Sbjct: 280 PFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREAL 339
Query: 411 NLNGQLEIVGRAIKVSAVTDQ-------SGLQDL-GANTTGDFDDDEGGGLSLNARSRAL 462
++ GR I+V D+ + LQ G N F +G S A R
Sbjct: 340 EKMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQF---QGSAFS-GAGGRGP 395
Query: 463 LMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLV----PPLVQGTVPT 518
DR+G+ G+ + A++ T + + + L PP +P
Sbjct: 396 ATSNFDRAGARDNEKGTGAS-ALDDTDVAGVNFNNYSRDALMRKLARTDEPP--ASVIPE 452
Query: 519 HPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SK 577
L+ T + P+ + + S C++L NMFDP E E + ++++DV E +K
Sbjct: 453 R-----QILKPKTETKPLPVNVNMASRCVVLHNMFDPAEEEGENWIKELEDDVREEAEAK 507
Query: 578 FGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTY 631
+G + HI ++ +SAG +YL+F+ Q A + L+GR+F G+MITA +V Y
Sbjct: 508 YGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITAAPVVDAVY 561
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 217/454 (47%), Gaps = 99/454 (21%)
Query: 230 RPKEKKEQVEPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRR 288
R + K+E+ P++ + ERD+RTVF Q+ + R++ EFF + G V + +++ DR S+R
Sbjct: 158 RRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQR 217
Query: 289 SKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPY 348
SKGVGYVEF + SV A+ L+GQ LLG PV+V+ +EAEKN N +G P
Sbjct: 218 SKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPH-----PN 272
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARN 408
S RLYVGN+HFN+TE L+ VFEPFG +E VQL DE G +G+GFVQF AR
Sbjct: 273 SIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDENGRSRGYGFVQFRDAGQARE 332
Query: 409 ALNLNGQLEIVGRAIKVSAVTDQ-------SGLQDL-GANTTGDF--------------- 445
AL ++ GR I+V D+ + LQ G N +F
Sbjct: 333 ALEKMNGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNQNQNFQGSAFSGSGGRGPQS 392
Query: 446 --------------------DDDEGGGLSLNARSRALLMQKLDRSGSATTIAG---SAVT 482
DD + G++ N SR LM+KL R+ + T +
Sbjct: 393 STFDRAGGRDNEKTGGASALDDTDVAGVNFNNYSRDALMRKLARTDDSATNGHDERQVLK 452
Query: 483 PAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGV 542
P + LP+ + +
Sbjct: 453 PKTETKPLPV----------------------------------------------NVNM 466
Query: 543 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENT 601
S C++L NMFDP+ E ++ ++++DV E SK+G + HI + +S G +YL+F+
Sbjct: 467 ASRCVVLHNMFDPEEEEGTDWVKELEDDVRQEAESKYGHVVHISADPNSKGDIYLKFDKV 526
Query: 602 QSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
Q A + L+GR+F G+MI A+ +V Y + F
Sbjct: 527 QGGENAIKGLNGRYFGGRMIDASPVVDAVYSSLF 560
>gi|328848768|gb|EGF97966.1| hypothetical protein MELLADRAFT_84111 [Melampsora larici-populina
98AG31]
Length = 695
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 217/436 (49%), Gaps = 107/436 (24%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
E + R+VF Q+ + +R++ +FF +AGKVRD R+I DR SRRSKGVGYVEF ++ SV
Sbjct: 302 EHEMRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKGVGYVEFRELDSV 361
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNL-----VQSNSSIAG----------------ASG 342
A+AL+G LLG PVMV+ +EAEKN Q N+ AG
Sbjct: 362 QKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNNVAAGLVTVPPAPPVQRSYVAPKP 421
Query: 343 GGTGPYSGGA-RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGF--- 397
G GP + RLYVG+L+FN+T+D LRQVF+PFG +E V L D+ TG KG+ F
Sbjct: 422 RGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFTLL 481
Query: 398 ----VQFARLEDARNALNLNGQLEIVGRAIKV---------------SAVTDQSGLQDLG 438
++F + DA+NA+ ++ GRA++V V + + G
Sbjct: 482 TCVNIRFKNMHDAKNAMEKMNGFQLAGRALRVEIKAQPPAALLNATAPGVINPVIVTPTG 541
Query: 439 AN----TTGDFDD--DEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
N + F++ +E G +N SR LM KL R+ T +
Sbjct: 542 GNFAMTNSNSFEERLEEPVGSGMNQISRVELMHKLARTEQPTNV---------------- 585
Query: 493 PTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNM 552
V+ + P +PTA+ S +LLKNM
Sbjct: 586 ----------PVTDMFRP-----------------NIPTAT----------SRSVLLKNM 608
Query: 553 FDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRA 610
F+P+ ET +DM++++DV+GEC K+G + I +EK+S G +Y+ F++ SA A
Sbjct: 609 FNPEEETERGWDMELRDDVKGECEEKYGPVLAIAIEKESMGGEIYITFDSVASAQKAIAG 668
Query: 611 LHGRWFAGKMITATFM 626
L+ RWF G+ ITA F+
Sbjct: 669 LNNRWFGGRQITAAFI 684
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 211/396 (53%), Gaps = 67/396 (16%)
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYVE 296
PE + + R+VF Q+ + RD+ FF G VRDVR++ DR SRRSKG+ YVE
Sbjct: 294 PEHSEDSELRSVFVSQLAARLTARDLGYFFEEKLGEGSVRDVRIVTDRVSRRSKGIAYVE 353
Query: 297 FYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLY 356
+ V AIAL+G ++G P+MV+ +E+E+N V ++ S G T P G+ +LY
Sbjct: 354 LSSIDMVSRAIALTGTIVMGLPIMVQLTESERNKVAASGSSMHLPPGVTAP-PPGSMQLY 412
Query: 357 VGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQ 415
VG+LHFN+TE ++QVFEPFG +E V L D TG KGF FVQ+ R EDAR AL
Sbjct: 413 VGSLHFNLTESDVKQVFEPFGELEFVDLHRDPLTGRSKGFAFVQYKRSEDARMALQSMDG 472
Query: 416 LEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATT 475
++ GR +KV+ V ++ G + + D D+ GGG +LNA SR LMQKL R
Sbjct: 473 FDLAGRQLKVNTVHEKGGA--IRYQSQSDSLDESGGG-NLNAASRQALMQKLAR------ 523
Query: 476 IAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVP 535
+ P P P A+S P AS+P
Sbjct: 524 -----IEP-------PKP---------AIS------------------------PMASLP 538
Query: 536 IFDTIGVPSECLLLKNMF-DPKNETYE---EFDMDIKEDVEGECS-KFGKLKHIFVEKDS 590
+ S +LL+NMF +P+ E E + ++ +DV+ EC K+G + I +E DS
Sbjct: 539 ---KAAMQSRSVLLRNMFKEPELEEKENGPNWAKELTDDVKQECEDKYGLVDFIKLEPDS 595
Query: 591 AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
G +YL+F++ ++A A L+GR+F G+ I ATF+
Sbjct: 596 QGEMYLKFKSIEAASKAIEGLNGRYFGGQPIQATFI 631
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/434 (33%), Positives = 207/434 (47%), Gaps = 92/434 (21%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSKGVGYVEF D SV
Sbjct: 166 ERDRRTVFVQQLAARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGVGYVEFKDEDSVA 225
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
A+ L+GQ LLG PV+V+ +EAEKN N+ GG P RLYVGN+HFN+
Sbjct: 226 TALQLTGQKLLGIPVIVQVTEAEKNRQARNT-----EAGGPHPNHVPFHRLYVGNIHFNV 280
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TE+ LR VFEPFG +E VQL DE+ +G+GFVQF AR AL ++ GR I+
Sbjct: 281 TEEDLRAVFEPFGELEFVQLQKDESDRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIR 340
Query: 425 VSAVTDQ-------SGLQDLGANTTGD--------------------------------- 444
V D+ + LQ + +
Sbjct: 341 VGLGNDKFTPESTANMLQRFSGQNSSNQQGSSFSGSGGRGGQNSNFDRAGARDSEKTGGA 400
Query: 445 --FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAAS 502
DD + GG++ N SR LM+KL R+ + GS P
Sbjct: 401 SALDDTDVGGVNFNNYSRDALMRKLARTDESNK--GSEERP------------------- 439
Query: 503 AVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEE 562
L+ T P+ + S C++L NMF+P E ++
Sbjct: 440 -----------------------VLKPRTEKKPLPVNVNTASRCVVLHNMFNPDEEEGDD 476
Query: 563 FDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMI 621
+ ++++DV E K+G++ HI V+ +S G +YL+FE Q A R L+GR+F G+MI
Sbjct: 477 WVKELEDDVRQEAEDKYGRVVHISVDPNSKGDIYLKFEKVQGGENAIRGLNGRYFGGRMI 536
Query: 622 TATFMVPQTYEAKF 635
A+ +V Y + F
Sbjct: 537 DASPVVDAVYSSLF 550
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 217/446 (48%), Gaps = 94/446 (21%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 179 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 238
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
+ SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 239 KNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPF----HRLYV 294
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L++VFEPFG ++ VQL +E G +G+GFVQF AR AL +
Sbjct: 295 GNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFD 354
Query: 418 IVGRAIKVSAVTDQ---------------------------SGLQDLGANTTGD------ 444
+ GR I+V D+ SG GA G
Sbjct: 355 LAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGHFDRA 414
Query: 445 --------------FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTAL 490
DD + G++ N SR LM+KL R+ PAV T
Sbjct: 415 GGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTDE----------PAVEPT-- 462
Query: 491 PLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLK 550
P + VP QV +P+ ++ + S C+LL+
Sbjct: 463 -------------------PDEKRKVPKP--------QVNAKPLPV--SVNMASRCVLLR 493
Query: 551 NMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQR 609
NMFDP E E + ++++DV EC K+G + HI ++ ++ G +YL+F+ Q A +
Sbjct: 494 NMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIK 553
Query: 610 ALHGRWFAGKMITATFMVPQTYEAKF 635
L+GR+F G+ I+A +V Y + F
Sbjct: 554 GLNGRFFGGRQISAQPVVDAVYSSLF 579
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 217/446 (48%), Gaps = 94/446 (21%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 178 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 237
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
+ SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 238 KNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPF----HRLYV 293
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L++VFEPFG ++ VQL +E G +G+GFVQF AR AL +
Sbjct: 294 GNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFD 353
Query: 418 IVGRAIKVSAVTDQ---------------------------SGLQDLGANTTGD------ 444
+ GR I+V D+ SG GA G
Sbjct: 354 LAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGHFDRA 413
Query: 445 --------------FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTAL 490
DD + G++ N SR LM+KL R+ PAV T
Sbjct: 414 GGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTDE----------PAVEPT-- 461
Query: 491 PLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLK 550
P + VP QV +P+ ++ + S C+LL+
Sbjct: 462 -------------------PDEKRKVPKP--------QVNAKPLPV--SVNMASRCVLLR 492
Query: 551 NMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQR 609
NMFDP E E + ++++DV EC K+G + HI ++ ++ G +YL+F+ Q A +
Sbjct: 493 NMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIK 552
Query: 610 ALHGRWFAGKMITATFMVPQTYEAKF 635
L+GR+F G+ I+A +V Y + F
Sbjct: 553 GLNGRFFGGRQISAQPVVDAVYSSLF 578
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 217/446 (48%), Gaps = 94/446 (21%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 179 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 238
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
+ SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 239 KNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPF----HRLYV 294
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L++VFEPFG ++ VQL +E G +G+GFVQF AR AL +
Sbjct: 295 GNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFD 354
Query: 418 IVGRAIKVSAVTDQ---------------------------SGLQDLGANTTGD------ 444
+ GR I+V D+ SG GA G
Sbjct: 355 LAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGHFDRA 414
Query: 445 --------------FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTAL 490
DD + G++ N SR LM+KL R+ PAV T
Sbjct: 415 GGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTDE----------PAVEPT-- 462
Query: 491 PLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLK 550
P + VP QV +P+ ++ + S C+LL+
Sbjct: 463 -------------------PDEKRKVPKP--------QVNAKPLPV--SVNMASRCVLLR 493
Query: 551 NMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQR 609
NMFDP E E + ++++DV EC K+G + HI ++ ++ G +YL+F+ Q A +
Sbjct: 494 NMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIK 553
Query: 610 ALHGRWFAGKMITATFMVPQTYEAKF 635
L+GR+F G+ I+A +V Y + F
Sbjct: 554 GLNGRFFGGRQISAQPVVDAVYSSLF 579
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/461 (32%), Positives = 222/461 (48%), Gaps = 97/461 (21%)
Query: 219 RESRDNDKESRRPK--EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
R ++D+D RP+ K+E + ERD+RTVF Q+ + RD+ FF + G V
Sbjct: 152 RRAKDDD----RPEASSKREATPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVT 207
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSS 336
+ +++ DR S+RSKGVGYVEF + SV A+ L+GQ LLG P++V+ +EAEKN +
Sbjct: 208 EAQIVKDRISQRSKGVGYVEFKNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTE 267
Query: 337 IAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFG 396
A P S RLYVGN+HFN+TE L+ VFEPFG +E VQL D+ G +G+G
Sbjct: 268 TTAAH-----PNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYG 322
Query: 397 FVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ------------------------- 431
FVQ+ AR AL ++ GR I+V D+
Sbjct: 323 FVQYREASQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANILQRFPGQNPQYQGSAF 382
Query: 432 SGLQDLGANTTG----------------DFDDDEGGGLSLNARSRALLMQKLDRSGSATT 475
SG G T+ DD + G++ N SR LM+KL R+ A+
Sbjct: 383 SGAGGRGPQTSAFDRAGGRDSEKSGGASALDDTDVAGVNFNNYSRDALMRKLARTDDASN 442
Query: 476 IAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVP 535
V+ L L+ T + P
Sbjct: 443 --------GVDERQL------------------------------------LKPKTETKP 458
Query: 536 IFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFV 594
+ + + S C++L NMFDP+ E +++ ++++DV E +K+G++ HI V+ +S G +
Sbjct: 459 LPVNVNMASRCVVLHNMFDPEEEEGDDWVKELEDDVRQEAETKYGRVVHISVDPNSKGDI 518
Query: 595 YLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
YL+F+ Q A R L+GR+F G+MI A+ +V Y + F
Sbjct: 519 YLKFDKVQGGENAIRGLNGRYFGGRMIDASPVVDAVYSSLF 559
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 217/414 (52%), Gaps = 30/414 (7%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P+ + +P + ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSK
Sbjct: 164 PRARDGTPQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 223
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
GVGYVEF + SV A+ L+GQ LLG PV+V+ +EAEKN + +G P S
Sbjct: 224 GVGYVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHH-----PNSI 278
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
RLYVGN+HF++TE L+ VFEPFG +E VQL D+ G +G+GFVQF AR AL
Sbjct: 279 PFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREAL 338
Query: 411 NLNGQLEIVGRAIKVSAVTDQ-------SGLQDL-GANTTGDFDDDEGGGLSLNARSRAL 462
++ GR I+V D+ + LQ G N F +G S A R
Sbjct: 339 EKMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQF---QGSAFS-GAGGRGP 394
Query: 463 LMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLV----PPLVQGTVPT 518
DR+G+ G+ + A++ T + + + L PP +P
Sbjct: 395 ATSNFDRAGARDNEKGTGAS-ALDDTDVGGVNFNNYSRDALMRKLARTDEPP--ASVIPE 451
Query: 519 HPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SK 577
L+ T + P+ + + S C++L NMFDP E E + ++++DV E +K
Sbjct: 452 R-----QILKPKTETKPLPVNVNMASRCVVLHNMFDPAEEEGENWIKELEDDVREEAEAK 506
Query: 578 FGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTY 631
+G + HI ++ +SAG +YL+F+ Q A + L+GR+F G+MITA +V Y
Sbjct: 507 YGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITAAPVVDAVY 560
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 208/432 (48%), Gaps = 88/432 (20%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSKGVGYVEF SVP
Sbjct: 179 ERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGVGYVEFKSEDSVP 238
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+A+ L+GQ LLG PV+V+ +EAEKN N + A P S RLYVGN+HFN+
Sbjct: 239 LALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSSNAH-----PNSVPFHRLYVGNIHFNV 293
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TE L+ VFEPFG +E VQL D+ G +G+GFVQF AR AL ++ GR I+
Sbjct: 294 TEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 353
Query: 425 VSAVTDQ-------------------------SGLQDLGANTTGD--------------- 444
V D+ SG G +T D
Sbjct: 354 VGLGNDKFTPESTANLMHKFSGNNQGFQGSAFSGAGGRGQQSTFDRAGGRDSEKTGGASA 413
Query: 445 FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAV 504
DD + G++ N SR LM+KL R+ AP G
Sbjct: 414 LDDTDVAGVNFNNYSRDALMRKLARTDE----------------------APTNGNDERQ 451
Query: 505 STLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFD 564
L P + T +P+ + + S C++L NMFDP E +++
Sbjct: 452 QILKP------------------KTETKPLPV--NVNMASRCVVLHNMFDPAEEEGDDWV 491
Query: 565 MDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITA 623
+++++V E K+G + HI V+ +S G +YL+F+ Q A + L+GR+F G+MI A
Sbjct: 492 KELEDEVRQEAEEKYGHVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 551
Query: 624 TFMVPQTYEAKF 635
+ +V Y + F
Sbjct: 552 SPVVDAVYSSLF 563
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/401 (36%), Positives = 212/401 (52%), Gaps = 67/401 (16%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSR 287
P E EP+ D + + R+VF Q+ + RD+ FF G V D R++ DR SR
Sbjct: 86 PPEDYNPEEPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSR 144
Query: 288 RSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGP 347
RSKG+GYVE + V AI LSG ++G P+ V+ +EAE+N + G +G
Sbjct: 145 RSKGIGYVELKTIELVDQAINLSGTVVMGLPIKVQHTEAERNRTHAGDGSLNLPPGVSGT 204
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDA 406
+ G R+LYVG+LHFN+TE ++QVFEPFG +E V L D TG KG+ F+Q+ R EDA
Sbjct: 205 H--GPRQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYCFIQYKRAEDA 262
Query: 407 RNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQK 466
+ AL E+ GR ++V+ V ++ ++ T +E GG +LNA SR LMQK
Sbjct: 263 KMALEQMEGFELAGRTLRVNTVHEKGTVK-----YTQQESLEENGG-NLNAASRQALMQK 316
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L R + PA AP V T+ P++ T
Sbjct: 317 LAR-----------IEPA---------RAP-------VETVSKPVITQT----------- 338
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIF 585
+ S+ +LLKNMFDP ET +++D D+ +DV+ EC +K+G + I
Sbjct: 339 ---------------LQSKSVLLKNMFDPAEETEKDWDKDLADDVKVECENKYGMVNFIK 383
Query: 586 VEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
V+K+S G +Y++F+ SA A L+GR+F G+ +TATF+
Sbjct: 384 VDKESQGEIYVKFDTVDSAKKAIEGLNGRYFGGRQVTATFI 424
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 218/414 (52%), Gaps = 30/414 (7%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 194 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 253
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
D SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 254 KDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPF----HRLYV 309
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L++VFEPFG ++ VQL +E G +G+GFVQF AR AL +
Sbjct: 310 GNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFD 369
Query: 418 IVGRAIKVSAVTDQSG----------LQDLGA--NTTGDFDDDEGGGLSLNARSRALLMQ 465
+ GR I+V D+ Q GA N G GG ++A
Sbjct: 370 LAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGG-----RGAQAGGSG 424
Query: 466 KLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGT 525
DR+G + A++ T + A + + L+ L + P +
Sbjct: 425 NFDRAGGRDNDKAAGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPAVEPKPDE 480
Query: 526 ALQVPTASV---PIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKL 581
+VP + P+ T+ + S C+LL+NMFDP E + + ++++DV EC K+G +
Sbjct: 481 KRKVPKPQLNAKPLPVTVNMASRCVLLRNMFDPAEEEGDGWIKELEDDVRAECEEKYGHV 540
Query: 582 KHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
HI ++ ++ G +YL+F+ Q A + L+GR+F G+ I+A +V Y + F
Sbjct: 541 VHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYSSLF 594
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 218/414 (52%), Gaps = 30/414 (7%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 190 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 249
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
D SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 250 KDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPF----HRLYV 305
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L++VFEPFG ++ VQL +E G +G+GFVQF AR AL +
Sbjct: 306 GNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFD 365
Query: 418 IVGRAIKVSAVTDQSG----------LQDLGA--NTTGDFDDDEGGGLSLNARSRALLMQ 465
+ GR I+V D+ Q GA N G GG ++A
Sbjct: 366 LAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGG-----RGAQAGGSG 420
Query: 466 KLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGT 525
DR+G + A++ T + A + + L+ L + P +
Sbjct: 421 NFDRAGGRDNDKAAGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPAVEPKPDE 476
Query: 526 ALQVPTASV---PIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKL 581
+VP + P+ T+ + S C+LL+NMFDP E + + ++++DV EC K+G +
Sbjct: 477 KRKVPKPQLNAKPLPVTVNMASRCVLLRNMFDPAEEEGDGWIKELEDDVRAECEEKYGHV 536
Query: 582 KHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
HI ++ ++ G +YL+F+ Q A + L+GR+F G+ I+A +V Y + F
Sbjct: 537 VHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYSSLF 590
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 209/440 (47%), Gaps = 90/440 (20%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K+E + ERD+RTVF Q+ + RD+ FF + G V + +++ DR S+RSKGVG
Sbjct: 170 KREATPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVNEAQIVKDRISQRSKGVG 229
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
YVEF + SV A+ L+GQ LLG P++V+ +EAEKN NS A + + P+
Sbjct: 230 YVEFKNEESVTQALQLTGQKLLGIPIIVQLTEAEKNRQVRNSETATGAHPNSIPF----H 285
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLN 413
RLYVGN+HFN+TE L+ VFEPFG +E VQL D+ G +G+GFVQ+ AR AL
Sbjct: 286 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKM 345
Query: 414 GQLEIVGRAIKVSAVTDQ-------------------------SGLQDLGANTTG----- 443
++ GR I+V D+ SG G T+
Sbjct: 346 NGFDLAGRPIRVGLGNDKFTPESTANMLQRFPGQNQAYQGSAFSGAGGRGPQTSAFDRAG 405
Query: 444 -----------DFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
DD + G++ N SR LM+KL R+ A+ A + PL
Sbjct: 406 GRDSEKSGGASALDDTDVAGVNFNNYSRDALMRKLARTDEASNGADERQVLKPKTEIKPL 465
Query: 493 PTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNM 552
P + + S C++L NM
Sbjct: 466 PV--------------------------------------------NVSMASRCVVLHNM 481
Query: 553 FDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRAL 611
FDP+ E +++ ++++DV E K+G++ HI V+ +S G +YL+F+ Q A R L
Sbjct: 482 FDPEEEDGDDWAKELEDDVRQEAEKKYGRVVHIAVDPNSKGDIYLKFDKVQGGENAIRGL 541
Query: 612 HGRWFAGKMITATFMVPQTY 631
+GR+F G+MI A+ +V Y
Sbjct: 542 NGRYFGGRMIDASPVVDAVY 561
>gi|17543644|ref|NP_500025.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
gi|373220572|emb|CCD74059.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
Length = 580
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 206/425 (48%), Gaps = 78/425 (18%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
PK K ++ E ERDQRT+ QI RD+ EFFS G VRDVR+I D + RSK
Sbjct: 155 PKNAKLELTAE---ERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSK 211
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
G+ YVEF+D SVP+ +AL+GQ L+G P+ ++ + AE+N +NSS+A ++ G P +
Sbjct: 212 GICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRA-ANSSVA-STLGFVAPGNK 269
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G + V NLH + E +R +FE FG +E + L +D +GF + F +DA+ +
Sbjct: 270 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSC 329
Query: 411 NLNGQLEIVGRAIKVS--------------AVTDQSGLQDLGANTTGDFDDDEGGGLSLN 456
E+ GR I++S A Q L D+G G SL
Sbjct: 330 EQLNNFELAGRCIRLSIKQESQAPAVKKEEASIHQRSLDDVGDRQ----------GFSLG 379
Query: 457 ARSRALLMQKLDR-SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGT 515
A R LM KL + +GS + SA A
Sbjct: 380 AGGRQQLMAKLAQGTGSGMELTASAQMAA------------------------------- 408
Query: 516 VPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC 575
H G Q+P+ + ++C LL NMFDP ET +D DI+EDV +C
Sbjct: 409 --QHAGH----SQIPS----------IATQCFLLSNMFDPSKETEPAWDHDIREDVIEQC 452
Query: 576 SKFGKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
G H+FV+K S G VY++ + A A ALHGRWF+GK+ITA ++ +Y
Sbjct: 453 LAHGGALHVFVDKGSEQGNVYVKCPSIVIAHQAVSALHGRWFSGKVITANYVPVNSYHDL 512
Query: 635 FPDSI 639
FPD++
Sbjct: 513 FPDAV 517
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 218/414 (52%), Gaps = 30/414 (7%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 194 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEF 253
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYV 357
D SVP+AI L+GQ LLG P++ + +EAEKN N + + P+ RLYV
Sbjct: 254 KDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPF----HRLYV 309
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLE 417
GN+HF++TE L++VFEPFG ++ VQL +E G +G+GFVQF AR AL +
Sbjct: 310 GNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFD 369
Query: 418 IVGRAIKVSAVTDQSG----------LQDLGA--NTTGDFDDDEGGGLSLNARSRALLMQ 465
+ GR I+V D+ Q GA N G GG ++A
Sbjct: 370 LAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGG-----RGAQAGGSG 424
Query: 466 KLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGT 525
DR+G + A++ T + A + + L+ L + P +
Sbjct: 425 NFDRAGGRDNDKAAGGASALDDTDV----AGVNFNNYSRDALMRKLARTDEPAVEPKPDE 480
Query: 526 ALQVPTASV---PIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKL 581
+VP + P+ T+ + S C+LL+NMFDP E + + ++++DV EC K+G +
Sbjct: 481 KRKVPKPQLNAKPLPVTVNMASRCVLLRNMFDPAEEEGDGWIKELEDDVRAECEEKYGHV 540
Query: 582 KHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
HI ++ ++ G +YL+F+ Q A + L+GR+F G+ I+A +V Y + F
Sbjct: 541 VHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYSSLF 594
>gi|268553731|ref|XP_002634852.1| Hypothetical protein CBG13969 [Caenorhabditis briggsae]
Length = 545
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 212/416 (50%), Gaps = 59/416 (14%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
PK K ++ E ERDQRT+ QI RD+ EFFS G VRDVR+I D + RSK
Sbjct: 152 PKNAKLELSAE---ERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSK 208
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
G+ YVEF+D SVP+ +AL+GQ L+G P+ ++ + AE+N + +NSS+A ++ G P
Sbjct: 209 GICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRI-ANSSVA-STLGFVAPGGK 266
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G ++ V NLH + + L +VF+ FG ++ + + D G KGF + F ++A+ A
Sbjct: 267 GPAQVLVENLHPKIDDKMLGEVFDSFGRIDKLDVEKDMNGENKGFAVITFRNADEAQKAC 326
Query: 411 NLNGQLEIVGRAIKVSA---VTDQSGLQDLGANTTGDFDDDEG--GGLSLNARSRALLMQ 465
E+ GR ++++ T Q ++ A+ DD G G SL A R LM
Sbjct: 327 EQLNDFEVAGRKMRLTIKQEPTPQQSIKKEEASIHQRSLDDVGDRQGFSLGAGGRQQLMA 386
Query: 466 KLDR-SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLG 524
KL + +GS + SA A H G
Sbjct: 387 KLAQGTGSGMELTASAQMAA---------------------------------QHAGNS- 412
Query: 525 TALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHI 584
Q+P+ + ++C LL NMFDP ET ++D DI+EDV +C+ G H+
Sbjct: 413 ---QIPS----------IATQCFLLSNMFDPAKETEPQWDHDIREDVIEQCACHGGALHV 459
Query: 585 FVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
FV+K S G VY++ + A A ALHGRWF+GK+ITA ++ +Y FPD++
Sbjct: 460 FVDKGSQQGNVYVKCPSIAIAHQAVSALHGRWFSGKVITANYVPVNSYHDLFPDAV 515
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 146/460 (31%), Positives = 212/460 (46%), Gaps = 107/460 (23%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
K ++ P + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSKG
Sbjct: 161 KGSRDGTPPLTEDERDKRTVFVQQLAARLRSKELIAFFEKVGPVKEAQIVKDRVSGRSKG 220
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
VGYVEF + SV AI L+GQ LLG P++ + +EAEK N + A P
Sbjct: 221 VGYVEFKNEESVAAAIQLTGQKLLGIPIIAQLTEAEK-----NRQVRTAEPASNNPNQIP 275
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
RLYVGN+HF++TE L+ VFEPFG +E VQL ++ G +G+GFVQF AR AL
Sbjct: 276 FHRLYVGNIHFSITEGDLQNVFEPFGELEFVQLQKEDQGRSRGYGFVQFRDPHQAREALE 335
Query: 412 LNGQLEIVGRAIKVSAVTDQ-------SGLQ----------------------------- 435
++ GR I+V D+ S LQ
Sbjct: 336 KMNGFDLAGRPIRVGLGNDKFTPESTASLLQRFQGQSHQQQFQGSAFSGAGGRGPQASGG 395
Query: 436 -------------DLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVT 482
D GA DD + GG++ N SR LM+KL R+
Sbjct: 396 GGGAFDRAGGRDNDKGAGGASALDDTDVGGVNFNNYSRDALMRKLARTDEP--------A 447
Query: 483 PAVNS------TALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPI 536
PA N A P + + PP PI
Sbjct: 448 PATNGRDDRREVAKPR------------TEVKPP------------------------PI 471
Query: 537 FDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVY 595
+ S C++L+NMFDP ET E ++ ++++DV E K+G + HI ++ +S G +Y
Sbjct: 472 --NVNTASRCVVLRNMFDPAEETGENWEKELEDDVRAEAEEKYGHVVHISLDPNSQGDIY 529
Query: 596 LRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
L+F+ Q A + L+GR+F G+MI+AT +V Y F
Sbjct: 530 LKFDRVQGGENAIQGLNGRYFGGRMISATPVVDAVYSTMF 569
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 203/398 (51%), Gaps = 77/398 (19%)
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYV 295
EP+ D + + R+VF Q+ + RD+ FF G V D R++ DR SRRSKG+GYV
Sbjct: 224 EPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSRRSKGIGYV 282
Query: 296 EFYDVMSVPMAIALSGQ-----PLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
EF + V AI LSG P+MV+ +EAE+N + G + P+
Sbjct: 283 EFRTIELVEKAIGLSGTVVMGL-----PIMVQLTEAERNKTHAGDGSINLPPGVSAPHGA 337
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNA 409
LYVG+LHFN+TE ++QVFE FG +E V L D TG KG+ FVQ+ R EDAR A
Sbjct: 338 ---ILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMA 394
Query: 410 LNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
L E+ GR ++V+ V ++ + T D D+ GGG +LNA SR LMQKL R
Sbjct: 395 LQQMEGFELAGRTLRVNTVHEKGTTK----YTQQDSLDESGGG-NLNAASRQALMQKLAR 449
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
+ PA + P P A+Q
Sbjct: 450 TDQ----------PAPRPEPVQRPNIP----------------------------QAMQ- 470
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEK 588
S +LLKNMFDP ET +++D ++ +DV+GEC SK+GK+ I VEK
Sbjct: 471 --------------SRSVLLKNMFDPDEETEKDWDRELAQDVKGECESKYGKVLAIKVEK 516
Query: 589 DSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
DS G +Y++F++ A A + L+GRWF G+ ++A F+
Sbjct: 517 DSQGEIYVKFDSIDYAQKAIQGLNGRWFGGRQVSAVFI 554
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 203/398 (51%), Gaps = 77/398 (19%)
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYV 295
EP+ D + + R+VF Q+ + RD+ FF G V D R++ DR SRRSKG+GYV
Sbjct: 224 EPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSRRSKGIGYV 282
Query: 296 EFYDVMSVPMAIALSGQ-----PLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
EF + V AI LSG P+MV+ +EAE+N + G + P+
Sbjct: 283 EFRTIELVEKAIGLSGTVVMGL-----PIMVQLTEAERNKTHAGDGSINLPPGVSAPHGA 337
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNA 409
LYVG+LHFN+TE ++QVFE FG +E V L D TG KG+ FVQ+ R EDAR A
Sbjct: 338 ---ILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMA 394
Query: 410 LNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
L E+ GR ++V+ V ++ + T D D+ GGG +LNA SR LMQKL R
Sbjct: 395 LQQMEGFELAGRTLRVNTVHEKGTTK----YTQQDSLDESGGG-NLNAASRQALMQKLAR 449
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
+ PA + P P A+Q
Sbjct: 450 TDQ----------PAPRPEPVQRPNIP----------------------------QAMQ- 470
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEK 588
S +LLKNMFDP ET +++D ++ +DV+GEC SK+GK+ I VEK
Sbjct: 471 --------------SRSVLLKNMFDPDEETEKDWDRELAQDVKGECESKYGKVLAIKVEK 516
Query: 589 DSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
DS G +Y++F++ A A + L+GRWF G+ ++A F+
Sbjct: 517 DSQGEIYVKFDSIDYAQKAIQGLNGRWFGGRQVSAVFI 554
>gi|25148310|ref|NP_741301.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
gi|373220574|emb|CCD74061.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
Length = 435
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 207/425 (48%), Gaps = 78/425 (18%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
PK K ++ E ERDQRT+ QI RD+ EFFS G VRDVR+I D + RSK
Sbjct: 10 PKNAKLELTAE---ERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSK 66
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
G+ YVEF+D SVP+ +AL+GQ L+G P+ ++ + AE+N +NSS+A ++ G P +
Sbjct: 67 GICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRA-ANSSVA-STLGFVAPGNK 124
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G + V NLH + E +R +FE FG +E + L +D +GF + F +DA+ +
Sbjct: 125 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSC 184
Query: 411 NLNGQLEIVGRAIKVS--------------AVTDQSGLQDLGANTTGDFDDDEGGGLSLN 456
E+ GR I++S A Q L D+G + G SL
Sbjct: 185 EQLNNFELAGRCIRLSIKQESQAPAVKKEEASIHQRSLDDVG----------DRQGFSLG 234
Query: 457 ARSRALLMQKLDR-SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGT 515
A R LM KL + +GS + SA A
Sbjct: 235 AGGRQQLMAKLAQGTGSGMELTASAQMAA------------------------------- 263
Query: 516 VPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC 575
H G Q+P+ + ++C LL NMFDP ET +D DI+EDV +C
Sbjct: 264 --QHAGH----SQIPS----------IATQCFLLSNMFDPSKETEPAWDHDIREDVIEQC 307
Query: 576 SKFGKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
G H+FV+K S G VY++ + A A ALHGRWF+GK+ITA ++ +Y
Sbjct: 308 LAHGGALHVFVDKGSEQGNVYVKCPSIVIAHQAVSALHGRWFSGKVITANYVPVNSYHDL 367
Query: 635 FPDSI 639
FPD++
Sbjct: 368 FPDAV 372
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 211/436 (48%), Gaps = 91/436 (20%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + ++++EFF +AG V +++ DR S RSKGVGYVEF S+P
Sbjct: 206 ERDRRTVFVQQLAARLRTKELHEFFEQAGPVAAAQIVKDRVSNRSKGVGYVEFKSEESLP 265
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
A+ L+GQ L G PV+V+P+EAEKN + + A+G S RLYVGN+HF++
Sbjct: 266 AALQLTGQKLAGIPVIVQPTEAEKNRQVRTTENSNANGAQQN--SVLFHRLYVGNIHFSI 323
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TE LR VF PFG + VQL ++ G +G+GFV++ +AR AL ++ GR I+
Sbjct: 324 TEPDLRTVFGPFGELRFVQLQKEDNGRSRGYGFVEYNDPANAREALEKMNGFDLAGRPIR 383
Query: 425 V------------------------------------------SAVTDQSGL--QDLGAN 440
V S+ D++G D G
Sbjct: 384 VGLGNDKFTPESTANIMQRYPGTNGGNQGQGYPGRNGQANGPQSSNFDRAGGRDNDKGGG 443
Query: 441 TTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGA 500
+ DD + G++ N+ SR LM+KL R+ A++
Sbjct: 444 ASA-LDDTDVAGVNFNSYSRDALMRKLARTDEASS------------------------- 477
Query: 501 ASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETY 560
PP Q L+ T P+ + + S C+LLKNMFDP E+
Sbjct: 478 -------APPERQ-----------QILKPKTEIKPLPVNVNMASRCVLLKNMFDPAEESG 519
Query: 561 EEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGK 619
E++ D++ DV E K+G + HI V+ +S G +YL+F+ Q A + L+GR+F G
Sbjct: 520 EDWIKDLENDVREEAEKKYGHVVHISVDPNSNGDIYLKFDKVQGGENAIKGLNGRYFGGN 579
Query: 620 MITATFMVPQTYEAKF 635
+ITA +V Y + F
Sbjct: 580 IITAAPVVDAVYSSLF 595
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/408 (35%), Positives = 214/408 (52%), Gaps = 30/408 (7%)
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
P + ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSKGVGYVEF +
Sbjct: 176 PLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGVGYVEFKN 235
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
SV +A+ L+GQ LLG PV+V+ +EAEKN N AS G P S RLYVGN
Sbjct: 236 EDSVQLALQLTGQKLLGIPVIVQHTEAEKNRQARNPD---ASNG--HPNSIPFHRLYVGN 290
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
+HFN+TE L+ VFEPFG +E VQL D+ G +G+GFVQF AR AL ++
Sbjct: 291 IHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLA 350
Query: 420 GRAIKVSAVTDQSGLQDLGANTTGDFDDDEGG--GLSLNARSRALLMQKLDRSG---SAT 474
GR I+V D+ + AN F + G G + + DR+G S
Sbjct: 351 GRPIRVGLGNDKFTPEST-ANLMHKFSGNNQGFQGSAFSGAGGRGQQSAFDRAGGRDSEK 409
Query: 475 TIAGSAV----TPAVNSTALPLPTAPLLGAASAVSTLVPPLVQG-TVPTHPG-QLGTALQ 528
T SA+ VN + L+ L + PT+ + L+
Sbjct: 410 TGGASALDDTDVAGVNFNNY------------SRDALMRKLARTDEAPTNGNDERQQILK 457
Query: 529 VPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVE 587
T + P+ + + S C++L NMFDP E +++ +++++V E ++G + HI V+
Sbjct: 458 PKTETKPLPVNVNMASRCVVLHNMFDPTEEEGDDWVKELEDEVRQEAEERYGHVVHISVD 517
Query: 588 KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+S G +YL+F+ Q A + L+GR+F G+MI A+ +V Y + F
Sbjct: 518 PNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDASPVVDAVYSSLF 565
>gi|443896055|dbj|GAC73399.1| transcriptional coactivator CAPER [Pseudozyma antarctica T-34]
Length = 662
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 213/460 (46%), Gaps = 116/460 (25%)
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYVE 296
PE++ D R+VF Q+ + +RD+ EFF G V+DVR++MDR +RRSKGVGYVE
Sbjct: 254 PEINDYED-RSVFCSQLSARLGQRDLGEFFEEHLGEGAVQDVRIVMDRVTRRSKGVGYVE 312
Query: 297 FYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR--- 353
F VP AI L+G+ L G P++V+ ++A +N S++A G + P GG
Sbjct: 313 FAARELVPKAIELTGKVLFGIPIVVQRTDAGRNGPPPISAVA-PHGVASHPALGGPHLDA 371
Query: 354 -------------------------------------------RLYVGNLHFNMTEDQLR 370
RLYVG+LHF++T++ ++
Sbjct: 372 RALANVPMPMQYHQAGVPIHLNVNAPPGPRAMRPGPNMPNTEARLYVGSLHFSLTDENVK 431
Query: 371 QVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 429
VFEPFG +E V L + TG KGF F+QF +DAR A E+ GRAI+V V
Sbjct: 432 AVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHADDARKAHEAMNGFELAGRAIRVGNVN 491
Query: 430 DQ-SGLQDLGA------------NTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTI 476
+ SG +G T FDD GGG LN RA LMQKL R+ +
Sbjct: 492 AKGSGSSYMGGPGPNSQSGGHLPQLTSAFDD--GGGAGLNPERRAALMQKLARNNEPSPA 549
Query: 477 AGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPI 536
A A TA Q A +P
Sbjct: 550 ASDA-------------------------------------------NTATQERPAGIPE 566
Query: 537 FDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVY 595
S LLLKNMFDP ET ++D D+ EDV+ EC +K+G + I VEK+SAG +Y
Sbjct: 567 -----ATSTSLLLKNMFDPAEETEADWDKDLAEDVKDECQAKYGPVTRIHVEKESAGEIY 621
Query: 596 LRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
L F + ++ A L+GR+F GK I+A ++ +AK
Sbjct: 622 LTFADLDASRKALDGLNGRFFGGKPISAQYIPDAFVQAKL 661
>gi|395830356|ref|XP_003788297.1| PREDICTED: RNA-binding protein 39 [Otolemur garnettii]
Length = 453
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 235/482 (48%), Gaps = 89/482 (18%)
Query: 162 ERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERES 221
ER RS ER+RSRDRE R++ + I + +K + S
Sbjct: 46 ERKRSKSKERKRSRDRE---RKKXXXXXXXXXSGPKFNSAIRGKIGLPHSIKLSRRRSRS 102
Query: 222 RDNDKESRRP-KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL 280
+ ++ + P +E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+
Sbjct: 103 KSPFRKDKSPVREPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRM 159
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGA 340
I DRNSRRSKG+ YVEF DV SVP+AI L+GQ +LG P++V+ S+
Sbjct: 160 ISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQ--------------- 204
Query: 341 SGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQ 399
+E +QL +D ETG KG+GF+
Sbjct: 205 --------------------------------------IESIQLMMDSETGRSKGYGFIT 226
Query: 400 FARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNAR 458
F+ E A+ AL LNG E+ GR +KV VT+++ A++ D D+ E G+ L
Sbjct: 227 FSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTT 283
Query: 459 SRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT 518
R LM +L G + PA AL + + GA + + T L Q T +
Sbjct: 284 GRLQLMARLAEG------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEAS 333
Query: 519 HPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKF 578
+ + T +C L NMF+P+ E +D +IK+DV EC+K
Sbjct: 334 ALAAAASVQPLAT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKH 380
Query: 579 GKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
G + HI+V+K+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPD
Sbjct: 381 GGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPD 440
Query: 638 SI 639
S+
Sbjct: 441 SM 442
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 212/424 (50%), Gaps = 48/424 (11%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K++ EP D ERD+RTVF Q+ + +++ FF G V + +++ DR S RSKGVG
Sbjct: 233 KRKSPEP-TDDERDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSKGVG 291
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA- 352
YVEF D SV AI L+GQ LLG P++ + +EAEKN ++ GT S G
Sbjct: 292 YVEFKDEESVQKAIQLTGQKLLGIPIIAQLTEAEKNRQARHTE-------GTATQSNGIP 344
Query: 353 -RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
RLYVGN+HF++TED L+ VFEPFG +E VQL +E G KG+GFVQF A+ AL
Sbjct: 345 FHRLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEEQGRSKGYGFVQFIDPAQAKEALE 404
Query: 412 LNGQLEIVGRAIKVSAVTD-------QSGLQDLGANTTGDFDDDEG------GGLSLNAR 458
E+ GR I+V D QS LQ + G +G GG +A
Sbjct: 405 KMNGFELAGRPIRVGLGNDKFTPESTQSLLQRFASQ--GQAAAFQGSSFSGMGGRGAHAG 462
Query: 459 SRALL----MQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQG 514
+A + D++G A+ + + V S L V P
Sbjct: 463 GQANFDRASGRDADKTGGASALDDTDVAGVNFSNYSRDALMRKLARTDDSEEKVAPKTMQ 522
Query: 515 TVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGE 574
PT P + P PS C+LLKN+++ ET + +++EDV+ E
Sbjct: 523 KKPTGP------VDQPA-----------PSRCVLLKNVYNQAEETEPGWQKELEEDVKVE 565
Query: 575 C-SKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYE 632
C K+G++ HI + D+ G +Y++F+ Q A R L+GR + G+MITA ++V Y
Sbjct: 566 CDEKYGQVVHIGLALDNNDGEIYIKFDRKQGGENAIRGLNGRMYGGRMITAQYVVDAVYN 625
Query: 633 AKFP 636
FP
Sbjct: 626 MNFP 629
>gi|308473560|ref|XP_003099004.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
gi|308267807|gb|EFP11760.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
Length = 651
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 209/416 (50%), Gaps = 58/416 (13%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
PK K ++ PE ERDQRT+ QI RD+ EFFS G VRDVR+I D + RSK
Sbjct: 226 PKNAKLELSPE---ERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSK 282
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
G+ YVEF+D SVP+ +AL+GQ L+G P+ ++ + AE+N +NSS+A G +
Sbjct: 283 GICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRA-ANSSMASTLGFVAPGAAK 341
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G + V NLH +TE+ +R++FE FG +E +++ G + + F ++A+ ++
Sbjct: 342 GPAHVLVENLHPKITENMIREIFESFGRIEKLEMEKLSNGDNRETAVIVFRNADEAQKSI 401
Query: 411 NLNGQLEIVGRAIKVSAVTDQSGLQDLG---ANTTGDFDDDEG--GGLSLNARSRALLMQ 465
E+ GR I++S D + A+ DD G G SL A R LM
Sbjct: 402 EQLNNFELAGRQIRLSIKQDAPPPPQIKKEEASIHQRSLDDVGDRQGFSLGAGGRQQLMA 461
Query: 466 KLDR-SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLG 524
KL + +GS + SA A H G
Sbjct: 462 KLAQGTGSGMELTASAQMAA---------------------------------QHAGN-- 486
Query: 525 TALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHI 584
Q+P+ + ++C LL NMFDP ET +D DI+EDV +C++ G H+
Sbjct: 487 --SQIPS----------IATQCFLLSNMFDPSKETEPAWDHDIREDVIEQCAQHGGALHV 534
Query: 585 FVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
FV+K S G VY++ + A A ALHGRWF+GK+ITA ++ +Y FPD++
Sbjct: 535 FVDKGSEQGNVYVKCPSIAIAHQAVSALHGRWFSGKVITANYVPVNSYHDLFPDAV 590
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 209/415 (50%), Gaps = 63/415 (15%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P+ + P + ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSK
Sbjct: 167 PRVRDGTPPPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 226
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN-LVQSNSSIAGASGGGTGPYS 349
GVGYVEF V A+ L+GQ LLG PV+V+ +EAEKN V++ S G P S
Sbjct: 227 GVGYVEFKSEEHVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTEST------GHHPNS 280
Query: 350 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNA 409
RLYVGN+HF++TE L+ VFEPFG +E VQL D+ G +G+GFVQ+ E N
Sbjct: 281 IPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQYFTPESTANL 340
Query: 410 LN----LNGQLEIVGRAIK-------VSAVTDQSGLQDLGANTTGD-FDDDEGGGLSLNA 457
L N + G A ++ D++G +D T DD + G++ N
Sbjct: 341 LQRFQGQNHHQQFQGSAFSGAGGRGPATSNFDRAGARDNEKGTGASALDDTDVAGVNFNN 400
Query: 458 RSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVP 517
SR LM+KL R+ PP VP
Sbjct: 401 YSRDALMRKLARTDE------------------------------------PP--ASVVP 422
Query: 518 THPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-S 576
L+ T + P+ + + S C++L NMFDP E E++ ++++DV E +
Sbjct: 423 DR-----QILKPKTETKPLPVNVNMASRCVVLHNMFDPAEEEGEDWIKELEDDVREEAEA 477
Query: 577 KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTY 631
K+G + HI ++ +SAG +YL+F+ Q A + L+GR+F G+MITA +V Y
Sbjct: 478 KYGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITAAPVVDAVY 532
>gi|301624539|ref|XP_002941556.1| PREDICTED: RNA-binding protein 39 [Xenopus (Silurana) tropicalis]
Length = 420
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/293 (45%), Positives = 173/293 (59%), Gaps = 28/293 (9%)
Query: 226 KESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN 285
K+ P+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRN
Sbjct: 130 KQKTPPREPETILSPE---ERDARTVFCMQLAARIRSRDLEDFFSAVGKVRDVRIISDRN 186
Query: 286 SRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT 345
SRRSKG+ YVEF D+ SVP+AI L+GQ LLG P++V+ S+AEKN + + S+ G
Sbjct: 187 SRRSKGIAYVEFCDIQSVPLAIGLTGQRLLGVPIIVQVSQAEKNRLAAMSN--NLQRGNP 244
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE--TGHCKGFGFVQFARL 403
GP RLYVG+LHFN+TED LR +FEPFG +E +QL L E TG KGFGF+ F
Sbjct: 245 GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIENIQL-LKEPDTGRSKGFGFITFTDA 298
Query: 404 EDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRAL 462
E AR AL LNG E+ GR +KV VTD L+ G + D D+ E G+ L A R
Sbjct: 299 ECARRALEQLNG-FELAGRPMKVGHVTDH--LEGGGEASFLDSDELERTGIDLGATGRLQ 355
Query: 463 LMQKLDR---------SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVST 506
LM KL + +A + G+ A+N T L +P L A ++S
Sbjct: 356 LMAKLAEGTGLQIPLAAQAALQLGGAIPLTALNPTLTAL--SPALNLAQSISA 406
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 215/454 (47%), Gaps = 94/454 (20%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K+ P + ERD+RTVF Q+ + +D+ FF + G V++ +++ DR S RSKGVG
Sbjct: 195 KRSSSPPLTEDERDRRTVFVQQLAARLRTKDLIAFFEKVGPVKEAQIVKDRVSGRSKGVG 254
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
YVEF + SVP AI L+GQ L+G P++ + +EAEKN Q+ + P+
Sbjct: 255 YVEFKNEESVPAAIQLTGQKLMGIPIIAQLTEAEKNR-QARTGDGNNGNNNGVPF----H 309
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLN 413
RLYVGN+HF++TE L+ VFEPFG +E VQL +E G +G+GFVQF A+ AL
Sbjct: 310 RLYVGNIHFSITESDLQNVFEPFGELEFVQLQKEEGGRSRGYGFVQFRDPAQAKEALEKM 369
Query: 414 GQLEIVGRAIKV-----------------------------SAVTDQSGL---------- 434
++ GR I+V SA + G
Sbjct: 370 NGFDLAGRPIRVGLGNDKFTPESTANLLQRFNGQGPPNFQGSAFSGSGGRGAHAGGSGGT 429
Query: 435 --------QDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVN 486
D GA DD + G++ N SR LM+KL R+ G
Sbjct: 430 FDRAGGRDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLARTDEPADTNG-------- 481
Query: 487 STALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSEC 546
+ ++ P VQ ++P+ ++ S C
Sbjct: 482 ---------------ADKQKIIKPAVQA----------------ARTLPV--SVNQASRC 508
Query: 547 LLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAF 605
++LKNMFDP E E + ++++DV+ EC +K+G + HI ++ ++ G +Y++F+ Q
Sbjct: 509 VVLKNMFDPAEEEGESWMKELEDDVKEECQAKYGTVVHIALDPNTQGDIYVKFDTVQGGE 568
Query: 606 AAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
A + L+GR+F G+ ITA +V Y + F ++
Sbjct: 569 NAIKGLNGRFFGGRQITAQPVVDAVYRSLFSKAV 602
>gi|341877935|gb|EGT33870.1| hypothetical protein CAEBREN_20987 [Caenorhabditis brenneri]
Length = 528
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 205/424 (48%), Gaps = 76/424 (17%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
PK K ++ E ERDQRT+ QI RD+ EFFS G VRDVR+I D + RSK
Sbjct: 105 PKNAKLELSAE---ERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSK 161
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
G+ YVEF+D SVP+ +AL+GQ L+G P+ ++ + AE+N +NSS+A G +
Sbjct: 162 GICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRA-ANSSMASTLGFVAPGAAK 220
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G + V NLH + L+ +F+ FG +E +++ + G +GF + F E+A+ A
Sbjct: 221 GPAHVVVENLHPKIDAKMLQGIFDAFGRIEKLEMETEHNGDNRGFAVISFKNSEEAQKAC 280
Query: 411 NLNGQLEIVGRAIKVS-------------AVTDQSGLQDLGANTTGDFDDDEGGGLSLNA 457
E+ GR I++S A Q L D+G G SL A
Sbjct: 281 EQLNNFELAGRNIRLSIKQDAVPQHKKEEASIHQRSLDDIGDRQ----------GFSLGA 330
Query: 458 RSRALLMQKLDR-SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTV 516
R LM KL + +GS + SA A
Sbjct: 331 GGRQQLMAKLAQGTGSGMELTASAQMAA-------------------------------- 358
Query: 517 PTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS 576
H G Q+P+ + ++C LL NMFDP ET +D+DI+EDV +C
Sbjct: 359 -QHAGN----SQIPS----------IATQCFLLSNMFDPSKETEPNWDVDIREDVIEQCL 403
Query: 577 KFGKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+ G H+FV+K S G VY++ + A A ALHGRWF+GK+ITA ++ +Y F
Sbjct: 404 QHGGALHVFVDKGSEQGNVYVKCPSIAIAHQAVSALHGRWFSGKVITANYVPVNSYHDLF 463
Query: 636 PDSI 639
PD++
Sbjct: 464 PDAM 467
>gi|429243189|ref|NP_594422.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|380865416|sp|O13845.2|RSD1_SCHPO RecName: Full=RNA-binding protein rsd1
gi|347834186|emb|CAB10118.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe]
Length = 603
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 204/397 (51%), Gaps = 35/397 (8%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + R++Y+FF +AG VRD +++ D+ S RSKGV YVEF SV
Sbjct: 236 ERDRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQ 295
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
AIALSG+ LLG PV+V+ +EAEKN ++ + P+ RL V N+HFN+
Sbjct: 296 AAIALSGKRLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPF----HRLCVSNIHFNL 351
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
T++ ++ +FEPFG +E V L D+ KGFG++Q+ ARNAL ++ GR ++
Sbjct: 352 TDEDVKAIFEPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMR 411
Query: 425 VSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPA 484
V D+ TT L+ RS Q R+G ++T A
Sbjct: 412 VCLGNDK-----FTTETTSSMLKRFDETLARQERS-----QPSQRNGGSSTYESQDYREA 461
Query: 485 VNSTALPLPTAPLLGAASAVS--TLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGV 542
P +P + ++ L+ L + + +L + + P +
Sbjct: 462 A-------PLSPTEEESRPITRDELMKKLARSEDISDNSKLVSEPEPP-----------I 503
Query: 543 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENT 601
S C LL+NMF+P ET + ++++DV+ EC K+GK+ HI V + G ++++FEN
Sbjct: 504 RSRCALLENMFNPAEETSPNWVQELEQDVKEECDEKYGKVVHIAVVPNELGQIFVKFENA 563
Query: 602 QSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
A A LH RWF G+ I A+ + Y KFP++
Sbjct: 564 DFAEKAITGLHQRWFGGRTIKASILPETDYYFKFPNA 600
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 213/410 (51%), Gaps = 33/410 (8%)
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
P + ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSKGVGYVEF
Sbjct: 175 PLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISGRSKGVGYVEFKS 234
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNS-SIAGASGGGTGPYSGGARRLYVG 358
+V A+ L+GQ LLG PV+V+ +EAEKN N S +G P S RLYVG
Sbjct: 235 EDAVQQALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSTSGH------PNSIPFHRLYVG 288
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
N+HFN+TE L+ VFEPFG +E VQL D+ G +G+GFVQF AR AL ++
Sbjct: 289 NIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDL 348
Query: 419 VGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRA---LLMQKLDRSG---S 472
GR I+V D+ + AN F + GG +A S A DR+G S
Sbjct: 349 AGRPIRVGLGNDKFTPEST-ANLMHKFSGNNQGGFQGSAFSGAGGRGQQSTFDRAGGRDS 407
Query: 473 ATTIAGSAV----TPAVNSTALPLPTAPLLGAASAVSTLVPPLVQG-TVPTHPGQLGTAL 527
T SA+ VN + L+ L + PT+ + +
Sbjct: 408 EKTGGASALDDTDVAGVNFNNY------------SRDALMRKLARTDEAPTNGNEERQQI 455
Query: 528 QVP-TASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIF 585
P T + P+ + + S C++L NMFD E +++ +++++V E ++G + HI
Sbjct: 456 LKPKTETKPLPVNVNMASRCVVLHNMFDATEEEGDDWVKELEDEVRQEAEQRYGHVVHIS 515
Query: 586 VEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
V+ +S G +YL+F+ Q A + L+GR+F G+MI A+ +V Y + F
Sbjct: 516 VDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDASPVVDAVYSSLF 565
>gi|387193898|gb|AFJ68729.1| rna binding motif protein 39b, partial [Nannochloropsis gaditana
CCMP526]
Length = 456
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 223/425 (52%), Gaps = 56/425 (13%)
Query: 230 RPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRS 289
R KE+KE E +DQRTVF Q+ +KADER V FF GKVR V ++ DR++ +
Sbjct: 68 RTKEQKELDELT----KDQRTVFISQLVMKADERAVRAFFENFGKVRSVVMLRDRSTGKH 123
Query: 290 KGVGYVEFYDVMSVPMAIALSGQPLLGQ--PVMVKPSEAEKNLVQSNSSIAGAS---GGG 344
KG YVE D+ ++P + ++ Q Q P+ VK SEAEKN + +IA + GG
Sbjct: 124 KGFAYVEMADLETIPNVLLMNDQVPDFQKFPIAVKASEAEKNYLAKQEAIAKGTVRPDGG 183
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLE 404
G ++++GNLH N+TE+ L + +PFG V+ + L +E G KGF F F+++E
Sbjct: 184 RKRNVGQPNKVFLGNLHPNITEEDLMDLLKPFGEVQGLALAKNEEGVSKGFAFATFSKVE 243
Query: 405 DARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANT--------TGDFDDDEGGGLSLN 456
+A+ + G + + R IKV V D+ G++ + + TG++ D+ G L ++
Sbjct: 244 EAQTVMTQLGGVPLADRPIKVGPVNDR-GVEAVAMASSVPASGPATGNWRLDDAGVLPMD 302
Query: 457 ARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTV 516
A +RA LM KL G+A I +P+ P G
Sbjct: 303 AAARAELMSKL---GAAAGI------------QVPVSAGP-----------------GAQ 330
Query: 517 PTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS 576
QL + PI +G+PS LLLKNMFDP E + +++DI++DVE E
Sbjct: 331 QLQLQQLQQQQLLQQQPPPI---VGIPSRALLLKNMFDPAEEKDDGWELDIQDDVEDEGR 387
Query: 577 KFGKLKHIFVE-KDSAGFVYLRFENT--QSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
KFG+++H+ V+ K G VY+ F+ + A + +AL+GRWFAG+MI ++ Y
Sbjct: 388 KFGEVRHVRVDVKGPGGHVYMLFKEGEEEGAQKSAQALNGRWFAGRMIMVEYLPLARYLE 447
Query: 634 KFPDS 638
+PD+
Sbjct: 448 SYPDA 452
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 214/448 (47%), Gaps = 92/448 (20%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P++K++ + ERD+RTVF Q+ + R++ FF + G V + +++ DR S RSK
Sbjct: 141 PRDKQDATPVLNEDERDRRTVFVQQLAARLRSRELKAFFEKVGPVTEAQIVKDRISGRSK 200
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
GVGYVEF + SV A+ L+GQ LLG PV+V+ +EAEKN Q+ ++ G S P+
Sbjct: 201 GVGYVEFKNEDSVAPALQLTGQKLLGIPVIVQVTEAEKNR-QARTTEPGGSHPNHVPF-- 257
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
RLYVGN+HFN+TE L+ VF+PFG +E VQL DET +G+GFVQF AR AL
Sbjct: 258 --HRLYVGNIHFNVTEQDLQAVFDPFGELEFVQLQKDETNRSRGYGFVQFRDAGQAREAL 315
Query: 411 NLNGQLEIVGRAIKVSAVTDQ-------SGLQDLGANTTGD------------------- 444
++ GR I+V D+ + LQ +
Sbjct: 316 EKMNGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNASNQQGSSFSGSGGRGGQNSNF 375
Query: 445 ----------------FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNST 488
DD + GG++ N SR LM+KL R+ + GS P
Sbjct: 376 DRAGARDSEKTGGASALDDTDVGGVNFNNYSRDALMRKLARTDESNK--GSDERP----- 428
Query: 489 ALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLL 548
L+ T + P+ + S C++
Sbjct: 429 -------------------------------------VLKPRTETKPLPMNVNTASRCVV 451
Query: 549 LKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAA 607
L NMF+P E +++ ++++DV E K+G + HI V+ +S G +YL+F+ Q A
Sbjct: 452 LHNMFEPDEEEGDDWVKELEDDVRQEAEEKYGHVVHISVDPNSKGDIYLKFDKVQGGENA 511
Query: 608 QRALHGRWFAGKMITATFMVPQTYEAKF 635
R L+GR+F G+MI A+ +V Y + F
Sbjct: 512 IRGLNGRYFGGRMIDASPVVDAVYSSLF 539
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 183/329 (55%), Gaps = 34/329 (10%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + S ++ + + T L A V
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASV 418
Query: 530 -PTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A ++C L NMF+P+
Sbjct: 419 QPLA-----------TQCFQLSNMFNPQT 436
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 203/433 (46%), Gaps = 91/433 (21%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFS-RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
ERD RTVF Q+ + + FF AG V + +++ DR S RSKGVGYVEF D +V
Sbjct: 173 ERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGVGYVEFKDEETV 232
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
A+ L+G+PL G P++VK +EAEKN N+ + P S RLYVGN+HFN
Sbjct: 233 QKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGN-----PNSVPFHRLYVGNIHFN 287
Query: 364 MTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAI 423
+TE L+ VFEPFG +E VQL D+ G +G+GFVQF AR AL ++ GR I
Sbjct: 288 VTEQDLQAVFEPFGELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPI 347
Query: 424 KVSAVTDQ-------------SGLQDL------------GANTTGD-------------- 444
+V D+ SG + G +T D
Sbjct: 348 RVGLGNDKFTPESTANLMHRFSGQNNFQGSAFSGAGGRGGQASTFDRAGGRDSDKAGGAS 407
Query: 445 -FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASA 503
DD + G++ N SR LM+KL R+ A+ V + A PLP
Sbjct: 408 ALDDTDVAGVNFNNYSRDALMRKLARTDEASNGREDQVVVKPKTEAKPLPV--------- 458
Query: 504 VSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEF 563
+ + S C++L NMFDP+ E +++
Sbjct: 459 -----------------------------------NVNMASRCVVLHNMFDPEEEEGDDW 483
Query: 564 DMDIKEDVEGECSK-FGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 622
++++D+ E + +G + HI V+ +S G VYL+F+ Q A + L+GR+F G+MI
Sbjct: 484 VKELEDDIRAEAERQYGHVVHIAVDPNSKGDVYLKFDKVQGGENAIKGLNGRYFGGRMIN 543
Query: 623 ATFMVPQTYEAKF 635
A+ +V Y + F
Sbjct: 544 ASPVVDAVYSSLF 556
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/436 (34%), Positives = 222/436 (50%), Gaps = 83/436 (19%)
Query: 208 RDRELKEREKERESRDNDKESRRPKEK-KEQVEPEVDPERDQRTVFAYQICLKADERDVY 266
R+ EL E++ + + S+R + + E+ V +
Sbjct: 161 RNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQ-------------------- 200
Query: 267 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA 326
DVRLI +RR KG+ YVEF D SV +A+ LSGQ LLG P++V+ ++A
Sbjct: 201 ----------DVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQA 250
Query: 327 EKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL 386
EKN + NS G TGP RLYVG+LHFN+TED LR +FEPFG ++ +QL +
Sbjct: 251 EKNRM-GNSMPNLMPKGQTGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIM 304
Query: 387 D-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGD 444
D ETG KG+GF+ F +DA+ AL LNG E+ GR +KV VT+++ L + + D
Sbjct: 305 DPETGRSKGYGFLTFRNADDAKKALEQLNG-FELAGRPMKVGNVTERTDL--IQGPSLLD 361
Query: 445 FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAV 504
D+ + G+ L A R LM KL T L +P A AA+A
Sbjct: 362 TDELDRSGIDLGATGRLQLMFKL-----------------AEGTGLEIPPA----AANA- 399
Query: 505 STLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFD 564
L A + T P + ++C +L NMFDP+NET +
Sbjct: 400 ------------------LNMAPVMSTPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWA 441
Query: 565 MDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITA 623
+I++DV EC+K G + H++V++ S G VY++ + +A AA +LHGRWFAG++ITA
Sbjct: 442 KEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 501
Query: 624 TFMVPQTYEAKFPDSI 639
++ Y + FPD++
Sbjct: 502 AYVPVVNYHSLFPDAM 517
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 203/433 (46%), Gaps = 91/433 (21%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFS-RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
ERD RTVF Q+ + + FF AG V + +++ DR S RSKGVGYVEF D +V
Sbjct: 169 ERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGVGYVEFKDEETV 228
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
A+ L+G+PL G P++VK +EAEKN N+ + P S RLYVGN+HFN
Sbjct: 229 QKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGN-----PNSVPFHRLYVGNIHFN 283
Query: 364 MTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAI 423
+TE L+ VFEPFG +E VQL D+ G +G+GFVQF AR AL ++ GR I
Sbjct: 284 VTEQDLQAVFEPFGELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPI 343
Query: 424 KVSAVTDQ-------------SGLQDL------------GANTTGD-------------- 444
+V D+ SG + G +T D
Sbjct: 344 RVGLGNDKFTPESTANLMHRFSGQNNFQGSAFSGAGGRGGQASTFDRAGGRDSDKAGGAS 403
Query: 445 -FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASA 503
DD + G++ N SR LM+KL R+ A+ V + A PLP
Sbjct: 404 ALDDTDVAGVNFNNYSRDALMRKLARTDEASNGREDQVVVKPKTEAKPLPV--------- 454
Query: 504 VSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEF 563
+ + S C++L NMFDP+ E +++
Sbjct: 455 -----------------------------------NVNMASRCVVLHNMFDPEEEEGDDW 479
Query: 564 DMDIKEDVEGECSK-FGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 622
++++D+ E + +G + HI V+ +S G VYL+F+ Q A + L+GR+F G+MI
Sbjct: 480 VKELEDDIRAEAERQYGHVVHIAVDPNSKGDVYLKFDKVQGGENAIKGLNGRYFGGRMIN 539
Query: 623 ATFMVPQTYEAKF 635
A+ +V Y + F
Sbjct: 540 ASPVVDAVYSSLF 552
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/409 (35%), Positives = 214/409 (52%), Gaps = 26/409 (6%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P+ + P + ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSK
Sbjct: 167 PRVRDGTPPPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 226
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN-LVQSNSSIAGASGGGTGPYS 349
GVGYVEF V A+ L+GQ LLG PV+V+ +EAEKN V++ S G P S
Sbjct: 227 GVGYVEFKSEEHVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTEST------GHHPNS 280
Query: 350 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNA 409
RLYVGN+HF++TE L+ VFEPFG +E VQL D+ G +G+GFVQ R N
Sbjct: 281 IPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQPERPSKKMNG 340
Query: 410 LNLNGQLEIVGRAI-KVSAVTDQSGLQDL-GANTTGDFDDDEGGGLSLNARSRALLMQKL 467
+L G+ VG K + + + LQ G N F +G S A R
Sbjct: 341 FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQF---QGSAFS-GAGGRGPATSNF 396
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLV----PPLVQGTVPTHPGQL 523
DR+G+ G+ + A++ T + + + L PP VP
Sbjct: 397 DRAGARDNEKGTGAS-ALDDTDVAGVNFNNYSRDALMRKLARTDEPP--ASVVPDR---- 449
Query: 524 GTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLK 582
L+ T + P+ + + S C++L NMFDP E E++ ++++DV E +K+G +
Sbjct: 450 -QILKPKTETKPLPVNVNMASRCVVLHNMFDPAEEEGEDWIKELEDDVREEAEAKYGHVV 508
Query: 583 HIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTY 631
HI ++ +SAG +YL+F+ Q A + L+GR+F G+MITA +V Y
Sbjct: 509 HISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITAAPVVDAVY 557
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 151/436 (34%), Positives = 222/436 (50%), Gaps = 83/436 (19%)
Query: 208 RDRELKEREKERESRDNDKESRRPKEK-KEQVEPEVDPERDQRTVFAYQICLKADERDVY 266
R+ EL E++ + + S+R + + E+ V +
Sbjct: 137 RNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQ-------------------- 176
Query: 267 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA 326
DVRLI +RR KG+ YVEF D SV +A+ LSGQ LLG P++V+ ++A
Sbjct: 177 ----------DVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQA 226
Query: 327 EKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL 386
EKN + NS G TGP RLYVG+LHFN+TED LR +FEPFG ++ +QL +
Sbjct: 227 EKNRM-GNSMPNLMPKGQTGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIM 280
Query: 387 D-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGD 444
D ETG KG+GF+ F +DA+ AL LNG E+ GR +KV VT+++ L + + D
Sbjct: 281 DPETGRSKGYGFLTFRNADDAKKALEQLNG-FELAGRPMKVGNVTERTDL--IQGPSLLD 337
Query: 445 FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAV 504
D+ + G+ L A R LM KL T L +P A AA+A
Sbjct: 338 TDELDRSGIDLGATGRLQLMFKL-----------------AEGTGLEIPPA----AANA- 375
Query: 505 STLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFD 564
L A + T P + ++C +L NMFDP+NET +
Sbjct: 376 ------------------LNMAPVMSTPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWA 417
Query: 565 MDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITA 623
+I++DV EC+K G + H++V++ S G VY++ + +A AA +LHGRWFAG++ITA
Sbjct: 418 KEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 477
Query: 624 TFMVPQTYEAKFPDSI 639
++ Y + FPD++
Sbjct: 478 AYVPVVNYHSLFPDAM 493
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 151/436 (34%), Positives = 222/436 (50%), Gaps = 83/436 (19%)
Query: 208 RDRELKEREKERESRDNDKESRRPKEK-KEQVEPEVDPERDQRTVFAYQICLKADERDVY 266
R+ EL E++ + + S+R + + E+ V +
Sbjct: 137 RNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQ-------------------- 176
Query: 267 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA 326
DVRLI +RR KG+ YVEF D SV +A+ LSGQ LLG P++V+ ++A
Sbjct: 177 ----------DVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQA 226
Query: 327 EKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL 386
EKN + NS G TGP RLYVG+LHFN+TED LR +FEPFG ++ +QL +
Sbjct: 227 EKNRM-GNSMPNLMPKGQTGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIM 280
Query: 387 D-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGD 444
D ETG KG+GF+ F +DA+ AL LNG E+ GR +KV VT+++ L + + D
Sbjct: 281 DPETGRSKGYGFLTFRNADDAKKALEQLNG-FELAGRPMKVGNVTERTDL--IQGPSLLD 337
Query: 445 FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAV 504
D+ + G+ L A R LM KL T L +P A AA+A
Sbjct: 338 TDELDRSGIDLGATGRLQLMFKL-----------------AEGTGLEIPPA----AANA- 375
Query: 505 STLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFD 564
L A + T P + ++C +L NMFDP+NET +
Sbjct: 376 ------------------LNMAPVMSTPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWA 417
Query: 565 MDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITA 623
+I++DV EC+K G + H++V++ S G VY++ + +A AA +LHGRWFAG++ITA
Sbjct: 418 KEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 477
Query: 624 TFMVPQTYEAKFPDSI 639
++ Y + FPD++
Sbjct: 478 AYVPVVNYHSLFPDAM 493
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 151/436 (34%), Positives = 222/436 (50%), Gaps = 83/436 (19%)
Query: 208 RDRELKEREKERESRDNDKESRRPKEK-KEQVEPEVDPERDQRTVFAYQICLKADERDVY 266
R+ EL E++ + + S+R + + E+ V +
Sbjct: 149 RNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQ-------------------- 188
Query: 267 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA 326
DVRLI +RR KG+ YVEF D SV +A+ LSGQ LLG P++V+ ++A
Sbjct: 189 ----------DVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQA 238
Query: 327 EKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL 386
EKN + NS G TGP RLYVG+LHFN+TED LR +FEPFG ++ +QL +
Sbjct: 239 EKNRM-GNSMPNLMPKGQTGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIM 292
Query: 387 D-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGD 444
D ETG KG+GF+ F +DA+ AL LNG E+ GR +KV VT+++ L + + D
Sbjct: 293 DPETGRSKGYGFLTFRNADDAKKALEQLNG-FELAGRPMKVGNVTERTDL--IQGPSLLD 349
Query: 445 FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAV 504
D+ + G+ L A R LM KL T L +P A AA+A
Sbjct: 350 TDELDRSGIDLGATGRLQLMFKL-----------------AEGTGLEIPPA----AANA- 387
Query: 505 STLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFD 564
L A + T P + ++C +L NMFDP+NET +
Sbjct: 388 ------------------LNMAPVMSTPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWA 429
Query: 565 MDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITA 623
+I++DV EC+K G + H++V++ S G VY++ + +A AA +LHGRWFAG++ITA
Sbjct: 430 KEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVNSLHGRWFAGRVITA 489
Query: 624 TFMVPQTYEAKFPDSI 639
++ Y + FPD++
Sbjct: 490 AYVPVVNYHSLFPDAM 505
>gi|344298613|ref|XP_003420986.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Loxodonta
africana]
Length = 434
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 212/404 (52%), Gaps = 47/404 (11%)
Query: 162 ERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERES 221
+R+R R+ RSR+R+ R RS D + RS DR +R R R L + S
Sbjct: 69 DRHR-QRNSLSRSRERQHRHRSRSWDHQRSSESRSWDRRREDRVRYRSPPLATGRRYGHS 127
Query: 222 RDNDKESRRP-KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL 280
+ + P +E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+
Sbjct: 128 KSPHFREKSPVREPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRI 184
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGA 340
I DRNSRRSKG+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + A
Sbjct: 185 ISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQWLLGVPIIVQASQAEKNRL-------AA 237
Query: 341 SGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQ 399
SGG RLYVG+LHFN+TED LR +FEPFG ++ + L D +TGH KG+GF+
Sbjct: 238 MANNLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFIT 297
Query: 400 FARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSL 455
F+ E AR AL LNG E+ GR ++V T++ D G + T GD + D G
Sbjct: 298 FSDSECARRALEQLNG-FELAGRPMRVGHATERP---DGGTDITFPDGDRELDLG----- 348
Query: 456 NARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ-- 513
+A R LM KL + + LPT AA+A + +Q
Sbjct: 349 SAGGRLQLMAKL-----------------AEGSGIQLPTTAAAAAAAAAAAAAAAALQLN 391
Query: 514 GTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
G VP G L A + + V S+CL L ++F PK
Sbjct: 392 GAVPL--GALNPAALTALSPALNLASQAVASQCLQLSSLFTPKT 433
>gi|344298615|ref|XP_003420987.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Loxodonta
africana]
Length = 450
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 212/404 (52%), Gaps = 47/404 (11%)
Query: 162 ERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERES 221
+R+R R+ RSR+R+ R RS D + RS DR +R R R L + S
Sbjct: 85 DRHR-QRNSLSRSRERQHRHRSRSWDHQRSSESRSWDRRREDRVRYRSPPLATGRRYGHS 143
Query: 222 RDNDKESRRP-KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL 280
+ + P +E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+
Sbjct: 144 KSPHFREKSPVREPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRI 200
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGA 340
I DRNSRRSKG+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + A
Sbjct: 201 ISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQWLLGVPIIVQASQAEKNRL-------AA 253
Query: 341 SGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQ 399
SGG RLYVG+LHFN+TED LR +FEPFG ++ + L D +TGH KG+GF+
Sbjct: 254 MANNLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFIT 313
Query: 400 FARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSL 455
F+ E AR AL LNG E+ GR ++V T++ D G + T GD + D G
Sbjct: 314 FSDSECARRALEQLNG-FELAGRPMRVGHATERP---DGGTDITFPDGDRELDLG----- 364
Query: 456 NARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ-- 513
+A R LM KL + + LPT AA+A + +Q
Sbjct: 365 SAGGRLQLMAKL-----------------AEGSGIQLPTTAAAAAAAAAAAAAAAALQLN 407
Query: 514 GTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
G VP G L A + + V S+CL L ++F PK
Sbjct: 408 GAVPL--GALNPAALTALSPALNLASQAVASQCLQLSSLFTPKT 449
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 212/413 (51%), Gaps = 33/413 (7%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + R++ EFF + G V + +++ DR S RSKGVGYVEF SV
Sbjct: 179 ERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKGEESVA 238
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
A+ L+GQ LLG PV+V+P+EAEKN NS +G P S RLYVGN+HF++
Sbjct: 239 AALQLTGQKLLGIPVIVQPTEAEKNRQVRNSESSGH------PNSVPFHRLYVGNIHFSI 292
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TE L+ VFEPFG +E VQL D++G +G+GFVQF AR AL ++ GR I+
Sbjct: 293 TETDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIR 352
Query: 425 VSA----VTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSA 480
V T +S L + + G A R DR+G G+
Sbjct: 353 VGLGNDKFTPESTANLLRGFQGQNQNQQFQGSSFSGAGGRGPQASNFDRAGGRDNEKGTG 412
Query: 481 VTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTI 540
+ A++ T + A + + L+ L + PT+ L+ T + P+ +
Sbjct: 413 AS-ALDDTDV----AGVNFNNYSRDALMRKLARTDEPTNGQPERQILKPKTETKPLPVNV 467
Query: 541 GVPSECLLLKNMFDPKNETY-----------------EEFDMDIKEDVEGEC-SKFGKLK 582
+ S C++L+NMFDP + +++ +++++V E K+G +
Sbjct: 468 SMASRCVVLRNMFDPAEYVFYSPPSEAGSLTSARQVGDDWAKELEDEVRQEAEEKYGHVV 527
Query: 583 HIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
HI ++ +S G +YL+F+ A + L+GR+F G+MITA +V Y + F
Sbjct: 528 HISLDPNSQGDIYLKFDKVSGGENAIKGLNGRYFDGRMITAAPVVDAVYSSLF 580
>gi|344298617|ref|XP_003420988.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Loxodonta
africana]
Length = 416
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 202/385 (52%), Gaps = 44/385 (11%)
Query: 182 RERSRDREVIERERSRDREVIERERSRD--RELKEREKERESRDNDKESRRPKEKKEQVE 239
R+R R R+ RSR+R+ R RS D R + R +R D + P E V+
Sbjct: 66 RDRDRHRQRNSLSRSRERQHRHRSRSWDHQRSSESRSWDRRREDRVRYRSPPLATGEPVD 125
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF +
Sbjct: 126 NLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCE 185
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
+ SVP+AI L+GQ LLG P++V+ S+AEKN + A SGG RLYVG+
Sbjct: 186 IQSVPLAIGLTGQWLLGVPIIVQASQAEKNRL-------AAMANNLQKGSGGPMRLYVGS 238
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLE 417
LHFN+TED LR +FEPFG ++ + L D +TGH KG+GF+ F+ E AR AL LNG E
Sbjct: 239 LHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNG-FE 297
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRSGSAT 474
+ GR ++V T++ D G + T GD + D G +A R LM KL
Sbjct: 298 LAGRPMRVGHATERP---DGGTDITFPDGDRELDLG-----SAGGRLQLMAKL------- 342
Query: 475 TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQ--GTVPTHPGQLGTALQVPTA 532
+ + LPT AA+A + +Q G VP G L A +
Sbjct: 343 ----------AEGSGIQLPTTAAAAAAAAAAAAAAAALQLNGAVPL--GALNPAALTALS 390
Query: 533 SVPIFDTIGVPSECLLLKNMFDPKN 557
+ V S+CL L ++F PK
Sbjct: 391 PALNLASQAVASQCLQLSSLFTPKT 415
>gi|148231281|ref|NP_001085808.1| RNA binding motif protein 23 [Xenopus laevis]
gi|49118375|gb|AAH73374.1| MGC80803 protein [Xenopus laevis]
Length = 416
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/294 (43%), Positives = 171/294 (58%), Gaps = 27/294 (9%)
Query: 225 DKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
+K+ P+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDV++I DR
Sbjct: 132 NKQKTPPREPEAILSPE---ERDARTVFCMQLAARIRSRDLEDFFSAVGKVRDVKIISDR 188
Query: 285 NSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG 344
NSRRSKG+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + + S+ G
Sbjct: 189 NSRRSKGIAYVEFCEIHSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMSN--NLQRGN 246
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
GP RLYVG+LHFN+TE+ LR +FEPFG +E +QL + +TG KGFGF+ F
Sbjct: 247 FGPM-----RLYVGSLHFNITEEMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDA 301
Query: 404 EDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRAL 462
E AR AL LNG E+ G+ +KV VT G + D D+ E G+ L A R
Sbjct: 302 ECARRALEQLNG-FELAGKPMKVGHVTGG------GDASFLDSDELERNGIGLGATGRLQ 354
Query: 463 LMQKLDRSGSATTIAGSAVTPAVNSTALPLPTA-PLLGAASAVSTLVPPLVQGT 515
LM KL + G+ I P AL L A PL A++ L P L T
Sbjct: 355 LMAKLAQ-GTGLQI------PLAAQAALQLNGAFPLTALNPALTALTPALNLAT 401
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 211/438 (48%), Gaps = 90/438 (20%)
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
P + ERD+RTVF Q+ + +++ EFF + G V + +++ DR S RSKGVGYVEF +
Sbjct: 170 PLTEDERDRRTVFVQQLAARLRTKELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKN 229
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
SV A+ L+GQ LLG PV+V+ +EAEKN + G P S RLYVGN
Sbjct: 230 EDSVQAALQLTGQKLLGIPVIVQLTEAEKN-----RQVRNPDATGNHPNSIPFHRLYVGN 284
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
+HF++TE L+ VFEPFG +E VQL D+TG +G+GFVQF AR AL ++
Sbjct: 285 IHFSITEQDLQNVFEPFGELEFVQLQKDDTGRSRGYGFVQFRDATQAREALEKMNGFDLA 344
Query: 420 GRAIKVSAVTDQ-------------------------SGLQDLGANTTG----------- 443
GR I+V D+ SG G T+
Sbjct: 345 GRPIRVGLGNDKFTPESTANLLQRFQGQNQQFQGSSFSGAGGRGPPTSNFDRAGARDNEK 404
Query: 444 -----DFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLL 498
DD + G++ N SR LM+KL R+ + P+ A P
Sbjct: 405 GTGASALDDTDVAGVNFNNYSRDALMRKLARTDEPIS------APSDRQVAKP------- 451
Query: 499 GAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNE 558
T + P ++PI + + S C++L+NMFDP +
Sbjct: 452 ------KTEIKP----------------------NLPI--NVNMASRCVVLRNMFDPAEQ 481
Query: 559 TYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFA 617
E++ +++E+V E K+G + HI ++ +S G +YL+F+ Q A + L+GR+F
Sbjct: 482 EGEDWAKELEEEVRQEAEEKYGHVVHISLDPNSPGDIYLKFDKVQGGENAIKGLNGRYFD 541
Query: 618 GKMITATFMVPQTYEAKF 635
G+MITA +V Y + F
Sbjct: 542 GRMITAAPVVDAVYSSLF 559
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 164/277 (59%), Gaps = 22/277 (7%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVST 506
G + PA AL + + GA + + T
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQT 395
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 164/277 (59%), Gaps = 22/277 (7%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 309 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 365
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVST 506
G + PA AL + + GA + + T
Sbjct: 366 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQT 395
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 217/465 (46%), Gaps = 122/465 (26%)
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFS---RAGKVRDVRLIMDRNSRRSKGVGYVE 296
PE+D + ++R+VF Q+ + +RD+ EFF G V+DVR++MDR +RRSKGVGYVE
Sbjct: 266 PEID-DYEERSVFCAQLSARLSQRDLGEFFEDHLGEGAVQDVRIVMDRLTRRSKGVGYVE 324
Query: 297 FYDVMSVPMAIALSGQPLLGQPVM------------------------VKPSEAEKNL-- 330
F VP AI LSG+ L G P++ + P A L
Sbjct: 325 FAARELVPKAIELSGKDLFGIPIIVQRTDAPRNGPAYAGPGDASARNGLTPHPAVPQLDP 384
Query: 331 -VQSNSSI------AGA------------SGGGTGP-YSGGARRLYVGNLHFNMTEDQLR 370
V +N+ + AGA GP RLYVG+LHF++T++ ++
Sbjct: 385 RVLANAPLPMQYHTAGAPIHMNVAPPQAPRAPRPGPNMPNTEARLYVGSLHFSLTDENVK 444
Query: 371 QVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV- 428
VFEPFG +E V L + TG KGF F+QF EDA+ AL E+ GRAI+V V
Sbjct: 445 AVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHAEDAKKALEQMNGFELAGRAIRVGNVN 504
Query: 429 ---TDQSGLQDLGA-----------NTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSAT 474
T +G G+ T FDD GGG LN RA LM+KL R+
Sbjct: 505 AKGTGSAGSYSNGSCPGSEGGGHLPQLTSAFDD--GGGAGLNPERRAALMEKLARNND-- 560
Query: 475 TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASV 534
P PT +S ++Q + P
Sbjct: 561 ----------------PSPT---------ISEATSAMIQ--------------ERPA--- 578
Query: 535 PIFDTIGVP---SECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDS 590
G+P S LLLKNMF+P ET + +D D+ EDV+ EC +K+G + I VEKDS
Sbjct: 579 ------GIPESTSTSLLLKNMFNPAEETEQGWDKDLAEDVKDECHAKYGAVTSIHVEKDS 632
Query: 591 AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
AG VY+ F N + A L+GR+F GK I+A ++ +AK
Sbjct: 633 AGEVYVTFANLDGSRKALEGLNGRFFGGKPISAQYIPDAFVQAKL 677
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 151/238 (63%), Gaps = 15/238 (6%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 122 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 178
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 179 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 231
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 232 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 291
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL 467
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 292 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARL 346
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 209/447 (46%), Gaps = 105/447 (23%)
Query: 240 PEVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
PE+D E RD+RTVF Q+ + + FF ++G V + +++ DR S RSKGVGYVEF
Sbjct: 202 PELDQEERDKRTVFVQQLAAALRTKQLKAFFEQSGPVVEAQIVKDRVSGRSKGVGYVEFA 261
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
D SV A+ L+GQ L+ P++V+ +EAEKN Q+ +S + P+ RLYVG
Sbjct: 262 DEESVQKALELTGQKLMNIPIIVQLTEAEKNR-QARTSEGQPTQSNGIPF----HRLYVG 316
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
N+HF++ E LR VFEPFG +E VQL ++TG KG+GFVQFA+ ++A+ AL E+
Sbjct: 317 NIHFSIEESDLRDVFEPFGELEFVQLQKEDTGRSKGYGFVQFAKSDEAKIALEKMNGFEV 376
Query: 419 VGRAIKVSAVTDQ-------SGLQDLG--------------------------------- 438
GR I+V +D+ + LQ G
Sbjct: 377 AGRPIRVGLGSDKFTPETTSALLQRFGSQAHHAQMQGSSFSGAGGRGAHAGGQNNFDRST 436
Query: 439 -------ANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALP 491
+ +G DD + GG++ N SR LM KL R+ + + V ALP
Sbjct: 437 NAREHDKSGASGALDDTDVGGVAFNNYSRHALMSKLARTDEPQPVVETKV-------ALP 489
Query: 492 LPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKN 551
Q V P PS C+L+KN
Sbjct: 490 ---------------------QRVVVDEPN---------------------PSRCVLIKN 507
Query: 552 MFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGF-VYLRFENTQSAFAAQR 609
+++ ET EE D+K D+ EC K+G + H+ S G VY++F A +
Sbjct: 508 VYNHSKET-EESLADLKVDMREECDKKYGSVVHLDTASGSTGGEVYVKFAAKDGGIKAVQ 566
Query: 610 ALHGRWFAGKMITATFMVPQTYEAKFP 636
L+GR+F G+ +TA+++ Y +P
Sbjct: 567 GLNGRFFGGRRLTASYVADAFYHTMWP 593
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 151/238 (63%), Gaps = 15/238 (6%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 19 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 75
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+AEKN A A S G
Sbjct: 76 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR-------AAAMANNLQKGSAG 128
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 129 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 188
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL 467
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 189 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARL 243
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 220/430 (51%), Gaps = 34/430 (7%)
Query: 224 NDKESRRPKEKKEQVEPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIM 282
N E R + EPE+ + +RD+RT+F QI +A+ R + FF R G V + +++
Sbjct: 152 NGDERRNSRRNNTPPEPEITEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVK 211
Query: 283 DRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASG 342
DR + RSKGVGYVEF D SVP A+ L+GQ L G P++ + +EAEKN A S
Sbjct: 212 DRVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRA------ARPSE 265
Query: 343 GGTGPYSGGA--RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDET--GHCKGFGFV 398
GGT P + GA RLYVGN+HF++TE L+++FEPFG +E V L DE G KG+GFV
Sbjct: 266 GGTAPGANGAPFHRLYVGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFV 325
Query: 399 QFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDD----EGGGLS 454
QF A+NAL E+ GR I+V D+ + AN F +G S
Sbjct: 326 QFVDPSHAKNALAEMNGFELAGRQIRVGLGNDKFTPEST-ANLLRTFSQQAQSYQGSAFS 384
Query: 455 LNARSRALLMQK---LDRSGSAT--TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVP 509
A DR+ S ++G++ + + T S L+
Sbjct: 385 GAGGRGAYAGGSGGVFDRTHSKDDRGVSGASALDDTDVAGVNFKTYDR-------SKLMD 437
Query: 510 PLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFD---MD 566
L + P P + G V VP+ D + S+C+ ++N FDP E D D
Sbjct: 438 ALARRDNP-EPTKQGAQPVVSKPRVPVVDK-PMASKCIKIENAFDPDEEQRNWGDNWVKD 495
Query: 567 IKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATF 625
++ +V+ EC K+GK+ HI V+ +S G ++++F++ A + L+GR F + I A++
Sbjct: 496 LELEVKSECDKKYGKVVHIAVDTNSEGEIFVKFDSVSGGEKALQGLNGRNFNHRTIRASY 555
Query: 626 MVPQTYEAKF 635
+V + Y + +
Sbjct: 556 VVDKIYNSLW 565
>gi|323507689|emb|CBQ67560.1| related to RNA-binding region containing protein 2 [Sporisorium
reilianum SRZ2]
Length = 659
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 157/467 (33%), Positives = 218/467 (46%), Gaps = 126/467 (26%)
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYVE 296
PE+D + ++R+VF Q+ + +RD+ EFF G V+DVR++MDR +RRSKGVGYVE
Sbjct: 247 PEID-DYEERSVFCSQLSARLGQRDLGEFFEDHLGEGAVQDVRIVMDRVTRRSKGVGYVE 305
Query: 297 FYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN-LVQSNSSIAGASGGGT---------- 345
F VP AI L+G L G P++V+ ++A N V S AGA G
Sbjct: 306 FAARELVPKAIELTGTILFGIPIVVQRTDAAHNGGVYQGSGDAGARHGSAPHPAVAAPQL 365
Query: 346 ------------------GPYSGGA------------------RRLYVGNLHFNMTEDQL 369
P GA RLYVG+LHF++T++ +
Sbjct: 366 DPRVLANAPLPMQYHTAGAPIHLGAAPQAPRAPRPGPNMPNTEARLYVGSLHFSLTDENV 425
Query: 370 RQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 428
+ VFEPFG +E V L + TG KGF F+QF EDA+ AL + RAI+V V
Sbjct: 426 KAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKYPEDAKKALEQMNGFVLAERAIRVGNV 485
Query: 429 T----------------DQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGS 472
D G L T FDD GGG LN RA LM+KL R+
Sbjct: 486 NAKGSGGGSSYSSGSGQDSQGDGHL-PQLTSAFDD--GGGAGLNPERRAALMEKLARNNE 542
Query: 473 ATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTA 532
P+A +AS V+T+ A + P
Sbjct: 543 --------------------PSA----SASEVTTV------------------AQERPA- 559
Query: 533 SVPIFDTIGVP---SECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEK 588
G+P S LLLKNMF+P ET ++D D+ EDV+ EC +K+G++ I VEK
Sbjct: 560 --------GIPESTSTSLLLKNMFNPAEETEPDWDTDLAEDVKEECQAKYGRVTSIHVEK 611
Query: 589 DSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+SAG +Y+ F + ++ A L+GR+F GK I+A ++ +AK
Sbjct: 612 ESAGEIYVTFADLDASRKALDGLNGRFFGGKPISAQYIPDAFVQAKL 658
>gi|348674007|gb|EGZ13826.1| hypothetical protein PHYSODRAFT_249442 [Phytophthora sojae]
Length = 413
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 207/424 (48%), Gaps = 59/424 (13%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
RD RTVF Q+ K E+D+ F S+ GKV +V LI D+ + RSKG YVE ++ VP
Sbjct: 5 RDHRTVFVGQLTQKVREKDLERFLSKTGKVENVLLIRDKFTNRSKGFAYVELSNLEDVPK 64
Query: 306 AIALSGQPLLGQ--PVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA----------- 352
+ L+GQ Q P+M+K SEAEKN S+ A+ T P + A
Sbjct: 65 VLLLNGQVPDFQVFPIMIKASEAEKNFAAKKDSVMNAAAS-TAPLTADAPGMSASALSAA 123
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNL 412
R+Y GNLH N+TED LR VF+ FG V V + DE G KGF F+QF+ ++A AL+
Sbjct: 124 SRIYCGNLHTNITEDDLRIVFQSFGEVLSVTINRDEMGRSKGFSFIQFSSPQEANFALSK 183
Query: 413 NGQLEIVGRAIKVSAVTDQS--------------GLQDLGANTTGDFDDDEGGGLSLNAR 458
LE+ G +++ V + + G + + +DDEG GLS+NA+
Sbjct: 184 GNGLELAGNYLRLGPVNENAMNGGNRGMAGAGGSGADNGASGGRWKLEDDEGTGLSMNAQ 243
