BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006610
(639 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O25225|TYPA_HELPY GTP-binding protein TypA/BipA homolog OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=typA PE=3 SV=1
Length = 599
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/587 (45%), Positives = 381/587 (64%), Gaps = 21/587 (3%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTGIS 115
+RN+AVIAHVDHGKTTL+D LL Q G + ER MDS LERERGITI SK T I
Sbjct: 4 IRNIAVIAHVDHGKTTLVDGLLSQSGTFSEREKVDERVMDSNDLERERGITILSKNTAIY 63
Query: 116 WRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPI 175
+++ ++N++DTPGHADFGGEVERV+ MV+G +L+VDA EG + QTKFV+ KAL +G+ PI
Sbjct: 64 YKDTKINIIDTPGHADFGGEVERVLKMVDGVLLLVDAQEGVMPQTKFVVKKALSFGICPI 123
Query: 176 LLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTFTKDP 234
+++NK+D+PA +R DEV FDLF +GA+D+QLDFPV+YA+A++G+A + +
Sbjct: 124 VVVNKIDKPAAEPDRVVDEV----FDLFVAMGASDKQLDFPVVYAAARDGYAMKSLDDEK 179
Query: 235 PADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVGDK 294
+N+ L + I+ HVP P S+D P QM + ++ D Y+G+I RV +G V +
Sbjct: 180 ----KNLEPLFETILEHVPSPSGSVDEPLQMQIFTLDYDNYVGKIGIARVFNGSVKKNES 235
Query: 295 VHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVANTE 354
V L + G++ E G++TKL+ G I++A AGDI+++AG +G +V +
Sbjct: 236 V--LLMKSDGSK--ENGRITKLIGFLGLARTEIENAYAGDIVAIAGFNAMDVGDSVVDPA 291
Query: 355 VTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGMA 414
L + L+ PT+S+ F VNDSPLAG +G H+T K+ RL+ E +TN+A+
Sbjct: 292 NPMPLDPMHLEEPTMSVYFAVNDSPLAGLEGKHVTANKLKDRLLKEMQTNIAMKCEEMGE 351
Query: 415 ETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIE----LLS 470
++V GRGELQ+ IL EN+RREGFE S+S P+V+ K ENGVK EP E + I+
Sbjct: 352 GKFKVSGRGELQITILAENLRREGFEFSISRPEVIIKEENGVKCEPFEHLVIDTPQDFSG 411
Query: 471 LCIWYLSSLRFCFRLTRNMWGWLWKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAFLKYE 530
I L + + M +L RGL+GYRS F +DT+G G M+ +FL++
Sbjct: 412 AIIERLGKRKAEMKAMNPMSDGYTRLEFEIPARGLIGYRSEFLTDTKGEGVMNHSFLEFR 471
Query: 531 KHRGLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSRDTDLD 590
G + + + G L+SM G TA +L +++ RG LF+ P T+ Y GM+IGEHSRD DLD
Sbjct: 472 PFSGSVESRKNGALISMENGEATAFSLFNIQERGTLFINPQTKVYVGMVIGEHSRDNDLD 531
Query: 591 VNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEAS 637
VNP+++K L+N+RA+G D+ +KLTPPR M LE A+ ++ DE++E +
Sbjct: 532 VNPIKSKHLTNMRASGSDDAIKLTPPRTMVLERALEWIEEDEILEVT 578
>sp|Q9ZLZ3|TYPA_HELPJ GTP-binding protein TypA/BipA homolog OS=Helicobacter pylori
(strain J99) GN=typA PE=3 SV=1
Length = 599
Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/587 (44%), Positives = 381/587 (64%), Gaps = 21/587 (3%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTGIS 115
+RN+AVIAHVDHGKTTL+D LL Q G + ER MDS LE+ERGITI SK T I
Sbjct: 4 IRNIAVIAHVDHGKTTLVDGLLSQSGTFSEREKVDERVMDSNDLEKERGITILSKNTAIY 63
Query: 116 WRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPI 175
+++ ++N++DTPGHADFGGEVERV+ MV+G +L+VDA EG + QTKFV+ KAL +G+ PI
Sbjct: 64 YKDTKINIIDTPGHADFGGEVERVLKMVDGVLLLVDAQEGVMPQTKFVVKKALSFGICPI 123
Query: 176 LLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTFTKDP 234
+++NK+D+PA +R DEV FDLF +GA+D+QLDFPV+YA+A++G+A + +
Sbjct: 124 VVVNKIDKPAAEPDRVVDEV----FDLFVAMGASDKQLDFPVVYAAARDGYAMKSLDDEK 179
Query: 235 PADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVGDK 294
+N+ L + I+ HVP P S+D P QM + ++ D Y+G+I RV +G V +
Sbjct: 180 ----KNLEPLFETILEHVPSPSGSVDEPLQMQIFTLDYDNYVGKIGIARVFNGSVKKNES 235
Query: 295 VHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVANTE 354
V L + G++ E G++TKL+ G I++A AGDI+++AG +G +V +
Sbjct: 236 V--LLMKSDGSK--ENGRITKLIGFLGLARTEIENAYAGDIVALAGFNAMDVGDSVVDPT 291
Query: 355 VTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGMA 414
L + L+ PT+S+ F VNDSPLAG +G H+T K+ RL+ E +TN+A+
Sbjct: 292 NPMPLDPMHLEEPTMSVYFAVNDSPLAGLEGKHVTANKLKDRLLKEMQTNIAMKCEEMGE 351
Query: 415 ETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIE----LLS 470
++V GRGELQ+ IL EN+RREGFE S+S P+V+ K ENGVK EP E + I+
Sbjct: 352 GKFKVSGRGELQITILAENLRREGFEFSISRPEVIIKEENGVKCEPFEHLVIDTPQDFSG 411
Query: 471 LCIWYLSSLRFCFRLTRNMWGWLWKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAFLKYE 530
I L + + M +L RGL+GYRS F +DT+G G M+ +FL++
Sbjct: 412 AIIERLGKRKAEMKAMNPMSDGYTRLEFEIPARGLIGYRSEFLTDTKGEGVMNHSFLEFR 471
Query: 531 KHRGLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSRDTDLD 590
G + + + G L+SM G TA +L +++ RG LF+ P T+ Y GM+IGEHSRD DLD
Sbjct: 472 PFSGSVESRKNGALISMENGEATAFSLFNIQERGALFINPQTKVYVGMVIGEHSRDNDLD 531
Query: 591 VNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEAS 637
VNP+++K L+N+RA+G D+ +KLTPPR M LE A+ ++ DE++E +
Sbjct: 532 VNPIKSKHLTNMRASGSDDAIKLTPPRTMVLERALEWIEEDEILEVT 578
>sp|P72749|TYPA_SYNY3 GTP-binding protein TypA/BipA homolog OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=typA PE=3 SV=1
Length = 597
Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/590 (44%), Positives = 369/590 (62%), Gaps = 26/590 (4%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCG-----ADIPHERAMDSISLERERGITIASKVTGI 114
+RNVA+IAHVDHGKTTL+D LL+Q G D+P MDS LERERGITI SK T +
Sbjct: 5 IRNVAIIAHVDHGKTTLVDALLKQSGIFREGEDVPV-CVMDSNDLERERGITILSKNTAV 63
Query: 115 SWRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP 174
+++ +N+VDTPGHADFGGEVERV+GMV+G +L+VDA EGP+ QT+FVL KAL+ GLRP
Sbjct: 64 RYQDTLINIVDTPGHADFGGEVERVLGMVDGCVLIVDANEGPMPQTRFVLKKALEKGLRP 123
Query: 175 ILLLNKVDRPAVSEERCDEVESL--VFDLFANLGATDEQLDFPVLYASAKEGWASSTFTK 232
++++NK+DRP R D ++ VFDLF LGA D+Q DF L+AS G+A +
Sbjct: 124 LVVVNKIDRP-----RADPNTAVDKVFDLFVELGADDDQCDFTTLFASGLGGFAKESLDD 178
Query: 233 DPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVG 292
D +M L +AI+ HVPPP + P Q+ VT ++ YLGRI+ GR+ +G V G
Sbjct: 179 DS----EDMKPLFEAILHHVPPPAGDPNKPLQLQVTTLDYSDYLGRIIIGRIHNGTVKAG 234
Query: 293 DKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVAN 352
+ + + G+ I +GKV+KL+ +G + + A AG I+++AG +IG T+
Sbjct: 235 QQ--AALVKEDGS--IAKGKVSKLLGFEGLNRIELPEASAGYIVAIAGFADANIGETLTC 290
Query: 353 TEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPG 412
+ ALP I++D PT+ MTF VNDSP AG++G +T +I RL E ETN+A+ V G
Sbjct: 291 PDEPQALPLIKVDEPTLQMTFSVNDSPFAGQEGKFVTSRQIRDRLNRELETNVALRVEDG 350
Query: 413 -MAETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEL--- 468
AE + V GRGEL LGILIE MRREG+E V+ P+V+Y+ NG EP+E + +++
Sbjct: 351 ESAEQFLVSGRGELHLGILIETMRREGYEFQVAQPQVIYREVNGQPCEPVEYLVLDVPEA 410
Query: 469 -LSLCIWYLSSLRFCFRLTRNMWGWLWKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAFL 527
+ CI L R + + +L RGL+G+R F TRG G M+ +FL
Sbjct: 411 AVGACIERLGQRRGEMQDMQTSVNGRTQLEFVIPARGLLGFRGDFIRITRGEGIMNHSFL 470
Query: 528 KYEKHRGLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSRDT 587
+Y G L GV+V+ G T +A+ + E RG+ F+ PGT+ Y GMIIGEH+R
Sbjct: 471 EYRPMSGDLETRYNGVMVAFEEGVATFYAMKNAEDRGVFFITPGTKVYKGMIIGEHNRPQ 530
Query: 588 DLDVNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEAS 637
D+++N + K+L+N R+A DE V+L P M LE A+ Y+ DEL+E +
Sbjct: 531 DIELNVCKTKQLTNHRSATGDELVQLQAPEDMNLERALEYIGPDELVEIT 580
>sp|O07631|TYPA_BACSU GTP-binding protein TypA/BipA homolog OS=Bacillus subtilis (strain
168) GN=typA PE=3 SV=1
Length = 612
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 266/589 (45%), Positives = 377/589 (64%), Gaps = 23/589 (3%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTGIS 115
LRN+A+IAHVDHGKTTL+D+LL Q G + ERAMDS LERERGITI +K T I+
Sbjct: 7 LRNIAIIAHVDHGKTTLVDQLLHQAGTFRANEQVAERAMDSNDLERERGITILAKNTAIN 66
Query: 116 WRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPI 175
+++ +N++DTPGHADFGGEVER++ MV+G +LVVDA EG + QT+FVL KAL+ L P+
Sbjct: 67 YKDTRINILDTPGHADFGGEVERIMKMVDGVVLVVDAYEGCMPQTRFVLKKALEQNLNPV 126
Query: 176 LLLNKVDRP-AVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTFTKDP 234
+++NK+DR A EE DE V DLF L A +EQL+FPV+YASA G AS DP
Sbjct: 127 VVVNKIDRDFARPEEVIDE----VLDLFIELDANEEQLEFPVVYASAINGTASL----DP 178
Query: 235 PADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVGDK 294
NM L + II+HVP P + + P Q V +++ + Y+GRI GRV G + VG +
Sbjct: 179 KQQDENMEALYETIIKHVPAPVDNAEEPLQFQVALLDYNDYVGRIGIGRVFRGTMKVGQQ 238
Query: 295 VHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVANTE 354
V +++ GT K +VTK+ +G V I+ A AGD+++V+GM ++G TV +
Sbjct: 239 VSLMKL--DGTAK--SFRVTKIFGFQGLKRVEIEEAKAGDLVAVSGMEDINVGETVCPVD 294
Query: 355 VTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGMA 414
LP + +D PT+ MTF VN+SP AGR+G ++T KI RL S+ +T++++ V P +
Sbjct: 295 HQDPLPVLRIDEPTLQMTFVVNNSPFAGREGKYVTARKIEERLQSQLQTDVSLRVEPTAS 354
Query: 415 -ETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEL----L 469
+ + V GRGEL L ILIENMRREG+EL VS P+V+ K +GV+ EP+E V I++
Sbjct: 355 PDAWVVSGRGELHLSILIENMRREGYELQVSKPEVIIKEIDGVRCEPVERVQIDVPEEHT 414
Query: 470 SLCIWYLSSLRFCFRLTRNMWGWLWKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAFLKY 529
+ + + + N +L T RGL+GY + F S TRG G ++ F Y
Sbjct: 415 GSVMESMGARKGEMVDMINNGNGQVRLIFTVPSRGLIGYSTEFLSLTRGFGILNHTFDSY 474
Query: 530 EKHR-GLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSRDTD 588
+ + G +G R+GVLVSM G T++ + +E RG++FV PGTE Y+GMI+GEH+RD D
Sbjct: 475 QPMQAGQVGGRRQGVLVSMENGKATSYGIQGIEDRGVIFVEPGTEVYEGMIVGEHNRDND 534
Query: 589 LDVNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEAS 637
L VN + K+ +NVR+A KD+ + R+M+LEE++ Y+ DE E +
Sbjct: 535 LVVNVSKMKQQTNVRSATKDQTTTIKKARIMSLEESLEYLNEDEYCEVT 583
>sp|P0A3B4|TYPA_SHIFL GTP-binding protein TypA/BipA OS=Shigella flexneri GN=typA PE=3
SV=1
Length = 607
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/591 (45%), Positives = 362/591 (61%), Gaps = 21/591 (3%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTGI 114
+LRN+A+IAHVDHGKTTL+D+LL+Q G ER MDS LE+ERGITI +K T I
Sbjct: 4 KLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAI 63
Query: 115 SWRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP 174
W + +N+VDTPGHADFGGEVERV+ MV+ +LVVDA +GP+ QT+FV KA YGL+P
Sbjct: 64 KWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKP 123
Query: 175 ILLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTFTKDP 234
I+++NKVDRP R D V VFDLF NL ATDEQLDFP++YASA G A D
Sbjct: 124 IVVINKVDRPGA---RPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGL----DH 176
Query: 235 PADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVGDK 294
+M+ L AI+ HVP P LD PFQM ++ ++ + Y+G I GR+ G V +
Sbjct: 177 EDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQ 236
Query: 295 VHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVANTE 354
