Query 006616
Match_columns 638
No_of_seqs 768 out of 5129
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 04:21:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006616.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006616hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jue_A Arfgap with coiled-coil 100.0 1.5E-55 5.2E-60 469.6 22.1 286 302-637 29-324 (368)
2 1dcq_A PYK2-associated protein 100.0 1.1E-53 3.7E-58 439.5 19.9 256 305-638 4-262 (278)
3 3lvq_E ARF-GAP with SH3 domain 100.0 2.2E-53 7.5E-58 472.7 17.6 252 305-638 10-264 (497)
4 2b0o_E UPLC1; arfgap, structur 100.0 7.9E-53 2.7E-57 438.0 19.7 252 305-638 29-283 (301)
5 2iqj_A Stromal membrane-associ 100.0 2.5E-38 8.7E-43 281.8 7.3 119 303-448 12-130 (134)
6 2crr_A Stromal membrane-associ 100.0 5.5E-38 1.9E-42 282.2 6.7 117 304-447 15-131 (141)
7 2olm_A Nucleoporin-like protei 100.0 9.5E-37 3.2E-41 273.8 8.1 120 304-448 11-130 (140)
8 2owa_A Arfgap-like finger doma 100.0 4.7E-33 1.6E-37 248.1 8.2 110 306-443 24-133 (138)
9 2crw_A ARF GAP 3, ADP-ribosyla 100.0 7E-32 2.4E-36 243.0 5.9 89 305-394 16-104 (149)
10 3lju_X ARF-GAP with dual PH do 100.0 1.2E-31 4E-36 286.0 8.3 120 304-448 20-139 (386)
11 3dwd_A ADP-ribosylation factor 100.0 1.5E-31 5.1E-36 237.9 5.7 85 305-391 25-109 (147)
12 2p57_A GTPase-activating prote 100.0 1.9E-30 6.4E-35 231.2 6.3 86 305-391 24-109 (144)
13 3sub_A ADP-ribosylation factor 100.0 3.3E-30 1.1E-34 232.3 6.3 86 306-393 9-95 (163)
14 4gpm_A Engineered protein OR26 100.0 5.6E-29 1.9E-33 236.0 11.8 158 455-638 3-160 (169)
15 2q13_A DCC-interacting protein 99.9 2.1E-26 7.2E-31 246.9 16.2 172 1-239 204-380 (385)
16 4h8s_A DCC-interacting protein 99.9 1.3E-26 4.3E-31 250.5 13.7 172 1-239 227-403 (407)
17 3o47_A ADP-ribosylation factor 99.9 2.2E-25 7.5E-30 233.9 6.4 87 304-392 23-109 (329)
18 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.5E-24 1.5E-28 199.2 12.1 157 455-638 4-161 (162)
19 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.4E-23 8.4E-28 196.3 11.9 155 457-637 15-169 (169)
20 4b93_B Ankyrin repeat domain-c 99.9 2.7E-23 9.4E-28 211.9 12.3 166 458-623 54-229 (269)
21 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1E-22 3.4E-27 188.9 12.3 152 458-636 4-155 (156)
22 3twr_A Tankyrase-2; ankyrin re 99.9 2.8E-23 9.7E-28 194.7 8.5 156 457-638 9-164 (165)
23 3v30_A DNA-binding protein rfx 99.9 6.8E-23 2.3E-27 193.4 9.7 154 458-637 4-158 (172)
24 3v31_A Ankyrin repeat family A 99.9 7.8E-23 2.7E-27 192.1 10.0 154 458-637 5-158 (167)
25 3f6q_A Integrin-linked protein 99.9 3.7E-23 1.3E-27 196.8 7.9 157 457-638 6-162 (179)
26 2etb_A Transient receptor pote 99.9 3.5E-23 1.2E-27 208.4 7.6 179 458-638 4-245 (256)
27 1awc_B Protein (GA binding pro 99.9 1.4E-22 5E-27 187.6 10.6 150 457-633 3-152 (153)
28 2rfm_A Putative ankyrin repeat 99.9 1.1E-22 3.7E-27 195.7 10.1 154 458-637 37-190 (192)
29 2rfa_A Transient receptor pote 99.9 1.9E-22 6.3E-27 199.7 11.7 179 458-638 5-221 (232)
30 3hra_A Ankyrin repeat family p 99.9 5.1E-22 1.8E-26 191.9 13.4 177 459-637 8-201 (201)
31 2f8y_A Notch homolog 1, transl 99.9 7E-22 2.4E-26 194.2 14.5 179 457-638 26-215 (223)
32 4gpm_A Engineered protein OR26 99.9 4.7E-22 1.6E-26 188.2 12.3 118 519-638 10-127 (169)
33 1d9s_A Cyclin-dependent kinase 99.9 1.2E-22 4E-27 184.5 7.7 120 516-638 15-135 (136)
34 1s70_B 130 kDa myosin-binding 99.9 4.9E-22 1.7E-26 204.3 13.0 156 457-638 41-256 (299)
35 1oy3_D Transcription factor in 99.9 6.7E-22 2.3E-26 201.0 13.0 178 458-638 47-249 (282)
36 1yyh_A HN1;, notch 1, ankyrin 99.9 1.1E-21 3.7E-26 197.5 13.5 176 458-636 59-245 (253)
37 3jxi_A Vanilloid receptor-rela 99.9 2.1E-22 7.1E-27 203.1 7.9 179 458-638 7-249 (260)
38 2rlo_A Centaurin-gamma 1; spli 99.9 2.3E-21 7.8E-26 174.8 12.0 116 97-238 2-128 (128)
39 3ljn_A Hypothetical protein; a 99.9 9E-22 3.1E-26 208.8 10.9 179 457-638 54-268 (364)
40 4hbd_A KN motif and ankyrin re 99.9 1.1E-21 3.8E-26 200.6 10.5 157 458-638 113-274 (276)
41 3aji_A 26S proteasome non-ATPa 99.9 3.1E-21 1.1E-25 190.6 13.3 179 457-638 41-229 (231)
42 1yyh_A HN1;, notch 1, ankyrin 99.8 2.4E-21 8.3E-26 194.9 12.1 179 458-638 12-214 (253)
43 1ikn_D Protein (I-kappa-B-alph 99.8 6.6E-22 2.2E-26 196.6 7.8 155 458-638 47-208 (236)
44 3b7b_A Euchromatic histone-lys 99.8 6.7E-21 2.3E-25 189.0 14.5 166 458-624 46-222 (237)
45 4b93_B Ankyrin repeat domain-c 99.8 2.6E-21 8.7E-26 197.2 11.7 176 458-638 13-209 (269)
46 2pnn_A Transient receptor pote 99.8 9.5E-22 3.2E-26 200.0 8.4 123 514-638 102-257 (273)
47 3t8k_A Uncharacterized protein 99.8 4.9E-22 1.7E-26 191.1 5.2 153 458-636 8-176 (186)
48 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1E-20 3.6E-25 159.8 12.7 92 545-638 1-92 (93)
49 2jab_A H10-2-G3; HER2, darpin, 99.8 4.7E-21 1.6E-25 173.9 11.1 120 516-637 17-136 (136)
50 1ycs_B 53BP2, P53BP2; ankyrin 99.8 7.6E-22 2.6E-26 197.2 6.1 154 458-638 7-163 (239)