Query: 459 SRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPT 518
SR+ LM KL AG+ V PT A++ T
Sbjct: 244 SRSALMAKL---------AGNDVNL--------FPTRYPAAASTTDYTNTMAATAAQRAE 286
Query: 519 HPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYE---EFDMDIKEDVEGEC 575
L ++ ++ G S C ++KNMFD E E+ ++I++DVE EC
Sbjct: 287 QAAALMSSTEIE----------GSESFCFVVKNMFDVYQEQKSGNPEWAVEIQQDVEEEC 336
Query: 576 SKFGKLKHIFVEKD-SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
++G + H +VE + G VY+ F N +A +A + LHGRWF + I+ ++ Q Y
Sbjct: 337 GQYGPVLHTYVENEKQGGLVYVLFANVSAAVSAAKKLHGRWFNKRQISVRYLSSQEYVGM 396
Query: 635 FPDS 638
FP +
Sbjct: 397 FPQA 400
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 214/429 (49%), Gaps = 72/429 (16%)
Query: 243 DPERDQRTVFAYQICLKADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGVGYVEFYDVM 301
+ +RD TV + LKADERD+YEFFS AGKVRD++ I D+ S +SKGV YVEFY
Sbjct: 619 EAKRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQD 678
Query: 302 SVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG--ARRLYVGN 359
SV A++ +G L +P+ ++ S+AEKN A P +LY+G
Sbjct: 679 SVVKALSANGYMLKNRPIKIQSSQAEKNRA--------AKAAKHQPIDPNDIPIKLYIGG 730
Query: 360 L---HFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQ 415
L N+TE +L+Q+F PFG + V++ D TG CKGFGF+QF R +A A+ +
Sbjct: 731 LVGPLGNITEVELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNG 790
Query: 416 LEIVGRAIKVSAVTDQSGL-------------QDLGANTTGDFDDDE------------G 450
+EI GR +KVS D + Q L + +E G
Sbjct: 791 MEIAGRELKVSFAQDSKYILASEKEAKEKILAQLLAKKAKAEEKVEEPDNEKIDNDDDDG 850
Query: 451 GGLSLNARSRALLMQKLDRSGSATTIAGSAVTP--AVNSTALPLPTAPLLGAASAVSTLV 508
GGL A S+ LMQKL R T+ S ++ A + A+ + APL A S
Sbjct: 851 GGLIAGAGSKIALMQKLQRD----TVLDSGISSQFATGANAI-MHAAPLAAAQSNAIMHG 905
Query: 509 PPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETY---EEFDM 565
PL A P+A I P+ L+L NMF P +E+ +F
Sbjct: 906 APL--------------AAAQPSALNNI-----TPN--LVLCNMFSPNDESIGSDPDFFT 944
Query: 566 DIKEDVEGECSKFGKLKHIFVE-KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITAT 624
DI EDV+ ECSK+G + I+++ K+ G +Y+++ + A + L+GR+F G +I+A
Sbjct: 945 DIIEDVKEECSKYGSIAKIWLDSKNIDGKIYIKYATPDESLKAFQFLNGRYFGGSLISAY 1004
Query: 625 FMVPQTYEA 633
F+ + +++
Sbjct: 1005 FITAEVWDS 1013
>gi|351697087|gb|EHB00006.1| Putative RNA-binding protein 23 [Heterocephalus glaber]
Length = 436
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 204/377 (54%), Gaps = 46/377 (12%)
Query: 143 REKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVI 202
R++D+ ER RSG + +R S +S DR RS+D + R +
Sbjct: 79 RDRDRHCERRSGSRSGDRQQRPCS------QSWDRPHSSESRSQDWRREDYVPYRRLPLA 132
Query: 203 ERER---SRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLK 259
R S+ +ER RE DN + PE ERD RTVF Q+ +
Sbjct: 133 TGWRYGPSKSPHFRERSPVREPVDN-------------LSPE---ERDARTVFCMQLAAR 176
Query: 260 ADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPV 319
RD+ +FFS GKV DVR+I DRNSRRSKG+ YVEF D+ SVP+AI L+GQ LLG P+
Sbjct: 177 IRPRDLEDFFSAIGKVHDVRIISDRNSRRSKGIAYVEFCDIQSVPLAIGLTGQRLLGVPI 236
Query: 320 MVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTV 379
+V+ S+AEKN + +++A G SGG +RLYVG LHFN+TED LR +FEPFG +
Sbjct: 237 VVQASQAEKNRL---AAMANNLQKG----SGGPKRLYVGCLHFNITEDMLRGIFEPFGKI 289
Query: 380 ELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDL 437
E + L D ETGH KG+GF+ F+ E AR A+ LNG E+ GR ++V +T+++ D
Sbjct: 290 ENIVLMKDSETGHSKGYGFITFSESECARRAVEQLNG-FELAGRPMRVGHLTERA---DG 345
Query: 438 GANTT---GDFDDD---EGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTP--AVNSTA 489
G + T GD D GG L L A+ + + + A + + V P A+N A
Sbjct: 346 GTDITFPDGDQVVDLGSAGGHLQLMAKGSGIHLPITAAAAQAAALQLNGVVPLSALNPAA 405
Query: 490 LPLPTAPLLGAASAVST 506
L + L + AV++
Sbjct: 406 LTALSPALKLTSQAVAS 422
>gi|402875680|ref|XP_003901625.1| PREDICTED: probable RNA-binding protein 23 [Papio anubis]
Length = 497
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 202/371 (54%), Gaps = 51/371 (13%)
Query: 195 RSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKKEQVEPEVDPERDQRTVFA 253
RSRDR +R R L + S+ + P +E + + PE ERD RTVF
Sbjct: 169 RSRDRRHEDRVSYRSPPLAAGYRYGHSKSPHFREKSPVREPVDNLSPE---ERDARTVFC 225
Query: 254 YQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQP 313
Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF ++ SVP+AI L+GQ
Sbjct: 226 MQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQR 285
Query: 314 LLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVF 373
LLG P++V+ S+AEKN + +++A G SGG RLYVG+LHFN+TED LR +F
Sbjct: 286 LLGVPIIVQASQAEKNRL---AAMANNLQKG----SGGPMRLYVGSLHFNITEDMLRGIF 338
Query: 374 EPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQ 431
EPFG ++ + L D +TGH KG+GF+ F+ E AR AL LNG E+ GR ++V VT++
Sbjct: 339 EPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTER 397
Query: 432 SGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNST 488
D G + T GD + D G +A R LM KL +
Sbjct: 398 ---LDGGTDITFPDGDQELDPG-----SAGGRLQLMAKL-----------------AEGS 432
Query: 489 ALPLPTAPLLGAASAVSTLVPPLVQ--GTVPTHPGQLGTALQVPTASVPIFDTIGVPSEC 546
+ LPT AA+A + +Q G VP LG AL P A + + + S+C
Sbjct: 433 GIQLPTTAAAAAAAAAAAAHAAALQLNGAVP-----LG-ALN-PAALTALSPALNLASQC 485
Query: 547 LLLKNMFDPKN 557
L ++F P+
Sbjct: 486 FQLSSLFTPQT 496
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 198/407 (48%), Gaps = 60/407 (14%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + R++ EFF +AG V + +++ DR S RSKGVGYVEF SV
Sbjct: 226 ERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKSEESVA 285
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
A+ L+GQ LLG P++V+P+EAEKN +S G P S RLYVGN+HF++
Sbjct: 286 AALQLTGQKLLGIPIIVQPTEAEKNRQARTTS-------GHHPNSVPFHRLYVGNIHFSI 338
Query: 365 TEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
TE L+ VFEPFG +E VQL DE G +G+GFVQF +AR AL ++ GR I+
Sbjct: 339 TETDLQHVFEPFGELEFVQLQKDENGRSRGYGFVQFRDAANAREALEKMNGFDLAGRPIR 398
Query: 425 VSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPA 484
V D+ S A L++ GSA + AG PA
Sbjct: 399 VGLGNDK-----------------------FTPESTANLLRGFPGQGSAFSGAGGRGPPA 435
Query: 485 VNSTALPLPTAPLLGAASAV---------------STLVPPLVQGTVPTHPGQLGTALQV 529
+ + ASA+ L+ L + P Q+ V
Sbjct: 436 STFDRAGGRDSDKVSGASALDDTDVAGVNFNNYSRDALMRKLARTDEPAPERQILKPKTV 495
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEK 588
T +P+ N+ + E++ +++++V E K+G + HI V+
Sbjct: 496 ETKPLPV--------------NVNMASRQQGEDWIKELEDEVRQEAEEKYGHVVHIAVDP 541
Query: 589 DSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
+S G +YL+F+ Q A + L+GR+F G+MITA +V Y + F
Sbjct: 542 NSNGDIYLKFDKVQGGENAIKGLNGRYFDGRMITAAPVVDAVYSSLF 588
>gi|261858408|dbj|BAI45726.1| RNA binding motif protein 23 [synthetic construct]
Length = 406
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 192/366 (52%), Gaps = 47/366 (12%)
Query: 199 REVIERERSRDRELKEREKERESRDNDKESRR--PKEKKEQVEPEVDPERDQRTVFAYQI 256
R+ R RS DR + R+ R D+ R P E V+ ERD RTVF Q+
Sbjct: 80 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGEPVDNLSPEERDARTVFCMQL 139
Query: 257 CLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLG 316
+ RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF ++ SVP+AI L+GQ LLG
Sbjct: 140 AARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLG 199
Query: 317 QPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPF 376
P++V+ S+AEKN + A +GG RLYVG+LHFN+TED LR +FEPF
Sbjct: 200 VPIIVQASQAEKNRL-------AAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPF 252
Query: 377 GTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGL 434
G ++ + L D +TG KG+GF+ F+ E AR AL LNG E+ GR ++V VT++
Sbjct: 253 GKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTER--- 308
Query: 435 QDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALP 491
D G + T GD + D G +A R LM KL +
Sbjct: 309 LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL-----------------AEGAGIQ 346
Query: 492 LPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKN 551
LP+ AA+A + + G VP G L P A + + + S+CL L +
Sbjct: 347 LPSTAAAAAAAAAAQAAALQLNGAVPL--GALN-----PAALTALSPALNLASQCLQLSS 399
Query: 552 MFDPKN 557
+F P+
Sbjct: 400 LFTPQT 405
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 194/392 (49%), Gaps = 99/392 (25%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
E + R+VF Q+ + +R++ +FF +AGKVRD R+I DR SRRSKGVGYVEF ++ SV
Sbjct: 302 EHEMRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKGVGYVEFRELDSV 361
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNL-----VQSNSSIAG----------------ASG 342
A+AL+G LLG PVMV+ +EAEKN Q N+ AG
Sbjct: 362 QKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNNVAAGLVTVAPPPPVQRSYVAPKP 421
Query: 343 GGTGPYSGGA-RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQF 400
G GP + RLYVG+L+FN+T+D LRQVF+PFG +E V L D+ TG KG+ FVQF
Sbjct: 422 RGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQF 481
Query: 401 ARLEDARNALNLNGQLEIVGRAIKV---------------SAVTDQSGLQDLGAN----T 441
+ DA+NA+ ++ GRA++V V + + G N
Sbjct: 482 KNMHDAKNAMEKMNGFQLAGRALRVEIKAQPPAALLNATAPGVINPVIVTPTGGNFAMTN 541
Query: 442 TGDFDD--DEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLG 499
+ F++ +E G +N SR LM KL R+ T +
Sbjct: 542 SNSFEERLEEPVGSGMNQISRVELMHKLARTEQPTNV----------------------- 578
Query: 500 AASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNET 559
V+ + P +PTA+ S +LLKNMF+P+ ET
Sbjct: 579 ---PVTDMFRP-----------------NIPTAT----------SRSVLLKNMFNPEEET 608
Query: 560 YEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDS 590
+DM++++DV+GEC K+G + I +E +S
Sbjct: 609 ERGWDMELRDDVKGECEEKYGPVLAIAIETES 640
>gi|12803481|gb|AAH02566.1| RNA binding motif protein 23 [Homo sapiens]
gi|189055004|dbj|BAG37988.1| unnamed protein product [Homo sapiens]
gi|312151810|gb|ADQ32417.1| RNA binding motif protein 23 [synthetic construct]
Length = 424
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 203/387 (52%), Gaps = 49/387 (12%)
Query: 177 REVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKK 235
R+ R RS DR RSRD +R R L + S+ + P +E
Sbjct: 80 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPV 139
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
+ + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YV
Sbjct: 140 DNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYV 196
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG RL
Sbjct: 197 EFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGGPMRL 249
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLN 413
YVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL LN
Sbjct: 250 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 309
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRS 470
G E+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 310 G-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL--- 357
Query: 471 GSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVP 530
+ LP+ AA+A + + G VP G L P
Sbjct: 358 --------------AEGAGIQLPSTAAAAAAAAAAQAAALQLNGAVPL--GALN-----P 396
Query: 531 TASVPIFDTIGVPSECLLLKNMFDPKN 557
A + + + S+C L ++F P+
Sbjct: 397 AALTALSPALNLASQCFQLSSLFTPQT 423
>gi|403359392|gb|EJY79355.1| Splicing factor, putative [Oxytricha trifallax]
Length = 508
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 226/477 (47%), Gaps = 105/477 (22%)
Query: 203 ERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDP------------------ 244
ER ++RDR KE D++ + P EPE+DP
Sbjct: 88 ERRKNRDRNGKE---------GDRDGKEPN-----AEPEIDPVKKQEEALLKQIEEAKRQ 133
Query: 245 ----ERDQRTVFAYQICLKADERDVYEFFSR---AGKVRDVRLIMDRNSRRSKGVGYVEF 297
+RD TV +I L A+ERD+Y FFS+ GK+RDVRLI D+ S +SKG+ YVEF
Sbjct: 134 AEESQRDDCTVLVNRIALHANERDMYNFFSKEKGVGKIRDVRLIRDQRSGKSKGIAYVEF 193
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS---GGGTGPYSGGARR 354
Y SV +A+ALSG +GQ +M++ S+AEKN + S G P ++
Sbjct: 194 YTPESVLLAMALSGTQFMGQTIMIQASQAEKNRAAAASKYKKEQDRFGNLGNPKPQPQKK 253
Query: 355 ------LYVGNLH--FNMTEDQ-LRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLE 404
++VG L N +Q +R F PFG +E ++LP D TG KG + + + +
Sbjct: 254 VDLENQVFVGGLIDVLNQVNEQDIRGWFTPFGDIETIELPKDHITGRNKGHAIITYRKHK 313
Query: 405 DARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFD--DDEGGGLSLNARSRAL 462
AR A+ +I GR +KV +T+ + + + GD+D DD +A+SRAL
Sbjct: 314 YARTAVKEMNGFDINGRKLKVQIMTEANS-KLMNQRGAGDYDLEDDSANQYIHSAQSRAL 372
Query: 463 LMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQ 522
LMQKL R + S + N+ A AV Q
Sbjct: 373 LMQKLSRESNKQDSGQSIMAQNYNNHA-------------AVQ----------------Q 403
Query: 523 LGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEE---FDMDIKEDVEGECSKFG 579
A+ PS C+LL NMFDP ++ + +D+KE VE CS+FG
Sbjct: 404 YAQAM---------------PSNCVLLNNMFDPTGVDLKKDPAYFIDVKEQVEDVCSEFG 448
Query: 580 KLKHIFVEKDSAGFVYLRF--ENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
K++ ++VE+ +AG +++F + Q A +Q L+ R+F G++ITA F+ + K
Sbjct: 449 KVEKVWVEQ-AAGNCWVKFNKNDIQGAQRSQMTLNQRYFDGRLITANFVPENVFYGK 504
>gi|10880789|gb|AAG24388.1|AF275678_1 PP239 protein [Homo sapiens]
Length = 418
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 203/387 (52%), Gaps = 53/387 (13%)
Query: 179 VIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKKEQ 237
V+ R RS DR RSRD +R R L + S+ + P +E +
Sbjct: 76 VVTRSRSWDRRHGSESRSRDHRREDRVHYRSPPLTTGYRYGHSKSPHFREKSPVREPVDN 135
Query: 238 VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
+ PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF
Sbjct: 136 LSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 192
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN--LVQSNSSIAGASGGGTGPYSGGARRL 355
++ SVP+AI L+GQ LLG P++V+ S+AEKN +N+ G +GG RL
Sbjct: 193 CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKG---------NGGPMRL 243
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLN 413
YVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL LN
Sbjct: 244 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 303
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRS 470
G E+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 304 G-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL--- 351
Query: 471 GSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVP 530
+ LP+ AA+A + + G VP LG AL P
Sbjct: 352 --------------AEGAGIQLPSTAAAAAAAAAAQAAALQLNGAVP-----LG-ALN-P 390
Query: 531 TASVPIFDTIGVPSECLLLKNMFDPKN 557
A + + + S+C L ++F P+
Sbjct: 391 AALTALSPALNLASQCFQLSSLFTPQT 417
>gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 195/366 (53%), Gaps = 47/366 (12%)
Query: 199 REVIERERSRDRELKEREKERESRDNDKESRR--PKEKKEQVEPEVDPERDQRTVFAYQI 256
R+ R RS DR + R+ R D+ R P E V+ ERD RTVF Q+
Sbjct: 80 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLTTGEPVDNLSPEERDARTVFCMQL 139
Query: 257 CLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLG 316
+ RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF ++ SVP+AI L+GQ LLG
Sbjct: 140 AARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLG 199
Query: 317 QPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPF 376
P++V+ S+AEKN + +++A G +GG RLYVG+LHFN+TED LR +FEPF
Sbjct: 200 VPIIVQASQAEKNRL---AAMANNLQKG----NGGPMRLYVGSLHFNITEDMLRGIFEPF 252
Query: 377 GTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGL 434
G ++ + L D +TG KG+GF+ F+ E AR AL LNG E+ GR ++V VT++
Sbjct: 253 GKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTER--- 308
Query: 435 QDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALP 491
D G + T GD + D G +A R LM KL +
Sbjct: 309 LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL-----------------AEGAGIQ 346
Query: 492 LPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKN 551
LP+ AA+A + + G VP G L P A + + + S+C L +
Sbjct: 347 LPSTAAAAAAAAAAQAAALQLNGAVPL--GALN-----PAALTALSPALNLASQCFQLSS 399
Query: 552 MFDPKN 557
+F P+
Sbjct: 400 LFTPQT 405
>gi|170284570|gb|AAI61141.1| rbm23 protein [Xenopus (Silurana) tropicalis]
Length = 272
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 164/268 (61%), Gaps = 21/268 (7%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF D+ SVP+AI
Sbjct: 2 RTVFCMQLAARIRSRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQSVPLAIG 61
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
L+GQ LLG P++V+ S+AEKN + + S+ G GP RLYVG+LHFN+TED
Sbjct: 62 LTGQRLLGVPIIVQVSQAEKNRLAAMSN--NLQRGNPGPM-----RLYVGSLHFNITEDM 114
Query: 369 LRQVFEPFGTVELVQLPLDE--TGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKV 425
LR +FEPFG +E +QL L E TG KGFGF+ F E AR AL LNG E+ GR +KV
Sbjct: 115 LRGIFEPFGKIENIQL-LKEPDTGRSKGFGFITFTDAECARRALEQLNG-FELAGRPMKV 172
Query: 426 SAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL-DRSGSATTIAGSA---V 481
VTD L+ G + D D+ E G+ L A R LM KL + +G +A A +
Sbjct: 173 GHVTDH--LEGGGEASFLDSDELERTGIDLGATGRLQLMAKLAEGTGLQIPLAAQAALQL 230
Query: 482 TPAVNSTAL-PLPTA--PLLGAASAVST 506
A+ TAL P TA P L A ++S
Sbjct: 231 GGAIPLTALNPTLTALSPALNLAQSISA 258
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 174/297 (58%), Gaps = 25/297 (8%)
Query: 177 REVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKK 235
R+ R RS DR RSRD +R R L + S+ + P +E
Sbjct: 140 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPV 199
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
+ + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YV
Sbjct: 200 DNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYV 256
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG RL
Sbjct: 257 EFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGGPMRL 309
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLN 413
YVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL LN
Sbjct: 310 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 369
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
G E+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 370 G-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 417
>gi|426232776|ref|XP_004010396.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Ovis aries]
Length = 447
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/379 (38%), Positives = 199/379 (52%), Gaps = 45/379 (11%)
Query: 187 DREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKKEQVEPEVDPE 245
DR RSRD +R R L + S+ + + P +E + + PE E
Sbjct: 105 DRRHSNESRSRDWRREDRVHYRSPPLATGRRYGHSKSSHFREKSPVREPVDNLSPE---E 161
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF ++ SVP+
Sbjct: 162 RDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPL 221
Query: 306 AIALSGQPLLGQPVMVKPSEAEKN-LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
AI L+GQ LLG P++V+ S+AEKN L + S++ SGG RLYVG+LHFN+
Sbjct: 222 AIGLTGQRLLGVPIIVQASQAEKNRLAATASNLQKGSGGPV--------RLYVGSLHFNI 273
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRA 422
TED LR +FEPFG ++ + L D ETG KG+GF+ F+ E AR AL LNG E+ GR
Sbjct: 274 TEDMLRGIFEPFGKIDNIVLMKDSETGCSKGYGFITFSDSECARRALEQLNG-FELAGRP 332
Query: 423 IKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGS 479
+++ VT++ D G + T GD + D G +A R L+ KL GS
Sbjct: 333 MRIGHVTERP---DGGTDITFPDGDQELDLG-----SAGGRLQLVAKLAE--------GS 376
Query: 480 AVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGTALQVPTASVPIFD 538
+ LP TA A A + L + G VP G L A +
Sbjct: 377 GIQ-------LPTSTAAAAAVAQAAAAQAAALQLNGAVPL--GALNPAALTALSPALNLA 427
Query: 539 TIGVPSECLLLKNMFDPKN 557
+ + S+C L ++F P+
Sbjct: 428 SQAIASQCFQLSSLFTPQT 446
>gi|426232774|ref|XP_004010395.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Ovis aries]
Length = 463
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/379 (38%), Positives = 199/379 (52%), Gaps = 45/379 (11%)
Query: 187 DREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKKEQVEPEVDPE 245
DR RSRD +R R L + S+ + + P +E + + PE E
Sbjct: 121 DRRHSNESRSRDWRREDRVHYRSPPLATGRRYGHSKSSHFREKSPVREPVDNLSPE---E 177
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF ++ SVP+
Sbjct: 178 RDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPL 237
Query: 306 AIALSGQPLLGQPVMVKPSEAEKN-LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
AI L+GQ LLG P++V+ S+AEKN L + S++ SGG RLYVG+LHFN+
Sbjct: 238 AIGLTGQRLLGVPIIVQASQAEKNRLAATASNLQKGSGGPV--------RLYVGSLHFNI 289
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRA 422
TED LR +FEPFG ++ + L D ETG KG+GF+ F+ E AR AL LNG E+ GR
Sbjct: 290 TEDMLRGIFEPFGKIDNIVLMKDSETGCSKGYGFITFSDSECARRALEQLNG-FELAGRP 348
Query: 423 IKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGS 479
+++ VT++ D G + T GD + D G +A R L+ KL GS
Sbjct: 349 MRIGHVTERP---DGGTDITFPDGDQELDLG-----SAGGRLQLVAKLAE--------GS 392
Query: 480 AVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGTALQVPTASVPIFD 538
+ LP TA A A + L + G VP G L A +
Sbjct: 393 GIQ-------LPTSTAAAAAVAQAAAAQAAALQLNGAVPL--GALNPAALTALSPALNLA 443
Query: 539 TIGVPSECLLLKNMFDPKN 557
+ + S+C L ++F P+
Sbjct: 444 SQAIASQCFQLSSLFTPQT 462
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/440 (33%), Positives = 212/440 (48%), Gaps = 94/440 (21%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGV 292
+KEQ E + RD TV + LKADERD+YEFFS AGKVRD++ I D+ S +SKGV
Sbjct: 582 QKEQEEAK----RDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGV 637
Query: 293 GYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG- 351
YVEFY +V A++ +G L +P+ ++ S+AEKN A P
Sbjct: 638 AYVEFYTQEAVVKALSANGYMLKNRPIKIQSSQAEKNRA--------AKAAKHQPIDPND 689
Query: 352 -ARRLYVGNL---HFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDA 406
+LY+G L N++E +L+Q+F PFG + V++ D TG CKGFGF+QF R +A
Sbjct: 690 IPIKLYIGGLVGPLGNISEQELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEA 749
Query: 407 RNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGA--------------------------- 439
A+ + +EI GR +KVS D + L +
Sbjct: 750 IEAMGVLNGMEIAGRELKVSFAQDSKYI--LASEKEAKEKVLAKLMAKKAKAEEKVEEPD 807
Query: 440 NTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLG 499
N D DDD+GGGL A S+ LMQKL R TI S ++ + A + LG
Sbjct: 808 NEKIDNDDDDGGGLIAGAGSKIALMQKLQRD----TILDSGISSQFTTGANAIMQTTSLG 863
Query: 500 AASA--VSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
AA + ++ + P LV L NMF P +
Sbjct: 864 AAQSNTLNNITPNLV------------------------------------LCNMFSPND 887
Query: 558 ETY---EEFDMDIKEDVEGECSKFGKLKHIFVE-KDSAGFVYLRFENTQSAFAAQRALHG 613
E +F DI EDV+ ECSK+G + I+++ K+ G +Y+++ AF A + L+G
Sbjct: 888 ENIGSDPDFFSDIIEDVKEECSKYGSITKIWMDTKNIDGKIYIKYTKQDEAFKAFQFLNG 947
Query: 614 RWFAGKMITATFMVPQTYEA 633
R+F G +I A F+ + + +
Sbjct: 948 RYFGGSLINAYFVTEEMWNS 967
>gi|119586634|gb|EAW66230.1| RNA binding motif protein 23, isoform CRA_h [Homo sapiens]
Length = 467
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 174/297 (58%), Gaps = 25/297 (8%)
Query: 177 REVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKK 235
R+ R RS DR RSRD +R R L + S+ + P +E
Sbjct: 124 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPV 183
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
+ + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YV
Sbjct: 184 DNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYV 240
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG RL
Sbjct: 241 EFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGGPMRL 293
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLN 413
YVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL LN
Sbjct: 294 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 353
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
G E+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 354 G-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 401
>gi|358058197|dbj|GAA95989.1| hypothetical protein E5Q_02647 [Mixia osmundae IAM 14324]
Length = 959
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 167/529 (31%), Positives = 259/529 (48%), Gaps = 97/529 (18%)
Query: 125 DRGRDRDRRERDHDTDRDREKDK-------EKEREKSHRSGSQSERYRSD-RDERERSRD 176
D G DR+ R R T D D+ E++ + +H +GS+S + S RD+ ER
Sbjct: 146 DAGEDREHRSR-RSTAADLMPDQDAAYVPLEEDTKSAHSAGSRSRQLSSSHRDDEERHY- 203
Query: 177 REVIERERS-RDREVIERERSRDREVIERERSRDRELKEREKERESRDNDK-ESRRPKEK 234
R RS RD + R RD R+ R R+ + +E R + E+ K +
Sbjct: 204 -----RSRSGRDDRLDPRRSHRDEYSSPRDDHRRRDHVDSPREDARRHEPRYEAPPAKPR 258
Query: 235 KEQVEPEVDPERDQRTVFAYQICLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVG 293
P + E + R+VF Q+ + ++ ++ FF ++AG VR+ ++I+DR SRRSKGVG
Sbjct: 259 TPTPPPMTEEEHEMRSVFVSQLAARIGDQQLHAFFENQAGPVREAKVIVDRISRRSKGVG 318
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN------------LVQSNSSIAG-- 339
YVEF ++ +V A+ALSG +LG P+ V+ +EAEKN L+ + +I
Sbjct: 319 YVEFMELETVQRALALSGMKVLGVPIQVQYTEAEKNRQASTAQSSYGALMDAGFTIPAGS 378
Query: 340 -ASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGF 397
A+ G PY+ LYVG+L++++T D +R+VF PFG V V L D +G KG+ +
Sbjct: 379 DATPSGAVPYNV----LYVGSLNYSLTADDMREVFTPFGAVASVDLQTDPGSGKSKGYCY 434
Query: 398 VQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNA 457
VQF + DA +A ++ GR +++S +++++ + + + D G +LN
Sbjct: 435 VQFYKHVDAIHAREKMNGFQLAGRQLRISTISERNAILPPMSRSGPVALGDGEIGPNLNN 494
Query: 458 RSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVP 517
R LMQKL R+ +A S PP V
Sbjct: 495 IGRIELMQKLARTDAA-------------------------------SNQPPPTVMRP-- 521
Query: 518 THPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-S 576
+PTA+ S C+LLKNMFDP ET +D D+++DV+ E S
Sbjct: 522 ----------NIPTAA----------SRCILLKNMFDPAEETEPTWDTDLRDDVKEEIQS 561
Query: 577 KFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITAT 624
K+G + + V++DS G +YL+ E+T A A L+GRW +ITA
Sbjct: 562 KYGAVAELVVQRDSTEGAIYLKMEDTNGAAKALSGLNGRW----LITAV 606
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 174/297 (58%), Gaps = 25/297 (8%)
Query: 177 REVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKK 235
R+ R RS DR RSRD +R R L + S+ + P +E
Sbjct: 96 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPV 155
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
+ + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YV
Sbjct: 156 DNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYV 212
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG RL
Sbjct: 213 EFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGGPMRL 265
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLN 413
YVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL LN
Sbjct: 266 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 325
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
G E+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 326 G-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 373
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/270 (44%), Positives = 163/270 (60%), Gaps = 17/270 (6%)
Query: 203 ERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEP-EVDPE-RDQRTVFAYQICLKA 260
ER+RS R + R S + S ++ P E+ PE RD RTVF Q+ +
Sbjct: 189 ERKRSHSRSKDRNSRRRGSYSPRRRSPANGAGGDRTPPTELSPEERDARTVFCIQLSQRV 248
Query: 261 DERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVM 320
RD+ EFFS GKVRDVRLI+ ++R KG+ Y+EF D SV +A+ LSGQ LLG P+M
Sbjct: 249 RARDLEEFFSSVGKVRDVRLILCNKTKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIM 308
Query: 321 VKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVE 380
V+ ++AEKN +Q N++ A TGP RLYVG+LHFN+TED LR +FEPFG ++
Sbjct: 309 VQHTQAEKNRLQ-NAAPAFQPKSHTGPM-----RLYVGSLHFNITEDMLRGIFEPFGKID 362
Query: 381 LVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLG 438
+QL +D ETG KG+GF+ + +DA+ AL LNG E+ GR +KV VT++ L
Sbjct: 363 AIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRLMKVGNVTER-----LD 416
Query: 439 ANTTG-DFDDDEGGGLSLNARSRALLMQKL 467
NT+ D D+ + G+ L A R LM KL
Sbjct: 417 MNTSSLDTDEMDRTGIDLGATGRLQLMFKL 446
>gi|355778434|gb|EHH63470.1| hypothetical protein EGM_16442, partial [Macaca fascicularis]
Length = 366
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 199/370 (53%), Gaps = 50/370 (13%)
Query: 195 RSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKKEQVEPEVDPERDQRTVFA 253
RSRDR +R R L + S+ + P +E + + PE ERD RTVF
Sbjct: 39 RSRDRRHEDRVSYRSPPLAAGYRYGHSKSPHFREKSPVREPVDNLSPE---ERDARTVFC 95
Query: 254 YQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQP 313
Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF ++ SVP+AI L+GQ
Sbjct: 96 MQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQR 155
Query: 314 LLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVF 373
LLG P++V+ S+AEKN + +++A G SGG RLYVG+LHFN+TED LR +F
Sbjct: 156 LLGVPIIVQASQAEKNRL---AAMANNLQKG----SGGPMRLYVGSLHFNITEDMLRGIF 208
Query: 374 EPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQ 431
EPFG ++ + L D +TG KG+GF+ F+ E AR AL LNG E+ GR ++V VT++
Sbjct: 209 EPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTER 267
Query: 432 SGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNST 488
D G + T GD + D G +A R LM KL +
Sbjct: 268 ---LDGGTDITFPDGDQELDPG-----SAGGRLQLMAKL-----------------AEGS 302
Query: 489 ALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECL 547
+ LPT AA+A + L + G VP G L P A + + + S+C
Sbjct: 303 GIQLPTTAAAAAAAAAAAHAAALQLNGAVPL--GALN-----PAALTALSPALNLASQCF 355
Query: 548 LLKNMFDPKN 557
L ++F P+
Sbjct: 356 QLSSLFTPQT 365
>gi|116734694|ref|NP_060577.3| probable RNA-binding protein 23 isoform 2 [Homo sapiens]
gi|18848317|gb|AAH24208.1| RNA binding motif protein 23 [Homo sapiens]
gi|119586627|gb|EAW66223.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
gi|119586633|gb|EAW66229.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
Length = 423
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 174/297 (58%), Gaps = 25/297 (8%)
Query: 177 REVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKK 235
R+ R RS DR RSRD +R R L + S+ + P +E
Sbjct: 80 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPV 139
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
+ + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YV
Sbjct: 140 DNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYV 196
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG RL
Sbjct: 197 EFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGGPMRL 249
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLN 413
YVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL LN
Sbjct: 250 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 309
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
G E+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 310 G-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 357
>gi|383419607|gb|AFH33017.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 185/332 (55%), Gaps = 49/332 (14%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 152 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 209 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 261
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 321
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 322 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 372
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGT 525
L + + LPT AA+A + L + G VP G L
Sbjct: 373 L-----------------AEGSGIQLPTTAAAAAAAAAAAHAAALQLNGAVPL--GALN- 412
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + + S+C L ++F P+
Sbjct: 413 ----PAALTALSPALNLASQCFQLSSLFTPQT 440
>gi|355693134|gb|EHH27737.1| hypothetical protein EGK_18008 [Macaca mulatta]
Length = 441
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 185/332 (55%), Gaps = 49/332 (14%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 152 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 209 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 261
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 321
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 322 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 372
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGT 525
L + + LPT AA+A + L + G VP G L
Sbjct: 373 L-----------------AEGSGIQLPTTAAAAAAAAAAAHAAALQLNGAVPL--GALN- 412
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + + S+C L ++F P+
Sbjct: 413 ----PAALTALSPALNLASQCFQLSSLFTPQT 440
>gi|119586630|gb|EAW66226.1| RNA binding motif protein 23, isoform CRA_e [Homo sapiens]
Length = 449
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/276 (44%), Positives = 166/276 (60%), Gaps = 23/276 (8%)
Query: 199 REVIERERSRDRELKEREKERESRDNDKESRR--PKEKKEQVEPEVDPERDQRTVFAYQI 256
R+ R RS DR + R+ R D+ R P E V+ ERD RTVF Q+
Sbjct: 124 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGEPVDNLSPEERDARTVFCMQL 183
Query: 257 CLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLG 316
+ RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF ++ SVP+AI L+GQ LLG
Sbjct: 184 AARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLG 243
Query: 317 QPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPF 376
P++V+ S+AEKN + +++A G +GG RLYVG+LHFN+TED LR +FEPF
Sbjct: 244 VPIIVQASQAEKNRL---AAMANNLQKG----NGGPMRLYVGSLHFNITEDMLRGIFEPF 296
Query: 377 GTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGL 434
G ++ + L D +TG KG+GF+ F+ E AR AL LNG E+ GR ++V VT++
Sbjct: 297 GKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTER--- 352
Query: 435 QDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
D G + T GD + D G +A R LM KL
Sbjct: 353 LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 383
>gi|388490330|ref|NP_001253303.1| probable RNA-binding protein 23 [Macaca mulatta]
gi|380814244|gb|AFE78996.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
gi|384947950|gb|AFI37580.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 185/332 (55%), Gaps = 49/332 (14%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 152 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 209 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 261
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 321
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 322 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 372
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGT 525
L + + LPT AA+A + L + G VP G L
Sbjct: 373 L-----------------AEGSGIQLPTTAAAAAAAAAAAHAAALQLNGAVPL--GALN- 412
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + + S+C L ++F P+
Sbjct: 413 ----PAALTALSPALNLASQCFQLSSLFTPQT 440
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 211/414 (50%), Gaps = 49/414 (11%)
Query: 240 PEVDP-ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
PE++ ERD+RT+F Q+ + +++ FF + G V++ +++ DR S RSKGVGYVEF
Sbjct: 164 PELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFK 223
Query: 299 DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
D SV AI L+GQ LLG P++ + +EAEKN Q+ +S A + + P+ RLYVG
Sbjct: 224 DESSVAPAIQLTGQKLLGIPIIAQLTEAEKNR-QARNSEASSGNKHSAPF----HRLYVG 278
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
N+HF++ E+ L+ VFEPFG +E VQL DETG +G+GFVQF AR AL ++
Sbjct: 279 NIHFSIDENDLQSVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNGYDL 338
Query: 419 VGRAIKVSAVTD------------QSGLQDLGANTTGDFDDDEGG-GLSLNARSRALLMQ 465
GRAI+V D QS Q +N G GG G+ S
Sbjct: 339 GGRAIRVGLGNDKFTPENTQRTQSQSANQ---SNFQGSMFSGSGGRGVQAGGTS------ 389
Query: 466 KLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPG---Q 522
DR+G G+A + A++ T + A + + L+ L + P P +
Sbjct: 390 NFDRAGGREPEKGTAAS-ALDDTDV----AGVNFNNFSRDALMRKLARTDEPAEPSADDK 444
Query: 523 LGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKL 581
L T P+ + + S E E + ++++DV EC K+G +
Sbjct: 445 QQKILLPKTEPKPLPVNVNMASR------------EEGESWVKELEDDVRAECEEKYGHV 492
Query: 582 KHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
HI ++ +S G +YL+F+ Q A + L+GR+F G+ ITA +V Y + F
Sbjct: 493 VHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITAQPVVDAVYSSLF 546
>gi|116734698|ref|NP_001070820.1| probable RNA-binding protein 23 isoform 3 [Homo sapiens]
gi|119586628|gb|EAW66224.1| RNA binding motif protein 23, isoform CRA_c [Homo sapiens]
Length = 405
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 162/276 (58%), Gaps = 23/276 (8%)
Query: 199 REVIERERSRDRELKEREKERESRDNDKESRR--PKEKKEQVEPEVDPERDQRTVFAYQI 256
R+ R RS DR + R+ R D+ R P E V+ ERD RTVF Q+
Sbjct: 80 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGEPVDNLSPEERDARTVFCMQL 139
Query: 257 CLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLG 316
+ RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF ++ SVP+AI L+GQ LLG
Sbjct: 140 AARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLG 199
Query: 317 QPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPF 376
P++V+ S+AEKN + A +GG RLYVG+LHFN+TED LR +FEPF
Sbjct: 200 VPIIVQASQAEKNRL-------AAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPF 252
Query: 377 GTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGL 434
G ++ + L D +TG KG+GF+ F+ E AR AL LNG E+ GR ++V VT++
Sbjct: 253 GKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTER--- 308
Query: 435 QDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
D G + T GD + D G +A R LM KL
Sbjct: 309 LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 339
>gi|335310533|ref|XP_003362077.1| PREDICTED: probable RNA-binding protein 23 [Sus scrofa]
Length = 443
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 131/329 (39%), Positives = 182/329 (55%), Gaps = 43/329 (13%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 154 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 210
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A GT GG
Sbjct: 211 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKGT----GG 263
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 264 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 323
Query: 411 -NLNGQLEIVGRAIKVSAVTDQ-SGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
LNG E+ GR +++ VT++ G D+ GD + D G +A R LM KL
Sbjct: 324 EQLNG-FELAGRPMRIGHVTERLDGSTDI-TFPDGDQELDLG-----SAGGRLQLMAKLA 376
Query: 469 RSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQ 528
GS + + AL L A LGA + P L AL
Sbjct: 377 E-GSGIQLPTTXXXXXXXXXALQLNGAVPLGALN--------------PAALTALSPALN 421
Query: 529 VPTASVPIFDTIGVPSECLLLKNMFDPKN 557
+ + + + S+C L ++F P+
Sbjct: 422 LASQA--------IASQCFQLSSLFTPQT 442
>gi|387539272|gb|AFJ70263.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 439
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 183/331 (55%), Gaps = 49/331 (14%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 152 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 209 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 261
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 321
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 322 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 372
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L + + LPT AA+A L G VP G L
Sbjct: 373 L-----------------AEGSGIQLPTTAAAAAAAAAHAAALQL-NGAVPL--GALN-- 410
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + + S+C L ++F P+
Sbjct: 411 ---PAALTALSPALNLASQCFQLSSLFTPQT 438
>gi|33150650|gb|AAP97203.1|AF087905_1 splicing factor SF2 [Homo sapiens]
Length = 425
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 203/387 (52%), Gaps = 48/387 (12%)
Query: 177 REVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKK 235
R+ R RS DR RSRD +R R L + S+ + P +E
Sbjct: 80 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPV 139
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
+ + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YV
Sbjct: 140 DNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYV 196
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG RL
Sbjct: 197 EFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGGPMRL 249
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLN 413
YVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR A +
Sbjct: 250 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRACGTVE 309
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRS 470
L ++GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 310 WGLSLLGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL--- 358
Query: 471 GSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVP 530
+ LP+ AA+A + + G VP LG AL P
Sbjct: 359 --------------AEGAGIQLPSTAAAAAAAAAAQAAALQLNGAVP-----LG-ALN-P 397
Query: 531 TASVPIFDTIGVPSECLLLKNMFDPKN 557
A + + + S+C L ++F P+
Sbjct: 398 AALTALSPALNLASQCFQLSSLFTPQT 424
>gi|384947948|gb|AFI37579.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 185/332 (55%), Gaps = 49/332 (14%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 192
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 193 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 245
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 305
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 306 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 356
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGT 525
L + + LPT AA+A + L + G VP G L
Sbjct: 357 L-----------------AEGSGIQLPTTAAAAAAAAAAAHAAALQLNGAVPL--GALN- 396
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + + S+C L ++F P+
Sbjct: 397 ----PAALTALSPALNLASQCFQLSSLFTPQT 424
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 149/231 (64%), Gaps = 16/231 (6%)
Query: 241 EVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
E+ PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I ++R KG+ Y+EF D
Sbjct: 246 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRMITCNKTKRFKGIAYIEFED 305
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
SV +A+ LSGQ LLG P+MV+ ++AEKN +Q N++ A TGP RLYVG+
Sbjct: 306 PESVSLALGLSGQRLLGVPIMVQHTQAEKNRLQ-NAAPAFQPKSHTGPM-----RLYVGS 359
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLE 417
LHFN+TED LR +FEPFG ++++QL +D ETG KG+GF+ + +DA+ AL LNG E
Sbjct: 360 LHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FE 418
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNARSRALLMQKL 467
+ GR +KV VT++ L NTT D D+ + G+ L A R LM KL
Sbjct: 419 LAGRPMKVGNVTER-----LDMNTTSLDTDEMDRTGIDLGATGRLQLMFKL 464
>gi|380814242|gb|AFE78995.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
gi|383419605|gb|AFH33016.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 185/332 (55%), Gaps = 49/332 (14%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 192
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 193 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 245
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 305
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 306 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 356
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGT 525
L + + LPT AA+A + L + G VP G L
Sbjct: 357 L-----------------AEGSGIQLPTTAAAAAAAAAAAHAAALQLNGAVPL--GALN- 396
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + + S+C L ++F P+
Sbjct: 397 ----PAALTALSPALNLASQCFQLSSLFTPQT 424
>gi|48146631|emb|CAG33538.1| RNPC4 [Homo sapiens]
Length = 423
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 173/297 (58%), Gaps = 25/297 (8%)
Query: 177 REVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKK 235
R+ R RS DR RSRD +R R L + S+ + P +E
Sbjct: 80 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPV 139
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
+ + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YV
Sbjct: 140 DNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYV 196
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG RL
Sbjct: 197 EFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGGPMRL 249
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLN 413
YVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+G + F+ E AR AL LN
Sbjct: 250 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGLITFSDSECARRALEQLN 309
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
G E+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 310 G-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 357
>gi|387539270|gb|AFJ70262.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 423
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 183/331 (55%), Gaps = 49/331 (14%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 192
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 193 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 245
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 305
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 306 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDPG-----SAGGRLQLMAK 356
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L + + LPT AA+A L G VP G L
Sbjct: 357 L-----------------AEGSGIQLPTTAAAAAAAAAHAAALQL-NGAVPL--GALN-- 394
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + + S+C L ++F P+
Sbjct: 395 ---PAALTALSPALNLASQCFQLSSLFTPQT 422
>gi|410931844|ref|XP_003979305.1| PREDICTED: RNA-binding protein 39-like, partial [Takifugu rubripes]
Length = 324
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 168/279 (60%), Gaps = 32/279 (11%)
Query: 195 RSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAY 254
RS+ + + +E+S R +E+ R + DN + PE ERD RTVF
Sbjct: 3 RSKSKSPVRKEKSPVR--REKSPIRRAVDN-------------LTPE---ERDARTVFCM 44
Query: 255 QICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
Q+ + RD+ +FFS GKVRDVR+I DR+SRRSKG+ Y+EF + SVP+AI L+GQ L
Sbjct: 45 QLAARIRPRDLEDFFSAVGKVRDVRMISDRSSRRSKGIAYIEFVEASSVPLAIGLTGQRL 104
Query: 315 LGQPVMVKPSEAEKNLVQSNSSIAGASG----GGTGPYSGGARRLYVGNLHFNMTEDQLR 370
LG P++V+ S+AEKN + ++ A A+ G GP RLYVG+LHFN+TE+ LR
Sbjct: 105 LGVPIIVQASQAEKNRAAAAAAAAAAANNLQKGMMGPL-----RLYVGSLHFNITEEMLR 159
Query: 371 QVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAV 428
+FEPFG +E +QL +D +TG KG+GF+ FA E A+ AL LNG E+ GR +KV V
Sbjct: 160 GIFEPFGRIENIQLMMDTDTGRSKGYGFITFADAECAKKALEQLNG-FELAGRPMKVGHV 218
Query: 429 TDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL 467
T++S GA D +D E G+ L R LM +L
Sbjct: 219 TERS--DSSGAPAFLDGEDLERSGIDLGNPGRLQLMAQL 255
>gi|71003261|ref|XP_756311.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
gi|46096316|gb|EAK81549.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
Length = 640
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 209/456 (45%), Gaps = 127/456 (27%)
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFS---RAGKVRDVRLIMDRNSRRSKGVGYVE 296
PE+D + ++R+VF Q+ + +RD+ EFF G V+DVR++MDR + RSKGVGYVE
Sbjct: 239 PEID-DYEERSVFCSQLSARLGQRDLGEFFEDHLGEGAVQDVRIVMDRVTHRSKGVGYVE 297
Query: 297 FYDVMSVPMAIALSGQ-----PLLGQ---------------------PVMV-KPSEAEKN 329
F VP AI L+G+ P++ Q P M P+ A
Sbjct: 298 FAARELVPKAIELTGKIVFGIPIVVQRTDAARSNGGAPRGPGDVSNHPGMAPHPAVAATQ 357
Query: 330 L---VQSNSSI------AGAS--------------GGGTGPYSGGARRLYVGNLHFNMTE 366
L V +N+ + AGA G P + RLYVG+LHF++T+
Sbjct: 358 LDARVLANAPLPMQYHMAGAPIHLEAALRPPRALRPGPNMPNT--EARLYVGSLHFSLTD 415
Query: 367 DQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
+ ++ VFEPFG +E V L + ETG KGF F+QF + EDA+ AL + RAI+V
Sbjct: 416 EAVKTVFEPFGEIEYVDLHREPETGKSKGFCFIQFKKAEDAKKALEQMNGFVLADRAIRV 475
Query: 426 SAVTDQSGLQDLGANTTGDFDD--------------DEGGGLSLNARSRALLMQKLDRSG 471
V + G ++T G D D+GGG LN RA LM+KL R
Sbjct: 476 GNV-NAKGSGGGSSHTNGSAQDFQGGGHLPQLTSSFDDGGGAGLNPERRAALMEKLARHN 534
Query: 472 SATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPT 531
+ A A T TV P
Sbjct: 535 EPSPAASEATT--------------------------------TVQERPA---------- 552
Query: 532 ASVPIFDTIGVP---SECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVE 587
G+P S LLLKNMFDP ET +D D+ EDV+ EC +K+G + I VE
Sbjct: 553 ---------GIPESTSTSLLLKNMFDPAEETEPNWDTDLAEDVKEECQAKYGPVTSIHVE 603
Query: 588 KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITA 623
KDSAG +Y+ F N ++ A L+GR+F GK I+A
Sbjct: 604 KDSAGEIYVTFANLDASRKALDGLNGRFFGGKPISA 639
>gi|431907193|gb|ELK11259.1| Putative RNA-binding protein 23 [Pteropus alecto]
Length = 914
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 198/383 (51%), Gaps = 53/383 (13%)
Query: 181 ERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKKEQVE 239
R S DR RS DR +R R L + S+ + P +E + +
Sbjct: 80 HRSHSWDRRHSTESRSWDRRREDRVHYRSPPLATGRRYGHSKSPHFREKSPVREPVDNLS 139
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF +
Sbjct: 140 PE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCE 196
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
+ SVP+AI L+GQ LLG P++V+ S+AEKN + A A+ G SGG RLYVG+
Sbjct: 197 IQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLA-----AMANNLQKG--SGGPMRLYVGS 249
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLE 417
LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL LNG E
Sbjct: 250 LHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSESECARRALEQLNG-FE 308
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRSGSAT 474
+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 309 LAGRPMRVGHVTER---LDGGTDITFPDGDQELDPG-----SAGGRLQLMAKLAEG---- 356
Query: 475 TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASV 534
+G + + AL L A LGA + P L AL + + +
Sbjct: 357 --SGIQLPTTAAAAALQLNGAVPLGALN--------------PATLTALSPALNLASQA- 399
Query: 535 PIFDTIGVPSECLLLKNMFDPKN 557
+ S C L N+F P+
Sbjct: 400 -------IASHCFQLSNLFSPQT 415
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 189/365 (51%), Gaps = 55/365 (15%)
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
MD ++RSKG+ YVEF +V S +A+ L+G LLG P+ ++ S AEKN V + S+ S
Sbjct: 1 MDNKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPS 60
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
GP +LY+G+LH+N+TE+ L+ +FEPFG +E ++L D T +G+GFV +
Sbjct: 61 QQNKGP-----MKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTY 115
Query: 401 ARLEDARNALN-LNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEG--GGLSLNA 457
+DA+ AL+ LNG E+ GR +KV+ VT++S L A D+DE G+ L
Sbjct: 116 VNSDDAKKALDQLNG-FELAGRPMKVNHVTERSEYACLSA-----LDNDEADRSGVDLGT 169
Query: 458 RSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVP 517
R LM KL T L +P A L
Sbjct: 170 TGRLALMAKL-----------------AEGTGLEIPKAAL------------------AQ 194
Query: 518 THPGQLGTALQVPTASVPIFDTIGVP--SECLLLKNMFDPKNETYEEFDMDIKEDVEGEC 575
H GQ L SV I P ++C +L NMFDP T+ F+ +I++DV EC
Sbjct: 195 LHIGQNNPILGS-AGSVSSSSAIAPPVCTQCFMLSNMFDPHVATHSVFE-EIRDDVIEEC 252
Query: 576 SKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
+K G HIFV++ SA G VY++ + A LHGR+F+G++ITA ++ Y
Sbjct: 253 TKAGGCLHIFVDRTSAQGNVYVKCPSIAVATQCVNMLHGRYFSGRLITAAYVPLINYHQL 312
Query: 635 FPDSI 639
FPDS+
Sbjct: 313 FPDSV 317
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 190/365 (52%), Gaps = 55/365 (15%)
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
MD ++RSKG+ YVEF +V S +A+ L+G LLG P+ ++ S AEKN V + S+ S
Sbjct: 1 MDNKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPS 60
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGH-CKGFGFVQF 400
GP +LY+G+LH+N+TE+ L+ +FEPFG +E ++L D T + +G+GFV +
Sbjct: 61 QQNRGP-----MKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTY 115
Query: 401 ARLEDARNALN-LNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEG--GGLSLNA 457
+DA+ AL+ LNG E+ GR +KV+ VT++S L A D+DE G+ L
Sbjct: 116 VNSDDAKKALDQLNG-FELAGRPMKVNHVTERSEYACLSA-----LDNDEADRSGVDLGT 169
Query: 458 RSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVP 517
R LM KL T L +P A L
Sbjct: 170 TGRLALMAKL-----------------AEGTGLEIPKAAL------------------AQ 194
Query: 518 THPGQLGTALQVPTASVPIFDTIGVP--SECLLLKNMFDPKNETYEEFDMDIKEDVEGEC 575
H GQ L SV I P ++C +L NMFDP T+ F+ +I++DV EC
Sbjct: 195 LHIGQNNPILGS-AGSVSSSSAIAPPVCTQCFMLSNMFDPHVATHSVFE-EIRDDVIEEC 252
Query: 576 SKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAK 634
+K G HIFV++ SA G VY++ + A LHGR+F+G++ITA ++ Y
Sbjct: 253 TKAGGCLHIFVDRTSAQGNVYVKCPSIAVATQCVNMLHGRYFSGRLITAAYVPLINYHQL 312
Query: 635 FPDSI 639
FPDS+
Sbjct: 313 FPDSV 317
>gi|321259451|ref|XP_003194446.1| hypothetical protein CGB_E5340C [Cryptococcus gattii WM276]
gi|317460917|gb|ADV22659.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 615
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 207/438 (47%), Gaps = 101/438 (23%)
Query: 241 EVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYVEF 297
EVD E R++F Q+ + + + FF G VRD R++ D+ +RRSKG+GYVE
Sbjct: 236 EVDSE--ARSIFVSQLSARMTSQVLGLFFEDKLGRGAVRDARVVTDKVARRSKGIGYVEL 293
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG----------- 346
V V A+ALSG ++G P+ + +EAE+N S + + A+ +
Sbjct: 294 DSVDLVNKALALSGTVVMGIPINIMLTEAERN--HSGTELITATALASNARSHGGGGGRS 351
Query: 347 ---------PYSGGA------------------RRLYVGNLHFNMTEDQLRQVFEPFGTV 379
P S G RL+V NL F++T D +RQVFEPFG +
Sbjct: 352 SVPFTQNYPPLSTGLALPLGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPFGEI 411
Query: 380 ELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGA 439
E V L +D +G KG +VQF ++ A+ AL+ ++ GR IKV + Q+ G
Sbjct: 412 EFVDLHMDPSGLRKGTAYVQFKDVKSAQMALDAMAGFDLAGRLIKVQTI------QERGT 465
Query: 440 NTTGDFDDDEGG-GLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLL 498
T D +D G G L+A R LM KL R+ P+VN
Sbjct: 466 YQTPDLIEDSGNYGTRLDANQRQQLMFKLART-----------EPSVN------------ 502
Query: 499 GAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNE 558
+L P + G+ + VP D P+ +++ NMF+P+ E
Sbjct: 503 ------LSLSAPKISGS---------------QSKVPAMD----PTPRIVVHNMFNPEEE 537
Query: 559 TYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFA 617
T +D+D+ EDV+GE SK+GK+K I VEK SAG VY+ F +T SA A + L+GR+F
Sbjct: 538 TERNWDLDLAEDVKGEVESKYGKVKRIKVEKMSAGEVYIEFIDTDSAIKAVKGLNGRFFG 597
Query: 618 GKMITATFMVPQTYEAKF 635
G+ + ++ + A
Sbjct: 598 GRQLQVGYITEALFNAHL 615
>gi|410218752|gb|JAA06595.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307724|gb|JAA32462.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307728|gb|JAA32464.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 155/241 (64%), Gaps = 24/241 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 152 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG
Sbjct: 209 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGG 261
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TGH KG+GF+ F+ E AR AL
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRAL 321
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 322 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAK 372
Query: 467 L 467
L
Sbjct: 373 L 373
>gi|444729178|gb|ELW69605.1| RNA-binding protein 39 [Tupaia chinensis]
Length = 467
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 192/410 (46%), Gaps = 94/410 (22%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF DV SVP+AI L+GQ +LG P++V+ S+ E + +S + G G
Sbjct: 196 IAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQIESIQLMMDSETGRSKGYG------- 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL- 410
F+ F+ E A+ AL
Sbjct: 249 ---------------------------------------------FITFSDSECAKKALE 263
Query: 411 NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRS 470
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 264 QLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARL--- 317
Query: 471 GSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVP 530
A +PP Q + G L
Sbjct: 318 ------------------------------AEGTGLQIPPAAQQALQMS-GSLAFGAVAA 346
Query: 531 TASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS 590
+A + ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+S
Sbjct: 347 SALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNS 406
Query: 591 A-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
A G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 407 AQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 456
>gi|444728803|gb|ELW69245.1| putative RNA-binding protein 23 [Tupaia chinensis]
Length = 450
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 157/258 (60%), Gaps = 30/258 (11%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 140 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 196
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + A SGG
Sbjct: 197 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL-------AAMANNLQKGSGG 249
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 250 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 309
Query: 411 -NLNGQLEIVGRAIKVSAVTDQS-GLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
LNG E+ GR ++V VT+++ G D+ GD + D G +A R LM KL
Sbjct: 310 EQLNG-FELAGRPMRVGHVTERADGSTDI-TFPDGDQELDLG-----SAGGRLQLMAKL- 361
Query: 469 RSGSATTIAGSAVTPAVN 486
A++PA+N
Sbjct: 362 ---------AEALSPALN 370
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 147/231 (63%), Gaps = 16/231 (6%)
Query: 241 EVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
E+ PE RD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ Y+EF D
Sbjct: 233 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFED 292
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
SV +A+ LSGQ LLG P+MV+ ++AEKN +QS + TGP RLYVG+
Sbjct: 293 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQS-APPPFQPKAHTGPM-----RLYVGS 346
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLE 417
LHFN+TED LR +FEPFG ++++QL +D ETG KG+GF+ + +DA+ AL LNG E
Sbjct: 347 LHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FE 405
Query: 418 IVGRAIKVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNARSRALLMQKL 467
+ GR +KV VT++ L NT+ D D+ + G+ L A R LM KL
Sbjct: 406 LAGRPMKVGNVTER-----LDMNTSSLDTDEMDRSGIDLGATGRLQLMFKL 451
>gi|410218750|gb|JAA06594.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307726|gb|JAA32463.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 155/241 (64%), Gaps = 24/241 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 192
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG
Sbjct: 193 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGG 245
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TGH KG+GF+ F+ E AR AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRAL 305
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 306 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAK 356
Query: 467 L 467
L
Sbjct: 357 L 357
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/285 (42%), Positives = 166/285 (58%), Gaps = 21/285 (7%)
Query: 192 ERERSRDREVIERERS----RDRELKEREKERESRDNDKESRRPKEKKEQVEP-EVDPE- 245
E+ R R V ER+RS RD+ + R R + ++ P E+ PE
Sbjct: 204 EQPRKRLSPVRERKRSPSRPRDKTTRRRGSYSPRRRSQPNGGGGGGGGDRTPPTELSPEE 263
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
RD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ Y+EF D SV +
Sbjct: 264 RDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVAL 323
Query: 306 AIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMT 365
A+ LSGQ LLG P+MV+ ++AEKN +Q N++ A GP RLYVG+LHF++T
Sbjct: 324 ALGLSGQRLLGVPIMVQHTQAEKNRLQ-NATPAFQPKSHVGPM-----RLYVGSLHFDIT 377
Query: 366 EDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAI 423
E+ LR +FEPFG ++ +QL +D ET KG+GF+ + EDA+ AL LNG E+ GR +
Sbjct: 378 EEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQLNG-FELAGRPM 436
Query: 424 KVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNARSRALLMQKL 467
KV VT++ L NTT D D+ + G+ L A R LM KL
Sbjct: 437 KVGNVTER-----LDMNTTSLDTDEMDRTGIDLGATGRLQLMFKL 476
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS-AGFVYLR 597
T + ++C +L NMFDP+ ET +D++I++DV EC+K G + HI V+ S G VY++
Sbjct: 508 TPSIATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTASPTGTVYVK 567
Query: 598 FENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+T +A A ALHGRWFAG++ITA ++ Y + FPDS+
Sbjct: 568 CPSTTTAVLAVNALHGRWFAGRVITAAYVPVVNYHSMFPDSV 609
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 184/331 (55%), Gaps = 44/331 (13%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 153 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 209
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 210 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 262
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 263 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 322
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 323 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRLQLMAK 373
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L + + LPT AA+A + + GTVP G L A
Sbjct: 374 L-----------------AEGSGMQLPTTTAAAAAAAQAAAA-LQLNGTVPL--GALNPA 413
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
+ + + S+C L ++F P+
Sbjct: 414 ALTALSPALNLASQAIASQCFQLSSLFTPQT 444
>gi|389585114|dbj|GAB67845.1| splicing factor [Plasmodium cynomolgi strain B]
Length = 877
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 196/393 (49%), Gaps = 44/393 (11%)
Query: 258 LKADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLG 316
LKADERD+YEFFS AGKVRD++ I D+ S +SKGV YVEFY +V A++ +G L
Sbjct: 509 LKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQEAVVKALSANGYMLKN 568
Query: 317 QPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG--ARRLYVGNL---HFNMTEDQLRQ 371
+P+ ++ S+AEKN A P +LY+G L N++E +L+Q
Sbjct: 569 RPIKIQSSQAEKNRA--------AKAAKHQPIDPNDIPIKLYIGGLVGPLGNISEQELKQ 620
Query: 372 VFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 430
+F PFG + V++ D TG CKGFGF+QF R +A A+ + +EI GR +KVS D
Sbjct: 621 LFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGRELKVSFAQD 680
Query: 431 QSGLQDLGANTTGDFDDDEGGGLSLNARSR-ALLMQKLDRSGSATTIAGSAVTPAVNSTA 489
+ L+ ++ L+ Q L + A +++
Sbjct: 681 SKYI------------------LASEKEAKDKLIAQLLAKKAKAEEKVEEPDNEKIDNDD 722
Query: 490 LPLPTAPLLGAASAVSTLV-----PPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPS 544
+ GA S ++ + P L G T +Q + +T+ +
Sbjct: 723 DDGGGL-IAGAGSKIALMQKLQRDPILDSGISSQFATGANTIMQTAPLATAQPNTLNNIT 781
Query: 545 ECLLLKNMFDPKNETY---EEFDMDIKEDVEGECSKFGKLKHIFVE-KDSAGFVYLRFEN 600
L+L NMF P +E+ +F DI EDV+ ECSK+G + I+++ K+ G +Y+++ N
Sbjct: 782 PNLVLCNMFSPNDESIGSDPDFFTDIIEDVKEECSKYGSVTKIWLDTKNIDGKIYIKYAN 841
Query: 601 TQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
+ A + L+GR+F G +I A F+ + +++
Sbjct: 842 NDESLKAFQFLNGRYFGGSLINAYFLTTEMWDS 874
>gi|332222976|ref|XP_003260645.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Nomascus
leucogenys]
Length = 442
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 183/331 (55%), Gaps = 46/331 (13%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 152 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 209 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 261
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 321
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 322 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRLQLMAK 372
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L GS + LP AA+A + + G VP G L
Sbjct: 373 LAE--------GSGIQ-------LPTTATAAAAAAAAAAQAAALQLNGAVPL--GALN-- 413
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + S+C L ++F P+
Sbjct: 414 ---PAALTALSPALNFASQCFQLSSLFTPQT 441
>gi|114652057|ref|XP_001159475.1| PREDICTED: probable RNA-binding protein 23 isoform 10 [Pan
troglodytes]
Length = 442
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 138/201 (68%), Gaps = 13/201 (6%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 152 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG
Sbjct: 209 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGG 261
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TGH KG+GF+ F+ E AR AL
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRAL 321
Query: 411 -NLNGQLEIVGRAIKVSAVTD 430
LNG E+ GR ++V VT+
Sbjct: 322 EQLNG-FELAGRPMRVGHVTE 341
>gi|149756178|ref|XP_001494868.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Equus
caballus]
Length = 446
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 150/239 (62%), Gaps = 20/239 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 155 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 211
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + A SGG
Sbjct: 212 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL-------AAMANNLQKGSGG 264
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 265 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 324
Query: 411 -NLNGQLEIVGRAIKVSAVTDQ-SGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL 467
LNG E+ GR ++V VT++ G D+ GD + D G +A SR LM KL
Sbjct: 325 EQLNG-FELAGRPMRVGHVTERLDGSTDI-TFPDGDQELDLG-----SAGSRLQLMAKL 376
>gi|392574247|gb|EIW67384.1| hypothetical protein TREMEDRAFT_33681 [Tremella mesenterica DSM
1558]
Length = 619
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 263/555 (47%), Gaps = 103/555 (18%)
Query: 117 RNGRDRNR---DRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERER 173
RNG +R GRDR R R+ DR R +D+ +E +SHRS E R +++
Sbjct: 114 RNGNGHSRGPESEGRDR-RESREIRDDRYRSRDRSRESYRSHRSRDLREMTREEKEAERE 172
Query: 174 SRDREVIERERSRDREVIERERSRDREVIERE----RSRDRELKEREKERESRDNDKESR 229
RDRE+ E +R R ER R+R ER+ R R E + R+S KE
Sbjct: 173 KRDREMAEEKREAARLKEERFAQRERRTRERDFSPRRRRPSPTYEIPRPRDSPPPTKE-- 230
Query: 230 RPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNS 286
K+ ++ EVD E R+VF QI + D+ FF G VRD R++ DR S
Sbjct: 231 --KDPVSELLEEVDSE--ARSVFVSQISSRMTSSDLGLFFEDKLGRGAVRDARVVTDRGS 286
Query: 287 RRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNL--VQSNSSIAGASGGG 344
+RSKG+GYVE V V A+ALSG ++G P+ V +E+E+N + ++IA S
Sbjct: 287 KRSKGIGYVELDAVALVNRALALSGTIVMGMPIQVTLTESERNREGMDLAATIAKLSASK 346
Query: 345 T----------GPYSGGA------------------RRLYVGNLHFNMTEDQLRQVFEPF 376
P S G RL+V L +++ D ++QVF+PF
Sbjct: 347 ARPQVTYQTRFPPLSNGLYIPPGVDVDANRDASVPYHRLFVSGLAYSLAADDIKQVFDPF 406
Query: 377 GTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQS---- 432
G ++ V L D TG KG +VQF L+ A+ AL+ EI GR I+V + +++
Sbjct: 407 GQIDFVDLHHDVTGQSKGTAYVQFHDLKSAQTALDAMNGFEIAGRPIRVQTIQERAHISE 466
Query: 433 GLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPL 492
L+D G + G ++ +R LMQKL R+
Sbjct: 467 TLEDAGYSQ----------GRKMDNSTRMSLMQKLARND--------------------- 495
Query: 493 PTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNM 552
G SA ++ PL H + T + P+ P+ +L+ NM
Sbjct: 496 ------GPGSAHNS---PLQFSCHKMH------IIDNSTNNAPV-----APTPFILVNNM 535
Query: 553 FDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRAL 611
F+P+ ET +D+D+ EDV+GE SK+G++K I V+K SAG VY+ FE T ++ A + L
Sbjct: 536 FNPEEETERNWDLDLAEDVKGEIESKYGRVKRIKVDKMSAGDVYVEFEGTGASERAVKGL 595
Query: 612 HGRWFAGKMITATFM 626
HGR+F G+ + A ++
Sbjct: 596 HGRFFGGRSLRAGYI 610
>gi|410261842|gb|JAA18887.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349771|gb|JAA41489.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 138/201 (68%), Gaps = 13/201 (6%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 152 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG
Sbjct: 209 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGG 261
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TGH KG+GF+ F+ E AR AL
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRAL 321
Query: 411 -NLNGQLEIVGRAIKVSAVTD 430
LNG E+ GR ++V VT+
Sbjct: 322 EQLNG-FELAGRPMRVGHVTE 341
>gi|114652069|ref|XP_001159523.1| PREDICTED: probable RNA-binding protein 23 isoform 11 [Pan
troglodytes]
Length = 426
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 138/201 (68%), Gaps = 13/201 (6%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 192
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG
Sbjct: 193 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGG 245
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TGH KG+GF+ F+ E AR AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRAL 305
Query: 411 -NLNGQLEIVGRAIKVSAVTD 430
LNG E+ GR ++V VT+
Sbjct: 306 EQLNG-FELAGRPMRVGHVTE 325
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 205/413 (49%), Gaps = 45/413 (10%)
Query: 235 KEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGVG 293
KE++E + +RD TV + LKADERD+YEFFS AGKVRD++ I D+ S +SKGV
Sbjct: 476 KEEME---EAKRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVA 532
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG-- 351
YVEFY +V A+A +G L +P+ ++ S+AEKN A P
Sbjct: 533 YVEFYTQEAVIKALAANGMMLKNRPIKIQSSQAEKN--------RAAKAAKHQPIDPNDI 584
Query: 352 ARRLYVGNLH---FNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDAR 407
+LY+G L N+TE +L+Q+F PFG + V++ D TG KGFGF+QF + +A
Sbjct: 585 PLKLYIGGLLGPLSNITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAI 644
Query: 408 NALNLNGQLEIVGRAIKVSAVTDQSGLQDLGA-NTTGDFDDDEGGGLSLNARSRALLMQK 466
AL + +E+ GR IKV D L L NT + + ++N +K
Sbjct: 645 EALTVMNGMEVAGREIKVGYAQDSKYL--LACDNTQENILKQQQMAKNINTEEEEQDNEK 702
Query: 467 LDRSGSATT--IAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLG 524
+D IAG+ A L+ S + P +P+
Sbjct: 703 IDNDDGDGGGLIAGTGSKIA------------LMQKLQRDSIIDP-----NIPSRYATGA 745
Query: 525 TALQVPTASVP-IFDTIGVPSECLLLKNMFDPKNETY---EEFDMDIKEDVEGECSKFGK 580
A+ + VP + + L+L NMF +E +F DI EDV+ ECSK+GK
Sbjct: 746 NAIMARNSFVPSTNNINNNVTTNLVLSNMFSSNDENIGSDPDFFNDILEDVKEECSKYGK 805
Query: 581 LKHIFVE-KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYE 632
+ +I+++ K+ G +Y+++ N + + + L+GR+F G +I A F+ ++
Sbjct: 806 VVNIWLDTKNIDGKIYIKYSNNDESLKSFQFLNGRYFGGSLINAYFISNDVWD 858
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/331 (39%), Positives = 180/331 (54%), Gaps = 46/331 (13%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 152 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + A +GG
Sbjct: 209 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL-------AAMANNLQKGNGG 261
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 321
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 322 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAK 372
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L G+ + LP AA+A + + G VP G L
Sbjct: 373 LAE--------GAGIQ-------LPSTATAAAAAAAAAAQAAALQLNGAVPL--GALN-- 413
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + + S+C L ++F P+
Sbjct: 414 ---PAALTALSPALNLASQCFQLSSLFTPQT 441
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 202/371 (54%), Gaps = 42/371 (11%)
Query: 120 RDRNRDR--GRDRDRRERDHD-TDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRD 176
RD+ RDR G R R+++D + R R+K++EK+R KS ER +S RERS+D
Sbjct: 64 RDKERDRDGGEGRSRKDKDRSRSPRPRDKEREKDRRKS------KERSKSRSPRRERSKD 117
Query: 177 -REVIERERSRDREVIERERSRDR--EVIERERSRDRELKEREKERESRDNDKESRRPKE 233
+E R ++ +E+ RSR+R +I+ R R + S P+
Sbjct: 118 HKEKDHRSKNDHHRSVEKRRSRERGGGMIDHRRKSRERDHRRRSRSRDAGRRRRSMSPRH 177
Query: 234 KK---------------EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDV 278
+ ++V E +RD RTVF Q+ + RD+ EFFS GKVRDV
Sbjct: 178 YRRGRGGYGSYRDRTPGDEVSQE---DRDARTVFCMQLSQRIRARDLEEFFSSVGKVRDV 234
Query: 279 RLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIA 338
RLI ++R KG+ Y+EF D SV +A+ LSGQ LLG P+ V+ ++AEKN + + A
Sbjct: 235 RLITCNKTKRFKGIAYIEFKDPESVALALGLSGQRLLGIPISVQHTQAEKNRMANQPPPA 294
Query: 339 GASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGF 397
G RLYVG+LHFN+TED LR +FEPFG ++ +QL +D +TG KG+GF
Sbjct: 295 PPK------NPAGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDTDTGRSKGYGF 348
Query: 398 VQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLN 456
+ F +DA+ AL LNG E+ GR +KV VT++ D+ + + D D+ + G+ L
Sbjct: 349 ITFHNADDAKKALEQLNG-FELAGRPMKVGNVTER---LDVTTHASLDTDEMDRSGIELG 404
Query: 457 ARSRALLMQKL 467
A R LM KL
Sbjct: 405 ATGRLQLMFKL 415
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 542 VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS-AGFVYLRFEN 600
+ ++C LL NMFDP ET +D++I++DV EC+K G + H++V+K S +G VY++ N
Sbjct: 450 IATQCFLLSNMFDPSTETNPNWDVEIQDDVIEECNKHGGVLHVYVDKLSPSGNVYVKCPN 509
Query: 601 TQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
+A A ALHGRWFAG++I A ++ Y FPD+
Sbjct: 510 VATAVLAVNALHGRWFAGRVIGAAYVPLVNYYNLFPDA 547
>gi|301781268|ref|XP_002926045.1| PREDICTED: probable RNA-binding protein 23-like isoform 1
[Ailuropoda melanoleuca]
Length = 446
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/331 (39%), Positives = 182/331 (54%), Gaps = 44/331 (13%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 154 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 210
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + + ++ G +GP
Sbjct: 211 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMAN--NLQKGSSGPM--- 265
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 266 --RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 323
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 324 EQLNG-FELAGRPMRVGQVTER---LDGGIDITFPDGDQELDLG-----SAGGRLQLMAK 374
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L + + LPT AA+A + GTVP G L A
Sbjct: 375 L-----------------AEGSGIQLPTT-AAAAAAAAQAAAALQLNGTVPL--GALNPA 414
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
+ + + S+C L ++F P+
Sbjct: 415 ALTALSPALNLASQAIASQCFQLSSLFTPQT 445
>gi|58267808|ref|XP_571060.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112313|ref|XP_775132.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257784|gb|EAL20485.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227294|gb|AAW43753.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 615
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 206/438 (47%), Gaps = 101/438 (23%)
Query: 241 EVDPERDQRTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYVEF 297
EVD E R++F Q+ + + + FF G VRD R++ D+ +RRSKG+GYVE
Sbjct: 236 EVDSE--ARSIFVSQLSARMTSQVLGLFFEDKLGRGAVRDARVVTDKVARRSKGIGYVEL 293
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG----------- 346
V V A+ALSG ++G P+ + +EAE+N S + + A+ +
Sbjct: 294 DSVDLVNKALALSGTVVMGIPINIMLTEAERN--HSGTELITATALASNARSHGGGGGRS 351
Query: 347 ---------PYSGGA------------------RRLYVGNLHFNMTEDQLRQVFEPFGTV 379
P S G RL+V NL F++T D +RQVFEPFG +
Sbjct: 352 SVPFTQNYPPLSTGLALPPGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPFGEI 411
Query: 380 ELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGA 439
E V L D +G KG +VQF ++ A+ AL+ ++ GR IKV + Q+ G
Sbjct: 412 EFVDLHTDLSGLRKGTAYVQFKDVKSAQMALDAMAGFDLAGRLIKVQTI------QERGT 465
Query: 440 NTTGDFDDDEGG-GLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLL 498
T D +D G G L+A R LM KL R+ P VN +
Sbjct: 466 YQTPDLIEDSGNYGTRLDANQRQQLMFKLART-----------EPNVNLS---------- 504
Query: 499 GAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNE 558
L P + G+ + +P D P+ +++ NMF+P+ E
Sbjct: 505 --------LSAPKINGS---------------QSKIPAMD----PTPRIVVHNMFNPEEE 537
Query: 559 TYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFA 617
T +D+D+ EDV+GE SK+G++K I VEK SAG VY+ F +T SA A + L+GR+F
Sbjct: 538 TERNWDLDLAEDVKGEVESKYGRVKRIKVEKMSAGEVYIEFIDTDSAIKAVKGLNGRFFG 597
Query: 618 GKMITATFMVPQTYEAKF 635
G+ + A ++ + A
Sbjct: 598 GRQLQAGYITEALFNAHL 615
>gi|410261840|gb|JAA18886.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349769|gb|JAA41488.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349773|gb|JAA41490.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 138/201 (68%), Gaps = 13/201 (6%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 192
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG
Sbjct: 193 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGG 245
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TGH KG+GF+ F+ E AR AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRAL 305
Query: 411 -NLNGQLEIVGRAIKVSAVTD 430
LNG E+ GR ++V VT+
Sbjct: 306 EQLNG-FELAGRPMRVGHVTE 325
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 196/427 (45%), Gaps = 85/427 (19%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
RD TV + LKADERD+YEFFS AGKVRD++ I D+ S +SKGV YVEFY SV
Sbjct: 315 RDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVI 374
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLH--- 361
A++++G L +P+ V+ S+AEKN A A+ + +LY+G L
Sbjct: 375 KALSVNGYMLKNRPIKVQSSQAEKNRA------AKATKHHPIDPNDIPLKLYIGGLLGPL 428
Query: 362 FNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVG 420
N+TE +L+Q+F PFG + V++ D TG KGFGF+QF + +A A+ + +E+ G
Sbjct: 429 SNITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAG 488
Query: 421 RAIKVSAVTDQS------GLQDLGANTTGDFDDDEGGG---------------------- 452
R IKVS D L+DL GG
Sbjct: 489 REIKVSYAQDSKYLLASDALKDLNIPNLNQIKAATQGGQKSTNKEEEQDNEKIDNDDDDG 548
Query: 453 --LSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPP 510
L A S+ LMQKL R TI +++ + + L ++ ++ + P
Sbjct: 549 GGLITGASSKIALMQKLQRD----TIIDASIPNTYATGTNAMARNSLNNVSNPLNNITPN 604
Query: 511 LVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETY---EEFDMDI 567
+V L NMF P + + +F DI
Sbjct: 605 IV------------------------------------LCNMFSPNDSSIGSDPDFFSDI 628
Query: 568 KEDVEGECSKFGKLKHIFVE-KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
EDV ECSK+G + I++ K+ G +Y+++ + A + L+GR+F G +I A F+
Sbjct: 629 IEDVREECSKYGNIIKIWLNSKNIDGKIYIKYTKNDESLKAFQCLNGRYFGGSLINAYFI 688
Query: 627 VPQTYEA 633
+E+
Sbjct: 689 SNAIWES 695
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/268 (45%), Positives = 158/268 (58%), Gaps = 41/268 (15%)
Query: 207 SRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVY 266
S+ KE+ RE DN + PE ERD RTVF Q+ + RD+
Sbjct: 124 SKSPHFKEKSPVREPIDN-------------LSPE---ERDARTVFCMQLAARIRPRDLE 167
Query: 267 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA 326
+FFS GKVRDVR+I DRNSRRSKG+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+A
Sbjct: 168 DFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQA 227
Query: 327 EKN--LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQL 384
EKN +N+ G SGG RLYVG+LHFN+TED LR +FEPFG ++ + L
Sbjct: 228 EKNRPAAMANNLQKG---------SGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVL 278
Query: 385 PLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT 442
D +TG KG+GF+ F+ E AR AL LNG E+ GR ++V VT++ D G + T
Sbjct: 279 MKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTER---LDGGTDIT 334
Query: 443 ---GDFDDDEGGGLSLNARSRALLMQKL 467
GD + D G +A R LM KL
Sbjct: 335 FPDGDQELDLG-----SAGGRLQLMAKL 357
>gi|114652071|ref|XP_522797.2| PREDICTED: probable RNA-binding protein 23 isoform 12 [Pan
troglodytes]
Length = 408
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 137/200 (68%), Gaps = 13/200 (6%)
Query: 233 EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 292
E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 119 EPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI 175
Query: 293 GYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA 352
YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG
Sbjct: 176 AYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGGP 228
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL- 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TGH KG+GF+ F+ E AR AL
Sbjct: 229 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALE 288
Query: 411 NLNGQLEIVGRAIKVSAVTD 430
LNG E+ GR ++V VT+
Sbjct: 289 QLNG-FELAGRPMRVGHVTE 307
>gi|332222974|ref|XP_003260644.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Nomascus
leucogenys]
Length = 426
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 154/241 (63%), Gaps = 24/241 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 192
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 193 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 245
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 305
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 306 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRLQLMAK 356
Query: 467 L 467
L
Sbjct: 357 L 357
>gi|395503034|ref|XP_003755878.1| PREDICTED: probable RNA-binding protein 23 [Sarcophilus harrisii]
Length = 451
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 152/241 (63%), Gaps = 24/241 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 164 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 220
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 221 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 273
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KGFGF+ F+ E AR AL
Sbjct: 274 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRAL 333
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLN---ARSRALLMQK 466
LNG E+ GR ++V VT++ L T F D GG L+ A R LM K
Sbjct: 334 EQLNG-FELAGRPMRVGHVTER-----LDGGTDITFPD---GGEELDLGTAGGRLQLMAK 384
Query: 467 L 467
L
Sbjct: 385 L 385
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 210/439 (47%), Gaps = 93/439 (21%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD+RTVF Q+ + R++ EFF +AG V + +++ DR S RSKGVGYVEF SV
Sbjct: 171 ERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEESVA 230
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKN-LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
A+ L+GQ LLG PV+V+P+EAEKN V++ S+ GT S RLYVGN+HF+
Sbjct: 231 AALQLTGQKLLGIPVIVQPTEAEKNRAVKTEST-------GTQQTSVPFHRLYVGNIHFS 283
Query: 364 MTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL------------- 410
+TE L+ VFEPFG +E VQL D++G +G+GFVQF AR AL
Sbjct: 284 ITEQDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPI 343
Query: 411 ---------------NL-------NGQLEIVGRAIKVSAVT---------DQSGL--QDL 437
NL NGQ + G A S D++G D
Sbjct: 344 RVGLGNDKFTPESTANLLRGFQGPNGQQQYQGSAFSGSGGRGAAGQPSNFDRAGGRDNDK 403
Query: 438 GANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPL 497
G+ + DD + G++ N SR LM+KL R+ +T P +
Sbjct: 404 GSGASA-LDDTDVAGVNFNNFSRDALMRKLARTDEPSTTQ---------------PERQI 447
Query: 498 LGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
L T V PL V + + G +++ F C
Sbjct: 448 L----KPRTEVKPLPINNV--NQAKFGQGNTYDSSTDQFF--------CFY--------R 485
Query: 558 ETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWF 616
E +++ +++EDV E K+G + HI ++ +S G +YL+F+ Q A + L+GR+F
Sbjct: 486 EEGDDWVKELEEDVRQEAEEKYGHVVHISLDPNSQGDIYLKFDRVQGGENAIKGLNGRYF 545
Query: 617 AGKMITATFMVPQTYEAKF 635
G+MITA +V Y + F
Sbjct: 546 GGRMITAAPVVDAFYSSLF 564
>gi|149756182|ref|XP_001494921.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Equus
caballus]
Length = 412
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 149/238 (62%), Gaps = 20/238 (8%)
Query: 233 EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 292
E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 122 EPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI 178
Query: 293 GYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA 352
YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + A SGG
Sbjct: 179 AYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL-------AAMANNLQKGSGGP 231
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL- 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 232 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 291
Query: 411 NLNGQLEIVGRAIKVSAVTDQ-SGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL 467
LNG E+ GR ++V VT++ G D+ GD + D G +A SR LM KL
Sbjct: 292 QLNG-FELAGRPMRVGHVTERLDGSTDI-TFPDGDQELDLG-----SAGSRLQLMAKL 342
>gi|301781270|ref|XP_002926046.1| PREDICTED: probable RNA-binding protein 23-like isoform 2
[Ailuropoda melanoleuca]
Length = 430
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/331 (39%), Positives = 182/331 (54%), Gaps = 44/331 (13%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 138 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 194
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + + ++ G +GP
Sbjct: 195 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMAN--NLQKGSSGPM--- 249
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 250 --RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 307
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 308 EQLNG-FELAGRPMRVGQVTER---LDGGIDITFPDGDQELDLG-----SAGGRLQLMAK 358
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L + + LPT AA+A + GTVP G L A
Sbjct: 359 L-----------------AEGSGIQLPTT-AAAAAAAAQAAAALQLNGTVPL--GALNPA 398
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
+ + + S+C L ++F P+
Sbjct: 399 ALTALSPALNLASQAIASQCFQLSSLFTPQT 429
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/241 (47%), Positives = 154/241 (63%), Gaps = 24/241 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 192
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG
Sbjct: 193 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGG 245
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 305
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 306 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAK 356
Query: 467 L 467
L
Sbjct: 357 L 357
>gi|126277398|ref|XP_001369153.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Monodelphis
domestica]
Length = 433