V I DS K KV K++ G + D A AGDI+++ G+ + +I TV +T+
Sbjct: 237 V---TIIDS-EGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQ 292
Query: 355 VTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM- 413
ALP + +D PT+SM F VN SP G++G +T +I RL E N+A+ V
Sbjct: 293 NVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETED 352
Query: 414 AETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIELLSL-- 471
A+ + V GRGEL L +LIENMRREGFEL+VS PKV+++ +G K EP E VT+++
Sbjct: 353 ADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQ 412
Query: 472 --CIWYLSSLRFCFRLTRNMWGWLWKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAFLKY 529
+ L + + +L RGL+G+RS F + T GTG ++ F Y
Sbjct: 413 GSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHY 472
Query: 530 EKHR-GLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSRDTD 588
+ R G +G + GVL+S G G A AL L+ RG LF+ G E Y+G IIG HSR D
Sbjct: 473 DDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSND 532
Query: 589 LDVNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEASCT 639
L VN + K+L+N+RA+G DE V L PP MTLE+A+ ++ DEL+E + T
Sbjct: 533 LTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPT 583
>sp|P32132|TYPA_ECOLI GTP-binding protein TypA/BipA OS=Escherichia coli (strain K12)
GN=typA PE=1 SV=2
Length = 607
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/591 (45%), Positives = 362/591 (61%), Gaps = 21/591 (3%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTGI 114
+LRN+A+IAHVDHGKTTL+D+LL+Q G ER MDS LE+ERGITI +K T I
Sbjct: 4 KLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAI 63
Query: 115 SWRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP 174
W + +N+VDTPGHADFGGEVERV+ MV+ +LVVDA +GP+ QT+FV KA YGL+P
Sbjct: 64 KWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKP 123
Query: 175 ILLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTFTKDP 234
I+++NKVDRP R D V VFDLF NL ATDEQLDFP++YASA G A D
Sbjct: 124 IVVINKVDRPGA---RPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGL----DH 176
Query: 235 PADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVGDK 294
+M+ L AI+ HVP P LD PFQM ++ ++ + Y+G I GR+ G V +
Sbjct: 177 EDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQ 236
Query: 295 VHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVANTE 354
V I DS K KV K++ G + D A AGDI+++ G+ + +I TV +T+
Sbjct: 237 V---TIIDS-EGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQ 292
Query: 355 VTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM- 413
ALP + +D PT+SM F VN SP G++G +T +I RL E N+A+ V
Sbjct: 293 NVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETED 352
Query: 414 AETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIELLSL-- 471
A+ + V GRGEL L +LIENMRREGFEL+VS PKV+++ +G K EP E VT+++
Sbjct: 353 ADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQ 412
Query: 472 --CIWYLSSLRFCFRLTRNMWGWLWKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAFLKY 529
+ L + + +L RGL+G+RS F + T GTG ++ F Y
Sbjct: 413 GSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHY 472
Query: 530 EKHR-GLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSRDTD 588
+ R G +G + GVL+S G G A AL L+ RG LF+ G E Y+G IIG HSR D
Sbjct: 473 DDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSND 532
Query: 589 LDVNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEASCT 639
L VN + K+L+N+RA+G DE V L PP MTLE+A+ ++ DEL+E + T
Sbjct: 533 LTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPT 583
>sp|P0A3B1|TYPA_ECOL6 GTP-binding protein TypA/BipA OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=typA PE=3 SV=1
Length = 607
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/591 (45%), Positives = 362/591 (61%), Gaps = 21/591 (3%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTGI 114
+LRN+A+IAHVDHGKTTL+D+LL+Q G ER MDS LE+ERGITI +K T I
Sbjct: 4 KLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAI 63
Query: 115 SWRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP 174
W + +N+VDTPGHADFGGEVERV+ MV+ +LVVDA +GP+ QT+FV KA YGL+P
Sbjct: 64 KWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKP 123
Query: 175 ILLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTFTKDP 234
I+++NKVDRP R D V VFDLF NL ATDEQLDFP++YASA G A D
Sbjct: 124 IVVINKVDRPGA---RPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGL----DH 176
Query: 235 PADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVGDK 294
+M+ L AI+ HVP P LD PFQM ++ ++ + Y+G I GR+ G V +
Sbjct: 177 EDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQ 236
Query: 295 VHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVANTE 354
V I DS K KV K++ G + D A AGDI+++ G+ + +I TV +T+
Sbjct: 237 V---TIIDS-EGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQ 292
Query: 355 VTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM- 413
ALP + +D PT+SM F VN SP G++G +T +I RL E N+A+ V
Sbjct: 293 NVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETED 352
Query: 414 AETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIELLSL-- 471
A+ + V GRGEL L +LIENMRREGFEL+VS PKV+++ +G K EP E VT+++
Sbjct: 353 ADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQ 412
Query: 472 --CIWYLSSLRFCFRLTRNMWGWLWKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAFLKY 529
+ L + + +L RGL+G+RS F + T GTG ++ F Y
Sbjct: 413 GSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHY 472
Query: 530 EKHR-GLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSRDTD 588
+ R G +G + GVL+S G G A AL L+ RG LF+ G E Y+G IIG HSR D
Sbjct: 473 DDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSND 532
Query: 589 LDVNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEASCT 639
L VN + K+L+N+RA+G DE V L PP MTLE+A+ ++ DEL+E + T
Sbjct: 533 LTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPT 583
>sp|P0A3B3|TYPA_ECO57 GTP-binding protein TypA/BipA OS=Escherichia coli O157:H7 GN=typA
PE=3 SV=1
Length = 607
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/591 (45%), Positives = 362/591 (61%), Gaps = 21/591 (3%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTGI 114
+LRN+A+IAHVDHGKTTL+D+LL+Q G ER MDS LE+ERGITI +K T I
Sbjct: 4 KLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAI 63
Query: 115 SWRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP 174
W + +N+VDTPGHADFGGEVERV+ MV+ +LVVDA +GP+ QT+FV KA YGL+P
Sbjct: 64 KWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKP 123
Query: 175 ILLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTFTKDP 234
I+++NKVDRP R D V VFDLF NL ATDEQLDFP++YASA G A D
Sbjct: 124 IVVINKVDRPGA---RPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGL----DH 176
Query: 235 PADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVGDK 294
+M+ L AI+ HVP P LD PFQM ++ ++ + Y+G I GR+ G V +
Sbjct: 177 EDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQ 236
Query: 295 VHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVANTE 354
V I DS K KV K++ G + D A AGDI+++ G+ + +I TV +T+
Sbjct: 237 V---TIIDS-EGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQ 292
Query: 355 VTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM- 413
ALP + +D PT+SM F VN SP G++G +T +I RL E N+A+ V
Sbjct: 293 NVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETED 352
Query: 414 AETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIELLSL-- 471
A+ + V GRGEL L +LIENMRREGFEL+VS PKV+++ +G K EP E VT+++
Sbjct: 353 ADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQ 412
Query: 472 --CIWYLSSLRFCFRLTRNMWGWLWKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAFLKY 529
+ L + + +L RGL+G+RS F + T GTG ++ F Y
Sbjct: 413 GSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHY 472
Query: 530 EKHR-GLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSRDTD 588
+ R G +G + GVL+S G G A AL L+ RG LF+ G E Y+G IIG HSR D
Sbjct: 473 DDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSND 532
Query: 589 LDVNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEASCT 639
L VN + K+L+N+RA+G DE V L PP MTLE+A+ ++ DEL+E + T
Sbjct: 533 LTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPT 583
>sp|P0A3B2|TYPA_ECO27 GTP-binding protein TypA/BipA OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=typA PE=3 SV=1
Length = 607
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/591 (45%), Positives = 362/591 (61%), Gaps = 21/591 (3%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTGI 114
+LRN+A+IAHVDHGKTTL+D+LL+Q G ER MDS LE+ERGITI +K T I
Sbjct: 4 KLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAI 63
Query: 115 SWRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRP 174
W + +N+VDTPGHADFGGEVERV+ MV+ +LVVDA +GP+ QT+FV KA YGL+P
Sbjct: 64 KWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKP 123
Query: 175 ILLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTFTKDP 234
I+++NKVDRP R D V VFDLF NL ATDEQLDFP++YASA G A D
Sbjct: 124 IVVINKVDRPGA---RPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGL----DH 176
Query: 235 PADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVGDK 294
+M+ L AI+ HVP P LD PFQM ++ ++ + Y+G I GR+ G V +
Sbjct: 177 EDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQ 236
Query: 295 VHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVANTE 354
V I DS K KV K++ G + D A AGDI+++ G+ + +I TV +T+
Sbjct: 237 V---TIIDS-EGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQ 292
Query: 355 VTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM- 413
ALP + +D PT+SM F VN SP G++G +T +I RL E N+A+ V
Sbjct: 293 NVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETED 352
Query: 414 AETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIELLSL-- 471
A+ + V GRGEL L +LIENMRREGFEL+VS PKV+++ +G K EP E VT+++
Sbjct: 353 ADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQ 412
Query: 472 --CIWYLSSLRFCFRLTRNMWGWLWKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAFLKY 529
+ L + + +L RGL+G+RS F + T GTG ++ F Y
Sbjct: 413 GSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHY 472
Query: 530 EKHR-GLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSRDTD 588
+ R G +G + GVL+S G G A AL L+ RG LF+ G E Y+G IIG HSR D
Sbjct: 473 DDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSND 532
Query: 589 LDVNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEASCT 639
L VN + K+L+N+RA+G DE V L PP MTLE+A+ ++ DEL+E + T
Sbjct: 533 LTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPT 583