51 2dzn_A Probable 26S proteasome 99.8 9.4E-21 3.2E-25 186.6 13.5 121 516-638 75-199 (228)
52 1k1a_A B-cell lymphoma 3-encod 99.8 8.3E-21 2.8E-25 188.4 13.0 178 458-638 48-240 (241)
53 3ljn_A Hypothetical protein; a 99.8 1.7E-21 5.7E-26 206.7 7.9 179 457-638 21-235 (364)
54 1ikn_D Protein (I-kappa-B-alph 99.8 8.6E-21 2.9E-25 188.5 12.5 155 458-638 10-175 (236)
55 3aji_A 26S proteasome non-ATPa 99.8 2E-21 6.8E-26 192.0 7.8 146 458-604 75-230 (231)
56 3utm_A Tankyrase-1; tankyrase, 99.8 1.2E-20 4.2E-25 197.5 14.0 179 457-638 59-304 (351)
57 2fo1_E LIN-12 protein; beta-ba 99.8 8.2E-21 2.8E-25 202.6 12.7 179 457-638 167-370 (373)
58 2xai_A ASB-9, ankyrin repeat a 99.8 5.9E-21 2E-25 193.1 10.9 176 458-638 5-190 (261)
59 2f8y_A Notch homolog 1, transl 99.8 1.9E-20 6.6E-25 183.8 14.3 169 468-638 2-182 (223)
60 4g8k_A 2-5A-dependent ribonucl 99.8 5.6E-21 1.9E-25 200.4 10.5 153 458-638 170-325 (337)
61 1wdy_A 2-5A-dependent ribonucl 99.8 2.1E-20 7.3E-25 189.6 13.4 178 458-638 74-277 (285)
62 2xai_A ASB-9, ankyrin repeat a 99.8 1.2E-20 4.1E-25 190.9 10.7 176 457-638 37-221 (261)
63 1wi1_A Calcium-dependent activ 99.8 3.6E-20 1.2E-24 162.7 11.8 96 99-234 8-110 (126)
64 3d9h_A CDNA FLJ77766, highly s 99.8 2.2E-20 7.4E-25 191.8 12.2 176 458-638 61-246 (285)
65 1n11_A Ankyrin; clathrin, BAND 99.8 4.1E-20 1.4E-24 200.9 15.0 178 458-638 181-368 (437)
66 1oy3_D Transcription factor in 99.8 9.5E-21 3.3E-25 192.5 8.9 155 458-638 11-216 (282)
67 2da0_A 130-kDa phosphatidylino 99.8 8.8E-20 3E-24 160.8 13.5 102 94-239 5-106 (114)
68 2vge_A RELA-associated inhibit 99.8 3.6E-21 1.2E-25 191.3 4.5 143 474-638 2-147 (229)
69 1n0r_A 4ANK, 4 ankyrin repeats 99.8 4.5E-20 1.5E-24 163.7 10.9 118 519-638 8-125 (126)
70 1bi7_B P16INK4A, MTS1, multipl 99.8 1.3E-20 4.4E-25 175.2 7.5 120 516-638 15-135 (156)
71 3d9h_A CDNA FLJ77766, highly s 99.8 4.9E-20 1.7E-24 189.1 11.7 174 457-636 93-275 (285)
72 4g8k_A 2-5A-dependent ribonucl 99.8 6.1E-20 2.1E-24 192.5 12.2 120 517-638 172-297 (337)
73 3v31_A Ankyrin repeat family A 99.8 7.9E-20 2.7E-24 171.4 11.7 123 514-638 4-126 (167)
74 1k1a_A B-cell lymphoma 3-encod 99.8 9.2E-20 3.2E-24 180.9 12.4 179 458-638 11-207 (241)
75 3b7b_A Euchromatic histone-lys 99.8 8.8E-20 3E-24 180.8 11.9 178 458-638 13-201 (237)
76 3kea_A K1L; tropism, ANK repea 99.8 2.9E-20 9.8E-25 190.9 8.2 177 458-638 33-219 (285)
77 2rfm_A Putative ankyrin repeat 99.8 8.7E-20 3E-24 175.4 10.9 120 517-638 39-158 (192)
78 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.2E-19 3.9E-24 171.0 11.4 121 516-638 17-137 (169)
79 3c5r_A BARD-1, BRCA1-associate 99.8 8.4E-21 2.9E-25 172.2 3.2 119 517-637 14-132 (137)
80 2rsg_A Collagen type IV alpha- 99.8 1.5E-19 5E-24 153.6 10.6 92 99-232 1-92 (94)
81 2fo1_E LIN-12 protein; beta-ba 99.8 7.2E-20 2.5E-24 195.3 10.7 180 457-638 126-337 (373)
82 3kea_A K1L; tropism, ANK repea 99.8 4.5E-20 1.5E-24 189.4 8.5 172 462-638 5-185 (285)
83 1sw6_A Regulatory protein SWI6 99.8 2.4E-20 8.1E-25 195.5 5.8 150 464-638 104-307 (327)
84 3eu9_A Huntingtin-interacting 99.8 1.9E-19 6.5E-24 177.9 11.5 178 458-638 44-234 (240)
85 1wdy_A 2-5A-dependent ribonucl 99.8 2.7E-19 9.2E-24 181.4 12.8 154 458-636 7-170 (285)
86 3v30_A DNA-binding protein rfx 99.8 2.8E-19 9.5E-24 168.5 11.8 119 518-638 7-126 (172)
87 3utm_A Tankyrase-1; tankyrase, 99.8 2.8E-19 9.6E-24 187.2 13.1 108 524-637 225-332 (351)
88 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.3E-19 4.5E-24 168.7 9.4 119 517-638 9-127 (162)
89 3c5r_A BARD-1, BRCA1-associate 99.8 5E-19 1.7E-23 160.5 12.9 100 536-638 1-100 (137)
90 3f6q_A Integrin-linked protein 99.8 3.7E-19 1.3E-23 169.1 12.5 109 528-638 21-129 (179)
91 1awc_B Protein (GA binding pro 99.8 2.1E-19 7.2E-24 166.2 10.4 114 522-638 11-124 (153)
92 1n11_A Ankyrin; clathrin, BAND 99.8 3.7E-19 1.3E-23 193.2 13.7 178 458-638 148-335 (437)
93 1bi7_B P16INK4A, MTS1, multipl 99.8 1.4E-19 4.8E-24 168.1 8.6 138 457-619 13-151 (156)
94 3eu9_A Huntingtin-interacting 99.8 4.4E-19 1.5E-23 175.3 12.0 178 458-638 11-201 (240)
95 1v88_A Oxysterol binding prote 99.8 1E-18 3.4E-23 157.4 12.9 95 97-234 6-124 (130)
96 2d9x_A Oxysterol binding prote 99.8 6.3E-19 2.2E-23 156.8 11.3 103 96-239 5-109 (120)
97 3twr_A Tankyrase-2; ankyrin re 99.8 8.1E-19 2.8E-23 164.1 12.6 111 526-638 21-132 (165)
98 2dzn_A Probable 26S proteasome 99.8 1.6E-19 5.6E-24 177.6 7.4 150 458-636 74-227 (228)
99 2dhk_A TBC1 domain family memb 99.8 2.5E-18 8.4E-23 152.8 14.2 102 97-239 6-109 (119)
100 1x1f_A Signal-transducing adap 99.8 1.8E-18 6E-23 159.1 13.5 96 98-234 17-113 (149)
101 4hbd_A KN motif and ankyrin re 99.8 1.6E-19 5.5E-24 184.5 7.2 154 459-638 79-241 (276)
102 1sw6_A Regulatory protein SWI6 99.8 1.7E-19 5.9E-24 188.9 6.7 162 472-636 34-227 (327)
103 3aaa_C Myotrophin, protein V-1 99.8 2.1E-19 7.2E-24 159.9 6.2 113 516-633 10-122 (123)
104 1d9s_A Cyclin-dependent kinase 99.8 6.1E-19 2.1E-23 159.9 9.4 100 536-638 2-102 (136)