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 152/241 (63%), Gaps = 24/241 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 146 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 202
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 203 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 255
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KGFGF+ F+ E AR AL
Sbjct: 256 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRAL 315
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLN---ARSRALLMQK 466
LNG E+ GR ++V VT++ L T F D GG L+ A R LM K
Sbjct: 316 EQLNG-FELAGRPMRVGHVTER-----LDGGTDITFPD---GGEELDLGTAGGRLQLMAK 366
Query: 467 L 467
L
Sbjct: 367 L 367
>gi|410961884|ref|XP_003987508.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Felis catus]
Length = 411
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/240 (47%), Positives = 153/240 (63%), Gaps = 24/240 (10%)
Query: 233 EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 292
E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 120 EPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI 176
Query: 293 GYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA 352
YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 177 AYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGGP 229
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL- 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 230 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 289
Query: 411 NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 290 QLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRLQLMAKL 340
>gi|397473315|ref|XP_003808160.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Pan paniscus]
Length = 408
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 149/240 (62%), Gaps = 24/240 (10%)
Query: 233 EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 292
E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 119 EPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI 175
Query: 293 GYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA 352
YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + A +GG
Sbjct: 176 AYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL-------AAMANNLQKGNGGP 228
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL- 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 229 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 288
Query: 411 NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 289 QLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 339
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 221/458 (48%), Gaps = 90/458 (19%)
Query: 198 DREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQIC 257
DR+ IE + R +LK+ KE +R KE++E + R TV +
Sbjct: 86 DRDEIEEAKLRAEKLKQI----------KEFKRNKEQEEAM-------RTDLTVLVANLH 128
Query: 258 LKADERDVYEFFS-RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLG 316
+K ER++YE FS AGK+RD++L+ D+ + R KGV YVEFY SV A+++SG LL
Sbjct: 129 MKITEREIYELFSDGAGKIRDIQLVRDQRTGRPKGVAYVEFYTNDSVIKALSMSGHFLLN 188
Query: 317 QPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL---HFNMTEDQLRQVF 373
QP+ V S+AEKN A AS S RLYVG L N++E++LRQ+F
Sbjct: 189 QPIRVTASQAEKN------RAAKASKEFQTNESEMPLRLYVGGLVDSLVNISENELRQLF 242
Query: 374 EPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ- 431
PFG + V+L D TG KGF F+++ R +AR A+ EI GR IKV+ +D
Sbjct: 243 VPFGEILSVELHRDPFTGKPKGFAFIEYKRASEAREAMLAMDGFEISGRNIKVNLTSDNR 302
Query: 432 -------SGLQDLGANTTGDFD-------DDEGGGLSLNARSRALLMQKLDRSGSATTIA 477
+GL + T D D ++ L A S+ LM++L+R G
Sbjct: 303 PNAYTALNGLNN-AQKITNDLDRLEKEKMEEYDSDLMPGAVSKIELMKRLNRDGD----- 356
Query: 478 GSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIF 537
P N T+ L A ++ SA PG
Sbjct: 357 ----LPTSNKTS--LDAAKVIPGVSA----------------PGNSA------------- 381
Query: 538 DTIGVPSECLLLKNMF---DPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GF 593
T+GV +E ++L NMF DP+ EF D+ EDV+ EC K+G + +++ K G
Sbjct: 382 -TVGV-TENIVLSNMFSATDPQIMEDPEFFTDLVEDVKSECKKYGNVLQVYINKSVPDGM 439
Query: 594 VYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTY 631
V+++F + A AA ++L+ R+F G I+A F T+
Sbjct: 440 VWVKFATVEQAVAAFQSLNDRFFGGNSISAAFATNHTW 477
>gi|301781272|ref|XP_002926047.1| PREDICTED: probable RNA-binding protein 23-like isoform 3
[Ailuropoda melanoleuca]
Length = 412
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 152/240 (63%), Gaps = 24/240 (10%)
Query: 233 EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 292
E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 121 EPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI 177
Query: 293 GYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA 352
YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + + ++ G +GP
Sbjct: 178 AYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMAN--NLQKGSSGPM---- 231
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL- 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 232 -RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 290
Query: 411 NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 291 QLNG-FELAGRPMRVGQVTER---LDGGIDITFPDGDQELDLG-----SAGGRLQLMAKL 341
>gi|281343373|gb|EFB18957.1| hypothetical protein PANDA_015655 [Ailuropoda melanoleuca]
Length = 369
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 153/241 (63%), Gaps = 24/241 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 77 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 133
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + + ++ G +GP
Sbjct: 134 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMAN--NLQKGSSGPM--- 188
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 189 --RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 246
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 247 EQLNG-FELAGRPMRVGQVTER---LDGGIDITFPDGDQELDLG-----SAGGRLQLMAK 297
Query: 467 L 467
L
Sbjct: 298 L 298
>gi|126277401|ref|XP_001369188.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Monodelphis
domestica]
Length = 415
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 136/200 (68%), Gaps = 13/200 (6%)
Query: 233 EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 292
E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 129 EPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI 185
Query: 293 GYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA 352
YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 186 AYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGGP 238
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL- 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KGFGF+ F+ E AR AL
Sbjct: 239 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALE 298
Query: 411 NLNGQLEIVGRAIKVSAVTD 430
LNG E+ GR ++V VT+
Sbjct: 299 QLNG-FELAGRPMRVGHVTE 317
>gi|73962355|ref|XP_848788.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Canis lupus
familiaris]
Length = 429
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 148/237 (62%), Gaps = 26/237 (10%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 137 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 193
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + + ++ G +GP
Sbjct: 194 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMAN--NLQKGSSGPM--- 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 249 --RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 306
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDE--------GGGLSLNAR 458
LNG E+ GR ++V VT++ L T F D E GG L L A+
Sbjct: 307 EQLNG-FELAGRPMRVGHVTER-----LDGGTDITFPDGEQELDLGSAGGRLQLMAK 357
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 171/293 (58%), Gaps = 18/293 (6%)
Query: 184 RSRDREVIERERSRDREVIERERS-RDRELKEREKERESRDNDKESRRPKEKKEQVE--- 239
R+ VI S D +I S RD + + R + R +D +R+ VE
Sbjct: 7 RTMSMTVIVVTTSIDLGMIASATSHRDMKNRVRVRNRTGVASDARNRKLSLSILAVELYS 66
Query: 240 --PEVDPE-RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVE 296
PE+ PE RD RTVF +Q+ + +RD+ +FF+ GK+RDVRLIMD ++RSKG+ YVE
Sbjct: 67 CRPELTPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKGIAYVE 126
Query: 297 FYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLY 356
F +V S +A+ L+G LLG P+ ++ S AEKN + + S+ + GP +LY
Sbjct: 127 FREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRMNAIPSVPKPTQQNRGPM-----KLY 181
Query: 357 VGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNG 414
+G+LH+N+TE+ L+ +FEPFG ++ ++L D TG +G+GFV +A +DA+ AL+ LNG
Sbjct: 182 IGSLHYNITEEMLKGIFEPFGKIDDIKLIKDPATGRSQGYGFVTYANSDDAKKALDQLNG 241
Query: 415 QLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL 467
E+ GR +KV+ VT++ + A + D DD + G+ L R LM KL
Sbjct: 242 -FELAGRPMKVNHVTERG---EYAALSALDNDDADRAGVDLGTTGRLALMAKL 290
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 166/271 (61%), Gaps = 16/271 (5%)
Query: 214 EREKERESRDNDKESRRPKE-KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRA 272
E + R R KE + KE + +P+ D RD RTVF Q+ +A ER++ EFFS
Sbjct: 173 EEDNYRSKRSRSKERNKDKEISPVRDDPDAD-TRDARTVFVMQLSQRAKERELKEFFSSV 231
Query: 273 GKVRDVRLIMDRNSRRSKGVGYVEFYDVM-SVPMAIALSGQPLLGQPVMVKPSEAEKNLV 331
GKVR V++I DRNSRRSKGVGYVE YDV SVP+A+ L+ Q LLG P++V+PS AEKN
Sbjct: 232 GKVRTVKIITDRNSRRSKGVGYVE-YDVADSVPLALGLNNQKLLGVPIIVQPSHAEKN-- 288
Query: 332 QSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETG 390
+S +GP RLYVG+LH+N+TE LR +FEPFG ++ +QL +D +
Sbjct: 289 RSAGQNVTLQKVNSGPM-----RLYVGSLHYNITEAMLRGIFEPFGKIDNIQLMMDTDAN 343
Query: 391 HCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDE 449
KG+GF+ F EDA+ AL+ LNG E+ GR +KV+ VT+++ Q A + D ++ +
Sbjct: 344 RSKGYGFITFHDAEDAKRALDQLNG-FELAGRPMKVNHVTERNE-QGQQAPSFLDSEELD 401
Query: 450 GGGLSLNARSRALLMQKLDRSGSATTIAGSA 480
G++LN R LM KL G+ I +A
Sbjct: 402 KRGITLNTTGRLQLMAKL-AEGTGFQIPAAA 431
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 544 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQ 602
+ C +L NMFDP+ ET ++ DI++DV EC+K G + HI V+K S G VY++ Q
Sbjct: 556 TACFMLSNMFDPQAETMLGWETDIRDDVIEECNKHGGVLHIHVDKASPQGNVYVKCPTAQ 615
Query: 603 SAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
A AA LH RWFAGKMITA +M Y A FP +
Sbjct: 616 IAMAALNNLHNRWFAGKMITAAYMPVANYHAIFPQA 651
>gi|115497272|ref|NP_001069104.1| probable RNA-binding protein 23 [Bos taurus]
gi|113911797|gb|AAI22594.1| RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 177/332 (53%), Gaps = 42/332 (12%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 167 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 223
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + A SGG
Sbjct: 224 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL-------AAMANNLQKGSGG 276
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LH N+TED LR + EPFG ++ + L D ETG KG+GF+ F+ E AR AL
Sbjct: 277 PVRLYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRAL 336
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR +++ VT++ D G + T GD + D G +A LM K
Sbjct: 337 EQLNG-FELAGRPMRIGHVTERP---DGGTDITFPDGDQELDLG-----SAGGHLQLMAK 387
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGT 525
L GS + LP TA A A + L + G VP G L
Sbjct: 388 LAE--------GSGIQ-------LPTTTAAAAAVAQAAAAQAAALQLNGAVPL--GALNP 430
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
A + + + S+C L ++F P+
Sbjct: 431 AALTALSPALNLASQAIASQCFQLSSLFTPQT 462
>gi|426376372|ref|XP_004054975.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Gorilla
gorilla gorilla]
Length = 437
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 179/331 (54%), Gaps = 51/331 (15%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 152 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG
Sbjct: 209 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGG 261
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 321
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 322 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRLQLMAK 372
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L + A + AL L A LGA +
Sbjct: 373 LAEGAGIQLPTTATAAAAAQAAALQLNGAVPLGALN------------------------ 408
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + + S+C L ++F P+
Sbjct: 409 ---PAALTALSPALNLASQCFQLSSLFTPQT 436
>gi|440906315|gb|ELR56591.1| Putative RNA-binding protein 23 [Bos grunniens mutus]
Length = 463
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 177/332 (53%), Gaps = 42/332 (12%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 167 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 223
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + A +GG
Sbjct: 224 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL-------AAMANNLQKGNGG 276
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LH N+TED LR + EPFG ++ + L D ETG KG+GF+ F+ E AR AL
Sbjct: 277 PVRLYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRAL 336
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR +++ VT++ D G + T GD + D G +A LM K
Sbjct: 337 EQLNG-FELAGRPMRIGHVTERP---DGGTDITFPDGDQELDLG-----SAAGHLQLMAK 387
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPL-VQGTVPTHPGQLGT 525
L GS + LP TA A A + L + G VP G L
Sbjct: 388 LAE--------GSGIQ-------LPTTTAAAAAVAQAAAAQAAALQLNGAVPL--GALNP 430
Query: 526 ALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
A + + V S+C L ++F P+
Sbjct: 431 AALTALSPALNLASQAVASQCFQLSSLFTPQT 462
>gi|296483628|tpg|DAA25743.1| TPA: RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 146/235 (62%), Gaps = 22/235 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 167 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 223
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + A SGG
Sbjct: 224 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL-------AAMANNLQKGSGG 276
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LH N+TED LR + EPFG ++ + L D ETG KG+GF+ F+ E AR AL
Sbjct: 277 PVRLYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRAL 336
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDD---EGGGLSLNAR 458
LNG E+ GR +++ VT++ D G + T GD + D GG L L A+
Sbjct: 337 EQLNG-FELAGRPMRIGHVTERP---DGGTDITFPDGDQELDLGSAGGHLQLMAK 387
>gi|149756180|ref|XP_001494897.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Equus
caballus]
Length = 430
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 171/286 (59%), Gaps = 23/286 (8%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 139 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 195
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + A SGG
Sbjct: 196 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL-------AAMANNLQKGSGG 248
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 308
Query: 411 -NLNGQLEIVGRAIKVSAVTDQ-SGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL- 467
LNG E+ GR ++V VT++ G D+ GD + D G +A SR LM KL
Sbjct: 309 EQLNG-FELAGRPMRVGHVTERLDGSTDI-TFPDGDQELDLG-----SAGSRLQLMAKLA 361
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAA--SAVSTLVPPL 511
+ SG +A A + AL L A LGA +A++ L P L
Sbjct: 362 EGSGIQLPTTAAAAAAAAQAAALQLNGAVPLGALNPTALTALSPAL 407
>gi|291403543|ref|XP_002718110.1| PREDICTED: RNA binding motif protein 23 isoform 3 [Oryctolagus
cuniculus]
Length = 428
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 143/227 (62%), Gaps = 26/227 (11%)
Query: 206 RSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDV 265
+S+ ++E+ R+ DN + PE ERD RTV Q+ + RD+
Sbjct: 125 QSKSPHIREKSPVRQPVDN-------------LSPE---ERDARTVLCMQLAARIRPRDL 168
Query: 266 YEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSE 325
+FFS GKVRDVR+I DRNSRRSKG+ YVEF D+ +VP+AI L+GQ LLG P+MV+ S+
Sbjct: 169 EDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQAVPLAIGLTGQRLLGVPIMVQASQ 228
Query: 326 AEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLP 385
AEKN + +++A G SGG RLYVG+LHFN+TED LR +FEPFG ++ + L
Sbjct: 229 AEKNRL---AAMANNLQKG----SGGPLRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLM 281
Query: 386 LD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTD 430
D +TG KG+GF+ F+ E R AL LNG E+ GR ++V VT+
Sbjct: 282 KDSDTGRSKGYGFITFSDSECGRRALEQLNG-FELAGRPMRVGHVTE 327
>gi|395859409|ref|XP_003802032.1| PREDICTED: probable RNA-binding protein 23 [Otolemur garnettii]
Length = 449
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 150/235 (63%), Gaps = 22/235 (9%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 157 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 213
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + + ++ G +GP
Sbjct: 214 IAYVEFCEIQSVPLAIGLTGQQLLGVPIIVQASQAEKNRLAAMAN--NLQKGSSGPM--- 268
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
L+VG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 269 --HLFVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 326
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDD---EGGGLSLNAR 458
LNG E+ GR +KV VT++ D G + T GD + D GG L L A+
Sbjct: 327 EQLNG-FELAGRPMKVGQVTER---LDGGTDITFPDGDQELDLGSTGGRLQLMAK 377
>gi|291403541|ref|XP_002718109.1| PREDICTED: RNA binding motif protein 23 isoform 2 [Oryctolagus
cuniculus]
Length = 444
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 143/227 (62%), Gaps = 26/227 (11%)
Query: 206 RSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDV 265
+S+ ++E+ R+ DN + PE ERD RTV Q+ + RD+
Sbjct: 141 QSKSPHIREKSPVRQPVDN-------------LSPE---ERDARTVLCMQLAARIRPRDL 184
Query: 266 YEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSE 325
+FFS GKVRDVR+I DRNSRRSKG+ YVEF D+ +VP+AI L+GQ LLG P+MV+ S+
Sbjct: 185 EDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQAVPLAIGLTGQRLLGVPIMVQASQ 244
Query: 326 AEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLP 385
AEKN + +++A G SGG RLYVG+LHFN+TED LR +FEPFG ++ + L
Sbjct: 245 AEKNRL---AAMANNLQKG----SGGPLRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLM 297
Query: 386 LD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTD 430
D +TG KG+GF+ F+ E R AL LNG E+ GR ++V VT+
Sbjct: 298 KDSDTGRSKGYGFITFSDSECGRRALEQLNG-FELAGRPMRVGHVTE 343
>gi|345804022|ref|XP_003435135.1| PREDICTED: probable RNA-binding protein 23 [Canis lupus familiaris]
Length = 411
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 147/236 (62%), Gaps = 26/236 (11%)
Query: 233 EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 292
E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 120 EPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI 176
Query: 293 GYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA 352
YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + + ++ G +GP
Sbjct: 177 AYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMAN--NLQKGSSGPM---- 230
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL- 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 231 -RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 289
Query: 411 NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDE--------GGGLSLNAR 458
LNG E+ GR ++V VT++ L T F D E GG L L A+
Sbjct: 290 QLNG-FELAGRPMRVGHVTER-----LDGGTDITFPDGEQELDLGSAGGRLQLMAK 339
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 179/331 (54%), Gaps = 51/331 (15%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 192
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG
Sbjct: 193 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGG 245
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 305
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQK 466
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM K
Sbjct: 306 EQLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRLQLMAK 356
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L + A + AL L A LGA +
Sbjct: 357 LAEGAGIQLPTTATAAAAAQAAALQLNGAVPLGALN------------------------ 392
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + + S+C L ++F P+
Sbjct: 393 ---PAALTALSPALNLASQCFQLSSLFTPQT 420
>gi|428672327|gb|EKX73241.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 511
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 216/435 (49%), Gaps = 76/435 (17%)
Query: 206 RSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDV 265
R RD E K RE+E D + RR E K + E E + +R TV + L ADERD+
Sbjct: 129 RHRDVEKKTREQENVVEDPEVVRRRELELKRRKEIE-EAQRADLTVLVINLSLSADERDI 187
Query: 266 YEFFS-RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS 324
YE FS AGKVRD++ + D S +SKG+ YVEFY SV A++++G L GQ + ++ S
Sbjct: 188 YELFSEHAGKVRDIQCVRDLRSGKSKGIAYVEFYTQESVIKALSMTGLDLKGQRIKIQSS 247
Query: 325 EAEKNLVQSNSSIA--GASGGGTGPYSGGARRLYVGNLHFNMT---EDQLRQVFEPFGTV 379
+AEKN + + A P++ +YVG L ++ E +L+Q+F PFGT+
Sbjct: 248 QAEKNRAAKAAKMLQQTAMDASDSPFT-----IYVGGLIGALSALNEVELKQLFSPFGTI 302
Query: 380 ELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLG 438
V++ D ETG KG+ F++F R +A+ A+N +I G+ IKV +
Sbjct: 303 IDVEIFRDPETGESKGYAFLKFRRSSEAKEAMNTMNGFDIGGQQIKVGYANLNTTDSKSR 362
Query: 439 ANTTGDFD----DDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPT 494
++ GD D DD+GGGL A ++ LM+KL R +TA P+
Sbjct: 363 LSSLGDVDIERLDDDGGGLISGATNKIALMEKLQR-----------------TTAAPISA 405
Query: 495 APLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFD 554
G AS PT+++ +L NMF
Sbjct: 406 TFSSGKASG--------------------------PTSNI-------------ILSNMFT 426
Query: 555 PKNETYEE--FDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRAL 611
+ +E F ++I+EDV+ EC K+GK+ +++ K + G V+++F+N+ A A + L
Sbjct: 427 ANDPGADEPNFFVEIEEDVKEECEKYGKVVAVYLNKKTIDGKVWVKFQNSTDASTAYKGL 486
Query: 612 HGRWFAGKMITATFM 626
+GR+FAG I ++
Sbjct: 487 NGRYFAGNTIKVEYV 501
>gi|291403539|ref|XP_002718108.1| PREDICTED: RNA binding motif protein 23 isoform 1 [Oryctolagus
cuniculus]
Length = 410
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 129/188 (68%), Gaps = 10/188 (5%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RTV Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF D+ +VP
Sbjct: 130 ERDARTVLCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQAVP 189
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+AI L+GQ LLG P+MV+ S+AEKN + +++A G SGG RLYVG+LHFN+
Sbjct: 190 LAIGLTGQRLLGVPIMVQASQAEKNRL---AAMANNLQKG----SGGPLRLYVGSLHFNI 242
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRA 422
TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E R AL LNG E+ GR
Sbjct: 243 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLNG-FELAGRP 301
Query: 423 IKVSAVTD 430
++V VT+
Sbjct: 302 MRVGHVTE 309
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 203/412 (49%), Gaps = 50/412 (12%)
Query: 228 SRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSR 287
+R KE E+V P V + +++ DR S
Sbjct: 202 TRELKEFFEKVGP----------------------------------VAEAQIVKDRVSN 227
Query: 288 RSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGP 347
RSKGVGYVEF + SV A+ L+GQ LLG PV+V+P+EAEKN N+ +G P
Sbjct: 228 RSKGVGYVEFKNEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNTESSGH------P 281
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDAR 407
S RLYVGN+HF++TE L+ VFEPFG +E VQL D++G +G+GFVQF AR
Sbjct: 282 NSVPFHRLYVGNIHFSITETDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDAGQAR 341
Query: 408 NALNLNGQLEIVGRAIKVSAVTDQ---SGLQDLGANTTGDFDDDEGGGLSLNARSRALLM 464
AL ++ GR I+V D+ +L G +G S A R +
Sbjct: 342 EALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLRGFQGQNQQYQGSAFS-GAGGRGPQV 400
Query: 465 QKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLG 524
DR+G + G+ + A++ T + A + + L+ L + PT+
Sbjct: 401 SNFDRAGGRDSDKGTGAS-ALDDTDV----AGVNFNNYSRDALMRKLARTDEPTNGQPER 455
Query: 525 TALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDI-KEDVEGECSKFGKLKH 583
L+ T + P+ + + S C++L NMFDP + E++ ++ +E + K+G + H
Sbjct: 456 QILKPKTETKPMPVNVSMASRCVVLHNMFDPAEQEGEDWAKELEEEVRQEAEEKYGHVVH 515
Query: 584 IFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
I V+ +S G +YL+F+ Q A + L+GR+F G+MI+A +V Y + F
Sbjct: 516 IAVDTNSQGDIYLKFDKVQGGENAIKGLNGRYFDGRMISAAPVVDAVYSSLF 567
>gi|426376374|ref|XP_004054976.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Gorilla
gorilla gorilla]
Length = 403
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 178/330 (53%), Gaps = 51/330 (15%)
Query: 233 EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 292
E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 119 EPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGI 175
Query: 293 GYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA 352
YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG
Sbjct: 176 AYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGGP 228
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL- 410
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR AL
Sbjct: 229 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 288
Query: 411 NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
LNG E+ GR ++V VT++ D G + T GD + D G +A R LM KL
Sbjct: 289 QLNG-FELAGRPMRVGHVTER---LDGGTDITFPDGDQELDLG-----SAGGRLQLMAKL 339
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTAL 527
+ A + AL L A LGA +
Sbjct: 340 AEGAGIQLPTTATAAAAAQAAALQLNGAVPLGALN------------------------- 374
Query: 528 QVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
P A + + + S+C L ++F P+
Sbjct: 375 --PAALTALSPALNLASQCFQLSSLFTPQT 402
>gi|24582417|ref|NP_723245.1| CG11266, isoform C [Drosophila melanogaster]
gi|24582419|ref|NP_723246.1| CG11266, isoform D [Drosophila melanogaster]
gi|24582421|ref|NP_723247.1| CG11266, isoform F [Drosophila melanogaster]
gi|24582423|ref|NP_723248.1| CG11266, isoform G [Drosophila melanogaster]
gi|45550943|ref|NP_723244.2| CG11266, isoform E [Drosophila melanogaster]
gi|22945836|gb|AAN10616.1| CG11266, isoform C [Drosophila melanogaster]
gi|22945837|gb|AAN10617.1| CG11266, isoform D [Drosophila melanogaster]
gi|22945838|gb|AAN10618.1| CG11266, isoform F [Drosophila melanogaster]
gi|22945839|gb|AAN10619.1| CG11266, isoform G [Drosophila melanogaster]
gi|45445036|gb|AAN10615.2| CG11266, isoform E [Drosophila melanogaster]
Length = 287
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 126/324 (38%), Positives = 174/324 (53%), Gaps = 56/324 (17%)
Query: 320 MVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTV 379
MV+ ++AEKN +Q N++ A TGP RLYVG+LHFN+TED LR +FEPFG +
Sbjct: 1 MVQHTQAEKNRLQ-NAAPAFQPKSHTGP-----MRLYVGSLHFNITEDMLRGIFEPFGKI 54
Query: 380 ELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDL 437
+ +QL +D ETG KG+GF+ + +DA+ AL LNG E+ GR +KV VT++ L
Sbjct: 55 DAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRLMKVGNVTER-----L 108
Query: 438 GANTTG-DFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAP 496
NTT D D+ + G+ L A R LM KL AG AV A + L P
Sbjct: 109 DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEG------AGLAVPQAAANALLATAPQP 162
Query: 497 LLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPK 556
PL Q V P+ + ++C +L NMFDP+
Sbjct: 163 ------------APLQQQEV------------APS----------IATQCFILSNMFDPR 188
Query: 557 NETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRW 615
ET +D++I++DV EC+K G + HI V+ S G VY++ +T +A A ALHGRW
Sbjct: 189 TETNPTWDVEIRDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGRW 248
Query: 616 FAGKMITATFMVPQTYEAKFPDSI 639
FAG++ITA ++ Y FPDSI
Sbjct: 249 FAGRVITAAYVPVINYHTMFPDSI 272
>gi|327289313|ref|XP_003229369.1| PREDICTED: probable RNA-binding protein 23-like [Anolis
carolinensis]
Length = 445
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 155/241 (64%), Gaps = 19/241 (7%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 155 REPLGSLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 211
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 212 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 264
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNAL 410
RLYVG+LH N+T++ LR +FEPFG ++ + L D+ TG KG+GF+ F+ E AR AL
Sbjct: 265 PMRLYVGSLHCNITKEMLRGIFEPFGKIDSIVLMRDQDTGQSKGYGFITFSEAECARRAL 324
Query: 411 -NLNGQLEIVGRAIKVSAVTDQ-SGLQDLGANTTGDFDDD-EGGGLSLNARSRAL-LMQK 466
LNG E+ GR ++V VT++ G D+ T D +D+ + GL+L A L LM K
Sbjct: 325 EQLNG-FELAGRPMRVGQVTERLDGTTDI---TFPDGNDEPDRSGLNLGATGSQLQLMAK 380
Query: 467 L 467
L
Sbjct: 381 L 381
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 134/200 (67%), Gaps = 14/200 (7%)
Query: 238 VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+ YVEF
Sbjct: 35 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEF 91
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN---LVQSNSSIAGASGGGTGPYSGGARR 354
DV SVP+A+ L+GQ L G P++V+P++AE+N +++S + G GP R
Sbjct: 92 QDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQSASTSSSTLQRGNIGPM-----R 146
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NL 412
LYVG+LHFN+TED L+ +FEPFG ++ ++L D ET KG+GF+ F EDA+ AL L
Sbjct: 147 LYVGSLHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQL 206
Query: 413 NGQLEIVGRAIKVSAVTDQS 432
NG E+ GR +KV VT+++
Sbjct: 207 NG-FELAGRPMKVGHVTERT 225
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 211/430 (49%), Gaps = 89/430 (20%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
+RD TV + LKADERD+YEFFS AGKVRD++ I D+ S +SKGV YVEFY SV
Sbjct: 151 KRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESV 210
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLH-- 361
A++++G L +P+ V+ S+AEKN A A+ + +LY+G L
Sbjct: 211 IKALSVNGYMLKNRPIKVQSSQAEKNRA------AKATKHHPIDPNDIPLKLYIGGLLGP 264
Query: 362 -FNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
N+TE +L+Q+F PFG + V++ D TG KGFGF+QF + +A A+ + +E+
Sbjct: 265 LSNITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVA 324
Query: 420 GRAIKVSAVTDQS------GLQDLG-----------------ANTTGDFDDDE------- 449
GR IKVS D L+DL AN + D+++
Sbjct: 325 GREIKVSYAQDSKYLLATDALKDLNIPNLNQIKAAAQGVQKSANKEEEQDNEKIDNDDDD 384
Query: 450 GGGLSLNARSRALLMQKLDRSGSATTIAGSAV--TPAVNSTALPLPTAPLLGAASAVSTL 507
GGGL A S+ LMQKL R TI +++ T A+ + A+ A ++++ +
Sbjct: 385 GGGLITGASSKIALMQKLQRD----TIIDASIPNTYAIGTNAI---------ARNSLNNV 431
Query: 508 VPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETY---EEFD 564
PL T ++L NMF P + +F
Sbjct: 432 SSPLNNVT-----------------------------SNIVLCNMFSPNDSNIGSDPDFF 462
Query: 565 MDIKEDVEGECSKFGKLKHIFVE-KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITA 623
DI EDV ECSK+G + I++ K+ G +Y+++ + A + L+GR+F G +I A
Sbjct: 463 SDIIEDVREECSKYGNIIKIWLNTKNIDGKIYIKYTKNDESLKAFQCLNGRYFGGSLINA 522
Query: 624 TFMVPQTYEA 633
F+ T+E+
Sbjct: 523 YFISNATWES 532
>gi|356514806|ref|XP_003526094.1| PREDICTED: uncharacterized protein LOC100782991 [Glycine max]
Length = 390
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 118/200 (59%), Gaps = 54/200 (27%)
Query: 227 ESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------ 280
+ RR ++KKE EPE DPERDQRTVFAYQ+ LKA ERDVYEFFS+AGK + +L
Sbjct: 96 DGRRFRDKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKNVECKLGFAKFC 155
Query: 281 -----------------IM-----------DRNSR-------RSKGVG-----------Y 294
IM D N + + G+ Y
Sbjct: 156 GINAVGLSRGRKSLLKPIMAKEDHGASLIDDGNPKCQGHQVNKPNGINPSTALSAQPDLY 215
Query: 295 VEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARR 354
+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQSN+S G + G TG Y R+
Sbjct: 216 IEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNAS--GGAAGVTGSYGAVDRK 273
Query: 355 LYVGNLHFNMTEDQLRQVFE 374
LYVGNLHFNMTE QLR+ F
Sbjct: 274 LYVGNLHFNMTESQLREFFH 293
>gi|403264879|ref|XP_003924694.1| PREDICTED: probable RNA-binding protein 23 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/248 (43%), Positives = 149/248 (60%), Gaps = 14/248 (5%)
Query: 181 ERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKKEQVE 239
R RS DR E RSRD +R R R L + S+ + P +E + +
Sbjct: 100 HRSRSWDRRHSE-SRSRDHRREDRVRYRSPPLPTGHRYGHSKSPHFREKSPVREPIDNLS 158
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF +
Sbjct: 159 PE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCE 215
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
+ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A GT GG RLYVG+
Sbjct: 216 IQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKGT----GGPMRLYVGS 268
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA-LNLNGQLE 417
LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ L+ N+ L +
Sbjct: 269 LHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITVNNLDTYTNSRLGIVYTKV 328
Query: 418 IVGRAIKV 425
++G I++
Sbjct: 329 LLGSGIQL 336
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 207/463 (44%), Gaps = 106/463 (22%)
Query: 223 DNDKESRRPKEKKEQVEPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
D + +RRP+ EPEV + +RD+RT+F QI +A+ + FF R G V + +++
Sbjct: 153 DERRTTRRPQTP---AEPEVTEDDRDKRTIFVQQISQRAETHHLRTFFERVGPVIEAQIV 209
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
DR + RSKGVGYVEF D SV A+ L+GQ L G P++ + +EAEKN S A
Sbjct: 210 KDRVTLRSKGVGYVEFKDEESVAKALELTGQKLKGVPIIAQLAEAEKNRAARPSEGGAAP 269
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDET--GHCKGFGFVQ 399
G P+ RLYVGN+HF++TE LR +FEPFG +E V L DE G KG+GFVQ
Sbjct: 270 GANGAPF----HRLYVGNIHFSVTEGDLRDIFEPFGALEQVILQRDEANPGRSKGYGFVQ 325
Query: 400 FARLEDARNALNLNGQLEIVGRAIKVSAVTDQ---------------------------- 431
F A+NAL E+ GR I+V D+
Sbjct: 326 FVDPAHAKNALAEMNGFELAGRQIRVGLGNDKFTPESTANLLRTFSQQAQSYQGSAFSGA 385
Query: 432 -----------------SGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSAT 474
D G + DD + G++ R+ LM L R +
Sbjct: 386 GGRGAYAGGSGGNFDRTHAKDDRGVSGASALDDTDVAGVNYKTYDRSKLMDALARRDNGE 445
Query: 475 TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASV 534
G+ P +N P AP++ P AS
Sbjct: 446 PARGA--QPVINK-----PRAPIVDK-----------------------------PMAS- 468
Query: 535 PIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKE---DVEGEC-SKFGKLKHIFVEKDS 590
+C+ ++N FD E + +KE +V+ EC K+GK+ HI V+ +S
Sbjct: 469 ----------KCVKIENAFDADEEQRMIGNNWVKELEVEVKAECEKKYGKVVHIAVDTNS 518
Query: 591 AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
G ++++F++ A + L+GR F + I A+++V + Y +
Sbjct: 519 DGEIFVKFDSVTGGEKALQGLNGRSFNNRRIRASYVVDKIYNS 561
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 163/294 (55%), Gaps = 29/294 (9%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDAR 407
S G RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+
Sbjct: 154 SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAK 213
Query: 408 NAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQK 466
AL LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +
Sbjct: 214 KALEQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMAR 270
Query: 467 LDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTA 526
L G + PA AL + + GA + + T L Q T + +
Sbjct: 271 LAEG------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASV 320
Query: 527 LQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFV 586
+ T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V
Sbjct: 321 QPLAT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV 367
Query: 587 EKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+K+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 368 DKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 421
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 223/464 (48%), Gaps = 50/464 (10%)
Query: 204 RERSRDRELKERE--KERESRDNDKESRRPKEKKEQVEPEV-DPERDQRTVFAYQICLKA 260
R+R+ DR + R +R+ R N + RR K EPEV + +RD+RT+F QI +A
Sbjct: 134 RDRADDRFTRNRSPVSQRDRRRNGADDRRLSRKTP--EPEVTEDDRDKRTIFVQQISQRA 191
Query: 261 DERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVM 320
+ R + FF G V + +++ DR + RSKGVGYVEF + SVP A+ L+GQ L G P++
Sbjct: 192 ETRHLRSFFETVGPVVEAQIVKDRVTGRSKGVGYVEFKEEESVPKALELTGQKLKGVPII 251
Query: 321 VKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVE 380
+ +EAEKN S A G P+ RLYVGN+HF++TE L+++FEP+G +E
Sbjct: 252 AQLTEAEKNRAARPSEGGAAPGANGAPF----HRLYVGNIHFSVTEKDLQEIFEPYGELE 307
Query: 381 LVQLPLDET--GHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ---SGLQ 435
V L DE G KG+GFVQF A++AL E+ GR I+V D+
Sbjct: 308 QVILQRDELNPGRSKGYGFVQFVDPTHAKDALAEMNGFELAGRQIRVGLGNDKFTPESTA 367
Query: 436 DLGANTTGDFDDDEGGGLSLNARSRALLMQK---LDRSGSAT--TIAGSAVTPAVNSTAL 490
+L T +G S A DR+ S ++G++ + +
Sbjct: 368 NLLRTFTQQAQSYQGSAFSGAGGRGAYAGGSGGIFDRTHSKDDRGVSGASALDDTDVAGV 427
Query: 491 PLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLK 550
T S L+ L + P + G V VP+ D + S+C+ ++
Sbjct: 428 NFKTYDR-------SKLMDALARRDGP-EVAKHGAQPVVSKPRVPVVDRMA--SKCIKIE 477
Query: 551 NMFDPKNETYEEFDMDIKED--------------------VEGEC-SKFGKLKHIFVEKD 589
N FD F ++ D V+ EC K+G++ HI V+ +
Sbjct: 478 NAFDADQYFARSFRTALQADDSSREQAAFGPNWIKGLETEVKAECDKKYGRVVHIAVDPN 537
Query: 590 SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
+ G +Y++F++ A + L+GR F ++I A+++V + Y +
Sbjct: 538 TDGDIYVKFDSVTGGEKALQGLNGRNFNHRVIRASYVVDKIYNS 581
>gi|21739702|emb|CAD38887.1| hypothetical protein [Homo sapiens]
gi|119586632|gb|EAW66228.1| RNA binding motif protein 23, isoform CRA_g [Homo sapiens]
Length = 319
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 137/226 (60%), Gaps = 12/226 (5%)
Query: 177 REVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKK 235
R+ R RS DR RSRD +R R L + S+ + P +E
Sbjct: 96 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPV 155
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
+ + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YV
Sbjct: 156 DNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYV 212
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG RL
Sbjct: 213 EFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----NGGPMRL 265
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
YVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+
Sbjct: 266 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITL 311
>gi|300123623|emb|CBK24895.2| unnamed protein product [Blastocystis hominis]
Length = 465
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 194/403 (48%), Gaps = 68/403 (16%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
RD RTVF + +K DE+ + +F +AG V+ ++LI DR S RSKG+GY+E
Sbjct: 106 RDIRTVFVSDLQVKVDEKWLRHYFEQAGTVKSIKLIRDRYSNRSKGMGYIEMATQEDAAK 165
Query: 306 AIALSGQPLL---------GQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLY 356
A+ L+GQ + G P+ VK SEAEKN S++ + P + +
Sbjct: 166 ALMLNGQKMCTKHKACNCSGFPMKVKRSEAEKNW----SAMKERAPPKIQPST-----IR 216
Query: 357 VGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDA-RNALNLNGQ 415
V NLH +T L ++FE FG V+ V + LDE KG ++F R E A R A ++GQ
Sbjct: 217 VCNLHPQLTRPNLIELFEAFGDVDNVTMDLDEHKQFKGSANIKFRRPESASRAATRMDGQ 276
Query: 416 LEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATT 475
+ R + V LQ G N ++D E + L+ R+L+M+ + + + T
Sbjct: 277 V-YFDRKLSVQL------LQRSGRNWK--YEDRE-DNIILDPSRRSLMMRHIAENKNDPT 326
Query: 476 IAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVP 535
+ + + N + P GAA P ++G
Sbjct: 327 LLDT-MNQVNNRGQIANPA----GAAK-------PTIEGNA------------------- 355
Query: 536 IFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVY 595
S CL+L NMF+ E +D+DI+EDV EC K+G + H FV+K+S+G VY
Sbjct: 356 --------SNCLVLHNMFNSAIEQGPHWDIDIQEDVRTECQKYGAILHCFVDKNSSGDVY 407
Query: 596 LRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
L F+N S A ++GRW+ G+++ ++M Y +FPD+
Sbjct: 408 LMFDNMNSCQNAANDMNGRWYDGRVVQVSYMPSGEYVNRFPDT 450
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 139/225 (61%), Gaps = 9/225 (4%)
Query: 249 RTVFAYQICLKADERDVYEFFSRA---GKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
R+VF Q+ + RD+ FF G VRD R++ DR SRRSKG+GYVE + V
Sbjct: 249 RSVFVSQLAARLTARDLGYFFEDKLGEGAVRDARIVTDRISRRSKGIGYVELRSIDLVTK 308
Query: 306 AIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMT 365
A+ LSG ++G P+MV+ +EAE+N V + ++ G + P GGA +LYVG+LHFN+T
Sbjct: 309 ALDLSGTIVMGLPIMVQLTEAERNRVHAGENL-NLPPGVSAP-QGGAMQLYVGSLHFNLT 366
Query: 366 EDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
E ++QVFEPFG ++ V L D TG KG+ FVQ+ R EDA+ AL E+ GR ++
Sbjct: 367 EQDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMALEQMDGFELAGRTLR 426
Query: 425 VSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
V++V ++ + TT D +D GGG +LNA SR LMQKL R
Sbjct: 427 VNSVNEKG--VAVRNTTTIDSLEDSGGG-NLNAASRQALMQKLAR 468
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 546 CLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSA 604
+LL NMFDP ET ++D D+ +DV+GEC SK+G + + +EKDS G +Y++FE+ SA
Sbjct: 491 SVLLLNMFDPDEETEPDWDKDLADDVKGECASKYGPVTALKIEKDSQGEIYVQFESVDSA 550
Query: 605 FAAQRALHGRWFAGKMITATFMVPQTYEA 633
A +L+GRWF G+ + A F+ +A
Sbjct: 551 KKAVDSLNGRWFGGRQVNARFISDAIMQA 579
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 141/450 (31%), Positives = 201/450 (44%), Gaps = 131/450 (29%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P +++ PE ERD RTVF Q+ + RD+ EFFS GKV+DVRLI +RR K
Sbjct: 155 PLGINDELTPE---ERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFK 211
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
G+ YVEF D SV +A+ LSGQ LLG P++V+ ++AEKN + NS G TGP
Sbjct: 212 GIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM-- 268
Query: 351 GARRLYVGNLHFN---------------------------------------MTEDQLRQ 371
RLYVG+LHFN
Sbjct: 269 ---RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFR-------- 317
Query: 372 VFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTD 430
+DA+ AL LNG E+ GR +KV VT+
Sbjct: 318 ------------------------------NADDAKKALEQLNG-FELAGRPMKVGNVTE 346
Query: 431 QSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTAL 490
++ L + + D D+ + G+ L A R LM KL T L
Sbjct: 347 RTDL--IQGPSLLDTDELDRSGIDLGATGRLQLMFKL-----------------AEGTGL 387
Query: 491 PLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLK 550
+P A AA+A L A + P + ++C +L
Sbjct: 388 EIPPA----AANA-------------------LNMAPVMTQPQPPPQAAPPIATQCFMLS 424
Query: 551 NMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQR 609
NMFDP+NET + +I++DV EC+K G + H++V++ S G VY++ + +A AA
Sbjct: 425 NMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVN 484
Query: 610 ALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+LHGRWFAG++ITA ++ Y + FPD++
Sbjct: 485 SLHGRWFAGRVITAAYVPVVNYHSLFPDAM 514
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 210/451 (46%), Gaps = 69/451 (15%)
Query: 200 EVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLK 259
EV E +RD+RT+F QI +
Sbjct: 166 EVTE----------------------------------------DDRDKRTIFVQQISQR 185
Query: 260 ADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPV 319
A+ R + FF R G V + +++ DR + RSKGVGYVEF D SVP A+ L+GQ L G P+
Sbjct: 186 AETRHLRAFFERVGPVVEAQIVKDRVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPI 245
Query: 320 MVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTV 379
+ + +EAEKN S A G P+ RLYVGN+HF++TE L+++FEPFG +
Sbjct: 246 IAQLTEAEKNRAARPSEGGAAPGANGAPF----HRLYVGNIHFSVTEKDLQEIFEPFGEL 301
Query: 380 ELVQLPLDET--GHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDL 437
E V L DE G KG+GFVQF A+NAL E+ GR I+V D+ +
Sbjct: 302 EQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEMNGFELAGRQIRVGLGNDKFTPEST 361
Query: 438 GANTTGDFDDD----EGGGLSLNARSRALLMQK---LDRSGSAT--TIAGSAVTPAVNST 488
AN F +G S A DR+ S ++G++ +
Sbjct: 362 -ANLLRTFSQQAQSYQGSAFSGAGGRGAYAGGSGGVFDRTHSKDDRGVSGASALDDTDVA 420
Query: 489 ALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLL 548
+ T S L+ L + P P + G V VP+ D + S+C+
Sbjct: 421 GVNFKTYDR-------SKLMDALARRDNP-EPTKQGAQPVVSKPRVPVVDK-PMASKCIK 471
Query: 549 LKNMFDPKNETYEEFD---MDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSA 604
++N FDP E D D++ +V+ EC K+GK+ HI V+ +S G ++++F++
Sbjct: 472 IENAFDPDEEQRNWGDNWVKDLELEVKSECDKKYGKVVHIAVDTNSEGDIFVKFDSVSGG 531
Query: 605 FAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
A + L+GR F + I A+++V + Y + +
Sbjct: 532 EKALQGLNGRNFNHRTIRASYVVDKIYNSLW 562
>gi|169599154|ref|XP_001793000.1| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
gi|160704547|gb|EAT90605.2| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
Length = 544
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/415 (32%), Positives = 202/415 (48%), Gaps = 36/415 (8%)
Query: 238 VEPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVE 296
V PEV + +RD+RT+F QI +A + FF G V + +++ DR + RSKGVGYVE
Sbjct: 138 VSPEVTEDDRDKRTIFVQQISQRALTHHLLAFFETVGPVIEAQIVKDRVTGRSKGVGYVE 197
Query: 297 FYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLY 356
F D SV A+ L+GQ L G P++ + +EAEKN S A G P+ RLY
Sbjct: 198 FKDEESVAKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPF----HRLY 253
Query: 357 VGNLHFNMTEDQLRQVFEPFGTVELVQLPLDET--GHCKGFGFVQFARLEDARNALNLNG 414
VGN+HF++TE L +F PFG +E V L DET KG+GFVQF A+ AL
Sbjct: 254 VGNIHFSVTEQDLHTIFAPFGELEQVTLQRDETNPARSKGYGFVQFVDPTKAKEALAEMN 313
Query: 415 QLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDD----EGGGLSLNARSRALLMQK---L 467
E+ GR I+V D+ + A+ F+ +G S A
Sbjct: 314 GFELAGRQIRVGLGNDKFTPEST-ASLLRTFNQQAQSYQGSAFSGAGGRGAYAGGTGGVF 372
Query: 468 DRSGSAT--TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGT 525
DR+ S ++G++ + + T S L+ L + P Q+
Sbjct: 373 DRTHSKDDRGVSGASALDDSDVAGVNFKTYDR-------SKLMNALARRDGPEAAAQIAR 425
Query: 526 ALQVPTASVPIFDTIGVP--SECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-----SKF 578
P S P + P S+C+ ++N FD E ++F +D+EGE K+
Sbjct: 426 ----PVVSKPRDPIVDKPMASKCIKIENAFDADQE-LQQFGPSWVKDLEGEVKLECDKKY 480
Query: 579 GKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
GK+ HI VE +S G VY++F++ A R L+GR F ++I A+++V + Y +
Sbjct: 481 GKVVHIAVEPNSEGDVYVKFDSVTGGEKALRGLNGRNFNHRVIRASYVVDKIYNS 535
>gi|193785067|dbj|BAG54220.1| unnamed protein product [Homo sapiens]
Length = 319
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 136/226 (60%), Gaps = 12/226 (5%)
Query: 177 REVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRP-KEKK 235
R+ R RS DR RSRD +R R L + S+ + P +E
Sbjct: 96 RQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPV 155
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
+ + PE ERD RTVF Q+ + RD+ +FFS GKVRDV +I DRNSRRSKG+ YV
Sbjct: 156 DNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVCIISDRNSRRSKGIAYV 212
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRL 355
EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G +GG RL
Sbjct: 213 EFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANDLQKG----NGGPMRL 265
Query: 356 YVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
YVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+
Sbjct: 266 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITL 311
>gi|441667161|ref|XP_004091953.1| PREDICTED: probable RNA-binding protein 23 [Nomascus leucogenys]
Length = 319
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 117/170 (68%), Gaps = 11/170 (6%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 152 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A G SGG
Sbjct: 209 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKG----SGG 261
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+
Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITL 311
>gi|221044666|dbj|BAH14010.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 169/311 (54%), Gaps = 49/311 (15%)
Query: 254 YQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQP 313
Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF ++ SVP+AI L+GQ
Sbjct: 1 MQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQR 60
Query: 314 LLGQPVMVKPSEAEKN--LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQ 371
LLG P++V+ S+AEKN +N+ G +GG RLYVG+LHFN+TED LR
Sbjct: 61 LLGVPIIVQASQAEKNRLAAMANNLQKG---------NGGPMRLYVGSLHFNITEDMLRG 111
Query: 372 VFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVT 429
+FEPFG ++ + L D +TG KG+GF+ F+ E AR AL LNG E+ GR ++V VT
Sbjct: 112 IFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVT 170
Query: 430 DQSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVN 486
++ D G + T GD + D G +A R LM KL
Sbjct: 171 ER---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL-----------------AE 205
Query: 487 STALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSEC 546
+ LP+ AA+A + + G VP G L P A + + + S+C
Sbjct: 206 GAGIQLPSTAAAAAAAAAAQAAALQLNGAVPL--GALN-----PAALTALSPALNLASQC 258
Query: 547 LLLKNMFDPKN 557
L L ++F P+
Sbjct: 259 LQLSSLFTPQT 269
>gi|119586631|gb|EAW66227.1| RNA binding motif protein 23, isoform CRA_f [Homo sapiens]
Length = 269
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 139/220 (63%), Gaps = 25/220 (11%)
Query: 255 QICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YVEF ++ SVP+AI L+GQ L
Sbjct: 2 QLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRL 61
Query: 315 LGQPVMVKPSEAEKN--LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQV 372
LG P++V+ S+AEKN +N+ G +GG RLYVG+LHFN+TED LR +
Sbjct: 62 LGVPIIVQASQAEKNRLAAMANNLQKG---------NGGPMRLYVGSLHFNITEDMLRGI 112
Query: 373 FEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTD 430
FEPFG ++ + L D +TG KG+GF+ F+ E AR AL LNG E+ GR ++V VT+
Sbjct: 113 FEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTE 171
Query: 431 QSGLQDLGANTT---GDFDDDEGGGLSLNARSRALLMQKL 467
+ D G + T GD + D G +A R LM KL
Sbjct: 172 R---LDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 203
>gi|405120919|gb|AFR95689.1| RNA splicing factor Pad-1 [Cryptococcus neoformans var. grubii H99]
Length = 588
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 180/381 (47%), Gaps = 91/381 (23%)
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN-----LVQSNSSIAGA-SGGGT 345
+GYVE V V A+ALSG ++G P+ + +EAE+N L+ + + + A S GG
Sbjct: 262 IGYVELDSVDLVNKALALSGTVVMGIPINIMLTEAERNHSGTELITATALASNARSHGGG 321
Query: 346 G-----------PYSGGA------------------RRLYVGNLHFNMTEDQLRQVFEPF 376
G P S G RL+V NL F++T D +RQVFEPF
Sbjct: 322 GRSSVPFTQNYPPLSTGLDLPPGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPF 381
Query: 377 GTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQD 436
G +E V L +D +G KG +VQF ++ A+ AL+ ++ GR IKV + Q+
Sbjct: 382 GEIEFVDLHMDLSGLRKGTAYVQFKDVKSAQMALDAMAGFDLAGRLIKVQTI------QE 435
Query: 437 LGANTTGDFDDDEGG-GLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTA 495
G T D +D G G L+A R LM KL R+ ++ SA P +N +
Sbjct: 436 RGTYQTPDLIEDSGNYGTRLDANQRQQLMFKLARTEPNVNLSLSA--PRINDS------- 486
Query: 496 PLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDP 555
+ VP D P+ +++ NMF+P
Sbjct: 487 -----------------------------------QSKVPAMD----PTPRIVVHNMFNP 507
Query: 556 KNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGR 614
+ ET +D+D+ EDV+GE SK+G++K I VEK SAG VY+ F +T SA A + L+GR
Sbjct: 508 EEETERNWDLDLAEDVKGEVESKYGRVKRIKVEKMSAGEVYIEFIDTDSAIKAVKGLNGR 567
Query: 615 WFAGKMITATFMVPQTYEAKF 635
+F G+ + A ++ + A
Sbjct: 568 FFGGRQLQAGYITEALFNAHL 588
>gi|145494510|ref|XP_001433249.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400366|emb|CAK65852.1| unnamed protein product [Paramecium tetraurelia]
Length = 535
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 212/446 (47%), Gaps = 75/446 (16%)
Query: 213 KEREKERESRDNDKESRRPKEKKEQVEPEVD-PERDQRTVFAYQICLKADERDVYEFFS- 270
+E K+R+ + E R + K +VE E++ R TV Y + LKA E+ +Y+FF
Sbjct: 123 REIAKQRKIEIMEAEIRELERKIVEVERELEEAHRQDLTVLMYCLPLKAKEKHIYQFFQT 182
Query: 271 -RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS-------GQPLLGQPVMVK 322
GK+RD+R+I D+ S RS+GV YVEFY S+PMA+AL+ GQ + PV ++
Sbjct: 183 FNCGKIRDIRIIRDQKSGRSRGVAYVEFYQEESIPMALALNDRLFIMDGQQVGTIPVKIQ 242
Query: 323 PSEAEKN--------------LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
S+AEKN +QS + +G +G A +L + E+
Sbjct: 243 LSQAEKNRAARDQKNMQIKQNKLQSIQDLQNMNGPARVQITGMAEQLQ------KINEED 296
Query: 369 LRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNL--NGQLEIVGRAIKVS 426
+R+ F PFGT++ V++P DE G G +V + + E ARN + + N Q + G+ IKV
Sbjct: 297 IREAFVPFGTIDTVEIPKDEQGRMTGVLYVTYEKAESARNMIEVINNQQFLLNGKPIKVQ 356
Query: 427 AVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVN 486
V+ + DL DDD L N R LM+KL ++
Sbjct: 357 LVSGANNYMDL------QLDDD----LVQNPVMRITLMKKLMDDN------------LID 394
Query: 487 STALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSEC 546
+ LP PL+ + ++Q P+ LG + +P+ P C
Sbjct: 395 NINLP----PLMSQLGLTVQRILNIIQSPNPS----LGCI----SGWMPLKHN---PPAC 439
Query: 547 ------LLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFEN 600
++L NM+ + + +++KE+VE EC K+G+++ ++V+K + G V + F+
Sbjct: 440 PCITKVIVLTNMWTDLEISNQAAIVELKEEVENECKKYGEIEMVWVDKKNEGNVIVVFKQ 499
Query: 601 TQSAFAAQRALHGRWFAGKMITATFM 626
++A ++ R F K++ + F+
Sbjct: 500 WEAAKQVNVLMNNRKFGNKVVQSYFI 525
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/252 (42%), Positives = 140/252 (55%), Gaps = 53/252 (21%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P +++ PE ERD RTVF Q+ + RD+ EFFS GKV+DVRLI +RR K
Sbjct: 154 PLGINDELTPE---ERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFK 210
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
G+ YVEF D SV +A+ LSGQ LLG P++V+ ++AEKN + NS G TGP
Sbjct: 211 GIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM-- 267
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA 409
RLYVG+LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ F +DA+ A
Sbjct: 268 ---RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKA 324
Query: 410 L-NLNGQLEIVGRAIKVSAVT-----------------DQSGLQDLGA------------ 439
L LNG E+ GR +KV VT D+SG+ DLGA
Sbjct: 325 LEQLNG-FELAGRPMKVGNVTERTDLIQGPSLLDTDELDRSGI-DLGATGRLQLMFKLAE 382
Query: 440 -----------N 440
N
Sbjct: 383 GTGLEIPPAAAN 394
>gi|145509627|ref|XP_001440752.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407980|emb|CAK73355.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 211/446 (47%), Gaps = 75/446 (16%)
Query: 213 KEREKERESRDNDKESRRPKEKKEQVEPEVD-PERDQRTVFAYQICLKADERDVYEFFS- 270
+E K+R+ + E R + K +VE E++ R TV Y + LKA E+ +Y+FF
Sbjct: 121 REIAKQRKIEIMEAEIRELERKIVEVERELEEAHRQDLTVLMYCLPLKAKEKHIYQFFQT 180
Query: 271 -RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS-------GQPLLGQPVMVK 322
GK+RD+R+I D+ S RS+GV YVEFY S+PMA+AL+ GQ + PV ++
Sbjct: 181 FNCGKIRDIRIIRDQKSGRSRGVAYVEFYQEESIPMALALNDRLFIMDGQQVGTIPVKIQ 240
Query: 323 PSEAEKN--------------LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
S+AEKN +QS + +G +G A +L + E+
Sbjct: 241 LSQAEKNRAARDQKNMQIKQNKLQSIQDLQNMNGPARVQITGMAEQLQ------KINEED 294
Query: 369 LRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNL--NGQLEIVGRAIKVS 426
+R+ F PFGT++ V++P DE G G +V + + E ARN + + N Q + G+ IKV
Sbjct: 295 IREAFVPFGTIDTVEIPKDEQGRMTGVLYVTYEKAESARNMIEVINNQQFLLNGKPIKVQ 354
Query: 427 AVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVN 486
V+ + DL DDD L N R LM+KL ++
Sbjct: 355 LVSGANNYMDL------QLDDD----LVQNPVMRITLMKKLMDDN------------LID 392
Query: 487 STALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSEC 546
+ LP PL+ + ++Q P+ LG + +P+ P C
Sbjct: 393 NINLP----PLMTQLGLTVQRILNIIQSPNPS----LGCI----SGWMPLKHN---PPAC 437
Query: 547 ------LLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFEN 600
++L NM+ + + +++KE+VE EC K+G ++ ++V+K + G V + F+
Sbjct: 438 PCITKVIVLTNMWTELEISNQAAIVELKEEVENECKKYGDVEMVWVDKKNEGNVIVVFKQ 497
Query: 601 TQSAFAAQRALHGRWFAGKMITATFM 626
++A ++ R F K++ + F+
Sbjct: 498 WEAAKQVNVLMNNRKFGNKVVQSYFI 523
>gi|213410431|ref|XP_002175985.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
gi|212004032|gb|EEB09692.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
Length = 540
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 179/354 (50%), Gaps = 32/354 (9%)
Query: 231 PKEKKEQVEPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRS 289
P+ ++ + P + ERD+RTVF Q+ + ++ EFF +AG VRD +++ DR + RS
Sbjct: 198 PQSRRRESSPHYSEEERDRRTVFVTQLANRLTTHELREFFEQAGAVRDAQIVRDRVTGRS 257
Query: 290 KGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYS 349
KGV YVEF SV +A+ LSG+ +LG PV+V+ +EAEKN S + P+
Sbjct: 258 KGVAYVEFRREDSVQVALTLSGKRILGIPVIVQLTEAEKNRKARELSEQNRALSAELPF- 316
Query: 350 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNA 409
RL VGN+HFN+T++ L+ +FEPFG +E V+L D+ KGFGF+QF AR A
Sbjct: 317 ---HRLCVGNIHFNITDEDLKAIFEPFGELEYVRLQRDDQNRSKGFGFIQFRDPLCARIA 373
Query: 410 LNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
L ++ GR ++V TD+ TT A ++++ D
Sbjct: 374 LEKMNGFDLAGRQLRVGLGTDK-----FATETT------------------ASMLRRFDS 410
Query: 470 SGSATTIAG-SAVTPAVNSTALPLPTAPLLGAASAVST-LVPPLVQGTVPTHPGQLGTAL 527
S S S TP++++++ L+ ++ + + P +L L
Sbjct: 411 SYSRYKHEHVSQPTPSISASSDEASHQRLVKSSDNLDEGNLSPSEDSRPAISRDELMKKL 470
Query: 528 QVPTASVPIFDTIG-VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFG 579
V D++ P+ C+LL+NMF+P+ ET + + ++ V EC K+G
Sbjct: 471 ARNEQIVSTDDSLSKPPTRCVLLQNMFNPEEETGDHWMEELALHVREECEEKYG 524
>gi|145513991|ref|XP_001442906.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410267|emb|CAK75509.1| unnamed protein product [Paramecium tetraurelia]
Length = 545
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 211/441 (47%), Gaps = 65/441 (14%)
Query: 213 KEREKERESRDNDKESRRPKEKKEQVEPEVD-PERDQRTVFAYQICLKADERDVYEFFS- 270
+E K+R+ + E R + K +VE E++ R TV Y + LKA E+ +Y+FF
Sbjct: 133 REIAKQRKIEIMEAEIRELERKIVEVERELEEAHRQDLTVLMYCLPLKAKEKHIYQFFQT 192
Query: 271 -RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS-------GQPLLGQPVMVK 322
GK+RD+R+I D+ S RS+GV YVEFY S+PMA+AL+ GQ + PV ++
Sbjct: 193 FNCGKIRDIRIIRDQKSGRSRGVAYVEFYQEESIPMALALNDRLFIMDGQQVGTIPVKIQ 252
Query: 323 PSEAEKN--------------LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
S+AEKN +Q+ + +G +G A +L + E+
Sbjct: 253 LSQAEKNRAARDQKNMQIKQNKLQNIQDLQNMNGPARVQITGMAEQLQ------RINEED 306
Query: 369 LRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNL--NGQLEIVGRAIKVS 426
+R+ F PFGT+E V++P DE+G G +V + + E ARN + + N + G+ IKV
Sbjct: 307 IREAFVPFGTIETVEIPKDESGRMTGVLYVTYEKAESARNMIEVINNQPFLLNGKPIKVQ 366
Query: 427 AVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL-DRSGSATTIAGSAVTPAV 485
V+ + DL DDD L N R LM+KL D S +
Sbjct: 367 LVSGANNYMDL------QLDDD----LVQNPVMRITLMKKLMDDS-------------LI 403
Query: 486 NSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSE 545
++ LP PL+ + ++Q PT G +P P ++
Sbjct: 404 DNINLP----PLMTQLGLTVQRILNIIQSPNPTLGCISGW---MPLKHNP--PACPCTTK 454
Query: 546 CLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAF 605
++L NM+ + + +++KE+VE EC K+G ++ ++V+K + G V + F+ ++A
Sbjct: 455 VIVLTNMWTDLEISNQAAIVELKEEVENECKKYGDVEMVWVDKKNEGNVIIVFKQWEAAK 514
Query: 606 AAQRALHGRWFAGKMITATFM 626
++ R F K++ + F+
Sbjct: 515 QVNVLMNNRKFGNKIVQSYFI 535
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 135/244 (55%), Gaps = 49/244 (20%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P +++ PE ERD RTVF Q+ + RD+ +FFS GKV+DVRLI +RR K
Sbjct: 156 PLGINDELTPE---ERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDVRLITCNKTRRFK 212
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
G+ YVEF D SV +A+ LSGQ LLG P++V+ ++AEKN + NS G TGP
Sbjct: 213 GIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRM-GNSMPNLMPKGQTGPM-- 269
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA 409
RLYVG+LHFN+TED LR +FEPFG ++ +QL +D ETG KG+GF+ F +DA+ A
Sbjct: 270 ---RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKA 326
Query: 410 L-NLNGQLEIVGRAIKVSAVTD-------------------------------------Q 431
L LNG E+ GR +KV VT+
Sbjct: 327 LEQLNG-FELAGRPMKVGNVTERTDLIQGPSLLDTDELDRSGIDLGATGRLQLMFKLAEG 385
Query: 432 SGLQ 435
+GL+
Sbjct: 386 TGLE 389
>gi|331242735|ref|XP_003334013.1| RNA-binding protein rsd1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 546
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 125/212 (58%), Gaps = 31/212 (14%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
E + R+VF Q+ + +R++++FF +AGKVRD RLI DR SRRSKGVGYVEF ++ SV
Sbjct: 286 EHEMRSVFVSQLSARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVGYVEFRELESV 345
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGG-------------------- 343
A+AL+G LLG PVMV+ +EAEKN ++ G
Sbjct: 346 QKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNVPPGFVATAPPPPVPRPYVAPKAR 405
Query: 344 --------GTGPYSGGA-RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCK 393
G GP + RLYVG+L+FN+T+D +RQVF+PFG +E V L D+ TG K
Sbjct: 406 GSAYELNRGPGPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSK 465
Query: 394 GFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
G+ FVQF + DA+NA+ ++ GRA++V
Sbjct: 466 GYAFVQFKNMHDAKNAMEKMNGFQLAGRALRV 497
>gi|296214508|ref|XP_002753659.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Callithrix
jacchus]
Length = 439
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 127/232 (54%), Gaps = 57/232 (24%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 151 REPIDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 207
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +++A GTG G
Sbjct: 208 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRL---AAMANNLQKGTG----G 260
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA- 409
RLYVG+LHFN+TED LR +FEPFG ++ + L D +TG KG+GF+ F+ E AR A
Sbjct: 261 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAM 320
Query: 410 ---------------------------------------------LNLNGQL 416
L L +L
Sbjct: 321 DQLNGFELAGRPMRVGHVTEQLDGGTDITFPDGDQELDLGSAGGCLQLMAKL 372
>gi|443695245|gb|ELT96187.1| hypothetical protein CAPTEDRAFT_148377 [Capitella teleta]
Length = 277
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 158/293 (53%), Gaps = 45/293 (15%)
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-N 411
RLYVG+LHFN+TE+ LR +F+PFG ++ ++L + ETG +G+GF+ F EDA+ AL
Sbjct: 2 RLYVGSLHFNITEEMLRGIFDPFGKIDDIKLMKNHETGRSQGYGFITFHTAEDAKKALEQ 61
Query: 412 LNGQLEIVGRAIKVSAVTDQSGLQDLGANTTG----DFDDDEGGGLSLNARSRALLMQKL 467
LNG E+ GR +KV VT++ G TTG D DD + G+ L A R LM KL
Sbjct: 62 LNG-FELAGRPMKVGHVTERLG------ETTGPSALDTDDMDRAGIDLGATGRLQLMAKL 114
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTAL 527
G+ I P V + AL + P H Q+ +A
Sbjct: 115 AE-GTGFEI------PQVAANALNMNGIP----------------------HSIQVESAA 145
Query: 528 QVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVE 587
A + ++C +L NMFDP E ++++I++DV EC+K G + HI+V+
Sbjct: 146 ACAAAIAA--SAPPIATQCFMLSNMFDPITEATTTWEIEIQDDVIEECNKHGGVLHIYVD 203
Query: 588 KDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
K S G VY++ + +A A+ ALHGR+FAGK+ITA ++ Y + FPDSI
Sbjct: 204 KASPQGNVYVKCPSISAAVASVNALHGRYFAGKVITAAYVPLPNYHSLFPDSI 256
>gi|223999617|ref|XP_002289481.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974689|gb|EED93018.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 821
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 216/460 (46%), Gaps = 49/460 (10%)
Query: 205 ERSRDRELKEREKERESR----DNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKA 260
+RS D + K R + +S +K++R E++ Q E + +DQRT+F Q+ +KA
Sbjct: 367 DRSGDSKKKGRSADEQSHRSGDGKNKKARSGGEREHQNEQVDELTKDQRTIFISQLVMKA 426
Query: 261 DERDVYEFFSRA------GKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL 314
+ERD+ +F R G VRDV L+ D+ + R KG YVE ++ V A+ SG+
Sbjct: 427 EERDIRRYFQRKILNGHRGCVRDVILLRDKRTGRHKGCAYVELANLSDVEKALDASGKTP 486
Query: 315 LGQ--PVMVKPS---EAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQL 369
Q P++VK S V+ +A A G ++++Y+GN+ +T+ QL
Sbjct: 487 DFQKFPILVKSSTLPSTPGGTVEGAVILAVAGGMTVDGKRVESQKVYLGNVDRMVTQAQL 546
Query: 370 RQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSA 427
+F FG +E V L +D TG +GF F+ + +DA A+ ++GQL + G+ +K
Sbjct: 547 YALFSQFGPLEKVLLQMDPTTGASRGFAFLSYRDPKDANLAIQTMSGQL-LAGKPLKTGW 605
Query: 428 VTDQSGLQDLGANTTGDFDDDE---------------GGGLSLNARSRALLMQKLDRSGS 472
QS + T + D G GL A+ A L G+
Sbjct: 606 ANQQSAAAGIVEVKTDEIPADANEKVEKANAALIQLTGTGLITVAQQGATAQALLSSGGA 665
Query: 473 ATTIAGSAVTPA--VNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVP 530
A + + PA V S A L GAA V + P V P+ + TAL P
Sbjct: 666 AAAL---GILPAQQVQSVAEAALEMALGGAAPNVQPV--PAV-AVAPS----VSTALIAP 715
Query: 531 TASVPIFDTIG---VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFV- 586
V +G PS+ +L+ NMFD ET ++ DIK D E EC+++GK+ + V
Sbjct: 716 APVVVDATVVGRSDNPSQHILVHNMFDKDEETEPNWENDIKLDFEEECAQYGKMTSVVVM 775
Query: 587 EKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
K+ G +Y FE+++ A + L GRWF + + F+
Sbjct: 776 SKEVGGKIYASFESSRDAMNCAKNLAGRWFDKRQLRVEFV 815
>gi|349804535|gb|AEQ17740.1| putative rna-binding region containing protein 2 isoform b isoform
15 [Hymenochirus curtipes]
Length = 258
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 99/140 (70%), Gaps = 7/140 (5%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ YVEF DV SV
Sbjct: 7 ERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVA 66
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+AI L+GQ +LG P++V+ S+AEKN +++A GT G RLYVG+LHFN+
Sbjct: 67 LAIGLTGQRVLGVPIVVQASQAEKN---RAAALANNLQKGT----AGPMRLYVGSLHFNI 119
Query: 365 TEDQLRQVFEPFGTVELVQL 384
TED LR +FEPFG +E +QL
Sbjct: 120 TEDMLRGIFEPFGRIESIQL 139
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 542 VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLR 597
+ ++C L NM +P+ E +D +IK+DV EC+K G + HI+V+K S G VY++
Sbjct: 201 IATQCFQLSNM-NPQ-EDEPGWDTEIKDDVIEECNKHGGVVHIYVDKSSPQGNVYVK 255
>gi|118357832|ref|XP_001012164.1| splicing factor, CC1-like family protein [Tetrahymena thermophila]
gi|89293931|gb|EAR91919.1| splicing factor, CC1-like family protein [Tetrahymena thermophila
SB210]
Length = 588
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 230/500 (46%), Gaps = 83/500 (16%)
Query: 163 RYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESR 222
R RS + +++ E E+ + + + +R +ER + REL E++ E
Sbjct: 117 RSRSSKKDKKHHHSSERKTEEKQSQEAISKSQETRQLTSVERIELKKREL---EQQIEKL 173
Query: 223 DNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSR---AGKVRDVR 279
+ D E D R+ TV YQ+ KA+E+D++ + ++ A KVRD++
Sbjct: 174 NKDAE---------------DAAREDLTVMIYQLPSKAEEKDIWRYLTKHCGASKVRDIK 218
Query: 280 LIMDRNSRRSKGVGYVEFYDVMSVPMAIA-------LSGQPLLGQPVMVKPSEAEKNLVQ 332
LI D+ +++SKGV Y EFY V A+A L G+ + V ++ S+AEKN
Sbjct: 219 LIRDQKTKKSKGVAYAEFYIKEDVDKALAADTKPFFLKGEEVPMSEVRIQHSQAEKN--- 275
Query: 333 SNSSIAG---------ASGGGTGPYSGGARRLYVGNLH---FNMTEDQLRQVFEPFGTVE 380
+++A A G +++VG L+ +M E L+ +F+ +G +E
Sbjct: 276 -RAALAAREIKRQRAEALKEQLAKLQEGPVKVFVGGLNGKLADMNEQDLKDIFQKYGDIE 334
Query: 381 LVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQ---SGLQDL 437
V+LP++ G C GFG++ F + DA A+ + ++ + I V+ V + +Q L
Sbjct: 335 SVELPVNAQGKCLGFGYLTFKKKSDAHEAIKMMNGFKLQDQKISVTPVAVNLSFAPVQPL 394
Query: 438 GANTTG--------DFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG--SAVTPAVNS 487
++ G D D +E +A + LM+KL S ++ G +A P VN
Sbjct: 395 FPSSLGGTQTQDNIDLDQNENKVFLHSAAKKLELMKKL-AGNSTLSVPGTETAAQPTVN- 452
Query: 488 TALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECL 547
T LP+P G A+ +P L P + PT+ +P+ +
Sbjct: 453 TPLPIP-----GIAN-----LPSLNIAQNPQIQNNFMAGNRPPTSL--------LPTNYI 494
Query: 548 LLKNMF---DPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVE-KDSAGFVYLRFENTQS 603
+L NMF D KN+ F D+KEDV EC K+G + +FV + G V++ F +
Sbjct: 495 VLVNMFAESDFKNDP--SFFADLKEDVSEECKKYGDVVEVFVAIRSPCGSVFVLFNDAVG 552
Query: 604 AFAAQRALHGRWFAGKMITA 623
A + + GR F G+ I++
Sbjct: 553 AVTCAKNMDGRMFNGRPISS 572
>gi|340508480|gb|EGR34174.1| splicing factor, putative [Ichthyophthirius multifiliis]
Length = 582
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 206/437 (47%), Gaps = 52/437 (11%)
Query: 229 RRPKEKKEQVE----PEVDPERDQRTVFAYQICLKADERDVYEFFSR---AGKVRDVRLI 281
R+ KE +EQ+E + R+ TV YQ+ KADE+D++++ + KVRD+++I
Sbjct: 158 RKKKELEEQIERLNKEAEEATREDLTVMIYQLPTKADEKDIWKYLVKHCGCTKVRDIKII 217
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLL--GQPV-----MVKPSEAEKNLV--- 331
D+ +++SKGV Y EFY V A+ +P + G+ V V+ S+AEKN
Sbjct: 218 RDQRTKKSKGVAYAEFYIQEDVQKALQADTKPFILKGEEVPNSETRVQHSQAEKNRAALA 277
Query: 332 --QSNSSIAGASGGGTGPYSGGARRLYVGNLH---FNMTEDQLRQVFEPFGTVELVQLPL 386
Q A A G +++VG L +MT+ LR +F+ +G +E V+LP
Sbjct: 278 AKQIKQQRAEALKEQLQKLQDGPVKVFVGGLTGKLASMTDTDLRDIFQQYGDIESVELPQ 337
Query: 387 DETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVS-------AVTDQSGLQDLGA 439
D G C GFG++ F++ +A A+N +I + I V+ A+ + L
Sbjct: 338 DVNGKCIGFGYIIFSKKSEAHEAINAMNNKKISDQQITVAPVSSLNPALAAHMPIIALSQ 397
Query: 440 NTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLG 499
D D +E A+SR LMQKL +G+ +I G + ++++ LP+P
Sbjct: 398 ENKVDLDQNENNIYLHTAQSRLQLMQKL--AGNNLSIPG--LDQSLSNGVLPIP------ 447
Query: 500 AASAVSTLVPPLVQGTVPTHPGQL--GTALQVPTASVPIFDTIGVPSECLLLKNMF-DPK 556
S ++P L P Q+ G L+ P S+ VP+ ++L NMF + +
Sbjct: 448 --GMNSNIIPSLNIANNPLLNNQITAGIHLKRPLLSL-------VPTPYVVLVNMFLEGE 498
Query: 557 NETYEEFDMDIKEDVEGECSKFGKLKHIFVE-KDSAGFVYLRFENTQSAFAAQRALHGRW 615
F D+KEDV EC KFG + + V K G V++ F N SA + + R
Sbjct: 499 GNGDSAFFADLKEDVAEECKKFGDVIQVIVAVKSPCGAVFVIFNNEISAVNCAKNMDMRL 558
Query: 616 FAGKMITATFMVPQTYE 632
F + I + +T +
Sbjct: 559 FNQRQINCYCISEETLQ 575
>gi|403222792|dbj|BAM40923.1| RNA splicing factor [Theileria orientalis strain Shintoku]
Length = 649
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 148/276 (53%), Gaps = 26/276 (9%)
Query: 216 EKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFS-RAGK 274
EK R R ++ E RR ++ +E +RD TV + + L DERD+YE FS AGK
Sbjct: 299 EKARLLRSSEIEKRRQRDIEE-------AQRDDLTVLVFNMSLSVDERDIYELFSEHAGK 351
Query: 275 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN----- 329
VRD++L+ D S RSKG+ YVEFY SV A++++G L GQ + V+ S+AEKN
Sbjct: 352 VRDIQLVRDSRSGRSKGIAYVEFYTQESVIKALSMNGMSLKGQGIRVQSSQAEKNRAARA 411
Query: 330 --LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD 387
+Q N A P + L VG L N++E L+Q+F PFG V V + +
Sbjct: 412 AKQLQEN-----ALKEADNPTTVMVSNL-VGVLS-NLSEGDLQQLFAPFGNVAEVAVARN 464
Query: 388 ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFD- 446
+ G KG+ +V+F R +AR ALN+ +I G+ IKVS VT + N GD D
Sbjct: 465 DLGLSKGYAYVRFKRWTEAREALNVMNGFDISGQPIKVSYVTSNKRGRGSRLNELGDLDI 524
Query: 447 ---DDEGGGLSLNARSRALLMQKLDRSGSATTIAGS 479
DDE GL + ++ LM+KL + +A I S
Sbjct: 525 ERLDDEEAGLISGSSNKIALMKKLQQRVNAANIVLS 560
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 542 VPSECLLLKNMFDPKNETY---EEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLR 597
V + ++L NM+ E Y +F +I++DV EC K+G++ +++ + G VY++
Sbjct: 552 VNAANIVLSNMYTS--EDYADNNDFFDEIEDDVREECKKYGEVVKVYLNRRKPDGKVYVK 609
Query: 598 FENTQSAFAAQRALHGRWFAGKMITATFM 626
F + A A ++L GR+FAG I ++
Sbjct: 610 FRSNTDAQTAHKSLQGRYFAGNTIQVGYL 638
>gi|313230893|emb|CBY18890.1| unnamed protein product [Oikopleura dioica]
Length = 492
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 187/418 (44%), Gaps = 81/418 (19%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RTV A Q+ E D+ +FFS G VR V+LI D +++G+ Y+EF V SVP
Sbjct: 126 ERDARTVIAMQLAHAIREFDLKDFFSSVGDVRAVKLIKDER-HKTQGLAYIEFKHVQSVP 184
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKN-----LVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
+A+ L+GQ +LG+ ++V ++A+KN L Q+ ++ A GTGPY ++ V
Sbjct: 185 LAMGLTGQRVLGRAIVVHHAQADKNRHSEKLEQAKKNLMKA---GTGPY-----KIRVDK 236
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEI 418
LH +TE+QL+ + EPFG VE VQ+ D TG G FV F E +A+ ++
Sbjct: 237 LHKTVTEEQLKMIMEPFGRVEKVQIIKDGFTGGSSGTAFVTFVDCEGGEDAIRHLHNFDL 296
Query: 419 VGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
GGL+L R L G A
Sbjct: 297 --------------------------------GGLNLILR--------LVAKGKAAREVE 316
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQG----TVPTHPGQLGTA-------- 526
++ P L + AP A V P +G V H TA
Sbjct: 317 NSHNPNAMKAMLGVTAAPQKKAIEGVQ-YTPVKSEGMQFFIVMNHDHNFSTAGSGYGNSK 375
Query: 527 ----LQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLK 582
L + PI ++C + N FD NE + D +K+DV S FG +
Sbjct: 376 AALRLMARRQAAPI------STQCFQIVNAFDV-NEKGKWQD-KVKKDVIQRVSNFGDVY 427
Query: 583 HIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
H+ V+++S AG V+++ + S +A +LHGR F G+ +TA ++ Y FP S+
Sbjct: 428 HVHVDQNSLAGNVFVKVASAASCQSAVNSLHGRQFRGRSVTAAYVPLPNYHQLFPASV 485
>gi|209878175|ref|XP_002140529.1| splicing factor, CC1-like family domain-containing protein
[Cryptosporidium muris RN66]
gi|209556135|gb|EEA06180.1| splicing factor, CC1-like family domain-containing protein
[Cryptosporidium muris RN66]
Length = 555
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 180/384 (46%), Gaps = 55/384 (14%)
Query: 260 ADERDVYEFFS-RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQP 318
A E DVYEFF+ AG VRD+R+I D+ S RSKGV YVEFY SV A+ LSGQ ++ P
Sbjct: 212 AAEYDVYEFFAAHAGNVRDIRIIRDQRSGRSKGVCYVEFYTAESVIKALKLSGQSIMNSP 271
Query: 319 VMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL--HFN-MTEDQLRQVFEP 375
V ++ S+AEKN + + +LYVG L H + +TED++ ++F
Sbjct: 272 VTIQASQAEKNRAAKLAKLQELEAEIV------PLKLYVGGLVDHLSKLTEDEINKLFRT 325
Query: 376 FGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGL 434
FG ++ V++P D T +GF +V F + D A+ EI G+ I V+ D
Sbjct: 326 FGPIKSVEIPRDPHTDKHQGFAYVTFQKTIDGHEAMRALNNYEIAGQRITVALSVDTPTN 385
Query: 435 QDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPT 494
+G+ + S+N S A + +D G ++ L
Sbjct: 386 NSIGSTS------------SINVMSYAPSIS-IDLYG--------------DTEKLEDVD 418
Query: 495 APLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFD 554
LL AS+ S L+ L + QL +P + + S CL+L NMF
Sbjct: 419 GGLLSGASSRSILMKKLQEREFGRTETQL----------IPQDEILKTSSRCLVLGNMFT 468
Query: 555 PKNETYEEFDMD------IKEDVEGECSKFGKLKHIFVE-KDSAGFVYLRFENTQSAFAA 607
+ + D+D I++DVE EC K+G++ ++ K G V+++++ A A
Sbjct: 469 REEILDSKGDIDIITLEEIEKDVESECKKYGEVLECRIDHKKCDGKVWIKYKEAIYAKKA 528
Query: 608 QRALHGRWFAGKMITATFMVPQTY 631
+A GR+F G+ + + T+
Sbjct: 529 SQAFKGRFFGGRPVQIDLVSEDTF 552
>gi|66363398|ref|XP_628665.1| splicing factor with 3 RRM domains [Cryptosporidium parvum Iowa II]
gi|46229660|gb|EAK90478.1| splicing factor with 3 RRM domains [Cryptosporidium parvum Iowa II]
Length = 563
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 192/434 (44%), Gaps = 65/434 (14%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
RD TV + L A E +VYEFF+ AG VRD+R+I D + RSKGV YVEFY V SV
Sbjct: 131 RDDLTVLVMNLNLDAREFEVYEFFTTYAGNVRDIRIIRDHRTGRSKGVCYVEFYSVESVL 190
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
A+ LSGQ ++ P+ V+ S+AEKN + + T P L VG L +
Sbjct: 191 KALKLSGQKIMNTPITVQASQAEKNRAAKLAKLEEIK-AETTPLLLRVDGL-VG-LLARI 247
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAI 423
D++ +F FG V + + +D +T C GF + F + + +A+ EI G+ I
Sbjct: 248 RRDEIESLFSTFGKVNKIDIEIDKKTQRCLGFAHILFEKAIEGHDAIKALNNFEIAGQKI 307
Query: 424 KVSAVTD-QSGLQ---DLGANTTGDF----------DDDEGGGLSLNARSRALLMQKLDR 469
V+ + S ++ L ++T + ++ G S + R + KLD
Sbjct: 308 TVTISQECNSSIKVSNCLASSTFNSYLSPSAVSNSQNEPSKGNSSAHNLERVSELDKLDE 367
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQL------ 523
S A + + T LL A + PP+ + + T +
Sbjct: 368 SEEAVLLGADSRN---------FLTKKLLARAQSQIDNPPPIQETSNDTSSSTILNTSLP 418
Query: 524 --------GTALQVPTASVPI--------------FDTIGVPSECLLLKNMFDPK----- 556
L ++P+ F+ + CLLL NMF +
Sbjct: 419 SPSSSIPSLNQLSNTNQNLPVLTEAYSQSSSNNIEFNNSEIHLRCLLLSNMFTEQSIKES 478
Query: 557 ---NETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALH 612
+ET E+ +I+ DVE EC K+G L F++K+ G V++++ + A A+ H
Sbjct: 479 MEEDETIEQILEEIQADVEEECGKYGTLLECFLDKEKMDGNVWVKYSRPEEASKAKMVFH 538
Query: 613 GRWFAGKMITATFM 626
GR+FAG+ + +F+
Sbjct: 539 GRFFAGRKLNVSFI 552
>gi|156087761|ref|XP_001611287.1| splicing factor, CC1-like family protein [Babesia bovis]
gi|154798541|gb|EDO07719.1| splicing factor, CC1-like family protein [Babesia bovis]
Length = 488
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 208/426 (48%), Gaps = 75/426 (17%)
Query: 223 DNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFS-RAGKVRDVRLI 281
D ++ +R EK+ Q E E + +R+ TV + L ADER +YE FS AGKVRDV+ +
Sbjct: 118 DPEELARIEHEKRRQREIE-EAQREDLTVLVINLYLGADERKIYEVFSEHAGKVRDVQCV 176
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN-------LVQSN 334
D S RSKGV YVEFY SV A+A++G L GQ + V+ S+AEKN ++Q
Sbjct: 177 RDARSGRSKGVAYVEFYTQESVIKALAMNGFELNGQRIRVQSSQAEKNRAARAAKMIQQQ 236
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCK- 393
+ S P++ L G+L +++E ++RQ+F PFG + V++ D +
Sbjct: 237 TVEVADS-----PFTIQVTGL-TGSLS-SISEVEIRQMFSPFGNIISVEILRDPHSNLPL 289
Query: 394 GFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFD----DDE 449
G +++F R +A+ A+ +I G+ IKV+ T S L +T G+ D D++
Sbjct: 290 GQAYIKFKRTSEAKEAVTAMNGFDIGGQTIKVAYATGASAKGRL--STHGEVDIERLDED 347
Query: 450 GGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVP 509
GGGL A ++ LM KL R+ S T NS L + S +S+
Sbjct: 348 GGGLISGATNKIALMHKLQRTSSDT-----------NS---HLSSGSSGDTNSGISSK-- 391
Query: 510 PLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEE--FDMDI 567
PT ++ L NMF + + E F ++
Sbjct: 392 --------------------PTCNIT-------------LSNMFSSSDPSVSEPTFFDEV 418
Query: 568 KEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
+EDV EC+K+GK+ +++ + G V+++F N + A R+L+GR FAG I A ++
Sbjct: 419 EEDVNEECNKYGKVLKVYINRGVIDGKVWVKFGNVVDSTVAFRSLNGRVFAGNTIKAEYV 478
Query: 627 VPQTYE 632
+ ++
Sbjct: 479 TDEYWQ 484
>gi|326438129|gb|EGD83699.1| hypothetical protein PTSG_04304 [Salpingoeca sp. ATCC 50818]
Length = 541
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 194/399 (48%), Gaps = 27/399 (6%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFS-RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
+RD RTV Q+ D+ +F +AGK+ R++ DRN+ RSKG+ Y EF D SV
Sbjct: 147 DRDARTVTCLQLHRTCTAEDLGQFLEEKAGKLVSCRIVRDRNTGRSKGIAYAEFEDESSV 206
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
+A++L+GQ L G P++V P+ AE+N Q+ T R+ V NL
Sbjct: 207 TVALSLTGQRLKGAPLVVMPTMAERNR-QAAEKAKQEQLART--------RVIVENLPEK 257
Query: 364 MT-EDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGR 421
+ E+ L ++F FG V+ L D+ G G+G+V F +DA+ A+ +NGQ I +
Sbjct: 258 IEDEEALEKLFARFGRVKKGVLTKDQFGRPLGYGYVVFGFAKDAKEAVTGMNGQ-AIDDK 316
Query: 422 AIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAV 481
+KV+ D S L + + D L L +R + G A
Sbjct: 317 VLKVTLAVDAS--PQLASQV--NLDTQPKPNLPLPQPNRPNFRPNMSMP------LGQAP 366
Query: 482 TPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVP-THPGQLGTALQVPTASVPIFDTI 540
+ P P++ + PP V G VP P + Q P S+P
Sbjct: 367 AVPAVVPPISRPPLPMMAPLMPAPPMRPPGVPGQVPAITPMPMSQPTQ-PQPSLP-GGVS 424
Query: 541 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFE 599
+P+ L L NMFDP ET ++ D++++V +K+G + HIFV+K + G V+L+F+
Sbjct: 425 QMPTNFLKLSNMFDPAAETDPDWHEDVRDEVLEASTKYGPVFHIFVDKTAPQGQVFLKFK 484
Query: 600 NTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
++ ++ A +A++GR F G+ + A +M Y +F D+
Sbjct: 485 DSVASAQAYQAMNGRLFDGRTVKAEYMKETFYTTRFLDA 523
>gi|50553814|ref|XP_504318.1| YALI0E23628p [Yarrowia lipolytica]
gi|49650187|emb|CAG79917.1| YALI0E23628p [Yarrowia lipolytica CLIB122]
Length = 621
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 141/256 (55%), Gaps = 24/256 (9%)
Query: 183 ERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEV 242
ER R V E + R+R+ ER R+R R E E ER + E R P K ++ E
Sbjct: 274 ERYRPDWVQEWDTYRNRDS-ERARARYRRW-ETEHER-----NYERRGPISKNHELSAE- 325
Query: 243 DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMS 302
+RD+RTV+ Q+ ++++FF+ AG V DV L+ DR+SR +GV +VEF DV S
Sbjct: 326 --DRDKRTVYVQQVAPHVQSTELFDFFAEAGPVHDVSLVKDRSSR-CRGVAFVEFEDVES 382
Query: 303 VPMAIALSGQPLLGQPVMVKPSEAEKNL--VQSNSSIAGASGGGTGPYSGGA-------- 352
V AI L+G+ L GQ ++++ +++ +N QS +S + G T +
Sbjct: 383 VSRAIGLTGRSLHGQALLIRCTDSARNREEQQSEASFNSSGAGSTHAVANVNASTSAIDS 442
Query: 353 ---RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNA 409
RLYVGN++F +TE ++ Q+FE FG +E L ++TG KG+ F+Q+ +DA+ A
Sbjct: 443 VRFHRLYVGNIYFGVTEGEIIQIFEAFGPIEFADLQKEKTGKSKGYCFIQYVNPDDAKTA 502
Query: 410 LNLNGQLEIVGRAIKV 425
L E+ GR ++V
Sbjct: 503 LEKMNGFELAGRKLRV 518
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 137/260 (52%), Gaps = 41/260 (15%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
+RD TV + LKADERD+YEFFS AGKVRD++ I D+ S +SKGV YVEFY SV
Sbjct: 143 KRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESV 202
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLH-- 361
A+A +G L +P+ V+ S+AEKN A AS + +LY+G L
Sbjct: 203 IKALAANGYMLKNRPIKVQSSQAEKN------RAAKASKHHPIDPNDIPLKLYIGGLLGP 256
Query: 362 -FNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
N+TE +L+Q+F PFG + V++ D TG KGFGF+QF + +A A+ + +E+
Sbjct: 257 LSNITEQELKQLFNPFGDILEVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVA 316
Query: 420 GRAIKVSAVTDQS------GLQDL-------------GANTTGDFDDDEGG--------- 451
GR IKVS D L+DL G TG+ +D++
Sbjct: 317 GREIKVSYAQDSKYLLASDALKDLNIPNLNQIKAAAQGGRKTGNQEDEQDNEKIDNDDDD 376
Query: 452 --GLSLNARSRALLMQKLDR 469
GL A S+ LMQKL R
Sbjct: 377 GGGLITGASSKIALMQKLQR 396
>gi|67604702|ref|XP_666635.1| splicing factor [Cryptosporidium hominis TU502]
gi|54657670|gb|EAL36408.1| splicing factor [Cryptosporidium hominis]
Length = 563
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 188/418 (44%), Gaps = 61/418 (14%)
Query: 260 ADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQP 318
A E +VYEFF+ AG VRD+R+I D + RSKGV YVEFY V SV A+ LSGQ ++ P
Sbjct: 145 AREFEVYEFFTTYAGNVRDIRIIRDHRTGRSKGVCYVEFYSVESVLKALKLSGQKIMNTP 204
Query: 319 VMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGT 378
+ V+ S+AEKN + + T P L VG L + D++ +F FG
Sbjct: 205 ITVQASQAEKNRAAKLAKLEEIK-AETTPLLLRVDGL-VG-LLARIRRDEIESLFSTFGK 261
Query: 379 VELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV-------SAVTD 430
V + + +D +T C GF + F + + +A+ EI G+ I V S+V
Sbjct: 262 VNKIDIEIDKKTQRCLGFAHILFEKAIEGHDAIKALNNFEIAGQKITVTISQECNSSVKV 321
Query: 431 QSGLQDLGANT--------------------------TGDFD--DDEGGGLSLNARSRAL 462
+ L N+ +FD D+ + L A SR
Sbjct: 322 SNCLASSTFNSYSSPSVVSNSQNEPSKGNSSAHNLERVSEFDKLDESEEAVLLGADSRNF 381
Query: 463 LMQKLDRSGSATTIAGSAV--TPAVNSTALPLPTAPLLGAASAVSTLVPPL---VQGTVP 517
L +KL A S + P + T+ ++ +L + + + T
Sbjct: 382 LTKKL------LARAQSQIDNPPPIQETSNNTSSSTILNTSLPSPSSSISPLNQLSNTNQ 435
Query: 518 THPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPK--------NETYEEFDMDIKE 569
P GT Q + ++ F+ + CLLL NMF + +ET E+ +I+
Sbjct: 436 NLPVLTGTDSQSSSNNIE-FNKSEIHLRCLLLSNMFTEQSIKESMEEDETIEQILEEIQA 494
Query: 570 DVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
DVE EC K+G L F++K+ G V++++ + A A+ HGR+FAG+ + +F+
Sbjct: 495 DVEEECGKYGTLLECFLDKEKMDGNVWVKYSRPEEASKAKMVFHGRFFAGRKLNVSFI 552
>gi|401411525|ref|XP_003885210.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
gi|325119629|emb|CBZ55182.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
Length = 642
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 121/218 (55%), Gaps = 9/218 (4%)
Query: 219 RESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFS-RAGKVRD 277
RE + K+ R + KK +VE + RD TV +CLKA+E+ +YEFFS AGK+RD
Sbjct: 196 RERDEQQKKQREDELKKREVE---EARRDDLTVLVLNLCLKAEEKHIYEFFSANAGKIRD 252
Query: 278 VRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSI 337
++LI D+ S SKGV YVEFY SV A+AL+G GQP+ V+ S AEKN +
Sbjct: 253 IQLIRDQRSGTSKGVAYVEFYTQESVIKAMALNGIAFKGQPLRVQASMAEKNRAARAAKQ 312
Query: 338 AGASGGGT-GPYSGGARRLYVGNLHFNMT---EDQLRQVFEPFGTVELVQLPLD-ETGHC 392
GG R+YVG L ++ E+ LR +F PFG + V++P D TG
Sbjct: 313 QQQGGGAAESAVVSIPMRVYVGGLVDSLAKIQEEDLRVLFGPFGRINEVEIPKDANTGGL 372
Query: 393 KGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 430
+G+GFV +A DA A+ E++G+ ++V D
Sbjct: 373 RGYGFVTYASAADAHEAMQHMNNFELLGQQLRVGYAAD 410
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Query: 547 LLLKNMFDPKNETYEE---FDMDIKEDVEGECSKFGKLKHIFV-EKDSAGFVYLRFENTQ 602
++L NMF PK+ +E F +D+ +DV EC KFG ++ +++ E++ G V++RF +
Sbjct: 549 VVLHNMFAPKDVDLKEDPHFFLDLGDDVRDECKKFGSVEKVWIDERNVDGNVWIRFAHPD 608
Query: 603 SAFAAQRALHGRWFAGKMITATFM 626
A AA AL+GR+FAGK I+A F+
Sbjct: 609 QARAAFGALNGRYFAGKPISAEFI 632
>gi|221487552|gb|EEE25784.1| splicing factor protein, putative [Toxoplasma gondii GT1]
Length = 633
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 120/218 (55%), Gaps = 9/218 (4%)
Query: 219 RESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFS-RAGKVRD 277
RE + K+ R + KK +VE + RD TV +CLKA+E+ +YEFFS AGK+RD
Sbjct: 191 RERDEQQKKQREDELKKREVE---EARRDDLTVLVLNLCLKAEEKHIYEFFSANAGKIRD 247
Query: 278 VRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSI 337
++LI D+ S SKGV YVEFY SV A+AL+G GQP+ V+ S AEKN +
Sbjct: 248 IQLIRDQRSGTSKGVAYVEFYTQESVIKAMALNGIAFKGQPLRVQASMAEKNRAARAAKQ 307
Query: 338 AGASGGGT-GPYSGGARRLYVGNLHFNMT---EDQLRQVFEPFGTVELVQLPLD-ETGHC 392
G R+YVG L N+ E+ LR +F PFG + V++P D TG
Sbjct: 308 QQQGGAAAESAVVSIPMRVYVGGLVDNLAKIQEEDLRVLFGPFGRINEVEIPKDANTGGL 367
Query: 393 KGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 430
+G+GFV +A DA A+ E++G+ ++V D