>sp|P44910|TYPA_HAEIN GTP-binding protein TypA/BipA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=typA PE=1
SV=1
Length = 616
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/598 (43%), Positives = 375/598 (62%), Gaps = 26/598 (4%)
Query: 53 STLDPGRLRNVAVIAHVDHGKTTLMDRLLRQCG------ADIPHERAMDSISLERERGIT 106
+ +D +LRN+A+IAHVDHGKTTL+D+LL+Q G D+ ER MDS LE+ERGIT
Sbjct: 3 NEIDIKKLRNIAIIAHVDHGKTTLVDKLLQQSGTFESARGDV-DERVMDSNDLEKERGIT 61
Query: 107 IASKVTGISWRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAK 166
I +K T I+W + +N+VDTPGHADFGGEVERV+ MV+ +LVVDA +GP+ QT+FV K
Sbjct: 62 ILAKNTAINWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQK 121
Query: 167 ALKYGLRPILLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWA 226
A +GL+PI+++NKVDRP R D V VFDLF NLGA+DEQLDFP++YASA G A
Sbjct: 122 AFAHGLKPIVVINKVDRPGA---RPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVA 178
Query: 227 SSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSS 286
+D D M+ L +AI++HV PPK LDAPFQM ++ ++ + Y+G I GR+
Sbjct: 179 GLEH-EDLAED---MTPLFEAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKR 234
Query: 287 GVVSVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSI 346
G + V I G K +G++ +++ G D A AGDI+++ G+ + +I
Sbjct: 235 GSIKPNQPV--TIINSEG--KTRQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNI 290
Query: 347 GHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLA 406
T+ + ALP++ +D PT++M F VN SP AG++G ++T +I RL E N+A
Sbjct: 291 SDTICDINTVEALPSLTVDEPTVTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVA 350
Query: 407 INV--IPGMAETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEV 464
+ V P E + V GRGEL L +LIENMRREG+EL+VS PKV+Y+ +G K EP E+V
Sbjct: 351 LRVEETPNPDE-FRVSGRGELHLSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQV 409
Query: 465 TIELLSLCIW-YLSSLRFCFRLTRNMW---GWLWKLSLTGKLRGLVGYRSVFSSDTRGTG 520
TI++ + +L R+M +L RGL+G+R F + T GTG
Sbjct: 410 TIDVEEQHQGSVMEALGIRKGEVRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTG 469
Query: 521 FMHRAFLKYEKHR-GLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMI 579
++ +F Y++ + G +G + GVL+S G +AL L+ RG L + E Y+G I
Sbjct: 470 LLYSSFSHYDEIKGGEIGQRKNGVLISNATGKALGYALFGLQERGKLMIDANIEVYEGQI 529
Query: 580 IGEHSRDTDLDVNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEAS 637
IG HSR DL VN ++ K+L+N+RA+GKD+ + LT P +LE+AI ++ DEL+E +
Sbjct: 530 IGIHSRSNDLTVNCLQGKKLTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVT 587
>sp|Q89AC9|TYPA_BUCBP GTP-binding protein TypA/BipA homolog OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=typA PE=3 SV=2
Length = 611
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/592 (41%), Positives = 362/592 (61%), Gaps = 28/592 (4%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE----RAMDSISLERERGITIASKVTGIS 115
LRN+A+IAHVDHGKTTL+D+LL+Q G HE R MDS LE+ERGITI +K T I
Sbjct: 9 LRNIAIIAHVDHGKTTLVDKLLQQSGTFKKHEEFSERIMDSNDLEKERGITILAKNTAIQ 68
Query: 116 WRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPI 175
W++ +N++DTPGHADFGGEVER++ MV+ +LVVDA EGP+ QT+FV KA YG++PI
Sbjct: 69 WKKYRINIIDTPGHADFGGEVERILSMVDSVLLVVDALEGPMPQTRFVTQKAFSYGIKPI 128
Query: 176 LLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTFTKDPP 235
+++NK+DR R + V +FDLF NL ATDEQLDFP +Y SA G + ++ P
Sbjct: 129 VVINKIDR---KHARPNWVIDQIFDLFVNLNATDEQLDFPTIYTSALLGTSGVSYNHMNP 185
Query: 236 ADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVGDKV 295
+M L +AI+++ PPP + PFQM ++ ++ D YLG I GR++ G V+ +
Sbjct: 186 ----DMIPLYNAIVKYTPPPTVYPNCPFQMQISQLDYDNYLGIIGIGRINKGSVTSNQSI 241
Query: 296 HGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVANTEV 355
+ + TE GK+ K+++ G + I+ A +GDII++ G+ K +I T+ + +
Sbjct: 242 SII----NNTEVKRTGKIGKILQYLGLNKIEINEAQSGDIIAITGIDKLNISDTICDPQY 297
Query: 356 TTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIP-GMA 414
+ALP +++D PT+ M F VN SP +G +G ++T +I RL E N+A+ +
Sbjct: 298 ISALPMLKIDEPTVEMLFSVNKSPFSGTEGKYITSRQIFNRLKKEENYNVALKIKETNDT 357
Query: 415 ETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIELLSLCIW 474
T+ V GRGEL L ILIENMRREGFEL VS P+V+ KT N + EP+E V +++ +
Sbjct: 358 NTFSVSGRGELHLSILIENMRREGFELEVSRPQVILKTINELIQEPMETVVLDIEN---K 414
Query: 475 YLSSLRFCF--------RLTRNMWGWLWKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAF 526
Y ++ +T + +L R L+G+R+ FS+ T G+G + F
Sbjct: 415 YQGTIMKTIGQRKGTISNITPDQNNERTRLDCIISSRSLIGFRTEFSTLTSGSGLFYSTF 474
Query: 527 LKYEK-HRGLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSR 585
Y+K + R GVL++ G +L +L+ RG LF+ GT+ Y+G I+G H+R
Sbjct: 475 SHYQKIESNKIKRHRNGVLIANKTGQAIGFSLFNLQNRGKLFITHGTKVYEGQIVGIHNR 534
Query: 586 DTDLDVNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEAS 637
DL VN + K+L+N+RA+G DE + LT P MTLE AI ++ DEL+E +
Sbjct: 535 VNDLTVNCLSGKKLTNMRASGSDEAITLTTPIKMTLEYAISFINDDELVEIT 586
>sp|P57508|TYPA_BUCAI GTP-binding protein TypA/BipA homolog OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=typA PE=3 SV=1
Length = 607
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/590 (43%), Positives = 354/590 (60%), Gaps = 25/590 (4%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE----RAMDSISLERERGITIASKVTGIS 115
+RN+A+IAHVDHGKTTL+D+LL+Q G HE R MDS LE+ERGITI SK T I
Sbjct: 5 IRNIAIIAHVDHGKTTLLDKLLQQSGTFEEHEEKTERIMDSNDLEKERGITILSKNTSIK 64
Query: 116 WRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPI 175
W ++N+VDTPGHADFGGEVERV+ MV+ +LVVDA +GP+ QT+FV KA KYGL PI
Sbjct: 65 WNNYKINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPI 124
Query: 176 LLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTFTKDPP 235
+++NK+DR R D V VFDLF NL A+DEQLDFP++Y SA G + + +
Sbjct: 125 VVINKIDRI---HSRPDWVVDQVFDLFVNLNASDEQLDFPIIYTSAVLGTSGTDYLNMQ- 180
Query: 236 ADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVGDKV 295
NM L ++II++ P P + D FQM ++ ++ + YLG I GRV G + DKV
Sbjct: 181 ---NNMIPLYESIIKYAPAPNVNSDQKFQMQISQLDYNSYLGVIGVGRVKQGSIKTNDKV 237
Query: 296 HGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVANTEV 355
I D K GKV K++ G + I+ AGDII++ G+ K I T+ + +
Sbjct: 238 ---TIIDR-FGKHRSGKVNKVLNYFGLKRMEINQGYAGDIIAITGLNKLKISDTICHPDN 293
Query: 356 TTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM-A 414
LP + +D PT++M F VN SP +G++G ++T +I RL E N+A+ +
Sbjct: 294 LQPLPALSIDEPTVNMFFSVNTSPFSGKEGKYITSRQILERLKKETMHNVALQIKETKDP 353
Query: 415 ETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIELLSLCIW 474
+ V GRGEL L ILIENMRREGFEL VS PK++++ NG++ EP E VT+++
Sbjct: 354 NIFSVSGRGELHLSILIENMRREGFELEVSRPKIIFREINGIQKEPFENVTLDIEEKNQG 413
Query: 475 YLSSLRFCFRLTRNMWGWL------WKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAFLK 528
S ++F + + +L R L+G+RS F S T GTG + +F
Sbjct: 414 --SVMQFIGIRKGELKNMIPDSKGRVRLEYILSSRALIGFRSEFMSITSGTGLCYSSFSH 471
Query: 529 YEK-HRGLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSRDT 587
Y+ +G + GVL+S G +L +L+ RG LF+ G + Y+G IIG H+R
Sbjct: 472 YDNLQNSNIGQRKNGVLISNSTGMAVGFSLFNLQERGKLFIGHGAQVYEGQIIGLHNRSN 531
Query: 588 DLDVNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEAS 637
DL VN + K+L+N+RA+G DE + LT TLEEAIG++ DEL+E +
Sbjct: 532 DLTVNCLTGKKLTNMRASGTDEAIVLTTAIHFTLEEAIGFINDDELVEVT 581
>sp|Q8K9C8|TYPA_BUCAP GTP-binding protein TypA/BipA homolog OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=typA PE=3 SV=1
Length = 609
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/590 (42%), Positives = 360/590 (61%), Gaps = 25/590 (4%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE----RAMDSISLERERGITIASKVTGIS 115
+RN+A+IAHVDHGKTTL+D+LL+Q G HE R MDS LE+ERGITI SK T I
Sbjct: 5 IRNIAIIAHVDHGKTTLLDQLLQQSGTFQKHEEKKERIMDSNDLEKERGITILSKNTSIK 64
Query: 116 WRENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPI 175
W+E ++N+VDTPGHADFGGEVERV+ MV+ +L+VDA +GP+ QT+FV KA KYGL PI
Sbjct: 65 WKEYKINIVDTPGHADFGGEVERVMSMVDSVLLIVDALDGPMPQTRFVTKKAFKYGLNPI 124
Query: 176 LLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTFTKDPP 235
+++NK+DR R D V + +FDLF NL A D+QLDFP++Y SA G + +
Sbjct: 125 VVINKIDR---KNSRPDWVINEIFDLFVNLNANDKQLDFPIIYTSAILGTSGINY----- 176
Query: 236 ADVR-NMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVSVGDK 294
D++ NM L +AII++ P P + FQM ++ ++ + YLG I GR+ G + D
Sbjct: 177 LDMKENMIPLYEAIIKYAPAPNVDPNQKFQMQISQLDYNNYLGVIGVGRIKQGHIKPNDS 236
Query: 295 VHGLRITDS-GTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTVANT 353
V I DS G + GK+ K++ G + I AGDII++ G+ K +I T+ +
Sbjct: 237 V---VIIDSLGNTR--NGKINKVLNYFGLKRLEIQKGDAGDIIAITGLNKLNISDTICHP 291
Query: 354 EVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM 413
+ LP + +D PT++M F VN SP +G++G ++T +I RL E N+A+ V
Sbjct: 292 DNLCPLPPLIIDEPTVNMFFSVNTSPFSGKEGKYITSRQILERLKKETIHNVALQVKETK 351
Query: 414 -AETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIELLSL- 471
A + V GRGEL L ILIENMRREGFEL VS PK++++ N +K EP E + +++
Sbjct: 352 DANIFSVSGRGELHLSILIENMRREGFELEVSRPKIIFREINDIKQEPFENIILDIEEKH 411
Query: 472 ---CIWYLSSLRFCFRLTRNMWGWLWKLSLTGKLRGLVGYRSVFSSDTRGTGFMHRAFLK 528
+ ++ + + +L R L+G+R+ F S T GTG + +F
Sbjct: 412 QGNIMKFIGERKGELKNITVDPNKRIRLEYLLSSRALIGFRTEFMSITSGTGLFYSSFSH 471
Query: 529 YEKH-RGLLGNVRKGVLVSMGFGSITAHALMSLEPRGILFVPPGTETYDGMIIGEHSRDT 587
Y+K+ + +G + GVL+S G A AL +L+ RG LF+ GT+ Y+G IIG H+R
Sbjct: 472 YQKYQKNDIGQRKNGVLISNSTGMAVAFALFNLQERGKLFLGHGTQVYEGQIIGLHNRSN 531
Query: 588 DLDVNPVRAKELSNVRAAGKDENVKLTPPRLMTLEEAIGYVASDELIEAS 637
DL VN + K+L+N+RA+G DE + LT TLEEA+ ++ DEL+E +
Sbjct: 532 DLTVNCLTGKKLTNMRASGTDEAIILTTFTKFTLEEALSFINDDELVEIT 581
>sp|A0L631|LEPA_MAGSM Elongation factor 4 OS=Magnetococcus sp. (strain MC-1) GN=lepA PE=3
SV=1
Length = 598
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 210/413 (50%), Gaps = 58/413 (14%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERERGITIASKVTGIS 115
+RN ++IAH+DHGK+TL DRL++ GA D+ E+ +DS+ +ERERGITI ++ ++
Sbjct: 6 IRNFSIIAHIDHGKSTLADRLIQFTGALSERDM-KEQVLDSMDIERERGITIKAQSVRLN 64
Query: 116 WRENE-----LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 170
++ + LN++DTPGH DF EV R + EGA+L+VDA +G AQT + AL++
Sbjct: 65 YKAKDGKTYVLNLIDTPGHVDFTYEVSRSLAACEGALLIVDAAQGVEAQTMANVYLALEH 124
Query: 171 GLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASST 229
L I +LNK+D P+ ER +++E ++ L A++ + ASAK G
Sbjct: 125 DLEIIPVLNKIDLPSAEPERVREQIEEVI-----GLDASE------AILASAKSGIG--- 170
Query: 230 FTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVV 289
+ ++L+AI++ VPPPK LDAP + LV D YLG + RV GV+
Sbjct: 171 -----------IEEILEAIVKRVPPPKGDLDAPAKALVVDSWYDNYLGVVSLARVYDGVL 219