105 1pls_A Pleckstrin homology dom 99.8 5.5E-18 1.9E-22 148.8 14.8 99 98-237 4-104 (113)
106 1v5p_A Pleckstrin homology dom 99.8 1.7E-18 5.7E-23 155.1 11.3 99 100-233 16-119 (126)
107 1ycs_B 53BP2, P53BP2; ankyrin 99.8 8.7E-19 3E-23 174.9 10.2 119 517-638 9-127 (239)
108 1wgq_A FYVE, rhogef and PH dom 99.8 4.6E-18 1.6E-22 148.4 13.5 95 98-233 7-102 (109)
109 2d9v_A Pleckstrin homology dom 99.8 5E-18 1.7E-22 153.3 13.8 107 95-234 4-114 (130)
110 2l6b_A NR1C; ankyrin, consensu 99.8 1.1E-18 3.6E-23 153.3 9.0 96 541-638 4-99 (115)
111 2dn6_A KIAA0640 protein; PH do 99.8 6.3E-18 2.1E-22 148.8 13.8 102 97-239 6-108 (115)
112 2p0d_A RHO GTPase-activating p 99.8 5.3E-18 1.8E-22 152.8 13.6 111 97-236 10-126 (129)
113 3ehr_A Osteoclast-stimulating 99.8 2.5E-19 8.6E-24 176.4 5.0 125 510-638 72-197 (222)
114 1wjm_A Beta-spectrin III; PH d 99.8 2.6E-18 9E-23 153.5 11.2 105 97-235 6-118 (123)
115 3deo_A Signal recognition part 99.8 1.4E-18 4.8E-23 165.9 9.9 119 517-636 48-181 (183)
116 1fao_A Dual adaptor of phospho 99.8 5.1E-18 1.7E-22 152.1 12.8 98 96-235 15-113 (126)
117 2coc_A FYVE, rhogef and PH dom 99.8 4.5E-18 1.6E-22 148.6 12.1 93 100-233 9-105 (112)
118 2rfa_A Transient receptor pote 99.8 3E-18 1E-22 169.3 12.2 142 495-638 15-182 (232)
119 1upq_A PEPP1; PH domain, phosp 99.8 9.9E-18 3.4E-22 149.4 14.3 98 97-234 9-109 (123)
120 2i5f_A Pleckstrin; PH domain, 99.8 9.8E-18 3.4E-22 146.1 13.7 97 97-233 5-108 (109)
121 1s70_B 130 kDa myosin-binding 99.7 6.1E-19 2.1E-23 181.1 6.8 172 457-634 74-284 (299)
122 1u5d_A SKAP55, SRC kinase-asso 99.7 6.3E-18 2.2E-22 146.8 12.2 99 98-236 2-107 (108)
123 3cxb_B Pleckstrin homology dom 99.7 8.3E-18 2.8E-22 147.6 12.9 95 101-235 2-102 (112)
124 3ui2_A Signal recognition part 99.7 3E-18 1E-22 171.8 11.0 117 517-636 49-182 (244)
125 2cof_A Protein KIAA1914; PH do 99.7 2E-18 7E-23 150.2 8.5 94 97-233 6-100 (107)
126 2etb_A Transient receptor pote 99.7 2.3E-18 8E-23 173.0 9.9 129 510-638 42-205 (256)
127 3rcp_A Pleckstrin homology dom 99.7 4.2E-18 1.4E-22 147.0 10.1 93 101-235 1-94 (103)
128 3aaa_C Myotrophin, protein V-1 99.7 6.7E-18 2.3E-22 150.0 11.5 94 543-638 4-97 (123)
129 1unq_A RAC-alpha serine/threon 99.7 5.3E-18 1.8E-22 151.8 10.8 102 97-238 6-114 (125)
130 2yry_A Pleckstrin homology dom 99.7 2.1E-17 7.2E-22 147.1 14.6 98 96-233 19-119 (122)
131 3aj4_A Pleckstrin homology dom 99.7 9.6E-18 3.3E-22 147.1 12.1 103 97-233 3-110 (112)
132 1v89_A Hypothetical protein KI 99.7 1.7E-17 5.9E-22 146.5 13.8 98 96-234 5-112 (118)
133 2dkp_A Pleckstrin homology dom 99.7 1.3E-17 4.5E-22 149.8 13.1 99 96-234 18-119 (128)
134 1bd8_A P19INK4D CDK4/6 inhibit 99.7 3.5E-18 1.2E-22 158.1 9.5 107 527-636 16-123 (156)
135 1fgy_A GRP1; PH domain, signal 99.7 1.4E-17 4.9E-22 149.2 13.2 96 98-235 4-121 (127)
136 1x05_A Pleckstrin; PH domain, 99.7 1.3E-17 4.6E-22 150.0 13.0 100 96-235 15-121 (129)
137 2lul_A Tyrosine-protein kinase 99.7 1.6E-17 5.3E-22 156.1 13.7 100 97-235 13-122 (164)
138 1v5u_A SBF1, SET binding facto 99.7 1.1E-17 3.9E-22 147.6 12.1 97 97-233 6-110 (117)
139 2cod_A Centaurin-delta 1; ARF 99.7 2.8E-17 9.5E-22 144.9 14.4 95 96-235 5-100 (115)
140 4a6h_A Phosphatidylinositol 4, 99.7 1.4E-17 4.9E-22 147.4 11.6 97 99-233 6-117 (120)
141 2d9y_A Pleckstrin homology dom 99.7 2.6E-17 8.8E-22 145.3 13.1 97 97-233 9-108 (117)
142 2w2x_D 1-phosphatidylinositol- 99.7 1.1E-17 3.9E-22 149.5 10.7 102 97-235 10-120 (124)
143 3jxi_A Vanilloid receptor-rela 99.7 4.1E-18 1.4E-22 171.5 8.6 128 511-638 46-209 (260)
144 2zgd_A 3 repeat synthetic anky 99.7 1.5E-17 5.2E-22 145.1 10.7 93 539-633 17-109 (110)
145 1wg7_A Dedicator of cytokinesi 99.7 1.9E-17 6.6E-22 153.1 11.3 104 96-238 15-128 (150)
146 1u5f_A SRC-associated adaptor 99.7 2.8E-17 9.7E-22 151.7 12.4 101 97-237 15-122 (148)
147 1x1g_A Pleckstrin 2; PH domain 99.7 2.5E-17 8.6E-22 148.2 11.6 99 97-234 16-124 (129)
148 1btn_A Beta-spectrin; signal t 99.7 2.3E-17 7.8E-22 143.0 10.6 98 101-232 1-106 (106)
149 1eaz_A Tandem PH domain contai 99.7 2.3E-17 7.7E-22 147.5 10.8 100 96-236 11-113 (125)
150 2jab_A H10-2-G3; HER2, darpin, 99.7 2.3E-17 7.8E-22 149.4 10.9 94 543-638 11-104 (136)
151 1btk_A Bruton'S tyrosine kinas 99.7 2.3E-17 8E-22 155.5 11.3 101 98-234 2-132 (169)
152 3hra_A Ankyrin repeat family p 99.7 3.4E-17 1.1E-21 157.9 11.9 145 494-638 16-169 (201)
153 2pnn_A Transient receptor pote 99.7 6.8E-18 2.3E-22 171.4 7.3 165 457-638 14-217 (273)
154 1u5e_A SRC-associated adaptor 99.7 5.9E-17 2E-21 158.3 13.1 99 97-235 104-209 (211)
155 1dyn_A Dynamin; signal transdu 99.7 6.9E-17 2.4E-21 140.0 11.9 93 99-231 12-114 (125)
156 2y7b_A Actin-binding protein a 99.7 2.9E-17 9.8E-22 148.8 9.9 101 98-236 4-130 (134)
157 1n0r_A 4ANK, 4 ankyrin repeats 99.7 1.3E-16 4.3E-21 141.2 12.7 92 545-638 1-92 (126)
158 2vge_A RELA-associated inhibit 99.7 1.1E-16 3.9E-21 158.8 13.6 106 531-638 3-111 (229)
159 3deo_A Signal recognition part 99.7 2E-17 7E-22 157.8 7.7 93 543-638 41-134 (183)