Sbjct: 368 RGYGFVTYASAADAHEAMQHMNNFELLGQQLRVGYAAD 405
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Query: 529 VPTASVPIFDTIGVPSECLLLKNMFDPKNETYEE---FDMDIKEDVEGECSKFGKLKHIF 585
+P ++ +F S ++L NMF K+ +E F +D+ +DV EC KFG ++ ++
Sbjct: 522 LPASNGALFADNATGSCNVVLHNMFAAKDVNLKEDPHFFLDLGDDVRDECKKFGSVEKVW 581
Query: 586 V-EKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
+ E++ G V++RF + A AA AL+GR+FAGK I+A F+
Sbjct: 582 IDERNVDGNVWIRFAHPDQARAAFGALNGRYFAGKPISAEFI 623
>gi|237830355|ref|XP_002364475.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|211962139|gb|EEA97334.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|221507345|gb|EEE32949.1| splicing factor protein, putative [Toxoplasma gondii VEG]
Length = 633
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 120/218 (55%), Gaps = 9/218 (4%)
Query: 219 RESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFS-RAGKVRD 277
RE + K+ R + KK +VE + RD TV +CLKA+E+ +YEFFS AGK+RD
Sbjct: 191 RERDEQQKKQREDELKKREVE---EARRDDLTVLVLNLCLKAEEKHIYEFFSANAGKIRD 247
Query: 278 VRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSI 337
++LI D+ S SKGV YVEFY SV A+AL+G GQP+ V+ S AEKN +
Sbjct: 248 IQLIRDQRSGTSKGVAYVEFYTQESVIKAMALNGIAFKGQPLRVQASMAEKNRAARAAKQ 307
Query: 338 AGASGGGT-GPYSGGARRLYVGNLHFNMT---EDQLRQVFEPFGTVELVQLPLD-ETGHC 392
G R+YVG L N+ E+ LR +F PFG + V++P D TG
Sbjct: 308 QQQGGAAAESAVVSIPMRVYVGGLVDNLAKIQEEDLRVLFGPFGRINEVEIPKDANTGGL 367
Query: 393 KGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD 430
+G+GFV +A DA A+ E++G+ ++V D
Sbjct: 368 RGYGFVTYASAADAHEAMQHMNNFELLGQQLRVGYAAD 405
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Query: 529 VPTASVPIFDTIGVPSECLLLKNMFDPKNETYEE---FDMDIKEDVEGECSKFGKLKHIF 585
+P ++ +F S ++L NMF K+ +E F +D+ +DV EC KFG ++ ++
Sbjct: 522 LPASNGALFADNATGSCNVVLHNMFAAKDVNLKEDPHFFLDLGDDVRDECKKFGSVEKVW 581
Query: 586 V-EKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
+ E++ G V++RF + A AA AL+GR+FAGK I+A F+
Sbjct: 582 IDERNVDGNVWIRFAHPDQARAAFGALNGRYFAGKPISAEFI 623
>gi|66810518|ref|XP_638966.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
gi|60467589|gb|EAL65610.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
Length = 727
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 119/197 (60%), Gaps = 22/197 (11%)
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
PE D E DQRTVF ++ E+D+ + FS+AG V +VRLI D+ ++R KGVGYVEF
Sbjct: 257 PEPDEESDQRTVFVSKLSQNIVEKDLSDLFSQAGTVLNVRLITDKVTKRMKGVGYVEFSQ 316
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
V AIALSG L GQ ++V + EK +++SNS TG SGG R+YVG
Sbjct: 317 KEMVDKAIALSGSVLDGQQILVHSIQPEKKVIKSNS---------TGS-SGGESRIYVGY 366
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCK----GFGFVQFARLEDARNALN-LNG 414
+H ++ E+Q+R +F+P+G ++ + + H K + F+QF E A+ A+ LNG
Sbjct: 367 IHLSVAEEQIRVIFQPYGDIDFINI------HTKPGISKYAFIQFKTQESAKRAITELNG 420
Query: 415 QLEIVGRAIKVSAVTDQ 431
E++G+ +K++ V+ +
Sbjct: 421 -YELMGKNLKLNMVSQE 436
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 99/197 (50%), Gaps = 21/197 (10%)
Query: 440 NTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLG 499
N D+D+GG + L A RALL KL G +TP N+ +
Sbjct: 551 NALSSLDEDDGG-IPLTAHGRALLTAKLQ---------GKTLTPPSNNLNNNINNNNNNI 600
Query: 500 AASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNET 559
ST TV +P T + P +P F + S CL+L+NMFDP+ ET
Sbjct: 601 NNLNNST-------HTV-INPSLASTGIITPYTQLPHFAFV---STCLILRNMFDPETET 649
Query: 560 YEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGK 619
E +D DI + ECS FGK+ HI+++K++ G +Y+R++N +S A + LHGRWF+ K
Sbjct: 650 EENWDQDILSETHAECSTFGKIMHIYLDKNTKGCIYIRYDNNESPLKAIQKLHGRWFSKK 709
Query: 620 MITATFMVPQTYEAKFP 636
I A + Y+ +FP
Sbjct: 710 QIIAELVPEPVYKLQFP 726
>gi|302843264|ref|XP_002953174.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
gi|300261561|gb|EFJ45773.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
Length = 556
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 22/174 (12%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
RTVFAY + L+ADERD++EFFS+ G+V D+RLI D+N+++S+G+ YVEF V V A+A
Sbjct: 79 RTVFAYNLSLRADERDIFEFFSKVGRVVDIRLITDKNTKKSRGLAYVEFSKVEEVISAVA 138
Query: 309 LSGQPLLGQPVMVKPSEAEKN-------------------LVQSNSSIAGASGGGTGPYS 349
L+G L GQPVMVK SEAEKN L+ S +S G+ G GT +
Sbjct: 139 LTGNILKGQPVMVKASEAEKNMAWEAAQQQKHSAQAATHQLLSSLASSTGSGGKGTNQVA 198
Query: 350 ---GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQF 400
G L V NL + E +++Q+F PFG +E VQL D TG G +++F
Sbjct: 199 LAGNGPCWLQVSNLVKELGEAEVQQLFAPFGKLEAVQLRRDATGRSTGIAYLKF 252
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 104/206 (50%), Gaps = 45/206 (21%)
Query: 443 GDFD-DDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAA 501
G+ D D+EGGG+ ++A+ R LM KL AGSA PA ++ LP A
Sbjct: 351 GELDEDNEGGGIKMSAQGRVALMTKL---------AGSAGLPAPPTSVLPAGVTN--AVA 399
Query: 502 SAVSTLVPPLV--QGTV-PTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNE 558
AV ++ P L+ QG + P+ P + + CLLLKNMFD
Sbjct: 400 HAVLSVDPVLLMQQGVLGPSSP---------------------IATPCLLLKNMFDAAAS 438
Query: 559 TYEE---------FDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQR 609
+ +++ DV ECS+FG+L H++V+ S GFVYLRF TQSA AA R
Sbjct: 439 AGDAAAQNAAASVLAAEVEVDVREECSRFGELLHVWVDAKSKGFVYLRFATTQSAEAAHR 498
Query: 610 ALHGRWFAGKMITATFMVPQTYEAKF 635
ALHGRW++G+ I A + Y + F
Sbjct: 499 ALHGRWYSGRQILAEYQFMPLYNSHF 524
>gi|281205731|gb|EFA79920.1| putative RNA splicing factor [Polysphondylium pallidum PN500]
Length = 606
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 136/243 (55%), Gaps = 26/243 (10%)
Query: 208 RDRELKEREKERESRDNDKE-----SRRPKEK---KEQVEPEVDPER----DQRTVFAYQ 255
RDR + E+ESR +K SRR EK E V PE+ PE D RTVF +
Sbjct: 165 RDRRSSSGKYEKESRYPEKPYDKPISRRSPEKPAAAEPVLPEISPEEQEESDSRTVFVSK 224
Query: 256 ICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLL 315
+ K E D+YEFF++AGKV V L++D+ ++R KGVGYVEF + V A+ L+GQ +L
Sbjct: 225 LSPKITENDLYEFFAQAGKVLKVSLVIDKITKRLKGVGYVEFSEREMVEKAVLLTGQKVL 284
Query: 316 GQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEP 375
Q ++V +EK A+ P RLYVG L+ ++TEDQ+R +F
Sbjct: 285 NQSILVHGIHSEKK----------ATPVTKIPVHTNNSRLYVGYLNLSITEDQIRTIFSQ 334
Query: 376 FGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKVSAVTDQSGL 434
G +E V+L + + G K + FVQF E A+ AL+ LNG +E++G+ +KV V +
Sbjct: 335 HGDLEFVKLHV-KPGLYK-YAFVQFKASESAQKALDALNG-VEVMGKNLKVVFVNENGTN 391
Query: 435 QDL 437
+DL
Sbjct: 392 KDL 394
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 71/103 (68%)
Query: 534 VPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGF 593
+P + + S C++LKNMFDP ET +++D +I+ DVE ECS +G +KHIF++K+S G+
Sbjct: 499 IPPAPPVTITSTCIVLKNMFDPDTETGDDWDKEIERDVELECSTYGNVKHIFLDKNSQGY 558
Query: 594 VYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFP 636
+YL +++ + A A L+ RWFAGKM++A + Y AKFP
Sbjct: 559 IYLCYDSIEGASTAINKLNRRWFAGKMLSAESIPENIYFAKFP 601
>gi|361128675|gb|EHL00605.1| putative RNA-binding protein rsd1 [Glarea lozoyensis 74030]
Length = 694
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 113/204 (55%), Gaps = 21/204 (10%)
Query: 228 SRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSR 287
SR PK +E P + ERD+RTVF Q+ + RD+ FF + G V++ +++ DR S
Sbjct: 330 SRSPK--REATPPLTEDERDRRTVFVQQLAARLRTRDLIGFFEKVGPVKEAQIVKDRVSG 387
Query: 288 RSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGP 347
RSKGVGYVEF + SVP AI L+GQ LLG P++ + +EAEKN N AG++ P
Sbjct: 388 RSKGVGYVEFKNEESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPEAAGSN-----P 442
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDAR 407
S RLY VFEPFG +E VQL +E G +G+GFVQF AR
Sbjct: 443 NSIPFHRLY--------------NVFEPFGELEFVQLQKEEQGRSRGYGFVQFRDPNQAR 488
Query: 408 NALNLNGQLEIVGRAIKVSAVTDQ 431
AL ++ GR I+V D+
Sbjct: 489 EALEKMNGFDLAGRPIRVGLGNDK 512
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 533 SVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSA 591
S P+ + + S C++LK+MFDP + +++ +++++V E +K+G + HI ++ +S
Sbjct: 581 SKPLPPGVNMASRCVVLKHMFDPTGQDNDDWIKELEDEVRAEAEAKYGHVVHIAIDPNSD 640
Query: 592 GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTY 631
G +YL+F+ Q A + L+GR+F G+ I AT +V Y
Sbjct: 641 GDIYLKFDRVQGGENAIKGLNGRFFDGRTINATPVVDAVY 680
>gi|85001331|ref|XP_955384.1| RNA splicing factor [Theileria annulata strain Ankara]
gi|65303530|emb|CAI75908.1| RNA splicing factor, putative [Theileria annulata]
Length = 643
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 187/437 (42%), Gaps = 94/437 (21%)
Query: 208 RDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYE 267
RD L EK + R N+ E RR K+ +E +RD TV + L DERD+YE
Sbjct: 283 RDIGLDIMEKAKMLRSNEMERRRMKDIEE-------AQRDDLTVLVSNMHLSVDERDIYE 335
Query: 268 FFS-RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA 326
FS AGKVRD++ + D S RSKG+ YVEFY SV A++++G + GQ + V S+A
Sbjct: 336 LFSEHAGKVRDIQCVRDLRSGRSKGIAYVEFYTQESVIKALSMTGMSMKGQGIRVHSSQA 395
Query: 327 EKN-------LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTV 379
EKN +Q N A P + L +G L + + E +L Q+F PFG +
Sbjct: 396 EKNRAAKAAKQLQDN-----ALKESDNPTTIVVSNL-LGVLSY-LNEIELNQLFSPFGNI 448
Query: 380 ELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTD----QSGLQ 435
V L + G KG+ +++F R +A+ ALN+ +I G+ IKV+ +S L
Sbjct: 449 IDVALARTDNGESKGYAYIRFKRWNEAKEALNVMNGFDINGQQIKVAYANTRKDPKSRLH 508
Query: 436 DLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTA 495
LG DDD+ G +S + + LM+KL + +NS+ L L
Sbjct: 509 SLGDLDMERLDDDDAGLIS-GSNVKIALMKKLQQR------------QPLNSSNLVLSNM 555
Query: 496 PLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDP 555
A A + ++ V G+ GT +QV N +P
Sbjct: 556 -YTSADYADNHEFFDEIEEDVKEECGKYGTVVQV-------------------FVNRRNP 595
Query: 556 KNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRW 615
+ Y +F +N A +A ++L GR+
Sbjct: 596 DGKVYVKF-----------------------------------KNNDDAQSANKSLQGRY 620
Query: 616 FAGKMITATFMVPQTYE 632
FAG I +++ Y+
Sbjct: 621 FAGNTIQVSYISDDQYQ 637
>gi|71026268|ref|XP_762815.1| splicing factor [Theileria parva strain Muguga]
gi|68349767|gb|EAN30532.1| splicing factor, putative [Theileria parva]
Length = 644
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 29/289 (10%)
Query: 191 IERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRT 250
+E ++S DR +RE RD L EK + R N+ E RR K+ +E +RD T
Sbjct: 269 VEYQKS-DRTDNDRE-PRDIGLDIMEKAKILRSNEMERRRMKDIEE-------AQRDDLT 319
Query: 251 VFAYQICLKADERDVYEFFS-RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIAL 309
V + L DERD+YE FS AGKVRD++ + D S RSKG+ YVEFY SV A+++
Sbjct: 320 VLVSNMHLSVDERDIYELFSEHAGKVRDIQCVRDLRSGRSKGIAYVEFYTQESVIKALSM 379
Query: 310 SGQPLLGQPVMVKPSEAEKN-------LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHF 362
+G + GQ + V S+AEKN +Q N A P + L +G L +
Sbjct: 380 TGMSMKGQGIRVHSSQAEKNRAAKAQKQLQDN-----ALKESDNPTTIVVSNL-LGVLSY 433
Query: 363 NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
+ E +L Q+F PFG + V L + G+ KG+ +++F R +A+ ALN+ +I G+
Sbjct: 434 -LNEIELNQLFSPFGNIIDVALARTDDGNSKGYAYIRFKRWNEAKEALNVMNGFDINGQQ 492
Query: 423 IKVSAVT----DQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL 467
IKV+ +S L LG DDD+ G +S + + LM+KL
Sbjct: 493 IKVAYANTRKDSKSRLHSLGDVDMERLDDDDAGLIS-GSNIKIALMKKL 540
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 542 VPSECLLLKNMFDPKN-ETYEEFDMDIKEDVEGECSKFGKLKHIFVEK-DSAGFVYLRFE 599
+ S L+L NM+ + E EF +I+EDV+ EC K+G + +FV K + G VY++F+
Sbjct: 546 LNSSNLVLSNMYTSADYEDNREFFDEIEEDVKEECGKYGTVIQVFVNKRNPDGKVYVKFK 605
Query: 600 NTQSAFAAQRALHGRWFAGKMITATFMVPQTYE 632
N A AA ++L GR+FAG I +++ Y+
Sbjct: 606 NNDDAQAANKSLQGRYFAGNTIQVSYISDDQYQ 638
>gi|297259926|ref|XP_002798213.1| PREDICTED: RNA-binding protein 39-like [Macaca mulatta]
Length = 427
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 149/291 (51%), Gaps = 29/291 (9%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
AR ++ L + L + F G +E +QL +D ETG KG+GF+ F+ E A+ AL
Sbjct: 152 ARTVFCMQLAARIRPRDLEEFFSTVGKIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 211
Query: 411 -NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDR 469
LNG E+ GR +KV VT+++ A++ D D+ E G+ L R LM +L
Sbjct: 212 EQLNG-FELAGRPMKVGHVTERTDASS--ASSFLDSDELERTGIDLGTTGRLQLMARLAE 268
Query: 470 SGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQV 529
G + PA AL + + GA + + T L Q T + + +
Sbjct: 269 G------TGLQIPPAAQQ-ALQMSGSLAFGAVADLQTR---LSQQTEASALAAAASVQPL 318
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
T +C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+
Sbjct: 319 AT-------------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 365
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 366 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 416
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ EFFS GK+ ++L+MD + RSKG
Sbjct: 139 REPIDNLTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKIESIQLMMDSETGRSKG 195
Query: 292 VGYVEFYDVMSVPMAI-ALSGQPLLGQPVMV 321
G++ F D A+ L+G L G+P+ V
Sbjct: 196 YGFITFSDSECAKKALEQLNGFELAGRPMKV 226
>gi|294881541|ref|XP_002769399.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
gi|239872808|gb|EER02117.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
Length = 629
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 183/414 (44%), Gaps = 70/414 (16%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
R RTV Q+ + +R VY S+ AGKVRDV++I D S+RSKG+ YVEF + S
Sbjct: 262 RASRTVLIAQLGMDVSDRTVYLLMSKMAGKVRDVQIIRDGRSQRSKGIAYVEFEEQESAM 321
Query: 305 MAIALSGQPL---LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG--- 358
A+ + L LG ++PS+AEKNL S ++ SG RLYVG
Sbjct: 322 KALGIEPTSLWTRLGHGANIQPSQAEKNL-NSTQAVLNPSGERVNEC-----RLYVGGSA 375
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
NL +++ED LR +F+PFG ++ V G + FVQ+ + AR+AL + I
Sbjct: 376 NLVADLSEDDLRALFQPFGPLDFVDRHPRNQGEGGTYAFVQYGDSDHARSALKGLSGMMI 435
Query: 419 VGRAIKVSAVTDQSGLQD-----LGANTTGDF--DDDEG----GGLSLNARSRALLMQKL 467
G+ +KV T + +G NT D D++EG GL + SRA LM+ +
Sbjct: 436 GGKELKVGMATSAASAGLASSVVVGPNTDLDLVEDNEEGPSTHTGLLKDNLSRARLMRAM 495
Query: 468 DRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTAL 527
R P ++L + +A L A++ S
Sbjct: 496 VRE------------PISEGSSLLMKSASRLPASNLASAASGAATGTG------------ 531
Query: 528 QVPTASVPIFDTIGVPSECLLLKNMFDPKNETY-----EEFDMDIKEDVEGECSKFGKLK 582
S L+L+N++ ++ E+F +I DV+ E +FG +
Sbjct: 532 ----------------SRVLILRNLWAAGDQLMHEGGPEKFFKEITNDVKSEAVRFGTIV 575
Query: 583 HIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
++++ S G +LRF +A L+ RWFAG+ + A + ++
Sbjct: 576 GCWLDEASENGDCWLRFTTGSAAAKCALGLNRRWFAGRQLVAVVVSEDKWDTGL 629
>gi|388583572|gb|EIM23873.1| splicing factor, CC1-like protein [Wallemia sebi CBS 633.66]
Length = 459
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 141/271 (52%), Gaps = 40/271 (14%)
Query: 229 RRPKEKKEQVEPEVDP-ERDQRTVFAYQICLKADERDVYEFFS-RAGK--VRDVRLIMDR 284
RR + + +E VD E +QR+VF Q+ + + D+ FF R G+ + D R++MD+
Sbjct: 77 RRERSPEIPIEDNVDSLESEQRSVFVSQLSTRTNSSDLRRFFQDRLGERSIVDARIVMDK 136
Query: 285 NSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKN-LVQSNSSIAGAS-- 341
NSRRSKG+GYVE + A+ L+G+ L G P++V SEA+KN +++SS+ S
Sbjct: 137 NSRRSKGIGYVEVKTASLIDKALELTGELLNGIPMIVTQSEADKNRQAKASSSLQTQSVQ 196
Query: 342 ----------------GGGTGPYSG-GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQL 384
P + ++YVG+L + + E +R VFEPFG +E V+L
Sbjct: 197 AEEVRRSTKSRDYDNRSSTINPANDPTLYKVYVGSLSYTLKEYDVRSVFEPFGEIEDVEL 256
Query: 385 PLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGD 444
+D+ KG+ +V++ R+ED+R A + E+ GR +KV V N GD
Sbjct: 257 SVDDQNRSKGYAYVKYKRMEDSRMACEQMNRFELAGRTLKVQLV-----------NYYGD 305
Query: 445 -----FDDDEGGGLSLNARSRALLMQKLDRS 470
E GL+LN+ SR LM+ L RS
Sbjct: 306 PVRMPEQSIENEGLNLNSVSRHELMKTLMRS 336
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 547 LLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDSA-GFVYLRFENTQSA 604
+LLK MF ET ++ ++ EDV+ EC +K+GK++ I V+K+S G + ++F +SA
Sbjct: 365 VLLKYMFKASEETEAGWEKELAEDVKTECENKYGKVQEIGVDKESEEGEIVVKFYTIESA 424
Query: 605 FAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
A L+GRWF G+ + A + + E K
Sbjct: 425 EDAINGLNGRWFGGRQVKAVNIADKFLEMKL 455
>gi|294932839|ref|XP_002780467.1| RNA-binding region-containing protein, putative [Perkinsus marinus
ATCC 50983]
gi|239890401|gb|EER12262.1| RNA-binding region-containing protein, putative [Perkinsus marinus
ATCC 50983]
Length = 571
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 169/587 (28%), Positives = 256/587 (43%), Gaps = 114/587 (19%)
Query: 88 RDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDH---DTDRDRE 144
RD DRP+ S R + + RG DRD+RER H D R
Sbjct: 60 RDDSADRPQGS-----------RAGVDRDDDDDVEREGRGDDRDKRERRHGREDHARRPR 108
Query: 145 KDKEKEREKSHR---------SGSQSERYRSDRDERERSRDREVIERERSRDREVIERER 195
+D++ + HR S+ ++R D R RSR R +R+ SR + R
Sbjct: 109 RDEDDRESRRHRDIERDRHHHHQSRHHQHRRDSPSRSRSRPRRPSKRDASRSPPAVNGTR 168
Query: 196 SRDREVIERERSRDRE--LKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFA 253
+R + RSRD E L+ ++K RE +SRR E + + R RTV
Sbjct: 169 ARTK------RSRDEEEYLRLQKKGRED-----DSRRGHEHQSR-------SRASRTVLI 210
Query: 254 YQICLKADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQ 312
Q+ + +R VY S+ AGKVRDV++I D S+RSKG+ YVEF D S A+ +
Sbjct: 211 AQLGMDVTDRTVYLVMSKQAGKVRDVQIIRDGRSQRSKGIAYVEFEDQNSAVKALGIEPT 270
Query: 313 PL---LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG---NLHFNMTE 366
L LG ++PS+AE+NL S S++ A G RLYVG NL +++E
Sbjct: 271 SLWTKLGHGANIQPSQAERNLYPSQ-SVSNAYGERVNEC-----RLYVGGSANLVADLSE 324
Query: 367 DQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVS 426
D LR +F+PFG ++ V G + FVQ+ E AR+AL + I G+ +KV
Sbjct: 325 DDLRALFQPFGPLDFVDRHPRNQGEGGTYAFVQYGDSEHARSALKGLSGMMIGGKELKVG 384
Query: 427 AVT------DQSGLQDLGANTTGDF--DDDEG----GGLSLNARSRALLMQKLDRSGSAT 474
T S +GANT D D++EG GL + SRA LM+ + R
Sbjct: 385 MATSAASAGLSSSSVVVGANTDLDLVEDNEEGPSTHTGLLKDNLSRARLMRAMVRE---- 440
Query: 475 TIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASV 534
P ++L + +A L A++ S
Sbjct: 441 --------PIAEGSSLLMKSATRLPASNLASAASGAATGTG------------------- 473
Query: 535 PIFDTIGVPSECLLLKNMFDPKNETY-----EEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
S L+L+N++ ++ E+F +I +DV+ E +FG + ++++
Sbjct: 474 ---------SRVLILRNLWAAGDQLMNEGGPEKFFKEITDDVKSEAKRFGTITGCWLDEA 524
Query: 590 SA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
S G +L+F +A L+ RWFAG+ + A + +EA
Sbjct: 525 SENGDCWLKFTTGAAAAKCSLGLNRRWFAGRQLVAVIVSEDKWEAGL 571
>gi|330791359|ref|XP_003283761.1| hypothetical protein DICPUDRAFT_74732 [Dictyostelium purpureum]
gi|325086384|gb|EGC39775.1| hypothetical protein DICPUDRAFT_74732 [Dictyostelium purpureum]
Length = 630
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 429 TDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNST 488
T+ S NT D++ GG+ L A RALL KL
Sbjct: 448 TNNSNQHTFKENTPLSSLDEDDGGIPLTAHGRALLTAKL------------------QGK 489
Query: 489 ALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLL 548
LP P + A A+ Q P + T++ P S+P F G S CL+
Sbjct: 490 VLPTPQQQM-AKAPAIQQQQQQQQQQQQPN----MQTSVIQPYTSLPQF---GFSSTCLI 541
Query: 549 LKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQ 608
L+NMFDP ET E++D DI + ECS+FGK++HI+++K++ G +Y+R++N +S A
Sbjct: 542 LRNMFDPDTETEEDWDQDITTETHSECSQFGKIQHIYLDKNTKGCIYIRYDNPESPLKAI 601
Query: 609 RALHGRWFAGKMITATFMVPQTYEAKFP 636
+ LHGRWF+ I A + Y+ KFP
Sbjct: 602 QKLHGRWFSKNEIIAELVPEPVYKLKFP 629
>gi|334362319|gb|AEG78359.1| RNA binding motif protein 39 [Epinephelus coioides]
Length = 238
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 131/263 (49%), Gaps = 49/263 (18%)
Query: 388 ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFD 446
ETG KG+GF+ FA E A+ AL LNG E+ GR +KV VT++S A++ D D
Sbjct: 3 ETGRSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTERS--DSSTASSFLDND 59
Query: 447 DDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVST 506
+ E G+ L R LM +L T L +P A A A+
Sbjct: 60 ELERTGIDLGTTGRLQLMARL-----------------AEGTGLKIPPA----AQQALQ- 97
Query: 507 LVPPLVQGTVP---------THPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKN 557
+ G++P AL +P+ + + CL L N+F+P+
Sbjct: 98 -----MTGSIPFGNIAAPPAVPTPAPSQALNLPSQPLA--------THCLQLSNLFNPQA 144
Query: 558 ETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWF 616
E + ++I++DV EC+K G + HI+V+K+SA G VY++ + +A A ALHGRWF
Sbjct: 145 ENDPSWAIEIQDDVIEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWF 204
Query: 617 AGKMITATFMVPQTYEAKFPDSI 639
AGKMITA ++ TY FPDS+
Sbjct: 205 AGKMITAAYVPLPTYHNLFPDSV 227
>gi|313213471|emb|CBY37276.1| unnamed protein product [Oikopleura dioica]
gi|313236201|emb|CBY11524.1| unnamed protein product [Oikopleura dioica]
Length = 497
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 114/198 (57%), Gaps = 28/198 (14%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG--YVEFYDVMS 302
+RD RTV A Q+ K E+D+ EFFS G VR V++I DR+SRRSK +G Y+EF S
Sbjct: 147 DRDSRTVLAMQLSQKTKEKDLKEFFSVVGDVRSVKMIQDRHSRRSKAIGIAYIEFKYSQS 206
Query: 303 VPMAIALSGQPLLGQPV-----MVKPSEAEKN----LVQSNSSIAGASGGGTGPYSGGAR 353
VP+A+ L+GQP V +V+ S+AEKN +V+S S G GP
Sbjct: 207 VPLALGLNGQP-----VNGIPIIVQQSQAEKNRHAQMVESAKQT--LSKLGNGPI----- 254
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFG---TVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
+L + NL ++E+ RQ+FEPFG +VEL+ P+ TG G GFV F+ + + AL
Sbjct: 255 KLKITNLIDEISEEMFRQIFEPFGRLDSVELIDDPI--TGKSAGSGFVTFSDSDAGKTAL 312
Query: 411 NLNGQLEIVGRAIKVSAV 428
+ ++ G+ I+VS V
Sbjct: 313 KELDRFDLGGKRIRVSVV 330
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 541 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFE 599
+ + C L NMF+P E ++ DI++DV E S G H+ V+K S G V++
Sbjct: 389 AIETRCFQLSNMFNPSKEKTGGWENDIRDDVILELSDHGGALHVHVDKFSKDGNVFVMAL 448
Query: 600 NTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
+ A A + +HG +F GKMI A ++ +Y FP+S
Sbjct: 449 SPAVAQIASKKVHGNYFDGKMIQAAYIPEASYMELFPES 487
>gi|238601653|ref|XP_002395467.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
gi|215466258|gb|EEB96397.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
Length = 180
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 115/239 (48%), Gaps = 70/239 (29%)
Query: 389 TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDD 448
TG KG+ FVQ+ R E A+ AL E+ GR ++V+ T D DD
Sbjct: 2 TGRSKGYAFVQYKRAEHAKMALEQMEGFELAGRTLRVN---------------TQDSLDD 46
Query: 449 EGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLV 508
GGG +LNA SR LMQKL R + P +LP P P
Sbjct: 47 SGGG-NLNAASRQALMQKLAR-----------IEP---PPSLPDPVTP------------ 79
Query: 509 PPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIK 568
+PT Q S +L+KNMFDP ET ++D ++
Sbjct: 80 ------NIPTQVMQ---------------------SRSVLMKNMFDPGEETERDWDKELA 112
Query: 569 EDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
+DV+GEC K+GK+ I VEK++ G +Y++F++ +SA A + L+GRWF GK +TATF+
Sbjct: 113 DDVKGECGEKYGKVTAIKVEKETQGEIYVKFDSIESAKKAVQGLNGRWFGGKQVTATFI 171
>gi|413957029|gb|AFW89678.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
Length = 224
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
K+E EPEVDPERDQRTVFAYQ+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 150 KEEVAEPEVDPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 209
Query: 294 YV 295
+
Sbjct: 210 NI 211
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Query: 530 PTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD 589
PTA + + + ++ LLLKNMFDP E E+ +DI++ V EC K G + HIFV+ +
Sbjct: 484 PTADL---SNVAIETQFLLLKNMFDPAQERDPEWQLDIRDTVLDECVKHGSVTHIFVDAN 540
Query: 590 SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
S GFV+++F + ++ A QR +HGRWFAGK+ITA ++ Y A+FP+S
Sbjct: 541 SPGFVFIKFSSVEACIAVQRTMHGRWFAGKLITADYVPEPMYHARFPES 589
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 120/264 (45%), Gaps = 64/264 (24%)
Query: 231 PKEKKEQVEPEVDPERDQR---TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSR 287
P ++EQ E + ERD+R TV +Q+ + ++ + FS G++RDV + DR
Sbjct: 173 PLTREEQ-EIRMAAERDERLKNTVIVHQLPTNVRKHEIEQVFSECGEIRDVAIQSDRARG 231
Query: 288 RSKGVGYVEFYDVMSVPMAIALSGQ-----PLLGQ------------------------- 317
R+ GV YVEF D +V A+ LS + P+L Q
Sbjct: 232 RAGGVAYVEFKDFAAVSKAMGLSSRRIDNIPMLVQATKPAAAALAMMGANAGGVSNTPAA 291
Query: 318 ---PVMVKPSEAEKNLV--QSNSSIA--------------------GASGGGTGPYSGGA 352
PV + P+ A N+ Q NS + A+ GT + A
Sbjct: 292 IARPVTLNPNSAAYNIATYQMNSGMTVQNVYHTMPLHSSAVHSAPLPAAPLGTAAIAMAA 351
Query: 353 R---RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNA 409
+ R+YVG+L F +TE ++ +F P G V V L D G KG+ FVQFA A+ A
Sbjct: 352 KQQTRVYVGSLDFALTEADVKSLFSPCGEVISVTLNRDN-GKSKGYAFVQFADAGAAKLA 410
Query: 410 LNLNGQLEIVGRAIKVSAVTDQSG 433
+ LNG +E+ GR +KV+ TD G
Sbjct: 411 MELNG-VEVAGRPLKVNFATDPEG 433
>gi|159163856|pdb|2CQ4|A Chain A, Solution Structure Of Rna Binding Domain In Rna Binding
Motif Protein 23
Length = 114
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 12 REPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 68
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSS 336
+ YVEF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + SS
Sbjct: 69 IAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLSGPSS 113
>gi|294882869|ref|XP_002769861.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239873674|gb|EER02579.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 364
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSR-AGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
RD TV I K E++VY F S+ AGKVRDV++I D + RSKGV YVEFY S+
Sbjct: 151 HRDDCTVMVMGIHPKCTEKEVYVFMSQNAGKVRDVQVIRDPRTNRSKGVAYVEFYTPDSI 210
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLH-- 361
A+A +GQ L+G P+ ++ S+AEKN + + R+YVG L
Sbjct: 211 LKALACNGQALMGHPIRIQASQAEKNRAAEAARVVQNQQQDL------PMRVYVGGLTGV 264
Query: 362 -FNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
++ E ++R++F PFG ++ +++ TG +GF FV ++R DAR A+ + I
Sbjct: 265 LIHLQESEIRKLFAPFGDIQCIEIAKSPYTGRPRGFAFVIYSRACDARVAIAAMHKYRIA 324
Query: 420 GRAIKVSAVTD--QSGLQDLGANTTGD 444
++V + + L NTT D
Sbjct: 325 DTTLEVGYLASAVNTALLSQMDNTTPD 351
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 8/206 (3%)
Query: 222 RDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
R + E+ +P KK +V+ D +T+F ++ D + F+ G+V R+
Sbjct: 283 RKAEGEAAKP-VKKVKVDEAADDSASTKTIFVGKLSWNVDNDWLESEFAECGEVVSARVQ 341
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
MDRN+ +S+G G+V F +V A+ L+G+ + G+P+ + S EK+ Q A A
Sbjct: 342 MDRNTGKSRGFGFVTFASPEAVDKALELNGKEIDGRPINIDKS-VEKDQNQVRERRAKAF 400
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
G T S + L+VGNL F+ TEDQL +VF +G+V+ V++P D E+G KGFG+V+F
Sbjct: 401 GDAT---SAPSSVLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEF 457
Query: 401 ARLEDARNAL-NLNGQLEIVGRAIKV 425
+E A+ A L GQ EI GRA+++
Sbjct: 458 EDVESAKKAHEGLAGQ-EIAGRAVRL 482
>gi|297727627|ref|NP_001176177.1| Os10g0439600 [Oryza sativa Japonica Group]
gi|255679439|dbj|BAH94905.1| Os10g0439600 [Oryza sativa Japonica Group]
Length = 237
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 238 VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
EPE DPERDQRTVFA+Q+ LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
Sbjct: 182 AEPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 237
>gi|308473552|ref|XP_003099000.1| hypothetical protein CRE_26714 [Caenorhabditis remanei]
gi|308267803|gb|EFP11756.1| hypothetical protein CRE_26714 [Caenorhabditis remanei]
Length = 294
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 92/154 (59%), Gaps = 10/154 (6%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
PK K ++ PE ERDQRT+ QI RD+ EFFS G VRDVR+I D + RSK
Sbjct: 127 PKNAKLELSPE---ERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSK 183
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG 350
G+ Y SVP+ +AL+GQ L+G P+ ++ + AE+N +NSS+A G +
Sbjct: 184 GICY------ESVPLGLALNGQRLMGAPLQIQRTCAERNRA-ANSSMASTLGFVAPGAAK 236
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQL 384
G + V NLH +TE+ +R++FE FG +E +++
Sbjct: 237 GPAHVLVENLHPKITENMIREIFESFGRIEKLEM 270
>gi|298708815|emb|CBJ30774.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 604
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 543 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVE-KDSAGFVYLRFENT 601
P+ CLL+KNMFDP ET E +++DIKE++E ECSK G + H +VE + G VY+ F T
Sbjct: 494 PTFCLLVKNMFDPATETDEGWELDIKEEMEEECSKHGAVMHSYVESRQPGGLVYVMFSTT 553
Query: 602 QSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPD 637
+A A+ L+GRWFAG+M+ ++ P+ Y AKFP+
Sbjct: 554 GAAVASAEMLNGRWFAGRMVLVEYLNPKVYTAKFPE 589
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 139/313 (44%), Gaps = 61/313 (19%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK--------------- 290
RDQRTVF Q+ +K E D+ ++F G+V +V ++ D+ + R K
Sbjct: 77 RDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGDAMRGRALPRHK 136
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLLGQ--PVMVKPSEAEKNLV-----QSNSSIAGASGG 343
G YVE + SVP+ + L+ + Q PVMVK SEAEKN + ++ + G
Sbjct: 137 GFAYVEMKSLESVPVVLQLNERVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPTGHVILG 196
Query: 344 GTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARL 403
+G +L++GNLH N+TED L ++ FG V + L DE G K F FV +A
Sbjct: 197 NAAALAG--LKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADT 254
Query: 404 EDARNALNLNGQLEIVGRAIKVSAV----------------------------------T 429
E L LE+ G+A+ VS
Sbjct: 255 ESTNACLEKLDGLEVAGKALSVSYCKADPKSIPKNLDANVTATAAAAAAATAHAASLAAA 314
Query: 430 DQSGLQDLGANTTGDFDDDEG-GGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNST 488
+G Q A++ DDDEG GG+ +++ +RA +M + G+A + + + +N
Sbjct: 315 TTAGQQSTAASSNWKLDDDEGAGGVKMDSTNRANIMSRF--GGAAMNMGLAGIPGMMNHA 372
Query: 489 ALPLPTAPLLGAA 501
LP + +G A
Sbjct: 373 TLPGMSGTGMGGA 385
>gi|401888136|gb|EJT52101.1| hypothetical protein A1Q1_06639 [Trichosporon asahii var. asahii
CBS 2479]
gi|406699204|gb|EKD02415.1| hypothetical protein A1Q2_03307 [Trichosporon asahii var. asahii
CBS 8904]
Length = 612
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 106/222 (47%), Gaps = 36/222 (16%)
Query: 241 EVDPERDQRTVFAYQICLKADERDVYEFFS-RAG--KVRDVRLIMDRNSRRSKGVGYVEF 297
EVD E R+VF Q+ D+ FF + G VRD R+I DR+SRRS+G+GYVE
Sbjct: 238 EVDSE--ARSVFVSQLAASLKSSDLGLFFEDKLGPRTVRDARIINDRHSRRSRGIGYVEL 295
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG----------- 346
V A+ALSG ++G P++V ++A N N A+
Sbjct: 296 ASTDLVSKALALSGTIVMGIPILVTLTDASSNPDGMNLGAILATLKAERRERRERIQQRR 355
Query: 347 --PYSGGAR------------------RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL 386
P S G + RL++ +L + + +RQVFEPFG +E V L
Sbjct: 356 FPPLSPGLQHRLGVDVNAHAEAALPYHRLFIADLAEVLNAEDIRQVFEPFGEIEFVDLHT 415
Query: 387 DETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 428
D TG KG ++QFA L A+ AL+ E+ + IKV +V
Sbjct: 416 DVTGTSKGTAYIQFAELNSAQMALDAMNNFELADKTIKVMSV 457
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 543 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGEC-SKFGKLKHIFVEKDS-AGFVYLRFEN 600
P+ LL+ NMF+P ET +D+D+ +DV+ E +K+G + I V+K S G VY+ F++
Sbjct: 518 PTTFLLVSNMFNPDEETERNWDIDLADDVKVEVENKYGHVARIKVDKMSNKGDVYIEFKD 577
Query: 601 TQSAFAAQRALHGRWFAGKMITATFM 626
A AQR L GR+F G+ +TA ++
Sbjct: 578 IDGAERAQRGLQGRFFGGRSLTAQYI 603
>gi|328866609|gb|EGG14992.1| putative RNA splicing factor [Dictyostelium fasciculatum]
Length = 637
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 71/97 (73%)
Query: 543 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQ 602
PS C++LKNMFDP +ET +E+ +I++DVE EC+ FG +KHIF+++ S G++YL+++N+
Sbjct: 539 PSPCMVLKNMFDPDSETGDEWPQEIQKDVEEECTNFGNIKHIFLDRYSQGYIYLKYDNSD 598
Query: 603 SAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
A A L+ RWF+ KM++A F+ Y KFP+++
Sbjct: 599 MAALAISKLNRRWFSSKMLSAEFIPETIYYQKFPEAL 635
>gi|297721815|ref|NP_001173271.1| Os03g0153000 [Oryza sativa Japonica Group]
gi|255674214|dbj|BAH91999.1| Os03g0153000, partial [Oryza sativa Japonica Group]
Length = 103
Score = 106 bits (264), Expect = 4e-20, Method: Composition-based stats.
Identities = 62/79 (78%), Positives = 68/79 (86%), Gaps = 7/79 (8%)
Query: 294 YVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
Y+EFYDVMSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN+S +GA+ SGGAR
Sbjct: 10 YIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAA-------SGGAR 62
Query: 354 RLYVGNLHFNMTEDQLRQV 372
+LYVGNLH N+TEDQLRQV
Sbjct: 63 KLYVGNLHSNITEDQLRQV 81
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 98/183 (53%), Gaps = 19/183 (10%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS 310
VF Q+ D + F G+V R++ DR+S++S+G GYVEF D+ + AI
Sbjct: 196 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEASAKAIEKD 255
Query: 311 GQPLLGQPVMV------KPSE-AEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
G + G+ + V KP+E AEK N S A L++G+L F+
Sbjct: 256 GSEIDGRAIRVNYATQRKPNEAAEKRAKVFNDK-----------QSPPAETLWIGSLSFS 304
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
+TEDQ+ + F G V+ V+LP D +TG KGFG+VQF+ +EDA AL EI GRA
Sbjct: 305 VTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNGAEIAGRA 364
Query: 423 IKV 425
I+V
Sbjct: 365 IRV 367
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 98/183 (53%), Gaps = 19/183 (10%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS 310
VF Q+ D + F G+V R++ DR+S++S+G GYVEF D+ S AI
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSSAKAIEKD 257
Query: 311 GQPLLGQPVMV------KPSE-AEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
G + G+ + V KP+E AEK N S A L++G+L F+
Sbjct: 258 GSEIDGRAIRVNYATQRKPNEAAEKRARVFNDK-----------QSPPAETLWIGSLSFS 306
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
+TEDQ+ + F G V+ V+LP D +TG KGFG+VQF+ ++DA AL EI GRA
Sbjct: 307 VTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAALKAMNGAEIAGRA 366
Query: 423 IKV 425
I+V
Sbjct: 367 IRV 369
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 177 REVIER--ERSRDREVIE-RERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKE 233
R V +R ++SR +E + + IE++ S E+ R R N R+P E
Sbjct: 226 RVVFDRDSQKSRGFGYVEFADLGSSAKAIEKDGS---EI----DGRAIRVNYATQRKPNE 278
Query: 234 KKEQVEPEVDPERD--QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
E+ + ++ T++ + E VYE F + G V+ VRL DR++ KG
Sbjct: 279 AAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKG 338
Query: 292 VGYVEFYDVMSVPMAI-ALSGQPLLGQPVMV 321
GYV+F V A+ A++G + G+ + V
Sbjct: 339 FGYVQFSSVDDATAALKAMNGAEIAGRAIRV 369
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 98/183 (53%), Gaps = 19/183 (10%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS 310
VF Q+ D + F G+V R++ DR+S++S+G GYVEF D+ S AI
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAIEKD 257
Query: 311 GQPLLGQPVMV------KPSE-AEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
G + G+ + V KP+E AEK N S A L++G+L F+
Sbjct: 258 GSEIDGRAIRVNYATQRKPNEAAEKRARVFNDK-----------QSPPAETLWIGSLSFS 306
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
+TEDQ+ + F G V+ V+LP D +TG KGFG+VQF+ ++DA AL EI GRA
Sbjct: 307 VTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRA 366
Query: 423 IKV 425
I+V
Sbjct: 367 IRV 369
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 98/183 (53%), Gaps = 19/183 (10%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS 310
VF Q+ D + F G+V R++ DR+S++S+G GYVEF D+ S AI
Sbjct: 195 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAIEKD 254
Query: 311 GQPLLGQPVMV------KPSE-AEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
G + G+ + V KP+E AEK N S A L++G+L F+
Sbjct: 255 GSEIDGRAIRVNYATQRKPNEAAEKRARVFNDK-----------QSPPAETLWIGSLSFS 303
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
+TEDQ+ + F G V+ V+LP D +TG KGFG+VQF+ ++DA AL EI GRA
Sbjct: 304 VTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRA 363
Query: 423 IKV 425
I+V
Sbjct: 364 IRV 366
>gi|294866432|ref|XP_002764713.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
gi|239864403|gb|EEQ97430.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
Length = 629
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 198/493 (40%), Gaps = 119/493 (24%)
Query: 162 ERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERES 221
E Y R+R ++ +L+ RE + +S
Sbjct: 237 EEYLR------------------------------------SRKRGKEEDLR-REHQHQS 259
Query: 222 RDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSR-AGKVRDVRL 280
R R RTV Q+ + +R VY S+ AGKVRDV++
Sbjct: 260 R----------------------SRASRTVLIAQLGMDVSDRTVYLLMSKMAGKVRDVQI 297
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPL---LGQPVMVKPSEAEKNLVQSNSSI 337
I D S+RSKG+ YVEF + S A+ + L LG ++PS+AEKNL S ++
Sbjct: 298 IRDGRSQRSKGIAYVEFEEQESAMKALGIEPTSLWTKLGHGANIQPSQAEKNL-NSTQAV 356
Query: 338 AGASGGGTGPYSGGARRLYVG---NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKG 394
SG RLYVG NL +++ED LR +F+PFG ++ V G
Sbjct: 357 LNPSGERVNEC-----RLYVGGSANLVADLSEDDLRALFQPFGPLDFVDRHPRNQGEGGT 411
Query: 395 FGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQD-----LGANTTGDF--DD 447
+ FVQ+ + AR+AL + I G+ +KV T + +G NT D D+
Sbjct: 412 YAFVQYGDSDHARSALKGLSGMMIGGKELKVGMATSAASAGLASSVVVGPNTDLDLVEDN 471
Query: 448 DEG----GGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASA 503
+EG GL + SRA LM+ + R P ++L + +A L A++
Sbjct: 472 EEGPSTHTGLLKDNLSRARLMRAMVRE------------PISEGSSLLMKSASRLPASNL 519
Query: 504 VSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEF 563
S A + V I + + L+ + E+F
Sbjct: 520 ASAAS----------------GAATGTGSRVLILRNLWAAGDQLMHEG-------GPEKF 556
Query: 564 DMDIKEDVEGECSKFGKLKHIFVEKDS-AGFVYLRFENTQSAFAAQRALHGRWFAGKMIT 622
+I DV+ E +FG + ++++ S G +LRF +A L+ RWFAG+ +
Sbjct: 557 FKEITNDVKSEAVRFGTIVGCWLDEASENGDCWLRFTTGSAAAKCALGLNRRWFAGRQLV 616
Query: 623 ATFMVPQTYEAKF 635
A + ++
Sbjct: 617 AVVVSEDKWDTGL 629
>gi|224117778|ref|XP_002331629.1| predicted protein [Populus trichocarpa]
gi|224149815|ref|XP_002339522.1| predicted protein [Populus trichocarpa]
gi|222837035|gb|EEE75414.1| predicted protein [Populus trichocarpa]
gi|222874025|gb|EEF11156.1| predicted protein [Populus trichocarpa]
Length = 125
Score = 104 bits (259), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/89 (58%), Positives = 66/89 (74%), Gaps = 6/89 (6%)
Query: 238 VEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
+EPE DP+RDQRTVFAY + LKA +R+ YEFFS+AGKV DVRLIM+RNSR SKGVG++EF
Sbjct: 1 MEPETDPKRDQRTVFAYHMYLKATKRNFYEFFSKAGKVMDVRLIMERNSRLSKGVGHIEF 60
Query: 298 YDVMSV------PMAIALSGQPLLGQPVM 320
YD +++ IA S LG P++
Sbjct: 61 YDELALLTQKINSTGIARSIAGCLGVPLL 89
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 5/182 (2%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
E +++F ++ D + + F+ G+V R+ MDRN+ +S+G GYVEF +V
Sbjct: 293 EEGTKSIFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTEAVE 352
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
A+ L+G+ + G+PV + SE +K+ + A G S L+VGNL ++
Sbjct: 353 AALLLNGKEIDGRPVNIDKSE-QKDKGAAREKRAEKFGDSASEPSA---VLFVGNLSWDC 408
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAI 423
TEDQ+ +VF G V+ V+LP D ETG KGFG+V+F +E A+ A E+ GR I
Sbjct: 409 TEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETAKKAFEGLSGTEVAGRPI 468
Query: 424 KV 425
++
Sbjct: 469 RL 470
>gi|195155759|ref|XP_002018768.1| GL25979 [Drosophila persimilis]
gi|194114921|gb|EDW36964.1| GL25979 [Drosophila persimilis]
Length = 289
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS-AGFVYLR 597
T + ++C +L NMFDP+ ET +D++I++DV EC+K G + HI V+ S G VY++
Sbjct: 172 TPSIATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTASPTGTVYVK 231
Query: 598 FENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+T +A A ALHGRWFAG++ITA ++ Y + FPDS+
Sbjct: 232 CPSTTTAVLAVNALHGRWFAGRVITAAYVPVVNYHSMFPDSV 273
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 76/120 (63%), Gaps = 9/120 (7%)
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA 409
G RLYVG+LHF++TE+ LR +FEPFG ++ +QL +D ET KG+GF+ + EDA+ A
Sbjct: 27 GPMRLYVGSLHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKA 86
Query: 410 L-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTG-DFDDDEGGGLSLNARSRALLMQKL 467
L LNG E+ GR +KV VT++ L NTT D D+ + G+ L A R LM KL
Sbjct: 87 LEQLNG-FELAGRPMKVGNVTER-----LDMNTTSLDTDEMDRTGIDLGATGRLQLMFKL 140
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 15/206 (7%)
Query: 222 RDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
R D+ + P +K + EP TVF + DE + F+ G V R+I
Sbjct: 162 RSADEAAEEPTKKPKTEEPV------NSTVFVGNLSWNVDEEMLAATFADCGTVESARII 215
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
D+ + R+KG GYV F ++ A+AL+G L G+ + V S K N
Sbjct: 216 TDKETGRAKGFGYVTFESADALTAAMALTGTELDGREIRVDVS-TPKPPRDGNR-----Q 269
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
G P S L++GNL FN+TED++R+ F +G + V+ P D +TG KGFG+V++
Sbjct: 270 GRKEAPQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEY 329
Query: 401 ARLEDARNAL-NLNGQLEIVGRAIKV 425
+E A+ A+ LNG +EI GR++++
Sbjct: 330 GDVETAQKAVEGLNG-VEIAGRSLRL 354
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 18/190 (9%)
Query: 243 DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMS 302
D + D +TVF ++ D + + F+ G+V R+ MDRN+ +S+G G+VEF
Sbjct: 315 DSQEDSKTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFATAEG 374
Query: 303 VPMAIALSGQPLL-GQPVMV-----KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLY 356
A+AL+GQ + G+ V + KP++ E+ A A G T S + L+
Sbjct: 375 ANAAVALNGQKEIDGRAVNLDKTSAKPADPERR--------AKAFGDST---SAPSSVLF 423
Query: 357 VGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQ 415
VGN+ F+MTED L +VF +G V+ V+LP D +T KG+G+V+F +E A+ A
Sbjct: 424 VGNVSFDMTEDGLWEVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKKAFEGARG 483
Query: 416 LEIVGRAIKV 425
+++ GR I++
Sbjct: 484 MDVGGRTIRL 493
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 6/183 (3%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
E + +T+F ++ D+ + F+ G+V R+ +DRN+ +S+G G+VEF D SV
Sbjct: 339 EEESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFADASSVQ 398
Query: 305 MAI-ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
AI ++G+ + G+PV V + N Q + A A G T S + L+VGNL ++
Sbjct: 399 KAIDTMNGKEIDGRPVNVDRAPG-LNKNQQRENRAKAFGDST---SAPSSVLFVGNLSWD 454
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
TED + + F G V+ V+LP D E+G KGFG+V+F ++ A+ A EI GR+
Sbjct: 455 ATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVDVDAAKAAFEALSGTEIGGRS 514
Query: 423 IKV 425
I++
Sbjct: 515 IRL 517
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 251 VFA------------YQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
F + A E V+E F G+V+ VRL DR S R KG GYVEF
Sbjct: 434 AFGDSTSAPSSVLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFV 493
Query: 299 DVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKN 329
DV + A ALSG + G+ + + S+ N
Sbjct: 494 DVDAAKAAFEALSGTEIGGRSIRLDYSQPRDN 525
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 13/212 (6%)
Query: 222 RDNDKESRRPKEKK----EQVEPEVDPERDQ--RTVFAYQICLKADERDVYEFFSRAGKV 275
R + E+ PK++K + V V D+ T+F ++ D + F G+V
Sbjct: 267 RKAEAEAPAPKKQKLTNGDAVSAPVPASNDEAVTTIFVGRLSWNVDNDWLKSEFEECGEV 326
Query: 276 RDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMV-KPSEAEKNLVQSN 334
R+ MDRN+ +S+G GYVEF +V A+ L+G+ + G+P+ V K + K+ V+ +
Sbjct: 327 VSARVQMDRNTGKSRGFGYVEFTSPDAVEAALKLTGKEIDGRPINVDKSTGVSKDKVRDS 386
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCK 393
+ A S + L+VGNL F+ +ED L + F +G V+ V++P D ETG K
Sbjct: 387 RAKAFGD-----QKSEPSSTLFVGNLSFSASEDVLWEAFASYGDVKGVRMPTDRETGQPK 441
Query: 394 GFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
GF +V F +E A+ A + ++I GRA+++
Sbjct: 442 GFAYVDFTDIESAKKAHDEGAGMDIAGRAVRL 473
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+F ++ D + + F+ G+V R+ MDRN+ +S+G GYV F V +V AIA
Sbjct: 44 KTIFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFATVEAVDAAIA 103
Query: 309 LSGQPLLGQPVMV-KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTED 367
+G+ + G+ V + K E +K V+ + A S + L+VGNL ++ TED
Sbjct: 104 QNGKEIDGRAVNIDKSIEKDKGAVRQKRAEAYGDKA-----SEPSSVLFVGNLSWDATED 158
Query: 368 QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
L + F +G ++ V++P D ETG KGF +V+F+ +E ++ A E+ GR I+V
Sbjct: 159 TLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKKAFEGAAGAEVAGRNIRV 217
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 103/181 (56%), Gaps = 10/181 (5%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-AL 309
+F + DE + F G++ VR++ DR+S RS+G GYVEF + A A
Sbjct: 267 LFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDAAKAFEAK 326
Query: 310 SGQPLLGQPVMVKPSEAEKNLVQS---NSSIAGASGGGTGPYSGGARRLYVGNLHFNMTE 366
G L G+P+ + + A +N + + + A + G T P S L++GN+ F E
Sbjct: 327 KGAELDGRPLNLDYANARQNAGGAKDRSQARAKSFGDQTSPES---DTLFIGNISFGADE 383
Query: 367 DQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIK 424
+ +++ F +GT+ ++LP D E+G KGFG++QF+ +++AR+ALN L G E+ GRA++
Sbjct: 384 NAIQETFSSYGTISGIRLPTDPESGRPKGFGYIQFSSVDEARSALNELQGS-ELAGRAMR 442
Query: 425 V 425
+
Sbjct: 443 L 443
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 225 DKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
D+ R K +Q PE D T+F I ADE + E FS G + +RL D
Sbjct: 352 DRSQARAKSFGDQTSPESD------TLFIGNISFGADENAIQETFSSYGTISGIRLPTDP 405
Query: 285 NSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPV 319
S R KG GY++F V A+ L G L G+ +
Sbjct: 406 ESGRPKGFGYIQFSSVDEARSALNELQGSELAGRAM 441
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 7/221 (3%)
Query: 207 SRDRELKEREKERESRDNDKES-RRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDV 265
+ D+ + +R++ D+D+ S ++ K + P + + VF Q+ D +
Sbjct: 284 AEDKPAPAKSGKRKAADDDEPSTKKVKLENGSAAPAGGDAQQSKAVFVGQLSWNVDNDWL 343
Query: 266 YEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSE 325
F+ G++ + MDRN+ +S+G GYV F V + A+ L+G+ + +P+ V S
Sbjct: 344 ASEFASCGEIESATVQMDRNTGKSRGFGYVHFTTVEAAQKALELNGKEIDNRPIKVDIS- 402
Query: 326 AEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLP 385
+N + A G T P S L+VGNL FN +ED + +F +G V+ V+LP
Sbjct: 403 TPRNPDAARQKRAQTFGDVTSPPS---NTLFVGNLSFNTSEDSVWSLFNDYG-VKSVRLP 458
Query: 386 LD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
D E+G KGFG+V+F +E A+ A N ++ GR I++
Sbjct: 459 TDRESGRPKGFGYVEFEDVEGAKKAFEANNGADLDGRPIRL 499
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 114/219 (52%), Gaps = 6/219 (2%)
Query: 209 DRELKEREKERESRDNDKESRRPKEKKEQVEPE-VDPERDQRTVFAYQICLKADERDVYE 267
D E+ E E + R D + P +K + + +D + + +++F ++ D + +
Sbjct: 292 DVEMAEPEPPKGKRKADTQDAVPAKKVKIANGDAMDVDNEIKSIFVGRLSWNVDNDWLAK 351
Query: 268 FFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAE 327
F+ G+V + MDR++ RS+G GYV F +V AI L+G+ + G+ V V S
Sbjct: 352 EFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAIELNGKEIDGRAVNVDKSNPP 411
Query: 328 KNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD 387
N S A G T P S L+VGNL F M +D L + F G V+ V+LP D
Sbjct: 412 -NKDASREKRAKTFGDTTSPPSA---TLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTD 467
Query: 388 -ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
E+G KGFG+V+F+ +E A+ A +E+ GR++++
Sbjct: 468 RESGRPKGFGYVEFSDVETAKKAHAAMQGVELDGRSVRL 506
>gi|313243412|emb|CBY42180.1| unnamed protein product [Oikopleura dioica]
Length = 250
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 81/134 (60%), Gaps = 14/134 (10%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RTV A Q+ E D+ +FFS G VR V+LI D +++G+ Y+EF V SVP
Sbjct: 126 ERDARTVIAMQLAHAIREFDLKDFFSSVGDVRAVKLIKD-ERHKTQGLAYIEFKHVQSVP 184
Query: 305 MAIALSGQPLLGQPVMVKPSEAEKN-----LVQSNSSIAGASGGGTGPYSGGARRLYVGN 359
+A+ L+GQ +LG+ ++V ++A+KN L Q+ ++ A GTGPY ++ V
Sbjct: 185 LAMGLTGQRVLGRAIVVHHAQADKNRHSEKLEQAKKNLMKA---GTGPY-----KIRVDK 236
Query: 360 LHFNMTEDQLRQVF 373
LH +TE+QL+ +
Sbjct: 237 LHKTVTEEQLKMIM 250
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 19/199 (9%)
Query: 234 KKEQVEPEVD--PERDQR-----TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
KK + E E+D P++ + T+FA + D+ +YE F G + R++ D+N+
Sbjct: 181 KKRKAEDEIDEAPKKAKSDDAPMTLFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKNT 240
Query: 287 RRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMV-----KPSEAEKNLVQSNSSIAGA 340
RS+G GYV+F D S A A+ GQ + G+ + + KP+E + Q ++
Sbjct: 241 GRSRGFGYVDFGDSESATKAYEAMQGQEIDGRALNLDYANAKPTEGKP---QDRAADRAK 297
Query: 341 SGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQ 399
G T S + L+VGNL F+ +D +RQ F V V+LP D ++G+ KGFG+V
Sbjct: 298 RHGDT--LSAESDTLFVGNLPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGFGYVT 355
Query: 400 FARLEDARNALNLNGQLEI 418
F +EDA++AL+ I
Sbjct: 356 FNSIEDAKSALDAKNGASI 374
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 30/215 (13%)
Query: 232 KEKKEQVEPEVDPERDQR-------TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
K++K + EPE ++ + +F + DE + F G ++ VR+I DR
Sbjct: 229 KKRKAEAEPEETSKKTKTEDPAATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDR 288
Query: 285 NSRRSKGVGYVEFYDVMSVPMAI-ALSGQPL--------LGQPVMVKPSEAEKN---LVQ 332
+S RSKG GYVEF A+ A G L LG P A++N Q
Sbjct: 289 DSGRSKGYGYVEFESADDAAKALEARHGYTLDNRELRVDLGTP------RAQRNDGQTPQ 342
Query: 333 SNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGH 391
S+ G T S + L+VGN+ F+ T+D + +VF+ +G++ V+LP D ETG
Sbjct: 343 QRSNDRQKQYGDTP--SQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGA 400
Query: 392 CKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKV 425
KGFG+V+F+ +E+A++A+ NL G ++I GR I++
Sbjct: 401 PKGFGYVEFSSIEEAKSAMENLTG-VDIAGRPIRL 434
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIAL 309
TVF + D + F+ G+V R+++DR+++RS+G GYVEF DV S AI
Sbjct: 205 TVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFADVDSAIKAIEF 264
Query: 310 SGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQL 369
G+ L G+ V V + A K + + S A L++G+L F+ TED +
Sbjct: 265 EGKELDGRAVRVNFANARKPDADKRAKVF------NDKRSPPADTLWIGSLPFDTTEDHI 318
Query: 370 RQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
+ F +G V+ V+LP D ETG KGFG+V F + A AL LNG E R I++
Sbjct: 319 YETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALEALNGS-EFGSRRIRI 375
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 110/208 (52%), Gaps = 16/208 (7%)
Query: 231 PKEKKEQVEPEVDPERDQR-------TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMD 283
PK++K + EP + ++ + +F + DE + F G++ VR++ +
Sbjct: 200 PKKRKAEEEPATNAKKSKTESADNSPNLFVGNLSWNVDEEWLRREFESFGELSGVRIMTE 259
Query: 284 RNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPV---MVKPSEAEKNLVQSNSSI-A 338
R + RS+G GYVE+ D S A A L G+ + KP +A + + A
Sbjct: 260 RETGRSRGFGYVEYADASSAKAAYEAKKDTELDGRTINLDYAKPRDANSQAPREKAQTRA 319
Query: 339 GASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGF 397
+ G T P S L+VGNL F + E+ +R+VFE G ++ V+LP D ETG KG+G+
Sbjct: 320 RSFGDQTSPES---NTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGRPKGYGY 376
Query: 398 VQFARLEDARNALNLNGQLEIVGRAIKV 425
V+F+ +++AR ALN +I GRAI++
Sbjct: 377 VEFSSVDEARQALNELQGTDIGGRAIRL 404
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 14/84 (16%)
Query: 225 DKESRRPKEKKE--------QVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
D S+ P+EK + Q PE + T+F + DE V E F G+++
Sbjct: 305 DANSQAPREKAQTRARSFGDQTSPESN------TLFVGNLVFGVDENAVREVFEGQGQIQ 358
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDV 300
VRL D + R KG GYVEF V
Sbjct: 359 GVRLPTDAETGRPKGYGYVEFSSV 382
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 104/180 (57%), Gaps = 9/180 (5%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+F + D + F++ G++ + DRN+ RS+G G+V F +V A+
Sbjct: 39 KTIFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGRSRGFGFVTFASPEAVDKALE 98
Query: 309 LSGQPLLGQPVMV-KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTED 367
L+G+ + G+ + V K E ++N V+ A G P S + RL+VGNL F+ TE+
Sbjct: 99 LNGKEIDGRSINVDKSVEKDQNQVRERR----ARTFGDAP-SEPSSRLFVGNLSFDATEE 153
Query: 368 QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKV 425
QL +VF +G+++ V +P ++G KGFG+V+F +E A+ A +L GQ EI GRAI++
Sbjct: 154 QLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIESAKKAHESLVGQ-EIAGRAIRL 212
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 244 PERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
P +F + A E ++E FS G ++ V + R+S R KG GYVEF D+ S
Sbjct: 134 PSEPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIESA 193
Query: 304 PMAI-ALSGQPLLGQPVMVKPSE 325
A +L GQ + G+ + ++ S+
Sbjct: 194 KKAHESLVGQEIAGRAIRLEFSQ 216
>gi|240274521|gb|EER38037.1| RNA splicing factor [Ajellomyces capsulatus H143]
Length = 537
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 133/338 (39%), Gaps = 96/338 (28%)
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDET-------GHCKGFGFVQFARLED 405
R ++V L + +L FE G V+ Q+ D G +G+GFVQF
Sbjct: 235 RTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGRGRSRGYGFVQFRDPNQ 294
Query: 406 ARNALNLNGQLEIVGRAIKVSAVTDQ---------------------------SGLQDLG 438
AR AL ++ GR I+V D+ SG G
Sbjct: 295 AREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRG 354
Query: 439 ANTTGD--------------------FDDDEGGGLSLNARSRALLMQKLDRSGSATTIAG 478
A G DD + G++ N SR LM+KL R+
Sbjct: 355 AQAGGSGHFDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTDE------ 408
Query: 479 SAVTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFD 538
PA+ T P + VP QV +P+
Sbjct: 409 ----PAIEPT---------------------PDEKRKVPKP--------QVNAKPLPV-- 433
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLR 597
++ + S C+LL+NMFDP E E + ++++DV EC K+G + HI ++ ++ G +YL+
Sbjct: 434 SVNMASRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNTQGDIYLK 493
Query: 598 FENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKF 635
F+ Q A + L+GR+F G+ I+A +V Y + F
Sbjct: 494 FDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYSSLF 531
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
Query: 239 EPEV-DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK------G 291
EP++ + ERD+RTVF Q+ + +++ FF + G V++ +++ DR S RSK G
Sbjct: 224 EPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGRGRSRG 283
Query: 292 VGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVK------PSEAEKNLVQ 332
G+V+F D A+ ++G L G+P+ V E+ NL+Q
Sbjct: 284 YGFVQFRDPNQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLQ 331
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 6/206 (2%)
Query: 227 ESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
E+ + +++ E+ + E D+R VF + KA E+D+ + F G + ++ L M+ +S
Sbjct: 3 EASKKRKEPEKAKKEDGAAGDKRRVFLGGLPFKATEKDIKKMFESCGAIENIELPMNADS 62
Query: 287 RRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG 346
R + G G++ F D SV A+A+ GQ L+G+ V VK ++ +
Sbjct: 63 RPA-GFGFLTFKDADSVAKAVAMDGQELMGRWVKVKEADGTEGSAGKKPFTPNRE---PK 118
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
P G +++GNL +++ ED +R F G V V+ D ETG KGFG VQFA
Sbjct: 119 PKPDGCTTIFMGNLSWDVDEDTIRSFFADCGEVVNVRFATDRETGDFKGFGHVQFAESSA 178
Query: 406 ARNALNLNGQLEIVGRAIKVSAVTDQ 431
A+ G+ + GRAI+V D+
Sbjct: 179 TDLAVAKGGEF-VAGRAIRVDFAEDR 203
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 16/208 (7%)
Query: 231 PKEKKEQVEPEVDPERDQR-------TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMD 283
PK++K + EP + ++ + +F + DE + F G++ VR++ +
Sbjct: 206 PKKRKAEEEPATNAKKSKTESADNSPNLFVGNLSWNVDEEWLRREFEEFGELSGVRIMTE 265
Query: 284 RNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPV---MVKPSEAEKNLVQSNS-SIA 338
R S RS+G GYVE+ D S A A + G+ + KP +A + + + A
Sbjct: 266 RESGRSRGFGYVEYADASSAKAAYEAKKDAEIDGRTINLDYAKPRDANNQAPREKAQNRA 325
Query: 339 GASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGF 397
+ G T P S L+VGNL F + E+ +R+VFE G ++ ++LP D ETG KG+G+
Sbjct: 326 RSFGDQTSPES---NTLFVGNLVFGVDENAVREVFEGQGQIQGIRLPTDAETGRPKGYGY 382
Query: 398 VQFARLEDARNALNLNGQLEIVGRAIKV 425
V+F+ +++AR ALN +I GRAI++
Sbjct: 383 VEFSSVDEARQALNDLQGTDIGGRAIRL 410
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI- 307
+++F ++ D+ + F+ AG+V R+ MDR + +SKG GYVEF D S A+
Sbjct: 272 KSIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKKAVE 331
Query: 308 ALSGQPLLGQPVMV------KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLH 361
++G+ + G+PV + P E+ S + S L+VGNL
Sbjct: 332 TMNGREIDGRPVNLDLATPRGPPNPERRAKAFGDSRSEPSA-----------TLFVGNLA 380
Query: 362 FNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVG 420
F+ T+D + ++F G V V+LP D ++G KGFG+V+FA +E A ALN G + G
Sbjct: 381 FSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEFADVETASKALNELGGTDFEG 440
Query: 421 RAIKV 425
R I++
Sbjct: 441 RNIRL 445
>gi|74137263|dbj|BAE22009.1| unnamed protein product [Mus musculus]
Length = 169
Score = 93.2 bits (230), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/97 (49%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 544 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQ 602
++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ +
Sbjct: 62 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIA 121
Query: 603 SAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 122 AAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 158
>gi|379318255|pdb|2LQ5|A Chain A, Nmr Structure Of The Rna Binding Motif 39 (Rbm39) From Mus
Musculus
Length = 113
Score = 93.2 bits (230), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/97 (49%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 544 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQ 602
++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ +
Sbjct: 6 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIA 65
Query: 603 SAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 639
+A AA ALHGRWFAGKMITA ++ TY FPDS+
Sbjct: 66 AAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 102
>gi|401406015|ref|XP_003882457.1| GA11385, related [Neospora caninum Liverpool]
gi|325116872|emb|CBZ52425.1| GA11385, related [Neospora caninum Liverpool]
Length = 564
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 137/293 (46%), Gaps = 39/293 (13%)
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQL-PLDETGH-CKGFGFVQFARLEDARNALN 411
R+Y+GN+ F + + L+++F FG + QL P E +G+GF+++A + A+ A+
Sbjct: 273 RVYIGNVPFGFSSEDLKKIFVVFGPILSCQLLPSQENPQQHRGYGFIEYATADAAKLAIE 332
Query: 412 LNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRSG 471
E+ G+ +KV+ T +G GG L + + A L+ L +G
Sbjct: 333 TMNGFEVAGKQLKVNFATAMRNSPVVGTPLASTLLPTMGG-LPGASPATAGLVPGLSPAG 391
Query: 472 S--ATTIAG-SAVTPAVNSTALPLPTAP--LLGAAS-------AVSTLVPPLVQGTVPTH 519
+ AT + G + +TP V P P AP L+GAA+ T PP V GT +
Sbjct: 392 ALGATAVGGLTGLTPGV-----PTPAAPGGLMGAAASPAATGAVAGTPAPPAVNGTSESA 446
Query: 520 PGQLGTALQ-------VPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVE 572
G Q +P A + S +LL NM P E D ++K++V
Sbjct: 447 GADGGKERQGEKEDEDLPPAPA----AADIHSRVVLLTNMVTPS-----EVDGELKDEVR 497
Query: 573 GECSKFGKLKHIFVE--KDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITA 623
ECSKFG +K + V KD+ +++ F + A A +LHGRWF G+ I A
Sbjct: 498 DECSKFGGIKRVEVHTLKDTV-RIFVEFSDLSGAREAIPSLHGRWFGGRQIIA 549
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLN 413
R+YVG+L + +TE +++ VF+ FGT+ V +P E KGF FV++A E A AL+
Sbjct: 78 RIYVGSLDYYLTELEIKSVFQAFGTIVSVDMP-KEGDRSKGFCFVEYASPEAAEMALSTM 136
Query: 414 GQLEIVGRAIKV 425
+ GR IKV
Sbjct: 137 QNFVLKGRTIKV 148
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 111/224 (49%), Gaps = 7/224 (3%)
Query: 214 EREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAG 273
E+ K ES+ E+ K+ VD +F I DE + F G
Sbjct: 207 EKPKAVESKKRKAEAEPAHATKKNKTDAVDESAPTGNLFVGNISWNVDEEWLTREFEEFG 266
Query: 274 KVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKN--- 329
++ VR+I DR+S RSKG GYVEF D + A+ A +G L G+ + + S N
Sbjct: 267 ELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKALEAKNGAELDGRELRLDFSTPRTNDGP 326
Query: 330 LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-E 388
+ S+ A G T + A L+VGN+ F+ E+ + + F+ GT++ V+LP D E
Sbjct: 327 GAGNKSNDRAARFGDT--TNAPAATLFVGNISFDADENAITEYFQEHGTIKAVRLPTDRE 384
Query: 389 TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQS 432
TG KGFG+V+ + +E+A+ A +I GR I++ ++S
Sbjct: 385 TGAPKGFGYVEMSSIEEAQAAFTALQGADIAGRPIRLDYAAERS 428
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 14/191 (7%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIAL 309
TVF ++ D+ + + F G V + R+IMD S RSKG GYV+F + A+A+
Sbjct: 207 TVFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRSKGFGYVDFDSPEAAKAAVAV 266
Query: 310 SGQPLL-GQPVMV-----KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
+GQ + G+ V + +P++ Q +S G S + +++GNL FN
Sbjct: 267 NGQKEIDGRMVNLDISTPRPAQNNNGFAQQRASNFGDK------QSPPSDTVFIGNLSFN 320
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
TED +R F G ++ V+LP D +G KGFG+V F ++ A+ + +NG I GR
Sbjct: 321 ATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTFDSIDAAKQCVEMNGHF-IAGRP 379
Query: 423 IKVSAVTDQSG 433
++ T ++G
Sbjct: 380 CRLDFSTPRTG 390
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF-YDVMSVPMAIAL 309
+F Q+ D+ + F + G V+ R+ +DR S RS+G GYVEF ++V
Sbjct: 207 IFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAVKAMDQF 266
Query: 310 SGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQL 369
+G+ + G+PV V S + + G S + L++GNL FN ED++
Sbjct: 267 AGKEIDGRPVRVDLSVPRAPNPEKRAKSFGDQ------RSDPSNTLFIGNLSFNTNEDRV 320
Query: 370 RQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAV 428
+ F FG+VE V++P D ETG KGFG+V FA ++ A+ A++ E+ GR I++
Sbjct: 321 WEFFGEFGSVESVRVPTDRETGAPKGFGYVSFADVDTAKAAIDGAAGSELDGRVIRLDFS 380
Query: 429 T 429
T
Sbjct: 381 T 381
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNL 412
+++VG L +N+ +D L+ FE G V+ ++ LD ++G +GFG+V+F E A A++
Sbjct: 206 QIFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAVKAMDQ 265
Query: 413 NGQLEIVGRAIKV 425
EI GR ++V
Sbjct: 266 FAGKEIDGRPVRV 278
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI 307
T+F + +E V+EFF G V VR+ DR + KG GYV F DV + AI
Sbjct: 305 TLFIGNLSFNTNEDRVWEFFGEFGSVESVRVPTDRETGAPKGFGYVSFADVDTAKAAI 362
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 102/185 (55%), Gaps = 7/185 (3%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
KK++ E + + T+F ++ D+ + F AG V R++++R++ +S+G G
Sbjct: 166 KKQKTEETPEASEEPATLFVGRLSWNVDDEWLKREFEEAGGVISARVMIERSTGKSRGYG 225
Query: 294 YVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA 352
YV+F + A+ L G+ + G+PV + S + SN A G P S +
Sbjct: 226 YVDFSSKAAAEKALNELQGKEIDGRPVNLDMSTGKPKTPASNDR---AKKFGDVP-SAPS 281
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN 411
L++GNL FN ++L ++F +GTV +LP +T KGFG+VQF+ +E+A+NALN
Sbjct: 282 DTLFIGNLSFNTERNKLFEIFGEYGTVVSCRLPTHPDTQQPKGFGYVQFSSVEEAQNALN 341
Query: 412 -LNGQ 415
LNG+
Sbjct: 342 SLNGE 346
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P KK + E + + +F + DE + F G++ VR++ DR+S RS+
Sbjct: 246 PVAKKVKKETADEASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSR 305
Query: 291 GVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKNLVQS---NSSIAGASGGGTG 346
G GYVEF + A A + G+ + + + A +N + S A + G T
Sbjct: 306 GFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFANARQNAGGARDRAQSRAKSFGDQTS 365
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
P S L++GN+ FN E+ +++ F G++ ++LP D E+G KGFG+VQF+ +++
Sbjct: 366 PES---DTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDE 422
Query: 406 ARNALNLNGQLEIVGRAIKV 425
AR+A N E+ GRA+++
Sbjct: 423 ARSAFNALQGTELAGRAMRL 442
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P KK + E + + +F + DE + F G++ VR++ DR+S RS+
Sbjct: 244 PVAKKVKKETADEASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSR 303
Query: 291 GVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKNLVQS---NSSIAGASGGGTG 346
G GYVEF + A A + G+ + + + A +N + S A + G T
Sbjct: 304 GFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFANARQNAGGARDRAQSRAKSFGDQTS 363
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
P S L++GN+ FN E+ +++ F G++ ++LP D E+G KGFG+VQF+ +++
Sbjct: 364 PES---DTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDE 420
Query: 406 ARNALNLNGQLEIVGRAIKV 425
AR+A N E+ GRA+++
Sbjct: 421 ARSAFNALQGTELAGRAMRL 440
>gi|158429066|pdb|2JRS|A Chain A, Solution Nmr Structure Of Caper Rrm2 Domain. Northeast
Structural Genomics Target Hr4730a
Length = 108
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDAR 407
S G RLYVG+LHFN+TED LR +FEPFG +E +QL +D ETG KG+GF+ F+ E A+
Sbjct: 23 SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAK 82
Query: 408 NAL-NLNGQLEIVGRAIKVSAVTDQS 432
AL LNG E+ GR +KV VT+++
Sbjct: 83 KALEQLNG-FELAGRPMKVGHVTERT 107
>gi|297744587|emb|CBI37849.3| unnamed protein product [Vitis vinifera]
Length = 228
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
Query: 1 MDFDEYEYLEKMVENPEPAKEKETAN-GDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHR 59
MDFDEY+YLEK VENPE K KET N GD VKS ++ RSRSSK KS++ +D D R
Sbjct: 1 MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRLKR 60
Query: 60 SRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSS 98
SKS D+SR+HDRRKER SS RS SRDG RDR RSS
Sbjct: 61 ---SKSGDDSRDHDRRKERGSSHPRSSSRDGERDRHRSS 96
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 10/204 (4%)
Query: 232 KEKKEQVEPEVDPERDQR-------TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
K++K EPE P++ + +F + DE + F G+++ VR+I DR
Sbjct: 221 KKRKADEEPEQSPKKAKTEDPNVTGNLFIGNLSWNVDEEWLTREFEEFGELKGVRIITDR 280
Query: 285 NSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGG 343
+S RSKG GYVEF + A+ A +G L + + + S +N Q+
Sbjct: 281 DSGRSKGFGYVEFENAEDAAKALEAKNGAELDNRAIRLDFSVPRQNNAQNPQQRGQERRQ 340
Query: 344 GTG-PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFA 401
G S ++ L+VGNL F+ TED +R+ FE G++ ++LP D E+G KGFG+V+
Sbjct: 341 QYGDKASEPSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESGAPKGFGYVEMG 400
Query: 402 RLEDARNALNLNGQLEIVGRAIKV 425
+++A+ A ++ GR +++
Sbjct: 401 SIDEAKAAYEALQGADLGGRPMRL 424
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 96/178 (53%), Gaps = 10/178 (5%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-L 309
+F ++ D+ + F G+V + MDR + RSKG GYV F + AIA +
Sbjct: 393 IFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAEM 452
Query: 310 SGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQL 369
+G+ + G+ V V + + N + G T S ++ L+VGN+ FN ED L
Sbjct: 453 NGKEIDGRAVNVNAATPK----TPNPAGRAKQFGDT--VSAESKVLFVGNVSFNANEDML 506
Query: 370 RQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
+ F G + V+LP D ETG KGFG+V+F +E+A++A N LNG+ +I GR I++
Sbjct: 507 WETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAFNALNGK-DIAGRNIRL 563
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 247 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMA 306
+ + +F + A+E ++E F G + VRL DR + + KG GYVEF V + A
Sbjct: 488 ESKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSA 547
Query: 307 I-ALSGQPLLG 316
AL+G+ + G
Sbjct: 548 FNALNGKDIAG 558
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 9/197 (4%)
Query: 230 RPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRS 289
+P+ KK +++P PE ++F Q+ D + + FS G+V + +DRN+ RS
Sbjct: 292 QPEAKKVKLDPAT-PE--TLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRS 348
Query: 290 KGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYS 349
+G GYV F +V A+ ++G + G+ + V S N Q A P S
Sbjct: 349 RGFGYVHFSTADAVEKALKMNGYEIDGRAIKVDLS-TPPNSNQIRERRAKVFNDEISPPS 407
Query: 350 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARN 408
L++GNL F++TED L F+ +V+ ++LP D ETG KGFG+V+ +EDA+
Sbjct: 408 S---TLFIGNLPFSITEDGLWSYFDGH-SVKTIRLPTDRETGQLKGFGYVELENVEDAKK 463
Query: 409 ALNLNGQLEIVGRAIKV 425
A EI GR ++V
Sbjct: 464 AFEAISGQEIEGRRVRV 480
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 9/197 (4%)
Query: 230 RPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRS 289
+P+ KK +++P PE ++F Q+ D + + FS G+V + +DRN+ RS
Sbjct: 292 QPEAKKVKLDPAT-PE--TLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRS 348
Query: 290 KGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYS 349
+G GYV F +V A+ ++G + G+ + V S N Q A P S
Sbjct: 349 RGFGYVHFSTADAVEKALKMNGYEIDGRAIKVDLS-TPPNSNQIRERRAKVFNDEISPPS 407
Query: 350 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARN 408
L++GNL F++TED L F+ +V+ ++LP D ETG KGFG+V+ +EDA+
Sbjct: 408 S---TLFIGNLPFSITEDGLWSYFDGH-SVKTIRLPTDRETGQLKGFGYVELENVEDAKK 463
Query: 409 ALNLNGQLEIVGRAIKV 425
A EI GR ++V
Sbjct: 464 AFEAISGQEIEGRRVRV 480
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 103/200 (51%), Gaps = 15/200 (7%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
K K E+V PE +F + DE V FS G++ VR++ DR + RS+G
Sbjct: 199 KSKTEEV-----PEGAVANLFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRETGRSRG 253
Query: 292 VGYVEFYD-VMSVPMAIALSGQPLLGQPV---MVKPSEAEKNLVQSNSSIAGASGGGTGP 347
GYVE+ + A G L G+ + P +A + A + G T P
Sbjct: 254 FGYVEYNSAADAAKAMEAKKGTDLDGRTINLDYAAPRQANTQGADRSQDRARSYGDQTSP 313
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDA 406
S L+VGNL F+ TED L +VF G+V ++LP + ETG KGFG+VQF+ +++A
Sbjct: 314 ES---DTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEA 370
Query: 407 RNA-LNLNGQLEIVGRAIKV 425
+ A LNG E+ GRAI++
Sbjct: 371 KAAHAALNGH-ELEGRAIRL 389
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 105/197 (53%), Gaps = 14/197 (7%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
KK +VEP + +F + DE + F G++ VR++ DR+S RSKG G
Sbjct: 221 KKTRVEP-----TEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFG 275
Query: 294 YVEFYDVM-SVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG--TGPYSG 350
YVEF + +V A L G+ + V + A N + + + A G P S
Sbjct: 276 YVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFGDQKSPES- 334
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA 409
L++GN+ F+ E + + F +G++ V+LP D E+G KGFG+VQF+ +++AR+A
Sbjct: 335 --DTLFIGNIAFSADESMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSA 392
Query: 410 L-NLNGQLEIVGRAIKV 425
+LNG E+ GRA+++
Sbjct: 393 FESLNGS-ELAGRAMRL 408
>gi|346321757|gb|EGX91356.1| nucleolin protein Nsr1, putative [Cordyceps militaris CM01]
Length = 438
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 12/168 (7%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-A 308
T+FA + D+ +YE F + R++ D+N+ RS+G GYV+F D S A A
Sbjct: 182 TLFAGSLSWGVDDNALYEAFKSFSGLVHARVVTDKNTGRSRGFGYVDFADSESATKAYEA 241
Query: 309 LSGQPLLGQPVMV-----KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
+ GQ + G+ + + KP+E++ Q ++ + G T S + L+VGNL F+
Sbjct: 242 MQGQEVDGRALNLDYANAKPAESKP---QDRAADRASRHGDT--LSAESETLFVGNLPFD 296
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
+D +R+ F V ++LP D E+G+ KGFG+V F ++DA+ AL
Sbjct: 297 TEQDAVREFFGEVAEVASIRLPTDPESGNLKGFGYVTFNSIDDAKTAL 344
>gi|320591904|gb|EFX04343.1| nucleolin protein [Grosmannia clavigera kw1407]
Length = 413
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 214 EREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAG 273
E E ++ + +D+E K+ K + E E T+F + D+ +Y+ F
Sbjct: 136 EEEPSKKRKADDEEPAAAKKAKTEEEGET-----SSTLFVGNLSWNVDDSVLYDEFKGFD 190
Query: 274 KVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSE--AEKNL 330
+ R+I DR ++RS+G GYVEF V A ++G L G+ + + S A+ N
Sbjct: 191 GLTGARVITDRETQRSRGFGYVEFDSVEHAQAAFDKMTGYFLDGRELKIDFSTGRAKSND 250
Query: 331 VQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ET 389
+S A G T P S L+VGNL F+ E+ + F V+ ++LP D E+
Sbjct: 251 ANPAASRAKKYGDVTSPESD---TLFVGNLSFDADEETVSAFFSEVANVKSLRLPTDMES 307
Query: 390 GHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
G KGFG+V F LED++ A + LNGQ GR +++
Sbjct: 308 GRPKGFGYVSFYSLEDSKKAFDTLNGQ-SCAGRNVRL 343
>gi|138752960|emb|CAM35485.1| RNA binding motif protein 39 [Sus scrofa]
Length = 93
Score = 87.8 bits (216), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 545 ECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQS 603
+C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +
Sbjct: 1 QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAA 60
Query: 604 AFAAQRALHGRWFAGKMITATFMVPQTYEAKFP 636
A AA ALHGRWFAGKMITA ++ TY FP
Sbjct: 61 AIAAVNALHGRWFAGKMITAAYVPLPTYHNLFP 93
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 14/213 (6%)
Query: 222 RDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
+ +D+E K+ K +VE + + +F + D+ +Y F G++ R+I
Sbjct: 170 KADDEEETAAKKSKTEVE-----DTGSKNLFVGNLSWNIDDEWLYREFEEFGEITGARVI 224
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLL-GQPVMVKPSEAEKNLVQSNSSIAGA 340
DR S RSKG GYVEF + A+ L+ G+ V S N + + A A
Sbjct: 225 SDRESGRSKGFGYVEFANSADAAAALKAKKGALIDGREANVDFSTPRDNAAPKDRANARA 284
Query: 341 S--GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGF 397
G P S L+VGN+ F ED L + F GTV V+LP D ++G+ KGFG+
Sbjct: 285 QTYGDAKNPES---DTLFVGNISFEANEDMLGEAFGAHGTVVNVRLPTDMDSGNPKGFGY 341
Query: 398 VQFARLEDARNAL-NLNGQLEIVGRAIKVSAVT 429
+ F+ +EDA+NA+ N+ G ++ GR +++ T
Sbjct: 342 ITFSSVEDAKNAMENMMGA-DVGGRPVRLDYAT 373
>gi|384483165|gb|EIE75345.1| hypothetical protein RO3G_00049 [Rhizopus delemar RA 99-880]
Length = 366
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 115/215 (53%), Gaps = 24/215 (11%)
Query: 229 RRPKEKKEQVE-PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSR 287
R+ +E++E++ P+ + T++ I +A DV EFF G+++DVR+ +D +
Sbjct: 118 RKAEEEQEEIPVPKAAKTEENYTIWCGGISFEATADDVREFFGECGEIKDVRIRIDEATG 177
Query: 288 RSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGP 347
+++G +++F + A+ALSG LG+ + + ++ K ++N+S GP
Sbjct: 178 KNRGFCHIDFATQEAKDAAVALSGNEFLGRRIRIDGADGGK---KTNTS---------GP 225
Query: 348 YSGGARRLYVGNLHFNMTED----QLRQVFEPFGT-VELVQLPLD-ETGHCKGFGFVQFA 401
S ++++V NL+ + ED L + F+ FGT V ++LP + E+G KG G+++F
Sbjct: 226 AS-ATKKVFVANLNRDYDEDAHRTALTEAFQEFGTIVGDIRLPYNRESGALKGIGYIEFE 284
Query: 402 RLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQD 436
E A A+ +EI GR ++ TD SG D
Sbjct: 285 TTEQAEAAVKGMNGVEINGRPLR----TDFSGDND 315
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 6/169 (3%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+FA ++ D+ + F V R+IM+R + +S+G GYV+F + AIA
Sbjct: 256 TIFAGRLSWNIDDDWLKREFEHLEGVISARVIMERATGKSRGYGYVDFSSKSAAENAIAE 315
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
+ G+ + G+P+ + S + + +SN+ A G P S L++GNL FN D+
Sbjct: 316 MQGKEIDGRPINLDLSTGKPHATKSNNDRARQFGDQQSPPSD---TLFIGNLSFNANRDK 372
Query: 369 LRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQ 415
L +VF +G V +LP +T KGFG+VQF+ +++A+ AL LNG+
Sbjct: 373 LFEVFGEYGNVISCRLPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGE 421
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 103/200 (51%), Gaps = 15/200 (7%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
K K E+V PE +F + DE + FS G++ VR++ DR + RS+G
Sbjct: 269 KSKTEEV-----PEGAVANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRETGRSRG 323
Query: 292 VGYVEFYD-VMSVPMAIALSGQPLLGQPV---MVKPSEAEKNLVQSNSSIAGASGGGTGP 347
GYVE+ + A G L G+ + P +A + A + G T P
Sbjct: 324 FGYVEYNSAADAAKAMEAKKGTDLDGRTINLDYAAPRQANTQGADRSQDRARSYGDQTSP 383
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDA 406
S L+VGNL F+ TED L +VF G+V ++LP + ETG KGFG+VQF+ +++A
Sbjct: 384 ES---DTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEA 440
Query: 407 RNA-LNLNGQLEIVGRAIKV 425
+ A LNG E+ GRAI++
Sbjct: 441 KAAHAALNGH-ELEGRAIRL 459
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 26/238 (10%)
Query: 203 ERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADE 262
E +R RD E E +S D E K+ K P F + A+E
Sbjct: 144 ENKRKRDEE----ENGDDSSTGDAEESNTKKAKTDETPS------NANFFIGNLPWSAEE 193
Query: 263 RDVYEFFSRAG--KVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVM 320
V +FF G V VRLI DR++ R KG GY+E V +AL+G G+ +
Sbjct: 194 DTVKQFFESQGVSAVYAVRLITDRDTGRKKGFGYIE-TSASDVDAVLALNGADFEGRELK 252
Query: 321 V-----KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEP 375
V +P+ A+++ ++ G +++GNL FN TED + E
Sbjct: 253 VDKANERPANADRDTKPRDAPRQSGEAATDG-------NVFLGNLSFNSTEDSIWAALEQ 305
Query: 376 FGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQS 432
FGTV+ V++ D ET +GFG+ +F + A A+ +G +++ GR I++ T +S
Sbjct: 306 FGTVKAVRIVYDRETQRPRGFGYCEFEDADTANKAIAASGTVDVDGRQIRIDTATARS 363
>gi|340708259|pdb|3S6E|A Chain A, Crystal Structure Of A Rna Binding Motif Protein 39
(Rbm39) From Mus Musculus At 0.95 A Resolution
gi|340708260|pdb|3S6E|B Chain B, Crystal Structure Of A Rna Binding Motif Protein 39
(Rbm39) From Mus Musculus At 0.95 A Resolution
Length = 114
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 544 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQ 602
++C L N F+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ +
Sbjct: 7 TQCFQLSNXFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIA 66
Query: 603 SAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 638
+A AA ALHGRWFAGK ITA ++ TY FPDS
Sbjct: 67 AAIAAVNALHGRWFAGKXITAAYVPLPTYHNLFPDS 102
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS 310
VF Q+ D + + F+ G++ + MDRN+ +S+G GYV F +V A+ ++
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIESATVQMDRNTGKSRGFGYVHFTTPDAVEKALQMN 60
Query: 311 GQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG-PYSGGARRLYVGNLHFNMTEDQL 369
GQ + G+ + V +++L + S + G S + L+VGNL F +TED +
Sbjct: 61 GQEIDGRAIKV-----DRSLPRDKSQVREKRAQAFGDEVSAPSSTLFVGNLSFGVTEDTV 115
Query: 370 RQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
F +G V+ V+LP D ETG KGFG+V+F ++ A+ A EI GR+I++
Sbjct: 116 WSFFNDYG-VKSVRLPTDRETGRPKGFGYVEFEDIDGAKKAFEAANGSEIEGRSIRL 171
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 231 PKEKKEQVEPEVDPER-------DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMD 283
PK++K + EP ++ + +F + DE + F G++ VR++ +
Sbjct: 199 PKKRKAEEEPATSAKKSKTESADNSSNLFIGNLSWNIDEEWLRREFESFGELSGVRIMTE 258
Query: 284 RNSRRSKGVGYVEFYDVMSVPMAIALSGQPLL-GQPV---MVKPSEAEKNLVQSNSSI-A 338
R + RS+G GYVE+ D S A L G+ + KP +A + + A
Sbjct: 259 RETGRSRGFGYVEYADAASAKAAYEAKKDTELDGRTINLDYAKPRDANAQAPREKAQTRA 318
Query: 339 GASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGF 397
+ G T P S L++GNL F + E+ +R+VFE GT++ ++LP D ETG KG+G+
Sbjct: 319 RSFGDQTSPES---NTLFLGNLVFGVDENAVREVFESQGTIQGIRLPTDPETGRPKGYGY 375
Query: 398 VQFARLEDARNALNLNGQLEIVGRAIKV 425
V+F+ +++AR ALN +I GRAI++
Sbjct: 376 VEFSSVDEARQALNDLQGTDIGGRAIRL 403
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 14/84 (16%)
Query: 225 DKESRRPKEKKE--------QVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
D ++ P+EK + Q PE + T+F + DE V E F G ++
Sbjct: 304 DANAQAPREKAQTRARSFGDQTSPESN------TLFLGNLVFGVDENAVREVFESQGTIQ 357
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDV 300
+RL D + R KG GYVEF V
Sbjct: 358 GIRLPTDPETGRPKGYGYVEFSSV 381
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 9/205 (4%)
Query: 226 KESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN 285
K P ++ + E PE +F + DE + FS G++ VR++ DR
Sbjct: 229 KADEEPAAAAKKSKTEDAPEGASANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRE 288
Query: 286 SRRSKGVGYVEFYD-VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSI--AGASG 342
S RS+G GYVE+ + A G L G+ + + + + Q + + A + G
Sbjct: 289 SGRSRGFGYVEYTSAADAAKAMEAKKGTDLDGRTINLDYAAPRQANPQQDRTQDRARSYG 348
Query: 343 GGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFA 401
T P S L+VGNL F+ TED L +VF G+V ++LP + ETG KGFG+VQF+
Sbjct: 349 DQTSPES---DTLFVGNLPFSATEDALHEVFGAHGSVLGIRLPTEQETGRPKGFGYVQFS 405
Query: 402 RLEDARNALN-LNGQLEIVGRAIKV 425
+++A+ A LNG E+ GRA+++
Sbjct: 406 SIDEAKAAHGALNGH-ELEGRAVRL 429
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 99/178 (55%), Gaps = 5/178 (2%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+++F ++ D + + F+ G+V R+ MDRN+ +S+G YV F + A+
Sbjct: 314 KSIFVGRLSWNVDNEWLAQEFADCGEVVSARVQMDRNTGKSRGFAYVTFATAEAAQAALQ 373
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
L+G+ + G+PV + E++ + + A A G S + L+VGNL F+ TED
Sbjct: 374 LTGKEIDGRPVNID-MTTERDPNAARQNRAAAYGDKP---SEPSAVLFVGNLSFSATEDL 429
Query: 369 LRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
L + F +G V+ V++P D ETG KGF +V+F+ +E A++A EI GRA+++
Sbjct: 430 LWETFSEYGDVKSVRVPTDRETGSPKGFAYVEFSDVETAKSAYEGVSGKEIAGRAVRL 487
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 217 KERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
K+R+S D+ R K++K Q + + D + T+F ++ D+ + F G V
Sbjct: 180 KKRKSTDSANLDRS-KDEKSQKKHKKDSPTEPATIFVGRLSWSIDDEWLKTEFEHIGGVI 238
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNS 335
R+I +R + RS+G GYV+F D AI + G+ + G+P+ V S ++ SN
Sbjct: 239 SARVIYERGTERSRGYGYVDFEDKSYAEKAIKEMQGKEIDGRPINVDMSTSKP---ASNP 295
Query: 336 SIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKG 394
A G P S + L++GNL FN D + ++F+ +G++ V++P ET KG
Sbjct: 296 KEDRAKKFGDVP-SQPSDTLFLGNLSFNADRDNIFELFKDYGSIISVRIPTHPETNQPKG 354
Query: 395 FGFVQFARLEDARNALN-LNGQL 416
FG+VQ+A +E+A+ AL+ L G+
Sbjct: 355 FGYVQYASIEEAQKALDKLQGEY 377
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 227 ESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
E+ P KK + E + +F + DE + F G++ R+I DR +
Sbjct: 212 EAAEPAIKKTKTVEEPAGAEGIKNLFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRET 271
Query: 287 RRSKGVGYVEFYDVMSVPMAIALSGQPLL-GQPVMVKPSEAEKNLVQSNSSIAGASGGGT 345
R KG GYVEF A A Q L G+P+ V S + AG +
Sbjct: 272 GRGKGFGYVEFATSADAAKAQAEMHQYELDGRPLNVDFSTPRQK------PDAGKTNDRA 325
Query: 346 GPY----SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
Y S + L++GNL F+ T D ++++F +G + V LP D +TG KGFG+V F
Sbjct: 326 NKYGDKRSAPSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDF 385
Query: 401 ARLEDARNALN-LNGQLEIVGRAIKV 425
E+A AL+ LNGQ +I GR I++
Sbjct: 386 GSQEEATAALDALNGQ-DIAGRNIRI 410
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 242 VDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVM 301
D E QRTVF + DE + FF G +RD+RL+ + S +SKG Y+EF +
Sbjct: 683 FDVEAAQRTVFVKNLDFAVDEDMLQMFFKDCGAIRDIRLVR-KPSGQSKGFAYIEFEEKS 741
Query: 302 SVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLH 361
S+ A++ Q + G+PV+V P + +S +++ G P R ++V L
Sbjct: 742 SLAFALSKDRQFMNGRPVLVDPC-----VDRSKTALRPKHQTGFDP-----RTVFVKRLD 791
Query: 362 FNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGR 421
+ TE +R +FE +G V+ V++ G +GF +V+F DA A+ + E GR
Sbjct: 792 HSCTEQDVRTLFEQYGAVKEVRMVTTLAGKPRGFAYVEFEASRDAATAIMNLDKAEFKGR 851
Query: 422 AIKVS 426
++V+
Sbjct: 852 QLQVA 856
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 228 SRRPKEKKEQVEPEVDPERDQRTV----------FAYQICLKADERDVYEFFSRAGKVRD 277
+ +P++KK + E E +P + V FA + DE + F G++
Sbjct: 202 AEKPQQKKRKAEEEPEPAAKKAKVNLPDGASANLFAGNLSWNVDEEWLRSEFEEFGELVG 261
Query: 278 VRLIMDRNSRRSKGVGYVEFYDVM-SVPMAIALSGQPLLGQPVMVKPSEAEKNLV----Q 332
R++ DR S RS+G GYVEF +V +V A L G+ + + + A N +
Sbjct: 262 ARIVTDRESGRSRGFGYVEFANVEDAVKAHAAKKDAELDGRKLNLDFANARTNAGGNPRE 321
Query: 333 SNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGH 391
S A + G T P S L++GNL F+ E+ ++++F G++ ++LP D ++G
Sbjct: 322 RADSRAKSFGDQTSPES---DTLFLGNLPFSADENAVQELFSKHGSILGIRLPTDPDSGR 378
Query: 392 CKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
KGFG+VQF+ +++AR AL ++ GRAI++
Sbjct: 379 PKGFGYVQFSSVDEARAALEAEYGADLGGRAIRI 412
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 14/207 (6%)
Query: 222 RDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
R D+E++ P KK + + E +P + V+ + D + F G+V + R++
Sbjct: 189 RKADQEAQAP-AKKSRTDGEAEPTAN---VYVGGLSWNVDNEWLASEFQSCGEVVEARVM 244
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVK-PSEAEKNLVQSNSSIAGA 340
D +++SKG G+V F A+A++G + G+ + +E N V+ +
Sbjct: 245 FDHQNQKSKGFGFVRFKTAEEAAKAVAMTGHEIDGRAIRCDFAAEKTDNPVERRAQKFND 304
Query: 341 SGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQ 399
S A LY+G L +++ ED + + F FG ++ V LP D ETG KGFG+V+
Sbjct: 305 Q------RSAPAATLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVE 358
Query: 400 FARLEDARNALN-LNGQLEIVGRAIKV 425
FA ++ A AL +NG+ E+ GR I+V
Sbjct: 359 FADVDQATAALEAMNGK-ELSGRRIRV 384
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 227 ESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
E P KK +V+ PE +F + DE + F G++ R++ DR S
Sbjct: 219 EDAEPVAKKAKVD---VPEGASANLFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRES 275
Query: 287 RRSKGVGYVEFYDVM-SVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSI-------A 338
RS+G GYVEF +V +V A L G+ + + + A N N++ A
Sbjct: 276 GRSRGFGYVEFVNVEDAVKAHTAKKDAELDGRKMNLDYANARTN---GNANPRERADNRA 332
Query: 339 GASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGF 397
+ G T P S L++GN+ F+ E+ ++++F +G ++ ++LP D E+G KGFG+
Sbjct: 333 KSFGDQTSPES---DTLFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGY 389