Query: 290 SVGDKVHGLRI-TDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISV-AGMTKPS-- 345
G+K+ + + D + + G +T ++ K + AG++ + AG+ K S
Sbjct: 220 KAGEKIRFMGVGMDYPLDNV--GFLTPVLTK-------VAELKAGEVGCIMAGIKKLSDA 270
Query: 346 -IGHTVANTE--VTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAE 402
+G T+ + LP + P SM F P+ D L + +++A
Sbjct: 271 RVGDTITTVRRPCASQLPGFQ---PAKSMVFA-GLYPVDSADYEDLKDA-LEKLAINDAS 325
Query: 403 TNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKTEN 454
N + P + + G L + I+ E + RE +L + P V+Y+ +
Sbjct: 326 LNYEVETSPALGFGFRCGFLGMLHMEIIQERLEREFDLDLVTTAPTVVYRVKQ 378
>sp|Q6D217|LEPA_ERWCT Elongation factor 4 OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=lepA PE=3 SV=1
Length = 599
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 199/416 (47%), Gaps = 58/416 (13%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA---MDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DR+++ CG E A +DS+ LERERGITI ++ + +
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRIIQICGGLTEREMAAQVLDSMDLERERGITIKAQSVTLDY 63
Query: 117 REN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
+ +LN +DTPGH DF EV R + EGA+LVVDAG+G AQT AL
Sbjct: 64 KSQDGQTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTALDMN 123
Query: 172 LRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L + +LNK+D PA +R E+E +V + ATD + SAK G
Sbjct: 124 LEVVPVLNKIDLPAADPDRVAQEIEDIV-----GIDATD------AVRCSAKTGVG---- 168
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
+ +LD ++R +PPP+ S DAP Q L+ D YLG + R+ +G +
Sbjct: 169 ----------VPDILDRLVRDIPPPEGSPDAPLQALIIDSWFDNYLGVVSLVRIKNGTMR 218
Query: 291 VGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDII-SVAGMTKPSIGH- 348
GDK+ + T ++ + K +++ G ++ ++ + +G
Sbjct: 219 KGDKIKVM-----STGQVYNADRLGIFTPKQIDRDVLNCGEVGWLVCAIKDILGAPVGDT 273
Query: 349 -TVANTEVTTALPTI-ELDPPTISMTFGV-NDSPLAGRDGTHLTGGKIG---ARLMSEAE 402
T+A ALP ++ P + F + +D A RD GK+ A L E E
Sbjct: 274 LTLARQPAEKALPGFKKVKPQVYAGLFPISSDDYEAFRDAL----GKLSLNDASLFYEPE 329
Query: 403 TNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKTENGVK 457
++ A+ + G L + I+ E + RE EL + P V+Y+ E K
Sbjct: 330 SSTALGF------GFRCGFLGLLHMEIIQERLEREYDLELITTAPTVVYEVETTAK 379
>sp|A7AQ93|GUF1_BABBO Translation factor GUF1 homolog, mitochondrial OS=Babesia bovis
GN=BBOV_III011750 PE=3 SV=1
Length = 705
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 146/268 (54%), Gaps = 39/268 (14%)
Query: 52 NSTLDPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIA 108
N + R+RN +IAHVDHGK+TL DR L A PHE + +D++ LERERGITI
Sbjct: 99 NEPYNGNRMRNFCIIAHVDHGKSTLADRFLELTKAVEPHEIQGQYLDNMELERERGITIK 158
Query: 109 SKVTGISW------RENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKF 162
+ I + + LN++DTPGH DF E R + EGAILVVD +G AQT
Sbjct: 159 LQSALIKYTYPKDGQVYSLNLIDTPGHIDFNHEARRSIAACEGAILVVDGTKGIQAQTVT 218
Query: 163 VLAKALKYGLRPILLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAK 222
A++ GL+ I ++NK+D P CD ES V DL + ++++ +L ASAK
Sbjct: 219 TSMIAIEAGLKLIPVVNKIDVPF-----CD-YESTVADLTSLFDFSEDE----ILMASAK 268
Query: 223 EGWASSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTG 282
EG+ ++++LDA++ +PPPK +LD PF+ LV + D + G +
Sbjct: 269 EGFG--------------INEILDAVVERIPPPKINLDRPFRALVFDSQYDPHRGVVSYV 314
Query: 283 RVSSGVVSVGDKV----HGL--RITDSG 304
RVS G++ D V H L RIT G
Sbjct: 315 RVSDGIIKKLDDVVFLGHNLESRITAVG 342
>sp|A7I4X4|EF2_METB6 Elongation factor 2 OS=Methanoregula boonei (strain 6A8) GN=fusA
PE=3 SV=1
Length = 731
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 231/479 (48%), Gaps = 88/479 (18%)
Query: 56 DPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA-----MDSISLERERGITI-AS 109
DP +RN+ ++AH+DHGKTTL D LL G I E A MDS + E+ RGITI AS
Sbjct: 17 DPKHIRNIGIVAHIDHGKTTLSDNLLAGAGI-ISEELAGKQLFMDSDAEEQARGITIDAS 75
Query: 110 KVTGISWRENE---LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAK 166
V+ + E + +NM+DTPGH DFGG+V R + V+GA+++VDA EG + QT+ VL +
Sbjct: 76 NVSMVHEVEGQDYLINMIDTPGHVDFGGDVTRAMRAVDGAVVLVDAVEGTMPQTETVLRQ 135
Query: 167 ALKYGLRPILLLNKVDRPAVSEERCDEVE-------------SLVFDLFANLGATDEQLD 213
ALK +RP+L +NKVDR V+E + DE E L+ + +L +LD
Sbjct: 136 ALKEQVRPVLFINKVDR-LVNELKVDETEMQIRLGKVIDKVNKLIKGMNEDLYNNGWKLD 194
Query: 214 FP---VLYASAKEGWASS-------------TFTKDPPADVRNMSQ-------LLDAIIR 250
V + SA WA S F K D++ +++ +LD ++
Sbjct: 195 ASKGTVAFGSALYNWAVSVPYMKKGGVSFKDVFEKCRAGDMKYLAKNSPLYEVVLDMVVH 254
Query: 251 HVPPP---------------------KASL----DAPFQMLVTMMEKDFYLGRILTGRVS 285
H+P P KA L + P M+VT + D + G + TGR+
Sbjct: 255 HLPNPLEAQPRRVNVIWHGDHSTKEGKAMLACDPNGPATMMVTDISFDPHAGEVATGRLF 314
Query: 286 SGVVSVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPS 345
SG + GD GL + S ++ +V M G V ++ AG+I +V G+
Sbjct: 315 SGTLRRGD---GLYVMGSAKKENRLQQVGIFM---GPKRVEVEEIVAGNIAAVTGLKDAI 368
Query: 346 IGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAET-N 404
+G TV + + +++ + MT V + +D L ++ ++ E T
Sbjct: 369 VGSTVTSLMEMSPFESLKHYSEPV-MTVAVEAKNM--KDLPKLV--EVLRQVAKEDPTLG 423
Query: 405 LAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKTENGVKLEPIE 462
+AIN G + + G GEL L I+ ++R+ G E+ S P V+Y+ K+E +E
Sbjct: 424 IAINEETG---EHLISGMGELHLEIVTGRIKRDKGVEIVTSEPIVVYRETVTGKVEDVE 479
>sp|B8HLK8|LEPA_CYAP4 Elongation factor 4 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=lepA PE=3 SV=1
Length = 603
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/413 (31%), Positives = 200/413 (48%), Gaps = 60/413 (14%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCG---ADIPHERAMDSISLERERGITIASKVTGIS 115
R+RN ++IAH+DHGK+TL DRLL+ G A E+ +D++ LERERGITI + ++
Sbjct: 8 RIRNFSIIAHIDHGKSTLADRLLQTTGTVAARDMKEQFLDNMDLERERGITIKLQAARMN 67
Query: 116 WR-----ENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 170
+R E LN++DTPGH DF EV R + EGA+LVVDA +G AQT + AL++
Sbjct: 68 YRGEDGEEYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEH 127
Query: 171 GLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFP-VLYASAKEGWASS 228
L I +LNK+D P ER E+E ++ LD + ASAKEG
Sbjct: 128 NLEIIPVLNKIDLPGAEPERVKQEIEEII------------GLDCSGAVMASAKEGIG-- 173
Query: 229 TFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGV 288
++++L++I+ VPPP+ ++ P + L+ D Y G ++ RV G
Sbjct: 174 ------------IAEILESIVHLVPPPQDTVSEPLRALIFDSYYDPYRGVVVYFRVMDGT 221
Query: 289 VSVGDKVHGLRITDSGTE-KIEEGKVTKLMKKKGTGMVLIDSAGAGDI----ISVAGMTK 343
V GDK+ R+ SG E +I+E V V + AG++ ++ +T
Sbjct: 222 VKQGDKI---RLMASGKEYQIDELGVL------SPAQVQVKELHAGEVGYLAAAIKAVTD 272
Query: 344 PSIGHTV--ANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIG-ARLMSE 400
+G T+ A T LP E P + D+ L ++ A L E
Sbjct: 273 ARVGDTITLATAPAKTPLPGYEEAKPMVFCGMFPTDADQFEDLREALEKLRLNDAALQYE 332
Query: 401 AETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKT 452
ET+ A M + G L + I+ E + RE +L ++ P V+Y+
Sbjct: 333 PETSSA------MGFGFRCGFLGLLHMEIVQERLEREYNLDLIITAPSVVYRV 379
>sp|Q1I5V6|LEPA_PSEE4 Elongation factor 4 OS=Pseudomonas entomophila (strain L48) GN=lepA
PE=3 SV=1
Length = 599
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 192/414 (46%), Gaps = 54/414 (13%)
Query: 56 DPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVT 112
D +RN ++IAH+DHGK+TL DR ++ CG E + +DS+ LERERGITI +
Sbjct: 3 DLSHIRNFSIIAHIDHGKSTLADRFIQMCGGLTAREMEAQVLDSMDLERERGITIKAHSV 62
Query: 113 GISWREN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKA 167
+ ++ +LN +DTPGH DF EV R + EGA+LVVDAG+G AQ+ A
Sbjct: 63 TLHYKAQDGKTYQLNFIDTPGHVDFTYEVSRSLAACEGALLVVDAGQGVEAQSVANCYTA 122
Query: 168 LKYGLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGWA 226
++ GL + +LNK+D P +R DE+E ++ + ATD + SAK G
Sbjct: 123 IEQGLEVMPVLNKMDLPQADPDRVKDEIEKII-----GIDATD------AVACSAKSGMG 171
Query: 227 SSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSS 286
+ ++L+ +++ +P P+ +DAP Q L+ D YLG + RV
Sbjct: 172 --------------VDEVLERLVQSIPAPEGEIDAPLQALIIDSWFDNYLGVVSLVRVRQ 217
Query: 287 GVVSVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDII-SVAGMTKPS 345
G V GDK I T K+ + K T + + G II S+ +
Sbjct: 218 GRVKKGDK-----ILVKSTGKVHLVDSVGVFTPKHTQTADLKAGEVGFIIASIKDIHGAP 272
Query: 346 IGH--TVANTEVTTALPTI-ELDPPTISMTFGVNDSPLAG-RDGTH-LTGGKIGARLMSE 400
+G T++NT LP ++ P + F V+ RD LT + M E
Sbjct: 273 VGDTLTLSNTPEVEVLPGFKKIQPQVYAGLFPVSSDDFEDFRDALQKLTLNDSSLQYMPE 332
Query: 401 AETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKTE 453
+ L G G L + I+ E + RE +L + P V+Y+ E
Sbjct: 333 SSDALGFGFRCGFL--------GMLHMEIIQERLEREYDLDLITTAPSVIYELE 378
>sp|C6DC02|LEPA_PECCP Elongation factor 4 OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=lepA PE=3 SV=1
Length = 599
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 198/416 (47%), Gaps = 58/416 (13%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA---MDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DR+++ CG E A +DS+ LERERGITI ++ + +
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRIIQICGGLTEREMAAQVLDSMDLERERGITIKAQSVTLDY 63
Query: 117 REN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
+ +LN +DTPGH DF EV R + EGA+LVVDAG+G AQT AL
Sbjct: 64 KAQDGQTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTALDMN 123
Query: 172 LRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L + +LNK+D PA +R E+E +V + ATD + SAK G
Sbjct: 124 LEVVPVLNKIDLPAADPDRVAQEIEDIV-----GIDATD------AVRCSAKTGIG---- 168
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
+ +LD ++R +PPP+ S D P Q L+ D YLG + R+ +G +
Sbjct: 169 ----------VPDVLDRLVRDIPPPEGSPDEPLQALIIDSWFDNYLGVVSLVRIKNGTMR 218
Query: 291 VGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDII-SVAGMTKPSIGH- 348
GDK+ + T ++ + K +++ G ++ ++ + +G
Sbjct: 219 KGDKIKVM-----STGQVYNADRLGIFTPKQIDRDVLNCGEVGWLVCAIKDILGAPVGDT 273
Query: 349 -TVANTEVTTALPTI-ELDPPTISMTFGV-NDSPLAGRDGTHLTGGKIG---ARLMSEAE 402
T+A ALP ++ P + F + +D + RD GK+ A L E E
Sbjct: 274 LTLARQPAEKALPGFKKVKPQVYAGLFPISSDDYESFRDAL----GKLSLNDASLFYEPE 329
Query: 403 TNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKTENGVK 457
++ A+ + G L + I+ E + RE +L + P V+Y+ E K
Sbjct: 330 SSTALGF------GFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTAK 379
>sp|Q2RNY6|LEPA_RHORT Elongation factor 4 OS=Rhodospirillum rubrum (strain ATCC 11170 /
NCIB 8255) GN=lepA PE=3 SV=2
Length = 601
Score = 152 bits (384), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 199/423 (47%), Gaps = 57/423 (13%)
Query: 56 DPGRLRNVAVIAHVDHGKTTLMDRLLRQCG---ADIPHERAMDSISLERERGITIASKVT 112
D +RN A+IAH+DHGK+TL DRL++ CG A E+ +DS+ LERERGITI ++
Sbjct: 3 DLSHIRNFAIIAHIDHGKSTLADRLIQTCGGVEARDMKEQLLDSMDLERERGITIKAQTV 62