160 2j59_M RHO-GTPase activating p 99.7 8.6E-17 3E-21 151.7 11.2 98 99-234 3-111 (168)
161 3ehr_A Osteoclast-stimulating 99.7 9E-17 3.1E-21 158.0 9.8 95 542-638 69-164 (222)
162 3t8k_A Uncharacterized protein 99.7 2.3E-17 8E-22 158.4 4.5 100 539-638 30-145 (186)
163 1dro_A Beta-spectrin; cytoskel 99.7 1.5E-16 5.1E-21 141.8 9.1 104 98-234 7-119 (122)
164 3ui2_A Signal recognition part 99.7 6.7E-17 2.3E-21 161.9 7.5 92 544-638 43-135 (244)
165 3a8p_A T-lymphoma invasion and 99.6 6.9E-16 2.4E-20 155.6 13.3 108 97-238 9-128 (263)
166 3pp2_A RHO GTPase-activating p 99.6 1.5E-15 5.2E-20 135.6 12.3 110 97-234 6-123 (124)
167 1n0q_A 3ANK, 3 ankyrin repeats 99.6 5.8E-16 2E-20 130.4 7.3 87 518-604 7-93 (93)
168 3tfm_A Myosin X; split PH doma 99.6 1.4E-15 4.9E-20 150.6 10.7 97 96-234 55-155 (228)
169 1qqg_A IRS-1, insulin receptor 99.6 1.4E-15 5E-20 153.2 10.3 101 96-236 7-114 (264)
170 2l6b_A NR1C; ankyrin, consensu 99.6 3.3E-16 1.1E-20 137.2 4.3 100 517-616 13-112 (115)
171 2r09_A Cytohesin-3; autoinhibi 99.6 3.8E-15 1.3E-19 156.6 12.8 95 98-234 212-328 (347)
172 3lju_X ARF-GAP with dual PH do 99.6 5E-15 1.7E-19 157.7 13.1 98 97-235 267-373 (386)
173 2dtc_A RAL guanine nucleotide 99.6 1.8E-14 6.1E-19 127.4 13.7 103 100-234 2-112 (126)
174 2aja_A Ankyrin repeat family p 99.6 8.1E-17 2.8E-21 171.6 -3.6 115 520-637 99-222 (376)
175 2b0o_E UPLC1; arfgap, structur 99.5 1E-15 3.4E-20 158.4 3.1 95 524-624 204-298 (301)
176 2aja_A Ankyrin repeat family p 99.5 3.6E-17 1.2E-21 174.3 -9.9 147 458-638 94-249 (376)
177 3jue_A Arfgap with coiled-coil 99.5 2.2E-14 7.6E-19 152.2 10.3 96 541-638 194-292 (368)
178 3tca_A Amyloid beta A4 precurs 99.5 2.8E-14 9.6E-19 146.6 10.6 101 94-233 163-275 (291)
179 2fjl_A 1-phosphatidylinositol- 99.5 3.5E-13 1.2E-17 121.3 14.2 127 100-234 2-148 (150)
180 3lvq_E ARF-GAP with SH3 domain 99.5 3.1E-14 1.1E-18 157.6 6.8 97 513-609 173-270 (497)
181 2ys3_A UNC-112-related protein 99.4 3.8E-13 1.3E-17 118.7 9.9 98 97-232 7-110 (137)
182 1dcq_A PYK2-associated protein 99.4 4.3E-13 1.5E-17 136.9 11.8 91 546-638 130-229 (278)
183 2rov_A RHO-associated protein 99.4 9.7E-13 3.3E-17 115.7 9.5 97 101-234 3-115 (117)
184 2d9w_A Docking protein 2; PH d 99.4 4.8E-12 1.6E-16 109.3 12.7 101 97-233 10-120 (127)
185 2zgd_A 3 repeat synthetic anky 99.4 5.5E-13 1.9E-17 115.9 6.2 81 518-598 29-109 (110)
186 3a8n_A TIAM-1, T-lymphoma inva 99.3 1.8E-12 6.1E-17 130.2 8.9 107 97-237 9-127 (279)
187 4ejn_A RAC-alpha serine/threon 99.2 1E-11 3.5E-16 135.3 8.8 101 98-236 5-110 (446)
188 4gmv_A RAS-associated and plec 99.2 3.5E-11 1.2E-15 120.9 10.6 99 97-233 156-265 (281)
189 3hk0_A Growth factor receptor- 99.2 3.3E-11 1.1E-15 119.8 10.2 101 95-233 128-239 (256)
190 1w1g_A HPDK1, 3-phosphoinositi 99.1 3.4E-10 1.2E-14 101.7 10.1 94 97-239 50-144 (151)
191 4bbk_A Kindlin-1, fermitin fam 99.0 1E-09 3.5E-14 97.9 10.2 99 96-232 23-127 (165)
192 4f7h_A Fermitin family homolog 99.0 1.2E-09 3.9E-14 98.7 10.4 98 97-232 45-148 (173)
193 3mpx_A FYVE, rhogef and PH dom 99.0 5.3E-09 1.8E-13 113.5 15.2 99 98-238 243-341 (434)
194 2coa_A Protein kinase C, D2 ty 98.9 5.3E-09 1.8E-13 90.3 8.9 101 96-233 5-118 (125)
195 2d9z_A Protein kinase C, NU ty 98.8 2.6E-08 8.8E-13 86.2 11.6 103 96-234 5-123 (129)
196 1zc3_B Exocyst complex protein 98.6 6.2E-07 2.1E-11 77.9 13.0 104 99-238 8-111 (113)
197 2vrw_B P95VAV, VAV1, proto-onc 98.4 1.4E-05 4.8E-10 85.6 20.5 99 99-237 234-338 (406)
198 3ky9_A Proto-oncogene VAV; cal 98.3 3.5E-05 1.2E-09 86.5 20.4 99 99-237 406-510 (587)
199 1v61_A RAC/CDC42 guanine nucle 98.1 1.4E-05 4.8E-10 70.9 9.3 56 179-234 70-126 (132)
200 1v5m_A SH2 and PH domain-conta 98.0 5.9E-05 2E-09 65.4 12.1 104 95-235 14-131 (136)
201 3qwm_A Iqsec1, IQ motif and SE 98.0 4.9E-05 1.7E-09 67.5 11.7 58 180-238 63-126 (140)
202 2q12_A DIP13 alpha, DCC-intera 98.0 4.9E-06 1.7E-10 83.8 5.9 54 1-54 204-258 (265)
203 2dfk_A Collybistin II; DH doma 97.9 0.00022 7.6E-09 76.1 17.9 106 97-239 255-368 (402)
204 2pz1_A RHO guanine nucleotide 97.9 0.00028 9.4E-09 76.9 17.9 105 98-239 333-445 (466)
205 1xcg_A PDZ-rhogef, RHO guanine 97.9 0.00041 1.4E-08 73.0 18.3 112 97-235 251-367 (368)
206 3t06_A PDZ-rhogef, RHO guanine 97.8 0.00048 1.6E-08 73.9 18.3 112 97-235 293-409 (418)
207 2lg1_A A-kinase anchor protein 97.8 0.0002 6.7E-09 67.8 12.0 103 97-237 69-175 (185)
208 3odw_A RHO guanine nucleotide 97.7 0.0013 4.4E-08 72.8 19.3 114 97-237 410-527 (536)
209 3p6a_A RHO guanine nucleotide 97.7 0.001 3.5E-08 70.1 17.8 108 98-235 258-372 (377)
210 3tfm_A Myosin X; split PH doma 97.6 3.2E-05 1.1E-09 76.0 4.8 39 95-135 17-55 (228)
211 1dbh_A Protein (human SOS 1); 97.6 0.00036 1.2E-08 73.0 12.4 104 97-234 245-349 (354)
212 1kz7_A Guanine nucleotide exch 97.4 0.0012 4.2E-08 69.0 14.0 109 98-238 209-329 (353)
213 1txd_A RHO guanine nucleotide 97.4 0.0044 1.5E-07 65.5 17.9 117 97-239 255-374 (385)