Query: 398 VQFARLEDARNALNLNGQLEIVGRAIKV 425
VQF+ +++AR AL ++ GR+I++
Sbjct: 390 VQFSSVDEARAALEAEHGADLGGRSIRL 417
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 132 RRERDHDTDRDREK-DKEKEREKSHRSGSQS-----ERYRSDRDE-RERSRDREVIERER 184
+ E D + + K D + + G+ S E RS+ +E E + R V +RE
Sbjct: 216 KAEEDAEPVAKKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRES 275
Query: 185 SRDREVIERERSRDREVIERERS-RDRELKEREKERE---SRDN------DKESRRPKEK 234
R R E + ++ + +D EL R+ + +R N ++ R K
Sbjct: 276 GRSRGFGYVEFVNVEDAVKAHTAKKDAELDGRKMNLDYANARTNGNANPRERADNRAKSF 335
Query: 235 KEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY 294
+Q PE D T+F I ADE V E FS+ G ++ +RL D S R KG GY
Sbjct: 336 GDQTSPESD------TLFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGY 389
Query: 295 VEFYDV 300
V+F V
Sbjct: 390 VQFSSV 395
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 11/183 (6%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI--- 307
+F + DE + F G++ VR++ +R++ RS+G GYVE+ + + A
Sbjct: 282 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 341
Query: 308 ---ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+ G+ + +P+ E+ Q + S G S + L+VGN+ F+
Sbjct: 342 RDTEIDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQA--SPESDTLFVGNIPFSA 399
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRA 422
ED L +VF G++ ++LP D E+G KGFG+VQF+ +E+AR A N LNG EI GR
Sbjct: 400 NEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREAFNELNG-AEIDGRP 458
Query: 423 IKV 425
+++
Sbjct: 459 VRL 461
>gi|298710792|emb|CBJ32209.1| RNA-binding protein SiahBP [Ectocarpus siliculosus]
Length = 696
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 247 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMA 306
+ R ++ + + E D+ F+ G ++ V + D ++ R KG ++E+ DV S A
Sbjct: 285 NPRRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAA 344
Query: 307 I-ALSGQPLLGQPV------------------------MVKPSEAEKNLVQSNSSIAGAS 341
+ A++G L G+ + M P A S S+ GA
Sbjct: 345 LRAMNGFELAGRAIKVGRPLNTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAGGAQ 404
Query: 342 GGGT---------GPYSGGAR-RLYVGNLHFNMTEDQLRQVFEPFGTV---ELVQLPLDE 388
G G G + A+ ++YVGN+ ++T + ++ VFEPFG V E+VQ P +
Sbjct: 405 GSGVAAEQLKAAMGMTTAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNP 464
Query: 389 TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQS 432
H KGFGF+Q+A+ AR ++ E+ GR ++V+ DQS
Sbjct: 465 GNH-KGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQS 507
>gi|344304396|gb|EGW34628.1| hypothetical protein SPAPADRAFT_57674 [Spathaspora passalidarum
NRRL Y-27907]
Length = 414
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + F G V R+IM+R++ +S+G GYV+F + S A+
Sbjct: 176 TLFVGRLSWNIDDEWLKREFEHIGGVIGARVIMERSTGKSRGYGYVDFDNKDSAEKALVE 235
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
+ G+ + G+P+ + S + + +SN A G P S + L++GNL FN D
Sbjct: 236 MQGKEIDGRPINLDMSTGKPHASKSNDR---AKQFGDTP-SAPSDTLFIGNLSFNAQRDN 291
Query: 369 LRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
L ++F GTV ++P +T KGFG+VQF+ +++A+ AL LNG+ I GRA ++
Sbjct: 292 LFEIFGQHGTVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEY-IEGRACRL 349
>gi|397610803|gb|EJK61025.1| hypothetical protein THAOC_18547 [Thalassiosira oceanica]
Length = 178
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 96/179 (53%), Gaps = 14/179 (7%)
Query: 258 LKADERDVYEFFSR--AGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLL 315
++ADERDV +F R VRDV+L+ D+ + R +G YVE + V +A+A +G
Sbjct: 1 MRADERDVRHYFRRRVGVSVRDVQLLRDKRTGRHRGCAYVELGSLTDVTLALASTGTVPD 60
Query: 316 GQ--PVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG--------ARRLYVGNLHFNMT 365
Q P++VK SEAEKN ++++ G G T S A+++YVG++ +T
Sbjct: 61 FQRFPILVKHSEAEKNAAPGSTAL-GIGGDMTAASSSSGTGPGGSEAQKVYVGSIDAAVT 119
Query: 366 EDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAI 423
+ QL +F FG ++ V L +D TG +GF F+ + DA A+ G + GR +
Sbjct: 120 QAQLYALFSAFGPLQKVLLQMDPLTGQSRGFAFLSYRDARDANLAIRTMGGQVVAGRQL 178
>gi|301095902|ref|XP_002897050.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108479|gb|EEY66531.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 286
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 102/191 (53%), Gaps = 6/191 (3%)
Query: 237 QVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVE 296
Q++ E+D + + TV+ I KA E D+ FS G VR+VR+ ++S + +G +V
Sbjct: 51 QLKDEID-RKTEATVYVEGIPYKASEGDIVTHFSSCGTVREVRMPRYQDSGKPRGYAHVV 109
Query: 297 FYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLY 356
F D ++ A+ L GQ L + + ++ +EA + + ++ + T G R +Y
Sbjct: 110 FDDEAALEKALELDGQYLFNRYLSIRRAEAPRAV---EMALKEKTQNATKKAVKGCRTVY 166
Query: 357 VGNLHFNMTEDQLRQVFEPFGTVELVQLPL-DETGHCKGFGFVQFARLEDARNALNLNGQ 415
+ L + + ED +RQ GT+ V+LP+ + T KGFG+V+F+ ++A A +G
Sbjct: 167 IKQLPYEVEEDTIRQALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAARRSG- 225
Query: 416 LEIVGRAIKVS 426
++I R + +S
Sbjct: 226 MKIGDRMVLIS 236
>gi|167518462|ref|XP_001743571.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777533|gb|EDQ91149.1| predicted protein [Monosiga brevicollis MX1]
Length = 652
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 80/188 (42%), Gaps = 56/188 (29%)
Query: 440 NTTGDFDDDEGGGLSLNARSRALLMQKLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLG 499
N D DD E GGL LN SR LM +L + A AV P + P P +P
Sbjct: 499 NAQTDTDDTERGGLRLNGTSRVALMHRL------ASRANMAV-PGMPGAKPPKPESPF-- 549
Query: 500 AASAVSTLVPPLVQGTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNET 559
L+L +MFDP ET
Sbjct: 550 -----------------------------------------------LVLHHMFDPAKET 562
Query: 560 YEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGK 619
+D D+ E+V EC+K G + HI V+K S G +YL+F +T+SA A ++GR+F G+
Sbjct: 563 EANWDKDMAEEVLEECTKSGPVFHIVVDKTSQGDIYLKFSDTRSAAHASSVMNGRFFDGR 622
Query: 620 MITATFMV 627
ITA +M
Sbjct: 623 QITAEYMT 630
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P+E ++ + E +P+ +F + DE + F G++ VR+I DR+S RSK
Sbjct: 223 PEETSKKAKTESNPDA-VANLFIGNLSWNVDEEWLTREFEEFGELAGVRIITDRDSGRSK 281
Query: 291 GVGYVEFYDVMSVPMAIALSGQPLL-GQPVMV---KPSEAEKNLVQSNSS-----IAGAS 341
G GYVEF + A+ + LL + + V P + Q S+ A
Sbjct: 282 GFGYVEFTNAEDAAKALEAKNESLLDNRNIRVDFSTPRDKSNAGPQQRSNDRQQKFGDAP 341
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
G T ++ GNL F+ TED +R+ F G V ++LP D +TG KGFG+V+
Sbjct: 342 GEPTA-------TIWCGNLSFDATEDVVREYFAEHGNVNSIRLPTDRDTGAPKGFGYVEM 394
Query: 401 ARLEDARNALN-LNGQLEIVGRAIKV 425
+E+A+ A N L GQ ++ GR +++
Sbjct: 395 GSVEEAQAAFNALQGQ-DVGGRPVRL 419
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 23/210 (10%)
Query: 234 KKEQVEPEVDPERDQRT----------VFAYQICLKADERDVYEFFSRAGKVRDVRLIMD 283
+K + EP P++ ++T +F + DE + + F G++ VR++ D
Sbjct: 277 RKAEEEPAAAPKKSKKTDEEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTD 336
Query: 284 RNSRRSKGVGYVEFY------DVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSI 337
R+S RS+G GYVE+ + + G+ + +P+ N ++ +
Sbjct: 337 RDSGRSRGFGYVEYVNAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQAR- 395
Query: 338 AGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFG 396
A G T P S L+VGN+ F+ ED + ++F GT+ ++LP D E+G KGFG
Sbjct: 396 ARNFGDQTSPES---DTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFG 452
Query: 397 FVQFARLEDARNALN-LNGQLEIVGRAIKV 425
+VQF+ +++AR A N LNG E+ GR +++
Sbjct: 453 YVQFSSVDEARQAFNDLNG-AELNGRPVRL 481
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 23/210 (10%)
Query: 234 KKEQVEPEVDPERDQRT----------VFAYQICLKADERDVYEFFSRAGKVRDVRLIMD 283
+K + EP P++ ++T +F + DE + + F G++ VR++ D
Sbjct: 277 RKAEEEPAAAPKKSKKTDEEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTD 336
Query: 284 RNSRRSKGVGYVEFYDVMSVPMAIA------LSGQPLLGQPVMVKPSEAEKNLVQSNSSI 337
R+S RS+G GYVE+ + A + G+ + +P+ N ++ +
Sbjct: 337 RDSGRSRGFGYVEYVNAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQAR- 395
Query: 338 AGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFG 396
A G T P S L+VGN+ F+ ED + ++F GT+ ++LP D E+G KGFG
Sbjct: 396 ARNFGDQTSPES---DTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFG 452
Query: 397 FVQFARLEDARNALN-LNGQLEIVGRAIKV 425
+VQF+ +++AR A N LNG E+ GR +++
Sbjct: 453 YVQFSSVDEARQAFNDLNG-AELNGRPVRL 481
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 8/187 (4%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D++ + F G V+ R+I +R S RS+G GYV+F D A+
Sbjct: 237 TIFVGRLSWNIDDQWLKNEFEHIGGVQSARVIYERGSTRSRGYGYVDFTDKSYAEKAVKE 296
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
+ G+ L G+P+ S ++ + N A G P S + L++GNL FN DQ
Sbjct: 297 MHGKELDGRPINCDMSTSKPTV---NPREDRAKRFGDMP-SEPSDTLFLGNLSFNADRDQ 352
Query: 369 LRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIKVS 426
+ ++F P G V V++P ET KGFG+VQ+A ++ A+ AL L G+ I R +++
Sbjct: 353 IYELFSPHGEVISVRIPTHPETEQPKGFGYVQYASVDSAQKALETLQGEY-IDNRPVRLD 411
Query: 427 AVTDQSG 433
T ++G
Sbjct: 412 FSTPKTG 418
>gi|307109347|gb|EFN57585.1| hypothetical protein CHLNCDRAFT_143267 [Chlorella variabilis]
Length = 521
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 241 EVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDV 300
+V RT+F + A+E + EFF+ G + +VR+ DR++ R+KG +V+F ++
Sbjct: 251 DVSAANGSRTIFMKNLPWAAEEDTIREFFAECGPIAEVRIAYDRDTGRAKGFAHVQFEEL 310
Query: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNL 360
A ALSG+ L+ + + ++ + + + A + G ++V
Sbjct: 311 EGAAKATALSGESLMDRELYIESTTERQQRTPGENRFATSDG----------TTIFVKGY 360
Query: 361 HFNMTED----QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQ 415
++ ED QL + F G V V+LP D +TG KG GF++F + A+ L+G
Sbjct: 361 DSSLGEDEVRRQLTEAFGEVGAVVSVRLPTDRDTGELKGIGFIEFESTDAKHKAVELDGS 420
Query: 416 LEIVGRAIKV 425
E+ G IKV
Sbjct: 421 -EVAGGWIKV 429
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 237 QVEPEVDPERDQR------TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
+VE E P + Q+ T+F ++ D+ + F G V R+I +R + +S+
Sbjct: 217 KVEEEAAPAKKQKVDEEPATLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSR 276
Query: 291 GVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYS 349
G GYV+F + A+ G+ + G+P+ + S K +N S AS G P S
Sbjct: 277 GYGYVDFDSKSAAEKALKEYQGREIDGRPINLDMSTG-KPHASNNRSNDRASKFGDTP-S 334
Query: 350 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARN 408
+ L++GNL FN D L +VF +G++ V++P +T KGFG+VQ+ +++A+
Sbjct: 335 APSDTLFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQPKGFGYVQYGSVDEAKA 394
Query: 409 ALN-LNGQLEIVGRAIKV 425
AL LNG+ I GR +++
Sbjct: 395 ALEALNGEY-IEGRPVRL 411
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 227 ESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
E P KK +V+ PE +FA + DE + F G++ R++ DR S
Sbjct: 219 EDPEPVAKKAKVD---VPEGASANLFAGNLSWNVDEEWLRSEFEEFGELVGTRIVTDRES 275
Query: 287 RRSKGVGYVEFYDVMSVPMA------IALSGQPL------LGQPVMVKPSEAEKNLVQSN 334
RS+G GYVEF +V A + L G+ L P E N +S
Sbjct: 276 GRSRGFGYVEFANVEDAVKAHAAKKDVELDGRKLNLDFANARANGNANPRERADNRAKS- 334
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCK 393
G T P S L++GN+ F+ E ++++F +G+++ ++LP D E+G K
Sbjct: 335 ------FGDQTSPES---DTLFIGNISFSADESMVQELFSKYGSIQGIRLPTDPESGRPK 385
Query: 394 GFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
GFG+VQF+ +++AR A+ ++ GR+I++
Sbjct: 386 GFGYVQFSSVDEARAAMEAEHGADLGGRSIRL 417
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 216 EKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKV 275
++ER++ D+++E + KK + + + T+F ++ D+ + F+ G V
Sbjct: 123 DQERKASDDEEEEAEVETKKSKTQ-------EPATLFVGRLSWSVDDEWLKNEFAPIGGV 175
Query: 276 RDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSN 334
R+IM+R + RS+G GYV+F D+ A+ + G+ + G+P+ V S ++ SN
Sbjct: 176 VSARVIMERGTDRSRGYGYVDFEDISYAEKALKEMQGKEIDGRPINVDMSTSKPAGGASN 235
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCK 393
A G P S + L++GNL F+ D L ++F FG + V++P ET K
Sbjct: 236 DR---AKKFGDVP-SEPSDTLFLGNLSFDADRDNLYEIFGKFGEIISVRIPTHPETEQPK 291
Query: 394 GFGFVQFARLEDARNALN 411
GFG+VQ+ EDA+ AL+
Sbjct: 292 GFGYVQYTNTEDAKKALD 309
>gi|354544201|emb|CCE40924.1| hypothetical protein CPAR2_109610 [Candida parapsilosis]
Length = 475
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 10/219 (4%)
Query: 212 LKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQR--TVFAYQICLKADERDVYEFF 269
+KE K+R+ + + + P KK + E D+ TVFA ++ D+ + F
Sbjct: 197 VKETPKKRKIEELE-STTTPDYKKAKSESTTTTATDEEPATVFAGRLSWNIDDDWLKREF 255
Query: 270 SRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEK 328
V R+IM+R + +S+G GYV+F + AI + G+ + G+P+ + S
Sbjct: 256 EHLEGVIGARVIMERATGKSRGYGYVDFTSKAAAEKAIEEMQGREIDGRPINLDLSTGRP 315
Query: 329 NLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD- 387
+ + N+ A G P S L++GNL FN D+L ++F +G V +LP
Sbjct: 316 HATKPNNDRAKQFGDQQSPPSD---TLFIGNLSFNANRDKLFEIFGEYGNVISCRLPTHP 372
Query: 388 ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
+T KGFG+VQF +++A+ AL LNG+ + GR ++
Sbjct: 373 DTQQPKGFGYVQFGSVDEAKAALEALNGEY-LEGRPCRL 410
>gi|406867984|gb|EKD21021.1| hypothetical protein MBM_00134 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 544
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 104/223 (46%), Gaps = 10/223 (4%)
Query: 211 ELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFS 270
E +E + R D E P +K + E + + +F + D+ + F
Sbjct: 261 ESEEEAAPSKKRKADDEVAAPAKKTKT---ETAEDTGSKNLFVGNLSWNVDDEWLMREFE 317
Query: 271 RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLL-GQPVMVKPSEAEKN 329
G++ R+I DR S RSKG GYVEF S A+ L+ G+ V S +
Sbjct: 318 EFGEISGARVISDRESGRSKGFGYVEFTSSASAAAALKAKKGSLIDGREANVDFSTPRSD 377
Query: 330 LVQSNSSI--AGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD 387
+ + A A G T P S L++GNL F+ E+ + + F GTV V+LP D
Sbjct: 378 APPKDRAQGRAAAFGDSTNPPS---DTLFLGNLSFDADENTVGEAFGEHGTVVNVRLPTD 434
Query: 388 -ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 429
ETG+ KGFG+V F+ ++DA+ A EI GR +++ T
Sbjct: 435 QETGNPKGFGYVTFSSIDDAKTAFEAMTGAEIAGRPVRLDYAT 477
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 8/186 (4%)
Query: 243 DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMS 302
D + +T+F Q+ DE + F V + R++ D RSKG+GYV+F
Sbjct: 247 DGSEESKTLFVGQLSWNVDEDWLRREFEDVATVENARVVWDNQRNRSKGIGYVDFATRAD 306
Query: 303 VPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLH 361
A+A G + G+P+ + + A +N S A G P S L+VGNL
Sbjct: 307 AEKALAEKQGAEIDGRPINLDFTTARQNNNNSQDR-ARKFGDSESPPS---DTLFVGNLS 362
Query: 362 FNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA-LNLNGQLEIV 419
FN E+ L G V V++P D +TG+ KGF +V F+ +++A+ A +NGQ ++
Sbjct: 363 FNADEEALGAAMSEHGEVTSVRIPTDKDTGNKKGFAYVTFSTIDEAKKAHAAMNGQ-QVC 421
Query: 420 GRAIKV 425
GR+I+
Sbjct: 422 GRSIRT 427
>gi|126314629|ref|XP_001373122.1| PREDICTED: nucleolin-like [Monodelphis domestica]
Length = 705
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
+RD RT+F + K + ++ E F A ++RL+ ++ KG+ YVEF V
Sbjct: 373 DRDARTLFVKNLPYKVTQEELKEVFEDA---IEIRLVCTKDGT-PKGIAYVEFKTEADVD 428
Query: 305 MAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
A+ G + G+ +++ + EK+ Q NS S G ++ L + NL ++
Sbjct: 429 KALEEKQGTEIDGRALILDYT-GEKSQGQENSRGKNNSWSGNNSKPSDSKTLVLNNLAYS 487
Query: 364 MTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAI 423
TE+ L++VFE + LP + G KG+ F++FA +EDA+ ALN +EI GRAI
Sbjct: 488 ATEESLQEVFE---KATSISLPQNNQGRPKGYAFIEFASVEDAKEALNSCNNIEIEGRAI 544
Query: 424 KV 425
++
Sbjct: 545 RL 546
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 23/156 (14%)
Query: 247 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMA 306
D +T+ + A E + E F +A + + N R KG ++EF V A
Sbjct: 475 DSKTLVLNNLAYSATEESLQEVFEKATSIS----LPQNNQGRPKGYAFIEFASVEDAKEA 530
Query: 307 I-ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMT 365
+ + + + G+ + ++ + G P + + L+V L + T
Sbjct: 531 LNSCNNIEIEGRAIRLE--------------LKGQKTANAAPRNQSNKTLFVKGLSEDTT 576
Query: 366 EDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
E+ L+ F G+V ++ D ETG KGFGFV F
Sbjct: 577 EETLKDSFH--GSVG-ARIATDRETGSSKGFGFVDF 609
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 227 ESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
E P KK +V+ PE +F + DE + F G++ R++ DR S
Sbjct: 219 EEAEPVAKKAKVD---VPEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRES 275
Query: 287 RRSKGVGYVEFYDVM-SVPMAIALSGQPLLGQPVMV-----------KPSEAEKNLVQSN 334
RS+G GYVEF +V +V A L G+ + + P E N +S
Sbjct: 276 GRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNANPRERADNRAKS- 334
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCK 393
G T P S L++GN+ F+ E+ ++++F +GT++ ++LP D ++G K
Sbjct: 335 ------FGDQTSPES---DTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPK 385
Query: 394 GFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
GFG+VQF+ +++AR AL ++ GR+I++
Sbjct: 386 GFGYVQFSSVDEARAALEAENGADLGGRSIRL 417
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 30/215 (13%)
Query: 234 KKEQVEPEVDPERDQRT----------VFAYQICLKADERDVYEFFSRAGKVRDVRLIMD 283
+K + EP P++ ++T +F + DE + + F G++ VR++ D
Sbjct: 261 RKAEEEPAAAPKKSKKTDEEASGASANLFVGNLSWNVDEEWLRQEFETFGELSGVRIVTD 320
Query: 284 RNSRRSKGVGYVEFYDVMSVPMAIA------LSGQPL-----LGQPVMVKPSEAEKNLVQ 332
R+S RS+G GYVE+ A + G+ + G+P + ++ Q
Sbjct: 321 RDSGRSRGFGYVEYVSAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNNNNQDRAQ 380
Query: 333 SNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGH 391
+ + G S + L+VGN+ F+ ED + ++F GT+ ++LP D E+G
Sbjct: 381 ARARNFGDQA------SPESDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGR 434
Query: 392 CKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
KGFG+VQF+ +++AR A N LNG E+ GR +++
Sbjct: 435 PKGFGYVQFSSVDEARQAFNDLNG-AELNGRPVRL 468
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 11/200 (5%)
Query: 213 KEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRA 272
K + +R++ D++ P KK +V +VD + +F + DE + F
Sbjct: 227 KPKSAKRKAEDDE----TPAAKKSKVA-DVDTSKGPN-LFVGNLSWNVDENWLRSEFEEF 280
Query: 273 GKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS-GQPLLGQPVMVKPSEAEKNLV 331
G++ VRL+ DR + RSKG GYVEF D A A G L G+P+ V + A N
Sbjct: 281 GELSGVRLMTDRQTGRSKGFGYVEFVDAADAAKAYAAKQGAELDGRPLNVDFANARSNDN 340
Query: 332 QSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETG 390
+ + + G G + L++GNL F+ T++ + + F P GTV ++LP D ETG
Sbjct: 341 KPADNRRKSYGDQLGEPT---DTLFLGNLSFDCTQEDVSEAFAPHGTVMGIRLPTDRETG 397
Query: 391 HCKGFGFVQFARLEDARNAL 410
KGFG+V F +++A+ AL
Sbjct: 398 APKGFGYVTFGSVDEAKAAL 417
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
L+VGNL +N+ E+ LR FE FG + V+L D +TG KGFG+V+F DA A
Sbjct: 259 LFVGNLSWNVDENWLRSEFEEFGELSGVRLMTDRQTGRSKGFGYVEFVDAADAAKAYAAK 318
Query: 414 GQLEIVGRAIKV 425
E+ GR + V
Sbjct: 319 QGAELDGRPLNV 330
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 290
P KK +VE E E + +F + DE + F G++ R+I DR + R+K
Sbjct: 200 PIVKKSKVE-EPAAEEGIKNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAK 258
Query: 291 GVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYS 349
G GYVEF + A + L G+ + V S + + A G P S
Sbjct: 259 GFGYVEFSNAADAAKAQKEMHEYELDGRQLNVDFSTPRAKPDANGGARANKYGDKRSPPS 318
Query: 350 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARN 408
L++GN+ F + + +++VF +G++ V LP D +TG KGFG+V F+ ++A
Sbjct: 319 ---NTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATA 375
Query: 409 ALN-LNGQLEIVGRAIKVSAVT 429
AL LNGQ +I GRAI++ T
Sbjct: 376 ALEALNGQ-DIGGRAIRIDYAT 396
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 26/222 (11%)
Query: 213 KEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADE----RDVYEF 268
K+R+ E E+ K+S+ + Q P +F + DE R+ EF
Sbjct: 240 KKRKAEAEATQTTKKSKTEQNGDAQGSP---------NLFVGNLSWNVDEEWLGREFEEF 290
Query: 269 FSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMV---KPS 324
+A VR++ DR + RSKG GYVEF V + A+ A G L +P+ + P
Sbjct: 291 GPKA-----VRIVTDRATGRSKGFGYVEFETVEAATAALNAKKGTDLDNRPLNLDFSTPR 345
Query: 325 EAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQL 384
+N SS A S G P S + L+VGNL F+ T D + ++F+ +GT+ V L
Sbjct: 346 PEGQNPRDRASSRA--SQHGDVP-SRPSDTLFVGNLSFDATPDSVTEIFQEYGTITRVSL 402
Query: 385 PLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
P E G KGFG+V F+ +E+A+ A E+ GR++++
Sbjct: 403 PTKPEDGMPKGFGYVGFSSVEEAQGAFEALQGAELNGRSMRL 444
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 227 ESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
E P KK +V+ PE +F + DE + F G++ R++ DR S
Sbjct: 219 EEAEPVAKKAKVD---VPEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRES 275
Query: 287 RRSKGVGYVEFYDVM-SVPMAIALSGQPLLGQPVMV-----------KPSEAEKNLVQSN 334
RS+G GYVEF +V +V A L G+ + + P E N +S
Sbjct: 276 GRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNANPRERADNRAKS- 334
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCK 393
G T P S L++GN+ F+ E+ ++++F +GT++ ++LP D ++G K
Sbjct: 335 ------FGDQTSPES---DTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPK 385
Query: 394 GFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
GFG+VQF+ +++AR AL ++ GR+I++
Sbjct: 386 GFGYVQFSSVDEARAALEAEHGADLGGRSIRL 417
>gi|390340600|ref|XP_003725279.1| PREDICTED: uncharacterized protein LOC100893111 [Strongylocentrotus
purpuratus]
Length = 1497
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 97/175 (55%), Gaps = 20/175 (11%)
Query: 64 KSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDR--------DRE 115
K RD+ R R K+RD HR + RD+ R + +D+D ER +DR DRE
Sbjct: 1128 KPRDKDRERHRDKDRDKDSHRDKEHERKRDKDRDRQKEKDKDRERRKDREGESSKEKDRE 1187
Query: 116 ERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSR 175
R +DR +D +D+DRRE+D D ++REK+ KE+++ E+ RS E+E+ R
Sbjct: 1188 RR--KDREKDSSKDKDRREKDRDGRKEREKESSKEKDRG-------EKDRSKHREKEKDR 1238
Query: 176 DREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRR 230
DRE ER ++E ER S +E R R RD + +EREKE SRD DK S +
Sbjct: 1239 DREKKERSHRDNKESAERTDSGKKE---RHRDRDEKKREREKESGSRDGDKSSTK 1290
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 121/194 (62%), Gaps = 14/194 (7%)
Query: 51 EDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDG--GRDRPRSSWEHRDRDTER 108
+D D D HR + R ++ DR+KE+D R R+G +++ R + R++D+ +
Sbjct: 1140 KDRDKDSHRDK-EHERKRDKDRDRQKEKDKDRERRKDREGESSKEKDRERRKDREKDSSK 1198
Query: 109 DRDRDREERNGR-DRNRDRGRDRDRRERDHDTDRDREKDKEKE-REKSHRSGSQSERYRS 166
D+DR ++R+GR +R ++ +++DR E+D R++EKD+++E +E+SHR +S R+
Sbjct: 1199 DKDRREKDRDGRKEREKESSKEKDRGEKDRSKHREKEKDRDREKKERSHRDNKESAE-RT 1257
Query: 167 DRDERERSRDREVIERERSRDREVIERERS------RDREVIERERSRDRELKEREKERE 220
D ++ER RDR+ +RER ++ + ++S RD+ E +R RD++ +ER KE+E
Sbjct: 1258 DSGKKERHRDRDEKKREREKESGSRDGDKSSTKDGDRDKRR-EEKRHRDKD-RERRKEKE 1315
Query: 221 SRDNDKESRRPKEK 234
S D+D+E R+ ++K
Sbjct: 1316 SNDSDRERRKHRDK 1329
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 35/171 (20%)
Query: 85 SWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDR------------ 132
+W G ++ S E R R +D+DR++ + R++DR R RD+
Sbjct: 1096 TW---GAKELTESIKEARSSGKSRHKDKDRDKEREKPRDKDRERHRDKDRDKDSHRDKEH 1152
Query: 133 -RERDHDTDRDREKDKEKEREKSHRSGSQSERYR-----------SDRDERERSRD-REV 179
R+RD D DR +EKDK++ER K S E+ R D+D RE+ RD R+
Sbjct: 1153 ERKRDKDRDRQKEKDKDRERRKDREGESSKEKDRERRKDREKDSSKDKDRREKDRDGRKE 1212
Query: 180 IERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRR 230
E+E S++++ E++RS+ R E+E+ RDRE +KER RDN + + R
Sbjct: 1213 REKESSKEKDRGEKDRSKHR---EKEKDRDRE----KKERSHRDNKESAER 1256
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 21/182 (11%)
Query: 62 GSKSRDESRNHDRRKERDSSC---HRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERN 118
SK +D R DR E+DSS R RDG ++R + S + +DR E+DR + RE+
Sbjct: 1180 SSKEKDRERRKDR--EKDSSKDKDRREKDRDGRKEREKESSKEKDRG-EKDRSKHREKEK 1236
Query: 119 GRDRNRDRGRDRDRRERDHDTD-------RDR-EKDKEKEREKSHRSGSQSERYRSDRDE 170
RDR + RD +E TD RDR EK +E+E+E R G +S DRD+
Sbjct: 1237 DRDREKKERSHRDNKESAERTDSGKKERHRDRDEKKREREKESGSRDGDKSSTKDGDRDK 1296
Query: 171 R---ERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKE 227
R +R RD+ +RER +++E + +R R R+ +++ S DR +E+ ER+ R KE
Sbjct: 1297 RREEKRHRDK---DRERRKEKESNDSDRER-RKHRDKDGSADRRKREKSGERKHRKEHKE 1352
Query: 228 SR 229
+
Sbjct: 1353 EK 1354
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 32 KSEDRVRSRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCH---RSWSR 88
K +DR R + + D K D + + RDE + R +E++S +S ++
Sbjct: 1234 KEKDRDREKKERSHRDNKESAERTDSGKKERHRDRDEKK---REREKESGSRDGDKSSTK 1290
Query: 89 DGGRDRPRSSWEHRDRDTERDR-----DRDREERNGRDRNRDRGRDRDRRERDHDTDRDR 143
DG RD+ R HRD+D ER + D DRE R RD +D DR +RE+ + +
Sbjct: 1291 DGDRDKRREEKRHRDKDRERRKEKESNDSDRERRKHRD--KDGSADRRKREKSGERKHRK 1348
Query: 144 EKDKEKEREKSHRSGSQSERYRSDRDE 170
E +EK R KS Q ER+ R++
Sbjct: 1349 EHKEEKGRSKSEHKNGQDERHEKKRED 1375
>gi|346979496|gb|EGY22948.1| gar2 [Verticillium dahliae VdLs.17]
Length = 485
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-A 308
T+F + ++ +Y+ FS + R+I DR RS+G GYV+F D S A+ A
Sbjct: 227 TLFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAKAALEA 286
Query: 309 LSGQPLLGQPVMV----KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+G L G+ + + K E N + A G P S L+VGN+ F M
Sbjct: 287 KNGTELEGRNMNIDFSGKRPERSDNPGDRANDRAQRHGDSLSPES---DTLFVGNISFEM 343
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQL---EIV 419
+D + F V+LP D E+G+ KGFG+V F+ ++DA+ AL+ LNGQ
Sbjct: 344 DQDTVHAFFATVAEPTSVRLPTDPESGNLKGFGYVSFSSIDDAKKALSELNGQYLGEGSS 403
Query: 420 GRAIKV 425
GRA+++
Sbjct: 404 GRAVRL 409
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
L+VG+L + + +D L Q F F + ++ D E G +GFG+V F+ E A+ AL
Sbjct: 228 LFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAKAALEAK 287
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEG--GGLSLNARSRALLMQKLDRSG 471
E+ GR + + D SG + ++ GD +D G SL+ S L + +
Sbjct: 288 NGTELEGRNMNI----DFSGKRPERSDNPGDRANDRAQRHGDSLSPESDTLFVGNISFEM 343
Query: 472 SATTIAGSAVTPAVNSTALPLPTAPLLG 499
T+ T A T++ LPT P G
Sbjct: 344 DQDTVHAFFATVA-EPTSVRLPTDPESG 370
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T++ + D++ +YE F + R++ D++SRRS+G GYV+F + A
Sbjct: 306 TLWVGNLGWAVDDKALYEEFENCEGIVSARVVTDKDSRRSRGFGYVDFTSPDAAEKAYNE 365
Query: 309 LSGQPLLGQPVMV----KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+G L G+ + + KP+E ++ + A G P S L+VGNL FN
Sbjct: 366 KNGAHLQGREMRLDFASKPAEGNDPTTRA-AERARKHGDVISPES---DTLFVGNLSFNA 421
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRA 422
TE+ + + F V+ +++P D E+G KGF +V F +EDA+ A N LNG + GR
Sbjct: 422 TEESVSEFFNSVAAVQSLRIPTDQESGRPKGFAYVTFNSVEDAKTAFNQLNGS-NLDGRP 480
Query: 423 IKV 425
+++
Sbjct: 481 VRL 483
>gi|320583460|gb|EFW97673.1| nuclear localization sequence binding protein [Ogataea
parapolymorpha DL-1]
Length = 500
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 9/211 (4%)
Query: 229 RRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRR 288
R+ K ++EQ P P ++ T+F ++ D++ + E F V R++ +R + R
Sbjct: 241 RKRKAEEEQETPSKKP-KEVATLFVGRLAWAVDDQRLLEEFQSLDGVLSARVMTERETGR 299
Query: 289 SKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG-ASGGGTG 346
S+G GYV+F A+ G+ + G+P+ + S ++ N A G
Sbjct: 300 SRGYGYVDFESKEQAQKALEQFQGREIEGRPINLDMSTSKPQTPSQNQKFQDRAKKYGDT 359
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
P S + L+VGNL F D L++ FE GTV +++P E+ KGFG+VQF +++
Sbjct: 360 P-SQPSDTLFVGNLSFQADRDTLKEFFEQHGTVLGIRIPTHPESEQPKGFGYVQFGSVDE 418
Query: 406 ARNALN-LNGQLEIVGRAIKV--SAVTDQSG 433
A+ AL LNG+ I GR +++ SA D +G
Sbjct: 419 AKAALEALNGEY-IAGRPVRLDFSAPRDPNG 448
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 158 GSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREK 217
G S R ++R E RSR ++ E S+++ E+ + RE+ R + D K
Sbjct: 285 GVLSARVMTER-ETGRSRGYGYVDFE-SKEQAQKALEQFQGREIEGRPINLDMST---SK 339
Query: 218 ERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRD 277
+ N K R K+ + P + T+F + +AD + EFF + G V
Sbjct: 340 PQTPSQNQKFQDRAKKYGD------TPSQPSDTLFVGNLSFQADRDTLKEFFEQHGTVLG 393
Query: 278 VRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPV 319
+R+ S + KG GYV+F V A+ AL+G+ + G+PV
Sbjct: 394 IRIPTHPESEQPKGFGYVQFGSVDEAKAALEALNGEYIAGRPV 436
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 9/180 (5%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+ +F + DE + F G++ R+I DR S RSKG GYVEF A A
Sbjct: 198 KNLFVGSLSWNIDEDWLRREFEGFGEITGCRVITDRESGRSKGFGYVEFASAADAAKAKA 257
Query: 309 -LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTED 367
+ L G+ + V S + QS A A+ G S A L++GNL F+ + +
Sbjct: 258 EMHEYELDGRGLNVDFSTPREKPDQS----ARANKYGD-KRSAPANTLFLGNLSFDCSNE 312
Query: 368 QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
++++F+ +G + V LP D +TG KGFG+V F +E+A AL LNGQ E+ GRAI++
Sbjct: 313 GIQEIFQEYGNITRVSLPTDRDTGSLKGFGYVDFGTVEEATAALEALNGQ-EVEGRAIRI 371
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 18/187 (9%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + + F G V R+I +R + RS+G GYV+F D AI
Sbjct: 172 TIFVGRLSWSIDDEWLKKEFEHIGGVVGARVIYERGTDRSRGYGYVDFEDKSYAEKAIQE 231
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG----ASGGGTGPYSGGARRLYVGNLHFNM 364
+ G+ + G+P+ N+ S S AG A G P S + L++GNL FN
Sbjct: 232 MQGKEIDGRPI---------NVDMSTSKPAGGNDRAKKFGDVP-SEPSDTLFLGNLSFNA 281
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRA 422
+D + + F +G + V++P ET KGFG+VQF+ +EDA+ AL L G+ I RA
Sbjct: 282 DKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKALEGLQGEY-IDNRA 340
Query: 423 IKVSAVT 429
+++ T
Sbjct: 341 VRLDYST 347
>gi|149244172|ref|XP_001526629.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449023|gb|EDK43279.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 510
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 103/197 (52%), Gaps = 8/197 (4%)
Query: 225 DKESRRPKEKKEQVEPEVDP---ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
D+ S++ K + E+ P E + T+F ++ D+ + + F G V R+I
Sbjct: 233 DETSKKSKTEAEETAAPTSPAVAEEEGATLFVGRLSWNIDDDWLKKEFEHLGDVIGARVI 292
Query: 282 MDRNSRRSKGVGYVEF-YDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGA 340
M+R + +S+G GYV+F + + G+ + G+P+ + S + + ++N+
Sbjct: 293 MERATGKSRGYGYVDFKTKAAAEKALAEMQGKEIDGRPINLDMSTGKPHASKANAGDRAR 352
Query: 341 SGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQ 399
G + S + L++GNL FN D L ++F +GTV ++P +T KGFG+VQ
Sbjct: 353 QFGDS--QSPPSDTLFIGNLSFNANRDSLFEIFGEYGTVISCRVPTHPDTQQPKGFGYVQ 410
Query: 400 FARLEDARNALN-LNGQ 415
F+ +++A+ AL LNG+
Sbjct: 411 FSSVDEAKAALEALNGE 427
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 113/219 (51%), Gaps = 22/219 (10%)
Query: 215 REKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGK 274
+ ++R++ D ++E PK+ K VD + +F + DE + F G+
Sbjct: 232 KSQKRKAEDEEEEVSAPKKTK------VD-SNEGGNLFIGNLSWNVDEEWLRSEFEEFGE 284
Query: 275 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA------LSGQPLLGQPVMVKPSEAEK 328
+ VR++ DR+S RS+G GYVEF + A A L G+ L + + A K
Sbjct: 285 LAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGRSNAAPK 344
Query: 329 NLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD- 387
QS A G T P S L++GN+ F+ E+ + + F G++ V+LP D
Sbjct: 345 ERAQSR---AQNFGDQTSPES---DTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDP 398
Query: 388 ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
E+G KGFG+VQF+ +++AR+A LNG ++ GR++++
Sbjct: 399 ESGRPKGFGYVQFSSVDEARSAFQALNG-ADLGGRSMRL 436
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 16/139 (11%)
Query: 195 RSRDREVIE----------RERSRDRELKEREKE---RESRDNDKESRRPKEKKEQVEPE 241
RSR +E +D EL R+ R N R + + + +
Sbjct: 298 RSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQ 357
Query: 242 VDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVM 301
PE D T+F I A+E + E F+ G + VRL D S R KG GYV+F V
Sbjct: 358 TSPESD--TLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVD 415
Query: 302 SVPMAI-ALSGQPLLGQPV 319
A AL+G L G+ +
Sbjct: 416 EARSAFQALNGADLGGRSM 434
>gi|302414816|ref|XP_003005240.1| gar2 [Verticillium albo-atrum VaMs.102]
gi|261356309|gb|EEY18737.1| gar2 [Verticillium albo-atrum VaMs.102]
Length = 437
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-A 308
T+F + ++ +Y+ FS + R+I DR RS+G GYV+F D S A+ A
Sbjct: 178 TLFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAKAALEA 237
Query: 309 LSGQPLLGQPVMV----KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+G L G+ + + K E N + A G P S L+VGN+ F M
Sbjct: 238 KNGTELEGRNMNIDFSGKRPERSDNPGDRANDRAQRHGDSLSPES---DTLFVGNISFEM 294
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQL---EIV 419
+D + F V+LP D E+G+ KGFG+V F+ ++DA+ AL+ LNGQ
Sbjct: 295 DQDTVHAFFATVAEPTSVRLPTDPESGNLKGFGYVSFSSIDDAKKALSELNGQYLGEGSS 354
Query: 420 GRAIKV 425
GRA+++
Sbjct: 355 GRAVRL 360
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
L+VG+L + + +D L Q F F + ++ D E G +GFG+V F+ E A+ AL
Sbjct: 179 LFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAKAALEAK 238
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEG--GGLSLNARSRALLMQKLDRSG 471
E+ GR + + D SG + ++ GD +D G SL+ S L + +
Sbjct: 239 NGTELEGRNMNI----DFSGKRPERSDNPGDRANDRAQRHGDSLSPESDTLFVGNISFEM 294
Query: 472 SATTIAGSAVTPAVNSTALPLPTAP 496
T+ T A T++ LPT P
Sbjct: 295 DQDTVHAFFATVA-EPTSVRLPTDP 318
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 242 VDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVM 301
+ PE D T+F I + D+ V+ FF+ + VRL D S KG GYV F +
Sbjct: 278 LSPESD--TLFVGNISFEMDQDTVHAFFATVAEPTSVRLPTDPESGNLKGFGYVSFSSID 335
Query: 302 SVPMAIA-LSGQPL 314
A++ L+GQ L
Sbjct: 336 DAKKALSELNGQYL 349
>gi|148226518|ref|NP_001081557.1| nucleolin [Xenopus laevis]
gi|295899|emb|CAA51460.1| nucleolin [Xenopus laevis]
Length = 705
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 22/183 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RT+F I ++ E F A +D+R I N +KG+ YVEF
Sbjct: 372 ERDSRTLFVKNIPYSTSAEELQEIFENA---KDIR-IPTGNDGSNKGIAYVEFSTEAEAN 427
Query: 305 MAIA-LSGQPLLGQPVMVK-PSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHF 362
A+ G + G+ + V E +N SGG GP +G ++ L V NL +
Sbjct: 428 KALEEKQGAEIEGRSLFVDFTGEKSQN-----------SGGRRGP-AGDSKVLVVNNLSY 475
Query: 363 NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
+ TED LR+VFE ++ + Q G KGF FV+F+ +EDA+ A++ E+ GR+
Sbjct: 476 SATEDSLREVFEKATSIRIPQ----NQGRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRS 531
Query: 423 IKV 425
I++
Sbjct: 532 IRL 534
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 244 PERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
P D + + + A E + E F +A +R + +N R+KG +VEF +
Sbjct: 461 PAGDSKVLVVNNLSYSATEDSLREVFEKATSIR-----IPQNQGRAKGFAFVEFSSMEDA 515
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
A+ +E E ++ S G GG S ++ L+V L +
Sbjct: 516 KEAMDSCNN-----------TEVEGRSIRLEFSQGGGPQGGGRGGSVQSKTLFVRGLSED 564
Query: 364 MTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNA 409
TE+ L++ F+ G++ + +TG KGFGFV F+ EDA+ A
Sbjct: 565 TTEETLKEAFD--GSINARIVTDRDTGASKGFGFVDFSSAEDAKAA 608
>gi|213625217|gb|AAI70091.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 22/183 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RT+F I ++ E F A +D+R I N +KG+ YVEF
Sbjct: 371 ERDSRTLFVKNIPYSTSAEELQEIFENA---KDIR-IPTGNDGSNKGIAYVEFSTEAEAN 426
Query: 305 MAIA-LSGQPLLGQPVMVK-PSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHF 362
A+ G + G+ + V E +N SGG GP +G ++ L V NL +
Sbjct: 427 KALEEKQGAEIEGRSLFVDFTGEKSQN-----------SGGRRGP-AGDSKVLVVNNLSY 474
Query: 363 NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
+ TED LR+VFE ++ + Q G KGF FV+F+ +EDA+ A++ E+ GR+
Sbjct: 475 SATEDSLREVFEKATSIRIPQ----NQGRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRS 530
Query: 423 IKV 425
I++
Sbjct: 531 IRL 533
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 244 PERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
P D + + + A E + E F +A +R + +N R+KG +VEF +
Sbjct: 460 PAGDSKVLVVNNLSYSATEDSLREVFEKATSIR-----IPQNQGRAKGFAFVEFSSMEDA 514
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
A+ +E E ++ S G GG S ++ L+V L +
Sbjct: 515 KEAMDSCNN-----------TEVEGRSIRLEFSQGGGPQGGGRGGSVQSKTLFVRGLSED 563
Query: 364 MTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNA 409
TE+ L++ F+ G++ + +TG KGFGFV F+ EDA+ A
Sbjct: 564 TTEETLKEAFD--GSINARIVTDRDTGASKGFGFVDFSSAEDAKAA 607
>gi|213623691|gb|AAI70089.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 22/183 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RT+F I ++ E F A +D+R I N +KG+ YVEF
Sbjct: 371 ERDSRTLFVKNIPYSTSAEELQEIFENA---KDIR-IPTGNDGSNKGIAYVEFSTEAEAN 426
Query: 305 MAIA-LSGQPLLGQPVMVK-PSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHF 362
A+ G + G+ + V E +N SGG GP +G ++ L V NL +
Sbjct: 427 KALEEKQGAEIEGRSLFVDFTGEKSQN-----------SGGRRGP-AGDSKVLVVNNLSY 474
Query: 363 NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
+ TED LR+VFE ++ + Q G KGF FV+F+ +EDA+ A++ E+ GR+
Sbjct: 475 SATEDSLREVFEKATSIRIPQ----NQGRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRS 530
Query: 423 IKV 425
I++
Sbjct: 531 IRL 533
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 244 PERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
P D + + + A E + E F +A +R + +N R+KG +VEF +
Sbjct: 460 PAGDSKVLVVNNLSYSATEDSLREVFEKATSIR-----IPQNQGRAKGFAFVEFSSMEDA 514
Query: 304 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
A+ +E E ++ S G GG S ++ L+V L +
Sbjct: 515 KEAMDSCNN-----------TEVEGRSIRLEFSQGGGPQGGGRGGSVQSKTLFVRGLSED 563
Query: 364 MTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNA 409
TE+ L++ F+ G++ + +TG KGFGFV F+ EDA+ A
Sbjct: 564 TTEETLKEAFD--GSINARIVTDRDTGASKGFGFVDFSSSEDAKAA 607
>gi|408399266|gb|EKJ78389.1| hypothetical protein FPSE_01494 [Fusarium pseudograminearum CS3096]
Length = 498
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-A 308
T+FA + D+ +YE F + + R++ ++ + RS+G GYV+F D S A
Sbjct: 236 TLFAGSLSWSIDDNALYEAFKHIEGLANARVMTEKGTGRSRGFGYVDFNDAASCTKAYET 295
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
++G L G+ + + + A + A + S + L+VGNL F++ +D
Sbjct: 296 MNGTELEGRAINLDYANARPAEANPAARAADRAQRHGDTVSPESDTLFVGNLPFDVDQDS 355
Query: 369 LRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
+R FE V V+LP D ++G+ KGFG+V F+ +E+A+
Sbjct: 356 VRAFFEEVAAVASVRLPTDPDSGNLKGFGYVSFSSVEEAKQVF 398
>gi|367006051|ref|XP_003687757.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
gi|357526062|emb|CCE65323.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
Length = 416
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 27/188 (14%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
K K E+ EP T+F ++ D+ + F G V R++++R + RS+G
Sbjct: 148 KAKTEEGEPA--------TIFVGRLSWSIDDEWLKNEFDHIGGVIGARVMLERGTDRSRG 199
Query: 292 VGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGG------- 343
GYV+F D AI + G+ + G+ + N S S AG++ G
Sbjct: 200 YGYVDFSDKSYAEKAIKEMHGKEIDGREI---------NCDMSTSKPAGSNNGADRAKKF 250
Query: 344 GTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFAR 402
G P S + L++GNL FN D + ++F FG + V+LP ET KGFG+VQ+
Sbjct: 251 GDIP-SEPSETLFLGNLSFNADRDSIWEMFSKFGEIVSVRLPTHPETEQPKGFGYVQYGN 309
Query: 403 LEDARNAL 410
++DA+ AL
Sbjct: 310 IDDAKKAL 317
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 22/219 (10%)
Query: 215 REKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGK 274
+ ++R++ D ++E PK+ K VD + +F + DE + F G+
Sbjct: 202 KSQKRKAEDEEEEVTAPKKTK------VD-SNEGGNLFIGNLSWNVDEEWLRSEFEEFGE 254
Query: 275 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA------LSGQPLLGQPVMVKPSEAEK 328
+ VR++ DR+S RS+G GYVEF + A A L G+ L + + A K
Sbjct: 255 LAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGRSNAAPK 314
Query: 329 NLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD- 387
QS + G T P S L++GN+ F+ E+ + + F G++ V+LP D
Sbjct: 315 ERAQSRAQNFGDQ---TSPES---DTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDP 368
Query: 388 ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
E+G KGFG+VQF+ +++AR+A LNG ++ GR++++
Sbjct: 369 ESGRPKGFGYVQFSSVDEARSAFQALNG-ADLGGRSMRL 406
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 222 RDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
R N R + + + + PE D T+F I A+E + E F+ G + VRL
Sbjct: 308 RSNAAPKERAQSRAQNFGDQTSPESD--TLFIGNIAFSANENMISEAFAEHGSILGVRLP 365
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKN 329
D S R KG GYV+F V A AL+G L G+ + + S +N
Sbjct: 366 TDPESGRPKGFGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQN 414
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+ VF + + E F G++ R++ DR + +S+G GYV+F D A+
Sbjct: 288 KNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE 347
Query: 309 LSGQPLLGQPVMV----------KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
++G L G+ + V P K Q N ++ S + ++VG
Sbjct: 348 MAGTELDGRTINVDLSAPRPPRDGPGATPKK--QFNDELSAPS-----------QTVFVG 394
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNL---NG 414
NL F T+D + + F FG V V++P D ETG KGF +V+F ++ A+ A++ +
Sbjct: 395 NLSFESTQDAVWESFSDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAKKAVDQGRSSE 454
Query: 415 QLEIVGRAIKV 425
LEI GR +++
Sbjct: 455 GLEIDGRRVRL 465
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI- 307
+T+ + D+ + F G++ VR+ +DR S RS+G G+++F +V A+
Sbjct: 288 KTIIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALE 347
Query: 308 ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTED 367
+ G+ + G+ + V +E+ Q+ ++ G + S ++ ++VGN+ F+ ED
Sbjct: 348 TMQGKEVDGRAIAVDKTESNPRNTQARAAKFGDT------PSEPSQTIFVGNVAFSADED 401
Query: 368 QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQ-LEIVGRAIKV 425
L Q F +G V V+LP D ETG KGF +V+F A A + LEI GR +++
Sbjct: 402 ALWQTFADYGAVRSVRLPTDRETGQPKGFAYVEFEDQAGATAAFEAGKEGLEIGGRPVRL 461
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 244 PERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
P +T+F + ADE +++ F+ G VR VRL DR + + KG YVEF D
Sbjct: 382 PSEPSQTIFVGNVAFSADEDALWQTFADYGAVRSVRLPTDRETGQPKGFAYVEFED 437
>gi|380483681|emb|CCF40465.1| cutinase negative acting protein [Colletotrichum higginsianum]
Length = 401
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 219 RESRDNDKESRRPKEKKEQVEPEVDPERDQRT--------VFAYQICLKADERDVYEFFS 270
+E+ + + + P +K++ ++ V P + RT +F + D+ +YE F
Sbjct: 170 KEASETEAKVEEPSKKRKALDEPVIPGKKARTDISDKSSTLFVGSLAWAVDDNSLYEAFQ 229
Query: 271 RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS-GQPLLGQPVMV-----KPS 324
+ R++ D+ + RS+G GYV+F + A+ S G+ L G+ + + KP+
Sbjct: 230 EFSDLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEGSQGRELAGRAMNIDFSGQKPA 289
Query: 325 EAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQL 384
E N A G P S L+VGNL F++ +D +R F V V+L
Sbjct: 290 -GEGNPQARAFDRAQKHGDTVSPES---DTLFVGNLPFDVDQDTVRAFFSEAAEVTSVRL 345
Query: 385 PLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQ 415
P D E+G+ KGFG+V F ++DA+ A LNGQ
Sbjct: 346 PTDPESGNLKGFGYVSFNSIDDAKTAFAQLNGQ 378
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLN 413
L+VG+L + + ++ L + F+ F + ++ D+ TG +GFG+V FA E A AL +
Sbjct: 210 LFVGSLAWAVDDNSLYEAFQEFSDLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEGS 269
Query: 414 GQLEIVGRAIKV 425
E+ GRA+ +
Sbjct: 270 QGRELAGRAMNI 281
>gi|259146662|emb|CAY79919.1| Nsr1p [Saccharomyces cerevisiae EC1118]
Length = 414
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + + F G V R+I +R + RS+G GYV+F + AI
Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 228
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG----ASGGGTGPYSGGARRLYVGNLHFNM 364
+ G+ + G+P+ N S S AG A G P S + L++GNL FN
Sbjct: 229 MQGKEIDGRPI---------NCDMSTSKPAGNNDRAKKFGDTP-SEPSDTLFLGNLSFNA 278
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQL 416
D + ++F G V V++P ET KGFG+VQF+ +EDA+ AL+ L G+
Sbjct: 279 DRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEY 332
>gi|190406825|gb|EDV10092.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae RM11-1a]
gi|207345058|gb|EDZ72003.1| YGR159Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272028|gb|EEU07041.1| Nsr1p [Saccharomyces cerevisiae JAY291]
gi|323354844|gb|EGA86677.1| Nsr1p [Saccharomyces cerevisiae VL3]
gi|365765431|gb|EHN06939.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + + F G V R+I +R + RS+G GYV+F + AI
Sbjct: 171 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 230
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG----ASGGGTGPYSGGARRLYVGNLHFNM 364
+ G+ + G+P+ N S S AG A G P S + L++GNL FN
Sbjct: 231 MQGKEIDGRPI---------NCDMSTSKPAGNNDRAKKFGDTP-SEPSDTLFLGNLSFNA 280
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQL 416
D + ++F G V V++P ET KGFG+VQF+ +EDA+ AL+ L G+
Sbjct: 281 DRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEY 334
>gi|151943436|gb|EDN61747.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae YJM789]
Length = 418
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + + F G V R+I +R + RS+G GYV+F + AI
Sbjct: 173 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 232
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG----ASGGGTGPYSGGARRLYVGNLHFNM 364
+ G+ + G+P+ N S S AG A G P S + L++GNL FN
Sbjct: 233 MQGKEIDGRPI---------NCDMSTSKPAGNNDRAKKFGDTP-SEPSDTLFLGNLSFNA 282
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQL 416
D + ++F G V V++P ET KGFG+VQF+ +EDA+ AL+ L G+
Sbjct: 283 DRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEY 336
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 220 ESRDNDKESRRPKEKKEQVEPEVDPERDQR----TVFAYQICLKADERDVYEFFSRAGKV 275
ES+ +++ K++K E + P++ + T+FA + D+ + E F +
Sbjct: 227 ESKTKTEDASASKKRKADEEIDATPKKAKTEGAPTLFAGNLSWNIDDNALAEAFKEFEGL 286
Query: 276 RDVRLIMDRNSRRSKGVGYVEF---------YDVMSVPMAIALSGQPLLGQPVMVKPSEA 326
R++ DR+ RS+G GYV+F Y+ M L G+PL +P A
Sbjct: 287 VGARVVTDRDGGRSRGFGYVDFETPEAATKAYEAM---QGFELDGRPLNLDYANTRP--A 341
Query: 327 EKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL 386
E N + A G P S L++GNL F+ ++ +RQ F V V+LP
Sbjct: 342 ESNPRDRATDRAKKHGDSVSPES---ETLFIGNLPFDTDQETVRQFFAEVAEVTSVRLPT 398
Query: 387 D-ETGHCKGFGFVQFARLEDARNAL-NLNG 414
D ++G+ KGFG+V F +EDA+ LNG
Sbjct: 399 DPDSGNLKGFGYVSFNSVEDAKTVFQQLNG 428
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA 409
GA L+ GNL +N+ ++ L + F+ F + ++ D + G +GFG+V F E A A
Sbjct: 258 GAPTLFAGNLSWNIDDNALAEAFKEFEGLVGARVVTDRDGGRSRGFGYVDFETPEAATKA 317
Query: 410 LNLNGQLEIVGRAIKV 425
E+ GR + +
Sbjct: 318 YEAMQGFELDGRPLNL 333
>gi|349578366|dbj|GAA23532.1| K7_Nsr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 416
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + + F G V R+I +R + RS+G GYV+F + AI
Sbjct: 171 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 230
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG----ASGGGTGPYSGGARRLYVGNLHFNM 364
+ G+ + G+P+ N S S AG A G P S + L++GNL FN
Sbjct: 231 MQGKEIDGRPI---------NCDMSTSKPAGNNDRAKKFGDTP-SEPSDTLFLGNLSFNA 280
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQL 416
D + ++F G V V++P ET KGFG+VQF+ +EDA+ AL+ L G+
Sbjct: 281 DRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEY 334
>gi|6321599|ref|NP_011675.1| Nsr1p [Saccharomyces cerevisiae S288c]
gi|128576|sp|P27476.1|NSR1_YEAST RecName: Full=Nuclear localization sequence-binding protein;
AltName: Full=p67
gi|4058|emb|CAA40472.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae]
gi|1045265|emb|CAA59817.1| NSR1 [Saccharomyces cerevisiae]
gi|1323271|emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae]
gi|285812350|tpg|DAA08250.1| TPA: Nsr1p [Saccharomyces cerevisiae S288c]
gi|392299413|gb|EIW10507.1| Nsr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + + F G V R+I +R + RS+G GYV+F + AI
Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 228
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG----ASGGGTGPYSGGARRLYVGNLHFNM 364
+ G+ + G+P+ N S S AG A G P S + L++GNL FN
Sbjct: 229 MQGKEIDGRPI---------NCDMSTSKPAGNNDRAKKFGDTP-SEPSDTLFLGNLSFNA 278
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQL 416
D + ++F G V V++P ET KGFG+VQF+ +EDA+ AL+ L G+
Sbjct: 279 DRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEY 332
>gi|342887855|gb|EGU87283.1| hypothetical protein FOXB_02159 [Fusarium oxysporum Fo5176]
Length = 505
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 30/177 (16%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-A 308
T+FA + D+ +YE F + + R++ ++ + RS+G GYV+F D S A
Sbjct: 252 TLFAGSLSWSIDDNALYEAFKHIEGLANARVMTEKGTGRSRGFGYVDFNDAASCTKAYET 311
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARR-------------- 354
+ G L G+ + NL +N+ A A+ P S A R
Sbjct: 312 MQGVELEGRAI---------NLDYANARPADAN-----PQSRAADRAQRHGDTVSPESDT 357
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
L+VGNL F++ +D +R+ F V V+LP D ++G+ KGFG+V F +EDA+
Sbjct: 358 LFVGNLPFDVDQDTVREFFSEVAEVASVRLPTDPDSGNLKGFGYVSFNSVEDAKQVF 414
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 22/210 (10%)
Query: 231 PKEKKEQVEPEVDPERDQRT----------VFAYQICLKADERDVYEFFSRAGKVRDVRL 280
P +K++ EP+ P + +T +F + D+ + E F G+V R+
Sbjct: 225 PSKKRKADEPKEAPTKKSKTDAAESDKPATLFVGSLSWNVDDDMLKEEFKFCGEVVSARV 284
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSI-- 337
I DR + RSKG GYV+F A A G + G+ + V S + N +N S
Sbjct: 285 ITDRETGRSKGFGYVDFASPADAEKAHAEKQGAFIDGRQIKVDFSTGKSN---NNDSADR 341
Query: 338 AGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFG 396
A G T P S L+VGNL F+ ED + + F ++ ++LP D E+G KGFG
Sbjct: 342 AKKFGDVTSPES---DTLFVGNLPFDADEDVVSEFFGSVAEIKSLRLPTDQESGRRKGFG 398
Query: 397 FVQFARLEDARNALN-LNGQLEIVGRAIKV 425
+V F +EDA++A L+GQ I GR ++
Sbjct: 399 YVSFNSVEDAKSAFTQLSGQ-SINGRPCRL 427
>gi|255732796|ref|XP_002551321.1| hypothetical protein CTRG_05619 [Candida tropicalis MYA-3404]
gi|240131062|gb|EER30623.1| hypothetical protein CTRG_05619 [Candida tropicalis MYA-3404]
Length = 409
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 231 PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDV----------RL 280
PK + EPE + +R + V+ + + D+ F + K D+ R+
Sbjct: 90 PKPENAPEEPEKESKRSEFGVWIGNLSFDTTKEDIIRFIT--NKTIDLETKIENDDISRI 147
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGA 340
+ + + KG YV+ + V ++LS Q L G+ +++K + + + + S+ G+
Sbjct: 148 NIPKKGTQIKGFAYVDLPSLNHVQSVVSLSEQILNGRKLLIKNANSFEGRPEK-STTEGS 206
Query: 341 SGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLP-LDETGHCKGFGFVQ 399
S P S R L+VGNL F+ TED L + F G + +++ +TG CKGF F+
Sbjct: 207 SSASKNPPS---RILFVGNLSFDTTEDNLEEHFRHCGDITRIRMATFQDTGKCKGFAFID 263
Query: 400 FARLEDARNALNLNGQLEIVGRAIKVSAVTDQSG 433
F E A NALN + R +++ D+S
Sbjct: 264 FKNEEGATNALNSKLTKIFINRKLRMEYGEDRSA 297
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 22/186 (11%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
KK++VE +P T+F ++ D+ + F G V R+I +R + RS+G G
Sbjct: 176 KKQKVELSGEPA----TIFVGRLSWSIDDEWLKNEFDHIGGVVSARVIYERGTDRSRGYG 231
Query: 294 YVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG------ASGGGTG 346
YV+F D A+ + G+ + G+P+ N S S AG A G
Sbjct: 232 YVDFEDKSYAEKAVKEMHGKEIDGRPI---------NCDLSTSKPAGNPRDDRAKKFGDL 282
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
P S + L++GNL FN D + ++F FG + V++P ET KGFG+VQ+ ++D
Sbjct: 283 P-SEPSETLFLGNLSFNADRDNIYEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGNVDD 341
Query: 406 ARNALN 411
A+ AL+
Sbjct: 342 AKKALD 347
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 30/226 (13%)
Query: 213 KEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRA 272
K+R+ E ES K+S+ Q E E + +F + DE + + F
Sbjct: 234 KKRKAEEESASTPKKSK-------QAEEETGASAN---LFIGNLSWNVDEDWLRQEFETF 283
Query: 273 GKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMA------IALSGQPL-----LGQPVMV 321
G++ VR++ DR+S RS+G GYVE+ A L G+ + G+P
Sbjct: 284 GELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYKAKKDTELDGRKINLDYATGRPANN 343
Query: 322 KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVEL 381
+ ++ Q+ A + G + P S L+VGNL F+ ED ++++F G++
Sbjct: 344 QQGGGFQDRAQAR---ARSFGDQSSPES---DTLFVGNLPFSANEDSVQELFGEKGSIVG 397
Query: 382 VQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
++LP D ++G KGFG+VQFA +++AR A N LNG E+ GR +++
Sbjct: 398 IRLPTDPDSGRPKGFGYVQFASVDEAREAFNSLNG-AELDGRPVRL 442
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 13/114 (11%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDAR 407
+G + L++GNL +N+ ED LRQ FE FG + V++ D ++G +GFG+V++ DA
Sbjct: 256 TGASANLFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAA 315
Query: 408 NALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRA 461
A E+ GR I + T + ++ +GGG A++RA
Sbjct: 316 KAYKAKKDTELDGRKINLDYATGRPA------------NNQQGGGFQDRAQARA 357
>gi|50305507|ref|XP_452713.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641846|emb|CAH01564.1| KLLA0C11495p [Kluyveromyces lactis]
Length = 445
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 23/223 (10%)
Query: 233 EKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 292
EK E +P+ + + T+F ++ D+ + F G V R++ +R + RS+G
Sbjct: 180 EKSESKKPKTELAGEPATIFVGRLSWSIDDEWLKTEFEPIGGVISARVMYERGTDRSRGY 239
Query: 293 GYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG------ASGGGT 345
GYV+F D AI + G+ + G+P+ N S S AG A G
Sbjct: 240 GYVDFEDKSYAEKAIKEMHGKEIDGRPI---------NCDMSTSKPAGAPRDDRAKKFGD 290
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLE 404
P S + L++GNL F D L ++F +G + V++P ET KGFG+VQ+ +E
Sbjct: 291 VP-SEPSDTLFLGNLSFEADRDNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQYGSIE 349
Query: 405 DARNAL-NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFD 446
DA A L G+ I R +++ + Q+ G N G F+
Sbjct: 350 DATKAFEGLQGEY-INNRPVRLDYSIPK---QNFGNNQRGGFN 388
>gi|385305287|gb|EIF49275.1| nuclear localization sequence binding protein [Dekkera bruxellensis
AWRI1499]
Length = 358
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 19/218 (8%)
Query: 222 RDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFF--SRAGKVRDVR 279
R D + P+ KK + E + + T+F ++ D+ + +FF V R
Sbjct: 84 RKADDDXXEPEAKKAKSEESAE---EPGTMFVGRLSWNVDDDGLKQFFVDENVPGVXSAR 140
Query: 280 LIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMV-----KPSEAEKNLVQS 333
+I + S RSKG GYV+F V A+ G + G+ V + KP + N +
Sbjct: 141 VITENGSGRSKGFGYVDFDSVAHAEAAVKKYDGAEIDGRAVHLDMAASKPRSSSPNDRAN 200
Query: 334 NSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL-DETGHC 392
N A G P S + L+VGNL F T D +R FE FG++E +++P T
Sbjct: 201 NR----AKKYGDTP-SEPSDTLFVGNLSFEATMDDVRGAFESFGSIEXIRIPTRPGTEDP 255
Query: 393 KGFGFVQFARLEDARNALN-LNGQLEIVGRAIKVSAVT 429
+GF +VQF+ +E+A+ AL+ +NG+ I GR++++ T
Sbjct: 256 RGFAYVQFSSVEEAKAALDGMNGEY-INGRSVRLDYST 292
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-- 308
+F + DE + F G++ VR++ DR+S RS+G GYVEF + A A
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 292
Query: 309 ----LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
L G+ L + + A K QS + G T P S L++GN+ F+
Sbjct: 293 KDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQ---TSPES---DTLFIGNIAFSA 346
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRA 422
E+ + + F G++ V+LP D E+G KGFG+VQF+ +++AR+A LNG ++ GR+
Sbjct: 347 NENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQALNGA-DLGGRS 405
Query: 423 IKV 425
+++
Sbjct: 406 MRL 408
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 222 RDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
R N R + + + + PE D T+F I A+E + E F+ G + VRL
Sbjct: 310 RSNAAPKERAQSRAQNFGDQTSPESD--TLFIGNIAFSANENMISEAFAEHGSILGVRLP 367
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKN 329
D S R KG GYV+F V A AL+G L G+ + + S +N
Sbjct: 368 TDPESGRPKGFGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQN 416
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
E + T+F ++ D+ + + F G V R+IM+R + RS+G GYV+F D
Sbjct: 158 EGEPATIFVGRLSWSIDDEWLKKEFEHIGGVVSARVIMERGTDRSRGYGYVDFEDKSYAE 217
Query: 305 MAIA-LSGQPLLGQPVMV-----KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
AI + G+ + G+ + V KP+ + + + S + L++G
Sbjct: 218 KAIKEMQGKEIDGREINVDMSTSKPAAGNNDRAKKFGDVP----------SEPSETLFLG 267
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
NL FN D + ++F +G + V++P ET KGFG+VQ+ +EDA+ AL
Sbjct: 268 NLSFNADRDAISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVEDAKKAL 320
>gi|327305337|ref|XP_003237360.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326460358|gb|EGD85811.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 422
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 26/197 (13%)
Query: 227 ESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
E P KK +V+ PE +F + DE + F G++ R++ DR S
Sbjct: 218 EEAEPVAKKAKVD---VPEGASANLFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRES 274
Query: 287 RRSKGVGYVEFYDVMSVPMA------IALSGQPL------LGQPVMVKPSEAEKNLVQSN 334
RS+G GYVEF +V A + L G+ + P E N +S
Sbjct: 275 GRSRGFGYVEFVNVEDAVKAHAAKKDVELDGRKMNLDYANARANGNANPRERADNRAKS- 333
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCK 393
G T P S L++GN+ F+ E+ ++++F +G ++ ++LP D E+G K
Sbjct: 334 ------FGDQTSPESD---TLFIGNISFSADENMVQELFSKYGMIQGIRLPTDPESGRPK 384
Query: 394 GFGFVQFARLEDARNAL 410
GFG+VQF+ +++AR AL
Sbjct: 385 GFGYVQFSSVDEARAAL 401
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 6/163 (3%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + + F G V R+I +R + RS+G GYV+F + AI
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAEKAIQE 201
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
+ G+ + G+P+ S ++ N++ A G P S + L++GNL FN D
Sbjct: 202 MQGKEIDGRPINCDLSTSKP---AGNNTNDRAKKFGDTP-SEPSDTLFLGNLSFNADRDT 257
Query: 369 LRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
+ ++F G V V++P ET KGFG+VQF+ LED++ AL
Sbjct: 258 IFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKAL 300
>gi|255730137|ref|XP_002549993.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131950|gb|EER31508.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 442
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + F G V R+IM+R + +S+G GYV+F A+A
Sbjct: 216 TLFVGRLSWNIDDDWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFEGKSFAEKALAE 275
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
+ G+ + G+P+ + S + + +SN A G P S L++GNL FN D
Sbjct: 276 MQGKEIDGRPINLDMSTGKPHASKSNDR-AKQFGDSQSPPS---DTLFIGNLSFNANRDG 331
Query: 369 LRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
L F +G V ++P +T KGFG+VQF+ +++A+ AL LNGQ I GR ++
Sbjct: 332 LFNTFGEYGNVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGQY-IEGRPCRL 389
>gi|145492248|ref|XP_001432122.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399231|emb|CAK64725.1| unnamed protein product [Paramecium tetraurelia]
Length = 559
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS 310
VF + A E+D+ EFF G + V L+ N SKG+ +V F A+ S
Sbjct: 313 VFVRGLSFDATEQDIKEFFDECGNINSVNLLKGPNGN-SKGIAFVRFSTEDGQSAAVEYS 371
Query: 311 GQPLLGQPVMV---KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTED 367
GQ +G+ + V KP + SG + ++GN+ F TED
Sbjct: 372 GQEHMGRTITVEKTKPRDQRPQQGGQQGG------------SGESTTCFIGNMSFYATED 419
Query: 368 QLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
L VFE G ++ V++ D G +GFG+V+F E A+ L G ++ GRAI+V
Sbjct: 420 SLYPVFEDCGKIKEVRIAKDAEGKSRGFGYVEFFDNESAQKGLAKTG-TDVEGRAIRV 476
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIAL 309
T F + A E +Y F GK+++VR+ D + S+G GYVEF+D S +A
Sbjct: 406 TCFIGNMSFYATEDSLYPVFEDCGKIKEVRIAKDAEGK-SRGFGYVEFFDNESAQKGLAK 464
Query: 310 SGQPLLGQPVMV 321
+G + G+ + V
Sbjct: 465 TGTDVEGRAIRV 476
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 6/163 (3%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + + F G V R+I +R + RS+G GYV+F + AI
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAEKAIQE 201
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
+ G+ + G+P+ S ++ N++ A G P S + L++GNL FN D
Sbjct: 202 MQGKEIDGRPINCDLSTSKP---AGNNTNDRAKKFGDTP-SEPSDTLFLGNLSFNADRDT 257
Query: 369 LRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
+ ++F G V V++P ET KGFG+VQF+ LED++ AL
Sbjct: 258 IFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKAL 300
>gi|254564703|ref|XP_002489462.1| Protein of unknown function, localizes to the nucleolus and
nucleoplasm [Komagataella pastoris GS115]
gi|238029258|emb|CAY67181.1| Protein of unknown function, localizes to the nucleolus and
nucleoplasm [Komagataella pastoris GS115]
gi|328349891|emb|CCA36291.1| Uncharacterized RNA-binding protein C660.15 [Komagataella pastoris
CBS 7435]
Length = 385
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 278 VRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA-----EKNLVQ 332
R+ + + + +G YV+F VP+ I+LS Q L G+ +++K + + EK+ Q
Sbjct: 135 TRINLPKKGPKIRGFAYVDFDKPELVPVCISLSEQSLNGRNLLIKDANSFEGRPEKSKQQ 194
Query: 333 SNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLP-LDETGH 391
G SG P S R L+VGNL F+ T++ L + F+ G + +++ +++G
Sbjct: 195 QT---GGDSGKNKNPPS---RILFVGNLSFDTTKEDLEEHFQHCGNIVKIRMATFEDSGK 248
Query: 392 CKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQS 432
CKGF F+ F +E A NALN +VGR +++ D+S
Sbjct: 249 CKGFAFIDFLDVEGATNALNDKLCKRMVGRPLRMEYGEDRS 289
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 15/194 (7%)
Query: 219 RESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDV 278
R++ D ++ES PK+ K EP TVF ++ D+ + + F G V
Sbjct: 155 RKAEDEEEESS-PKKAKTDGEPA--------TVFVGRLSWSIDDEWLKQEFEHIGGVVAA 205
Query: 279 RLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSI 337
R++ +R + RS+G GYV+F D A+ + G+ + G+P+ V S ++ + N
Sbjct: 206 RVMYERGTDRSRGYGYVDFEDKSYAEKAVKEMHGKEIDGRPINVDMSTSKPTV---NPRE 262
Query: 338 AGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFG 396
G P S + L++GNL FN D + ++F FG + V++P ET KGFG
Sbjct: 263 DRQKRFGDIP-SEPSDTLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFG 321
Query: 397 FVQFARLEDARNAL 410
+VQ+ ++DA+ AL
Sbjct: 322 YVQYTSIDDAKKAL 335
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 15/183 (8%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMA---- 306
+F + DE + F G++ VR++ DR+S RS+G GYVEF + A
Sbjct: 263 LFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVNAADAAKAHAAK 322
Query: 307 --IALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+ L G+ L + + A + QS + G S + L++GN+ F+
Sbjct: 323 KDVELDGRKLNIDFANARSNAAPRERAQSRAQNFGDQA------SPESDTLFIGNISFSA 376
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRA 422
E+ + + F G++ V+LP D E+G KGFG+VQF+ +++AR+A LNG ++ GR
Sbjct: 377 DENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGA-DLGGRP 435
Query: 423 IKV 425
+++
Sbjct: 436 MRL 438
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 221 SRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL 280
+R N R + + + + PE D T+F I ADE + E FS G + VRL
Sbjct: 339 ARSNAAPRERAQSRAQNFGDQASPESD--TLFIGNISFSADENMISEAFSEHGSILGVRL 396
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKN 329
D S R KG GYV+F V A L+G L G+P+ + S +N
Sbjct: 397 PTDPESGRPKGFGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQN 446
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 8/206 (3%)
Query: 227 ESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
E P KK +VE E E + +F + DE + F G++ R+I DR +
Sbjct: 200 EVAEPIVKKSKVE-EPAAEEGVKNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRET 258
Query: 287 RRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT 345
R+KG GYVEF + A + L G+ + V S + + A G
Sbjct: 259 GRAKGFGYVEFANAADAAKAQKEMHEYELDGRQLNVDFSTPRAKPDANGGARANKYGDKR 318
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLE 404
P S L++GN+ F + + +++VF +G++ V LP D +TG KGFG+V F+ +
Sbjct: 319 SPPS---NTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQ 375
Query: 405 DARNALN-LNGQLEIVGRAIKVSAVT 429
+A AL LNGQ +I GRAI++ T
Sbjct: 376 EATAALEALNGQ-DIGGRAIRIDYAT 400
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F + D+ + E F G V R+I DR S RSKG GYV+F A
Sbjct: 240 TLFVGNLSWNVDDAMLAEEFKFCGTVTSARVITDRESGRSKGFGYVDFATPEEAEKAHGE 299
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG-PYSGGARRLYVGNLHFNMTED 367
G + G+ + V S + +++ AGA G S + L+VGNL F+ ED
Sbjct: 300 KQGAFIDGREIKVDFSTGK---ATNSNDAAGARAKKYGDTVSPESDTLFVGNLPFDADED 356
Query: 368 QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGR 421
+ F V+ ++LP + E+G KGFG+V F +EDA++A LNGQ I GR
Sbjct: 357 SVGAFFSEVAEVKSLRLPTEQESGRRKGFGYVTFNSVEDAKSAFEQLNGQ-SINGR 411
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 23/180 (12%)
Query: 243 DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMS 302
D D + +F + D+ + + F + G+V R+I +R + RSKG GYV+F
Sbjct: 395 DASGDIKNLFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPED 454
Query: 303 VPMAI-ALSGQPLLGQPVMV--------KPSEAEKNLVQSNSSIAGASGGGTGPYSGGAR 353
A+ A++G + G+ + V +P + +++ Q S
Sbjct: 455 ARKAVEAMAGTEIDGRTINVDFSAPKPERPPQEKRSFGQEE-------------LSAPTT 501
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNL 412
L++GNL F+ T+D + + F +G + V+LP D ET KGFG+V+FA E A A+N+
Sbjct: 502 TLFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVEFATQEAATAAVNV 561
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGH--CKGFGFVQFARLEDA 406
SG + L+VG L +N+ +D L++ FE FG V ++ + E G KGFG+V FA EDA
Sbjct: 397 SGDIKNLFVGGLSWNVDDDWLKKEFEKFGEVISARV-ITERGTERSKGFGYVDFASPEDA 455
Query: 407 RNALNLNGQLEIVGRAIKV 425
R A+ EI GR I V
Sbjct: 456 RKAVEAMAGTEIDGRTINV 474
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 226 KESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRN 285
K R P+EK+ + E+ T+F + A + VYE FS G + VRL D
Sbjct: 480 KPERPPQEKRSFGQEELS--APTTTLFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPE 537
Query: 286 SRRSKGVGYVEF 297
+ R KG GYVEF
Sbjct: 538 TERIKGFGYVEF 549
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 15/183 (8%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMA---- 306
+F + DE + F G++ VR++ DR+S RS+G GYVEF D A
Sbjct: 261 LFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVDAADAAKAHAAK 320
Query: 307 --IALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
+ L G+ L + + A + QS + G S + L++GN+ F+
Sbjct: 321 KDVELDGRKLNIDFANARSNAAPRERAQSRAQNFGDQA------SPESDTLFIGNISFSA 374
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRA 422
E+ + + F G++ V+LP D E+G KGFG+VQF+ +++AR+A LNG ++ GR
Sbjct: 375 DENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGA-DLGGRP 433
Query: 423 IKV 425
+++
Sbjct: 434 MRL 436
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 221 SRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL 280
+R N R + + + + PE D T+F I ADE + E FS G + VRL
Sbjct: 337 ARSNAAPRERAQSRAQNFGDQASPESD--TLFIGNISFSADENMISEAFSEHGSILGVRL 394
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKN 329
D S R KG GYV+F V A L+G L G+P+ + S +N
Sbjct: 395 PTDPESGRPKGFGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQN 444
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 17/186 (9%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMS-VPMAIAL 309
+F + DE + F G++ VR++ +R++ RS+G GYVE+ + V A A
Sbjct: 197 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEY---TNAVDAAKAF 253
Query: 310 SGQ---PLLGQPVMV-----KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLH 361
+ + G+ + + +P+ E+ Q + S G S + L+VGN+
Sbjct: 254 EAKRDTEIDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQA--SPESDTLFVGNIP 311
Query: 362 FNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIV 419
F+ ED L +VF G++ ++LP D E+G KGFG+VQF+ +E+AR A N LNG EI
Sbjct: 312 FSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREAFNELNG-AEID 370
Query: 420 GRAIKV 425
GR +++
Sbjct: 371 GRPVRL 376
>gi|238879474|gb|EEQ43112.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 399
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + F G V R+IM+R + +S+G GYV+F + A+
Sbjct: 169 TLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEE 228
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
+ G+ + G+P+ + S + + +SN+ A G P S L++GNL FN D
Sbjct: 229 MQGKEIDGRPINLDMSTGKPHASKSNNDRAKQYGDSQSPPS---DTLFIGNLSFNANRDN 285
Query: 369 LRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL------NLNG 414
L VF +G V ++P +T KGFG+VQF+ +++A+ AL + G
Sbjct: 286 LFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIEG 338
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + F G V R+I +R + RS+G GYV+F + A+
Sbjct: 179 TIFVGRLSWSVDDEWLKNEFEHIGDVIGARVIYERGTDRSRGYGYVDFSSKSAAERAVKE 238
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGG------GTGPYSGGARRLYVGNLHF 362
+ G+ + G+ E N S S AG +GG G P S + L++GNL F
Sbjct: 239 MHGKQIDGR---------EINCDMSTSKPAGGNGGDRAKKFGDVP-SQPSDTLFLGNLSF 288
Query: 363 NMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN 411
N DQ+ ++F G + V+LP ET KGFG+VQ+ + DA++AL+
Sbjct: 289 NADRDQIYELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVNDAQSALD 338
>gi|68473894|ref|XP_719050.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|68474099|ref|XP_718946.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440741|gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440849|gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + F G V R+IM+R + +S+G GYV+F + A+
Sbjct: 169 TLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEE 228
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
+ G+ + G+P+ + S + + +SN+ A G P S L++GNL FN D
Sbjct: 229 MQGKEIDGRPINLDMSTGKPHASKSNNDRAKQYGDSQSPPS---DTLFIGNLSFNANRDN 285
Query: 369 LRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL------NLNG 414
L VF +G V ++P +T KGFG+VQF+ +++A+ AL + G
Sbjct: 286 LFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIEG 338
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI- 307
+ +F + DE + F + G++ VR++ DR S RSKG GYVE+ + A+
Sbjct: 302 KNLFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGYVEYTTNEAAKKALE 361
Query: 308 ALSGQPLLGQPVMVKPSEA-EKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTE 366
+ G+ + G+ + V S +N Q S + G S + ++V NL F E
Sbjct: 362 EMKGKDIDGRTINVDFSAPRPENPRQDRSRLYGDQ------KSPESETVFVANLSFEADE 415
Query: 367 DQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRAIK 424
++ FE FG + +++P D E+G KGF ++Q+ R++ AR A+ +NG L + GRAI+
Sbjct: 416 QIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSARKAVEEMNGAL-VAGRAIR 474
Query: 425 V 425
Sbjct: 475 T 475
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-A 308
T+F ++ D+ + + F G V R++M+R + RS+G GYV+F + S A+
Sbjct: 127 TLFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDFDNKASAEKALEE 186
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQS-NSSIAGASGGGTGPYSGGARRLYVGNLHFNMTED 367
+ G+ + G+P+ V S ++ + N+ A G P S L++GNL F D
Sbjct: 187 MQGKEIDGRPINVDMSNSKPAAPAARNNDRASQYGDKRSPPS---DTLFLGNLSFQADRD 243
Query: 368 QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQ 415
L ++F G V V++P ET KGFG+VQF+ +++A AL LNG+
Sbjct: 244 TLFELFSKHGNVTSVRIPTHPETEQPKGFGYVQFSSVDEATGALEALNGE 293
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
L+VG L +++ ++ L++ FE G V ++ ++ TG +G+G+V F A AL
Sbjct: 128 LFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDFDNKASAEKALEEM 187
Query: 414 GQLEIVGRAIKV 425
EI GR I V
Sbjct: 188 QGKEIDGRPINV 199
>gi|302926157|ref|XP_003054238.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
gi|256735179|gb|EEU48525.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
Length = 507
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 27/203 (13%)
Query: 234 KKEQVEPEVDPERDQRT-------VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
KK + E ++D + ++T +FA + D+ +YE F + R++ ++ +
Sbjct: 229 KKRKAEDDIDSDEAKKTKTDAPTTLFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEKGT 288
Query: 287 RRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT 345
RS+G GYV+F D A A+ G L G+ + NL +N+ A A+ G
Sbjct: 289 GRSRGFGYVDFNDPEGCTKAYEAMQGFELDGRAL---------NLDYANARPADANPAGR 339
Query: 346 GP---------YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGF 395
S + L+VGNL F++ +D +R+ F V V+LP D ++G+ KGF
Sbjct: 340 AADRAKRHGDTLSPESDTLFVGNLPFDVDQDAVREFFGEVAEVASVRLPTDPDSGNLKGF 399
Query: 396 GFVQFARLEDARNALNLNGQLEI 418
G+V F +EDA+ ++ I
Sbjct: 400 GYVSFNSVEDAKAVIDAKNGAPI 422
>gi|427776813|gb|JAA53858.1| Putative rna-binding protein sart3 rrm superfamily [Rhipicephalus
pulchellus]
Length = 936
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 243 DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMS 302
DP ++ RTVF + +E + E F G++ ++RL+ D R SKG GY+ F + S
Sbjct: 660 DPLKEIRTVFLSNLAYDVEESQIEEAFKEVGEIEELRLVRDYKGR-SKGFGYLVFTHMQS 718
Query: 303 VPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHF 362
V A+ P+ G+PV V E+N + + + +L+V + F
Sbjct: 719 VEAALKRDRTPVNGRPVFVSKCN-ERNQFRFRTGME-------------KNKLFVKGIPF 764
Query: 363 NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
++TE +L ++F +G ++ V+L GH KG +V++A A AL
Sbjct: 765 SVTEKELEELFGKYGELKGVRLVTYRNGHSKGIAYVEYANETSATVAL 812
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+F I E+++ E F + G+++ VRL+ RN SKG+ YVE+ + S +A+
Sbjct: 757 LFVKGIPFSVTEKELEELFGKYGELKGVRLVTYRNGH-SKGIAYVEYANETSATVALV 813
>gi|384490131|gb|EIE81353.1| hypothetical protein RO3G_06058 [Rhizopus delemar RA 99-880]
Length = 423
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 247 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMA 306
D T++ + ++ DV EFF G+++DVR+ MD + +++G +V+F A
Sbjct: 198 DVYTIWCGGLNYQSTADDVREFFGSCGEIKDVRIRMDDATGKNRGFCHVDFATQEGKEAA 257
Query: 307 IALSGQPLLGQPVMVKPSE-AEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMT 365
+A+SG +G+ + + ++ + + V+ S YS ++++ NL+ +
Sbjct: 258 LAMSGNEFMGRKIRLDGADGSTRQRVKKEES-----------YSSATSKVFIANLNHDHD 306
Query: 366 EDQ----LRQVFEPFGT-VELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIV 419
E L + F FGT V ++LP + ETG KG G+++F E A A+ +EI
Sbjct: 307 EQSHRAALTEAFSQFGTIVGDIRLPYNRETGGLKGIGYIEFETKEQAEAAVKGMSGVEIN 366
Query: 420 GRAIKVSAVTDQSGLQD 436
GR ++ TD SG D
Sbjct: 367 GRPLR----TDFSGEND 379
>gi|15222009|ref|NP_175322.1| nucleolin [Arabidopsis thaliana]
gi|75334377|sp|Q9FVQ1.1|NUCL1_ARATH RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1;
Short=AtNUC-L1; AltName: Full=Protein PARALLEL 1;
Short=AtPARL1
gi|11094815|gb|AAG29744.1|AC084414_12 nuM1 protein, putative [Arabidopsis thaliana]
gi|28973759|gb|AAO64195.1| putative nucleolin [Arabidopsis thaliana]
gi|332194246|gb|AEE32367.1| nucleolin [Arabidopsis thaliana]
Length = 557
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+FA + + DV FF AG+V DVR +R+ +G G+VEF A+
Sbjct: 297 KTLFAANLSFNIERADVENFFKEAGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKALE 356
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASG----GGTGPYSGGARRLYVGNLHFNM 364
G+PLLG+ + + ++ E+ + SG GG G G ++++V ++
Sbjct: 357 FHGRPLLGREIRLDIAQ-ERGERGERPAFTPQSGNFRSGGDG---GDEKKIFVKGFDASL 412
Query: 365 TED----QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNG 414
+ED LR+ F G ++ V +P+D +TG+ KG +++F+ E AL LNG
Sbjct: 413 SEDDIKNTLREHFSSCGEIKNVSVPIDRDTGNSKGIAYLEFS--EGKEKALELNG 465
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
P +GG++ L+ NL FN+ + F+ G V V+ + + G +GFG V+FA E+
Sbjct: 291 PAAGGSKTLFAANLSFNIERADVENFFKEAGEVVDVRFSTNRDDGSFRGFGHVEFASSEE 350
Query: 406 ARNALNLNGQLEIVGRAIKV 425
A+ AL +G+ ++GR I++
Sbjct: 351 AQKALEFHGR-PLLGREIRL 369
>gi|255713222|ref|XP_002552893.1| KLTH0D03916p [Lachancea thermotolerans]
gi|238934273|emb|CAR22455.1| KLTH0D03916p [Lachancea thermotolerans CBS 6340]
Length = 505
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + F G V R+IM+R + RS+G GYV+F + A+
Sbjct: 257 TIFVGRLSWSVDDEWLKTEFEPIGGVISARVIMERGTDRSRGYGYVDFENKFYAEKAVKE 316
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG------ASGGGTGPYSGGARRLYVGNLHF 362
+ G+ + G+P+ N S S AG A G P S + L++GNL F
Sbjct: 317 MHGKEIDGRPI---------NCDMSTSKPAGNPRNDRAKQFGDTP-SQPSDTLFLGNLSF 366
Query: 363 NMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
N D + + F G V V+LP ET KGFG+VQ++ +++A+ A
Sbjct: 367 NADRDNIFETFAEHGEVVSVRLPTHPETNQPKGFGYVQYSSVDEAQKAF 415
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 14/218 (6%)
Query: 217 KERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
K+R++ D + S + + +E E + + +F + D+ +Y F G++
Sbjct: 213 KKRKAEDEPEASTKKSKTEETAE-----DNGSKNLFVGNLSWNIDDEWLYREFEEFGEIS 267
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLL-GQPVMV---KPSEAEKNLVQ 332
R+I D+ + RSKG GYVEF A+A L+ G+ V P + +
Sbjct: 268 GARVISDKATGRSKGFGYVEFVKSSDAAAALAAKKGALIDGREANVDFSTPRDTTAPRER 327
Query: 333 SNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGH 391
+N+ A G P S L++GNL F+ E+ + + F GTV V+LP D ETG+
Sbjct: 328 ANNR-AAQFGDAKNPPS---DTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGN 383
Query: 392 CKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 429
KGFG+V F +EDA A + +I GR +++ T
Sbjct: 384 PKGFGYVTFGSVEDATAAYDAMMGADIAGRPVRLDYAT 421
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF-YDVMSVPMAI 307
+ +F + DE + F G++ R+I DR + R+KG GYVEF +
Sbjct: 235 KNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAKAQK 294
Query: 308 ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTED 367
+ L G+P+ V S Q + A A+ G S + L++GNL F+ T +
Sbjct: 295 DMHEYELDGRPLNVDFSTPR----QKPDANARANKFGDK-RSAPSNTLFIGNLSFDCTNE 349
Query: 368 QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
+++VF +G V V LP D ++G KGFG+V F E+A AL L+GQ ++ GR ++V
Sbjct: 350 TIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALEALHGQ-DVAGRPLRV 408
>gi|427791903|gb|JAA61403.1| Putative rna-binding protein sart3 rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 598
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 243 DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMS 302
DP ++ RTVF + +E + E F G++ ++RL+ D R SKG GY+ F + S
Sbjct: 428 DPLKEIRTVFLSNLAYDVEESQIEEAFKEVGEIEELRLVRDYKGR-SKGFGYLVFTHMQS 486
Query: 303 VPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHF 362
V A+ P+ G+PV V E+N + + + +L+V + F
Sbjct: 487 VEAALKRDRTPVNGRPVFVSKCN-ERNQFRFRTGME-------------KNKLFVKGIPF 532
Query: 363 NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
++TE +L ++F +G ++ V+L GH KG +V++A A AL
Sbjct: 533 SVTEKELEELFGKYGELKGVRLVTYRNGHSKGIAYVEYANETSATVAL 580
>gi|378755700|gb|EHY65726.1| hypothetical protein NERG_01333 [Nematocida sp. 1 ERTm2]
Length = 316
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
+D+RT+F + A E ++ E F + G++ +VR+ R+ KG GYVEF +
Sbjct: 88 KDERTIFIKGLNFSATEDELKELFGQFGEIVEVRIPRSRDGPGGKGFGYVEFESKEACEK 147
Query: 306 AIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMT 365
+ +L+G G+ ++V ++ +S A G +++GN+ F++
Sbjct: 148 SRSLNGTDYNGRTIVV-------DMARSGQKGGAAGTEGRVFNKTDDNTVFLGNIPFDVD 200
Query: 366 EDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
D L + + V +++P D ETG KGF F E+AR +N N + + RAI+
Sbjct: 201 HDDLLAHLKTYAEVTQIRIPEDRETGRPKGFAFASCETTEEARKLINSN--ITYMDRAIR 258
Query: 425 VSAVTDQSGLQDLGANTTGDFDDDEGG 451
++ G N+ G D++ G
Sbjct: 259 AQPSERKNNSAPRGGNSFGRRDNNSFG 285
>gi|154296105|ref|XP_001548485.1| hypothetical protein BC1G_12782 [Botryotinia fuckeliana B05.10]
Length = 518
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 14/218 (6%)
Query: 217 KERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
K+R++ D + S + + +E E + + +F + D+ +Y F G++
Sbjct: 239 KKRKAEDEPEASTKKSKTEETAE-----DNGSKNLFVGNLSWNIDDEWLYREFEEFGEIS 293
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLL-GQPVMV---KPSEAEKNLVQ 332
R+I D+ + RSKG GYVEF A+A L+ G+ V P + +
Sbjct: 294 GARVISDKATGRSKGFGYVEFVKSSDAAAALAAKKGALIDGREANVDFSTPRDTTAPRER 353
Query: 333 SNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGH 391
+N+ A G P S L++GNL F+ E+ + + F GTV V+LP D ETG+
Sbjct: 354 ANNR-AAQFGDAKNPPS---DTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGN 409
Query: 392 CKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVT 429
KGFG+V F +EDA A + +I GR +++ T
Sbjct: 410 PKGFGYVTFGSVEDATAAYDAMMGADIAGRPVRLDYAT 447
>gi|67537390|ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|40741753|gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|259482272|tpe|CBF76595.1| TPA: nucleolin protein Nsr1, putative (AFU_orthologue;
AFUA_3G07710) [Aspergillus nidulans FGSC A4]
Length = 524
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-- 308
+F + E +++ F + G++ R++ +R++ RS+G GYVEF + A
Sbjct: 279 LFVGNLSWNVTEEWLHQEFEQFGEL-SARIMTERDTGRSRGFGYVEFTNAADAAKAYEAM 337
Query: 309 ----LSGQPLLGQPVMVKPSEAEKNLVQSNS-SIAGASGGGTGPYSGGARRLYVGNLHFN 363
+ G+ + +P+ ++ + + + A + G T P S L+VGNL F+
Sbjct: 338 KEHEIDGRKINLDYATGRPANKDQGGFKERAQNRARSFGDQTSPES---DTLFVGNLPFS 394
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRA 422
ED + +VF P G V ++LP D E+G KGFG+VQ++ +++AR A N EI GR
Sbjct: 395 ANEDSVHEVFGPQGNVLGIRLPTDMESGRPKGFGYVQYSSVDEARKAYNELQGAEIDGRP 454
Query: 423 IKV 425
I++
Sbjct: 455 IRL 457
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 350 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNA 409
G + L+VGNL +N+TE+ L Q FE FG + + +TG +GFG+V+F DA A
Sbjct: 274 GASANLFVGNLSWNVTEEWLHQEFEQFGELSARIMTERDTGRSRGFGYVEFTNAADAAKA 333
Query: 410 LNLNGQLEIVGRAIKVSAVT------DQSGLQDLGANTTGDFDD 447
+ EI GR I + T DQ G ++ N F D
Sbjct: 334 YEAMKEHEIDGRKINLDYATGRPANKDQGGFKERAQNRARSFGD 377
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 241 EVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDV 300
+ PE D T+F + A+E V+E F G V +RL D S R KG GYV++ V
Sbjct: 378 QTSPESD--TLFVGNLPFSANEDSVHEVFGPQGNVLGIRLPTDMESGRPKGFGYVQYSSV 435
Query: 301 MSVPMAI-ALSGQPLLGQPV 319
A L G + G+P+
Sbjct: 436 DEARKAYNELQGAEIDGRPI 455
>gi|196016887|ref|XP_002118293.1| hypothetical protein TRIADDRAFT_62320 [Trichoplax adhaerens]
gi|190579124|gb|EDV19227.1| hypothetical protein TRIADDRAFT_62320 [Trichoplax adhaerens]
Length = 930
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 247 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMA 306
++ +VF + A E D+ FFS G V+DVRL+ N + KG GYVEF D + A
Sbjct: 679 EKTSVFISNVPFSAVEDDIRSFFSTCGNVKDVRLVRAPNGK-FKGYGYVEFEDELVTQEA 737
Query: 307 IALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTE 366
+ L + G+PV V +N+ +S G G + L+V N +++
Sbjct: 738 LKLDRNTIAGRPVYVS-----ENVDKSKHPTEFKFGSGMDRCT-----LFVKNTK-DISS 786
Query: 367 DQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVS 426
D+LR+VF F + ++ ++G +GF +++F+ A NA+ EI G I V+
Sbjct: 787 DRLREVFNQFEGLRDIRCVARKSGRSRGFAYIEFSNEASAANAVKTLDNTEIDGVTISVA 846
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNG 414
+++ N+ F+ ED +R F G V+ V+L G KG+G+V+F + AL L+
Sbjct: 683 VFISNVPFSAVEDDIRSFFSTCGNVKDVRLVRAPNGKFKGYGYVEFEDELVTQEALKLDR 742
Query: 415 QLEIVGRAIKVSAVTDQS 432
I GR + VS D+S
Sbjct: 743 N-TIAGRPVYVSENVDKS 759
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF-YDVMSVPMAI 307
+ +F + DE + F G++ R+I DR + R+KG GYVEF +
Sbjct: 248 KNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAKAQK 307
Query: 308 ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTED 367
+ L G+P+ V S Q + A A+ G S + L++GNL F+ T +
Sbjct: 308 DMHEYELDGRPLNVDFSTPR----QKPDANARANKFGD-KRSAPSNTLFIGNLSFDCTNE 362
Query: 368 QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
+++VF +G V V LP D ++G KGFG+V F E+A AL L GQ ++ GR ++V
Sbjct: 363 TIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALEALQGQ-DVAGRPLRV 421
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 224 NDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMD 283
+D+ES K++K D + T+F ++ D+ + F G V R+I +
Sbjct: 142 DDEESSESKKQKP------DESEEPATIFVGRLSWSIDDEWLKTEFEPIGGVLSARVIYE 195
Query: 284 RNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASG 342
+ + RS+G GYV+F + AI + G+ + G+P+ N S S A G
Sbjct: 196 KGTDRSRGYGYVDFKNKTFAEKAIKEMQGKEIDGRPI---------NCDMSTSKPASNGG 246
Query: 343 G-----GTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFG 396
G P S + L++GNL F+ D + +VF +G + V++P ET KGFG
Sbjct: 247 DRAKKFGDTP-SEPSETLFLGNLSFDADRDNIYEVFSKYGEIISVRIPTHPETEQPKGFG 305
Query: 397 FVQFARLEDARNALN-LNGQLEIVGRAIKVSAVT 429
+VQ+ +E A+ AL+ L G+ I R +++ T
Sbjct: 306 YVQYGDVESAKKALDALQGEY-INNRPVRLDFST 338
>gi|663262|emb|CAA88179.1| gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 236 EQVEPE--------VDPERDQR---TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
+ EP P +D TVF ++ D++ + + F G + R+IMD
Sbjct: 239 RKAEPASEERPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDG 298
Query: 285 NSRRSKGVGYVEFYDVMSVPMAIALSG-QPLLGQPVMVK-PSEAEKNLVQSNSSIAGASG 342
S RSKG GYV+F + A+A +G + + G+ V + P+ N AG G
Sbjct: 299 QSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLPNPRPANPQPYAQQRAGNFG 358
Query: 343 GGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFA 401
S + ++VGNL FN TED L F G ++ ++LP D ++G KGFG+V F+
Sbjct: 359 DQ---LSEPSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFS 415
Query: 402 RLEDARNALNLNGQLEIVGRAIKV 425
++ A+ + +NG I GR ++
Sbjct: 416 DIDSAKKCVEMNGHF-IAGRPCRL 438
>gi|297847164|ref|XP_002891463.1| hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp.