Query: 113 GISW------RENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAK 166
+ + R +LN++DTPGH DF EV R + EG++LVVDA +G AQT + +
Sbjct: 63 RLHYTAKSDGRTYQLNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYQ 122
Query: 167 ALKYGLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGW 225
A+ G I +LNK+D PA ER ++E ++ L +D + SAK G
Sbjct: 123 AIDAGHEIIPVLNKIDLPAAEPERIKQQIEDVI-----GLDTSD------AVGISAKTGL 171
Query: 226 ASSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVS 285
N+ Q+L+A++ +PPP +DAP Q L+ D YLG ++ RV
Sbjct: 172 --------------NIDQVLEALVLRLPPPTGDVDAPTQALLVDSWYDSYLGVVILVRVR 217
Query: 286 SGVVSVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGD----IISVAGM 341
GV+ G K+ L + I+ KV K M+ DS AG+ + + +
Sbjct: 218 HGVLRKGMKM--LMMATGAVHPID--KVGVFTPK----MLETDSLSAGEMGFVMAGIKSV 269
Query: 342 TKPSIGHTVANTE--VTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMS 399
IG T+ + ALP + P + P+ D L RL +
Sbjct: 270 ADCQIGDTITDDRAPAAEALPGFKASIPVVWCGL----FPVDSSDFEVLRESLAKLRL-N 324
Query: 400 EAETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKTE--NGV 456
++ + + G L + I+ E + RE G +L + P V+Y+ +G
Sbjct: 325 DSSFEFQAESSAALGFGFRCGFLGLLHMEIIQERLEREFGLDLITTAPSVVYRMHMTDGT 384
Query: 457 KLE 459
LE
Sbjct: 385 LLE 387
>sp|A6TCI3|LEPA_KLEP7 Elongation factor 4 OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=lepA PE=3 SV=1
Length = 599
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 199/416 (47%), Gaps = 58/416 (13%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DR+++ CG E + +DS+ LERERGITI ++ + +
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDY 63
Query: 117 REN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
+ + +LN +DTPGH DF EV R + EGA+LVVDAG+G AQT A++
Sbjct: 64 KASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMD 123
Query: 172 LRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L + +LNK+D PA ER DE+E +V + A D + SAK G
Sbjct: 124 LEVVPVLNKIDLPAADPERVADEIEDIV-----GIDAHD------AVRCSAKTGVG---- 168
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
++ +L+ ++R +PPP+ DAP Q L+ D YLG + R+ +G +
Sbjct: 169 ----------VTDVLERLVRDIPPPEGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGTMR 218
Query: 291 VGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDII-SVAGMTKPSIGHT 349
GDK+ + T ++ + K + G ++ ++ + +G T
Sbjct: 219 KGDKIKVM-----STGQVYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDILGAPVGDT 273
Query: 350 V--ANTEVTTALPTI-ELDPPTISMTFGV-NDSPLAGRDGTHLTGGKIG---ARLMSEAE 402
+ A ALP ++ P + F V +D A RD GK+ A L E E
Sbjct: 274 LTAARNPADKALPGFKKVKPQVYAGLFPVSSDDYEAFRDAL----GKLSLNDASLFYEPE 329
Query: 403 TNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKTENGVK 457
++ A+ + G L + I+ E + RE +L + P V+Y+ E K
Sbjct: 330 SSTALGF------GFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSK 379
>sp|A7MH13|LEPA_CROS8 Elongation factor 4 OS=Cronobacter sakazakii (strain ATCC BAA-894)
GN=lepA PE=3 SV=1
Length = 599
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 136/245 (55%), Gaps = 34/245 (13%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DR+++ CG E + +DS+ LERERGITI ++ + +
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDY 63
Query: 117 REN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
+ + +LN +DTPGH DF EV R + EGA+LVVDAG+G AQT A++
Sbjct: 64 KASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMD 123
Query: 172 LRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L + +LNK+D PA ER +E+E +V + ATD + SAK G
Sbjct: 124 LEVVPVLNKIDLPAADPERVAEEIEDIV-----GIDATD------AVRCSAKTGVG---- 168
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
+ +L+ ++R +PPP+ DAP Q L+ D YLG + RV +G +
Sbjct: 169 ----------VQDVLERLVRDIPPPEGDPDAPLQALIIDSWFDNYLGVVSLIRVKNGTLR 218
Query: 291 VGDKV 295
GDKV
Sbjct: 219 KGDKV 223
>sp|Q21IH3|LEPA_SACD2 Elongation factor 4 OS=Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024) GN=lepA PE=3 SV=1
Length = 599
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 199/424 (46%), Gaps = 72/424 (16%)
Query: 56 DPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVT 112
D +RN ++IAH+DHGK+TL DR ++ CG E + +DS+ +ERERGITI ++
Sbjct: 3 DLSHIRNFSIIAHIDHGKSTLADRFIQHCGGLSAREMEAQVLDSMDIERERGITIKAQSV 62
Query: 113 GISW-----RENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKA 167
+S+ + +LN +DTPGH DF EV R + EGA+LVVDA +G AQ+ A
Sbjct: 63 TLSYTSKSGKVYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQSVANCYTA 122
Query: 168 LKYGLRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWA 226
L GL I +LNK+D P ER E+E ++ + ATD + SAK G
Sbjct: 123 LDQGLEVIPVLNKIDLPQAEPERVASEIEDII-----GIDATD------AVRCSAKSGLG 171
Query: 227 SSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSS 286
+ +L+ +I+ VP P +DAP Q L+ D YLG + RV+
Sbjct: 172 --------------IEDVLEVLIKSVPAPVGDIDAPLQALIIDSWFDNYLGVVSLVRVTQ 217
Query: 287 GVVSVGDKV--------HGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISV 338
G + DK+ H + + T K +E T ++K G V+ AG +I+
Sbjct: 218 GCLKTKDKIILKSLGKPHVVDMVGVFTPKRKE---TGILKAGEVGFVV---AGIKEILGA 271
Query: 339 AGMTKPSIGHTV--ANTEVTTALPTI-ELDPPTISMTFGV-NDSPLAGRDGTHLTGGKI- 393
+G T+ A+T LP ++ P + F V +D RD GK+
Sbjct: 272 ------PVGDTITHASTSTVPQLPGFKKVKPQVYAGLFPVSSDDYENFRDAL----GKLT 321
Query: 394 --GARLMSEAETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMY 450
A L E E++ A+ + G L + I+ E + RE +L + P V+Y
Sbjct: 322 LNDASLFYEPESSEALGF------GFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVIY 375
Query: 451 KTEN 454
+ E
Sbjct: 376 EVEK 379
>sp|A1AWP9|LEPA_RUTMC Elongation factor 4 OS=Ruthia magnifica subsp. Calyptogena
magnifica GN=lepA PE=3 SV=1
Length = 595
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 197/411 (47%), Gaps = 60/411 (14%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+T+ DR ++ CG E + +DS+ +E+ERGITI S+ + +
Sbjct: 4 IRNFSIIAHIDHGKSTIADRFIQFCGGLSDREMSAQVLDSMDIEKERGITIKSQSVTLDY 63
Query: 117 --RENE---LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
R NE LN +DTPGH DF EV R + EGA+L+VDA +G AQT AL G
Sbjct: 64 QARNNETYQLNFIDTPGHVDFSYEVSRSLSACEGALLIVDASQGVEAQTIANCYTALDQG 123
Query: 172 LRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L + +LNK+D PA +R DE+E ++ + A D +YASAK G
Sbjct: 124 LEVVPVLNKIDLPAADPDRVVDEIEDVI-----GVEAHD------AVYASAKSGMG---- 168
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
+ +L+ I+ +P PK ++D+P + L+ D YLG + RV G +
Sbjct: 169 ----------IEDILEQIVEKIPAPKGNIDSPIKALIIDSWFDNYLGVVSLIRVIDGEIR 218
Query: 291 VGDKVHGLRITDSGTEK-IEEGKVTKLMKKKGTGMVLIDSAGAGD----IISVAGMTKPS 345
K+ +I +G E ++E V + +KK +S AG+ I S+ +
Sbjct: 219 TKTKI---KIFSNGKEHLVDEVGVFRPKRKK------TNSLKAGEVGFLIASIKNIDGAP 269
Query: 346 IGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNL 405
+G T+ + + + P P + G+ P++G D RL +
Sbjct: 270 VGDTITGAKNSASKPLEGFKPVQPRVFSGI--FPISGEDYEKFRDALAKLRL-----NDA 322
Query: 406 AINVIPGMAET----YEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYK 451
A+ P ++ + + G L + I+ E + RE L + P V+Y+
Sbjct: 323 ALQYEPENSDALGFGFRIGFLGLLHMEIVQERLEREYNLNLITTAPTVIYE 373
>sp|Q47WP3|LEPA_COLP3 Elongation factor 4 OS=Colwellia psychrerythraea (strain 34H / ATCC
BAA-681) GN=lepA PE=3 SV=1
Length = 596
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 134/245 (54%), Gaps = 34/245 (13%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DRL++ CG E + +DS+ +ERERGITI ++ + +
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRLIQHCGGLQAREMEAQVLDSMDIERERGITIKAQSVTLDY 63
Query: 117 REN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
+ +LN +DTPGH DF EV R + EGA+LVVDAG+G AQT AL+
Sbjct: 64 KAKDGEIYQLNFIDTPGHVDFSYEVSRSLASCEGALLVVDAGQGVEAQTVANCYTALEMD 123
Query: 172 LRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L + +LNK+D P ER C+E+E ++ + ATD + SAK G
Sbjct: 124 LEVLPILNKIDLPQADPERVCEEIEHII-----GIDATD------AVTCSAKTGIG---- 168
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
+ +L+ I++++P P +DAP Q L+ D Y G + RV +G V
Sbjct: 169 ----------IEDVLETIVKNIPSPAGQIDAPLQALIVDSWFDNYQGVVSLVRVINGEVK 218
Query: 291 VGDKV 295
GDK+
Sbjct: 219 KGDKM 223
>sp|Q8DM20|LEPA_THEEB Elongation factor 4 OS=Thermosynechococcus elongatus (strain BP-1)
GN=lepA PE=3 SV=1
Length = 603
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/411 (32%), Positives = 202/411 (49%), Gaps = 58/411 (14%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DRLL+ G P E + +D++ LERERGITI + +++
Sbjct: 9 IRNFSIIAHIDHGKSTLADRLLQLTGTVDPREMKEQFLDNMELERERGITIKLQAARMTY 68
Query: 117 --RENE---LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
R+ E LN++DTPGH DF EV R + EGA+LVVDA +G AQT + AL++
Sbjct: 69 TSRDGETYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEHN 128
Query: 172 LRPILLLNKVDRPAVSEERCD-EVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L I +LNK+D P +R E+E ++ G Q + ASAKEG
Sbjct: 129 LEIIPVLNKIDLPGAEPDRVKAEIEEII-------GLDCSQ----AVLASAKEGIG---- 173
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
+ ++L++I+ VPPP+ ++D P + L+ D Y G I+ RV G+V
Sbjct: 174 ----------IEEILESIVHLVPPPRDTVDQPLRALIFDSYYDAYRGVIVYFRVMDGIVR 223
Query: 291 VGDKVHGLRITDSGTE-KIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTK----PS 345
GD++ R+ SG E +I+E V +K ++S AG++ +A K
Sbjct: 224 RGDRI---RLMASGKEYEIDELGVLAPNQKP------VESLHAGEVGYLAAAIKAVGDAR 274
Query: 346 IGHTV--ANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIG-ARLMSEAE 402
+G T+ A+ LP P + D+ L K+ A L E E
Sbjct: 275 VGDTITLAHNPAKEPLPGYTEAKPMVFCGLFPTDADQFEDLREALEKLKLNDASLHYEPE 334
Query: 403 TNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKT 452
T+ A M + G L + I+ E + RE +L ++ P V+Y+
Sbjct: 335 TSSA------MGFGFRCGFLGLLHMEIIQERLEREYNLDLIITAPSVVYRV 379
>sp|Q39US7|LEPA_GEOMG Elongation factor 4 OS=Geobacter metallireducens (strain GS-15 /
ATCC 53774 / DSM 7210) GN=lepA PE=3 SV=2
Length = 599
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 208/434 (47%), Gaps = 70/434 (16%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA---MDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DRLL GA ER +D + LERERGITI ++ +++
Sbjct: 6 IRNFSIIAHIDHGKSTLADRLLEYTGALSERERQDQFLDKMDLERERGITIKAQTVRLNY 65
Query: 117 RENE-----LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
R ++ LN++DTPGH DF EV R + EG +LVVDA +G AQT + A+
Sbjct: 66 RADDGKDYVLNLIDTPGHVDFTYEVSRSLAACEGGLLVVDASQGVEAQTLANVYLAIDNN 125
Query: 172 LRPILLLNKVDRPAVSEERCD-EVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L +LNK+D PA ER E+E ++ L A D L ASAKEG +
Sbjct: 126 LEVFPVLNKIDLPAAEPERVKHEIEEII-----GLDAHDAVL------ASAKEGIGT--- 171