214 3ml4_A Protein DOK-7; tyrosine 97.4 0.00034 1.1E-08 66.6 7.7 96 99-232 9-111 (224)
215 1mai_A Phospholipase C delta-1 97.3 0.0018 6.1E-08 57.5 10.9 38 199-236 84-123 (131)
216 1nty_A Triple functional domai 97.2 0.0024 8.2E-08 65.5 13.1 103 98-236 202-310 (311)
217 3jzy_A Intersectin 2; C2 domai 97.1 6.3E-05 2.2E-09 82.9 0.0 115 98-239 252-367 (510)
218 2rgn_B RHOA/RAC/CDC42 exchange 97.1 0.0027 9.4E-08 66.3 12.3 106 98-236 206-320 (354)
219 2z0q_A XPLN, RHO guanine nucle 97.1 0.0015 5E-08 68.1 10.1 34 200-233 308-345 (346)
220 1foe_A T-lymphoma invasion and 96.9 0.06 2.1E-06 56.5 20.5 60 180-239 303-371 (377)
221 3ksy_A SOS-1, SON of sevenless 96.7 0.0073 2.5E-07 72.1 12.6 103 97-234 442-546 (1049)
222 3v5w_A G-protein coupled recep 95.9 0.033 1.1E-06 62.8 11.4 97 97-236 557-654 (689)
223 1fho_A UNC-89; pleckstrin homo 94.9 0.076 2.6E-06 45.9 7.8 100 98-235 9-113 (119)
224 1z87_A Alpha-1-syntrophin; pro 94.0 0.083 2.9E-06 52.4 6.8 36 199-234 225-262 (263)
225 2adz_A Alpha-1-syntrophin; pro 93.9 0.11 3.8E-06 47.8 6.9 52 182-234 122-177 (178)
226 3zvr_A Dynamin-1; hydrolase, D 91.7 4.1 0.00014 46.4 17.3 91 99-229 540-640 (772)
227 1gnf_A Transcription factor GA 75.2 1.6 5.5E-05 30.6 2.3 37 317-353 3-40 (46)
228 2vut_I AREA, nitrogen regulato 70.2 2.1 7.1E-05 29.6 1.8 34 319-352 2-36 (43)
229 2zkm_X 1-phosphatidylinositol- 69.0 16 0.00054 41.9 10.0 37 200-236 96-137 (799)
230 4gat_A Nitrogen regulatory pro 67.4 2.9 9.9E-05 31.8 2.3 36 317-352 8-44 (66)
231 3dfx_A Trans-acting T-cell-spe 65.1 2.3 7.8E-05 32.0 1.3 36 317-352 6-42 (63)
232 3qr0_A Phospholipase C-beta (P 64.2 17 0.00059 41.6 9.0 38 200-237 103-145 (816)
233 3ohm_B 1-phosphatidylinositol- 64.1 11 0.00039 43.5 7.5 38 200-237 100-142 (885)
234 1u5k_A Hypothetical protein; O 62.9 5.8 0.0002 38.4 4.2 50 316-383 148-197 (244)
235 3swy_A Cyclic nucleotide-gated 61.6 24 0.00083 24.6 5.9 40 13-52 5-44 (46)
236 2kae_A GATA-type transcription 52.9 3.4 0.00011 31.9 0.4 35 318-353 8-45 (71)
237 3swf_A CGMP-gated cation chann 52.0 43 0.0015 25.8 6.4 44 13-56 7-50 (74)
238 4hc9_A Trans-acting T-cell-spe 47.9 7.4 0.00025 33.1 1.8 35 318-352 5-40 (115)
239 1tjl_A DNAK suppressor protein 46.6 5.6 0.00019 35.6 0.9 34 316-349 109-143 (151)
240 3g9m_A Glucocorticoid receptor 43.8 9.9 0.00034 30.7 1.9 30 317-349 1-30 (90)
241 3a98_B Engulfment and cell mot 39.6 2E+02 0.007 26.6 10.6 32 201-232 116-148 (203)
242 4hc9_A Trans-acting T-cell-spe 36.8 17 0.00056 30.9 2.2 38 316-353 57-95 (115)
243 1d4u_A Nucleotide excision rep 36.7 10 0.00034 32.0 0.8 32 317-348 4-36 (111)
244 1hcq_A Protein (estrogen recep 36.7 17 0.00058 28.9 2.2 31 317-350 3-33 (84)
245 1r4i_A Androgen receptor; AR, 35.7 14 0.00049 30.7 1.7 32 316-350 5-36 (105)
246 2kgo_A Uncharacterized protein 35.2 4.1 0.00014 34.2 -1.8 33 317-349 55-88 (108)
247 2nll_B Protein (thyroid hormon 34.0 15 0.0005 30.5 1.5 29 319-350 2-30 (103)
248 1dl6_A Transcription factor II 33.1 22 0.00074 26.1 2.1 28 319-347 12-39 (58)
249 3a58_A Exocyst complex compone 33.1 2.1E+02 0.0073 28.2 9.6 38 201-239 186-223 (320)
250 2ebl_A COUP transcription fact 33.0 16 0.00056 29.4 1.5 31 317-350 6-36 (89)
251 2han_B Ecdysone receptor; tran 31.3 20 0.00069 30.5 1.9 31 317-350 7-37 (119)
252 2uzg_A Ubiquitin carboxyl-term 30.8 26 0.00089 28.6 2.4 28 316-343 23-53 (97)
253 2han_A Protein ultraspiracle; 30.7 21 0.00073 28.9 1.9 31 317-350 9-39 (93)
254 3ulb_A Target of rapamycin com 29.3 1E+02 0.0035 26.1 5.8 36 200-235 74-115 (121)
255 4glq_A Methyl-accepting chemot 28.6 38 0.0013 30.4 3.5 41 336-394 119-159 (171)
256 2a66_A Orphan nuclear receptor 28.2 20 0.00069 30.3 1.3 32 316-350 7-38 (113)
257 1ynw_B Retinoic acid receptor 27.0 22 0.00075 29.3 1.3 30 318-350 3-32 (99)
258 1a6y_A Orphan nuclear receptor 26.3 26 0.00088 28.5 1.6 30 318-350 7-36 (94)
259 1cit_A NGFI-B, protein (orphan 25.8 29 0.001 27.9 1.8 28 320-350 2-29 (89)
260 1dsz_B RXR-alpha, retinoic aci 25.7 17 0.00059 29.0 0.5 31 317-350 4-34 (85)
261 1kb2_A Vitamin D3 receptor; VD 25.5 24 0.00082 29.6 1.3 29 319-350 7-35 (110)
262 1dsz_A RAR-alpha, retinoic aci 25.5 24 0.00083 28.1 1.3 29 319-350 5-33 (86)
263 3hie_A Protein PSL1, exocyst c 25.0 1.2E+02 0.004 27.5 5.8 38 200-238 115-152 (171)
264 1lo1_A Steroid hormone recepto 24.9 20 0.00067 29.5 0.6 30 318-350 4-33 (98)
265 2g45_A Ubiquitin carboxyl-term 22.6 42 0.0014 29.0 2.3 28 316-343 32-59 (129)
266 2kq9_A DNAK suppressor protein 22.4 15 0.00052 30.9 -0.5 32 315-346 78-110 (112)
267 3cbb_A HNF-4-alpha, hepatocyte 21.4 34 0.0012 26.7 1.4 28 320-350 2-29 (78)
268 3j21_d 50S ribosomal protein L 21.3 27 0.00093 28.0 0.8 32 313-345 28-76 (89)
269 1t3j_A Mitofusin 1; coiled coi 20.7 2.1E+02 0.0071 23.2 5.9 42 11-52 27-68 (96)
No 1
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=100.00 E-value=1.5e-55 Score=469.61 Aligned_cols=286 Identities=34% Similarity=0.506 Sum_probs=221.1
Q ss_pred ccCCchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhch
Q 006616 302 CVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGN 381 (638)
Q Consensus 302 ~~~~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN 381 (638)
..+.+++++.|++.|+|+.|||||+++|+|+|+|||||+|++||||||+||+||||||||+|| .|+++++++|+.+||
T Consensus 29 ~~~~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~c~~~hr~lg~~~s~v~s~~~d--~w~~~~~~~~~~~gn 106 (368)
T 3jue_A 29 PGGVGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLD--SWEPELVKLMCELGN 106 (368)
T ss_dssp ---CCCHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHHSCH
T ss_pred hhHHHHHHHHHHcCCCcCcCCCCCCCCCCeEEecCCeEEcHhHHHHHhccCCCcCeeEEeecc--cccHHHHHHHHHHcc
Confidence 345788999999999999999999999999999999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHHhhhccccccccCCCCCCCCCCCCccccccCCCCCCCCHHHHHHHHHHHHhhhhhccCCCCccccc-----cc
Q 006616 382 AFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKYAEKLFVRKPKDNQYLH-----SV 456 (638)
Q Consensus 382 ~~~n~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~fv~~~~~~~~~~-----~~ 456 (638)
..+|+|||+.+++. ...||.++++...|++||++||++++|+.+........ ..
T Consensus 107 ~~~n~~~e~~~~~~---------------------~~~kp~~~~~~~~re~fIr~KY~~k~f~~~l~~~~~~~~~~~~~r 165 (368)
T 3jue_A 107 VIINQIYEARVEAM---------------------AVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRGRPR 165 (368)
T ss_dssp HHHHHHHTTTTTTT---------------------TCCCCCTTSCHHHHHHHHHHHHTSCTTCCSCC-------------
T ss_pred HHHHHHHHhhcccc---------------------cCcCCCCCCCHHHHHHHHHHHHHhhcccccchhhhhccccccCcc
Confidence 99999999999862 14689999999999999999999999998865322100 00
Q ss_pred ccceec-ccccccchhhhhhh-cccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccC-Cccccccccc
Q 006616 457 AHQIWE-GVRTNDKKAVYRHI-VNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSD-RSSSGSLNLA 533 (638)
Q Consensus 457 ~~~L~~-Av~~~d~~~v~~lL-l~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~-~~~~~~~lL~ 533 (638)
.+.... .....+.....+.. .....+++..... ..|+.+... +....+..|+
T Consensus 166 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------t~L~~Aa~~~g~~~~v~~LL 220 (368)
T 3jue_A 166 GQPPVPPKPSIRPRPGSLRSKPEPPSEDLGSLHPG-------------------------ALLFRASGHPPSLPTMADAL 220 (368)
T ss_dssp -------------------------------CCHH-------------------------HHHHHHTSSSCCHHHHHHHH
T ss_pred cCCCCCCCcccCCCCccccccccccccccccCCCC-------------------------cHHHHHHHccCCHHHHHHHH
Confidence 000000 00000000000000 0111222221111 122233333 4555666667
Q ss_pred CCCCCCCcCC--CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCC
Q 006616 534 GTSEGQTMDD--LEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNRE 611 (638)
Q Consensus 534 ~~~~~~~~~d--~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~ 611 (638)
..|++++..+ ..|.||||+||..|+.++|++||++|+++|.+|..|+||||+|+..|+.+++++||++|++++.+|.+
T Consensus 221 ~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~ 300 (368)
T 3jue_A 221 AHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSE 300 (368)
T ss_dssp HTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCC
Confidence 7777777777 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHcCCCcHHHHHHHhhCC
Q 006616 612 GKTSLELAVESNFADSEVLAILSDSH 637 (638)
Q Consensus 612 g~TpL~~A~~~g~~d~eiv~lLle~g 637 (638)
|.||||+|+..|+ .+++++|++++
T Consensus 301 G~TpL~~A~~~g~--~~iv~lLl~~~ 324 (368)
T 3jue_A 301 GRDPLTIAMETAN--ADIVTLLRLAK 324 (368)
T ss_dssp SCCHHHHHHHTTC--HHHHHHHHHHH
T ss_pred CCCHHHHHHHCCC--HHHHHHHHHcC
Confidence 9999999999998 89999998764
No 2
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=100.00 E-value=1.1e-53 Score=439.50 Aligned_cols=256 Identities=35% Similarity=0.562 Sum_probs=230.4
Q ss_pred CchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHHH
Q 006616 305 SEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFA 384 (638)
Q Consensus 305 ~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~~ 384 (638)
.+++++.|++.|||+.|||||+++|+|+|+|||+++|++||||||+||+|||+||||+|| .|+++++.+|..+||..+
T Consensus 4 ~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~c~~~hr~lg~~is~v~s~~~d--~~~~~~l~~~~~~GN~~~ 81 (278)
T 1dcq_A 4 TKEIISEVQRMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLD--VLGTSELLLAKNIGNAGF 81 (278)
T ss_dssp HHHHHHHHHHSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCGGGGHHHHHSCHHHH
T ss_pred HHHHHHHHHcCCCCCcCCCCCCCCCCeEEecCCeEEcHHHHHHHhhcCCCcceeeeeecC--CCCHHHHHHHHHcCcHHH
Confidence 457889999999999999999999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHhhhccccccccCCCCCCCCCCCCccccccCCCCCCCCHHHHHHHHHHHHhhhhhccCCCCcccccccccceeccc
Q 006616 385 NSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKYAEKLFVRKPKDNQYLHSVAHQIWEGV 464 (638)
Q Consensus 385 n~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~fv~~~~~~~~~~~~~~~L~~Av 464 (638)
|+|||+.++... ..||.+.+++..++.||+.||..+.|..+..... ......|+.|+
T Consensus 82 n~i~e~~l~~~~---------------------~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~--~~~l~~l~~a~ 138 (278)