lyrata]
gi|297337305|gb|EFH67722.1| hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp.
lyrata]
Length = 550
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+FA + + DV FF G+V DVR +R+ +G G+VEF A+
Sbjct: 294 KTLFAANLSFNIERSDVENFFKEVGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKALE 353
Query: 309 LSGQPLLGQPVMVKPS-------EAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLH 361
G+PLLG+ + + + E QS + +G GG ++++V
Sbjct: 354 FHGRPLLGREIRLDIAQERGERGERPAYTPQSGNYKSGGDGGDE-------KKVFVKGFD 406
Query: 362 FNMTEDQLRQV----FEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNG 414
+++ED +R F G ++ V +P+D +TG+ KG +V F+ E AL LNG
Sbjct: 407 SSLSEDDIRNALTEHFSSCGEIKSVSVPMDRDTGNSKGIAYVAFS--EGKEKALELNG 462
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
P +GG++ L+ NL FN+ + F+ G V V+ + + G +GFG V+FA E+
Sbjct: 288 PAAGGSKTLFAANLSFNIERSDVENFFKEVGEVVDVRFSTNRDDGSFRGFGHVEFASSEE 347
Query: 406 ARNALNLNGQLEIVGRAIKV 425
A+ AL +G+ ++GR I++
Sbjct: 348 AQKALEFHGR-PLLGREIRL 366
>gi|19114443|ref|NP_593531.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe 972h-]
gi|6226864|sp|P41891.2|GAR2_SCHPO RecName: Full=Protein gar2
gi|7523472|emb|CAB86413.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe]
Length = 500
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 236 EQVEPE--------VDPERDQR---TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
+ EP P +D TVF ++ D++ + + F G + R+IMD
Sbjct: 239 RKAEPASEERPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDG 298
Query: 285 NSRRSKGVGYVEFYDVMSVPMAIALSG-QPLLGQPVMVKPSEAEKNLVQSNSSIAGA--- 340
S RSKG GYV+F + A+A +G + + G+ V NL SN A
Sbjct: 299 QSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMV---------NLDLSNPRPANPQPY 349
Query: 341 ----SGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGF 395
+G S + ++VGNL FN TED L F G ++ ++LP D ++G KGF
Sbjct: 350 AQQRAGNFGDQLSEPSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGF 409
Query: 396 GFVQFARLEDARNALNLNGQLEIVGRAIKV 425
G+V F+ ++ A+ + +NG I GR ++
Sbjct: 410 GYVTFSDIDSAKKCVEMNGHF-IAGRPCRL 438
>gi|336267120|ref|XP_003348326.1| hypothetical protein SMAC_02824 [Sordaria macrospora k-hell]
Length = 377
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
KK + E D D+ T++ + D+ ++ F + R++ DR S RS+G G
Sbjct: 155 KKAKTEEVAD---DKSTLWVGNLGWGIDDAILFAEFEECEGAKSARVVTDRESGRSRGFG 211
Query: 294 YVEFYDVMSVPMAI-ALSGQPLLGQPVMVK-PSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
YV+F + A A SG L G+ + + S+ N Q+ ++ A G T S
Sbjct: 212 YVDFENNDQAQKAYDAKSGGLLEGREMRLDFASKDAGNKPQAKAADRAAKHGDT--ISPE 269
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
+ L+VGN+ F E + F +V +++P D E+G KGF +V F +EDA+NA
Sbjct: 270 SDTLFVGNMPFTADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAF 329
Query: 411 N-LNGQLEIVGRAIKV 425
+ LNG ++ GR +++
Sbjct: 330 DQLNGS-DLQGRPVRL 344
>gi|380091978|emb|CCC10246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 456
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
KK + E D D+ T++ + D+ ++ F + R++ DR S RS+G G
Sbjct: 155 KKAKTEEVAD---DKSTLWVGNLGWGIDDAILFAEFEECEGAKSARVVTDRESGRSRGFG 211
Query: 294 YVEFYDVMSVPMAI-ALSGQPLLGQPVMVK-PSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
YV+F + A A SG L G+ + + S+ N Q+ ++ A G T S
Sbjct: 212 YVDFENNDQAQKAYDAKSGGLLEGREMRLDFASKDAGNKPQAKAADRAAKHGDT--ISPE 269
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
+ L+VGN+ F E + F +V +++P D E+G KGF +V F +EDA+NA
Sbjct: 270 SDTLFVGNMPFTADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAF 329
Query: 411 N-LNGQLEIVGRAIKV 425
+ LNG ++ GR +++
Sbjct: 330 DQLNGS-DLQGRPVRL 344
>gi|1438951|gb|AAB04133.1| cutinase negative acting protein [Nectria haematococca mpVI]
Length = 507
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 27/203 (13%)
Query: 234 KKEQVEPEVDPERDQRT-------VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 286
KK + E ++D + ++T +FA + D+ +YE F + R++ ++ +
Sbjct: 229 KKRKAEDDIDSDEAKKTKTDAPTTLFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEKGT 288
Query: 287 RRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT 345
RS+G GYV+F D A A+ G L G+ + NL +N+ A A+ G
Sbjct: 289 GRSRGFGYVDFNDPEGCTKAYEAMQGFELDGRAL---------NLDYANARPADANPAGR 339
Query: 346 GP---------YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGF 395
S + L+VGNL ++ +D +R+ F V V+LP D ++G+ KGF
Sbjct: 340 AADRAKRHGDTLSPESDTLFVGNLPIDVDQDAVREFFGEVAEVASVRLPTDPDSGNLKGF 399
Query: 396 GFVQFARLEDARNALNLNGQLEI 418
G+V F +EDA+ ++ I
Sbjct: 400 GYVSFNSVEDAKAVIDAKNGAPI 422
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
ERD RT+F + + E D+ E F A +VR++M+++ S+G+ YVEF
Sbjct: 365 ERDARTLFLKNLPYRITEDDIREVFENA---LEVRIVMNKDGN-SRGMAYVEFKTEAEAD 420
Query: 305 MAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
A+ G + G+ V++ + EK+ Q N G + L V NL +
Sbjct: 421 KALEEKQGTEIEGRAVVIDFT-GEKSQ-QENQK-------------GESTTLIVNNLSYA 465
Query: 364 MTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAI 423
TE+ L++VF+ ++ ++P + G KG+ FV FA EDA+ ALN EI GR I
Sbjct: 466 ATEETLQEVFKKASSI---RVPQNNQGRPKGYAFVDFATAEDAKEALNSLNNTEIEGRTI 522
Query: 424 KV 425
++
Sbjct: 523 RL 524
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-A 308
T+ + A E + E F +A +R + N R KG +V+F A+ +
Sbjct: 456 TLIVNNLSYAATEETLQEVFKKASSIR----VPQNNQGRPKGYAFVDFATAEDAKEALNS 511
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
L+ + G+ + ++ S +N+ G + ++ L+V L + TE+
Sbjct: 512 LNNTEIEGRTIRLEFSSPSWQKGNTNARGGGGG------FGQQSKTLFVRGLSEDTTEET 565
Query: 369 LRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNA 409
LR+ FE G++ + +TG KGFGFV F+ EDA+ A
Sbjct: 566 LRESFE--GSISARIVTDRDTGSSKGFGFVDFSSPEDAKAA 604
>gi|330793087|ref|XP_003284617.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
gi|325085416|gb|EGC38823.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
Length = 829
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFG-TVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
A R+Y+G++++N+TE+Q+R +F FG + + ETG KG+GF+ F + A +AL
Sbjct: 621 ANRIYIGSINWNVTEEQIRGIFSQFGKIISCFLMQNTETGKHKGYGFIDFENKKSADDAL 680
Query: 411 NLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKL 467
+NG E++GRA+KV T + + +N + D EG + + R L QKL
Sbjct: 681 AMNG-FELLGRAMKVGRPTKGASANTI-SNGSIDKTSLEGEAMLTTSDQRIQLTQKL 735
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 540 IGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGF-VYLRF 598
+G ++CL+L+N P ++ D +ED+ C++FG+++ + ++ DS+ VY+ F
Sbjct: 736 LGNENKCLVLRNAGSP-----DDIDPSFEEDIRSGCNEFGEIEKLVIKTDSSTVRVYIVF 790
Query: 599 ENTQSAFAAQRALHGRWFAGKMITATF 625
+ S A Q L+G++F+ I A F
Sbjct: 791 KEAPSCVACQSKLNGKYFSYHCIKAEF 817
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 236 EQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYV 295
E + P V+ + ++ I E + FS+ GK+ L+ + + + KG G++
Sbjct: 612 ETIAPAVN---EANRIYIGSINWNVTEEQIRGIFSQFGKIISCFLMQNTETGKHKGYGFI 668
Query: 296 EFYDVMSVPMAIALSGQPLLGQPVMV-KPSEAEKNLVQSNSSI 337
+F + S A+A++G LLG+ + V +P++ SN SI
Sbjct: 669 DFENKKSADDALAMNGFELLGRAMKVGRPTKGASANTISNGSI 711
>gi|255572397|ref|XP_002527136.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223533496|gb|EEF35238.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 642
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 30/199 (15%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
K+ K V P+V +T+F + + + DV +FF AG+V DVR +D++ +R KG
Sbjct: 371 KKPKTPVTPQVQ-STGSKTLFVGNLPFQVERADVEDFFKGAGEVVDVRFALDQD-QRFKG 428
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG- 350
G+VEF + + A+ L+GQ L G+ V + +L + A + PYSG
Sbjct: 429 FGHVEFATIEAAHEALKLNGQSLNGREVRL-------DLARERGERAPYT-----PYSGK 476
Query: 351 ------GAR----RLYVGNLHFNMTEDQLRQV----FEPFGTVELVQLPLD-ETGHCKGF 395
G R +++V + ED++R F+ G + + LP D ETG KG
Sbjct: 477 DNSFQKGGRSQTQKIFVRGFDKFLGEDEIRNSLGEHFKTCGEITRISLPTDYETGAIKGM 536
Query: 396 GFVQFARLEDARNALNLNG 414
+V+F AL NG
Sbjct: 537 AYVEFQDATGFNKALEFNG 555
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARN 408
S G++ L+VGNL F + + F+ G V V+ LD+ KGFG V+FA +E A
Sbjct: 383 STGSKTLFVGNLPFQVERADVEDFFKGAGEVVDVRFALDQDQRFKGFGHVEFATIEAAHE 442
Query: 409 ALNLNGQLEIVGRAIKV 425
AL LNGQ + GR +++
Sbjct: 443 ALKLNGQ-SLNGREVRL 458
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + F G V R+I +R + RS+G GYV+F + A+
Sbjct: 166 TIFVGRLSWSIDDEWLKNEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKEYAEKAVKE 225
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG-----ASGGGTGPYSGGARRLYVGNLHFN 363
+ G+ + G+ E N S S A A G P S + L++GNL FN
Sbjct: 226 MHGKEIDGR---------EINCDMSTSKPAAGNNDRAKKFGDVP-SEPSETLFLGNLSFN 275
Query: 364 MTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN 411
D + ++F FG + V++P ET KGFG+VQ+ +EDA+ AL+
Sbjct: 276 ADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKALD 324
>gi|45198625|ref|NP_985654.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|374108884|gb|AEY97790.1| FAFR107Wp [Ashbya gossypii FDAG1]
Length = 396
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 20/185 (10%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + F G V R+I +R + +S+G GYV+F DV A+
Sbjct: 168 TIFVGRLSWSVDDEWLKTEFDHIGGVVGARVIYERGTDKSRGYGYVDFEDVSYAEKAVKE 227
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAG------ASGGGTGPYSGGARRLYVGNLHF 362
+ G+ + G+ + N S S A A G P S + L++GNL F
Sbjct: 228 MHGKEIDGRAI---------NCDMSTSKPASAPREDRAKKYGDTP-SQPSDTLFLGNLSF 277
Query: 363 NMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVG 420
N D L ++F G V V++P E+ KGFG+VQ+ +E+A+ AL+ L G+ I
Sbjct: 278 NADRDALFELFSKHGNVISVRIPTHPESNQPKGFGYVQYGSVEEAQAALDALQGEY-IDN 336
Query: 421 RAIKV 425
R +++
Sbjct: 337 RPVRI 341
>gi|118486193|gb|ABK94939.1| unknown [Populus trichocarpa]
Length = 590
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
K K V P +T+F + + + DV FF AG+V DVR +D + R +G
Sbjct: 323 KTPKTPVTPVAHENTGSKTLFVGNLSFQVERADVENFFKGAGEVADVRFALDAD-ERFRG 381
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS-EAEKNLVQSNSSIAGASGGGTGPYSG 350
G+VEF + A+ L G LLG+ V + + E N S S + GG SG
Sbjct: 382 FGHVEFTTAEAAQKALKLHGNTLLGRDVRLDLAREKGSNTPYSKDSSSFPKGG-----SG 436
Query: 351 GARRLYVGNLHFNMTEDQLRQVF-EPFGT---VELVQLPLD-ETGHCKGFGFVQFARLED 405
++ ++V + ED++R E FG+ ++ V +P D +TG KG +++F +
Sbjct: 437 QSQTIFVRGFDKSAGEDEIRSSLQEHFGSCGEIKRVSIPTDYDTGAIKGMAYLEFNDADA 496
Query: 406 ARNALNLNG 414
A LNG
Sbjct: 497 LSKAFELNG 505
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G++ L+VGNL F + + F+ G V V+ LD +GFG V+F E A+ AL
Sbjct: 338 GSKTLFVGNLSFQVERADVENFFKGAGEVADVRFALDADERFRGFGHVEFTTAEAAQKAL 397
Query: 411 NLNGQLEIVGRAIKV 425
L+G ++GR +++
Sbjct: 398 KLHGNT-LLGRDVRL 411
>gi|145499158|ref|XP_001435565.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402698|emb|CAK68168.1| unnamed protein product [Paramecium tetraurelia]
Length = 601
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 11/175 (6%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS 310
VF + A E D+ EFF G + V L+ N SKG+ +V F + A+ S
Sbjct: 355 VFVRGLSFDATEDDIKEFFGECGNINSVNLLKGPNGY-SKGIAFVRFSTEDAQNSAVEYS 413
Query: 311 GQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLR 370
GQ +G+ + V+ ++ Q G T +VGNL F TED L
Sbjct: 414 GQDHMGRTITVEKTKPRDQRPQQGGQQGGQGESTT---------CFVGNLSFYATEDSLY 464
Query: 371 QVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
+FE G ++ V++ D G +GFG+V++ A+ L+ G ++ GRAI+V
Sbjct: 465 PIFEDCGKIKEVRIAKDAEGKSRGFGYVEYFDNASAQKGLSKTG-TDVEGRAIRV 518
>gi|345480698|ref|XP_001604333.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Nasonia
vitripennis]
Length = 455
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 134/315 (42%), Gaps = 40/315 (12%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVF-EPFGTVELVQLPLDETGHC-----KGFGFVQFARLED 405
ARRLYVGN+ F +TE+++ + F + L Q + C K F F++F +++
Sbjct: 143 ARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDE 202
Query: 406 ARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEG----GGLS--LNA-R 458
A+ +G + G+++K+ D + + N + + D GGL LN +
Sbjct: 203 TTQAMAFDG-INFKGQSLKIRRPHDYQPMPGMTDNPSMNVPDSPHKIFIGGLPNYLNEEQ 261
Query: 459 SRALLMQ-------KLDRSGSATTIAGSAVTPAVNSTALPLPTAPLLGAASAVSTLVPPL 511
+ LLM L + + G A V+ + A L G L+
Sbjct: 262 VKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLI--- 318
Query: 512 VQ-------GTVPTHPGQLGTALQVPTASVPIFDTIGVPSECLLLKNMFDPKNETYEEFD 564
VQ +P Q +QVP S + T G P+E L L NM P+ EE
Sbjct: 319 VQRASVGAKNPMPMIGAQAPVQIQVPGLS--MVGTSGPPTEVLCLLNMVTPEELMEEEEY 376
Query: 565 MDIKEDVEGECSKFGKLKHI-------FVEKDSAGFVYLRFENTQSAFAAQRALHGRWFA 617
DI ED++ EC+K+G ++ + V+ G V++ F + AQ+ L GR F
Sbjct: 377 EDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCGKVFVEFNSVLDCQKAQQTLTGRKFN 436
Query: 618 GKMITATFMVPQTYE 632
+++ ++ P Y
Sbjct: 437 NRVVVTSYFDPDKYH 451
>gi|324503285|gb|ADY41429.1| Splicing factor U2AF 65 kDa subunit [Ascaris suum]
Length = 522
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 136/341 (39%), Gaps = 43/341 (12%)
Query: 325 EAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVF-EPFGTVELVQ 383
+ +N VQS + G S + +RRLYVGN+ F +ED + F + L Q
Sbjct: 188 QIPRNNVQSAVPVVGPS------VTCQSRRLYVGNIPFGCSEDAMLDFFNQQMHLCGLAQ 241
Query: 384 LPLDETGHC-----KGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQ--- 435
P + C K F F++F +++ + +G + +G+ +K+ D +
Sbjct: 242 APGNPVLACQMNLDKNFAFIEFRSIDETTAGMAFDG-INFMGQQLKIRRPRDYQPMSTSY 300
Query: 436 DLGANTTGDFDDDEG-----GGLS--LNARSRALLMQKLDRSGSATTIA--------GSA 480
D+G + D GGL LNA L+ + + + G A
Sbjct: 301 DMGNMMVSNIVADSPYKIFIGGLPSYLNAEQVKELLSSFGQLKAFNLVTDVSTGVSKGYA 360
Query: 481 VTPAVNSTALPLPTAPLLGAASAVSTLVPPLVQGTVPTHPGQLGTAL--QVPTASVPIFD 538
++ + A L G LV VQ + + T Q+ A + +
Sbjct: 361 FAEYLDPSLTDQAIAGLNGMQLGDKNLV---VQLSCANARAAMSTTAFPQIQVAGIDLSH 417
Query: 539 TIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGF----- 593
G P+E L L NM + +E DI ED+ EC+K+G +K I V + G
Sbjct: 418 GAGPPTEVLCLMNMVTEEELKEDEEYEDILEDIREECAKYGFVKSIEVPRSIPGVDVTGV 477
Query: 594 --VYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYE 632
V++ F + Q AQ AL GR FA + + ++ P Y
Sbjct: 478 GKVFVEFNSKQECQKAQAALTGRKFANRTVVTSYYDPDLYH 518
>gi|333777884|dbj|BAK23967.1| nipped-B like a [Danio rerio]
Length = 2876
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 129/251 (51%), Gaps = 28/251 (11%)
Query: 16 PEPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRR 75
PE K K + + K RS SK + D K E +G K + SR H+ R
Sbjct: 590 PETPKNKHENRREISNKVSSEKRSDLSKHRHDGKAEKIRAEG------KGHETSRKHEGR 643
Query: 76 KERDSSC----HRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRD 131
E C HR D + R RS R E +RD+++E+ D+ ++GR+++
Sbjct: 644 TELSRDCKEERHREKDSDSSKGR-RSDTSKSSR-VEHNRDKEQEQEKVGDKGLEKGREKE 701
Query: 132 -RRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVI---ERERSRD 187
+ RD + +D+EKD+EK R+K G ER + E+E+ RD+E + +++RS+D
Sbjct: 702 LEKGRDKERVKDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSKD 761
Query: 188 REVIERERSRDREV-IERERSRDREL---------KEREKERESRDNDKESRRPKEKKEQ 237
E RE+ +D+E+ +RE+++D+EL KE EK RE +D DKE + +EK +
Sbjct: 762 LEKC-REKDQDKELEKDREKNQDKELEKGREKDQDKELEKGRE-KDRDKEMEKAREKDQD 819
Query: 238 VEPEVDPERDQ 248
E E E+DQ
Sbjct: 820 KELEKGREKDQ 830
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 122/211 (57%), Gaps = 18/211 (8%)
Query: 44 CKSDEKVEDYDDDGHRSRGSKSRDESR-NHDRRKERDSSCHRSWSRDGGRDRPRSSWEHR 102
CK +E+ + D D + R S + SR H+R KE++ + D G ++ R +
Sbjct: 650 CK-EERHREKDSDSSKGRRSDTSKSSRVEHNRDKEQE----QEKVGDKGLEKGREKELEK 704
Query: 103 DRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSE 162
RD ER +D+++++ GRD+ ++GR ++R +DR K++EK R+K G +
Sbjct: 705 GRDKERVKDQEKDQEKGRDKEVEKGRYKERV-------KDRVKEQEKVRDKEQVKGRDKK 757
Query: 163 RYRSDRDERERSRDREV-IERERSRDREVIE-RERSRDREVIERERSRDRELKEREKERE 220
R + RE+ +D+E+ +RE+++D+E+ + RE+ +D+E +E+ R +DR+ KE EK RE
Sbjct: 758 RSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKE-LEKGREKDRD-KEMEKARE 815
Query: 221 SRDNDKESRRPKEKKEQVEPEVDPERDQRTV 251
+D DKE + +EK + E E E+D+ V
Sbjct: 816 -KDQDKELEKGREKDQDKELEKGQEKDRDKV 845
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 135/249 (54%), Gaps = 30/249 (12%)
Query: 19 AKEKETANGDGNVKSEDRVRSRS-SKC------KSDEKVEDYDDDGHRSRG-SKSRDESR 70
KE+E VK D+ RS+ KC K EK + + D +G K +D+
Sbjct: 739 VKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKEL 798
Query: 71 NHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDR 130
R K+RD ++ +D ++ + + +D++ E+ +++DR++ R+++RD+ RD+
Sbjct: 799 EKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDK--VREKDRDKVRDK 856
Query: 131 DR-RERDHDTDRDREKDKEKEREKSHRSGSQSERYRS-DRDE-RERSRDREVIE-RERSR 186
DR + R+ D D+ REKD++K REK E+ R DRD+ RE+ RD+E ++ RE+ +
Sbjct: 857 DRDKVREKDRDKVREKDRDKLREKDR------EKIRERDRDKGREKDRDKEQVKTREKDQ 910
Query: 187 DREVIERERSRDREVI---------ERERSRDRELKEREKERESRDNDKESRRPKEKKEQ 237
++E + ++R ++RE + ++E+ R++EL E ++ E R R +E +
Sbjct: 911 EKERL-KDRDKEREKVRDKGRDRDRDQEKKRNKELTEDKQAPEQRSRPNSPRVKQEPRNG 969
Query: 238 VEPEVDPER 246
E ++ PER
Sbjct: 970 EESKIKPER 978
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 125/213 (58%), Gaps = 29/213 (13%)
Query: 48 EKVEDYDDDGHRSRGS---KSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSS--WEHR 102
E+V+D + D + R K R + R DR KE++ R + GRD+ RS + R
Sbjct: 709 ERVKDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKV--RDKEQVKGRDKKRSKDLEKCR 766
Query: 103 DRDTERDRDRDREERN------GRDRNRD----RGRDRDR-----RERDHDTDRDREKDK 147
++D +++ ++DRE+ GR++++D +GR++DR + R+ D D++ EK +
Sbjct: 767 EKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGR 826
Query: 148 EKEREKSHRSGSQSERYRSDRDERERSRDRE---VIERERSRDREVI-ERERSRDREVI- 202
EK+++K G + +R + +R++ RD++ V E++R + RE ++ R +DRE I
Sbjct: 827 EKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIR 886
Query: 203 ERERSRDRELKEREKER-ESRDNDKESRRPKEK 234
ER+R + RE K+R+KE+ ++R+ D+E R K++
Sbjct: 887 ERDRDKGRE-KDRDKEQVKTREKDQEKERLKDR 918
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 22/205 (10%)
Query: 45 KSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDR 104
K EK + D D +G + +D+ + ++ +E+D R RD RD+ R +DR
Sbjct: 808 KEMEKAREKDQDKELEKG-REKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDR 866
Query: 105 DTERDRDRD----REERNGRDRNRDRGRDRDR-----RERDHDTDRDREKDKEKEREKSH 155
D R++DRD ++ R+R+RD+GR++DR + R+ D +++R KD++KEREK
Sbjct: 867 DKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKERLKDRDKEREKVR 926
Query: 156 RSGSQSERYRSDRDERERSRDREVIE-RERSRDREVIERERSRDREVIERERSRDRELKE 214
G +R + + +E + D++ E R R V + R+ + I+ ERS +
Sbjct: 927 DKGRDRDRDQEKKRNKELTEDKQAPEQRSRPNSPRVKQEPRNGEESKIKPERSVHKN--- 983
Query: 215 REKERESRDNDKESRRPKEKKEQVE 239
N+K+ +R E K Q++
Sbjct: 984 --------SNNKDEKRGGENKNQLD 1000
>gi|125560429|gb|EAZ05877.1| hypothetical protein OsI_28114 [Oryza sativa Indica Group]
Length = 572
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNG 414
L++GNL FN+ +DQ+++ F+ G V V+L E G +GFG VQFA E+A+ AL L+G
Sbjct: 313 LFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFGHVQFASSEEAKKALELHG 372
Query: 415 QLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRS 470
++ GR +++ ++ N TG F G S+++ ++ D S
Sbjct: 373 -CDLDGRPVRLDLAHERGAYTPHSRNDTGSFQKQNRG------SSQSIFVKGFDSS 421
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIAL 309
T+F + ++ V EFF G+V VRL + S+G G+V+F A+ L
Sbjct: 312 TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGS-SRGFGHVQFASSEEAKKALEL 370
Query: 310 SGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYS----GGARRLYVGNLHFNMT 365
G L G+PV + +L + S TG + G ++ ++V ++
Sbjct: 371 HGCDLDGRPVRL-------DLAHERGAYTPHSRNDTGSFQKQNRGSSQSIFVKGFDSSLE 423
Query: 366 EDQLRQVFEPF----GTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNG 414
E ++R+ E G + V +P+D ETG KG ++ F AL L+G
Sbjct: 424 ESKIRESLEGHFADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSG 477
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 269 FSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMV 321
F+ G++ V + MDR + SKG+ Y++F D S A+ LSG L G + V
Sbjct: 435 FADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSGSDLGGYNLYV 487
>gi|115475163|ref|NP_001061178.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|75325377|sp|Q6Z1C0.1|NUCL1_ORYSJ RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1
gi|40253662|dbj|BAD05605.1| putative nucleolin [Oryza sativa Japonica Group]
gi|51449869|gb|AAU01907.1| putative nucleolin [Oryza sativa Indica Group]
gi|113623147|dbj|BAF23092.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|125602459|gb|EAZ41784.1| hypothetical protein OsJ_26324 [Oryza sativa Japonica Group]
Length = 572
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNG 414
L++GNL FN+ +DQ+++ F+ G V V+L E G +GFG VQFA E+A+ AL L+G
Sbjct: 313 LFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFGHVQFASSEEAKKALELHG 372
Query: 415 QLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLDRS 470
++ GR +++ ++ N TG F G S+++ ++ D S
Sbjct: 373 -CDLDGRPVRLDLAHERGAYTPHSRNDTGSFQKQNRG------SSQSIFVKGFDSS 421
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIAL 309
T+F + ++ V EFF G+V VRL + S+G G+V+F A+ L
Sbjct: 312 TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGS-SRGFGHVQFASSEEAKKALEL 370
Query: 310 SGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYS----GGARRLYVGNLHFNMT 365
G L G+PV + +L + S TG + G ++ ++V ++
Sbjct: 371 HGCDLDGRPVRL-------DLAHERGAYTPHSRNDTGSFQKQNRGSSQSIFVKGFDSSLE 423
Query: 366 EDQLRQVFEPF----GTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNG 414
E ++R+ E G + V +P+D ETG KG ++ F AL L+G
Sbjct: 424 ESKIRESLEGHFADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSG 477
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 269 FSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMV 321
F+ G++ V + MDR + SKG+ Y++F D S A+ LSG L G + V
Sbjct: 435 FADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSGSDLGGYNLYV 487
>gi|167533285|ref|XP_001748322.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773134|gb|EDQ86777.1| predicted protein [Monosiga brevicollis MX1]
Length = 423
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 217 KERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSR--AGK 274
K S D + +S+R K E + + ++F I E DV F + G
Sbjct: 199 KRGSSGDGENDSKRAKAATED-------DGEAVSMFIGGISWNVSEDDVVNFLNELGCGS 251
Query: 275 VRDVRLIMDRNSRRSKGVGYVEFYDV-----MSVPMAIALSGQPLLGQPVMVKPSEAEKN 329
V VR IM R+ +S+G GY + + V A+ L G+ L K +A+K
Sbjct: 252 VNSVR-IMYRDDGKSRGFGYADLSSAAREQFLQVTDAV-LDGRTL-------KFDKADKK 302
Query: 330 LVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-E 388
+ + GG G S + L+V NL F E+ V+E FG + V++ D E
Sbjct: 303 TPRP------SMGGAPGQLSAESSTLFVKNLSFRADENS---VWEIFGDAKSVRIVTDRE 353
Query: 389 TGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAI 423
TG+ KGFG+V+F ++ A+ ALN N + I GR +
Sbjct: 354 TGNSKGFGYVEFEDVDSAKTALNTNQGVSIAGREV 388
>gi|380420333|ref|NP_001154919.2| nipped-B-like protein B [Danio rerio]
gi|408407682|sp|F1QBY1.1|NIPLB_DANRE RecName: Full=Nipped-B-like protein B
Length = 2876
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 122/229 (53%), Gaps = 28/229 (12%)
Query: 38 RSRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSC----HRSWSRDGGRD 93
RS SK + D K E +G K + SR H+ R E C HR D +
Sbjct: 612 RSDLSKHRHDGKAEKIRAEG------KGHETSRKHEGRSELSRDCKEERHREKDSDSSKG 665
Query: 94 RPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRD-RRERDHDTDRDREKDKEKERE 152
R RS R E +RD+++E+ D+ ++GR+++ + RD + +D+EKD+EK R+
Sbjct: 666 R-RSDTSKSSR-VEHNRDKEQEQEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRD 723
Query: 153 KSHRSGSQSERYRSDRDERERSRDREVI---ERERSRDREVIERERSRDREV-IERERSR 208
K G ER + E+E+ RD+E + +++RS+D E RE+ +D+E+ +RE+++
Sbjct: 724 KEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKC-REKDQDKELEKDREKNQ 782
Query: 209 DREL---------KEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQ 248
D+EL KE EK RE +D DKE + +EK + E E E+DQ
Sbjct: 783 DKELEKGREKDQDKELEKGRE-KDRDKEMEKAREKDQDKELEKGREKDQ 830
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 132/235 (56%), Gaps = 18/235 (7%)
Query: 21 EKETANGDGNVKS-EDRVRSRSSKCKSDEKVEDYDDDGHRSRGSKSRDESR-NHDRRKER 78
EK A G G+ S + RS S+ +E+ + D D + R S + SR H+R KE+
Sbjct: 625 EKIRAEGKGHETSRKHEGRSELSRDCKEERHREKDSDSSKGRRSDTSKSSRVEHNRDKEQ 684
Query: 79 DSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHD 138
+ + D G ++ R + RD ER +D+++++ GRD+ ++GR ++R
Sbjct: 685 E----QEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRDKEVEKGRYKERV----- 735
Query: 139 TDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREV-IERERSRDREVIE-RERS 196
+DR K++EK R+K G +R + RE+ +D+E+ +RE+++D+E+ + RE+
Sbjct: 736 --KDRVKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKD 793
Query: 197 RDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTV 251
+D+E +E+ R +DR+ KE EK RE +D DKE + +EK + E E E+D+ V
Sbjct: 794 QDKE-LEKGREKDRD-KEMEKARE-KDQDKELEKGREKDQDKELEKGQEKDRDKV 845
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 135/249 (54%), Gaps = 30/249 (12%)
Query: 19 AKEKETANGDGNVKSEDRVRSRS-SKC------KSDEKVEDYDDDGHRSRG-SKSRDESR 70
KE+E VK D+ RS+ KC K EK + + D +G K +D+
Sbjct: 739 VKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKEL 798
Query: 71 NHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDR 130
R K+RD ++ +D ++ + + +D++ E+ +++DR++ R+++RD+ RD+
Sbjct: 799 EKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDK--VREKDRDKVRDK 856
Query: 131 DR-RERDHDTDRDREKDKEKEREKSHRSGSQSERYRS-DRDE-RERSRDREVIE-RERSR 186
DR + R+ D D+ REKD++K REK E+ R DRD+ RE+ RD+E ++ RE+ +
Sbjct: 857 DRDKVREKDRDKVREKDRDKLREKDR------EKIRERDRDKGREKDRDKEQVKTREKDQ 910
Query: 187 DREVIERERSRDREVI---------ERERSRDRELKEREKERESRDNDKESRRPKEKKEQ 237
++E + ++R ++RE + ++E+ R++EL E ++ E R R +E +
Sbjct: 911 EKERL-KDRDKEREKVRDKGRDRDRDQEKKRNKELTEDKQAPEQRSRPNSPRVKQEPRNG 969
Query: 238 VEPEVDPER 246
E ++ PER
Sbjct: 970 EESKIKPER 978
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 125/213 (58%), Gaps = 29/213 (13%)
Query: 48 EKVEDYDDDGHRSRGS---KSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSS--WEHR 102
E+V+D + D + R K R + R DR KE++ R + GRD+ RS + R
Sbjct: 709 ERVKDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKV--RDKEQVKGRDKKRSKDLEKCR 766
Query: 103 DRDTERDRDRDREERN------GRDRNRD----RGRDRDR-----RERDHDTDRDREKDK 147
++D +++ ++DRE+ GR++++D +GR++DR + R+ D D++ EK +
Sbjct: 767 EKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGR 826
Query: 148 EKEREKSHRSGSQSERYRSDRDERERSRDRE---VIERERSRDREVI-ERERSRDREVI- 202
EK+++K G + +R + +R++ RD++ V E++R + RE ++ R +DRE I
Sbjct: 827 EKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIR 886
Query: 203 ERERSRDRELKEREKER-ESRDNDKESRRPKEK 234
ER+R + RE K+R+KE+ ++R+ D+E R K++
Sbjct: 887 ERDRDKGRE-KDRDKEQVKTREKDQEKERLKDR 918
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 22/205 (10%)
Query: 45 KSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDR 104
K EK + D D +G + +D+ + ++ +E+D R RD RD+ R +DR
Sbjct: 808 KEMEKAREKDQDKELEKG-REKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDR 866
Query: 105 DTERDRDRD----REERNGRDRNRDRGRDRDR-----RERDHDTDRDREKDKEKEREKSH 155
D R++DRD ++ R+R+RD+GR++DR + R+ D +++R KD++KEREK
Sbjct: 867 DKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKERLKDRDKEREKVR 926
Query: 156 RSGSQSERYRSDRDERERSRDREVIE-RERSRDREVIERERSRDREVIERERSRDRELKE 214
G +R + + +E + D++ E R R V + R+ + I+ ERS +
Sbjct: 927 DKGRDRDRDQEKKRNKELTEDKQAPEQRSRPNSPRVKQEPRNGEESKIKPERSVHKN--- 983
Query: 215 REKERESRDNDKESRRPKEKKEQVE 239
N+K+ +R E K Q++
Sbjct: 984 --------SNNKDEKRGGENKNQLD 1000
>gi|293339650|gb|ADE44117.1| suppressor of ABI3-5 [Arabidopsis thaliana]
Length = 1007
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 166/417 (39%), Gaps = 90/417 (21%)
Query: 100 EHRDRDTERDR------DRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREK 153
+RD + ER D + N R +N RD D RE+D+D R R D E ER
Sbjct: 106 HYRDHEHERSSRYDGCDDYSCNDNNYRSKNYHHSRD-DGREKDYDYTR-RSYDSEYER-A 162
Query: 154 SHRSGSQSERYRSDRDERER-SRDREVIERERSRDREVIERERSRD-REVIERERSRDRE 211
S R GS+ R D +RER SRDRE R+R D+ RER + E+ RSR
Sbjct: 163 SVRDGSRKSR---DPQDRERNSRDREWDSRDREWDKRCYSRERDESPHKRYEKSRSRSTG 219
Query: 212 LKE----------------REKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQ 255
E RE E D+ ES R +E +++ + + TV
Sbjct: 220 RGEFSRSRSPRGRSHGRSYREDSYEG-DHWNESERRREYEDRHDQDHFSATPSATVVVKG 278
Query: 256 ICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF--YDVMSVPM------AI 307
+ +K+ E D+Y+ + G + VR+I ++NS S+G +++F D M I
Sbjct: 279 LSMKSTEEDLYQILAEWGPLHHVRVIREQNSGISRGFAFIDFPTVDAARTMMDRIEHDGI 338
Query: 308 ALSGQPLL---GQPV----------------------MVKPSEA---------------- 326
L G+ L+ QP M+ P++
Sbjct: 339 VLDGRKLMFHYSQPTGRAGVSRRQEHASRRSYGGSRNMIVPTDWICTICGCINFARRTSC 398
Query: 327 ----EKNLVQSNSSIAGASGGGTG---PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTV 379
E S S+ G S G +G L V L + E+ LR F +
Sbjct: 399 FQCNEPKTKDSPSADVGLSNSAAGKRISETGPTHVLVVRGLDEDADEEMLRYEFSKHAPI 458
Query: 380 ELVQLPLDETGHC-KGFGFVQFARLEDARNALN-LNGQ-LEIVGRAIKVSAVTDQSG 433
+ ++L D+ H +GF FV F +EDA AL NG LE G+ ++VS G
Sbjct: 459 KDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTALERNGKILRVSYAKSVHG 515
>gi|224083926|ref|XP_002307174.1| predicted protein [Populus trichocarpa]
gi|222856623|gb|EEE94170.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 232 KEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKG 291
K K V P +T+F + + + DV FF AG+V DVR +D + +R KG
Sbjct: 374 KTPKTPVTPVTSENAGSKTLFVGNLSFQVERADVENFFKEAGEVADVRFALDAD-QRFKG 432
Query: 292 VGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPS----EAEKNLVQSNSSIAGASGGGTGP 347
G+VEF + A+ +G+ LLG+ V + + E N S S + GG
Sbjct: 433 FGHVEFTTTEAALKALNFNGKSLLGRDVRLDLARERGERTSNTPYSKDSNSFQKGG---- 488
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVF-EPFGT---VELVQLPLD-ETGHCKGFGFVQFAR 402
G ++ ++V ED++R E FG+ + + +P D ETG KG +++F
Sbjct: 489 -RGQSQTIFVKGFDKFGAEDEIRSSLQEHFGSCGEISRISIPTDYETGAIKGMAYLEFND 547
Query: 403 LEDARNALNLNG 414
+ A LNG
Sbjct: 548 ADAMNKAFELNG 559
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARN 408
+ G++ L+VGNL F + + F+ G V V+ LD KGFG V+F E A
Sbjct: 387 NAGSKTLFVGNLSFQVERADVENFFKEAGEVADVRFALDADQRFKGFGHVEFTTTEAALK 446
Query: 409 ALNLNGQLEIVGRAIKV 425
ALN NG+ ++GR +++
Sbjct: 447 ALNFNGK-SLLGRDVRL 462
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNL 412
R+Y+GN+HFN+TE + F PFG ++ + L D TG +GF F+++ E A NA+
Sbjct: 604 RIYIGNIHFNLTEADIVAAFSPFGPIKSLSLSKDPATGRSRGFCFIEYTYPEAAINAIQN 663
Query: 413 NGQLEIVGRAIKV 425
Q I GR IKV
Sbjct: 664 MNQKTISGRQIKV 676
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 42/256 (16%)
Query: 248 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI 307
Q ++ I E D+ FS G ++ + L D + RS+G ++E+ + AI
Sbjct: 602 QSRIYIGNIHFNLTEADIVAAFSPFGPIKSLSLSKDPATGRSRGFCFIEYTYPEAAINAI 661
Query: 308 ------ALSGQPL-LGQPVM--VKPSEA---------------EKNLVQSNSSIAGASGG 343
+SG+ + + QP + + P+ + N++ SN+ ++ S
Sbjct: 662 QNMNQKTISGRQIKVRQPSIPVINPAATGVSVGMGGGGMSEILQPNIIPSNTFLSSTSVA 721
Query: 344 GTGPYSG-----------GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQL-PLDETGH 391
+ R+YVG++ +N TEDQ++ +F G V L P ETG
Sbjct: 722 SSFSSQALLNNTPVKERDNDNRVYVGSVPWNATEDQIKTIFSSIGNVVSCSLKPNLETGR 781
Query: 392 CKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGG 451
G+GF+ + + A +A++ +I GR +KV + + N G+ +D
Sbjct: 782 HMGYGFIDYDNPKSAEDAISTFNGYDINGRQLKVRKPVRNAPKVN---NNDGNLLEDN-- 836
Query: 452 GLSLNARSRALLMQKL 467
+SLN + LL QKL
Sbjct: 837 -ISLNNEQKILLTQKL 851
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 546 CLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGF-VYLRFENTQSA 604
C++++N+ P E D +E+++ ECS FG ++ + + + Y+ F + S
Sbjct: 862 CMVMRNLGSP-----AELDEYFEEEIKNECSSFGAVEKVVITNEGTSVKAYVLFRDAPSC 916
Query: 605 FAAQRALHGRWFAGKMITATF 625
+GR+F+G ++ A +
Sbjct: 917 AMCLSKQNGRYFSGYLVKAEY 937
>gi|940288|gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
[Pisum sativum]
Length = 611
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 213 KEREKERESRDNDKESRRPKEKKEQVEPEVDPERD-QRTVFAYQICLKADERDVYEFFSR 271
+++ K+ E D DK S KK P E +T+F + D+ FF
Sbjct: 323 QKKTKDVEMIDADKSS-----KKAPATPATPSENGGSKTLFVGNLSFSVQRSDIESFFQE 377
Query: 272 AGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV 331
G+V DVRL D + R KG G+VEF + A+ L+GQ LL + V + +L
Sbjct: 378 CGEVVDVRLASDEDGRF-KGFGHVEFATAEAAQSALELNGQELLQRGVRL-------DLA 429
Query: 332 QSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLR----QVFEPFGTVELVQLPLD 387
+ + S G G ++ ++V ++ ED++R Q F G V +P D
Sbjct: 430 RERGAFTPNSTGNQNSGRGQSQTVFVRGFDKSLGEDEIRAKLEQHFASCGQASRVSIPKD 489
Query: 388 -ETGHCKGFGFVQFARLEDARNALNLNG 414
+TG+ KGF ++ F + A+ L+G
Sbjct: 490 YDTGYSKGFAYMDFKDSDSFNKAIELHG 517
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARN 408
+GG++ L+VGNL F++ + F+ G V V+L DE G KGFG V+FA E A++
Sbjct: 351 NGGSKTLFVGNLSFSVQRSDIESFFQECGEVVDVRLASDEDGRFKGFGHVEFATAEAAQS 410
Query: 409 ALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
AL LNGQ E++ R +++ ++ N+TG+ + G +S+ + ++ D
Sbjct: 411 ALELNGQ-ELLQRGVRLDLARERGAFTP---NSTGNQNSGRG-------QSQTVFVRGFD 459
Query: 469 RS 470
+S
Sbjct: 460 KS 461
>gi|359472731|ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262769 [Vitis vinifera]
Length = 664
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 19/216 (8%)
Query: 218 ERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRD 277
E ++ D +S + K K P+V+ +T+F + + DV FF AG+V D
Sbjct: 373 ETPAKQTDSKSGK-KAPKTPATPQVE-STGSKTLFVGNLSFSVQKEDVEHFFKDAGEVVD 430
Query: 278 VRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSI 337
VR D + R KG G+VEF + A+ ++G+ LLG+ V + +L + +
Sbjct: 431 VRFSSDADGRF-KGFGHVEFATPEAAQKALKMNGKDLLGRAVRL-------DLARERGAY 482
Query: 338 AGASGGGTGPYSGG---ARRLYVGNLHFNMTEDQLRQVFEPF----GTVELVQLPLD-ET 389
SG + + G A+ ++V + EDQ+R E + G + + +P D E+
Sbjct: 483 TPYSGKESNSFQKGGSQAQTIFVRGFDKSGDEDQVRSTLEEYFGSCGDISRISIPKDYES 542
Query: 390 GHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
G KG ++ F + AL LNG E+ G + V
Sbjct: 543 GSVKGIAYMDFTDGDSFNKALELNG-TELGGYTLNV 577
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARN 408
S G++ L+VGNL F++ ++ + F+ G V V+ D G KGFG V+FA E A+
Sbjct: 398 STGSKTLFVGNLSFSVQKEDVEHFFKDAGEVVDVRFSSDADGRFKGFGHVEFATPEAAQK 457
Query: 409 ALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
AL +NG+ +++GRA+++ ++ + F +GG ++++ + ++ D
Sbjct: 458 ALKMNGK-DLLGRAVRLDLARERGAYTPYSGKESNSF--QKGG-----SQAQTIFVRGFD 509
Query: 469 RSG 471
+SG
Sbjct: 510 KSG 512
>gi|357144686|ref|XP_003573379.1| PREDICTED: uncharacterized protein LOC100836665 isoform 1
[Brachypodium distachyon]
Length = 606
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G++ L++GNL F+ Q+++ F G V V+L E GH KG+ V+FA EDA+ L
Sbjct: 339 GSKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRLATHEDGHPKGYAHVEFATAEDAKKGL 398
Query: 411 NLNGQLEIVGRAIKV 425
LNGQ E++GRA+++
Sbjct: 399 ELNGQ-ELMGRAVRL 412
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+F + A+ V EFF+ AG+V DVRL + KG +VEF +
Sbjct: 341 KTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRLATHEDG-HPKGYAHVEFATAEDAKKGLE 399
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT--GPYSGGARRLYVGNLHFNMTE 366
L+GQ L+G+ V + +L + GG+ P G + ++V + E
Sbjct: 400 LNGQELMGRAVRL-------DLALERGATPRPRDGGSFQKPSGGSSLSVFVKGFDSSQQE 452
Query: 367 DQLR----QVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNG 414
D++R Q F G + V +P+D E+G KG ++ F AL L+G
Sbjct: 453 DKIRSSLEQHFSKCGEITRVSVPMDYESGESKGIAYMDFTDESSFSKALELSG 505
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 267 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLG 316
+ FS+ G++ V + MD S SKG+ Y++F D S A+ LSG L G
Sbjct: 461 QHFSKCGEITRVSVPMDYESGESKGIAYMDFTDESSFSKALELSGSDLGG 510
>gi|403343651|gb|EJY71156.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 491
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 247 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMA 306
D++ +F + E + + F G V +V+L + R KG +VEF A
Sbjct: 238 DKKELFVGNLSFHTTEDSLGQAFGEYGTVTNVKL--PQQDGRPKGFAFVEFATHKEAQAA 295
Query: 307 I-ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIA-----GASGGGTGPYSGGARRLYVGNL 360
+ A +GQ G+ + + S + GA GG G + L+VGN+
Sbjct: 296 LDAYNGQDFEGRALRINFSGGKPAGAGGPGGNQGGFQRGAPSGGDGQST----TLFVGNI 351
Query: 361 HFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNG 414
F T+D L + F G ++ V++ + + G KGF V+F E A+ AL +NG
Sbjct: 352 SFQTTQDSLERHFSKCGPIKAVRVAMGDDGRVKGFAHVEFESPESAQKALEMNG 405
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 247 DQR---------TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 297
+R T+F ++ D+ + F G V R+I ++ S +S+G GYV+F
Sbjct: 280 SKRTKKQDEEPATLFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYVDF 339
Query: 298 YDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLY 356
A+ G+ + G+P+ + SE++ SN A G P S + L+
Sbjct: 340 ETKSQAQHALKEYQGREIDGRPINLDMSESKPR--PSNPRFDRAKQFGDVP-SAPSSTLF 396
Query: 357 VGNLHFNMTEDQLRQVFEPFGTVELVQLPL-DETGHCKGFGFVQFARLEDARNALN-LNG 414
+GNL FN D L +F +G V ++P +T KGFG+++F+ +++A+ AL LNG
Sbjct: 397 IGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFSTVDEAKAALEALNG 456
Query: 415 QLEIVGRAIKVSAVT 429
+ + GR ++ T
Sbjct: 457 EY-VEGRPCRLDFST 470
>gi|357144688|ref|XP_003573380.1| PREDICTED: uncharacterized protein LOC100836665 isoform 2
[Brachypodium distachyon]
Length = 557
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G++ L++GNL F+ Q+++ F G V V+L E GH KG+ V+FA EDA+ L
Sbjct: 290 GSKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRLATHEDGHPKGYAHVEFATAEDAKKGL 349
Query: 411 NLNGQLEIVGRAIKV 425
LNGQ E++GRA+++
Sbjct: 350 ELNGQ-ELMGRAVRL 363
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 231 PKEKKEQVEPEVDPERDQ------RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
P K Q E P +Q +T+F + A+ V EFF+ AG+V DVRL
Sbjct: 268 PTATKAQKEEPKTPASNQSQGTGSKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRLATHE 327
Query: 285 NSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG 344
+ KG +VEF + L+GQ L+G+ V + +L + GG
Sbjct: 328 DG-HPKGYAHVEFATAEDAKKGLELNGQELMGRAVRL-------DLALERGATPRPRDGG 379
Query: 345 T--GPYSGGARRLYVGNLHFNMTEDQLR----QVFEPFGTVELVQLPLD-ETGHCKGFGF 397
+ P G + ++V + ED++R Q F G + V +P+D E+G KG +
Sbjct: 380 SFQKPSGGSSLSVFVKGFDSSQQEDKIRSSLEQHFSKCGEITRVSVPMDYESGESKGIAY 439
Query: 398 VQFARLEDARNALNLNG 414
+ F AL L+G
Sbjct: 440 MDFTDESSFSKALELSG 456
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 267 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMV 321
+ FS+ G++ V + MD S SKG+ Y++F D S A+ LSG L G + V
Sbjct: 412 QHFSKCGEITRVSVPMDYESGESKGIAYMDFTDESSFSKALELSGSDLGGYNLYV 466
>gi|361126769|gb|EHK98755.1| putative Nuclear localization sequence-binding protein [Glarea
lozoyensis 74030]
Length = 525
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 7/185 (3%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+ +F + D+ +Y F G++ ++ DR S RSKG GYVEF + A+A
Sbjct: 267 KNLFVGNLSWNIDDEWLYREFEEFGEITRANVLTDRESGRSKGFGYVEFSSSAAAAAALA 326
Query: 309 LSGQPLL-GQPVMVKPSEAEKNLVQSNSSI--AGASGGGTGPYSGGARRLYVGNLHFNMT 365
L+ G+ V S N + A G P S L+VGNL F +
Sbjct: 327 AKKGALIDGREANVDFSTPRTNDAPGARADNRAKQFGDSQNPPS---DTLFVGNLSFEVD 383
Query: 366 EDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIK 424
+D + + F GTV V+LP D ++G+ KGFG+V F +++A+ A EI GR +
Sbjct: 384 QDAVGEAFGEHGTVVNVRLPTDMDSGNPKGFGYVTFESIDEAKTAYEAMKGQEIAGRPCR 443
Query: 425 VSAVT 429
+ T
Sbjct: 444 LDYAT 448
>gi|297737935|emb|CBI27136.3| unnamed protein product [Vitis vinifera]
Length = 691
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 19/216 (8%)
Query: 218 ERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRD 277
E ++ D +S + K K P+V+ +T+F + + DV FF AG+V D
Sbjct: 419 ETPAKQTDSKSGK-KAPKTPATPQVE-STGSKTLFVGNLSFSVQKEDVEHFFKDAGEVVD 476
Query: 278 VRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSI 337
VR D + R KG G+VEF + A+ ++G+ LLG+ V + +L + +
Sbjct: 477 VRFSSDADGRF-KGFGHVEFATPEAAQKALKMNGKDLLGRAVRL-------DLARERGAY 528
Query: 338 AGASGGGTGPYSGG---ARRLYVGNLHFNMTEDQLRQVFEPF----GTVELVQLPLD-ET 389
SG + + G A+ ++V + EDQ+R E + G + + +P D E+
Sbjct: 529 TPYSGKESNSFQKGGSQAQTIFVRGFDKSGDEDQVRSTLEEYFGSCGDISRISIPKDYES 588
Query: 390 GHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
G KG ++ F + AL LNG E+ G + V
Sbjct: 589 GSVKGIAYMDFTDGDSFNKALELNG-TELGGYTLNV 623
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARN 408
S G++ L+VGNL F++ ++ + F+ G V V+ D G KGFG V+FA E A+
Sbjct: 444 STGSKTLFVGNLSFSVQKEDVEHFFKDAGEVVDVRFSSDADGRFKGFGHVEFATPEAAQK 503
Query: 409 ALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRALLMQKLD 468
AL +NG+ +++GRA+++ ++ + F +GG ++++ + ++ D
Sbjct: 504 ALKMNGK-DLLGRAVRLDLARERGAYTPYSGKESNSF--QKGG-----SQAQTIFVRGFD 555
Query: 469 RSG 471
+SG
Sbjct: 556 KSG 558
>gi|85111281|ref|XP_963862.1| hypothetical protein NCU03092 [Neurospora crassa OR74A]
gi|28925605|gb|EAA34626.1| predicted protein [Neurospora crassa OR74A]
Length = 428
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
Query: 247 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMA 306
D+ T++ + D+ + F + R++ DR S RS+G GYV+F A
Sbjct: 178 DKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQKA 237
Query: 307 I-ALSGQPLLGQPVMVKPSEAEK-NLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNM 364
A SG L G+ + + + + N Q ++ A G T S + L+VGN+ F+
Sbjct: 238 YDAKSGALLEGREMRLDFAAKDAGNKPQDKAANRAAKHGDT--ISPESDTLFVGNMPFSA 295
Query: 365 TEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRA 422
E + F +V +++P D E+G KGF +V F +EDA+NA LNG ++ GR
Sbjct: 296 DESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNGS-DLNGRP 354
Query: 423 IKV 425
+++
Sbjct: 355 VRL 357
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 158 GSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREK 217
G++S R +DR E RSR ++ + + +++ D + R+ L K
Sbjct: 205 GAKSARVVTDR-ESGRSRGFGYVDFATNE-----QAQKAYDAKSGALLEGREMRLDFAAK 258
Query: 218 ERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRD 277
+ ++ DK + R + + + PE D T+F + ADE V +FF+ V
Sbjct: 259 DAGNKPQDKAANRAAKHGDTISPESD------TLFVGNMPFSADESVVSDFFNSVASVAS 312
Query: 278 VRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPV 319
+R+ D+ S R KG YV F V A L+G L G+PV
Sbjct: 313 LRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNGSDLNGRPV 355
>gi|350296577|gb|EGZ77554.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 356
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
KK + E D D+ T++ + D+ + F + R++ DR S RS+G G
Sbjct: 96 KKAKTEEVAD---DKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFG 152
Query: 294 YVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEK-NLVQSNSSIAGASGGGTGPYSGG 351
YV+F A A SG L G+ + + + + N Q ++ A G T S
Sbjct: 153 YVDFATNEQAQKAYDAKSGALLEGREMRLDFAAKDAGNKPQDKAANRAAKHGDT--ISPE 210
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
+ L+VGN+ F+ E + F +V +++P D E+G KGF +V F +EDA+NA
Sbjct: 211 SDTLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAF 270
Query: 411 -NLNGQLEIVGRAIKV 425
LNG ++ GR +++
Sbjct: 271 EQLNGS-DLNGRPVRL 285
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 59/152 (38%), Gaps = 37/152 (24%)
Query: 199 REVIERERSRDR-----ELKEREKERESRD-------------------------NDKES 228
R V +RE R R + E+ +++ D DK +
Sbjct: 138 RVVTDRESGRSRGFGYVDFATNEQAQKAYDAKSGALLEGREMRLDFAAKDAGNKPQDKAA 197
Query: 229 RRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRR 288
R + + + PE D T+F + ADE V +FF+ V +R+ D+ S R
Sbjct: 198 NRAAKHGDTISPESD------TLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGR 251
Query: 289 SKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPV 319
KG YV F V A L+G L G+PV
Sbjct: 252 PKGFAYVTFNSVEDAKNAFEQLNGSDLNGRPV 283
>gi|336464486|gb|EGO52726.1| hypothetical protein NEUTE1DRAFT_91358 [Neurospora tetrasperma FGSC
2508]
Length = 356
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
KK + E D D+ T++ + D+ + F + R++ DR S RS+G G
Sbjct: 96 KKAKTEEVAD---DKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFG 152
Query: 294 YVEFYDVMSVPMAI-ALSGQPLLGQPVMVKPSEAEK-NLVQSNSSIAGASGGGTGPYSGG 351
YV+F A A SG L G+ + + + + N Q ++ A G T S
Sbjct: 153 YVDFATNEQAQKAYDAKSGALLEGREMRLDFAAKDAGNKPQDKAANRAAKHGDT--ISPE 210
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
+ L+VGN+ F+ E + F +V +++P D E+G KGF +V F +EDA+NA
Sbjct: 211 SDTLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAF 270
Query: 411 -NLNGQLEIVGRAIKV 425
LNG ++ GR +++
Sbjct: 271 EQLNGS-DLNGRPVRL 285
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 59/152 (38%), Gaps = 37/152 (24%)
Query: 199 REVIERERSRDR-----ELKEREKERESRD-------------------------NDKES 228
R V +RE R R + E+ +++ D DK +
Sbjct: 138 RVVTDRESGRSRGFGYVDFATNEQAQKAYDAKSGALLEGREMRLDFAAKDAGNKPQDKAA 197
Query: 229 RRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRR 288
R + + + PE D T+F + ADE V +FF+ V +R+ D+ S R
Sbjct: 198 NRAAKHGDTISPESD------TLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGR 251
Query: 289 SKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPV 319
KG YV F V A L+G L G+PV
Sbjct: 252 PKGFAYVTFNSVEDAKNAFEQLNGSDLNGRPV 283
>gi|334185966|ref|NP_001190084.1| RNA-binding protein 5/10 [Arabidopsis thaliana]
gi|332645681|gb|AEE79202.1| RNA-binding protein 5/10 [Arabidopsis thaliana]
Length = 1008
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 164/418 (39%), Gaps = 91/418 (21%)
Query: 100 EHRDRDTERDR------DRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREK 153
+RD + ER D + N R +N RD D RE+D+D R R D E ER
Sbjct: 106 HYRDHEHERSSRYDGCDDYSCNDNNYRSKNYHHSRD-DGREKDYDYTR-RSYDSEYER-A 162
Query: 154 SHRSGSQSERYRSDRDERER-SRDREVIERERSRDREVIERERSRD-REVIERERSRDRE 211
S R GS+ R D +RER SRDRE R+R D+ RER + E+ RSR
Sbjct: 163 SVRDGSRKSR---DPQDRERNSRDREWDSRDREWDKRCYSRERDESPHKRYEKSRSRSTG 219
Query: 212 LKE----------------REKERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQ 255
E RE E D+ ES R +E +++ + TV
Sbjct: 220 RGEFSRSRSPRGRSHGRSYREDSYEG-DHWNESERRREYEDRHNQDHFSATPSATVVVKG 278
Query: 256 ICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF--YDVMSVPM------AI 307
+ +K+ E D+Y+ + G + VR+I ++NS S+G +++F D M I
Sbjct: 279 LSMKSTEEDLYQILAEWGPLHHVRVIREQNSGISRGFAFIDFPTVDAARTMMDRIEHDGI 338
Query: 308 ALSGQPLL----GQPV----------------------MVKPSEA--------------- 326
L G+ L+ QP M+ P++
Sbjct: 339 VLDGRKLMFHYSSQPTGRAGVSRRQEHASRRSYGGSRNMIVPTDWICTICGCINFARRTS 398
Query: 327 -----EKNLVQSNSSIAGASGGGTG---PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGT 378
E S S+ G S G +G L V L + E+ LR F
Sbjct: 399 CFQCNEPKTKDSPSADVGLSNSAAGKRISETGPTHVLVVRGLDEDADEEMLRYEFSKHAP 458
Query: 379 VELVQLPLDETGHC-KGFGFVQFARLEDARNALNLNGQ--LEIVGRAIKVSAVTDQSG 433
++ ++L D+ H +GF FV F +EDA AL + LE G+ ++V+ G
Sbjct: 459 IKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNRTALERNGKILRVAYAKSVHG 516
>gi|297834768|ref|XP_002885266.1| hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp.
lyrata]
gi|297331106|gb|EFH61525.1| hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp.