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
++L+ I++ +PPP+ AP + L+ D Y G I+ R+ G++
Sbjct: 172 -----------REILEEIVKKIPPPEGDPAAPLKALLFDSWYDQYQGVIILARLIDGILK 220
Query: 291 VGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDI-ISVAGM---TKPSI 346
GDK+ L T E ++ G +M++ + AG++ +AG+ I
Sbjct: 221 KGDKIQ-LVSTGRSYEALKVGVFAPVMRE-------VPQLSAGEVGFVIAGIKDVADAKI 272
Query: 347 GHTVANT--EVTTALPTI-ELDPPTISMTFGVNDSPLAG-RDGTHLTGGKIGARLMS-EA 401
G TV +T TT L E+ P S + ++ S RD L K+ S E
Sbjct: 273 GDTVTHTLKPCTTPLGGFKEVKPMVFSGLYPIDTSQYEQLRDA--LAKLKLNDSSFSYEP 330
Query: 402 ETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKT-------- 452
ET+LA+ + G L + I+ E + RE +L + P V+Y+
Sbjct: 331 ETSLALGF------GFRCGFLGLLHMEIIQERLEREFNLDLITTAPTVVYRVHRIKGDMI 384
Query: 453 --ENGVKLEPIEEV 464
E+ +L P +E+
Sbjct: 385 SIESANQLPPTQEI 398
>sp|Q5ZUD2|LEPA_LEGPH Elongation factor 4 OS=Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=lepA
PE=3 SV=1
Length = 610
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 138/258 (53%), Gaps = 37/258 (14%)
Query: 56 DPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVT 112
D R+RN ++IAH+DHGK+TL DR ++ CG E + +DS+ +ERERGITI ++
Sbjct: 12 DLNRIRNFSIIAHIDHGKSTLADRFIQICGGLTEREMSSQVLDSMDIERERGITIKAQCV 71
Query: 113 GISWRENE-----LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKA 167
+++ + LN +DTPGH DF EV R + EGAILVVDA +G AQT V A
Sbjct: 72 SLNYTAKDGKTYLLNFIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGVEAQTLAVCYTA 131
Query: 168 LKYGLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGWA 226
+ L + +LNK+D P ER E+E ++ L A D + SAK G
Sbjct: 132 IDQSLTVLPVLNKIDLPQAEPERVISEIEDII-----GLDAQD------AIRVSAKSGLG 180
Query: 227 SSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSS 286
++ +L+A++ ++PPPK + AP Q L+ D YLG + R+ +
Sbjct: 181 --------------VNDVLEALVANIPPPKGDVHAPLQALIIDSWFDSYLGVVSLVRIVN 226
Query: 287 GVVSVGDKVHGLRITDSG 304
G + GDK +R+ +G
Sbjct: 227 GAIRKGDK---MRVMSTG 241
>sp|A5ID24|LEPA_LEGPC Elongation factor 4 OS=Legionella pneumophila (strain Corby)
GN=lepA PE=3 SV=1
Length = 610
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 138/258 (53%), Gaps = 37/258 (14%)
Query: 56 DPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVT 112
D R+RN ++IAH+DHGK+TL DR ++ CG E + +DS+ +ERERGITI ++
Sbjct: 12 DLNRIRNFSIIAHIDHGKSTLADRFIQICGGLTEREMSSQVLDSMDIERERGITIKAQCV 71
Query: 113 GISWRENE-----LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKA 167
+++ + LN +DTPGH DF EV R + EGAILVVDA +G AQT V A
Sbjct: 72 SLNYTAKDGKTYLLNFIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGVEAQTLAVCYTA 131
Query: 168 LKYGLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGWA 226
+ L + +LNK+D P ER E+E ++ L A D + SAK G
Sbjct: 132 IDQSLTVLPVLNKIDLPQAEPERVISEIEDII-----GLDAQD------AIRVSAKSGLG 180
Query: 227 SSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSS 286
++ +L+A++ ++PPPK + AP Q L+ D YLG + R+ +
Sbjct: 181 --------------VNDVLEALVANIPPPKGDVHAPLQALIIDSWFDSYLGVVSLVRIVN 226
Query: 287 GVVSVGDKVHGLRITDSG 304
G + GDK +R+ +G
Sbjct: 227 GAIRKGDK---MRVMSTG 241
>sp|Q5X443|LEPA_LEGPA Elongation factor 4 OS=Legionella pneumophila (strain Paris)
GN=lepA PE=3 SV=1
Length = 610
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 138/258 (53%), Gaps = 37/258 (14%)
Query: 56 DPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVT 112
D R+RN ++IAH+DHGK+TL DR ++ CG E + +DS+ +ERERGITI ++
Sbjct: 12 DLNRIRNFSIIAHIDHGKSTLADRFIQICGGLTEREMSSQVLDSMDIERERGITIKAQCV 71
Query: 113 GISWRENE-----LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKA 167
+++ + LN +DTPGH DF EV R + EGAILVVDA +G AQT V A
Sbjct: 72 SLNYTAKDGKTYLLNFIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGVEAQTLAVCYTA 131
Query: 168 LKYGLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGWA 226
+ L + +LNK+D P ER E+E ++ L A D + SAK G
Sbjct: 132 IDQSLTVLPVLNKIDLPQAEPERVISEIEDII-----GLDAQD------AIRVSAKSGLG 180
Query: 227 SSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSS 286
++ +L+A++ ++PPPK + AP Q L+ D YLG + R+ +
Sbjct: 181 --------------VNDVLEALVANIPPPKGDVHAPLQALIIDSWFDSYLGVVSLVRIVN 226
Query: 287 GVVSVGDKVHGLRITDSG 304
G + GDK +R+ +G
Sbjct: 227 GAIRKGDK---MRVMSTG 241
>sp|Q3J8D2|LEPA_NITOC Elongation factor 4 OS=Nitrosococcus oceani (strain ATCC 19707 /
NCIMB 11848) GN=lepA PE=3 SV=1
Length = 606
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 194/407 (47%), Gaps = 50/407 (12%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA---MDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+T+ DR ++ CG E A +DS+ LERERGITI ++ +++
Sbjct: 12 IRNFSIIAHIDHGKSTIADRFIQICGGLSKREMAQQVLDSMDLERERGITIKAQSVSLNY 71
Query: 117 --RENE---LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
R E LN +DTPGH DF EV R + EGA+LVVDA +G AQ+ A++ G
Sbjct: 72 CGRNGEVYHLNFIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQSVANCYTAIEQG 131
Query: 172 LRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L + +LNK+D P+ ER C E+E ++ L A+D L SAK G
Sbjct: 132 LEVVPVLNKIDLPSAEPERVCQEIEEII-----GLDASD------ALQVSAKTG------ 174
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
+ + +LL A++ VPPP+ +P + L+ D YLG I RV G +
Sbjct: 175 --------QGIEELLAALVARVPPPQGDPASPLRALIIDSWFDNYLGVISLVRVVDGCLK 226
Query: 291 VGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIIS-VAGMTKPSIGHT 349
DK+ +I +G E K++ +L + G G II+ + + +G T
Sbjct: 227 PKDKI---KIMSTGQHYRVEKAGLFTPKRREVEQLL--TGGVGYIIAGIKDVDGAPVGDT 281
Query: 350 VANTE--VTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIG-ARLMSEAETNLA 406
V + E T ALP + P + DS L ++ A L E ET+ A
Sbjct: 282 VTHVEQFATKALPGFKAVKPQVFAGLFPVDSDDYEDLREALAKLRLNDAALFYEPETSQA 341
Query: 407 INVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKT 452
+ + G L + I+ E + RE L + P V+Y+
Sbjct: 342 LGF------GFRCGFLGMLHMEIIQERLEREYSLNLITTAPTVVYQV 382
>sp|Q5WVI1|LEPA_LEGPL Elongation factor 4 OS=Legionella pneumophila (strain Lens) GN=lepA
PE=3 SV=1
Length = 610
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 138/258 (53%), Gaps = 37/258 (14%)
Query: 56 DPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVT 112
D R+RN ++IAH+DHGK+TL DR ++ CG E + +DS+ +ERERGITI ++
Sbjct: 12 DLNRIRNFSIIAHIDHGKSTLADRFIQICGGLTEREMSSQVLDSMDIERERGITIKAQCV 71
Query: 113 GISWRENE-----LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKA 167
+++ + LN +DTPGH DF EV R + EGAILVVDA +G AQT V A
Sbjct: 72 SLNYTATDGKTYLLNFIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGVEAQTLAVCYTA 131
Query: 168 LKYGLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGWA 226
+ L + +LNK+D P ER E+E ++ L A D + SAK G
Sbjct: 132 IDQSLTVLPVLNKIDLPQAEPERVISEIEDII-----GLDAQD------AIRVSAKSGLG 180
Query: 227 SSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSS 286
++ +L+A++ ++PPPK + AP Q L+ D YLG + R+ +
Sbjct: 181 --------------VNDVLEALVANIPPPKGDVHAPLQALIIDSWFDSYLGVVSLVRIVN 226
Query: 287 GVVSVGDKVHGLRITDSG 304
G + GDK +R+ +G
Sbjct: 227 GSIRKGDK---MRVMSTG 241
>sp|A4WDE0|LEPA_ENT38 Elongation factor 4 OS=Enterobacter sp. (strain 638) GN=lepA PE=3
SV=1
Length = 599
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 136/245 (55%), Gaps = 34/245 (13%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DR+++ CG E + +DS+ LERERGITI ++ + +
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDY 63
Query: 117 RE-----NELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
+ +LN +DTPGH DF EV R + EGA+LVVDAG+G AQT A++
Sbjct: 64 KAADGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEME 123
Query: 172 LRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L + +LNK+D PA ER +E+E +V + ATD + SAK G
Sbjct: 124 LEVVPVLNKIDLPAADPERVAEEIEDIV-----GIDATD------AVRCSAKTGVG---- 168
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
+ +L+ ++R +PPP+ +DAP Q L+ D YLG + R+ +G +
Sbjct: 169 ----------VPDVLERLVRDIPPPEGDVDAPLQALIIDSWFDNYLGVVSLVRIKNGTMR 218
Query: 291 VGDKV 295
GDK+
Sbjct: 219 KGDKI 223
>sp|A1U2V8|LEPA_MARAV Elongation factor 4 OS=Marinobacter aquaeolei (strain ATCC 700491 /
DSM 11845 / VT8) GN=lepA PE=3 SV=1
Length = 600
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 196/411 (47%), Gaps = 55/411 (13%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA---MDSISLERERGITIASKVTGIS 115
R+RN ++IAH+DHGK+TL DR ++ CG E A +DS+ LERERGITI ++ ++
Sbjct: 6 RIRNFSIIAHIDHGKSTLADRFIQICGGLTDREMAEQVLDSMDLERERGITIKAQSVTLN 65
Query: 116 WRENE-----LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 170
++ + LN +DTPGH DF EV R + EGA+LVVDAG+G AQ+ A++
Sbjct: 66 YKAKDGETYKLNFIDTPGHVDFSYEVSRSLYACEGALLVVDAGQGVEAQSVANCYTAIEQ 125
Query: 171 GLRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASST 229
GL + +LNK+D P ER E+E ++ + A+D + SAK G
Sbjct: 126 GLEVVPVLNKMDLPQAEPERVAAEIEDII-----GIDASD------AVRCSAKSGLG--- 171
Query: 230 FTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVV 289
+ +L+ +I+ +PPPK AP Q L+ D YLG + RV+ GV+
Sbjct: 172 -----------VEDVLEDLIKKIPPPKGDRSAPLQALIIDSWFDNYLGVVSLVRVTEGVL 220
Query: 290 SVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIIS-VAGMTKPSIGH 348
GDK I T+K + K T ++++ G +++ + + +G
Sbjct: 221 RKGDK-----IVIKSTKKAWNADKVGVFNPKPTDTDVLEAGDVGFVVAGIKDIHGAPVGD 275
Query: 349 TVANTEVTTALPTI----ELDPPTISMTFGVN-DSPLAGRDGTH-LTGGKIGARLMSEAE 402
T+ + + P + ++ P + F V+ D RD LT A L E E
Sbjct: 276 TIVHQKFAEETPMLPGFKKVKPQVYAGLFPVSADDYDDFRDALEKLTLND--ASLFFEPE 333
Query: 403 TNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKT 452
+ A+ + G L + I+ E + RE +L + P V+Y+
Sbjct: 334 NSDALGF------GFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVIYEV 378
>sp|Q1QX26|LEPA_CHRSD Elongation factor 4 OS=Chromohalobacter salexigens (strain DSM 3043
/ ATCC BAA-138 / NCIMB 13768) GN=lepA PE=3 SV=1
Length = 606
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 200/418 (47%), Gaps = 59/418 (14%)
Query: 52 NSTLDPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIA 108
N+TL +RN ++IAH+DHGK+TL DR+++ CG E + +DS+ LERERGITI
Sbjct: 7 NATL--PHIRNFSIIAHIDHGKSTLSDRIIQICGGLTERELKEQVLDSMDLERERGITIK 64
Query: 109 SKVTGISWREN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFV 163
++ + ++ +LN +DTPGH DF EV R + EGA+LVVDAG+G AQ+
Sbjct: 65 AQSVTLDYKAEDGQVYQLNFIDTPGHVDFSYEVSRSLYACEGALLVVDAGQGVEAQSVAN 124
Query: 164 LAKALKYGLRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAK 222
A++ GL + +LNK+D P +R EVE ++ + A+D SAK
Sbjct: 125 CYTAVEQGLEVLPVLNKMDLPQADPDRVAHEVEEII-----GIDASD------ACRVSAK 173
Query: 223 EGWASSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTG 282