T 1dcq_A 82 NEIMECCLPSED---------------------PVKPNPGSDMIARKDYITAKYMERRYARKKHADT--AAKLHSLCEAV 138 (278)
T ss_dssp HHHHTTTCCSSS---------------------CCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSH--HHHHHHHHHHH
T ss_pred HHHHHhhCChhh---------------------cCCCCCCCCHHHHHHHHHHHHHHhhccccccccc--chhhhhhhhHh
Confidence 999999887621 3589999999999999999999999998866544 23457899999
Q ss_pred ccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCCCCCCcCCC
Q 006616 465 RTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTSEGQTMDDL 544 (638)
Q Consensus 465 ~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d~ 544 (638)
..+|...+..+| ..|+|++... .++..|.
T Consensus 139 ~~~d~~~~~~ll-~~g~~~~~~~--------------------------------------------------~l~~~~~ 167 (278)
T 1dcq_A 139 KTRDIFGLLQAY-ADGVDLTEKI--------------------------------------------------PLANGHE 167 (278)
T ss_dssp HTTCHHHHHHHH-HTTCCTTSBC--------------------------------------------------CCSSCSS
T ss_pred hhcccHHHHHHH-Hhhcchhhhc--------------------------------------------------ccccccc
Confidence 999998876655 7788876431 1223356
Q ss_pred CCCcHHHHHHHh---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHH
Q 006616 545 EGCTLLHLACDS---ADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVE 621 (638)
Q Consensus 545 ~G~TpLh~Aa~~---g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~ 621 (638)
.|+||||+|+.. |+.+++++|+++|+++|.+|..|+||||+|+..|+.++|++||++||+++.+|.+|.||||+|+.
T Consensus 168 ~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 247 (278)
T 1dcq_A 168 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKR 247 (278)
T ss_dssp TTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Confidence 799999999999 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHhhCCC
Q 006616 622 SNFADSEVLAILSDSHG 638 (638)
Q Consensus 622 ~g~~d~eiv~lLle~ga 638 (638)
.|+ .+++++|+++||
T Consensus 248 ~~~--~~~v~~Ll~~ga 262 (278)
T 1dcq_A 248 LKH--EHCEELLTQALS 262 (278)
T ss_dssp TTC--HHHHHHHHHHHT
T ss_pred cCC--HHHHHHHHHcCC
Confidence 998 899999999875
No 3
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=100.00 E-value=2.2e-53 Score=472.71 Aligned_cols=252 Identities=33% Similarity=0.539 Sum_probs=227.3
Q ss_pred CchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHHH
Q 006616 305 SEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFA 384 (638)
Q Consensus 305 ~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~~ 384 (638)
++.+++.+++.|||..|||||+++|+|+|+|+|||+|++||||||+||+||||||||+|| .|+++++.+|+.+||..+
T Consensus 10 ~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~~~~~c~~c~~~hr~lg~~~s~vrsl~ld--~w~~~~~~l~~~~GN~~a 87 (497)
T 3lvq_E 10 TKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLD--LLGPSELLLALNMGNTSF 87 (497)
T ss_dssp HHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCGGGGTTTTTCCHHHH
T ss_pred HHHHHHHHhcCCCCCcccCCCCCCCCEEEechhHHhHHhhHHHHHhhccccceecccccC--CCCHHHHHHHHHHhhHHH
Confidence 467889999999999999999999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHhhhccccccccCCCCCCCCCCCCccccccCCCCCCCCHHHHHHHHHHHHhhhhhccCCCCcccccccccceeccc
Q 006616 385 NSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKYAEKLFVRKPKDNQYLHSVAHQIWEGV 464 (638)
Q Consensus 385 n~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~fv~~~~~~~~~~~~~~~L~~Av 464 (638)
|.+||+.++... ..+|.+.++...++.||++||+++.|..+..... +.|+.|+
T Consensus 88 n~i~E~~lp~~~---------------------~~kP~~~s~~~~re~fIraky~~~~f~~~~~~~~------~~L~~A~ 140 (497)
T 3lvq_E 88 NEVMEAQLPSHG---------------------GPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEP------QRLWTAI 140 (497)
T ss_dssp HHHHTTTCCSSS---------------------CSCCCTTCCHHHHHHHHHHHHTTCTTSCCCC-CH------HHHHHHH
T ss_pred HHHHHhhccccc---------------------CCCCCCcCcHHHHHHHHHHHhhcccccccccccH------HHHHHHH
Confidence 999999998621 3688889999999999999999999998765443 6799999
Q ss_pred ccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCCCCCCcCCC
Q 006616 465 RTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTSEGQTMDDL 544 (638)
Q Consensus 465 ~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d~ 544 (638)
..|+...|..+| +.|+|+|...... ..|.
T Consensus 141 ~~g~~~~v~~ll-~~g~~~n~~~~~~--------------------------------------------------~~~~ 169 (497)
T 3lvq_E 141 CNRDLLSVLEAF-ANGQDFGQPLPGP--------------------------------------------------DAQA 169 (497)
T ss_dssp HHTCHHHHHHHH-HTTCCSSSCBCCS--------------------------------------------------SSCC
T ss_pred hccCHHHHHHHH-hhcccccCCCCCc--------------------------------------------------cccc
Confidence 999999887665 8899998653211 1256
Q ss_pred CCCcHHHHHHH---hCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHH
Q 006616 545 EGCTLLHLACD---SADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVE 621 (638)
Q Consensus 545 ~G~TpLh~Aa~---~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~ 621 (638)
.|.||||+||. .|+.++|++||++|+++|.+|..|+||||+|+..|+.++|++||++||+++.+|.+|.||||+|+.