lyrata]
Length = 564
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 18/196 (9%)
Query: 235 KEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY 294
K+ P + + +T+FA + + D+ FF AG+V DVR + KG G+
Sbjct: 299 KQPKTPTTETQGGSKTLFAGNLSFQIKRSDIENFFKEAGEVVDVRF-SSYDDGTFKGYGH 357
Query: 295 VEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARR 354
VEF A+ L+G+ LLG+ V + + Q NS+ G G G+ +R
Sbjct: 358 VEFASPEEAQKALELNGKMLLGRDVRL---DLANERGQRNSN-PGRKGEGS-----QSRT 408
Query: 355 LYVGNLHFNMTED----QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNA 409
++V + ++ ED +LR +F G V V +P D ETG C+G ++ D A
Sbjct: 409 IFVRGFNSSLGEDEIKKELRSLFSNCGEVTRVHVPTDRETGACRGLAYIDLTSGFD--EA 466
Query: 410 LNLNGQLEIVGRAIKV 425
L L G EI G I V
Sbjct: 467 LQLRGS-EIGGWNIHV 481
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 234 KKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 293
KK + + + T+F + D+ +YE F V R++ D++S RS+G G
Sbjct: 273 KKNKASADGEASEKSATLFVGNLGWGVDDNALYEEFQNNEGVTGARVVTDKDSGRSRGFG 332
Query: 294 YVEFYDVMSVPMAIA-LSGQPLLGQPV----MVKPSEAEKNLVQSNSSIAGASGGGTGPY 348
YV+F + A +G L G+ + KPS A+ + A G P
Sbjct: 333 YVDFETPEAAEKAYNDKNGAFLQGREMRLDFAAKPS-ADSTPNARAAERARKHGDVISPE 391
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDAR 407
S L+VGNL F+ E+ + F V+ +++P D E+G KGF +V F+ ++DA+
Sbjct: 392 S---DTLFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVDDAK 448
Query: 408 NALN-LNGQLEIVGRAIKV 425
A LNG ++ GR +++
Sbjct: 449 AAFEALNGS-DLDGRPVRL 466
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 40/198 (20%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALS 310
+F + DE + F G++ VR++ +R++ RS+G GYVE+ + + A
Sbjct: 287 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF--- 343
Query: 311 GQPLLGQPVMVKPSEAEK---------NLVQSNSSIAGASGGGTGPYSGGAR-------- 353
EA+K NL + A G AR
Sbjct: 344 --------------EAKKGAEIDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQA 389
Query: 354 -----RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDAR 407
L+VGNL F+ ED + ++F G++ ++LP D ++G KGFG+VQ++ +++AR
Sbjct: 390 SPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEAR 449
Query: 408 NALNLNGQLEIVGRAIKV 425
A N +++GR +++
Sbjct: 450 AAFNELQGADLLGRPVRL 467
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
P G + L+VGNL +N+ E L+ FE FG + V++ + +TG +GFG+V++ D
Sbjct: 279 PAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVD 338
Query: 406 ARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRAL 462
A A EI GR I + T + +D G F D NAR+R+
Sbjct: 339 AAKAFEAKKGAEIDGRVINLDYATGRPANKD----QQGGFKD------RANARARSF 385
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 217 KERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
K+++ D+ + R + +Q PE D T+F + A+E V E F G +
Sbjct: 368 KDQQGGFKDRANARARSFGDQASPESD------TLFVGNLPFDANEDSVGELFGEKGSIL 421
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPV 319
+RL D +S R KG GYV++ V A L G LLG+PV
Sbjct: 422 GIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPV 465
>gi|310790913|gb|EFQ26446.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 474
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 38/229 (16%)
Query: 219 RESRDNDKESRRPKEKKEQVEPEVDPERDQRT--------VFAYQICLKADERDVYEFFS 270
+E+ + + ++ P +K++ ++ V P + RT +F + D+ +YE F
Sbjct: 189 KEASETEAKTEEPSKKRKALDDPVIPGKKARTDVSDKSSTLFVGSLAWAVDDNSLYEAFQ 248
Query: 271 RAGKVRDVRLIMD---------RNSRRSKGVGYVEFYDVMSVPMAIALS-GQPLLGQPVM 320
D + + RS+G GYV+F + A+ S G+ L G+ +
Sbjct: 249 E---------FADLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEGSQGRELAGRAMN 299
Query: 321 V-----KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEP 375
+ KP+ + N S A G P S L+VGNL F++ +D + F
Sbjct: 300 IDFSGQKPA-GDGNHQARASDRAQRHGDTVSPES---DTLFVGNLPFDVDQDTVNAFFST 355
Query: 376 FGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIVGRA 422
V V+LP D ETG+ KGFG+V F ++DA+ A LNGQ GR+
Sbjct: 356 AAEVTSVRLPTDPETGNLKGFGYVSFNSIDDAKTAFAQLNGQYVGEGRS 404
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
++VF + + + + FS G + V + D S + KG +++F D S A+
Sbjct: 512 KSVFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAVG 571
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSG-GARRLYVGNLHFNMTED 367
+G+ G+ + + S + + G G G + ++VGNL ++MT+D
Sbjct: 572 KNGEDCEGRDLRINYSFPKNDNAHGGKGKGGKGKGKGHHELGEKSASVFVGNLPWSMTQD 631
Query: 368 QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVS 426
L +VF G++ +P D ETG+ +GF ++ F + A NA L+G ++ GR I+V+
Sbjct: 632 WLYEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAENATKLSG-TDLEGRQIRVN 690
>gi|357473911|ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
gi|355508295|gb|AES89437.1| RNA-binding protein [Medicago truncatula]
Length = 623
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+F + D+ +FF G+V DVR D R KG G+VEF + A+
Sbjct: 364 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRF-KGFGHVEFASAEAAQSALE 422
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
++GQ LL + V + + +N+S A GG G ++ ++V N+ ED+
Sbjct: 423 MNGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGR----GQSQTVFVRGFDKNLGEDE 478
Query: 369 LR-QVFEPFGTV----ELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
+R ++ E FG V +P D E+G+ KGF ++ F + AL L+
Sbjct: 479 IRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELH 529
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G++ L+VGNL F++ + + F+ G V V+ DE G KGFG V+FA E A++AL
Sbjct: 362 GSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSAL 421
Query: 411 NLNGQLEIVGRAIKV 425
+NGQ E++ RA+++
Sbjct: 422 EMNGQ-ELLQRAVRL 435
>gi|171687819|ref|XP_001908850.1| hypothetical protein [Podospora anserina S mat+]
gi|170943871|emb|CAP69523.1| unnamed protein product [Podospora anserina S mat+]
Length = 459
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 6/186 (3%)
Query: 243 DPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMS 302
D E T++ + D+ +YE F + R++ D+ S RS+G GY++F +
Sbjct: 208 DSEEKSATLWCGNLGWGIDDNILYEEFKDFEGLTGARVVSDKESGRSRGFGYIDFDTHEN 267
Query: 303 VPMAI-ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLH 361
A A +G L G+ + + + Q ++ + G S + L+VGNL
Sbjct: 268 AEKAFNAKNGGDLQGREMRLDFAAKPAAAPQDRAAARASKHGDV--VSPPSDTLFVGNLP 325
Query: 362 FNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL-NLNGQLEIV 419
F+ ED + F V+ +++P D E+G KGF +V F ++DA+NA LNG +I
Sbjct: 326 FSADEDGVSAFFNEVAKVQSLRIPTDMESGRPKGFAYVSFYSIDDAKNAFEQLNGA-DID 384
Query: 420 GRAIKV 425
GR +++
Sbjct: 385 GRPVRL 390
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 242 VDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVM 301
V P D T+F + ADE V FF+ KV+ +R+ D S R KG YV FY +
Sbjct: 312 VSPPSD--TLFVGNLPFSADEDGVSAFFNEVAKVQSLRIPTDMESGRPKGFAYVSFYSID 369
Query: 302 SVPMAI-ALSGQPLLGQPV 319
A L+G + G+PV
Sbjct: 370 DAKNAFEQLNGADIDGRPV 388
>gi|357473909|ref|XP_003607239.1| RNA-binding protein [Medicago truncatula]
gi|355508294|gb|AES89436.1| RNA-binding protein [Medicago truncatula]
Length = 635
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+F + D+ +FF G+V DVR D R KG G+VEF + A+
Sbjct: 376 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRF-KGFGHVEFASAEAAQSALE 434
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
++GQ LL + V + + +N+S A GG G ++ ++V N+ ED+
Sbjct: 435 MNGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGR----GQSQTVFVRGFDKNLGEDE 490
Query: 369 LR-QVFEPFGTV----ELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
+R ++ E FG V +P D E+G+ KGF ++ F + AL L+
Sbjct: 491 IRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELH 541
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G++ L+VGNL F++ + + F+ G V V+ DE G KGFG V+FA E A++AL
Sbjct: 374 GSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSAL 433
Query: 411 NLNGQLEIVGRAIKV 425
+NGQ E++ RA+++
Sbjct: 434 EMNGQ-ELLQRAVRL 447
>gi|357473893|ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 643
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+F + D+ +FF G+V DVR D R KG G+VEF + A+
Sbjct: 384 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRF-KGFGHVEFASAEAAQSALE 442
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
++GQ LL + V + + +N+S A GG G ++ ++V N+ ED+
Sbjct: 443 MNGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGR----GQSQTVFVRGFDKNLGEDE 498
Query: 369 LR-QVFEPFGTV----ELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
+R ++ E FG V +P D E+G+ KGF ++ F + AL L+
Sbjct: 499 IRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELH 549
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G++ L+VGNL F++ + + F+ G V V+ DE G KGFG V+FA E A++AL
Sbjct: 382 GSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSAL 441
Query: 411 NLNGQLEIVGRAIKV 425
+NGQ E++ RA+++
Sbjct: 442 EMNGQ-ELLQRAVRL 455
>gi|50555934|ref|XP_505375.1| YALI0F13475p [Yarrowia lipolytica]
gi|49651245|emb|CAG78182.1| YALI0F13475p [Yarrowia lipolytica CLIB122]
Length = 422
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 5/179 (2%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+TVF + D+ + + F+ AG V R+I ++ + RSKG GYV+F +
Sbjct: 168 KTVFVGGLSWNVDDDWLTKEFADAGAV-SARVITEKATGRSKGFGYVDFASGADAQKCVE 226
Query: 309 -LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTED 367
+ + G+ V + S + + + G S A L+VGNL F+ D
Sbjct: 227 EFQDKEIDGRTVRLDISTNVRQTPEQKQRDRSSQYGDQ--LSEPADTLFVGNLSFDTNRD 284
Query: 368 QLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
L +F +G+V ++LP ET KGFG+VQF +++A+ AL E +GR+ ++
Sbjct: 285 DLFGIFGEYGSVVSIRLPTHPETEQPKGFGYVQFGSVDEAKAALEGLSGYEYLGRSFRL 343
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNL 412
+ ++VG L +N+ +D L + F G V + TG KGFG+V FA DA+ +
Sbjct: 168 KTVFVGGLSWNVDDDWLTKEFADAGAVSARVITEKATGRSKGFGYVDFASGADAQKCVEE 227
Query: 413 NGQLEIVGRAIKVSAVTD 430
EI GR +++ T+
Sbjct: 228 FQDKEIDGRTVRLDISTN 245
>gi|242048366|ref|XP_002461929.1| hypothetical protein SORBIDRAFT_02g010740 [Sorghum bicolor]
gi|241925306|gb|EER98450.1| hypothetical protein SORBIDRAFT_02g010740 [Sorghum bicolor]
Length = 943
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIAL 309
TV + LK ++ D+Y+ ++ G +R VR+I +RNS S+G +++F V + +
Sbjct: 238 TVVVKGLSLKTNDDDLYQILAQWGPLRSVRVIKERNSGMSRGFAFIDFPTVEAARRMMEA 297
Query: 310 SGQPLL---GQPVMV--KPSEAEKNLVQSNSSIAGASGGGT------GPYSGGARRLYVG 358
+G+ L G+ V + S + N ++ ++ + G T G G L V
Sbjct: 298 TGENGLEIDGRNVFFQYRTSCFQCNEPRTEDALPADATGSTPHFGRRGSELGPTHVLVVR 357
Query: 359 NLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHC-KGFGFVQFARLEDARNALN-LNG-Q 415
L N E+ LR F ++ ++L D+ H +GF FV F +EDA AL NG
Sbjct: 358 GLDENADEEMLRYEFAKHAPIKDIRLVRDKFTHVSRGFAFVHFHSVEDATKALEATNGTT 417
Query: 416 LEIVGRAIKVSAVTDQSGLQDLGANT 441
LE G+ ++V+ G G+ +
Sbjct: 418 LEKNGQVLRVAYAKSTHGPASGGSQS 443
>gi|410904251|ref|XP_003965605.1| PREDICTED: nipped-B-like protein B-like [Takifugu rubripes]
Length = 2756
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 109/200 (54%), Gaps = 24/200 (12%)
Query: 63 SKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDR 122
+K +D + DR+K+RD + R+ RD +DR S ++ RD +DRD D++ RDR
Sbjct: 678 NKKKDREMDRDRQKDRDETKDRNKDRDKNKDRDESRDGNKVRDKNKDRDVDKDGEESRDR 737
Query: 123 NRDRGRDRD-------RRERDHDTDRD--------REKDKEKEREKSHRSGSQSERYRSD 167
++D+ R+++ +ERD + DRD KDK K+R +S + ER ++
Sbjct: 738 HKDKDRNKETGVGANKNKERDKNKDRDVGPNRNKELSKDKNKDRGESKERNKEKERNKAK 797
Query: 168 RDERERSRDREVIERERSRDREVIERERSRDR-EVIERERSRDRELKEREKERESRDNDK 226
+ + RD + + R++DRE + RS DR +V +++RDRE + REK++E R +
Sbjct: 798 AKDEDGERD---VGKSRTKDRER-DAMRSEDRVQVRPVDKNRDRE-RNREKDKERRQHSS 852
Query: 227 E---SRRPKEKKEQVEPEVD 243
+ SR P E++ + E D
Sbjct: 853 QENCSRPPPEQQGKPESAAD 872
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 60/258 (23%)
Query: 11 KMVENPEPAKEK--ETANGDGNVKSEDRVRSRSSKC--KSDEKVEDYDDDGHRSRGSKSR 66
+ E P+ ++E+ E+ GDG K+E+ +C + +K + + D HR +
Sbjct: 547 RQAEAPKQSQERWRESKQGDG--KTENNRGHSDDRCLDSARQKHDKHSDSHHREDMNHEH 604
Query: 67 DESRNHDRRKERDSS-CHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRD 125
+S + +K S H D RDR ++D+D +R+ D + E+ GR +NR
Sbjct: 605 SQSSQPEAQKPTSKSEPHVKHGEDKSRDR------NKDKDKDREVDINMEDARGRCKNRQ 658
Query: 126 RGRDRDR-------------------------RERDHDTDRDREKDKEKEREKSHRSGSQ 160
+DRDR ++RD DR++++DK K+R++S R G++
Sbjct: 659 SNKDRDRENTKGEDRDKVRNKKKDREMDRDRQKDRDETKDRNKDRDKNKDRDES-RDGNK 717
Query: 161 SERYRSDRD---ERERSRDREVIERERSRDREV-------IERERSRDREV-------IE 203
DRD + E SRDR +++ R++E ER++++DR+V +
Sbjct: 718 VRDKNKDRDVDKDGEESRDR---HKDKDRNKETGVGANKNKERDKNKDRDVGPNRNKELS 774
Query: 204 RERSRDR-ELKEREKERE 220
+++++DR E KER KE+E
Sbjct: 775 KDKNKDRGESKERNKEKE 792
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 30/158 (18%)
Query: 32 KSEDRVRSR-SSKCKSDEKVEDYDDDGHRSRGSKSRDESRNH------------DRRKER 78
K++DR SR +K + K D D DG SR + +D+ RN D+ K+R
Sbjct: 705 KNKDRDESRDGNKVRDKNKDRDVDKDGEESR-DRHKDKDRNKETGVGANKNKERDKNKDR 763
Query: 79 DSSCHRS--WSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDR---- 132
D +R+ S+D +DR S + R+++ ER++ + ++E RD + R +DR+R
Sbjct: 764 DVGPNRNKELSKDKNKDRGES--KERNKEKERNKAKAKDEDGERDVGKSRTKDRERDAMR 821
Query: 133 -------RERDHDTDRDREKDKEKEREKSHRSGSQSER 163
R D + DR+R ++K+KER + H S R
Sbjct: 822 SEDRVQVRPVDKNRDRERNREKDKER-RQHSSQENCSR 858
>gi|115460618|ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|75327488|sp|Q7XTT4.2|NUCL2_ORYSJ RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa Japonica Group]
gi|113565480|dbj|BAF15823.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|215737156|dbj|BAG96085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 707
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G++ L+VGNL +N+ ++Q++Q F+ G V ++ E G+ +GFG V+FA E A+ AL
Sbjct: 447 GSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKAL 506
Query: 411 NLNGQLEIVGRAIKV 425
L G +++GR +++
Sbjct: 507 ELAGH-DLMGRPVRL 520
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 29/181 (16%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRL--IMDRNSRRSKGVGYVEFYDVMSVPMA 306
+T+F + ++ V +FF AG+V D+R D N R G G+VEF + A
Sbjct: 449 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFR---GFGHVEFATAEAAKKA 505
Query: 307 IALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTG--------PYSGGARRLYVG 358
+ L+G L+G+PV + +L + GA G+G P +++
Sbjct: 506 LELAGHDLMGRPVRL-------DLARER----GAYTPGSGRDNSSFKKPAQSSGNTIFIK 554
Query: 359 NLHFNMTEDQLRQVFEP-FGT---VELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
++ Q+R E FG+ + V +P D ETG KG ++ FA A LN
Sbjct: 555 GFDTSLDIHQIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELN 614
Query: 414 G 414
G
Sbjct: 615 G 615
>gi|357144691|ref|XP_003573381.1| PREDICTED: uncharacterized protein LOC100836665 isoform 3
[Brachypodium distachyon]
Length = 580
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G++ L++GNL F+ Q+++ F G V V+L E GH KG+ V+FA EDA+ +
Sbjct: 312 GSKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRLATHEDGHPKGYAHVEFATAEDAKKVI 371
Query: 411 -NLNGQLEIVGRAIKV 425
+LNGQ E++GRA+++
Sbjct: 372 VSLNGQ-ELMGRAVRL 386
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVM-SVPMAI 307
+T+F + A+ V EFF+ AG+V DVRL + KG +VEF + + +
Sbjct: 314 KTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRLATHEDG-HPKGYAHVEFATAEDAKKVIV 372
Query: 308 ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGT--GPYSGGARRLYVGNLHFNMT 365
+L+GQ L+G+ V + +L + GG+ P G + ++V +
Sbjct: 373 SLNGQELMGRAVRL-------DLALERGATPRPRDGGSFQKPSGGSSLSVFVKGFDSSQQ 425
Query: 366 EDQLR----QVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNG 414
ED++R Q F G + V +P+D E+G KG ++ F AL L+G
Sbjct: 426 EDKIRSSLEQHFSKCGEITRVSVPMDYESGESKGIAYMDFTDESSFSKALELSG 479
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 267 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLG 316
+ FS+ G++ V + MD S SKG+ Y++F D S A+ LSG L G
Sbjct: 435 QHFSKCGEITRVSVPMDYESGESKGIAYMDFTDESSFSKALELSGSDLGG 484
>gi|429848169|gb|ELA23683.1| nucleolin protein [Colletotrichum gloeosporioides Nara gc5]
Length = 511
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 219 RESRDNDKESRRPKEKKEQVEPEVDPERDQRT--------VFAYQICLKADERDVYEFFS 270
+E+ + + ++ P +K++ ++ V P + RT +F + D+ +YE F
Sbjct: 243 KEASETETKTEEPSKKRKALDDPVVPGKKARTDISDKSSTLFVGSLAWAVDDNTLYEAFQ 302
Query: 271 RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNL 330
+ R+ S+G D+ M I SGQ KP+ + N
Sbjct: 303 EFPDLTGARVAAAAALEASQG------KDLAGRAMNIDFSGQ---------KPA-GDGNH 346
Query: 331 VQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ET 389
A G P S L+VGNL F+ +D + F V V+LP D ++
Sbjct: 347 QARAQDRAQKHGDTVSPES---ETLFVGNLPFDTDQDTVHAFFSEVAEVASVRLPTDPDS 403
Query: 390 GHCKGFGFVQFARLEDARNALN-LNGQLEIVGRA 422
G+ KGFG+V F +EDA++A + LNGQ GR+
Sbjct: 404 GNLKGFGYVSFNSIEDAKSAFSQLNGQYLGEGRS 437
>gi|242080817|ref|XP_002445177.1| hypothetical protein SORBIDRAFT_07g005510 [Sorghum bicolor]
gi|241941527|gb|EES14672.1| hypothetical protein SORBIDRAFT_07g005510 [Sorghum bicolor]
Length = 647
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+F + +A+ DV EFF+ AG+V DVR + R KG YVEF + A
Sbjct: 380 KTLFMANVPWRAEFEDVKEFFADAGEVVDVRFPTHEDGHR-KGFCYVEFVSAEAAEKAFK 438
Query: 309 -LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTED 367
L G+ V + ++ +N + + +G G P G + ++V ++ED
Sbjct: 439 EKQSTELQGREVRLDFAKGGRN---TQTPRSGNDGSFQKPARGTSNSIFVRGFDKELSED 495
Query: 368 QLRQV----FEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNG 414
++R F+ G + V +P D E+G KG ++ F + A+ L+G
Sbjct: 496 EIRSALQEHFKKCGDITRVSIPTDYESGAIKGMAYMDFKDQDSVSKAIELSG 547
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNL 412
+ L++ N+ + + +++ F G V V+ P E GH KGF +V+F E A A
Sbjct: 380 KTLFMANVPWRAEFEDVKEFFADAGEVVDVRFPTHEDGHRKGFCYVEFVSAEAAEKAFKE 439
Query: 413 NGQLEIVGRAIKV 425
E+ GR +++
Sbjct: 440 KQSTELQGREVRL 452
>gi|116180414|ref|XP_001220056.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
gi|88185132|gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
Length = 475
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 4/179 (2%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-A 308
T++ + D+ +YE F + R++ D+ + RS+G GYV+F + A
Sbjct: 222 TLWVGNLGWGVDDNALYEEFQSIEGIVSARVVSDKETGRSRGFGYVDFDSAEAAQKAYDE 281
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
SG L G+ + + + N+ A + S + L+VGNL F+ E
Sbjct: 282 KSGAFLQGRDLRLDFASKPSADSAPNARAADRAKKHGDVISPPSDTLFVGNLPFSADESS 341
Query: 369 LRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN-LNGQLEIVGRAIKV 425
+ F V+ +++P D E+G KGF +V F+ ++DA+ LNG ++ GR +++
Sbjct: 342 VSNYFNEVAQVQSLRIPTDQESGRPKGFAYVTFSSIDDAKKVFEALNGG-DLDGRPVRL 399
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 50/202 (24%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIAL 309
T++ + D+ +YE F G V R++ D++S RS+G GYV+F +
Sbjct: 297 TLWVGNLGWGVDDNALYEEFQHVGGVVGARVVTDKDSGRSRGFGYVDFEN---------- 346
Query: 310 SGQPLLGQPVMVKPSEAEKNLVQSNSS----------IAGASGGGTGPYSGGARR----- 354
P AEK + N + A P + A R
Sbjct: 347 -------------PDAAEKAYNEKNGAFLQGREMRLDFASKPNADAPPSARAAERARKHG 393
Query: 355 ---------LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLE 404
L+VGNL F+ ED + + F V+ +++P D E+G KGF +V F+ +E
Sbjct: 394 DVISPESDTLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVE 453
Query: 405 DARNAL-NLNGQLEIVGRAIKV 425
DA+ A LNG ++ GR +++
Sbjct: 454 DAKKAFETLNGS-DLDGRPVRL 474
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 229 RRPKEKKEQVEPEVDPER------DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIM 282
R+ +E KE+V V + + T+F ++ D+ + F G V R+IM
Sbjct: 170 RKAEESKEEVSTPVKKSKPAAVNEEPATLFVGRLSWNIDDSWLKREFEHIGGVISARVIM 229
Query: 283 DRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGAS 341
+R + +S+G GYV+F + A+ + G+ + G+P+ + S + + +S + A
Sbjct: 230 ERATGKSRGYGYVDFETKSAAEKALEEMQGKEIDGRPINLDMSTGKPHASRSTNDRAKQY 289
Query: 342 GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
G S L+VGNL FN D L VF +G V ++P +T KGFG+VQF
Sbjct: 290 GDSQSALS---DTLFVGNLSFNANRDNLFTVFGEYGNVISCRVPTHPDTQQPKGFGYVQF 346
Query: 401 ARL---------------------------EDARN 408
+ + D N
Sbjct: 347 SSVDEAKAALEALNGEYIEGRPCRLDFSTPRDNSN 381
>gi|256072869|ref|XP_002572756.1| fuse-binding protein-interacting repressor siahbp1 [Schistosoma
mansoni]
Length = 520
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 29/188 (15%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI--- 307
V+ I E + + FS G ++ V L D ++++ KG ++EF + +AI
Sbjct: 97 VYVGSIAYDVKEDSLKQVFSPFGPIKSVNLSWDPSTQKHKGFAFLEFEYPEAAQLAIDQM 156
Query: 308 ---ALSGQPL-LGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFN 363
+ G+ L +G+P + +E N + + ++ R+YV +H +
Sbjct: 157 NGTSFGGRQLKVGRPSNLTNAEPVINELVNEHNLH--------------NRIYVAGIHLD 202
Query: 364 MTEDQLRQVFEPFGTVELVQLPLDETGHC--KGFGFVQFARLEDA------RNALNLNGQ 415
+TED + VFE FG + +L D T +GFG++++ + A N NL GQ
Sbjct: 203 LTEDDVSLVFEAFGKIVFCKLQPDPTRPMRHRGFGYIEYESTQSAADAVGSMNQFNLGGQ 262
Query: 416 LEIVGRAI 423
L V +AI
Sbjct: 263 LLRVCKAI 270
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN 411
R+YVG++ +++ ED L+QVF PFG ++ V L D T KGF F++F E A+ A++
Sbjct: 95 NRVYVGSIAYDVKEDSLKQVFSPFGPIKSVNLSWDPSTQKHKGFAFLEFEYPEAAQLAID 154
Query: 412 LNGQLEIVGRAIKV 425
GR +KV
Sbjct: 155 QMNGTSFGGRQLKV 168
>gi|21700195|dbj|BAC02896.1| tobacco nucleolin [Nicotiana tabacum]
Length = 620
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
G++ L+VGNL +++ + + F+ G V+ V+ E G KG+G V+F E A AL
Sbjct: 365 GSKTLFVGNLSYSVEQADVENFFKDAGEVQEVRFSTHEDGSFKGYGHVEFVTAEAAHKAL 424
Query: 411 NLNGQLEIVGRAIKV 425
LNGQ +++GRA+++
Sbjct: 425 ELNGQ-DLLGRAVRL 438
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 45/208 (21%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+F + ++ DV FF AG+V++VR + KG G+VEF + A+
Sbjct: 367 KTLFVGNLSYSVEQADVENFFKDAGEVQEVRFSTHEDGSF-KGYGHVEFVTAEAAHKALE 425
Query: 309 LSGQPLLGQPVMV---------KPSEA-EKNLVQSNSSIAGASGGGTGPYSGGARRLYVG 358
L+GQ LLG+ V + P E+N Q G S G T ++V
Sbjct: 426 LNGQDLLGRAVRLDLARERGEYTPRTGREENSFQRQ----GRSEGTT---------IFVR 472
Query: 359 NLHFNMTEDQLRQV----FEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNG 414
N EDQ+R F G + ++P D G+ KG +++FA NG
Sbjct: 473 GFDKNEAEDQIRSSLEEHFASCGKIFKTRIPTDPEGYIKGMAYIEFA-----------NG 521
Query: 415 QLEIVGRAIKVSAVTDQSGLQDLGANTT 442
+ + +A+++ G + G N T
Sbjct: 522 DSDALNKALELD------GSEVGGYNLT 543
>gi|168041522|ref|XP_001773240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675435|gb|EDQ61930.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 27/203 (13%)
Query: 240 PEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
P +T+F + K + +YEFF+ AG V DVR+ D + RS+G G+VEF
Sbjct: 311 PTTSSTGGSKTIFVKNLAWKVTQDTLYEFFADAGTVADVRISQDDDG-RSRGFGHVEFET 369
Query: 300 VMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGG-----------TGPY 348
A+ SGQ + G+ + +L + A GGG G
Sbjct: 370 PEGAQNALLKSGQNVEGREIWC-------DLARERG--AATPGGGKDWSQTPNGGTRGGR 420
Query: 349 SGGARRLYVGNLHFNMTEDQLR----QVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
SGG + YV E+ +R ++F GTV V++P D E+G KGF +V+F
Sbjct: 421 SGGGQTAYVRGFDKFQDEETIRSGLTKLFSDCGTVLNVRIPTDRESGQIKGFAYVEFGSK 480
Query: 404 EDARNALNLNGQLEIVGRAIKVS 426
++ A L+G + GR++ V+
Sbjct: 481 DEVNKAFELDGS-DFNGRSLVVN 502
>gi|1279563|emb|CAA61298.1| nuM1 [Medicago sativa]
Length = 635
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELV--QLPLDETGHCKGFGFVQFARLEDA 406
+ G++ L+VGNL F++ + F+ G VE+V +L D G KGFG V+FA E A
Sbjct: 372 TSGSKTLFVGNLSFDVKRSDIENFFQ--GCVEVVDVRLASDGDGVFKGFGHVEFATAEAA 429
Query: 407 RNALNLNGQLEIVGRAIKV 425
++AL +NGQ E++ RA+++
Sbjct: 430 QSALEMNGQ-ELLHRALRL 447
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+F + D+ FF +V DVRL D + KG G+VEF + A+
Sbjct: 376 KTLFVGNLSFDVKRSDIENFFQGCVEVVDVRLASDGDGVF-KGFGHVEFATAEAAQSALE 434
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
++GQ LL + + + + +N+S A GG G ++ ++V N+ ED+
Sbjct: 435 MNGQELLHRALRLDLARERGAFTPNNNSNYSAQSGGR----GQSQTVFVRGFDKNLGEDE 490
Query: 369 LR-QVFEPFGTV----ELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
+R ++ E FG V +P D E+G+ KGF ++ F + AL L+
Sbjct: 491 IRAKLMEHFGGTCGEPTRVSIPKDYESGYSKGFAYMDFKDSDSFSKALELH 541
>gi|326431448|gb|EGD77018.1| hypothetical protein PTSG_07360 [Salpingoeca sp. ATCC 50818]
Length = 511
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 250 TVFAYQICLKADERDVYEFFS--RAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI 307
++F I E D+ F S G V VRLIM RS+G+ Y + D +V I
Sbjct: 264 SLFVGNISFDVSEEDLKAFLSELNLGTVHAVRLIM--RDGRSRGIAYAD-VDASAVDNFI 320
Query: 308 ALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARR--------LYVGN 359
+ L+G+ + ++ + GG+ P +R L+V N
Sbjct: 321 NTTDAELMGRALRFDNAD---------------NKGGSRPRQSFQQRQPNEPSSTLFVKN 365
Query: 360 LHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEI 418
L F+ E+ L +E F V++ D ETG +GFG+V F + A+ AL+ N I
Sbjct: 366 LSFDADENAL---WETFTNASRVRIATDRETGRSRGFGYVDFEDADTAKTALDANQGANI 422
Query: 419 VGRAI 423
GR +
Sbjct: 423 YGREV 427
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
P G + L+VGNL +N+ E L+ FE FG + V++ + +TG +GFG+V++ D
Sbjct: 289 PAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVD 348
Query: 406 ARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRAL 462
A A EI GR I + T + +D G F D NAR+R+
Sbjct: 349 AAKAFEAKKGAEIDGRVINLDYATGRPANKD----QQGGFKD------RANARARSF 395
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 217 KERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
K+++ D+ + R + +Q PE D T+F + A+E V E F G +
Sbjct: 378 KDQQGGFKDRANARARSFGDQASPESD------TLFVGNLPFDANEDSVGELFGEKGSIL 431
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPV 319
+RL D +S R KG GYV++ V A L G LLG+PV
Sbjct: 432 GIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPV 475
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
P G + L+VGNL +N+ E L+ FE FG + V++ + +TG +GFG+V++ D
Sbjct: 281 PAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVD 340
Query: 406 ARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRAL 462
A A EI GR I + T + +D G F D NAR+R+
Sbjct: 341 AAKAFEAKKGAEIDGRVINLDYATGRPANKD----QQGGFKD------RANARARSF 387
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 217 KERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
K+++ D+ + R + +Q PE D T+F + A+E V E F G +
Sbjct: 370 KDQQGGFKDRANARARSFGDQASPESD------TLFVGNLPFDANEDSVGELFGEKGSIL 423
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPV 319
+RL D +S R KG GYV++ V A L G LLG+PV
Sbjct: 424 GIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPV 467
>gi|297840477|ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
gi|297333961|gb|EFH64379.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 31/206 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ +++ K +VE
Sbjct: 252 RHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 311
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIAGASGGGT 345
V A+AL G L G PV V+ PS+ NL N + G S G T
Sbjct: 312 VEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNL---NLAAVGLSSGST 368
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF--AR 402
G G R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 369 GGLEG-PDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPS 427
Query: 403 LED----ARNALNLNGQLEIVGRAIK 424
+ D A N + + + V RAI+
Sbjct: 428 VTDIACAALNGIKMGDKTLTVRRAIQ 453
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 541 GVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS--------AG 592
G P++ + L + + +E DI ED+ E KFG L ++ + + + G
Sbjct: 484 GTPTKIVCLTQVVTADDLRDDEEYADIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVG 543
Query: 593 FVYLRFENTQSAFAAQRALHGRWFAGKMITATF 625
V+L + + + A+ ++GR F G + A +
Sbjct: 544 KVFLEYADVDGSSKARSGMNGRKFGGNQVVAVY 576
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 347 PYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLED 405
P G + L+VGNL +N+ E L+ FE FG + V++ + +TG +GFG+V++ D
Sbjct: 282 PAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVD 341
Query: 406 ARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGANTTGDFDDDEGGGLSLNARSRAL 462
A A EI GR I + T + +D G F D NAR+R+
Sbjct: 342 AAKAFEAKKGAEIDGRVINLDYATGRPANKD----QQGGFKD------RANARARSF 388
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 217 KERESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVR 276
K+++ D+ + R + +Q PE D T+F + A+E V E F G +
Sbjct: 371 KDQQGGFKDRANARARSFGDQASPESD------TLFVGNLPFDANEDSVGELFGEKGSIL 424
Query: 277 DVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA-LSGQPLLGQPV 319
+RL D +S R KG GYV++ V A L G LLG+PV
Sbjct: 425 GIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPV 468
>gi|357438349|ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355478498|gb|AES59701.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 611
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 28/173 (16%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPM 305
R R V+ + A+E+ V FFS+ +M + G G V
Sbjct: 287 RHARRVYVGGLSPTANEQSVATFFSQ---------VMATIGGNTAGPGDAVMRSVEEASN 337
Query: 306 AIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIAGASGGGTGPYSGG 351
A+AL G G PV V+ PS+ NL N + G S G G G
Sbjct: 338 AMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGLVGLSPGSAGGLDG- 393
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
R++VG + + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 394 PDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDL 446
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 542 VPSECLLLKNMFDPK----NETYEEFDMDIKEDVEGECSKFGKLKHIFVEK--------D 589
V ++ L L + P +E YEE I +D+ ECSKFG L ++ + +
Sbjct: 507 VATKVLCLTHAVSPDELKDDEDYEE----ILDDMRQECSKFGNLVNVVIPRPRPDGELCP 562
Query: 590 SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATF 625
G V+L + + + A+ L+GR F G + A F
Sbjct: 563 GVGKVFLEYADVDGSTKARSGLNGRKFGGNQVIAVF 598
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 12/94 (12%)
Query: 133 RERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDRE--- 189
R+ D ++ R REK++E REK + +R RS +RE+SRDRE ERSRDRE
Sbjct: 51 RDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRE---SERSRDRESER 107
Query: 190 ----VIERERSRDREVIERERSRDRELKEREKER 219
V +RERSRDR + E+S+DRE ++R+ E+
Sbjct: 108 SRDRVRDRERSRDRGR-DSEKSKDRE-RDRDGEK 139
>gi|357455533|ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 626
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 25/179 (13%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ +++ K +VE
Sbjct: 287 RHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVEMRS 346
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIAGASGGGT 345
V A+AL G G PV V+ PS+ NL N + G S G
Sbjct: 347 VEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGLVGLSPGSA 403
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
G G R++VG + + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 404 GGLDG-PDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDL 461
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 126/336 (37%), Gaps = 73/336 (21%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVF-EPFGTV---------ELVQLPLDETGHCKGFGFVQFA 401
ARR+YVG L E + F + T+ +V + ++ H K F FV+
Sbjct: 289 ARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYIN---HDKKFAFVEMR 345
Query: 402 RLEDARNALNLNGQLEIVGRAIKVSAVTDQS------------------GLQDLGANTTG 443
+E+A NA+ L+G + G +KV TD + GL L + G
Sbjct: 346 SVEEASNAMALDGII-FEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSPGSAG 404
Query: 444 DFDDDE---GGGLSL---NARSRALL----------MQKLDRSGSATTIAGSAVTPAVNS 487
D + GG+ + R LL + K +G++ G A +
Sbjct: 405 GLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSK---GYAFCVYQDL 461
Query: 488 TALPLPTAPLLGAASAVSTL-VPPLVQGTVPTHP-----GQLGTALQVPTASVPIFDTIG 541
+ A L G TL V Q T P P L A Q +
Sbjct: 462 AVTDIACAALNGIKMGDKTLTVRRANQNTNPMQPKPEQESILMHAQQQIALQKLMLQPAL 521
Query: 542 VPSECLLLKNMFDPK----NETYEEFDMDIKEDVEGECSKFGKLKHIFVEK--------D 589
V ++ L L + P +E YEE I +D+ ECSKFG L ++ + +
Sbjct: 522 VATKVLCLTHAVSPDELKDDEDYEE----ILDDMRQECSKFGNLVNVVIPRPRPDGELCP 577
Query: 590 SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATF 625
G V+L + + + A+ L+GR F G + A F
Sbjct: 578 GVGKVFLEYADVDGSTKARSGLNGRKFGGNQVIAVF 613
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 12/94 (12%)
Query: 133 RERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDRE--- 189
R+ D ++ R REK++E REK + +R RS +RE+SRDRE ERSRDRE
Sbjct: 51 RDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRE---SERSRDRESER 107
Query: 190 ----VIERERSRDREVIERERSRDRELKEREKER 219
V +RERSRDR + E+S+DRE ++R+ E+
Sbjct: 108 SRDRVRDRERSRDRGR-DSEKSKDRE-RDRDGEK 139
>gi|357455535|ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487096|gb|AES68299.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 629
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 25/179 (13%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ +++ K +VE
Sbjct: 287 RHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVEMRS 346
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIAGASGGGT 345
V A+AL G G PV V+ PS+ NL N + G S G
Sbjct: 347 VEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGLVGLSPGSA 403
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
G G R++VG + + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 404 GGLDG-PDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDL 461
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 12/94 (12%)
Query: 133 RERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDRE--- 189
R+ D ++ R REK++E REK + +R RS +RE+SRDRE ERSRDRE
Sbjct: 51 RDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRE---SERSRDRESER 107
Query: 190 ----VIERERSRDREVIERERSRDRELKEREKER 219
V +RERSRDR + E+S+DRE ++R+ E+
Sbjct: 108 SRDRVRDRERSRDRGR-DSEKSKDRE-RDRDGEK 139
>gi|357455537|ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487097|gb|AES68300.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 627
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 25/179 (13%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ +++ K +VE
Sbjct: 285 RHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVEMRS 344
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIAGASGGGT 345
V A+AL G G PV V+ PS+ NL N + G S G
Sbjct: 345 VEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGLVGLSPGSA 401
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
G G R++VG + + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 402 GGLDG-PDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDL 459
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 61/96 (63%), Gaps = 9/96 (9%)
Query: 133 RERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIE 192
R+ D ++ R REK++E REK + +R RS +RE+SRDR E ERSRDR E
Sbjct: 51 RDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDR---ESERSRDR---E 104
Query: 193 RERSRDREVIERERSRDREL-KEREKERESRDNDKE 227
ERSRDR V +RERSRDR E+ K+RE RD D E
Sbjct: 105 SERSRDR-VRDRERSRDRGRDSEKSKDRE-RDRDGE 138
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 63 SKSRDESRNHDRRKERDSSCHRSWSRDGGRDR------------PRSSWEHRDRDTERDR 110
SK+ SR++DR +SS R R+ GR++ R + RD E +R
Sbjct: 44 SKTNLGSRDNDR----ESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESER 99
Query: 111 DRDREERNGRDRNRDRGRDRDR-RERDHDTDRDREKDKEK 149
RDRE RDR RDR R RDR R+ + DR+R++D EK
Sbjct: 100 SRDRESERSRDRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|330801236|ref|XP_003288635.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
gi|325081308|gb|EGC34828.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
Length = 1853
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 85/163 (52%), Gaps = 29/163 (17%)
Query: 87 SRDGGRDRPR---SSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRR-ERDHDTDRD 142
SRD RD+ S EHR + E DR +E R+ RD+ RD++ R +RD + +
Sbjct: 1373 SRDHHRDKDHHRESHREHRSSEREHRSDRSKEHRSDRDKEHRSDRDKEHRSDRDKEHRSE 1432
Query: 143 REKDKEK-EREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREV 201
REKD+ + +R K HRSG + + +RSDRD+ RS RD+E RS
Sbjct: 1433 REKDQHRSDRNKEHRSGERDKEHRSDRDKEHRS----------DRDKE----HRS----- 1473
Query: 202 IERERSRDRE----LKEREKERESRDNDKESRRPKEKKEQVEP 240
ERE+ + RE + EREK++ +K+ R ++KE EP
Sbjct: 1474 -EREKDQHREARTSIGEREKDQNRDHREKDQNRDHKEKEVKEP 1515
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 84/176 (47%), Gaps = 35/176 (19%)
Query: 89 DGGRDRPRSSWEHRDRDTERDRDRDREER-------------NGRDRNRDRGRDRDRRER 135
D RD +H +RD+ +DR+ R NG +RD RD+D
Sbjct: 1331 DHSRDS-----DHHNRDSSHRKDRESSHRGSDHSNGTASIVSNGNGSSRDHHRDKDHHRE 1385
Query: 136 DHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERS-RDREVIERERSRDREVIERE 194
H R E++ +R K HRS E +RSDRD+ RS RD+E RS ERE
Sbjct: 1386 SHREHRSSEREHRSDRSKEHRSDRDKE-HRSDRDKEHRSDRDKE----HRS------ERE 1434
Query: 195 RSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQRT 250
+ + R +R+++ ER+KE S D DKE R ++K+ + E E D R+ RT
Sbjct: 1435 KDQHRS----DRNKEHRSGERDKEHRS-DRDKEHRSDRDKEHRSEREKDQHREART 1485
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 39/150 (26%)
Query: 65 SRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHR-DRDTERDRDRDREERNGRD-- 121
SRD R+ D +E HRS R+ DR + EHR DRD E DRD+E R+ RD
Sbjct: 1373 SRDHHRDKDHHRESHRE-HRSSEREHRSDRSK---EHRSDRDKEHRSDRDKEHRSDRDKE 1428
Query: 122 ----------------------RNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGS 159
R+++ DRD ++H +DRD+E E+E+++ HR
Sbjct: 1429 HRSEREKDQHRSDRNKEHRSGERDKEHRSDRD---KEHRSDRDKEHRSEREKDQ-HREA- 1483
Query: 160 QSERYRSDRDERERSRDREVIERERSRDRE 189
R+ ERE+ ++R+ E++++RD +
Sbjct: 1484 -----RTSIGEREKDQNRDHREKDQNRDHK 1508
>gi|410897321|ref|XP_003962147.1| PREDICTED: LOW QUALITY PROTEIN: TRAF3-interacting protein 1-like
[Takifugu rubripes]
Length = 649
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 16/157 (10%)
Query: 46 SDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRD 105
+++K E D H+ + S+ RD + H R +ER R +D+ +++D
Sbjct: 168 NNDKGEQKDPAHHKEQDSRRRDGEKEHHRGRERSDKHQRREQEGHTKDKSHEQERDKEKD 227
Query: 106 TERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDRE------KDKEKEREKSHRSGS 159
R R++DRE + RD++++R R ERD D +RDRE KDKEK+R++ H S +
Sbjct: 228 KARSREKDRERHHERDKDKERDR---HHERDKDEERDRERHHERDKDKEKDRDRHHDSHA 284
Query: 160 QSERYRSDRDERERSRDREVIERERSRDREVIERERS 196
ER D+D ++R R + ER+R R++E ER +S
Sbjct: 285 APER---DKD-KQRGRGK---ERQRERNKEPEERNKS 314
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 42 SKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEH 101
+K KS E+ D + D RSR +D R+H+R K+++ H +D RDR R
Sbjct: 213 TKDKSHEQERDKEKDKARSR---EKDRERHHERDKDKERDRHHERDKDEERDRER--HHE 267
Query: 102 RDRDTERDRDRDREERNG--RDRNRDRGRDRDR-RERD 136
RD+D E+DRDR + RD+++ RGR ++R RER+
Sbjct: 268 RDKDKEKDRDRHHDSHAAPERDKDKQRGRGKERQRERN 305
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 16/102 (15%)
Query: 544 SECLLLKNMFDPK----NETYEEFDMDIKEDVEGECSKFGKLKHIFV------EKDSAGF 593
S L L NM P+ N+ YEE I+EDV EC KFG + + + + SAG
Sbjct: 484 SRVLQLLNMVTPEELMDNDDYEE----IREDVLEECKKFGNVLSLKIPRPIGGNRQSAGV 539
Query: 594 --VYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEA 633
+Y++FE +SA A RAL GR F+ + + T+ + YE
Sbjct: 540 GKIYVKFEQVESATKALRALAGRKFSDRTVVTTYFPEENYEV 581
>gi|299741815|ref|XP_001832059.2| RNP domain-containing protein [Coprinopsis cinerea okayama7#130]
gi|298404895|gb|EAU89705.2| RNP domain-containing protein [Coprinopsis cinerea okayama7#130]
Length = 588
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 25/198 (12%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-AL 309
V+ + RD+ EF AG+V +++ SKG G VEF AI L
Sbjct: 181 VYVGNLSYDVKYRDLIEFMRGAGEVLFAEVLVTPTGI-SKGCGIVEFASQEDAQRAIREL 239
Query: 310 SGQPLLGQPVMVKP---SEAEKNLVQSNSSIAGASGGGTGPYSGGARR------------ 354
S QPLLG+PV ++ +EA I G + G G ++ R
Sbjct: 240 SEQPLLGRPVFIREDRENEARFGATPVPGKI-GMAMAGQGLHAAPPPRPPSHNYFSGGPG 298
Query: 355 -------LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDAR 407
LYVGNL + L+ +F G++ + + G KG G V F ++DA+
Sbjct: 299 GGNPGNQLYVGNLPYQAGWQDLKDLFRAAGSIVRADINIGVDGRPKGSGTVVFETVKDAQ 358
Query: 408 NALNLNGQLEIVGRAIKV 425
A+++ + GR ++V
Sbjct: 359 QAISMYNGFDWYGRILEV 376
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLN 413
R+YVGNL +++ L + G V ++ + TG KG G V+FA EDA+ A+
Sbjct: 180 RVYVGNLSYDVKYRDLIEFMRGAGEVLFAEVLVTPTGISKGCGIVEFASQEDAQRAIREL 239
Query: 414 GQLEIVGRAIKV 425
+ ++GR + +
Sbjct: 240 SEQPLLGRPVFI 251
>gi|237836525|ref|XP_002367560.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211965224|gb|EEB00420.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221484014|gb|EEE22318.1| hypothetical protein TGGT1_018190 [Toxoplasma gondii GT1]
gi|221505287|gb|EEE30941.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 532
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLN 413
R+YVG+L + +TE +++ VF+ FGT+ V +P E KGF FV++A E A AL+
Sbjct: 76 RIYVGSLDYYLTELEIKSVFQAFGTIVSVDMP-KEGDRSKGFCFVEYASPEAAEMALSTM 134
Query: 414 GQLEIVGRAIKV 425
+ GR IKV
Sbjct: 135 QNFVLKGRTIKV 146
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 544 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGF-VYLRFENTQ 602
S +LL NM P E D ++K++V ECSKFG +K + V +++ F +
Sbjct: 442 SPVVLLSNMVTPS-----EVDGELKDEVREECSKFGSIKRVEVHTLKETVRIFVEFSDLS 496
Query: 603 SAFAAQRALHGRWFAGKMITA 623
A A +LHGRWF G+ I A
Sbjct: 497 GAREAIPSLHGRWFGGRQIIA 517
>gi|358339509|dbj|GAA27913.2| poly(U)-binding-splicing factor PUF60-B [Clonorchis sinensis]
Length = 512
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGH-CKGFGFVQFARLEDARNAL-N 411
R+YVG++ F + ED+LR+ F PFG ++ V L D T KGF FV+F E A AL
Sbjct: 93 RIYVGSISFEVGEDELRRTFGPFGPIKSVALSWDATLQKHKGFAFVEFEVPEAASLALEQ 152
Query: 412 LNGQLEIVGRAIKV 425
+NG + GR +KV
Sbjct: 153 MNGH-TLAGRTLKV 165
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 544 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAGFVYLRFENTQS 603
S LLL+NM + EE D D++ +V ECS FG + +FV S +++ F+ + S
Sbjct: 423 SRVLLLENMV-----SAEEVDADLEGEVAEECSNFGHVLRVFVHVRSDVRIFVHFDRSDS 477
Query: 604 AFAAQRALHGRWFAGKMITA 623
A AA +L+ R+FAG+++ A
Sbjct: 478 AQAACESLNQRFFAGRVVHA 497
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|332195625|gb|AEE33746.1| Splicing factor U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 25/176 (14%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ +++ K +VE
Sbjct: 252 RHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 311
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIAGASGGGT 345
V A+AL G L G PV V+ PS+ NL N G S G T
Sbjct: 312 VEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNL---NLGAVGLSSGST 368
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
G G R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 369 GGLEG-PDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVY 423
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 128/331 (38%), Gaps = 65/331 (19%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTV----------ELVQLPLDETGHCKGFGFVQFA 401
ARR+YVG L E + F + +V + ++ H K F FV+
Sbjct: 254 ARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYIN---HEKKFAFVEMR 310
Query: 402 RLEDARNALNLNGQLEIVGRAIKVSAVTDQS------------------GLQDLGANTTG 443
+E+A NA+ L+G + + G +KV TD + G L + +TG
Sbjct: 311 SVEEASNAMALDGII-LEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGSTG 369
Query: 444 DFDDDE---GGGLSL---NARSRALL----------MQKLDRSGSATTIAGSAVT-PAVN 486
+ + GGL + R LL + K +G++ A P+V
Sbjct: 370 GLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVT 429
Query: 487 STALPLPTAPLLGAASAVSTL-VPPLVQGTVPTHPGQ---LGTALQVPTASVPIFDTIGV 542
A A L G TL V +QG + P Q L A Q +F G
Sbjct: 430 DIA----CAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPGGT 485
Query: 543 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS--------AGFV 594
P++ + L + + +E +I ED+ E KFG L ++ + + + G V
Sbjct: 486 PTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKV 545
Query: 595 YLRFENTQSAFAAQRALHGRWFAGKMITATF 625
+L + + + A+ ++GR F G + A +
Sbjct: 546 FLEYADVDGSSKARSGMNGRKFGGNQVVAVY 576
>gi|395536629|ref|XP_003770315.1| PREDICTED: nucleolin [Sarcophilus harrisii]
Length = 668
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 38/250 (15%)
Query: 229 RRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERD----VYEFFSRAG-KVRDVRLIMD 283
+ P+ KK++++ E +FA + + + +FF++ V DVR+
Sbjct: 344 KAPEAKKQKLDGEWTEASTNFNLFAGNLNFNKSASELKTGISDFFAKKDLTVVDVRIGAT 403
Query: 284 RNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGG 343
R GYVEF + A+ LSG +LG SE + + N
Sbjct: 404 RK------FGYVEFESAEDMEKAMELSGSKVLG-------SEIKLEKAKENKK------- 443
Query: 344 GTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARL 403
AR L+V NL + +T+++L++VFE + LV + G KG +V+F
Sbjct: 444 -----DRDARTLFVKNLPYKVTQEELKEVFEDAIEIRLV---CTKDGTPKGIAYVEFKTE 495
Query: 404 EDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGA-NTTGDFDDDEGGGLSLNARSRAL 462
D AL EI GRA+ + D +G + G N G ++ GG S A S+ L
Sbjct: 496 ADVDKALEEKQGTEIDGRAL----ILDYTGEKSQGQENARGGKNNAWGGSNSKPADSKTL 551
Query: 463 LMQKLDRSGS 472
++ L S +
Sbjct: 552 VLNNLAYSAT 561
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 245 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVP 304
+RD RT+F + K + ++ E F A ++RL+ ++ KG+ YVEF V
Sbjct: 444 DRDARTLFVKNLPYKVTQEELKEVFEDA---IEIRLVCTKDGT-PKGIAYVEFKTEADVD 499
Query: 305 MAIA-LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGG------ARRLYV 357
A+ G + G+ +++ EK+ Q N A GG + G ++ L +
Sbjct: 500 KALEEKQGTEIDGRALILD-YTGEKSQGQEN-----ARGGKNNAWGGSNSKPADSKTLVL 553
Query: 358 GNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKG 394
NL ++ TE+ L++VFE + +P + G KG
Sbjct: 554 NNLAYSATEESLQEVFE---KATSISMPQNNQGRPKG 587
>gi|156070760|gb|ABU45175.1| unknown [Solanum melongena]
Length = 553
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRA------GKVRDVRLIMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS +++ K +VE
Sbjct: 214 RHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 273
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASGGG 344
V A+AL G G PV V+ PS+ NL + + G+SGG
Sbjct: 274 VEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGL 333
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 334 EGP-----DRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVY 385
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 566 DIKEDVEGECSKFGKLKHIFVEKDSA--------GFVYLRFENTQSAFAAQRALHGRWFA 617
DI ED+ EC KFG L ++ + + + G V+L + + S+ A++ L+GR F
Sbjct: 471 DILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFG 530
Query: 618 GKMITATF 625
G + A F
Sbjct: 531 GNQVIAVF 538
>gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
thaliana]
Length = 568
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 25/176 (14%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ +++ K +VE
Sbjct: 231 RHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 290
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIAGASGGGT 345
V A+AL G L G PV V+ PS+ NL N G S G T
Sbjct: 291 VEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNL---NLGAVGLSSGST 347
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
G G R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 348 GGLEG-PDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVY 402
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 128/331 (38%), Gaps = 65/331 (19%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTV----------ELVQLPLDETGHCKGFGFVQFA 401
ARR+YVG L E + F + +V + ++ H K F FV+
Sbjct: 233 ARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYIN---HEKKFAFVEMR 289
Query: 402 RLEDARNALNLNGQLEIVGRAIKVSAVTDQS------------------GLQDLGANTTG 443
+E+A NA+ L+G + + G +KV TD + G L + +TG
Sbjct: 290 SVEEASNAMALDGII-LEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGSTG 348
Query: 444 DFDDDE---GGGLSL---NARSRALL----------MQKLDRSGSATTIAGSAVT-PAVN 486
+ + GGL + R LL + K +G++ A P+V
Sbjct: 349 GLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVT 408
Query: 487 STALPLPTAPLLGAASAVSTL-VPPLVQGTVPTHPGQ---LGTALQVPTASVPIFDTIGV 542
A A L G TL V +QG + P Q L A Q +F G
Sbjct: 409 DIA----CAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPGGT 464
Query: 543 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDS--------AGFV 594
P++ + L + + +E +I ED+ E KFG L ++ + + + G V
Sbjct: 465 PTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKV 524
Query: 595 YLRFENTQSAFAAQRALHGRWFAGKMITATF 625
+L + + + A+ ++GR F G + A +
Sbjct: 525 FLEYADVDGSSKARSGMNGRKFGGNQVVAVY 555
>gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum melongena]
Length = 554
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRA------GKVRDVRLIMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS +++ K +VE
Sbjct: 215 RHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 274
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASGGG 344
V A+AL G G PV V+ PS+ NL + + G+SGG
Sbjct: 275 VEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGL 334
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 335 EGP-----DRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVY 386
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 566 DIKEDVEGECSKFGKLKHIFVEKDSA--------GFVYLRFENTQSAFAAQRALHGRWFA 617
DI ED+ EC KFG L ++ + + + G V+L + + S+ A++ L+GR F
Sbjct: 472 DILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFG 531
Query: 618 GKMITATF 625
G + A F
Sbjct: 532 GNQVIAVF 539
>gi|393243611|gb|EJD51125.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 526
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 235 KEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY 294
+E VE +R+ R V+ + RD+ EF AG+V +++ N SKG G
Sbjct: 136 EEAVEMSKSSKRECR-VYVGNLSYDVKYRDLMEFMRGAGEVLFAEVLVTPNGI-SKGCGI 193
Query: 295 VEFYDVMSVPMAIA-LSGQPLLGQPVMVKP---SEAEKNLVQSNSSIAGASGGGTG---- 346
VEF AI LS PLLG+PV ++ EA I GA+ G G
Sbjct: 194 VEFGSYDDAQRAIRDLSEVPLLGRPVFIREDREGEARFGATPVPGKI-GAAMAGQGYTTQ 252
Query: 347 ----PYS---------------GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD 387
P S +LYVGNL + L+ +F G++ + +
Sbjct: 253 PPPRPPSHNVYGGGGNNGGGGGNPGNQLYVGNLPYQAGWQDLKDLFRQAGSIVRADINIG 312
Query: 388 ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
G KG G V + ++DA NA+++ E GR ++V
Sbjct: 313 LDGRAKGSGTVVYESVKDADNAISMYNGYEWFGRKLEV 350
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 330 LVQSNSSIAGASGG--GTGPYSG----GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQ 383
+V S AG G G Y+G ++++ VGNL ++ + L ++FE GTV+ +
Sbjct: 398 MVDGGQSYAGVPTGPRGFSAYAGYDVPPSQQIMVGNLPWSTANEDLVELFETTGTVQEAE 457
Query: 384 LPLDETGHCKGFGFVQFARLEDARNAL 410
+ L E KG G VQFA + +A A+
Sbjct: 458 V-LFEGQRSKGAGVVQFADVAEAETAI 483
>gi|356517814|ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit A-like [Glycine max]
Length = 605
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 25/179 (13%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRA-GKVRDVRL-----IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ K+ +++ K +VE
Sbjct: 266 RHARRVYVGGLPPTANEQSVATFFSQVMAKIGGNTAGPGDAVVNVYINHDKKFAFVEMRS 325
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIAGASGGGT 345
V A+AL G G PV V+ PS+ NL + S GG
Sbjct: 326 VEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLTPGSAGGL 385
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
G R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 386 D----GPDRIFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDL 440
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 561 EEFDMDIKEDVEGECSKFGKLKHIFVEKD--------SAGFVYLRFENTQSAFAAQRALH 612
E++D +I +D+ ECSKFG L ++ + + G V+L + + A A+ L+
Sbjct: 521 EDYD-EILDDMRQECSKFGTLVNVVIPRPPPDGEPAAGVGKVFLEYVDIDGATKARAGLN 579
Query: 613 GRWFAGKMITATF 625
GR F G + A F
Sbjct: 580 GRKFDGNQVVAVF 592
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 25/179 (13%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRA-GKVRDVRL-----IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ K+ +++ K +VE
Sbjct: 261 RHARRVYVGGLPPTANEQSVATFFSQVMAKIGGNTAGPGDAVVNVYINHDKKFAFVEMRS 320
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIAGASGGGT 345
V A+AL G G PV V+ PS+ NL + S GG
Sbjct: 321 VEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLTPGSAGGL 380
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
G R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 381 D----GPDRVFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDL 435
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 12/77 (15%)
Query: 557 NETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA--------GFVYLRFENTQSAFAAQ 608
+E YEE I +D+ ECSKFG L ++ + + + G V+L + + A A+
Sbjct: 515 DEDYEE----ILDDMRQECSKFGTLVNVVIPRPPSDGEPAAGVGKVFLEYVDIDGATKAR 570
Query: 609 RALHGRWFAGKMITATF 625
L+GR F G + A F
Sbjct: 571 AGLNGRKFDGNQVVAVF 587
>gi|75338883|sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 555
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 27/177 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSR------AGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS +++ K +VE
Sbjct: 218 RHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 277
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASGGG 344
V A+AL G G PV V+ PS+ NL + + S G+SGG
Sbjct: 278 VEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGSTPGSSGGL 337
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 338 EGP-----DRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVY 389
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 566 DIKEDVEGECSKFGKLKHIFVEKDSA--------GFVYLRFENTQSAFAAQRALHGRWFA 617
DI ED+ EC KFG L ++ + + + G V+L + + + A++ L+GR F
Sbjct: 475 DILEDMRTECEKFGALVNVVIPRPNPNGVPTPGLGKVFLEYADVDGSSKARQGLNGRKFG 534
Query: 618 GKMITATF 625
G + A F
Sbjct: 535 GNQVVAVF 542
>gi|356544468|ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779929 [Glycine max]
Length = 744
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 94/182 (51%), Gaps = 10/182 (5%)
Query: 249 RTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA 308
+T+F + + DV +FF AG+V DVR D ++ + KG G+VEF + A+
Sbjct: 474 KTLFVGNLPFSVERADVEDFFKDAGEVVDVRFATD-DTGKFKGFGHVEFATAAAAQKALG 532
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
L+GQ L + + + + E+ NSS S +G G ++ ++V ++ ED+
Sbjct: 533 LNGQQLFNRELRLDLAR-ERGAYTPNSSNWNNSSQKSG--RGQSQTVFVRGFDTSLGEDE 589
Query: 369 LR-QVFEPFGT---VELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAI 423
+R + E FG+ + V +P D E+G KGF +V F+ ++ AL L+ + E+ G +
Sbjct: 590 IRGSLQEHFGSCGDITRVSIPKDYESGAVKGFAYVDFSDVDSMGKALELH-ETELGGYTL 648
Query: 424 KV 425
V
Sbjct: 649 TV 650
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARN 408
+G ++ L+VGNL F++ + F+ G V V+ D+TG KGFG V+FA A+
Sbjct: 470 TGASKTLFVGNLPFSVERADVEDFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAAAAQK 529
Query: 409 ALNLNGQ 415
AL LNGQ
Sbjct: 530 ALGLNGQ 536
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 9/113 (7%)
Query: 66 RDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRD 125
+++ R+ DR KE+D R+ +D RD+ R+ + RD+D +++DRDR + RD++R+
Sbjct: 1880 KEKDRDQDRSKEKDRDQDRNKEKD--RDQDRNKEKDRDQDRNKEKDRDRSKEKDRDQDRN 1937
Query: 126 RGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDRE 178
+ +DRDR DR +EKD+E+ RE+ G + ER R ER R +D E
Sbjct: 1938 KEKDRDR-------DRSKEKDRERSRERERSRGKEGERQRETEGERHRDQDGE 1983
>gi|122245119|sp|Q2QKB3.1|U2A2A_WHEAT RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|68036924|gb|AAY84881.1| U2AF large subunit [Triticum aestivum]
Length = 591
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 25/176 (14%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRA-----GKVRDV-RLIMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FF++ G + +++ K +VE
Sbjct: 269 RHARRVYVGGLPPIANEQTVAVFFNQVMAAIGGNTFALGHAVVNVYINHDKKFAFVEMRS 328
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIAGASGGGT 345
V A+AL G G PV V+ PS+ NL + + +GGG
Sbjct: 329 VEEASNAMALDGIMFEGAPVKVRRPTDYNPSQAAALGPSQPNPNLNLAAVGLTPGAGGGL 388
Query: 346 GPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
G R++VG L + TE Q+R++ E FG + + D ETG+ KG+ F +
Sbjct: 389 E----GPDRIFVGGLPYYFTEAQVRELLETFGPLRGFDIVKDKETGNSKGYAFCLY 440
>gi|255089803|ref|XP_002506823.1| predicted protein [Micromonas sp. RCC299]
gi|226522096|gb|ACO68081.1| predicted protein [Micromonas sp. RCC299]
Length = 554
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 20/135 (14%)
Query: 281 IMDRNSRRSKGVGYVEFYDVMSVPMAIALSGQPLLG--------------QPVMVKPSEA 326
++ R K +VEF V A+AL G + G Q ++ P+
Sbjct: 261 VLSVYINRDKLFAFVEFRTVEEASNAMALDGVVMAGSQLRVRRPNDYQPQQAALIGPTTP 320
Query: 327 EKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL 386
+L N + G G G SG R+LYVGNL +TE Q+ ++ + FG V+ L +
Sbjct: 321 ADSL---NLAAVGLIPGVNGQSSG--RKLYVGNLPPYLTELQVLELLQSFGAVQAFNLVV 375
Query: 387 D-ETGHCKGFGFVQF 400
D +TG KG+GF ++
Sbjct: 376 DKDTGTLKGYGFFEY 390
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 544 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVE-------KDSAGF--V 594
SEC+ L NM + T +I ED + EC+ FG+L + + +D AG V
Sbjct: 453 SECVRLTNMVTREELTDPTEAREILEDTQEECAGFGELTRVVMPLPRRTRLEDPAGVGEV 512
Query: 595 YLRFENTQSAFAAQRALHGRWFAGKMITATFM 626
+L F + + A A R+L+GR FA ++++A F+
Sbjct: 513 FLLFADAEGAARAVRSLNGRKFADRVVSAGFI 544
>gi|195012259|ref|XP_001983554.1| GH15516 [Drosophila grimshawi]
gi|193897036|gb|EDV95902.1| GH15516 [Drosophila grimshawi]
Length = 1158
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 32/239 (13%)
Query: 13 VENP----EPAKEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRSRGSKSRDE 68
++NP P + KET N S D R S + KS E+ R R + R
Sbjct: 367 LDNPFRSRSPERRKET-KSRRNDSSPDSRRENSRRHKSKERQAATQTPPQRQRSKEKRQR 425
Query: 69 SRNHDRRKERDSSCHRSWSRDGGRDRPRS-------SWEHRDRDTERDRDRDREERNGRD 121
S+ R KER S R S++ R + R+ S E + R ER R ++R++ R
Sbjct: 426 SKEKQRSKERQRSKERQRSKERHRSKDRATSKERQQSKERQQRQKERKRSKERQKSKERL 485
Query: 122 RNRDRGRDRDR-----RERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDR-------- 168
R+++R R ++R R R D + +EK + KER KS ER++S
Sbjct: 486 RSKERQRSKERLRSKERLRSKDRPKSKEKLRSKERLKSKERVRSKERFKSKERVKSKEVL 545
Query: 169 --DERERSRDR-EVIERERSRDREVIERERSRDREVI---ERERSRDR-ELKEREKERE 220
ER+RS++R ER+RS+DR+ + +ER R +E + ER RS++R KER+K +E
Sbjct: 546 RSKERQRSKERLSSKERQRSKDRQRLSKERLRSKERLRSKERLRSKERLRSKERQKSKE 604
>gi|449496757|ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ +++ K +VE
Sbjct: 251 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 310
Query: 300 VMSVPMAIALSGQPLLGQPVMVK-PSEAEKNLV------QSNSSIAGASGGGTGPYSGGA 352
V A+AL G G PV V+ PS+ +L Q N ++ A+ G T +GG
Sbjct: 311 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 370
Query: 353 R---RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 371 EGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 425
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 542 VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK-------DSAGFV 594
V ++ L L + P+ +E DI ED+ GE KFG L ++ + + G V
Sbjct: 484 VSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGVGKV 543
Query: 595 YLRFENTQSAFAAQRALHGRWFAGKMITATF 625
+L + + SA A+ L+GR F G + A F
Sbjct: 544 FLEYADIDSATKARAGLNGRKFGGNQVMAVF 574
>gi|359476715|ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ +++ K +VE
Sbjct: 231 RHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 290
Query: 300 VMSVPMAIALSGQPLLGQPVMVK-PSEAEKNLV------QSNSSIAGASGGGTGPYSGGA 352
V A+AL G G PV V+ PS+ +L Q N ++ A+ G T +GG
Sbjct: 291 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 350
Query: 353 R---RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 351 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 405
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
Length = 589
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYDVMSVP 304
V+ + A+E+ V FFS+ +++ K +VE V
Sbjct: 257 VYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEAS 316
Query: 305 MAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIAGASGGGTGPYSG 350
A+AL G L G PV V+ PS+ NL N G S G TG G
Sbjct: 317 NAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNL---NLGAVGLSSGSTGGLEG 373
Query: 351 GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 374 -PDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVY 423
>gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ +++ K +VE
Sbjct: 228 RHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 287
Query: 300 VMSVPMAIALSGQPLLGQPVMVK-PSEAEKNLV------QSNSSIAGASGGGTGPYSGGA 352
V A+AL G G PV V+ PS+ +L Q N ++ A+ G T +GG
Sbjct: 288 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 347
Query: 353 R---RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 348 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 402
>gi|353229125|emb|CCD75296.1| putative fuse-binding protein-interacting repressor siahbp1
[Schistosoma mansoni]
Length = 520
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN 411
R+YVG++ +++ ED L+QVF PFG ++ V L D T KGF F++F E A+ A++
Sbjct: 95 NRVYVGSIAYDVKEDSLKQVFSPFGPIKSVNLSWDPSTQKHKGFAFLEFEYPEAAQLAID 154
Query: 412 LNGQLEIVGRAIKV 425
GR +KV
Sbjct: 155 QMNGTSFGGRQLKV 168
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
Query: 547 LLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAG-----FV--YLRFE 599
L+L+NM P E+ D +++ +V GECSK+G ++ + + +DSA FV ++ F
Sbjct: 427 LILRNMVGP-----EDCDDELEGEVAGECSKYGLVEKVLIHQDSAHETNEQFVNIFVVFS 481
Query: 600 NTQSAFAAQRALHGRWFAGKMITA 623
+ S A AL+ R+FAG+ ITA
Sbjct: 482 DPCSVHNAANALNKRYFAGRQITA 505
>gi|449441167|ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS+ +++ K +VE
Sbjct: 251 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 310
Query: 300 VMSVPMAIALSGQPLLGQPVMVK-PSEAEKNLV------QSNSSIAGASGGGTGPYSGGA 352
V A+AL G G PV V+ PS+ +L Q N ++ A+ G T +GG
Sbjct: 311 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 370
Query: 353 R---RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 371 EGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 425
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 542 VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEK-------DSAGFV 594
V ++ L L + P+ +E DI ED+ GE KFG L ++ + + G V
Sbjct: 484 VSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGVGKV 543
Query: 595 YLRFENTQSAFAAQRALHGRWFAGKMITATF 625
+L + + SA A+ L+GR F G + A F
Sbjct: 544 FLEYADIDSATKARAGLNGRKFGGNQVMAVF 574
>gi|255576469|ref|XP_002529126.1| prp4, putative [Ricinus communis]
gi|223531405|gb|EEF33239.1| prp4, putative [Ricinus communis]
Length = 1033
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 105/189 (55%), Gaps = 34/189 (17%)
Query: 58 HRSRGSKSRDESRNHDRRKE--RDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDRE 115
H S ++ R+ N ++R+E R+ S R RD R+R R + RD+D R+R RDR+
Sbjct: 296 HGSWNTQGREREMNWEQRREQGRERSRERDQRRDKDRERSRERDQRRDKD--RERSRDRD 353
Query: 116 ER--NGRDRNRDRGRDR-DRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERE 172
R GR+ +RD DR RRE++ + RDRE D++ +R+K ++E
Sbjct: 354 LRREKGREGSRDSSVDRYRRREKEQERSRDREVDRDLKRQK----------------QQE 397
Query: 173 RSRDREVIERERSRDREVIERERSRDREVI-----ERE--RSRDRELKEREKERESRDND 225
RS DREV +R++ ++R+ ERS DRE+I ERE RSR+ EL ++ ++ + R D
Sbjct: 398 RSWDREV-DRDQRKERQW---ERSLDREMINDRRREREQGRSREEELDKKRQKEKDRSKD 453
Query: 226 KESRRPKEK 234
K R E+
Sbjct: 454 KSMSRANER 462
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 549
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS +++ K +VE
Sbjct: 253 RHARRVYVGGLPPTANEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 312
Query: 300 VMSVPMAIALSGQPLLGQPVMVK-PSEAEKNLV------QSNSSI-AGASGGGTGPYSG- 350
V A+AL G G PV V+ PS+ +L Q N ++ GA G G G
Sbjct: 313 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGLTPGSAGGL 372
Query: 351 -GARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL---ED 405
G R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L +
Sbjct: 373 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 432
Query: 406 ARNALN 411
A ALN
Sbjct: 433 ACAALN 438
>gi|328785951|ref|XP_003250682.1| PREDICTED: hypothetical protein LOC411091 [Apis mellifera]
Length = 642
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 293 GYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGA 352
Y++F SV +++++G +E E N ++ N AS +
Sbjct: 419 AYIKFVSKESVKESLSMNG------------TEFEGNYLRVN-----ASNKSENKFD-SK 460
Query: 353 RRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALN 411
+ +++GNLH+N+ ++ + + F+ G +E V++ D +TG KGFG+V F + AL
Sbjct: 461 KSIFLGNLHYNIDDNTIIKHFKQCGEIESVRVIRDNKTGVGKGFGYVNFKNEDAVTLALE 520
Query: 412 LNGQLEIVGRAIKVSAVTDQ 431
L+G I R ++V V DQ
Sbjct: 521 LDGTT-ISNREVRVKPVVDQ 539
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 248 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI 307
++++F + D+ + + F + G++ VR+I D + KG GYV F + +V +A+
Sbjct: 460 KKSIFLGNLHYNIDDNTIIKHFKQCGEIESVRVIRDNKTGVGKGFGYVNFKNEDAVTLAL 519
Query: 308 ALSGQPLLGQPVMVKP 323
L G + + V VKP
Sbjct: 520 ELDGTTISNREVRVKP 535
>gi|339006472|ref|ZP_08639047.1| scaffolding dockerin binding protein A [Brevibacillus laterosporus
LMG 15441]
gi|338775681|gb|EGP35209.1| scaffolding dockerin binding protein A [Brevibacillus laterosporus
LMG 15441]
Length = 1272
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 83/144 (57%), Gaps = 32/144 (22%)
Query: 102 RDRDTERDRDRDREERNGRDRNRDRGRDRD-RRERDHDTDRDREKDKEKEREKSHRSGSQ 160
+DRD E ++DRD+E RD+ ++ RD++ ++RD + ++DR+++ EK+R+K
Sbjct: 893 KDRDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKDRDREPEKDRDK------- 945
Query: 161 SERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDREL-KEREKER 219
E E+ RD+E E+ +D+E E+ RD+E E+ RD+E K+R+KE
Sbjct: 946 ---------EPEKDRDKE---PEKDKDKE---PEKDRDKE---PEKDRDKEPGKDRDKE- 986
Query: 220 ESRDNDKESRRPKEKKEQVEPEVD 243
+D DKE + ++K EPE D
Sbjct: 987 PGKDRDKEPGKDRDK----EPEKD 1006
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 31/192 (16%)
Query: 34 EDRVRSRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRD 93
E ++ ++ K E D DG +K ++ ++ D+ E+D RD +
Sbjct: 861 ELKIAVKTVTDKEKESKPDLGTDGE----AKDKEPEKDRDKEPEKDRDKEPEKDRDKEPE 916
Query: 94 RPRSSWEHRDRDTERDRDRDREERNGRDR----NRDRGRDRDR-RERDHDTDRDREKDKE 148
+ R +DRD E ++DRDRE RD+ +RD+ ++D+ +E + D D++ EKD++
Sbjct: 917 KDRDKEPEKDRDKEPEKDRDREPEKDRDKEPEKDRDKEPEKDKDKEPEKDRDKEPEKDRD 976
Query: 149 KEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSR 208
KE K DRD +E +DR ++E +DR+ E E+ RD+ E + R
Sbjct: 977 KEPGK-------------DRD-KEPGKDR---DKEPGKDRDK-EPEKDRDK---EPGKDR 1015
Query: 209 DRELKEREKERE 220
D+E ER+KE+E
Sbjct: 1016 DKE-PERDKEKE 1026
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 19/145 (13%)
Query: 113 DREERNGRDRNRDRGRDRDR---RERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRD 169
D+E+ + D D G +D+ ++RD + ++DR+K+ EK+R+K E + DRD
Sbjct: 871 DKEKESKPDLGTD-GEAKDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKDRDKEPEK-DRD 928
Query: 170 -ERERSRDREVIERERSRDREVIERERSRDREV-----IERERSRDREL-KEREKERESR 222
E E+ RDR E E+ RD+ E E+ RD+E E E+ RD+E K+R+KE +
Sbjct: 929 KEPEKDRDR---EPEKDRDK---EPEKDRDKEPEKDKDKEPEKDRDKEPEKDRDKE-PGK 981
Query: 223 DNDKESRRPKEKKEQVEPEVDPERD 247
D DKE + ++K+ + + +PE+D
Sbjct: 982 DRDKEPGKDRDKEPGKDRDKEPEKD 1006
>gi|156070781|gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]
Length = 557
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSR------AGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS +++ K +VE
Sbjct: 223 RHARRVYVGGLPPSANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 282
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASGGG 344
V A+AL G G PV V+ PS+ NL + + G+SGG
Sbjct: 283 VEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGL 342
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 343 EGP-----DRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVY 394
>gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum]
Length = 558
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSR------AGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS +++ K +VE
Sbjct: 221 RHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 280
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASGGG 344
V A+AL G G PV V+ PS+ NL + + G+SGG
Sbjct: 281 VEEASNAMALDGVVFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGL 340
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 341 EGP-----DRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVY 392
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 566 DIKEDVEGECSKFGKLKHIFVEKDSA--------GFVYLRFENTQSAFAAQRALHGRWFA 617
DI ED+ EC KFG L ++ + + + G V+L + + S+ A++ L+GR F
Sbjct: 478 DILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFG 537
Query: 618 GKMITATF 625
G + A F
Sbjct: 538 GNQVIAVF 545
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 20/186 (10%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS +++ K +VE
Sbjct: 234 RHARRVYVGGLPPTANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 293
Query: 300 VMSVPMAIALSGQPLLGQPVMVK-PSEAEKNLV------QSNSSIAGASGGGTGPYSGGA 352
V A+AL G G PV V+ PS+ +L Q N ++ A+ G T +GG
Sbjct: 294 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 353
Query: 353 R---RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL---ED 405
R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L +
Sbjct: 354 EGPDRIFVGGLPYYFTEGQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 413
Query: 406 ARNALN 411
A ALN
Sbjct: 414 ACAALN 419
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 566 DIKEDVEGECSKFGKLKHIFVEKDS--------AGFVYLRFENTQSAFAAQRALHGRWFA 617
DI ED+ EC KF L ++ + + S G V+L + + +SA A++ LHGR F
Sbjct: 491 DILEDMRLECGKF-TLVNLVIPRPSPTGDPTPGVGKVFLEYADVESANKARQGLHGRRFG 549
Query: 618 GKMITATF 625
G + A F
Sbjct: 550 GNQVVAVF 557
>gi|299470875|emb|CBN78824.1| Protein for assembly of pre-ribosomal particles containing 18S rRNA
[Ectocarpus siliculosus]
Length = 517
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 239 EPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFY 298
EP+V P TVF + DE + + F G ++ VR DR + +G G+VEFY
Sbjct: 367 EPKVKPA-GCTTVFIGNLSWSIDEDTIRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFY 425
Query: 299 DVMSVPMAIALSGQPLLGQPVMV 321
D V A+ L+ ++G+P+ V
Sbjct: 426 DGEHVDAAMKLANSDVMGRPIRV 448
>gi|432887647|ref|XP_004074952.1| PREDICTED: LOW QUALITY PROTEIN: nipped-B-like protein-like [Oryzias
latipes]
Length = 2690
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 24/187 (12%)
Query: 23 ETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSC 82
E+ G N + D VR + + + E+ +++ HRS SR E+ R + +S C
Sbjct: 587 ESNRGHSNDRRSDMVRQKHDQHSNSLHKEEKNNNSHRS----SRPETPKSSGRADYNSRC 642
Query: 83 H----RSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGR------DRNRDRGRDRDR 132
R R+ + R R +HRDR+ RDRD+ +E R DR++DR +D+DR
Sbjct: 643 DDDKVRHKERNKEKQRVREEDKHRDRNKTRDRDKSKEVEGPREAEIDKDRHKDREQDKDR 702
Query: 133 -------RERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERS 185
+ R D D+ R +DK ++ +K ER + RER++ + ER+R+
Sbjct: 703 EKESIEDKTRSRDKDKGRNRDKIRDVDKPREKEKDKEREKDKDRHRERTKGK---ERDRN 759
Query: 186 RDREVIE 192
R R+ E
Sbjct: 760 RKRKTKE 766
>gi|384249020|gb|EIE22503.1| hypothetical protein COCSUDRAFT_56177 [Coccomyxa subellipsoidea
C-169]
Length = 2243
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 128/283 (45%), Gaps = 59/283 (20%)
Query: 19 AKEKETANGDGNVKSEDRVRSR---SSKCKSDE-KVEDYDDDGHRSRGSKSRDESRNHDR 74
A+ E D + + DR SR +SK K + + E + G R + +D+ H
Sbjct: 667 ARSAENGGHDKHTSTSDRGNSRDEGNSKRKHEPVRWEPGQEGGARKKSKSDQDKDDRHKD 726
Query: 75 RKERDSSCHRSWSRDGGRDRPRSSWEH------RDRDTERDRDRDREERNGRDRNRDRGR 128
RK D R+GG + + R++D E+DR++DR+ G+DR+RD+ R
Sbjct: 727 RKSHD--------REGGHKEKKRKHKEKDKDRDREKDKEKDREKDRDRDIGKDRSRDKER 778
Query: 129 --------DRDRRERDHDTDRDREKDKEKER--------------------EKSHRSGSQ 160
DRDR+E+ + D REKD+EK+R EKSHRS +
Sbjct: 779 TKALEADGDRDRKEKQRERDSRREKDREKDREKERQREREKEKVRDRERAAEKSHRSERE 838
Query: 161 SERYRS-------DRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELK 213
E RS D+++ +RS++ R+RSR+ + +R +R V R+ D +
Sbjct: 839 KESRRSVEALKSRDQEQAQRSKEAPRDRRDRSREDDQRDRRSARPDAVDTARRTSDSRAR 898
Query: 214 EREKERESRDNDKESRRP-----KEKKEQVEP-EVDPERDQRT 250
R ESR + + P +E+ + EP + DP R R+
Sbjct: 899 SRPGREESRPSREPQPAPAKARGREETRRAEPIKEDPSRQHRS 941
>gi|384489930|gb|EIE81152.1| hypothetical protein RO3G_05857 [Rhizopus delemar RA 99-880]
Length = 293
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 223 DNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIM 282
D++KE+++PK +K++ EPE V+ + + FF+ G + V+
Sbjct: 73 DDNKEAKKPKVEKKKKEPEFG-------VWVGNLSYSTTVETIRNFFTDCGSITRVKCPK 125
Query: 283 DRNSR-RSKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVK-------------PSEAEK 328
+ ++KG Y+ F AIA S Q L G+ +++K P+EAEK
Sbjct: 126 GNGVKNKNKGFAYIFFATTEEQAKAIAKSEQELEGRSLLIKDAENFERADGSKAPTEAEK 185
Query: 329 NLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLP-LD 387
++ + + +++GNL F+ TE +R+ FE G + V++ +
Sbjct: 186 KEIKKQKNPPCPT-------------IFLGNLSFDTTEKSIREAFEWAGDIRKVRVATFE 232
Query: 388 ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQ 435
++G CKGF +V + +E A A+ + GR +V ++++ ++
Sbjct: 233 DSGKCKGFAYVDYHTVEAATKAIRAPDKHTFDGRKCRVEFASEEAHMR 280
>gi|357156009|ref|XP_003577312.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 576
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 27/180 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSR------AGKVRDVRLIMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V +F++ +++ K +VE
Sbjct: 238 RHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRS 297
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASGGG 344
V A+AL G G PV V+ PS+ NL + + G++GG
Sbjct: 298 VEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGL 357
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 358 EGP-----DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 412
>gi|440796324|gb|ELR17433.1| Sec7 and ankyrin domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1521
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 21/169 (12%)
Query: 48 EKVEDYDDDGH-RSRGSKSRDE--SRNHDRRKERDSSCHRSWSRDGG----RDRPRSSWE 100
EK+ + D H R R S+S E SR+ D K+R+ S+DGG +D + S +
Sbjct: 209 EKLTESDGKPHLRERPSESDKERVSRDGDSNKDRERGDKDRESKDGGGGRTKDGDKDSKD 268
Query: 101 HRDRD---TERDRDRDREERNGRDRNRDRGRDRDRRERDHDTD------RDREKDKEKER 151
+DR+ E+D+D+DR ER +DR +D+ R +DR ER +D R RE D K+R
Sbjct: 269 SKDRERTRDEKDKDKDRSERGDKDREKDKDRHKDRGERGDKSDGGKDRERARESD--KDR 326
Query: 152 EKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDRE 200
E+S + G + DRD+ + ++ +RER+R+ ++E+ +DRE
Sbjct: 327 ERSAKDGDKDRERDKDRDKEKEKDGKDSKDRERTREG---DKEKEKDRE 372
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 38/203 (18%)
Query: 54 DDDGHRSR--GSKSRDESRNHDRRKERDSSCHRS--WSRDGG---RDRPRSSWEH---RD 103
D D R+R +K +D S++ DR K+ D R DG R+RP S + RD
Sbjct: 176 DKDKERTRDGDNKDKDSSKDRDRDKDGDRQTLREKLTESDGKPHLRERPSESDKERVSRD 235
Query: 104 RDTERDR---DRDREERNG---------RDRNRDRGRDRDRRERDHDTDR------DREK 145
D+ +DR D+DRE ++G +D + R+R R E+D D DR DREK
Sbjct: 236 GDSNKDRERGDKDRESKDGGGGRTKDGDKDSKDSKDRERTRDEKDKDKDRSERGDKDREK 295
Query: 146 DKEKEREKSHR-----SGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRD-R 199
DK++ +++ R G ER R +RERS +RER +DR ++E+ +D +
Sbjct: 296 DKDRHKDRGERGDKSDGGKDRERARESDKDRERSAKDGDKDRERDKDR---DKEKEKDGK 352
Query: 200 EVIERERSRDRELKEREKERESR 222
+ +RER+R+ + KE+EK+RE R
Sbjct: 353 DSKDRERTREGD-KEKEKDRERR 374
>gi|75338884|sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 573
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V FFS +++ K +VE
Sbjct: 236 RHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRS 295
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNLVQSNSSIA-GASGGG 344
V A+AL G G P V+ PS+ NL + ++ G++GG
Sbjct: 296 VEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGL 355
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQF 400
GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 356 EGP-----DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 407
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 566 DIKEDVEGECSKFGKLKHIFVEKDS--------AGFVYLRFENTQSAFAAQRALHGRWFA 617
DI ED+ EC KFG L ++ + + S G V+L + + S+ A+++L+GR F
Sbjct: 493 DILEDMRTECGKFGSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSSSKARQSLNGRKFG 552
Query: 618 GKMITATF 625
G + A F
Sbjct: 553 GNQVVAVF 560
>gi|83314969|ref|XP_730591.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490359|gb|EAA22156.1| Drosophila melanogaster SD07741p [Plasmodium yoelii yoelii]
Length = 931
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 18/147 (12%)
Query: 70 RNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDR----DREERNGRDRNRD 125
RN + ++R+ R +R+ RDR R + R+R+ ERDR+R DR GRDRNR+
Sbjct: 711 RNREVERDRNRETERDRNREVERDRNRETERDRNREVERDRNREVERDRNRETGRDRNRE 770
Query: 126 RGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERS 185
GRDR+ RE + D +R+ EKD+ +E EK + +R R E R R+RE+ +R
Sbjct: 771 TGRDRN-REVERDRNREMEKDRNREVEKDRNRETGRDRNR----ETGRDRNREI---DRD 822
Query: 186 RDREVIERERSRDREVIERERSRDREL 212
R+RE+ +R R+RE+ +R R+RE+
Sbjct: 823 RNREI---DRDRNREI---DRDRNREM 843
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 96/163 (58%), Gaps = 34/163 (20%)
Query: 70 RNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRD 129
RN + ++R+ R +R+ RDR R + R+R+ E+DR+R+ E RDRNR+ RD
Sbjct: 639 RNRETERDRNREVERDRNREVERDRNREVEKDRNREVEKDRNREVE----RDRNREVERD 694
Query: 130 RDR---RERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSR 186
R+R R+R+ + +RDR ++ E++R + E ER R+REV ER R
Sbjct: 695 RNRETERDRNREVERDRNREVERDRNR----------------ETERDRNREV---ERDR 735
Query: 187 DREVIERERSRDREVIERERSRDRELKEREKERES-RDNDKES 228
+RE ER R+REV ER R+RE+ ER++ RE+ RD ++E+
Sbjct: 736 NRET---ERDRNREV---ERDRNREV-ERDRNRETGRDRNRET 771
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 85/143 (59%), Gaps = 21/143 (14%)
Query: 70 RNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRD 129
RN + K+R+ R +R+ RDR R + R+R+ ERDR+R+ E RDRNR+ RD
Sbjct: 671 RNREVEKDRNREVERDRNREVERDRNRETERDRNREVERDRNREVE----RDRNRETERD 726
Query: 130 RDR---RERDHDTDRDR----EKDKEKEREKSHRSGSQSERYRS---DRD-ERERSRDRE 178
R+R R+R+ +T+RDR E+D+ +E E+ + +R R DR+ E ER R+RE
Sbjct: 727 RNREVERDRNRETERDRNREVERDRNREVERDRNRETGRDRNRETGRDRNREVERDRNRE 786
Query: 179 VIERERSRDREVIERERSRDREV 201
+ E+ R+REV E+ R+RE
Sbjct: 787 M---EKDRNREV---EKDRNRET 803
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 82/130 (63%), Gaps = 28/130 (21%)
Query: 102 RDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQS 161
R+R+TERDR+R+ E RDRNR+ RDR+R + + DR+RE +K++ RE
Sbjct: 639 RNRETERDRNREVE----RDRNREVERDRNR---EVEKDRNREVEKDRNRE--------V 683
Query: 162 ERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERE- 220
ER R+ ER+R+R E ER R+REV ER R+REV ER+R+R+ ER++ RE
Sbjct: 684 ERDRNREVERDRNR-----ETERDRNREV---ERDRNREV-ERDRNRE---TERDRNREV 731
Query: 221 SRDNDKESRR 230
RD ++E+ R
Sbjct: 732 ERDRNRETER 741
>gi|281206591|gb|EFA80777.1| hypothetical protein PPL_06363 [Polysphondylium pallidum PN500]
Length = 710
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDET-GHCKGFGFVQFARLEDARNALNLN 413
L+V NL + TE L Q+F FG ++ +++ +ET G KG+ FV+ + AR A
Sbjct: 173 LFVANLEWWTTEQNLEQLFSEFGKLKNLKIFENETNGKSKGYAFVELQSHDIARQAKEKL 232
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTTGDF 445
E+ G+ I + ++ + Q L A TG F
Sbjct: 233 NNKELNGKTIIIKSMNQHTYQQVLLAFKTGSF 264
>gi|302658783|ref|XP_003021091.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
gi|291184970|gb|EFE40473.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
Length = 479
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 219 RESRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDV 278
RE DN R K +Q PE D T+F I ADE V E FS+ G ++ +
Sbjct: 325 RERADN-----RAKSFGDQTSPESD------TLFIGNISFSADENMVQELFSKYGAIQGI 373
Query: 279 RLIMDRNSRRSKGVGYVEFYDV 300
RL D S R KG GYV+F V
Sbjct: 374 RLPTDPESGRPKGFGYVQFSSV 395
>gi|320165239|gb|EFW42138.1| hypothetical protein CAOG_07523 [Capsaspora owczarzaki ATCC 30864]
Length = 598
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 544 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSAG--FVYLRFENT 601
S + L NM D +E D ++++V GECS FG ++ + V S ++++F
Sbjct: 507 SHIVALLNMIDA-----DEIDSMLEQEVGGECSNFGTVERVVVHVTSKNDVAIFVQFAQL 561
Query: 602 QSAFAAQRALHGRWFAGKMITATF 625
+ A AA AL+ RWF G+ + A
Sbjct: 562 EEADAAVLALNNRWFGGRQVRAQL 585
>gi|226497766|ref|NP_001152419.1| LOC100286059 [Zea mays]
gi|195656099|gb|ACG47517.1| splicing factor U2AF 65 kDa subunit [Zea mays]
Length = 596
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 37/207 (17%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVR--------LIMDRNSRRSKGVGYVEF 297
R R V+ + A+E+ V FF+ G + + +++ K +VE
Sbjct: 259 RHARRVYVGGLPPTANEQTVAIFFN--GVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEM 316
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASG 342
V A+AL G G PV V+ PS+ NL + + G++G
Sbjct: 317 RSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAG 376
Query: 343 GGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFA 401
G GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 377 GLEGP-----DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 431
Query: 402 RLE------DARNALNLNGQLEIVGRA 422
L A N + + + V RA
Sbjct: 432 DLNVTDIACAALNGIKMGDKTLTVSRA 458
>gi|223950169|gb|ACN29168.1| unknown [Zea mays]
gi|413920349|gb|AFW60281.1| splicing factor U2AF subunit [Zea mays]
Length = 594
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 31/182 (17%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVR--------LIMDRNSRRSKGVGYVEF 297
R R V+ + A+E+ V FF+ G + + +++ K +VE
Sbjct: 257 RHARRVYVGGLPPTANEQTVAIFFN--GVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEM 314
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASG 342
V A+AL G G PV V+ PS+ NL + + G++G
Sbjct: 315 RSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAG 374
Query: 343 GGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFA 401
G GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 375 GLEGP-----DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 429
Query: 402 RL 403
L
Sbjct: 430 DL 431
>gi|9858779|gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]
Length = 532
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 21/127 (16%)
Query: 290 KGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSN 334
K +VE V A+AL G G PV V+ PS+ NL + +
Sbjct: 245 KKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAV 304
Query: 335 SSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCK 393
G+SGG GP R++VG L + TE Q+R++ E FG + L D ETG+ K
Sbjct: 305 GLTPGSSGGLEGP-----DRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSK 359
Query: 394 GFGFVQF 400
G+ F +
Sbjct: 360 GYAFCVY 366
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 566 DIKEDVEGECSKFGKLKHIFVEKDSA--------GFVYLRFENTQSAFAAQRALHGRWFA 617
DI ED+ EC KFG L ++ + + + G V+L + + S+ A++ L+GR F
Sbjct: 452 DILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFG 511
Query: 618 GKMITATF 625
G + A F
Sbjct: 512 GNQVIAVF 519
>gi|413920348|gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays]
Length = 549
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 34/193 (17%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVR--------LIMDRNSRRSKGVGYVEF 297
R R V+ + A+E+ V FF+ G + + +++ K +VE
Sbjct: 257 RHARRVYVGGLPPTANEQTVAIFFN--GVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEM 314
Query: 298 YDVMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASG 342
V A+AL G G PV V+ PS+ NL + + G++G
Sbjct: 315 RSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAG 374
Query: 343 GGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFA 401
G GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F +
Sbjct: 375 GLEGP-----DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 429
Query: 402 RL---EDARNALN 411
L + A ALN
Sbjct: 430 DLNVTDIACAALN 442
>gi|242069419|ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 30/191 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V +F++ +++ K +VE
Sbjct: 208 RHARRVYVGGLPPSANEQTVAVYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRS 267