G M LL+ ++R VPPPK +AP Q L+ D YLG I
Sbjct: 174 SGLG--------------MEALLERLVRDVPPPKGDPEAPLQALIVDSWFDNYLGVISLV 219
Query: 283 RVSSGVVSVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMT 342
R+ G + GDK+ ++ T+ E E G T K+K TG++ G VAG+
Sbjct: 220 RLFDGTIKKGDKIR-MKSTERAWEVGEVGIFTP--KRKETGILRAGEVG----FVVAGIK 272
Query: 343 K---PSIGHTVANT---EVTTALPTIE-LDPPTISMTFGV-NDSPLAGRDGTHLTGGKIG 394
+G T+ + E LP + + P + F V +D RD
Sbjct: 273 DIHGAPVGDTIVHAKGGEDVARLPGFQKVKPQVYAGMFPVSSDDYEDFRDALEKLALN-D 331
Query: 395 ARLMSEAETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYK 451
A L E E + A+ + V G L + I+ E + RE +L + P V+Y+
Sbjct: 332 ASLDYEPENSDALGF------GFRVGFLGTLHMEIVQERLEREYNLDLLTTAPTVIYE 383
>sp|P60789|LEPA_GEOSL Elongation factor 4 OS=Geobacter sulfurreducens (strain ATCC 51573
/ DSM 12127 / PCA) GN=lepA PE=3 SV=1
Length = 600
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/434 (30%), Positives = 204/434 (47%), Gaps = 70/434 (16%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DRLL GA E + +D + LERERGITI ++ +++
Sbjct: 6 IRNFSIIAHIDHGKSTLADRLLEYTGALTEREMQDQFLDKMDLERERGITIKAQTVRLTY 65
Query: 117 RENE-----LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
R ++ LN++DTPGH DF EV R + EGA+LVVDA +G AQT + A+
Sbjct: 66 RADDGNDYILNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAIDNN 125
Query: 172 LRPILLLNKVDRPAVSEERCD-EVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L +LNK+D PA ER E+E ++ L A D + ASAKEG +
Sbjct: 126 LEVFPVLNKIDLPAAEPERVKHEIEEII-----GLDAHD------AVMASAKEGIGT--- 171
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
++L+ I++ +PPP+ AP + L+ D Y G I+ RV G V
Sbjct: 172 -----------REILEEIVKKIPPPEGDPAAPLKALLFDSWYDQYQGVIILVRVIDGTVK 220
Query: 291 VGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGD----IISVAGMTKPSI 346
GDK+ L T E ++ G +M++ + AG+ I + + I
Sbjct: 221 KGDKIQ-LVSTGRSYEALKVGVFAPVMRE-------VPQLAAGEVGFLIAGIKDVADAKI 272
Query: 347 GHTVANTEVTTALPT---IELDPPTISMTFGVNDSPLAG-RDGTHLTGGKIGARLMS-EA 401
G TV + P E+ P S + ++ + RD L K+ S E
Sbjct: 273 GDTVTHALKPCVTPLGGFKEVKPMVFSGLYPIDTAQYEQLRDA--LAKLKLNDSSFSFEP 330
Query: 402 ETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKT-------- 452
ET+LA+ + G L + I+ E + RE +L + P V+YK
Sbjct: 331 ETSLALGF------GFRCGFLGLLHMEIIQERLEREFNLDLITTAPTVVYKVHRIKGDVI 384
Query: 453 --ENGVKLEPIEEV 464
E+ +L P++E+
Sbjct: 385 TIESANQLPPLQEI 398
>sp|B0USR9|LEPA_HAES2 Elongation factor 4 OS=Haemophilus somnus (strain 2336) GN=lepA
PE=3 SV=1
Length = 598
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 135/245 (55%), Gaps = 34/245 (13%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DRL++ CG E + +DS+ LERERGITI ++ +++
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRLIQSCGGLSDREMEAQVLDSMDLERERGITIKAQSVTLNY 63
Query: 117 REN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
R +LN +DTPGH DF EV R + EGA+LVVDAG+G AQT A++
Sbjct: 64 RAKDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMD 123
Query: 172 LRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L + +LNK+D PA ER +E+E +V + A D + SAK G
Sbjct: 124 LEVVPILNKIDLPAAEPERVAEEIEDIV-----GIDAID------AVRCSAKTGVG---- 168
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
+ +L+ I+R +P P+ +AP Q L+ D YLG + RV +G++
Sbjct: 169 ----------IEDVLEEIVRKIPAPEGDPNAPLQALIIDSWFDNYLGVVSLVRVKNGILR 218
Query: 291 VGDKV 295
GDK+
Sbjct: 219 KGDKI 223
>sp|Q0I4Z1|LEPA_HAES1 Elongation factor 4 OS=Haemophilus somnus (strain 129Pt) GN=lepA
PE=3 SV=1
Length = 598
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 135/245 (55%), Gaps = 34/245 (13%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DRL++ CG E + +DS+ LERERGITI ++ +++
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRLIQSCGGLSDREMEAQVLDSMDLERERGITIKAQSVTLNY 63
Query: 117 REN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
R +LN +DTPGH DF EV R + EGA+LVVDAG+G AQT A++
Sbjct: 64 RAKDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMD 123
Query: 172 LRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L + +LNK+D PA ER +E+E +V + A D + SAK G
Sbjct: 124 LEVVPILNKIDLPAAEPERVAEEIEDIV-----GIDAID------AVRCSAKTGVG---- 168
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
+ +L+ I+R +P P+ +AP Q L+ D YLG + RV +G++
Sbjct: 169 ----------IEDVLEEIVRKIPAPEGDPNAPLQALIIDSWFDNYLGVVSLVRVKNGILR 218
Query: 291 VGDKV 295
GDK+
Sbjct: 219 KGDKI 223
>sp|Q3MG20|LEPA_ANAVT Elongation factor 4 OS=Anabaena variabilis (strain ATCC 29413 / PCC
7937) GN=lepA PE=3 SV=1
Length = 603
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 195/412 (47%), Gaps = 58/412 (14%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGA---DIPHERAMDSISLERERGITIASKVTGIS 115
R+RN +IAH+DHGK+TL DRLL+ G E+ +D++ LERERGITI + ++
Sbjct: 8 RIRNFCIIAHIDHGKSTLADRLLQATGTVDERQMKEQFLDNMDLERERGITIKLQAARMN 67
Query: 116 WRENE-----LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 170
++ + LN++DTPGH DF EV R + EGA+LVVDA +G AQT + AL++
Sbjct: 68 YQAKDGQQYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEH 127
Query: 171 GLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFP-VLYASAKEGWASS 228
L I +LNK+D P +R E+E ++ LD + ASAKEG
Sbjct: 128 NLEIIPVLNKIDLPGAEPDRVIGEIEEII------------GLDCSGAILASAKEGIG-- 173
Query: 229 TFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGV 288
+S++L+A++ +PPP ++D + L+ D Y G I+ RV G
Sbjct: 174 ------------ISEILEAVVERIPPPPNTVDQRLRALIFDSYYDIYRGVIVYFRVMDGT 221
Query: 289 VSVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDI----ISVAGMTKP 344
V GD+V+ L ++ E E G ++ K +D AG++ ++ +
Sbjct: 222 VKKGDRVY-LMASEKEYEIDELGVLSPTQKP-------VDELHAGEVGYFGAAIKAVADA 273
Query: 345 SIGHTV--ANTEVTTALP-TIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEA 401
+G T+ N + ALP E +P F ++ A L E
Sbjct: 274 RVGDTITLCNAKAAEALPGYTEANPMVFCGMFPIDADQFEDLREALEKLRLNDAALQYEP 333
Query: 402 ETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKT 452
ET+ A M + G L + I+ E + RE +L ++ P V+YK
Sbjct: 334 ETSSA------MGFGFRCGFLGLLHMEIVQERLEREYDLDLIITAPSVVYKV 379
>sp|A0LI00|LEPA_SYNFM Elongation factor 4 OS=Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB) GN=lepA PE=3 SV=1
Length = 598
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 207/412 (50%), Gaps = 62/412 (15%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGIS 115
++RN ++IAH+DHGK+TL DRL+++ G + + +D++ +ERERGITI S+ +
Sbjct: 3 KIRNFSIIAHIDHGKSTLADRLIQRAGLVTDRQFRDQILDNMDIERERGITIKSQTVTLP 62
Query: 116 WR-----ENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 170
+R E ELN++DTPGH DF EV R + EG +L+VDA +G AQT L A+++
Sbjct: 63 YRSRNGEEVELNLIDTPGHVDFSYEVSRALASCEGVLLLVDASQGVQAQTLANLYAAMEH 122
Query: 171 GLRPILLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L I ++NK+D + ++E+ + + LG Q + SAKEG
Sbjct: 123 DLTIIPVINKIDLLSA------DIENTRAQIESELGLDSSQ----AVLCSAKEG------ 166
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
R + +L+A++ +PPP LDAP L+ D + G I+ RV G V
Sbjct: 167 --------RGIDDVLEAVVDRIPPPSGKLDAPLSALIFDAHYDSFRGTIVACRVFDGSVR 218
Query: 291 VGDKVHGLRITDSGTEKIEEGKVTKL----MKKKGTGMVLIDSAGAGDIIS-VAGMTKPS 345
GD + + ++ T K+EE V +L K+ GMV G +IS V ++
Sbjct: 219 PGDVIRFM--SNGATYKVEEVGVFRLSREPKKELRAGMV-------GYVISGVKTVSDTR 269
Query: 346 IGHTVA--NTEVTTALPTI-ELDPPTISMTFGV-NDSPLAGRDGTHLTGGKIG-ARLMSE 400
+G T+ + V LP E+ P S + + +D L+ D L K+ A L+ +
Sbjct: 270 VGDTITLDSNPVPAPLPGFKEVKPVVFSSIYPISSDDYLSLADS--LEKYKLNDAALIYQ 327
Query: 401 AETNLAINVIPGMAETYEVQGRGELQLGILIENMRREGFELSV--SPPKVMY 450
++++A + + + G L L I+ E + RE ++ S+ + P V Y
Sbjct: 328 KDSSVA------LGQGFRCGFLGLLHLEIVQERLERE-YDQSIIMTFPSVQY 372
>sp|Q88MY7|LEPA_PSEPK Elongation factor 4 OS=Pseudomonas putida (strain KT2440) GN=lepA
PE=3 SV=1
Length = 599
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 192/430 (44%), Gaps = 86/430 (20%)
Query: 56 DPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVT 112
D +RN ++IAH+DHGK+TL DR ++ CG E + +DS+ LERERGITI +
Sbjct: 3 DLSHIRNFSIIAHIDHGKSTLADRFIQMCGGLSAREMEAQVLDSMDLERERGITIKAHSV 62
Query: 113 GISWREN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKA 167
+ ++ +LN +DTPGH DF EV R + EGA+LVVDAG+G AQ+ A
Sbjct: 63 TLHYKAQDGKTYQLNFIDTPGHVDFTYEVSRSLAACEGALLVVDAGQGVEAQSVANCYTA 122
Query: 168 LKYGLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGWA 226
++ GL + +LNK+D P +R DE+E ++ + ATD + SAK G
Sbjct: 123 IEQGLEVMPVLNKMDLPQADPDRVKDEIEKII-----GIDATD------AVACSAKSGMG 171
Query: 227 SSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSS 286
+ ++L+ ++ +P P+ +DAP Q L+ D YLG + RV
Sbjct: 172 --------------VDEVLERLVHTIPAPEGEIDAPLQALIIDSWFDNYLGVVSLVRVRQ 217
Query: 287 GVVSVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAG-------------AG 333
G V GDK+ L+K G + L+DS G AG
Sbjct: 218 GRVKKGDKI--------------------LVKSTGK-VHLVDSVGVFTPKHTQTADLKAG 256
Query: 334 DIISVAGMTKPSIGHTVANTEVTTALPTIE-------LDPPTISMTFGVNDSPLAG-RDG 385
++ + K G V +T ++ P +E + P + F V+ RD
Sbjct: 257 EVGFIIASIKDIHGAPVGDTLTLSSTPEVEVLPGFKKIQPQVYAGLFPVSSDDFEDFRDA 316
Query: 386 TH-LTGGKIGARLMSEAETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSV 443
LT + M E+ L G G L + I+ E + RE +L
Sbjct: 317 LQKLTLNDSSLQYMPESSDALGFGFRCGFL--------GMLHMEIIQERLEREYDLDLIT 368
Query: 444 SPPKVMYKTE 453
+ P V+Y+ E
Sbjct: 369 TAPSVIYELE 378
>sp|A3QBS5|LEPA_SHELP Elongation factor 4 OS=Shewanella loihica (strain ATCC BAA-1088 /
PV-4) GN=lepA PE=3 SV=1
Length = 596
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 132/245 (53%), Gaps = 34/245 (13%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA---MDSISLERERGITIASKVTGIS 115
+RN ++IAH+DHGK+TL DRL+++CG E A +DS+ LERERGITI ++ +
Sbjct: 3 HIRNFSIIAHIDHGKSTLSDRLIQECGGLSDREMAAQVLDSMDLERERGITIKAQSVTLD 62
Query: 116 WREN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 170
++ +LN +DTPGH DF EV R + EGA+LVVDAG+G AQT AL
Sbjct: 63 YKAKDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTALDM 122
Query: 171 GLRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASST 229
L + +LNK+D P ER +E+E +V + A D + SAK G
Sbjct: 123 DLDVVPVLNKIDLPQADPERVAEEIEDIV-----GIEAAD------AVRCSAKTGLG--- 168
Query: 230 FTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVV 289
+S +L+ I+ +PPP+ +AP Q L+ D YLG + R+ GV+
Sbjct: 169 -----------ISDVLETIVAQIPPPEGDPEAPLQALIIDSWFDSYLGVVSLVRIKHGVL 217
Query: 290 SVGDK 294
GDK
Sbjct: 218 KKGDK 222
>sp|B5XNG8|LEPA_KLEP3 Elongation factor 4 OS=Klebsiella pneumoniae (strain 342) GN=lepA
PE=3 SV=1
Length = 599
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 135/245 (55%), Gaps = 34/245 (13%)
Query: 60 LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA---MDSISLERERGITIASKVTGISW 116
+RN ++IAH+DHGK+TL DR+++ CG E A +DS+ LERERGITI ++ + +
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMAAQVLDSMDLERERGITIKAQSVTLDY 63
Query: 117 REN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 171
+ + +LN +DTPGH DF EV R + EGA+LVVDAG+G AQT A++
Sbjct: 64 KASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMD 123
Query: 172 LRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L + +LNK+D PA ER DE+E +V + A D + SAK G
Sbjct: 124 LEVVPVLNKIDLPAADPERVADEIEDIV-----GIDAHD------AVRCSAKTGVG---- 168
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
+ +L+ ++R +PPP+ DAP Q L+ D YLG + R+ +G +
Sbjct: 169 ----------VPDVLERLVRDIPPPEGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGTMR 218
Query: 291 VGDKV 295
GDK+
Sbjct: 219 KGDKI 223
>sp|Q8UIQ2|LEPA_AGRT5 Elongation factor 4 OS=Agrobacterium tumefaciens (strain C58 / ATCC
33970) GN=lepA PE=3 SV=1
Length = 608
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 209/423 (49%), Gaps = 59/423 (13%)
Query: 49 VSPNSTLDP-GRLRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSISLERER 103
+S NST P +RN +++AH+DHGK+TL DRL++ G D+ E+ +DS+ +ERER
Sbjct: 1 MSTNSTRTPLDHIRNFSIVAHIDHGKSTLADRLIQSTGGLAERDM-SEQVLDSMDIERER 59
Query: 104 GITIASKVTGISWRENE-----LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLA 158
GITI ++ + ++ N LN++DTPGH DF EV R + EG++LVVDA +G A
Sbjct: 60 GITIKAQTVRLHYKANNGETYVLNLIDTPGHVDFAYEVSRSLSACEGSLLVVDASQGVEA 119
Query: 159 QTKFVLAKALKYGLRPILLLNKVDRPAVSEERCDE-VESLVFDLFANLGATDEQLDFPVL 217
QT + +A+ + +LNK+D PA ER E +E ++ + A+D +
Sbjct: 120 QTLANVYQAIDNNHELVTVLNKIDLPAAEPERIKEQIEEVI-----GIDASD------AV 168
Query: 218 YASAKEGWASSTFTKDPPADVRNMSQLLDAIIRHVPPPKASL--DAPFQMLVTMMEKDFY 275
SAK G + +L+AI+ +PPPK+ + + P + L+ D Y
Sbjct: 169 MISAKTGLG--------------IPDVLEAIVNRLPPPKSDVGENGPLKALLVDSWYDTY 214
Query: 276 LGRILTGRVSSGVVSVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDI 335
LG ++ RV GV++ G ++ R+ SG + E +V L K MV +DS G G+I
Sbjct: 215 LGVMVLVRVIDGVLTKGQQI---RMMGSGAKYGVE-RVGVLTPK----MVNVDSLGPGEI 266
Query: 336 ----ISVAGMTKPSIGHTVANTEVTT--ALPTIELDPPTISMTFGVNDSPLAGRDGTHLT 389
S+ + +G T+ + + T ALP + P + P+ D L
Sbjct: 267 GFITASIKEVADTRVGDTITDDKRPTAQALPGFKPAQPVVFCGL----FPVDAADFEDLR 322
Query: 390 GGKIGARLMSEAETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKV 448
+G +++A + + + + G L L I+ E + RE +L + P V
Sbjct: 323 AA-VGKLRLNDASFSFEMESSAALGFGFRCGFLGLLHLEIIQERLEREFNLDLVATAPSV 381
Query: 449 MYK 451
+Y+
Sbjct: 382 VYE 384
>sp|Q8YU48|LEPA_NOSS1 Elongation factor 4 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=lepA PE=3 SV=1
Length = 603
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 196/412 (47%), Gaps = 58/412 (14%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGA---DIPHERAMDSISLERERGITIASKVTGIS 115
R+RN +IAH+DHGK+TL DRLL+ G E+ +D++ LERERGITI + ++
Sbjct: 8 RIRNFCIIAHIDHGKSTLADRLLQATGTVDERQMKEQFLDNMDLERERGITIKLQAARMN 67
Query: 116 WRENE-----LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 170
++ + LN++DTPGH DF EV R + EGA+LVVDA +G AQT + AL++
Sbjct: 68 YQAKDGQQYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEH 127
Query: 171 GLRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFP-VLYASAKEGWASS 228
L I +LNK+D P +R E+E ++ LD + ASAKEG
Sbjct: 128 NLEIIPVLNKIDLPGAEPDRVVGEIEEII------------GLDCSGAILASAKEGIG-- 173
Query: 229 TFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGV 288
++++L+A++ VPPP ++D + L+ D Y G I+ RV G
Sbjct: 174 ------------INEILEAVVERVPPPPNTVDQRLRALIFDSYYDIYRGVIVYFRVMDGT 221
Query: 289 VSVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDI----ISVAGMTKP 344
V GD+V+ L ++ E E G ++ K ++ AG++ ++ +
Sbjct: 222 VKKGDRVY-LMASEKEYEIDELGVLSPTQKP-------VNELHAGEVGYFGAAIKAVADA 273
Query: 345 SIGHTV--ANTEVTTALP-TIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEA 401
+G T+ N + T ALP E +P F ++ A L E
Sbjct: 274 RVGDTITLCNAKATEALPGYTEANPMVFCGMFPIDADQFEDLREALEKLRLNDAALQYEP 333
Query: 402 ETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPPKVMYKT 452
ET+ A M + G L + I+ E + RE +L ++ P V+YK
Sbjct: 334 ETSSA------MGFGFRCGFLGLLHMEIVQERLEREYDLDLIITAPSVVYKV 379
>sp|A8MFA6|LEPA_ALKOO Elongation factor 4 OS=Alkaliphilus oremlandii (strain OhILAs)
GN=lepA PE=3 SV=1
Length = 602
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 164/312 (52%), Gaps = 42/312 (13%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGIS 115
++RN ++IAH+DHGK+TL DRL+ G E + +D++ LERERGITI + +
Sbjct: 8 KIRNFSIIAHIDHGKSTLADRLIEYTGLISQREMQSQMLDNMDLERERGITIKLQTIRLV 67
Query: 116 WR-----ENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 170
++ E LN++DTPGH DF EV R + EGA+L+VDA +G AQT + AL+
Sbjct: 68 YKAKDGEEYYLNLIDTPGHVDFTYEVSRSLAACEGAVLIVDAAQGIEAQTLANVYLALEQ 127
Query: 171 GLRPILLLNKVDRPAVSEERCDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASSTF 230
L I ++NK+D P+ R DE+++ + D+ L A++ L SAKEG
Sbjct: 128 DLEIIPVINKIDLPSA---RPDEIKTEIEDIIG-LDASEAPL------ISAKEGL----- 172
Query: 231 TKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVVS 290
N+ +L++I+++VP PK ++AP + L+ D Y G I RV G V
Sbjct: 173 ---------NIEDVLESIVKNVPSPKGDINAPLKALIFDSYYDSYKGVIAYMRVMEGQVK 223
Query: 291 VGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSIGHTV 350
G KV + T+ E +E G + G + +DS AGD+ +A K + H
Sbjct: 224 KGMKVK-MMATNKEFEVVEVGAFS-------PGAIPLDSLSAGDVGYLAASIK-DVRHCR 274
Query: 351 ANTEVTTAL-PT 361
+T AL PT
Sbjct: 275 VGDTITDALNPT 286
>sp|C1DQS0|LEPA_AZOVD Elongation factor 4 OS=Azotobacter vinelandii (strain DJ / ATCC
BAA-1303) GN=lepA PE=3 SV=1
Length = 599
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 161/320 (50%), Gaps = 42/320 (13%)
Query: 56 DPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVT 112
D +RN ++IAH+DHGK+TL DR ++ CG E + +DS+ LERERGITI +
Sbjct: 3 DLSHIRNFSIIAHIDHGKSTLADRFIQICGGLSEREMEAQVLDSMDLERERGITIKAHSV 62
Query: 113 GISWREN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKA 167
+ ++ +LN +DTPGH DF EV R + EGA+LVVDAG+G AQ+ A
Sbjct: 63 TLHYKAQDGKTYQLNFIDTPGHVDFTYEVSRSLAACEGALLVVDAGQGVEAQSVANCYTA 122
Query: 168 LKYGLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGWA 226
++ GL + +LNK+D P ER DE+E ++ + A D L SAK G
Sbjct: 123 IEQGLEVMPVLNKMDLPQAEPERVKDEIEHII-----GIDAGDAVL------CSAKSGMG 171
Query: 227 SSTFTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSS 286
+ +L+ ++R +PPP+ ++AP Q L+ D YLG + RV
Sbjct: 172 --------------VPDVLEHLVRVIPPPQGEIEAPLQALIIDSWFDNYLGVVSLVRVKH 217
Query: 287 GVVSVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAGAGDIISVAGMTKPSI 346
G V GDK I T K+ + + K T M + + G II AG+ K
Sbjct: 218 GRVKKGDK-----ILVKSTGKVHQVDSVGVFTPKHTEMPDLKAGEVGFII--AGI-KDIH 269
Query: 347 GHTVANTEVTTALPTIELDP 366
G V +T ++ P +++ P
Sbjct: 270 GAPVGDTLTLSSTPNVDMLP 289
>sp|A1S3X9|LEPA_SHEAM Elongation factor 4 OS=Shewanella amazonensis (strain ATCC BAA-1098
/ SB2B) GN=lepA PE=3 SV=1
Length = 596
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 159/329 (48%), Gaps = 48/329 (14%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA---MDSISLERERGITIASKVTGIS 115
+RN ++IAH+DHGK+TL DRL++ CG E A +DS+ LERERGITI ++ +
Sbjct: 3 HIRNFSIIAHIDHGKSTLSDRLIQVCGGLTDREMAEQVLDSMDLERERGITIKAQSVTLD 62
Query: 116 WREN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 170
+ +LN +DTPGH DF EV R + EGA+LVVDAG+G AQT AL+
Sbjct: 63 YTAKNGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTALEM 122
Query: 171 GLRPILLLNKVDRPAVSEER-CDEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASST 229
L + +LNK+D P ER E+E +V + ATD + SAK G
Sbjct: 123 DLEVVPVLNKIDLPQAEPERVAAEIEDIV-----GIEATD------AVRCSAKTGVG--- 168
Query: 230 FTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVV 289
+ ++L+ I+ +P P+ +AP Q L+ D YLG + R+ +GV+
Sbjct: 169 -----------IGEVLETIVAQIPSPEGDPEAPLQALIIDSWFDSYLGVVSLVRIKNGVL 217
Query: 290 SVGDKVHGLRITDSGTEKIEEGKVTKLMKKKG-----------TGMVLIDSAGAGDIISV 338
GDK + T G T MK + G+ I A GD +++
Sbjct: 218 KKGDKFKVMS-TGQAYNADRVGIFTPKMKDQAELKTGQVGYVIAGIKEIHGAPVGDTLTL 276
Query: 339 A--GMTKPSIGHTVANTEVTTALPTIELD 365
A G KP G A +V + TI D
Sbjct: 277 AKHGADKPLPGFKKAKPQVYAGVFTISTD 305
>sp|A5W8F4|LEPA_PSEP1 Elongation factor 4 OS=Pseudomonas putida (strain F1 / ATCC 700007)
GN=lepA PE=3 SV=1
Length = 596
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 191/427 (44%), Gaps = 86/427 (20%)
Query: 59 RLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSISLERERGITIASKVTGIS 115
+RN ++IAH+DHGK+TL DR ++ CG E + +DS+ LERERGITI + +
Sbjct: 3 HIRNFSIIAHIDHGKSTLADRFIQMCGGLSAREMEAQVLDSMDLERERGITIKAHSVTLH 62
Query: 116 WREN-----ELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 170
++ +LN +DTPGH DF EV R + EGA+LVVDAG+G AQ+ A++
Sbjct: 63 YKAQDGKTYQLNFIDTPGHVDFTYEVSRSLAACEGALLVVDAGQGVEAQSVANCYTAIEQ 122
Query: 171 GLRPILLLNKVDRPAVSEERC-DEVESLVFDLFANLGATDEQLDFPVLYASAKEGWASST 229
GL + +LNK+D P +R DE+E ++ + ATD + SAK G
Sbjct: 123 GLEVMPVLNKMDLPQADPDRVKDEIEKII-----GIDATD------AVACSAKSGMG--- 168
Query: 230 FTKDPPADVRNMSQLLDAIIRHVPPPKASLDAPFQMLVTMMEKDFYLGRILTGRVSSGVV 289
+ ++L+ ++ +P P+ +DAP Q L+ D YLG + RV G V
Sbjct: 169 -----------VDEVLERLVHTIPAPEGEIDAPLQALIIDSWFDNYLGVVSLVRVRQGRV 217
Query: 290 SVGDKVHGLRITDSGTEKIEEGKVTKLMKKKGTGMVLIDSAG-------------AGDII 336
GDK+ L+K G + L+DS G AG++
Sbjct: 218 KKGDKI--------------------LVKSTGK-VHLVDSVGVFTPKHTQTADLKAGEVG 256
Query: 337 SVAGMTKPSIGHTVANTEVTTALPTIE-------LDPPTISMTFGVNDSPLAG-RDGTH- 387
+ K G V +T ++ P +E + P + F V+ RD
Sbjct: 257 FIIASIKDIHGAPVGDTLTLSSTPEVEVLPGFKKIQPQVYAGLFPVSSDDFEDFRDALQK 316
Query: 388 LTGGKIGARLMSEAETNLAINVIPGMAETYEVQGRGELQLGILIENMRRE-GFELSVSPP 446
LT + M E+ L G G L + I+ E + RE +L + P
Sbjct: 317 LTLNDSSLQYMPESSDALGFGFRCGFL--------GMLHMEIIQERLEREYDLDLITTAP 368
Query: 447 KVMYKTE 453
V+Y+ E
Sbjct: 369 SVIYELE 375
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 237,990,168
Number of Sequences: 539616
Number of extensions: 10268501
Number of successful extensions: 44931
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 4007
Number of HSP's successfully gapped in prelim test: 458
Number of HSP's that attempted gapping in prelim test: 29860
Number of HSP's gapped (non-prelim): 6168
length of query: 639
length of database: 191,569,459
effective HSP length: 124
effective length of query: 515
effective length of database: 124,657,075
effective search space: 64198393625
effective search space used: 64198393625
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)