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASGGG 344
V A+AL G G PV V+ PS+ NL + + AG++GG
Sbjct: 268 VEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTAGSTGGL 327
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 328 EGP-----DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 382
Query: 404 ---EDARNALN 411
+ A ALN
Sbjct: 383 TVTDIACAALN 393
>gi|195427177|ref|XP_002061655.1| GK17071 [Drosophila willistoni]
gi|194157740|gb|EDW72641.1| GK17071 [Drosophila willistoni]
Length = 1358
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 24/151 (15%)
Query: 100 EHRDRDTERDRDRDREERNGRDRNRDRGRDRD-RRERDHDTDRDREKDKEKEREKSHRSG 158
E + +DT++ R+R R R ++R R R+R ++R +R R K++++ EKS+
Sbjct: 704 ESQKKDTQKSRERPRSSERQRSKDRQRSRERHISKDRHRSKERQRSKERQRSVEKSNVRS 763
Query: 159 SQSERYRS-----DRDERERSRDREVIERERSRDREVIERERSRD---REVIERERSRDR 210
ER +S RD ++RS DR +ER R R E++RS+D R+ +ER+RS+DR
Sbjct: 764 VNKEREKSKERQRSRDGKQRSVDRTARSKERQRSR---EKQRSKDRQGRQSVERQRSKDR 820
Query: 211 E------------LKEREKERESRDNDKESR 229
+ KER ++R R D+ R
Sbjct: 821 QRSKQRQPSRSAGSKERNQQRRDRSKDRHRR 851
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 20/149 (13%)
Query: 92 RDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRR-ERDHDTDRDREKDKEKE 150
R+RPRSS R +D +R R+R + R + R R ++R R E+ + ++E++K KE
Sbjct: 714 RERPRSSERQRSKDRQRSRERHISKDRHRSKERQRSKERQRSVEKSNVRSVNKEREKSKE 773
Query: 151 REKSH--------RSGSQSERYRSDRDERERSRDRE---VIERERSRDREVIERER---- 195
R++S R+ ER RS E++RS+DR+ +ER+RS+DR+ ++ +
Sbjct: 774 RQRSRDGKQRSVDRTARSKERQRSR--EKQRSKDRQGRQSVERQRSKDRQRSKQRQPSRS 831
Query: 196 --SRDREVIERERSRDRELKEREKERESR 222
S++R R+RS+DR ++R SR
Sbjct: 832 AGSKERNQQRRDRSKDRHRRDRRSNSNSR 860
>gi|449531099|ref|XP_004172525.1| PREDICTED: uncharacterized protein LOC101223830, partial [Cucumis
sativus]
Length = 500
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 19/189 (10%)
Query: 247 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMA 306
+ +T+F + + ++ D+ FF GK VR D + R KG G+VEF A
Sbjct: 237 ESKTLFVGNLSFQIEQADLENFFKDVGKPVHVRFASDHDGRF-KGFGHVEFESPEVAKKA 295
Query: 307 IALSGQPLLGQPVMV-----KPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLH 361
+ L+G+ LL + V + K S + + N+S GG GP ++ ++V
Sbjct: 296 LELNGELLLNREVRLDMAREKGSYTPYDSRERNNSF---QKGGRGP----SQTVFVRGFD 348
Query: 362 FNMTEDQLRQV----FEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQL 416
++ ED++R F G + V +P D ETG+ KG ++ F + AL LNG
Sbjct: 349 RSLGEDEIRSALQDHFGACGDINRVSIPKDYETGNVKGMAYMDFGDSDSFNKALELNGS- 407
Query: 417 EIVGRAIKV 425
E+ G + V
Sbjct: 408 ELHGNYLTV 416
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARN 408
SG ++ L+VGNL F + + L F+ G V+ D G KGFG V+F E A+
Sbjct: 235 SGESKTLFVGNLSFQIEQADLENFFKDVGKPVHVRFASDHDGRFKGFGHVEFESPEVAKK 294
Query: 409 A 409
A
Sbjct: 295 A 295
>gi|380026003|ref|XP_003696751.1| PREDICTED: uncharacterized protein LOC100864850 [Apis florea]
Length = 632
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 49/201 (24%)
Query: 247 DQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL----------------IMDRNSRRSK 290
D+RT+F + ++ + + F + GK+ +RL I + + K
Sbjct: 346 DERTIFVGNLPKDVTKKKLRKLFKQFGKIDTIRLRGKIAKSVNVSKRVAAIKNELHPKLK 405
Query: 291 GV-GYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYS 349
V Y++F SV +++++G G + V S +N S SI
Sbjct: 406 SVYAYIKFVSKESVKESLSINGTEFEGNYLRVNASNKSENKFDSKKSI------------ 453
Query: 350 GGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARN 408
++GNLH+N+ ++ + + F+ G +E V++ D +TG KGFG+V F EDA
Sbjct: 454 ------FLGNLHYNIDDNTIIKHFKQCGEIESVRVVRDNKTGVGKGFGYVNFKN-EDA-- 504
Query: 409 ALNLNGQLEIVGRAIKVSAVT 429
V A+++ T
Sbjct: 505 ----------VTLALELDGTT 515
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 248 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI 307
++++F + D+ + + F + G++ VR++ D + KG GYV F + +V +A+
Sbjct: 450 KKSIFLGNLHYNIDDNTIIKHFKQCGEIESVRVVRDNKTGVGKGFGYVNFKNEDAVTLAL 509
Query: 308 ALSGQPLLGQPVMVKP 323
L G + + V VKP
Sbjct: 510 ELDGTTISNREVRVKP 525
>gi|193848546|gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]
Length = 569
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 30/191 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V +F++ +++ K +VE
Sbjct: 232 RHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRS 291
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASGGG 344
V A+AL G G PV V+ PS+ NL + + G++GG
Sbjct: 292 VEEASNAMALDGILFEGAPVKVRRPTDYNPSLASALGPSQPSSNLNLAAVGLTPGSAGGL 351
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
GP R++VG L + TE Q+R++ E FG++ L D ETG+ KG+ F + L
Sbjct: 352 EGP-----DRIFVGGLPYYFTEAQVRELLESFGSLRGFDLVKDRETGNSKGYAFCVYQDL 406
Query: 404 ---EDARNALN 411
+ A ALN
Sbjct: 407 NVTDIACAALN 417
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 561 EEFDMDIKEDVEGECSKFGKLKHIFVEKD--------SAGFVYLRFENTQSAFAAQRALH 612
EE++ DI ED+ E K+G L + + + G V+L + + + A+ A+H
Sbjct: 485 EEYE-DIMEDMRLEAGKYGTLVKVVIPRPHPSGEPVAGVGKVFLEYADVDGSTKAKTAMH 543
Query: 613 GRWFAGKMITATF 625
GR F G + A F
Sbjct: 544 GRKFGGNPVVAVF 556
>gi|195444734|ref|XP_002070004.1| GK11259 [Drosophila willistoni]
gi|194166089|gb|EDW80990.1| GK11259 [Drosophila willistoni]
Length = 389
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD--ETGHCKGFGFVQFARLEDARNALN 411
R++VG L N+T+D + ++F FG V+ V+ P D +G +V++ ED ++A+
Sbjct: 238 RIHVGRLTRNVTKDHVLEIFSSFGEVKSVEFPTDRFHPNFGRGVAYVEYGTAEDCKSAMK 297
Query: 412 LNGQLEIVGRAIKVSAV 428
+I G+ I VS V
Sbjct: 298 HMDGGQIDGQEITVSPV 314
>gi|145501258|ref|XP_001436611.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403752|emb|CAK69214.1| unnamed protein product [Paramecium tetraurelia]
Length = 3975
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 108/186 (58%), Gaps = 8/186 (4%)
Query: 66 RDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRD 125
R + + D++K++D + + + +DR + + + + ER +D+++ ++ +DR D
Sbjct: 559 RTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQERTQDKEQNKQKQQDRTSD 618
Query: 126 RGRDRDRRE-RDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERER 184
+ +D+ +++ R D ++D++K +++ ++K Q +R + ++++ +DR +++
Sbjct: 619 KEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDR---TQDK 675
Query: 185 SRDREVIERERSRDREVIERERSRDREL-KEREKERES-RDNDKESRRPKEKKEQVEPEV 242
+D++ +++R+ D+E ++++ +DR E++K+++ R DKE + K++ + E
Sbjct: 676 EQDKQK-QQDRTSDKEQ-DKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQ 733
Query: 243 DPERDQ 248
D ++ Q
Sbjct: 734 DKQQQQ 739
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 114/192 (59%), Gaps = 11/192 (5%)
Query: 32 KSEDRVRSR-SSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDG 90
K ++R + + +K K ++ D + D + + S +E D++K++D + + ++
Sbjct: 597 KQQERTQDKEQNKQKQQDRTSDKEQDKQKQQDRTSDNE---QDKQKQQDRTQDKEQNKQK 653
Query: 91 GRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRE-RDHDTDRDREKDKEK 149
+DR + + + + +R +D++++++ +DR D+ +D+ +++ R D ++D++K +++
Sbjct: 654 QQDRTSDNEQDKQQQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDR 713
Query: 150 EREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRD 209
++K Q +R + ++++ +DR ++E+++ + +++R+ D E +R++S+D
Sbjct: 714 TQDKEQNKQKQQDRTSDNEQDKQQQQDR-TQDKEQNKQK---QQDRTSDNEQ-DRQKSQD 768
Query: 210 R-ELKEREKERE 220
R + KE++K+++
Sbjct: 769 RTQDKEQDKQKQ 780
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 66 RDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRD 125
+D+ + +R ++++ + + R +++ + + R D E+D+ + ++ +++N+
Sbjct: 593 QDKQKQQERTQDKEQNKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQ 652
Query: 126 RGRDRDR-RERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERER 184
+ +DR E+D +DR +DKE++++K S E + + +++R+ D E ++++
Sbjct: 653 KQQDRTSDNEQDKQQQQDRTQDKEQDKQKQQDRTSDKE--QDKQKQQDRTSDNEQ-DKQK 709
Query: 185 SRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDP 244
+DR ++E+++ + +++R+ D E + +++++ R DKE + K++ + E D
Sbjct: 710 QQDR-TQDKEQNKQK---QQDRTSDNE--QDKQQQQDRTQDKEQNKQKQQDRTSDNEQDR 763
Query: 245 ERDQ 248
++ Q
Sbjct: 764 QKSQ 767
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/189 (16%), Positives = 107/189 (56%), Gaps = 14/189 (7%)
Query: 66 RDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRD 125
R + D++K++D + + ++R + +++ + +R D++++++ +DR D
Sbjct: 573 RTSDKEQDKQKQQDRTSDNEQDKQKQQERTQDKEQNKQKQQDRTSDKEQDKQKQQDRTSD 632
Query: 126 RGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERS 185
+D+ ++++D D+++ K K+++R + Q ++ R+ E+++ + +++R+
Sbjct: 633 NEQDK-QKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDRTQDKEQDKQK-----QQDRT 686
Query: 186 RDREVIERERSRDR-------EVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQV 238
D+E ++++ +DR + +++R++D+E +++++ + DN+++ ++ +++ +
Sbjct: 687 SDKEQ-DKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDRTQDK 745
Query: 239 EPEVDPERD 247
E ++D
Sbjct: 746 EQNKQKQQD 754
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 93/163 (57%), Gaps = 6/163 (3%)
Query: 88 RDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRE-RDHDTDRDREKD 146
R +DR + + + +R +D++++++ +DR D+ +D+ +++ R D ++D++K
Sbjct: 539 RQKSQDRTQDKQQDKQNQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQ 598
Query: 147 KEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREV-IERE 205
+E+ ++K Q +R ++++ +DR + E+ + + +++R++D+E +++
Sbjct: 599 QERTQDKEQNKQKQQDRTSDKEQDKQKQQDR-TSDNEQDKQK---QQDRTQDKEQNKQKQ 654
Query: 206 RSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEVDPERDQ 248
+ R + ++ +++++ R DKE + K++ + E D ++ Q
Sbjct: 655 QDRTSDNEQDKQQQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQ 697
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 42 SKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRS-SWE 100
SK K ++ E + +SRG + R R+H + ERD S R+WSR+ RD R+ WE
Sbjct: 2384 SKEKPLDEPETQASENRQSRGFEERRRDRDHSKPWERDRS--RNWSREKERDWERNRDWE 2441
Query: 101 -HRDRDTERDRDRDREERNGRDRNRDRGRDRD 131
HR++DT R+ D+++E +D+ R+ R++D
Sbjct: 2442 RHREKDTNREWDKNKERNPNKDKERESERNKD 2473
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 30/191 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V +F++ +++ K +VE
Sbjct: 211 RHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRS 270
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASGGG 344
V A+AL G G PV V+ PS+ NL + + G++GG
Sbjct: 271 VEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGGL 330
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 331 EGP-----DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 385
Query: 404 ---EDARNALN 411
+ A ALN
Sbjct: 386 NVTDIACAALN 396
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 561 EEFDMDIKEDVEGECSKFGKLKHIFVEK-DSAGF-------VYLRFENTQSAFAAQRALH 612
EE++ DI ED+ E K+G L + + + D +G V+L + + A A+ A+H
Sbjct: 464 EEYE-DIMEDMRLESGKYGNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMH 522
Query: 613 GRWFAGKMITATF 625
GR F G + A F
Sbjct: 523 GRKFGGNPVVAVF 535
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|108864649|gb|ABA95281.2| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 30/191 (15%)
Query: 246 RDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRL------IMDRNSRRSKGVGYVEFYD 299
R R V+ + A+E+ V +F++ +++ K +VE
Sbjct: 211 RHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRS 270
Query: 300 VMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSNSSIAGASGGG 344
V A+AL G G PV V+ PS+ NL + + G++GG
Sbjct: 271 VEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGGL 330
Query: 345 TGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 331 EGP-----DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 385
Query: 404 ---EDARNALN 411
+ A ALN
Sbjct: 386 NVTDIACAALN 396
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 561 EEFDMDIKEDVEGECSKFGKLKHIFVEK-DSAGF-------VYLRFENTQSAFAAQRALH 612
EE++ DI ED+ E K+G L + + + D +G V+L + + A A+ A+H
Sbjct: 464 EEYE-DIMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMH 522
Query: 613 GRWFAGKMITATF 625
GR F G + A F
Sbjct: 523 GRKFGGNPVVAVF 535
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 41 SSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRS-SW 99
S+K KS ++ E + + RG + R R+H + ERD R+WSRD RD R+ W
Sbjct: 2164 STKEKSSDEPESQLSENRQGRGFEDRRRDRDHAKPWERDRG--RNWSRDRERDWDRNRDW 2221
Query: 100 E-HRDRDTERDRDRDREERNGRDRNRDRGRDRD 131
E HR++D+ RD D+++E RD++R+ R+++
Sbjct: 2222 ERHREKDSNRDWDKNKERNPNRDKDRESERNKE 2254
>gi|328865125|gb|EGG13511.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 662
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLN 413
+Y+ +L + TE QL F FG ++ +++ +E G KG+ FV+ + E A A
Sbjct: 139 VYISSLDWWTTEQQLETFFAEFGKLKTLKIFENELNGKSKGYAFVELSSNEQALQAKEKL 198
Query: 414 GQLEIVGRAIKVSAVTDQSGLQDLGANTTGDF 445
+I GR + + AV+ QS + A +G F
Sbjct: 199 SDKQINGREVTIKAVSQQSYQHVINAIKSGSF 230
>gi|221502126|gb|EEE27870.1| glycine-rich RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 763
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL---------DETGHCKGFGFVQFAR 402
A RL+VG L +N + + ++F P G + V LP ++ +G F++FA
Sbjct: 336 ATRLFVGGLAYNTSRYDICELFGPVGPIVDVSLPQIDRAIPNDSEDAFAVRGIAFIEFAD 395
Query: 403 LEDARNALNLNGQLEIVGRAIKVS 426
+DAR AL L+G+ + GR I V+
Sbjct: 396 RKDARTALELSGR-HLCGRPITVN 418
>gi|237839061|ref|XP_002368828.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211966492|gb|EEB01688.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 754
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPL---------DETGHCKGFGFVQFAR 402
A RL+VG L +N + + ++F P G + V LP ++ +G F++FA
Sbjct: 336 ATRLFVGGLAYNTSRYDICELFGPVGPIVDVSLPQIDRAIPNDSEDAFAVRGIAFIEFAD 395
Query: 403 LEDARNALNLNGQLEIVGRAIKVS 426
+DAR AL L+G+ + GR I V+
Sbjct: 396 RKDARTALELSGR-HLCGRPITVN 418
>gi|225462520|ref|XP_002264268.1| PREDICTED: uncharacterized protein LOC100266959 [Vitis vinifera]
Length = 902
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 48/209 (22%)
Query: 61 RGSKSRDESRNHDRRKERDSSC---HRSWSRDGGRDRPRSSWE-HRDRDTERDRDR-DRE 115
+ SK R + R RR+E+D RS + DG ++R + + + +DR T R+R + DR+
Sbjct: 42 KSSKHRSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKEDRD 101
Query: 116 ERNGRDRNRDRGRDRDR-------RERDHDTDR-------------------DREKDKEK 149
ER +DRNRD+ R++D +ER+ D DR DR +DKE+
Sbjct: 102 ERE-KDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKER 160
Query: 150 EREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVI-ERERSRDREVIERERSR 208
+EK+ + E+ R +R + RDRE E+E+S+DRE E ++ RDR+ I++E+ +
Sbjct: 161 GKEKNRDRDKEREKER----DRTKDRDREK-EKEKSKDREKERENDKDRDRDAIDKEKGK 215
Query: 209 DRELKEREKERES-------RDNDKESRR 230
+R R+KERE+ +D DK SR+
Sbjct: 216 ER---IRDKEREADQDRDRYKDRDKGSRK 241
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 43/209 (20%)
Query: 73 DRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRD-REERNGRDRNRDRGRDRD 131
D ++RD S R + D + E + +DR + REE++ R ++R+R + D
Sbjct: 14 DELRDRDDSPTRDYHDGAYDDLEENGIEKSSKHRSKDRKKSRREEKDHRGKDRERSKAGD 73
Query: 132 -RRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREV 190
+ER+ +T KD EK+R S ER + DRDERE+ R+R+ + RE+ DRE
Sbjct: 74 GLKEREKET-----KDSEKDRVTSR------ERRKEDRDEREKDRNRDKV-REKDYDREK 121
Query: 191 I-ERERSRDREVIER--------------------------ERSRDRELKEREKERE-SR 222
++ER RD++ +R E++RDR+ KEREKER+ ++
Sbjct: 122 YRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGKEKNRDRD-KEREKERDRTK 180
Query: 223 DNDKESRRPKEKKEQVEPEVDPERDQRTV 251
D D+E + K K + E E D +RD+ +
Sbjct: 181 DRDREKEKEKSKDREKERENDKDRDRDAI 209
>gi|296090475|emb|CBI40671.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 48/209 (22%)
Query: 61 RGSKSRDESRNHDRRKERDSSC---HRSWSRDGGRDRPRSSWE-HRDRDTERDRDR-DRE 115
+ SK R + R RR+E+D RS + DG ++R + + + +DR T R+R + DR+
Sbjct: 42 KSSKHRSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKEDRD 101
Query: 116 ERNGRDRNRDRGRDRDR-------RERDHDTDR-------------------DREKDKEK 149
ER +DRNRD+ R++D +ER+ D DR DR +DKE+
Sbjct: 102 ERE-KDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKER 160
Query: 150 EREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVI-ERERSRDREVIERERSR 208
+EK+ + E+ R +R + RDRE E+E+S+DRE E ++ RDR+ I++E+ +
Sbjct: 161 GKEKNRDRDKEREKER----DRTKDRDREK-EKEKSKDREKERENDKDRDRDAIDKEKGK 215
Query: 209 DRELKEREKERES-------RDNDKESRR 230
+R R+KERE+ +D DK SR+
Sbjct: 216 ER---IRDKEREADQDRDRYKDRDKGSRK 241
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 94/158 (59%), Gaps = 20/158 (12%)
Query: 70 RNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRD 129
+++DR K RD R R +DR + R+R+ +++ DR R++ G+++NRDR ++
Sbjct: 115 KDYDREKYRDKERERDKDR---KDRGKEKEREREREVDKESDRGRDKERGKEKNRDRDKE 171
Query: 130 RDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDRE 189
R+ +ERD DRDREK+KEK +++ + ER E ++ RDR+ I++E+ ++R
Sbjct: 172 RE-KERDRTKDRDREKEKEKSKDR------EKER------ENDKDRDRDAIDKEKGKER- 217
Query: 190 VIERERSRDREVIERERSRDRELKEREKERESRDNDKE 227
+ ++ER D+ +R+R +DR+ R+ E D K+
Sbjct: 218 IRDKEREADQ---DRDRYKDRDKGSRKNRDEGHDRSKD 252
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 43/209 (20%)
Query: 73 DRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRD-REERNGRDRNRDRGRDRD 131
D ++RD S R + D + E + +DR + REE++ R ++R+R + D
Sbjct: 14 DELRDRDDSPTRDYHDGAYDDLEENGIEKSSKHRSKDRKKSRREEKDHRGKDRERSKAGD 73
Query: 132 -RRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREV 190
+ER+ +T KD EK+R S ER + DRDERE+ R+R+ + RE+ DRE
Sbjct: 74 GLKEREKET-----KDSEKDRVTSR------ERRKEDRDEREKDRNRDKV-REKDYDREK 121
Query: 191 I-ERERSRDREVIER--------------------------ERSRDRELKEREKERE-SR 222
++ER RD++ +R E++RDR+ KEREKER+ ++
Sbjct: 122 YRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGKEKNRDRD-KEREKERDRTK 180
Query: 223 DNDKESRRPKEKKEQVEPEVDPERDQRTV 251
D D+E + K K + E E D +RD+ +
Sbjct: 181 DRDREKEKEKSKDREKERENDKDRDRDAI 209
>gi|327263062|ref|XP_003216340.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Anolis carolinensis]
Length = 626
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+P G V+ V++ DET + F FV+FA AL
Sbjct: 181 RTVYVGNLNSQTTTADQLLEFFKPVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 239
Query: 412 LNG 414
NG
Sbjct: 240 FNG 242
>gi|357477847|ref|XP_003609209.1| Glycine-rich RNA-binding protein-like protein [Medicago truncatula]
gi|355510264|gb|AES91406.1| Glycine-rich RNA-binding protein-like protein [Medicago truncatula]
Length = 555
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN-LN 413
+YVG L + T++ +R VF +G + V++ D+ K + FV F A +A+N +N
Sbjct: 9 IYVGGLPYGATDETIRTVFNLYGAILDVKIINDQRTIGKCYCFVTFTNPRSAIDAINDMN 68
Query: 414 GQLEIVGRAIKVSAVTDQSG 433
G+ I GR +KV+ V + G
Sbjct: 69 GRT-INGRVVKVNGVKSRGG 87
>gi|195375174|ref|XP_002046378.1| GJ12538 [Drosophila virilis]
gi|194153536|gb|EDW68720.1| GJ12538 [Drosophila virilis]
Length = 1083
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 34/208 (16%)
Query: 19 AKEKETANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKER 78
+KE++ + G KS+DR RS+ + KS++ R+ +R KER
Sbjct: 437 SKERQRSLGKERQKSKDRARSKERQ--------------------KSKERQRSKERPKER 476
Query: 79 DSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHD 138
S R S++ R + R + R R E+ R +DR R R+ +R R ++ R+R +
Sbjct: 477 QRSKERPRSKERQRSKERLRSKERLRSKEKPRSKDRHRSKERQRSVERPRSKE-RQRSKE 535
Query: 139 TDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDRE---VIER--ERSRDREVIER 193
R +E+ + KER++S ER RS ++ERS +R+ V ER ER R +E ++R
Sbjct: 536 RLRSKERVRSKERQRSK------ERVRSKERQKERSAERQRSKVKERSKERQRSKERVQR 589
Query: 194 ERSRDREVIERERSRDREL-KEREKERE 220
+ R R ER RS+DR+ KER+K +E
Sbjct: 590 SKERQR-SKERLRSKDRQRSKERQKSKE 616
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 101/184 (54%), Gaps = 15/184 (8%)
Query: 62 GSKSRDESRNHDRRKERDSSCHRSWS----RDGGRDRPRSSWEHRDRDTERDRDRDREER 117
GSK R R+ +RR ER S R S R +DR RS + ++ +R ++R +E +
Sbjct: 420 GSKERK--RSKERRSERQRSKERQRSLGKERQKSKDRARSKERQKSKERQRSKERPKERQ 477
Query: 118 NGRDRNRDRGRDRDR-RERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDER--ERS 174
++R R + R R + R R + R +EK + K+R +S ER RS +R ER
Sbjct: 478 RSKERPRSKERQRSKERLRSKERLRSKEKPRSKDRHRSKERQRSVERPRSKERQRSKERL 537
Query: 175 RDREVI---ERERSRDREVIERERSRDREVIERERSRDREL-KEREKERESRDNDKESRR 230
R +E + ER+RS++R V +ER ++R ER+RS+ +E KER++ +E KE +R
Sbjct: 538 RSKERVRSKERQRSKER-VRSKERQKERSA-ERQRSKVKERSKERQRSKERVQRSKERQR 595
Query: 231 PKEK 234
KE+
Sbjct: 596 SKER 599
>gi|170056240|ref|XP_001863941.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876010|gb|EDS39393.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 643
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 20/164 (12%)
Query: 73 DRRKER--DSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDR 130
DR+ ER D R R R + R + +DR TER +DR E + +DR +R +DR
Sbjct: 407 DRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKTERQ--KDRKPERQKDR 464
Query: 131 DRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREV 190
+ ER D +R+KD++ ER+K ++ Q +R E ER +DR+ ER +DR+
Sbjct: 465 -KTERQKDRKTERQKDRKTERQKDRKTERQKDR------ETERQKDRKT---ERQKDRKT 514
Query: 191 IERERSRDREVIERERSRDRELK--EREKERESRDNDKESRRPK 232
ER +DR+ ER+++ DR K +R ++ E R E RR K
Sbjct: 515 ---ERQKDRKT-ERQKTEDRRQKTEDRRQKTEDRRQKTEDRRQK 554
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 15/186 (8%)
Query: 64 KSRDESRNHDRRKER--DSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRD 121
K R R DR+ ER D R R R + R +DR TER +DR E + +D
Sbjct: 422 KDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKPERQKDRKTERQKDRKTERQ--KD 479
Query: 122 RNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIE 181
R +R +DR + ER D + +R+KD++ ER+K ++ Q +R +++R + E R +
Sbjct: 480 RKTERQKDR-KTERQKDRETERQKDRKTERQKDRKTERQKDR-KTERQKTEDRRQKTEDR 537
Query: 182 RERSRDREVIERERSRDREVIERERSRDRELK-EREKERESRDNDKESRRPKEKKEQVEP 240
R+++ DR R+++ DR R+++ DR K E +++ R D E+ R K++K ++
Sbjct: 538 RQKTEDR----RQKTEDR----RQKTEDRRQKTEDRRQKTERQKDTETERQKDRKTGIQK 589
Query: 241 EVDPER 246
+ ER
Sbjct: 590 DRKTER 595
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 25/231 (10%)
Query: 35 DRVRSRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKER--DSSCHRSWSRDGGR 92
+R + R ++ + D K E D ++ K R R DR+ ER D R R R
Sbjct: 411 ERQKDRKTERQKDRKTERQKD--RKTERQKDRKTERQKDRKTERQKDRKPERQKDRKTER 468
Query: 93 DRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKERE 152
+ R + +DR TER +DR E + +DR +R +DR + ER D +R+KD++ ER+
Sbjct: 469 QKDRKTERQKDRKTERQKDRKTERQ--KDRETERQKDR-KTERQKDRKTERQKDRKTERQ 525
Query: 153 KSH-RSGSQSERYRSDRDERERSRDREVI---ERERSRDREV-------IERERSRDREV 201
K+ R +R + D R+++ DR R+++ DR E ER +DR+
Sbjct: 526 KTEDRRQKTEDRRQKTEDRRQKTEDRRQKTEDRRQKTEDRRQKTERQKDTETERQKDRKT 585
Query: 202 -IER----ERSRDRELKEREKERES-RDNDKESRRPKEKKEQVEPEVDPER 246
I++ ER +DR+ ER+K+R++ R D+++ R K +K + E P+R
Sbjct: 586 GIQKDRKTERQKDRKT-ERQKDRKTERQKDRKTERQKNRKTERLKERKPKR 635
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 343 GGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFA 401
G P G L V NL + T + L++VFE +G V V +P T +GF FV+F
Sbjct: 4 GRAPPQIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVRFY 63
Query: 402 RLEDARNALN-LNGQLEIVGRAIKV 425
D +A++ L+G + + GR ++V
Sbjct: 64 DKRDCEDAMDSLDGYI-LDGRELRV 87
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 347 PYSGG--ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARL 403
P +GG + L+V ++++ TE +LR+ FE +G + V + D TG +G+ FV+F R
Sbjct: 96 PNAGGDAFKTLFVSRINYDTTESKLRREFETYGKIRKVTIVKDVATGKPRGYAFVEFDRE 155
Query: 404 EDARNALNLNGQLEIVGRAIKV 425
D A +I GR + V
Sbjct: 156 RDMHTAYKSADGKKIDGRRVLV 177
>gi|390368097|ref|XP_781203.3| PREDICTED: uncharacterized protein LOC575726 [Strongylocentrotus
purpuratus]
Length = 500
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 349 SGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDAR 407
S + L++ ++++ TE +LR+ FE +G ++++ + D TG KG+ F+++A D
Sbjct: 98 SNAFKTLFIARVNYDTTESKLRREFESYGPIKMISIAHDINTGKPKGYAFIEYAHERDMH 157
Query: 408 NALNLNGQLEIVGRAIKV 425
+A +I R + V
Sbjct: 158 SAYKYADGKKIDSRRVLV 175
>gi|194747085|ref|XP_001955983.1| GF24975 [Drosophila ananassae]
gi|190623265|gb|EDV38789.1| GF24975 [Drosophila ananassae]
Length = 1051
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 119/199 (59%), Gaps = 15/199 (7%)
Query: 32 KSEDRVRSRSSKCKSDEK--VEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRD 89
+S+DR RSR D+K VE D R SK R++ R+ + ER SS RS +D
Sbjct: 433 RSKDRQRSREKHRSKDKKQSVEKKRDRSKDRRRSKEREQKRSVGKEPER-SSRRRSIEKD 491
Query: 90 GGRDRPRSSWEHRDR--DTERDRDRDREERNGRDRNRDRGRDRDR-RERDHDTDRDREKD 146
G DR +S + RDR E++R R+R++ R+R+R R +++R R+R + +RDR++
Sbjct: 492 G--DRKKSVEKERDRKGSVEKER-RERKKSPERERDRKRSVEKERGRKRSPEKERDRKRS 548
Query: 147 KEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVI-ERE 205
EKER++ + + +R RS ERE+ + R +ER R +E I+R RS+DR+ +R
Sbjct: 549 PEKERDRKRSAEKERDRKRSAEKEREKPKVRPA-SKERHRSKE-IKRRRSKDRQSSNDRR 606
Query: 206 RSRDRELKEREKERESRDN 224
RS+DR+L KER+++D+
Sbjct: 607 RSKDRQL---SKERQAKDS 622
>gi|307187162|gb|EFN72405.1| Death-inducer obliterator 1 [Camponotus floridanus]
Length = 2322
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 75/149 (50%), Gaps = 25/149 (16%)
Query: 34 EDRVRSRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRD 93
EDR+RSR D +S+G DE R D+ + R+ +S S+D
Sbjct: 1484 EDRLRSRM--------------DAKKSKG---MDERRRKDKERGRERDGVKSKSKDRRER 1526
Query: 94 RPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEK-ERE 152
RDRD + RD+ +E ++ RN++ RD+DR ER+ D DRDR KD++K R+
Sbjct: 1527 SHSRHRRSRDRDRSKTRDKSKERKS---RNKESRRDKDR-EREKDKDRDRNKDRDKTSRK 1582
Query: 153 KSHRSGSQSERYR---SDRDERERSRDRE 178
+S G Q E+ R SD R RS RE
Sbjct: 1583 ESRERGRQKEKDRHKSSDSWMRNRSESRE 1611
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 244 PERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
PE D T+F I ADE + E F+ G + VRL D S R KG GYV+F +
Sbjct: 348 PESD--TLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEA 405
Query: 304 PMAI-ALSGQPLLG 316
A +L+G L G
Sbjct: 406 RSAFESLNGSELAG 419
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 244 PERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSV 303
PE D T+F I ADE + E F+ G + VRL D S R KG GYV+F +
Sbjct: 348 PESD--TLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEA 405
Query: 304 PMAI-ALSGQPLLG 316
A +L+G L G
Sbjct: 406 RSAFESLNGSELAG 419
>gi|336272730|ref|XP_003351121.1| hypothetical protein SMAC_06000 [Sordaria macrospora k-hell]
gi|380093684|emb|CCC08648.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 439
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
+Y G L ++++E + +F FG ++L D ETG KGFG++++ A++
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 414 GQLEIVGRAIKV 425
G EI GR I+V
Sbjct: 95 GGAEIGGRLIRV 106
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 238 VEPEVDPERDQR-TVFAYQICLKAD--ERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGY 294
+ PE D R T F Y L D E DV FS+ G+ ++L+ D+ + +SKG G+
Sbjct: 19 IPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGW 78
Query: 295 VEFYDVMSVPMAI-ALSGQPLLGQPVMV 321
+++ D S +A+ L G + G+ + V
Sbjct: 79 LKYEDQRSTDLAVDNLGGAEIGGRLIRV 106
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 42 SKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRS-SWE 100
+K KS ++ E + + RG + R R+H + ERD R+WSRD RD R+ WE
Sbjct: 2164 TKEKSSDEPETQLSENRQGRGFEDRRRDRDHGKPWERDRG--RNWSRDRERDWDRNRDWE 2221
Query: 101 -HRDRDTERDRDRDREERNGRDRNRDRGRDRD 131
HR++D+ RD D+++E RD+ R+ R+++
Sbjct: 2222 RHREKDSNRDWDKNKERNPNRDKERESERNKE 2253
>gi|302675531|ref|XP_003027449.1| hypothetical protein SCHCODRAFT_86032 [Schizophyllum commune H4-8]
gi|300101136|gb|EFI92546.1| hypothetical protein SCHCODRAFT_86032 [Schizophyllum commune H4-8]
Length = 559
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 74/208 (35%), Gaps = 50/208 (24%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-AL 309
V+ + RD+ EF AG+V +++ SKG G VEF ++ L
Sbjct: 184 VYVGNLSYDVRYRDLMEFMRGAGEVLFAEVLVTPTGV-SKGCGIVEFASPEDAQRSVREL 242
Query: 310 SGQPLLGQPVMVK--------------------------------PSEAEKNLVQSNSSI 337
S Q LLG+PV ++ P N N
Sbjct: 243 SEQSLLGRPVFIREDRENESRFGATPVPGKMGMAMAGQGMNAGPPPRPPAHNHAAGNP-- 300
Query: 338 AGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGF 397
+LYVGNL + L+ +F G++ + + G KG G
Sbjct: 301 --------------GNQLYVGNLPYQAGWQDLKDLFRTAGSIVRADINIGMDGRPKGSGT 346
Query: 398 VQFARLEDARNALNLNGQLEIVGRAIKV 425
V F +DA+ A+ + + GR ++V
Sbjct: 347 VVFETAKDAQQAIQMYNGFDWYGRVLEV 374
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
++++ V NL ++ + L ++FE GTVEL ++ D T KG G VQFA + +A A+
Sbjct: 462 SQQIMVRNLPWSTANEDLVELFETTGTVELAEILFDGT-RSKGCGVVQFAAVPEAETAIA 520
Query: 412 LNGQLEIVGRAIKV 425
Q GR + V
Sbjct: 521 KFQQYMYGGRPLDV 534
>gi|195344820|ref|XP_002038977.1| GM17089 [Drosophila sechellia]
gi|194134107|gb|EDW55623.1| GM17089 [Drosophila sechellia]
Length = 1325
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 28/194 (14%)
Query: 49 KVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGG-----RDRPRSSWEHRD 103
K +D D+ GSK+R +S + +R+ RD+S R +R+ R+R SS+E R+
Sbjct: 1116 KSQDSDEFNLEGPGSKNRFQSNGNGQRR-RDNSTGRDRNRENSSYDRERNRENSSYE-RE 1173
Query: 104 RDTERDRDRDREERNG----RDRNRDRGRDRDRRE-RDHDTDRDREKDKEKEREKSHRSG 158
R+ E D++R+ RN R + RDR R +R R++ R+R + + EK R G
Sbjct: 1174 RNRESSYDKERKNRNAVANDRQQKRDRSRSYERPPIRENSAPRERRVESSRS-EKDSRRG 1232
Query: 159 SQSERY-------RSDRDER----ERSRDREVIERERSRDREVIERERSRDREVIERERS 207
+S R RSDR ER ERS E ER DR ++ER+R + ERER
Sbjct: 1233 DRSSRNEKSDRGERSDRGERSDRGERSDRGERSERGERSDRGDRDKERNRAK---ERERD 1289
Query: 208 RDRELK-EREKERE 220
RDR+LK +RE++RE
Sbjct: 1290 RDRDLKGQRERKRE 1303
>gi|298713809|emb|CBJ27181.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1141
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 543 PSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFV-------EKDSAGFVY 595
P+ + L NM + + + +IK DV EC ++GK+K V E G ++
Sbjct: 950 PTCVVRLSNMVEVEELADDTEYAEIKGDVVEECEQYGKVKSAEVPRPEDGKEVLGLGEIF 1009
Query: 596 LRFENTQSAFAAQRALHGRWFAGKMITATF 625
+ FE+ A + AL GR F GK + AT+
Sbjct: 1010 VEFEDVAGATKGRNALAGRKFGGKAVKATY 1039
>gi|27369842|ref|NP_766180.1| splicing regulatory glutamine/lysine-rich protein 1 [Mus musculus]
gi|37537951|sp|Q8BZX4.1|SREK1_MOUSE RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|26329009|dbj|BAC28243.1| unnamed protein product [Mus musculus]
gi|47682645|gb|AAH70460.1| Splicing factor, arginine/serine-rich 12 [Mus musculus]
Length = 494
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 127
Query: 412 LNGQL 416
NG +
Sbjct: 128 FNGVM 132
>gi|449278700|gb|EMC86491.1| Splicing factor, arginine/serine-rich 12 [Columba livia]
Length = 517
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|195579882|ref|XP_002079788.1| GD21833 [Drosophila simulans]
gi|194191797|gb|EDX05373.1| GD21833 [Drosophila simulans]
Length = 1323
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 102/196 (52%), Gaps = 26/196 (13%)
Query: 49 KVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGG-----RDRPRSSWEHRD 103
K +D D+ GSK+R +S + +R+ RD+S R +R+ R R SS++ R+
Sbjct: 1114 KSQDSDEFNLEGPGSKNRFQSNGNGQRR-RDNSTGRERNRENSSYDRERKRENSSYD-RE 1171
Query: 104 RDTERDRDRDREERNGRDRNRDRGRDRDR---RERDHDTDRDREKDKEKER-EKSHRSGS 159
R+ E D++R+ RN +R R RDR R R + RE+ E R EK R G
Sbjct: 1172 RNRESSYDKERKNRNALANDRQRKRDRSRSYERPPIRENSAPRERRVESSRSEKDSRRGE 1231
Query: 160 QSERY-------RSDRDER----ERSRDREVIERERSRDREVIERERSRDREVIERERSR 208
+S R RSDR ER ERS E +R DR ++ER+R +E RER R
Sbjct: 1232 RSSRNEKSDRGERSDRGERSDRGERSDRGEKSDRGERSDRGDRDKERNRAKE---RERDR 1288
Query: 209 DRELK-EREKERESRD 223
DR+LK +RE++RE D
Sbjct: 1289 DRDLKGQRERKRERDD 1304
>gi|68448493|ref|NP_001020337.1| RNA-binding motif protein, X-linked 2 [Danio rerio]
gi|67678309|gb|AAH96985.1| RNA binding motif protein, X-linked 2 [Danio rerio]
Length = 434
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL--- 410
+++G + +TE + VF +G + + L D +TG KGF F+ + ED R+ +
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCY---EDQRSTILAV 94
Query: 411 -NLNGQLEIVGRAIKVSAVTD 430
N NG ++I GR I+V V +
Sbjct: 95 DNFNG-IKIKGRTIRVDHVAN 114
>gi|148686563|gb|EDL18510.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Mus
musculus]
Length = 519
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 94 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 152
Query: 412 LNGQL 416
NG +
Sbjct: 153 FNGVM 157
>gi|322791721|gb|EFZ15997.1| hypothetical protein SINV_11524 [Solenopsis invicta]
Length = 4232
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDAR 407
+ R L++GNL ++T +LR+ FEPFG E++++ + + G + F Q++ +
Sbjct: 358 HPKATRTLFIGNLEKDVTASELRKHFEPFG--EIIEIDIKKQGAVSSYAFCQYSDIGSVV 415
Query: 408 NAL 410
A+
Sbjct: 416 KAM 418
>gi|332028066|gb|EGI68117.1| Protein split ends [Acromyrmex echinatior]
Length = 4415
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDAR 407
+ R L++GNL ++T +LR+ FEPFG E++++ + + G + F Q++ +
Sbjct: 459 HPKATRTLFIGNLEKDVTASELRKHFEPFG--EIIEIDIKKQGAVSSYAFCQYSDIGSVV 516
Query: 408 NAL 410
A+
Sbjct: 517 KAM 519
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLN 413
L+V L++ TE ++++ FE +G ++ V+L D+ TG KG+ F+++ D + A
Sbjct: 140 LFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQA 199
Query: 414 GQLEIVGRAIKV 425
+I GR + V
Sbjct: 200 DGRKIDGRRVLV 211
>gi|149059244|gb|EDM10251.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Rattus
norvegicus]
Length = 494
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 127
Query: 412 LNGQL 416
NG +
Sbjct: 128 FNGVM 132
>gi|9910564|ref|NP_064477.1| splicing regulatory glutamine/lysine-rich protein 1 [Rattus
norvegicus]
gi|37537914|sp|Q9JKL7.1|SREK1_RAT RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=SR-related protein of 86 kDa; AltName:
Full=Serine/arginine-rich-splicing regulatory protein
86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|7158880|gb|AAF37578.1|AF234765_1 serine-arginine-rich splicing regulatory protein SRRP86 [Rattus
norvegicus]
Length = 494
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 127
Query: 412 LNGQL 416
NG +
Sbjct: 128 FNGVM 132
>gi|307200599|gb|EFN80740.1| Protein split ends [Harpegnathos saltator]
Length = 4415
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 348 YSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDAR 407
+ R L++GNL ++T +LR+ FEPFG E++++ + + G + F Q++ +
Sbjct: 377 HPKATRTLFIGNLEKDVTASELRKHFEPFG--EIIEIDIKKQGAVSSYAFCQYSDIGSVV 434
Query: 408 NAL 410
A+
Sbjct: 435 KAM 437
>gi|158289428|ref|XP_001687752.1| AGAP000003-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 80/124 (64%), Gaps = 17/124 (13%)
Query: 101 HRDRDTERDRDRDREERNGRDRNRDRGRDRD-RRERDHDTDR--DREKDKEKEREKSHRS 157
H+D +TER RDR+ E RDR +R RDR+ R+RD +T+R DRE +++++RE +
Sbjct: 89 HQDGETERQRDRETE--RQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQR 146
Query: 158 GSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREK 217
++ER R DR E ER RDRE ER RDRE ER RDRE ER RDRE ER++
Sbjct: 147 DRETERQR-DR-ETERQRDRET---ERQRDRET---ERQRDRET---ERQRDRET-ERQR 194
Query: 218 ERES 221
+RE+
Sbjct: 195 DRET 198
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 75/122 (61%), Gaps = 20/122 (16%)
Query: 92 RDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRD-RRERDHDTDRDREKDKEKE 150
R R R + RDR+TER RDR+ E RDR +R RDR+ R+RD +T+R R+++ E++
Sbjct: 96 RQRDRETERQRDRETERQRDRETE--RQRDRETERQRDRETERQRDRETERQRDRETERQ 153
Query: 151 REKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDR 210
R++ ++ER R DR E ER RDRE ER RDRE ER RDRE ER RDR
Sbjct: 154 RDR------ETERQR-DR-ETERQRDRET---ERQRDRET---ERQRDRET---ERQRDR 196
Query: 211 EL 212
E
Sbjct: 197 ET 198
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 22/116 (18%)
Query: 76 KERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRD-RRE 134
++RD R R+ R R R + RDR+TER RDR+ E RDR +R RDR+ R+
Sbjct: 104 RQRDRETERQRDRETERQRDRETERQRDRETERQRDRETE--RQRDRETERQRDRETERQ 161
Query: 135 RDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREV 190
RD +T+R R+++ E++R++ E ER RDRE ER RDRE
Sbjct: 162 RDRETERQRDRETERQRDR----------------ETERQRDRET---ERQRDRET 198
>gi|402222407|gb|EJU02474.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 554
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 354 RLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLN 413
RLYVGNL ++ T L + G V ++ + TG KG G V++A +DA+ A+
Sbjct: 141 RLYVGNLSYDCTYRDLLEFMRGAGEVLFAEVLVTPTGVSKGCGIVEYANSDDAQKAIREL 200
Query: 414 GQLEIVGRAIKV 425
G ++GR I +
Sbjct: 201 GDQPLLGRPIFI 212
>gi|148686566|gb|EDL18513.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Mus
musculus]
Length = 626
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 201 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 259
Query: 412 LNGQL 416
NG +
Sbjct: 260 FNGVM 264
>gi|291239418|ref|XP_002739620.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2-like,
partial [Saccoglossus kowalevskii]
Length = 641
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 80/170 (47%), Gaps = 28/170 (16%)
Query: 57 GHRSRGSKSRDESRNHDRRKERDSSCH-RSWSRDGGRDRPRSSWEHRDRDTERDRDR--- 112
GHR R K R SR DR RD S R SRDG DR RS RDR R RDR
Sbjct: 339 GHRDRIDKGRSNSRGRDRSCSRDRSDRGRGHSRDGS-DRGRSHSRGRDRRHSRGRDRSHS 397
Query: 113 ---DREERNGRDRNRDRG------RDRDR---RERDHDTDRDREKDKEKEREKSHRSGSQ 160
DR GR R+ +G RD+DR R+R H RDR K + R S GS+
Sbjct: 398 KGGDRNHSKGRGRSHSKGRGRSHSRDKDRSPSRDRSHSRGRDRSHSKGRGRSHSRDRGSK 457
Query: 161 SERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDR 210
R R +R SRDR R RDR RERS+DR +SRDR
Sbjct: 458 HSRGR----DRSPSRDR---SHSRGRDRN-HSRERSKDR---SHSKSRDR 496
>gi|410948711|ref|XP_003981074.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Felis catus]
Length = 510
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|410948713|ref|XP_003981075.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Felis catus]
Length = 509
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|441658628|ref|XP_004091274.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 509
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|426384534|ref|XP_004058817.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Gorilla gorilla gorilla]
Length = 509
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|395455051|ref|NP_001257421.1| splicing regulatory glutamine/lysine-rich protein 1 isoform c [Homo
sapiens]
Length = 507
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 341 SGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQ 399
S G P G L V NL + T + L++VFE +G V V +P T +GF FV+
Sbjct: 2 SYGRAPPTIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVR 61
Query: 400 FARLEDARNALN-LNGQLEIVGRAIKV 425
F D +A++ L+G + + GR ++V
Sbjct: 62 FYDKRDCEDAMDALDGYM-MDGRELRV 87
>gi|354474059|ref|XP_003499249.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cricetulus griseus]
gi|344246968|gb|EGW03072.1| Splicing factor, arginine/serine-rich 12 [Cricetulus griseus]
Length = 611
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 243
Query: 412 LNGQL 416
NG +
Sbjct: 244 FNGVM 248
>gi|338718814|ref|XP_003363893.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Equus caballus]
Length = 512
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|67968786|dbj|BAE00750.1| unnamed protein product [Macaca fascicularis]
Length = 510
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|426246385|ref|XP_004016975.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Ovis aries]
Length = 515
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|74140797|dbj|BAC29709.2| unnamed protein product [Mus musculus]
Length = 401
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 127
Query: 412 LNGQL 416
NG +
Sbjct: 128 FNGVM 132
>gi|426384530|ref|XP_004058815.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Gorilla gorilla gorilla]
gi|426384532|ref|XP_004058816.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Gorilla gorilla gorilla]
Length = 510
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|39645085|gb|AAH63761.1| Sfrs12 protein, partial [Mus musculus]
Length = 407
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 127
Query: 412 LNGQL 416
NG +
Sbjct: 128 FNGVM 132
>gi|21040255|ref|NP_631907.1| splicing regulatory glutamine/lysine-rich protein 1 isoform b [Homo
sapiens]
gi|37537968|sp|Q8WXA9.1|SREK1_HUMAN RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12; AltName: Full=Splicing
regulatory protein 508; Short=SRrp508
gi|18307966|gb|AAL67778.1|AF459094_1 splicing factor, arginine/serine-rich 12 [Homo sapiens]
gi|85662678|gb|AAI12344.1| SFRS12 protein [Homo sapiens]
gi|119571715|gb|EAW51330.1| splicing factor, arginine/serine-rich 12, isoform CRA_c [Homo
sapiens]
gi|127801393|gb|AAH67770.1| Splicing factor, arginine/serine-rich 12 [Homo sapiens]
Length = 508
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|114599978|ref|XP_001162417.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Pan troglodytes]
Length = 510
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 66 RDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREE----RNGRD 121
RD RN +R +ER+ + R+ R S + + R+ ERD+ RD+ + R+ RD
Sbjct: 16 RDRDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDKRDKERTRSSRD 75
Query: 122 RNRDRGRDRDR-----RERDHDTDRDREKDKEKEREK 153
RDR R+R + R+RDH+ RD E++KE+ER+K
Sbjct: 76 DERDRARERTKDREKERDRDHEG-RDAEREKERERDK 111
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 24/111 (21%)
Query: 101 HRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQ 160
HRDRD +R R+RE RD+ + R+ R ER+ +D +K +EKER+K HR
Sbjct: 15 HRDRDRNGERHRERE----RDKEKKEHRESRRSEREKSSD---DKHREKERDK-HRDKRD 66
Query: 161 SERYRSDRDE-----------RERSRDREVIERERSRDREVIERERSRDRE 200
ER RS RD+ RE+ RDR+ R+ R E+ER RD+E
Sbjct: 67 KERTRSSRDDERDRARERTKDREKERDRDHEGRDAER-----EKERERDKE 112
>gi|332233720|ref|XP_003266051.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Nomascus leucogenys]
gi|441658625|ref|XP_004091273.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 510
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|384252045|gb|EIE25522.1| hypothetical protein COCSUDRAFT_61728 [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
L+V + ++ TE +L++ FE +G V+ V+L ++G +G+ FV+F D + A +
Sbjct: 155 LFVARVSYDATEKKLKREFEEYGPVKRVRLVTQKDSGKPRGYAFVEFEHKNDMKTAYKMA 214
Query: 414 GQLEIVGRAIKV 425
+I GR + V
Sbjct: 215 DGRKIEGRRVVV 226
>gi|149059243|gb|EDM10250.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Rattus
norvegicus]
Length = 610
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 243
Query: 412 LNGQL 416
NG +
Sbjct: 244 FNGVM 248
>gi|426246381|ref|XP_004016973.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Ovis aries]
gi|426246383|ref|XP_004016974.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Ovis aries]
Length = 516
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|296194448|ref|XP_002744950.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Callithrix jacchus]
Length = 630
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 61/209 (29%)
Query: 268 FFSRAGKVRDVRLIMDRNSRR--SKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKP-- 323
FS G++ ++RL N+ S V YV+F D SV +A L+ + + ++V P
Sbjct: 38 LFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCA 97
Query: 324 -------SEAEKNLVQSNSSIAGASGGGTGPY--------------SGGA---------- 352
S+A L + + + G G P S GA
Sbjct: 98 EGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNI 157
Query: 353 ------------------------RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLD 387
R +YVGNL+ T DQL + F+ G V+ V++ D
Sbjct: 158 ATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGD 217
Query: 388 ETGHCKGFGFVQFARLEDARNALNLNGQL 416
ET + F FV+FA AL NG +
Sbjct: 218 ETQPTR-FAFVEFADQNSVPRALAFNGVM 245
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 72/189 (38%), Gaps = 26/189 (13%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI-AL 309
V+ ++ E+D+ FF GK+ +V L G G+VEF D A+ L
Sbjct: 4 VYVGRLGYHVREKDIQRFFGSYGKLLEVDLKN--------GYGFVEFEDSRDADDAVYEL 55
Query: 310 SGQPLLGQPVMVK----PSEAEKNLVQSNSSIAGASGGGTGPYSGGAR---------RLY 356
+G+ L G+ V+V+ P + S G+ GG SG + RL
Sbjct: 56 NGKDLCGERVIVEHARGPRRDRDGYGYGSRSKHGSPGGYRNQRSGRDKYGPPVRTEFRLV 115
Query: 357 VGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQL 416
V NL + L+ G V + G ++F D + A+
Sbjct: 116 VENLSSRCSWQDLKDFMRQAGEVTYADAHKERPNE----GVIEFRSYSDLKRAVEKLDGT 171
Query: 417 EIVGRAIKV 425
EI GR I++
Sbjct: 172 EINGRRIRL 180
>gi|440908499|gb|ELR58509.1| Splicing factor, arginine/serine-rich 12, partial [Bos grunniens
mutus]
Length = 534
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 84 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 142
Query: 412 LNGQL 416
NG +
Sbjct: 143 FNGVM 147
>gi|403267427|ref|XP_003925834.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Saimiri boliviensis boliviensis]
Length = 630
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 61/209 (29%)
Query: 268 FFSRAGKVRDVRLIMDRNSRR--SKGVGYVEFYDVMSVPMAIALSGQPLLGQPVMVKP-- 323
FS G++ ++RL N+ S V YV+F D SV +A L+ + + ++V P
Sbjct: 38 LFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCA 97
Query: 324 -------SEAEKNLVQSNSSIAGASGGGTGPY--------------SGGA---------- 352
S+A L + + + G G P S GA
Sbjct: 98 EGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNI 157
Query: 353 ------------------------RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLD 387
R +YVGNL+ T DQL + F+ G V+ V++ D
Sbjct: 158 ATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGD 217
Query: 388 ETGHCKGFGFVQFARLEDARNALNLNGQL 416
ET + F FV+FA AL NG +
Sbjct: 218 ETQPTR-FAFVEFADQNSVPRALAFNGVM 245
>gi|26336164|dbj|BAC31767.1| unnamed protein product [Mus musculus]
Length = 317
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 46 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 104
Query: 412 LNGQL 416
NG +
Sbjct: 105 FNGVM 109
>gi|344272595|ref|XP_003408117.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Loxodonta
africana]
Length = 630
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|410948709|ref|XP_003981073.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Felis catus]
Length = 626
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|291395458|ref|XP_002714054.1| PREDICTED: splicing factor, arginine/serine-rich 12 [Oryctolagus
cuniculus]
Length = 618
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|119571716|gb|EAW51331.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Homo
sapiens]
Length = 623
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|395825410|ref|XP_003785928.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Otolemur garnettii]
Length = 617
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|166240199|ref|XP_635459.2| hypothetical protein DDB_G0291063 [Dictyostelium discoideum AX4]
gi|165988479|gb|EAL61962.2| hypothetical protein DDB_G0291063 [Dictyostelium discoideum AX4]
Length = 2110
Score = 44.7 bits (104), Expect = 0.16, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 13/86 (15%)
Query: 165 RSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKERE-KERESRD 223
++ R E E+S RE I RS D + S RE+ R RD+ELKE+E +E+E RD
Sbjct: 1592 QTPRKEIEKSESRENIRDSRSNDNN---QSLSSSREI----RERDKELKEKEQREKEQRD 1644
Query: 224 NDKESRRPKEKKEQVEPEVDPERDQR 249
D+E+R + + D DQR
Sbjct: 1645 KDRENRERDNRDVR-----DSRNDQR 1665
>gi|444510679|gb|ELV09695.1| Splicing regulatory glutamine/lysine-rich protein 1 [Tupaia
chinensis]
Length = 592
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 147 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 205
Query: 412 LNGQL 416
NG +
Sbjct: 206 FNGVM 210
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALN-L 412
L V NL + T + L++VFE +G V V +P T +GF FV+F D +A++ L
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 413 NGQLEIVGRAIKV 425
+G + + GR ++V
Sbjct: 61 DGYM-MDGRELRV 72
>gi|194223833|ref|XP_001492097.2| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Equus caballus]
Length = 628
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|395510384|ref|XP_003759457.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Sarcophilus harrisii]
Length = 596
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 223
Query: 412 LNGQL 416
NG +
Sbjct: 224 FNGVM 228
>gi|291222252|ref|XP_002731131.1| PREDICTED: small nuclear ribonucleoprotein 70kDa polypeptide (RNP
antigen)-like, partial [Saccoglossus kowalevskii]
Length = 402
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Query: 322 KPSEAEKNLVQSNSSIAGASGGGTGPYSGGA-RRLYVGNLHFNMTEDQLRQVFEPFGTVE 380
K E + + Q G+ P G A + L+V ++++ +E +LR+ FE +G +
Sbjct: 21 KRKEKNEEIAQRIQEECGSWDPNANPRFGDAFKTLFVARINYDTSESKLRREFESYGPIN 80
Query: 381 LVQLPLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKVSAVTDQSGLQDLGA 439
+++ ETG +G+ F+++ D +A +I GR + V ++ L
Sbjct: 81 SIRMVQSVETGKPRGYAFIEYEHERDMHSAYKYADGKKIDGRRVLVDVERARTVKGWLPR 140
Query: 440 NTTGDFDDDEGGGLSLNAR 458
G GG +N R
Sbjct: 141 RLGGGLGSTRKGGADVNIR 159
>gi|402871715|ref|XP_003899799.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Papio anubis]
gi|387541364|gb|AFJ71309.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a
[Macaca mulatta]
Length = 626
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|355691354|gb|EHH26539.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
mulatta]
gi|355749961|gb|EHH54299.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
fascicularis]
Length = 620
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 209 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 267
Query: 412 LNGQL 416
NG +
Sbjct: 268 FNGVM 272
>gi|397470471|ref|XP_003806845.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Pan paniscus]
Length = 626
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|332233718|ref|XP_003266050.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Nomascus leucogenys]
Length = 626
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|410300176|gb|JAA28688.1| splicing regulatory glutamine/lysine-rich protein 1 [Pan
troglodytes]
Length = 626
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|426384528|ref|XP_004058814.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Gorilla gorilla gorilla]
Length = 626
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|116089325|ref|NP_001070667.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a [Homo
sapiens]
gi|119571714|gb|EAW51329.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Homo
sapiens]
Length = 624
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|363744206|ref|XP_424756.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Gallus gallus]
Length = 621
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|348532937|ref|XP_003453962.1| PREDICTED: nipped-B-like protein [Oreochromis niloticus]
Length = 2680
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 24/110 (21%)
Query: 120 RDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDRE- 178
++RN ++ ++RDR + H T++++E+D++KE+ ER+R RD+E
Sbjct: 671 KERNIEKEKERDRDKERH-TEKEKERDRDKEK------------------ERDRDRDKER 711
Query: 179 VIERERSRDREV---IERERSRDRE-VIERERSRDRELKEREKERESRDN 224
IE+E+ RDR+ IE+ER RD++ IE+E+ RD+ K++ R+N
Sbjct: 712 HIEKEKERDRDKEKHIEKERDRDKDRHIEKEKERDKAKDRDRKQKMLREN 761
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Query: 165 RSDRDERERSRDRE---VIERERSRDREVIERERSRDRE-VIERERSRDRELKEREKERE 220
R+ E+ER RD+E E+ER RD+E ER+R RD+E IE+E+ RDR+ KE+ E+E
Sbjct: 673 RNIEKEKERDRDKERHTEKEKERDRDKEK-ERDRDRDKERHIEKEKERDRD-KEKHIEKE 730
Query: 221 SRDNDKESRRPKEK 234
RD DK+ KEK
Sbjct: 731 -RDRDKDRHIEKEK 743
>gi|426246379|ref|XP_004016972.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Ovis aries]
Length = 632
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|301767860|ref|XP_002919343.1| PREDICTED: hypothetical protein LOC100466086 [Ailuropoda
melanoleuca]
gi|281341776|gb|EFB17360.1| hypothetical protein PANDA_007970 [Ailuropoda melanoleuca]
Length = 628
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|329663695|ref|NP_001193066.1| splicing regulatory glutamine/lysine-rich protein 1 [Bos taurus]
Length = 632
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|431907792|gb|ELK11399.1| Splicing factor, arginine/serine-rich 12 [Pteropus alecto]
Length = 630
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|74217177|dbj|BAC34905.2| unnamed protein product [Mus musculus]
Length = 513
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 243
Query: 412 LNGQL 416
NG +
Sbjct: 244 FNGVM 248
>gi|351713063|gb|EHB15982.1| Splicing factor, arginine/serine-rich 12 [Heterocephalus glaber]
Length = 535
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|345794152|ref|XP_544361.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Canis lupus familiaris]
Length = 626
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|340975515|gb|EGS22630.1| hypothetical protein CTHT_0011020 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 367
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARN----A 409
+Y G L + ++E + +F FG ++L D ETG KGFG++++ ED R+
Sbjct: 35 IYFGGLPYELSEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKY---EDQRSTDLAV 91
Query: 410 LNLNGQLEIVGRAIKV 425
NL+G EI GR I+V
Sbjct: 92 DNLSGA-EIGGRLIRV 106
>gi|432104582|gb|ELK31194.1| Splicing regulatory glutamine/lysine-rich protein 1 [Myotis
davidii]
Length = 614
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 145 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 203
Query: 412 LNGQL 416
NG +
Sbjct: 204 FNGVM 208
>gi|119595730|gb|EAW75324.1| death inducer-obliterator 1, isoform CRA_c [Homo sapiens]
Length = 2276
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 85 SWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDR 132
+WSR+ DRPR HRD+D+ RD DR+RE R NRDR R+ DR
Sbjct: 2158 NWSRERDWDRPREWDRHRDKDSSRDWDRNRE----RSANRDREREADR 2201
>gi|301129165|ref|NP_149072.2| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|301129170|ref|NP_001180298.1| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|116241332|sp|Q9BTC0.5|DIDO1_HUMAN RecName: Full=Death-inducer obliterator 1; Short=DIO-1; Short=hDido1;
AltName: Full=Death-associated transcription factor 1;
Short=DATF-1
Length = 2240
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 85 SWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDR 132
+WSR+ DRPR HRD+D+ RD DR+RE R NRDR R+ DR
Sbjct: 2122 NWSRERDWDRPREWDRHRDKDSSRDWDRNRE----RSANRDREREADR 2165
>gi|44971714|gb|AAS49899.1| death inducer-obliterator-3 [Homo sapiens]
Length = 2240
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 85 SWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDR 132
+WSR+ DRPR HRD+D+ RD DR+RE R NRDR R+ DR
Sbjct: 2122 NWSRERDWDRPREWDRHRDKDSSRDWDRNRE----RSANRDREREADR 2165
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 225 DKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 284
D+ + R K+ + V PE + T+F + D+ V +FF+ +V VRL D
Sbjct: 354 DRATDRAKKHGDSVSPESE------TLFIGNLPFDTDQETVRQFFAEVAEVASVRLPTDP 407
Query: 285 NSRRSKGVGYVEFYDVMSVPMAI-ALSGQPL 314
+S KG GYV F V L+G PL
Sbjct: 408 DSGNLKGFGYVTFTSVEDAKNVFQQLNGAPL 438
>gi|348553835|ref|XP_003462731.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cavia porcellus]
Length = 556
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|50949479|emb|CAH10414.1| hypothetical protein [Homo sapiens]
Length = 331
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 124
Query: 412 LNGQL 416
NG +
Sbjct: 125 FNGVM 129
>gi|15229825|ref|NP_190636.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|13633916|sp|Q42404.1|RU17_ARATH RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|1255711|gb|AAD12773.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|1354469|gb|AAD12775.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|6561970|emb|CAB62436.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|14532500|gb|AAK63978.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|20334806|gb|AAM16264.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|332645171|gb|AEE78692.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 427
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLN 413
L+V L++ +E ++++ FE +G ++ V L D+ T KG+ F+++ D + A
Sbjct: 140 LFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQA 199
Query: 414 GQLEIVGRAIKV 425
+I GR + V
Sbjct: 200 DGQKIDGRRVLV 211
>gi|297819752|ref|XP_002877759.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
gi|297323597|gb|EFH54018.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDE-TGHCKGFGFVQFARLEDARNALNLN 413
L+V L++ +E ++++ FE +G ++ V L D+ T KG+ F+++ D + A
Sbjct: 140 LFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQA 199
Query: 414 GQLEIVGRAIKV 425
+I GR + V
Sbjct: 200 DGQKIDGRRVLV 211
>gi|193787205|dbj|BAG52411.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|297294417|ref|XP_001087835.2| PREDICTED: hypothetical protein LOC697731 isoform 1 [Macaca
mulatta]
Length = 516
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 240
Query: 412 LNGQL 416
NG +
Sbjct: 241 FNGVM 245
>gi|350594366|ref|XP_003134051.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1,
partial [Sus scrofa]
Length = 587
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 353 RRLYVGNLHF-NMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
R +YVGNL+ T DQL + F+ G V+ V++ DET + F FV+FA AL
Sbjct: 220 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTR-FAFVEFADQNSVPRALA 278
Query: 412 LNGQL 416
NG +
Sbjct: 279 FNGVM 283
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 325 EAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQL 384
E EK ++ +I+G PY + L+V L + TE ++++ FE +G ++ V+L
Sbjct: 121 ELEKYDPHTDPNISG------DPY----KTLFVARLSYETTESRIKREFESYGAIKRVRL 170
Query: 385 PLD-ETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
D E+ +G+ F+++ D + A +I GR + V
Sbjct: 171 VTDTESNKPRGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLV 212
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
L+V L + TE ++++ FE +G ++ V+L D +T +G+ F+++ D + A
Sbjct: 143 LFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQA 202
Query: 414 GQLEIVGRAIKV 425
+I GR + V
Sbjct: 203 DGRKIDGRRVLV 214
>gi|307213590|gb|EFN88983.1| hypothetical protein EAI_05389 [Harpegnathos saltator]
Length = 130
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 85/142 (59%), Gaps = 16/142 (11%)
Query: 74 RRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRD-R 132
R++ERD R R+ R R R + RDR+TER RDR+ E RDR +R RDR+
Sbjct: 2 RKRERDRETERQRDRETERQRDRETERQRDRETERQRDRETE--RQRDRETERQRDRETE 59
Query: 133 RERDHDTD--RDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREV 190
R+RD +T+ RDRE +++++RE + ++ER R DR E ER RDRE ER RDRE
Sbjct: 60 RQRDRETERQRDRETERQRDRETERQRDRETERQR-DR-ETERQRDRET---ERQRDRET 114
Query: 191 IERERSRDREVIERERSRDREL 212
ER RDRE ER RDRE
Sbjct: 115 ---ERQRDRET---ERQRDRET 130
>gi|241247398|ref|XP_002402802.1| serine/threonine kinase pskh, putative [Ixodes scapularis]
gi|215496404|gb|EEC06044.1| serine/threonine kinase pskh, putative [Ixodes scapularis]
Length = 539
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 22/165 (13%)
Query: 93 DRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHD----TDRDREKDKE 148
DR +S + DRD DRD+ +R+ DR++ DRD+ ERD +DRD+ +
Sbjct: 149 DRDKSDRDKSDRDKS---DRDKSDRDKSDRDK---SDRDKSERDKSDRDKSDRDKSDHDK 202
Query: 149 KEREKSHRSGS---QSERYRSDRD--------ERERSRDREVIERERSRDREVIERERSR 197
+R+KS R S +S+R +SDRD +R+RS E +R+RS E ER+RS
Sbjct: 203 SDRDKSDRDKSDRDKSDRDKSDRDRVDKNEKSDRDRSDKYEKSDRDRSDKYEKSERDRS- 261
Query: 198 DREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQVEPEV 242
D++ +R DR+ +R ++ + D DK + ++K E+ +V
Sbjct: 262 DKDKSDRHDKSDRDKSDRHEKSDKSDRDKYDKSDRDKSERSSYKV 306
>gi|170108674|ref|XP_001885545.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164639421|gb|EDR03692.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 568
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 76/194 (39%), Gaps = 20/194 (10%)
Query: 251 VFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAI--- 307
V+ + + RD+ EF AG+V +++ SKG G VEF A+
Sbjct: 166 VYVGNLSYEVKYRDLMEFMRGAGEVLFAEVLVTPTGV-SKGCGIVEFASQEDAQRAVREL 224
Query: 308 ---ALSGQPLLGQP-------VMVKPSEAEKNLVQSNSSIAGA------SGGGTGPYSGG 351
L G+P+ + P + + + + A S G +
Sbjct: 225 SEQPLLGRPVFIREDRETEARFGATPVPGKIGMAMAGQGLHAAPPPRPPSHNYFGTQANP 284
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
+LYVGNL + L+ +F G + + + G KG G V F +DA+ A++
Sbjct: 285 GNQLYVGNLPYQAGWQDLKDLFRTAGNIIRADINIGADGRPKGSGTVVFETPKDAQQAIS 344
Query: 412 LNGQLEIVGRAIKV 425
+ + GR ++V
Sbjct: 345 MYHGFDWYGRTLEV 358
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
++++ V NL ++ + L ++FE G VEL ++ D T KG G VQFA++ +A A+
Sbjct: 469 SQQIMVRNLPWSTANEDLVELFETTGQVELAEILFDGT-RSKGCGVVQFAQVPEAETAIA 527
Query: 412 LNGQLEIVGRAIKV 425
GR + V
Sbjct: 528 KFQHYMYGGRPLDV 541
>gi|348503678|ref|XP_003439391.1| PREDICTED: WD repeat-containing protein 60 [Oreochromis niloticus]
Length = 1083
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 14/117 (11%)
Query: 102 RDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREK-------DKEKEREKS 154
RDRD ER RD+++E RDR+R R DR +R D D +R RE+ D E+ R K
Sbjct: 132 RDRDKERHRDKEKE--RVRDRDRHREEDRSKRRDDGDKERKREEQDRELRDDGERRRHKE 189
Query: 155 HRS--GSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRD 209
R G+Q E++ + +R R R+R E E +R+ + ER RD + E++ R+
Sbjct: 190 SREVRGAQIEQHHREEKDRHRERERHQNEYEDTRN---AKEERHRDMKHSEQKEDRE 243
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 73 DRRKERDSSCHRSWSRDGGRDRPRS-SWEHRDRDTERDRDRDREERNGRDRNRDRGRDRD 131
+RR++R+ R W RD GR+ R WE R R+ E D++RDR + RD++ +RG+D
Sbjct: 2164 ERRRDREHG--RPWERDRGRNWNRDRDWE-RHREKEWDKNRDRSQNKDRDKDSERGKD-- 2218
Query: 132 RRERDHDTDRDR 143
ER D DR R
Sbjct: 2219 -WERSRDRDRTR 2229
>gi|357518361|ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNALNLN 413
L+V L + TE ++++ FE +G ++ V+L D E+ +G+ F+++ D + A
Sbjct: 137 LFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQA 196
Query: 414 GQLEIVGRAIKV 425
+I GR + V
Sbjct: 197 DGRKIEGRRVLV 208
>gi|321248711|ref|XP_003191213.1| nucleic acid binding protein [Cryptococcus gattii WM276]
gi|317457680|gb|ADV19426.1| Nucleic acid binding protein, putative [Cryptococcus gattii WM276]
Length = 2060
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 69 SRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGR 128
S D +K ++ S S D GR+ RS RD ER+RD++ ++ RDR + R
Sbjct: 1728 STAEDDKKRQEDSVPASTQSDAGRESRRSR-----RDGERERDKEEKKSRERDREDRKER 1782
Query: 129 DRDRRERDHDTDRDREKDKEKEREK 153
RDR R D+DR R++D+E K
Sbjct: 1783 GRDRSYRGEDSDRKRKRDEEPSSRK 1807
>gi|70941972|ref|XP_741209.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519442|emb|CAH74487.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 635
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 9/87 (10%)
Query: 73 DRRKERDSSCHRSWSRDGGR--DRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDR 130
DR +E D +R + RD R DR R+ RDR+ E DRDR+RE RDRNR+ RDR
Sbjct: 527 DRNREFDRDRNREFDRDRNREMDRDRNREMDRDRNREMDRDRNREM--DRDRNREMDRDR 584
Query: 131 DR-----RERDHDTDRDREKDKEKERE 152
+R R R+ D DR+RE D+++ RE
Sbjct: 585 NREVDRDRNREFDRDRNREFDRDRNRE 611
>gi|409048188|gb|EKM57666.1| hypothetical protein PHACADRAFT_251433 [Phanerochaete carnosa
HHB-10118-sp]
Length = 542
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 115/287 (40%), Gaps = 39/287 (13%)
Query: 169 DERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRELKEREKERESRDNDKES 228
+ER R+ DR R +SR R R R R RS+ + R R+ R D +
Sbjct: 71 EER-RNGDRRRRSRSKSRSRSRKRSTSPRRRSRRSRSRSKSLRSRSRSHSRDRRPADSFA 129
Query: 229 RR-------PKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLI 281
R P E E VE +R+ R V+ + RD+ EF AG+V ++
Sbjct: 130 RSLGGPMNAPHE--EAVEFAKVSKRENR-VYVGNLSYDVKYRDLMEFMRGAGEVLFAEVL 186
Query: 282 MDRNSRRSKGVGYVEFYDVMSVPMAI-ALSGQPLLGQPVMVK------------PSEAEK 328
+ SKG G VEF AI LS QPLLG+PV ++ P +
Sbjct: 187 ITPTG-VSKGCGIVEFTSQEDAQRAIRELSEQPLLGRPVFIREDRENESRFGATPVPGKI 245
Query: 329 NLVQSNSSIAGAS----------GGGTGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGT 378
+ + + A GT P +LYVGNL + L+ +F G
Sbjct: 246 GMAMAGQGLHAAPPPRPPHHNYFAAGTNP----GNQLYVGNLPYQAGWQDLKDLFRSAGN 301
Query: 379 VELVQLPLDETGHCKGFGFVQFARLEDARNALNLNGQLEIVGRAIKV 425
+ + + G KG G V F +DA+ A+ + E GR ++V
Sbjct: 302 IIRADINIGADGRPKGSGTVIFETAKDAQQAIGMYNGFEWYGRTLEV 348
>gi|221052874|ref|XP_002261160.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247164|emb|CAQ38348.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 971
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 88 RDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDR---RERDHDTDRDRE 144
R+ RDRPR + RDR E +RDR RE RDR R+ RDR R R+R + +RDR
Sbjct: 677 REAERDRPREA--ERDRPREAERDRPREAE--RDRPREAERDRQREAERDRQREAERDRP 732
Query: 145 KDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREV-IERERSRDREVI 202
++ E++R++ Q E R + E ER R RE ER+R R+ E +RE RDR+ +
Sbjct: 733 REAERDRQREAERDRQREAERDRQREAERDRQREA-ERDRQREAERDRQREAERDRQTL 790
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 22/131 (16%)
Query: 66 RDESRNHDRRKERDS--SCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRN 123
R+ R+ R ERD R R+ RDRPR + R R+ ERDR R+ E RDR
Sbjct: 677 REAERDRPREAERDRPREAERDRPREAERDRPREAERDRQREAERDRQREAE----RDRP 732
Query: 124 RDRGRDRDR---RERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVI 180
R+ RDR R R+R + +RDR+++ E++R++ ++ER R +RE RDR
Sbjct: 733 REAERDRQREAERDRQREAERDRQREAERDRQR------EAERDR----QREAERDR--- 779
Query: 181 ERERSRDREVI 191
+RE RDR+ +
Sbjct: 780 QREAERDRQTL 790
>gi|357145731|ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 475
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
L+V L++ +E ++++ FE +G ++ V+L D ET +G+ F+++ D +NA
Sbjct: 141 LFVARLNYETSESRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAY 197
>gi|198465678|ref|XP_002135021.1| GA23474 [Drosophila pseudoobscura pseudoobscura]
gi|198150268|gb|EDY73648.1| GA23474 [Drosophila pseudoobscura pseudoobscura]
Length = 1099
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 63 SKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDR 122
SK R S+ R KER S R S+D R + R + R R ER R + R R R
Sbjct: 493 SKERQRSKERQRSKERQKSKDRQRSKDRQRSKDRQRSKERQRSKERQRSKARLYSKERLR 552
Query: 123 NRDRGRDRDRR----ERDHDTDRDREK------DKEKEREKSHRSGSQSERYRSDRDERE 172
+++R R +D+ +RD DR R K DK +E+ G Q + R ER
Sbjct: 553 SKERARSKDKPVVEIKRDRSKDRQRSKERKRSVDKAPSKERDMSKGRQRSKERQRSKERR 612
Query: 173 RSRDR--EVIERERSRDRE-VIERERSRDRE-----VIERERSR 208
RS+DR + E++RS++R+ +R+RS++R+ + +ER+R
Sbjct: 613 RSKDRGQQSNEKKRSKERQRSKDRQRSKERQGVPNLAVSKERTR 656
>gi|328769477|gb|EGF79521.1| hypothetical protein BATDEDRAFT_89594 [Batrachochytrium
dendrobatidis JAM81]
Length = 388
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 64 KSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRN 123
+++++SR+ R + RD S R R R R RS RDR +R+RDR + GRDR+
Sbjct: 168 RNKNQSRDRYRERSRDRSIARGRDRSIDRGRDRSIDRGRDRSIDRNRDRSIDR--GRDRS 225
Query: 124 RDRGRDRD-RRERDHDTDRDREKDKEKEREKSH-RSGSQSERYRSDR 168
DRGRDR R RD DR R++ +K R + H RS S+S +R DR
Sbjct: 226 IDRGRDRSIDRNRDRSIDRGRDRSIDKSRSRIHDRSRSRSVNHRLDR 272
>gi|195499487|ref|XP_002096969.1| GE25964 [Drosophila yakuba]
gi|194183070|gb|EDW96681.1| GE25964 [Drosophila yakuba]
Length = 908
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 76 KERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRER 135
KE+D R S++ RDR +S + RD+ E+DRDR E+ +DR+RDR + +D+
Sbjct: 180 KEKDRDRDRDKSKEKDRDRDKSKEKDRDKSKEKDRDRVTEKSKEKDRDRDRAKSKDKFTA 239
Query: 136 DHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRD 176
++EK+K + R++S + R +R ER++ RD
Sbjct: 240 AQ-APFEKEKEKSEGRKRSAVEPASHPEKR-ERHERDKQRD 278
>gi|449439147|ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
[Cucumis sativus]
Length = 1118
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 12/73 (16%)
Query: 84 RSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDR 143
RS SR D P+ S HR+RD ERD+ ERNG DRGRD+++R+R+ D +
Sbjct: 5 RSKSRRDDLDEPKKS--HRERDRERDK-----ERNG-----DRGRDKEKRDRERSYDSEE 52
Query: 144 EKDKEKEREKSHR 156
E+E+EK R
Sbjct: 53 LVQHEREKEKPRR 65
>gi|50409715|ref|XP_456900.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
gi|49652564|emb|CAG84877.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
Length = 447
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 29/164 (17%)
Query: 250 TVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFYDVMSVPMAIA- 308
T+F ++ D+ + F G V R+IM+R++ +S+G GYV+F + A+
Sbjct: 199 TLFVGRLSWSIDDEWLRREFEPVGGVISARVIMERSTGKSRGYGYVDFDSKSAAEKALQE 258
Query: 309 LSGQPLLGQPVMVKPSEAEKNLVQSNSSIAGASGGGTGPYSGGARRLYVGNLHFNMTEDQ 368
G+ L G+P+ + S + + N+ A G S + L+VGNL FN D
Sbjct: 259 YQGKELDGRPINLDMSTGKPHASNPNTDRAKQFGDVP---SAPSDTLFVGNLSFNAERDS 315
Query: 369 LRQVFEPFGTV-------------------------ELVQLPLD 387
L F +GTV + + L+
Sbjct: 316 LFNTFGEYGTVVSCRIPTHPDTQQPKGFGYVQFSSVDEAKAALE 359
>gi|449525702|ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
42-like [Cucumis sativus]
Length = 1098
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 12/73 (16%)
Query: 84 RSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDR 143
RS SR D P+ S HR+RD ERD+ ERNG DRGRD+++R+R+ D +
Sbjct: 5 RSKSRRDDLDEPKKS--HRERDRERDK-----ERNG-----DRGRDKEKRDRERSYDSEE 52
Query: 144 EKDKEKEREKSHR 156
E+E+EK R
Sbjct: 53 LVQHEREKEKPRR 65
>gi|357155772|ref|XP_003577233.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 446
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 536 IFDTIGVPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKD------ 589
++ +P++ + L + +E DI ED+ E K+G L + + +
Sbjct: 336 VYQVGALPTKVICLTQVVTADELKDDEEYEDIMEDMRLEAGKYGTLVKVVIPRPHPSGEP 395
Query: 590 --SAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATF 625
G V+L + + + A+ A+HGR F G + A F
Sbjct: 396 VAGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVF 433
>gi|301610223|ref|XP_002934650.1| PREDICTED: hypothetical protein LOC100495464 [Xenopus (Silurana)
tropicalis]
Length = 559
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 38/161 (23%)
Query: 33 SEDRVRSRSSKCKSDEKVEDYDDDGHRSR-GSKSRDESRNH----DRRKERDSSCHRSWS 87
S+D+ R++ + +S ++ D D RSR G + +D +R+ DR +E + R +
Sbjct: 391 SKDKERNKEKRSRSKDRQRDRGQDRDRSREGYRGQDRARSREGERDRSREGNRGQDRDRN 450
Query: 88 RDG--GRDRPRSSWEHRDRDTERDRDRDREERNGRDR----------------------- 122
R+G G+DR RS R+R ER+RDR RE G+DR
Sbjct: 451 REGYRGQDRDRSPEGDRERSRERNRDRSREGNRGQDRDRNQEGYRGQDRDRSREGDRERS 510
Query: 123 ---NRDRGRDRDR-----RERDHDTDRDREKDKEKEREKSH 155
NR RG+DRDR R +D D DR+R +++ +ER++SH
Sbjct: 511 KEKNRGRGQDRDRNREGYRGQDRDRDRNRGQNRSQERDRSH 551
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 92/181 (50%), Gaps = 38/181 (20%)
Query: 50 VEDYD----DDGHRSRGSKSRDESRNHDRRKERDSSCH------RSWSRDGGRDRPRSSW 99
+ +YD D R++ +SR + R DR ++RD S R+ SR+G RDR R
Sbjct: 383 INNYDCGNSKDKERNKEKRSRSKDRQRDRGQDRDRSREGYRGQDRARSREGERDRSREG- 441
Query: 100 EHRDRDTERDRDR--------------DRE---ERNGRDRNR--DRGRDRDRRE---RDH 137
+R +RDR+R DRE ERN RDR+R +RG+DRDR + R
Sbjct: 442 ---NRGQDRDRNREGYRGQDRDRSPEGDRERSRERN-RDRSREGNRGQDRDRNQEGYRGQ 497
Query: 138 DTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIE-RERSRDREVIERERS 196
D DR RE D+E+ +EK+ G +R R ++R RDR + R + RDR +R+
Sbjct: 498 DRDRSREGDRERSKEKNRGRGQDRDRNREGYRGQDRDRDRNRGQNRSQERDRSHQDRDHK 557
Query: 197 R 197
R
Sbjct: 558 R 558
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
L+V L++ +E ++++ FE +G ++ V+L D ET +G+ F+++ D +NA
Sbjct: 141 LFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAY 197
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
L+V L++ +E ++++ FE +G ++ V+L D ET +G+ F+++ D +NA
Sbjct: 141 LFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAY 197
>gi|145482961|ref|XP_001427503.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394584|emb|CAK60105.1| unnamed protein product [Paramecium tetraurelia]
Length = 709
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 42/240 (17%)
Query: 105 DTERDRDRDREERNGRDRNRDR-------------GRDRDRRERDHDTDRDREKDKEKER 151
+ +R++DRDR+ +D NRDR R ++R E HD D+ K K+KER
Sbjct: 396 NKDREKDRDRQRDKEKDYNRDREKFDKSKYDKKDDHRQKERNESKHDYDK---KQKDKER 452
Query: 152 EKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSRDRE 211
+K+ + RSDR +RER + E+ERSR ++ER RD+ + + R
Sbjct: 453 DKNREKSKEKSFERSDRKDRERRK-----EKERSRGG---DKERDRDQNNKKHKDYRRET 504
Query: 212 LKEREKERE---SRDNDKESRRPKEKKEQVEPEVDPERDQRTVFAYQICLKADERDVYEF 268
K+R +ER SR D+ K +++ E+ + +Q F + L + +++ +
Sbjct: 505 TKKRSEERSKPRSRSEDRRQGHNSNKNKKI-VELASQSEQPREFYSSVSLSSHKQEQEQ- 562
Query: 269 FSRAGKVRDVRLIMDRNSRRSKGVGYVEF---YDVMSVPMAIALSGQPLLGQPVMVKPSE 325
+D L ++NS R + V+ +V+ P A QPL+ QPV++ P+E
Sbjct: 563 -------QDHEL--EQNSVRPEQKDQVDLGVILNVLDSPNQNAQQFQPLI-QPVIITPAE 612
>gi|302837077|ref|XP_002950098.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
gi|300264571|gb|EFJ48766.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
Length = 1079
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQL--PLDETGHCKG--FGFVQFARLEDARNAL 410
LYVGNL + E+ L+ F FG + V++ P DE KG GFV F R +DA A+
Sbjct: 224 LYVGNLAPEVDEEVLKIEFGRFGAIASVKVMWPRDEEQRRKGRNCGFVAFMRRDDAETAM 283
Query: 411 -NLNG------QLEI-VGRAIKVSAV 428
LNG +L I G+AI + A+
Sbjct: 284 RKLNGITLHGNELHIGWGKAIPLPAI 309
>gi|326504184|dbj|BAJ90924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLD-ETGHCKGFGFVQFARLEDARNAL 410
L+V L++ +E ++++ FE +G ++ V+L D +T +G+ F+++ D +NA
Sbjct: 141 LFVARLNYETSESRVKREFEAYGPIKRVRLVTDKDTNKPRGYAFIEYMHTRDMKNAY 197
>gi|307206228|gb|EFN84308.1| hypothetical protein EAI_10098 [Harpegnathos saltator]
Length = 230
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 108/184 (58%), Gaps = 24/184 (13%)
Query: 76 KERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDR------DREERNGRDRNRDRGRD 129
++RD R R+ R R R + RDR+TER RDR DRE RDR +R RD
Sbjct: 21 RQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRD 80
Query: 130 RD-RRERDHDTDR--DREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSR 186
R+ R+RD +T+R DRE +++++RE + ++ER R DR E ER RDRE ER R
Sbjct: 81 RETERQRDRETERQRDRETERQRDRETERQRDRETERQR-DR-ETERQRDRET---ERQR 135
Query: 187 DREVIERERSRDREVIERERSRDRELKEREKERES---RDNDKESRRPKEKKEQVEPEVD 243
DRE ER RDRE ER RDRE ER+++RE+ RD + E +R +E + Q + E +
Sbjct: 136 DRET---ERQRDRET---ERQRDRET-ERQRDRETERQRDRETERQRDRETERQRDRETE 188
Query: 244 PERD 247
+RD
Sbjct: 189 RQRD 192
>gi|389747840|gb|EIM89018.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 540
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
++++ V NL ++ + L ++FE G VEL ++ L E KG G VQFA + +A A+
Sbjct: 441 SQQIMVRNLPWSTANEDLVELFETTGQVELAEI-LYEGSRSKGAGVVQFAAITEAETAIA 499
Query: 412 LNGQLEIVGRAIKV 425
Q GR + V
Sbjct: 500 KFQQYMYGGRPLDV 513
>gi|11360164|pir||T42664 hypothetical protein DKFZp434P1115.1 - human (fragment)
gi|6453489|emb|CAB61387.1| hypothetical protein [Homo sapiens]
Length = 618
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 85 SWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDR 132
+WSR+ DRPR HRD+D+ RD DR+RE R NRDR R+ DR
Sbjct: 500 NWSRERDWDRPREWDRHRDKDSSRDWDRNRE----RSANRDREREADR 543
>gi|307209128|gb|EFN86270.1| hypothetical protein EAI_15355 [Harpegnathos saltator]
Length = 182
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 91/149 (61%), Gaps = 17/149 (11%)
Query: 76 KERDSSCHRSWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRD-RRE 134
++RD R R+ R R R + RDR+TER RDR+ E RDR +R RDR+ R+
Sbjct: 42 RQRDRETERQRDRETERQRDRETERQRDRETERQRDRETE--RQRDRETERQRDRETERQ 99
Query: 135 RDHDTD--RDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDREVIERERSRDREVIE 192
RD +T+ RDRE +++++RE + ++ER R DR E ER RDRE ER RDRE
Sbjct: 100 RDRETERQRDRETERQRDRETERQRDRETERQR-DR-ETERQRDRET---ERQRDRET-- 152
Query: 193 RERSRDREVIERERSRDRELKEREKERES 221
ER RDRE ER RDRE ER+++RE+
Sbjct: 153 -ERQRDRET---ERQRDRET-ERQRDRET 176
>gi|126314555|ref|XP_001362188.1| PREDICTED: TRAF3-interacting protein 1 isoform 1 [Monodelphis
domestica]
Length = 715
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 21/121 (17%)
Query: 39 SRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSS 98
SR+ K K D ++ + D SR K ++ES++ + K RD R S+DG R+R
Sbjct: 159 SRTHKDKEDRRISEIKDRST-SRERKIKEESKDEEN-KPRDKDREREKSKDGDRER---- 212
Query: 99 WEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDRE---KDKEKEREKSH 155
+D DRD+ G+D RDR ++R ++ER+ + RD++ KD+E ER+K
Sbjct: 213 --------HKDPDRDK----GKDVERDRNKNRVKQEREREKSRDKDRGNKDRELERDKER 260
Query: 156 R 156
+
Sbjct: 261 K 261
>gi|195135387|ref|XP_002012114.1| GI16794 [Drosophila mojavensis]
gi|193918378|gb|EDW17245.1| GI16794 [Drosophila mojavensis]
Length = 1128
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 31/201 (15%)
Query: 25 ANGDGNVKSEDRVRSRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHR 84
A D + +E+ VR RS++ + D+K R++S RR++RD S
Sbjct: 353 AAEDNDTPAENPVRGRSTERRKDKKSR--------------RNDSSTDSRREKRDKST-- 396
Query: 85 SWSRDGGRDRPRSSWEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDRE 144
R PR E R ER R+R ++ R+R R + R+ R R + R +E
Sbjct: 397 -------RTPPRRETEKPTRSKERQRERSKQRLGSRERQRSKDARRNERHRSKERQRSKE 449
Query: 145 KDKEKEREKS---HRSGS-QSERYRSDRDERERSRDRE-VIERERSRDREVIERERSRDR 199
+ K K+R +S H+S Q + R ER+RS++R+ ER+RS++R + +ER R +
Sbjct: 450 RLKSKDRARSMERHKSKERQQSKERQRPKERQRSKERQRSKERQRSKER-LRSKERVRSK 508
Query: 200 EVI-ERERSRDRELKEREKER 219
E + +ER+R +E ++R KER
Sbjct: 509 ERLRSKERARSKE-RQRSKER 528
>gi|395851493|ref|XP_003798288.1| PREDICTED: TRAF3-interacting protein 1 isoform 1 [Otolemur
garnettii]
Length = 695
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 103 DRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSE 162
DRD +D +RDR R+ R++ + R ++ER+ D DR +E D+EKEREK G + E
Sbjct: 208 DRDRHKDAERDRH----REGEREKSKGRAKQERERDRDRGKELDREKEREKKSEGGKEKE 263
>gi|223647752|gb|ACN10634.1| WD repeat-containing protein 60 [Salmo salar]
Length = 1090
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 19/156 (12%)
Query: 103 DRDTERDRDRDR---EERNGRDRNRDRGRDRDRR----ERDHDTDRDREKD---KEKERE 152
+RD+ER DRDR EER R+RDRG DR++R ER++ + +R KD K+KER+
Sbjct: 184 ERDSERRSDRDRKRNEERAEGGRDRDRGHDREKRDGHKEREYVKESERYKDRSQKDKERK 243
Query: 153 KSH----RSGSQSERYRSDRDERERSRDREVIERERSRDREVIERERSRDREVIERERSR 208
+ H SG + ER ++ +E+ + D R REV ERER
Sbjct: 244 ERHTDKEHSGQKEEREYREQHGKEKEERERRHKERAQHDTGESRRHGGESREV-ERERVH 302
Query: 209 DRELKEREKERESRDNDKESRRPKEKKEQVEPEVDP 244
RE K + ERE + ++ R + +E+ PE+DP
Sbjct: 303 -RERKGPDGEREGK---RDKHRERRHREEAGPEMDP 334
>gi|357441861|ref|XP_003591208.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
gi|355480256|gb|AES61459.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
Length = 936
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 102 RDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDK--EKEREKSHRSGS 159
RD+ ER++ RDRE + RD +RD+G+D+ R ER+ D ++DR +D+ K E+ + SG+
Sbjct: 143 RDKGKEREKHRDRE--SYRDGDRDKGKDKIREERESDREKDRSRDRGSRKAHEEDYESGN 200
Query: 160 QSER--YRSDRDE 170
+R Y RDE
Sbjct: 201 LDDRVDYHEKRDE 213
>gi|395851495|ref|XP_003798289.1| PREDICTED: TRAF3-interacting protein 1 isoform 2 [Otolemur
garnettii]
Length = 629
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 103 DRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSE 162
DRD +D +RDR R+ R++ + R ++ER+ D DR +E D+EKEREK G + E
Sbjct: 208 DRDRHKDAERDRH----REGEREKSKGRAKQERERDRDRGKELDREKEREKKSEGGKEKE 263
>gi|409074961|gb|EKM75348.1| hypothetical protein AGABI1DRAFT_46641 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 579
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNAL 410
++++ V NL ++ + L ++FE G VEL ++ D T KG G VQFA++ +A A+
Sbjct: 480 SQQIMVRNLPWSTANEDLVELFETTGQVELAEILFDGT-RSKGCGVVQFAQIVEAETAI 537
>gi|126314557|ref|XP_001362270.1| PREDICTED: TRAF3-interacting protein 1 isoform 2 [Monodelphis
domestica]
Length = 648
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 21/121 (17%)
Query: 39 SRSSKCKSDEKVEDYDDDGHRSRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSS 98
SR+ K K D ++ + D SR K ++ES++ + K RD R S+DG R+R
Sbjct: 159 SRTHKDKEDRRISEIKDRST-SRERKIKEESKDEEN-KPRDKDREREKSKDGDRER---- 212
Query: 99 WEHRDRDTERDRDRDREERNGRDRNRDRGRDRDRRERDHDTDRDRE---KDKEKEREKSH 155
+D DRD+ G+D RDR ++R ++ER+ + RD++ KD+E ER+K
Sbjct: 213 --------HKDPDRDK----GKDVERDRNKNRVKQEREREKSRDKDRGNKDRELERDKER 260
Query: 156 R 156
+
Sbjct: 261 K 261
>gi|357138246|ref|XP_003570708.1| PREDICTED: uncharacterized protein LOC100825209 [Brachypodium
distachyon]
Length = 806
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 14/100 (14%)
Query: 106 TERDRDRDREERNGRDRNRDRGRDRDR-RERDHDTDRDREKDKEKEREKSHRSGSQSERY 164
TER+RD+++E R+ RD+ R+R RD+D+ +ER DR+REK + K+R+ + S
Sbjct: 90 TERERDKEKERRD-RDKERNRNRDKDKEKERPEKEDREREKSRGKDRQDADLS------- 141
Query: 165 RSDRDERERSRD--REVIERERSRDREVIER---ERSRDR 199
+SD ++++ D RE + S RE IER ER +D+
Sbjct: 142 KSDEGDQKKGVDPPREAEQTSTSTLRERIERAKEERWKDK 181
>gi|403419131|emb|CCM05831.1| predicted protein [Fibroporia radiculosa]
Length = 564
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 352 ARRLYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALN 411
++++ V NL ++ + L ++FE G VEL ++ L E KG G VQF ++++A A+
Sbjct: 465 SQQIMVRNLPWSTANEDLVELFETTGQVELAEI-LFEGTRSKGCGVVQFGQVQEAETAIA 523
Query: 412 LNGQLEIVGRAIKV 425
Q GR + V
Sbjct: 524 KFQQYMYGGRPLDV 537
>gi|301613640|ref|XP_002936322.1| PREDICTED: hypothetical protein LOC100488725 [Xenopus (Silurana)
tropicalis]
Length = 1382
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 76/157 (48%), Gaps = 16/157 (10%)
Query: 60 SRGSKSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRS--SWEHRDRDTERDRDRDREER 117
S+ + RDE DR ++ S R DRPR S E R RD DR R+ER
Sbjct: 736 SKEDRPRDERSKEDRPRDERSKEDRPRDERSKEDRPRDERSKEDRPRDERLKEDRPRDER 795
Query: 118 NGRDRNRDRGRDRDRRERDHDTDRDREKDKEKEREKSHRSGSQSERYRSDRDERERSRDR 177
DR RD R ++ R RD DR +D ER K R + ER + DR ER
Sbjct: 796 LKEDRPRDE-RLKEDRPRDERLKEDRPRD---ERLKEDRP--RDERLKEDRPRDER---- 845
Query: 178 EVIERERSRDREVIERERSRDREVIERERSRDRELKE 214
++ +R RD E ++ +R RD E ++ +R RD LKE
Sbjct: 846 --LKEDRPRD-ERLKEDRPRD-ERLKEDRPRDERLKE 878
>gi|348500896|ref|XP_003438007.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Oreochromis
niloticus]
Length = 461
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 63/149 (42%), Gaps = 36/149 (24%)
Query: 64 KSRDESRNHDRRKERDSSCHRSWSRDGGRDRPRSSW--EHRDRDTERDRDRDREERNGRD 121
+ R S + DRR ER RDGG DR + H+DR TER+R RD++ R D
Sbjct: 318 RKRSHSGSRDRRSERKEK-----ERDGGDDRSKRKDRDHHKDRGTERERSRDKKSRGETD 372
Query: 122 RNR---DRGRDRD--------------------------RRERDHDTDRDREKDKEKERE 152
R DR R RD +RER H +RDRE+D E+
Sbjct: 373 DRRHKDDRERHRDERKAKRSSRSRSRERRHKSGAEEKSRKRERSHSRERDRERDGEQRSH 432
Query: 153 KSHRSGSQSERYRSDRDERERSRDREVIE 181
K RS +S R ++ R R IE
Sbjct: 433 KRSRSKERSHHQRESSNDHSRHRRSPSIE 461
>gi|413921103|gb|AFW61035.1| putative nucleolin-like family protein [Zea mays]
Length = 654
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 355 LYVGNLHFNMTEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLEDARNALNLNG 414
L++GN+ + D +++ FE G V V+ P + G+ KGF +V+F E A A
Sbjct: 391 LFMGNVPWKAEFDDVKEFFEDVGEVVDVRFPTHDDGNRKGFCYVEFVSAEAAAKAYKEKQ 450
Query: 415 QLEIVGRAIKV 425
E+ GR +++
Sbjct: 451 SKELHGREVRL 461
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,525,794,963
Number of Sequences: 23463169
Number of extensions: 503153135
Number of successful extensions: 6219016
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 37107
Number of HSP's successfully gapped in prelim test: 66319
Number of HSP's that attempted gapping in prelim test: 3062599
Number of HSP's gapped (non-prelim): 1015569
length of query: 639
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 490
effective length of database: 8,863,183,186
effective search space: 4342959761140
effective search space used: 4342959761140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)