T Consensus 170 ~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 249 (497)
T 3lvq_E 170 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK 249 (497)
T ss_dssp SCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHH
T ss_pred ccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 79999999976 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHhhCCC
Q 006616 622 SNFADSEVLAILSDSHG 638 (638)
Q Consensus 622 ~g~~d~eiv~lLle~ga 638 (638)
.|+ .+++++|+++||
T Consensus 250 ~~~--~~~~~~Ll~~ga 264 (497)
T 3lvq_E 250 KHH--KECEELLEQAQA 264 (497)
T ss_dssp TTC--HHHHHHHHHTCC
T ss_pred cCC--HHHHHHHHHhCC
Confidence 998 899999999986
No 4
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.9e-53 Score=437.99 Aligned_cols=252 Identities=33% Similarity=0.538 Sum_probs=221.5
Q ss_pred CchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHHH
Q 006616 305 SEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFA 384 (638)
Q Consensus 305 ~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~~ 384 (638)
.+.+++.|++.|+|+.|+|||+++|+|+|+|+|||+|++|||+||+||+|||||||++|| .|+++++.+|..+||..+
T Consensus 29 ~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~cs~~hr~lg~~is~v~sl~lD--~w~~~~l~~~~~~GN~~~ 106 (301)
T 2b0o_E 29 TKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLD--LLGPSELLLALNMGNTSF 106 (301)
T ss_dssp HHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHhcCCCCCcCCCCCCCCCCeEEeecCeEEcHHHHHHHHhhCCCcccccccCcC--CCCHHHHHHHHHcCCHHH
Confidence 456788899999999999999999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHhhhccccccccCCCCCCCCCCCCccccccCCCCCCCCHHHHHHHHHHHHhhhhhccCCCCcccccccccceeccc
Q 006616 385 NSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKYAEKLFVRKPKDNQYLHSVAHQIWEGV 464 (638)
Q Consensus 385 n~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~fv~~~~~~~~~~~~~~~L~~Av 464 (638)
|++||+.++... ..||.+.++...|+.||+.||..+.|..+.... .+.|+.|+
T Consensus 107 n~i~E~~l~~~~---------------------~~kP~~~s~~~~r~~~I~~Ky~~~~f~~~~~~~------~~~L~~A~ 159 (301)
T 2b0o_E 107 NEVMEAQLPSHG---------------------GPKPSAESDMGTRRDYIMAKYVEHRFARRCTPE------PQRLWTAI 159 (301)
T ss_dssp HHHHTTTCCSSS---------------------CSCCCTTCCHHHHHHHHHHHHTSCTTSCCCC-C------HHHHHHHH
T ss_pred HHHHHHhhhhcc---------------------CCCCCCcccHHHHHHHHHHHHHhhhhhcccCch------HHHHhhhh
Confidence 999999987621 368888889999999999999999998765432 35799999
Q ss_pred ccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCCCCCCcCCC
Q 006616 465 RTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTSEGQTMDDL 544 (638)
Q Consensus 465 ~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d~ 544 (638)
..++...|..+| ..|+|+|...... ..|.
T Consensus 160 ~~g~~~~v~~ll-~~g~d~~~~~~~~--------------------------------------------------~~~~ 188 (301)
T 2b0o_E 160 CNRDLLSVLEAF-ANGQDFGQPLPGP--------------------------------------------------DAQA 188 (301)
T ss_dssp HTTCHHHHHHHH-HTTCCTTSCEECS--------------------------------------------------SSCS
T ss_pred hccCHHHHHHHH-hcCCcccccCCCc--------------------------------------------------ccCC
Confidence 999999887766 8899987532110 1245
Q ss_pred CCCcHHHHHHHh---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHH
Q 006616 545 EGCTLLHLACDS---ADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVE 621 (638)
Q Consensus 545 ~G~TpLh~Aa~~---g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~ 621 (638)
.|.||||+|+.. |+.+++++||++|+++|.+|..|+||||+|+..|+.++|++||++|++++.+|..|.|||++|+.
T Consensus 189 ~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~ 268 (301)
T 2b0o_E 189 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK 268 (301)
T ss_dssp CEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 789999999987 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHhhCCC
Q 006616 622 SNFADSEVLAILSDSHG 638 (638)
Q Consensus 622 ~g~~d~eiv~lLle~ga 638 (638)
.|+ .+++++|+++|+
T Consensus 269 ~~~--~~iv~~Ll~~ga 283 (301)
T 2b0o_E 269 KHH--KECEELLEQAQA 283 (301)
T ss_dssp HTC--HHHHHHHHHHHH
T ss_pred cCC--HHHHHHHHHhcC
Confidence 988 889999988763
No 5
>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=281.85 Aligned_cols=119 Identities=39% Similarity=0.719 Sum_probs=108.2
Q ss_pred cCCchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchH
Q 006616 303 VKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNA 382 (638)
Q Consensus 303 ~~~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~ 382 (638)
.+++++++.|++.|+|+.|||||+++|+|+|+|||||||++||||||+||+|||+||||+|| .|++++|++|+.+||.
T Consensus 12 e~~~~~l~~L~~~p~N~~CaDCg~~~P~WaS~n~GvfiC~~CsgiHR~lG~hiS~VkSl~ld--~w~~~~l~~m~~~GN~ 89 (134)
T 2iqj_A 12 DRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTQEQIQCMQEMGNG 89 (134)
T ss_dssp -CCHHHHHHHTTSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHcCcCCCcCCcCcCCCCCeEEecCCEEEhHhhhHHHhcCCCCCCceeecccc--CCCHHHHHHHHHHchH
Confidence 45678899999999999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHHhhhccccccccCCCCCCCCCCCCccccccCCCCCCCCHHHHHHHHHHHHhhhhhccCCC
Q 006616 383 FANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKYAEKLFVRKPK 448 (638)
Q Consensus 383 ~~n~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~fv~~~~ 448 (638)
.+|++||+.+|+. ..+|.+ .+.+|.||++||++++|+.+..
T Consensus 90 ~an~~~e~~lp~~----------------------~~~P~~---~~~~e~fIr~KY~~k~f~~~~~ 130 (134)
T 2iqj_A 90 KANRLYEAYLPET----------------------FRRPQI---DPAVEGFIRDKYEKKKYMDRSL 130 (134)
T ss_dssp HHHHHHTTTCCSS----------------------CCCCCS---HHHHHHHHHHHHTSCTTCCTTC
T ss_pred HHHHHHHhcCCcc----------------------CCCCCc---hHHHHHHHHHHHhCCeeeCCcc
Confidence 9999999998762 346654 3578999999999999998764
No 6
>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=282.18 Aligned_cols=117 Identities=41% Similarity=0.752 Sum_probs=107.1
Q ss_pred CCchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHH
Q 006616 304 KSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAF 383 (638)
Q Consensus 304 ~~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~ 383 (638)
+.+.+++.|++.|+|+.|||||+++|+|+|+|||||||++||||||+||+||||||||+|| .|++++|++|+.+||..
T Consensus 15 ~~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VkSl~ld--~w~~~~l~~m~~~GN~~ 92 (141)
T 2crr_A 15 QHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTAEQIQCMQDMGNTK 92 (141)
T ss_dssp CHHHHHHHHHHSGGGSSCSSSCCSSCCSEETTTTEECCHHHHHHHHHHCTTTCCCBCSSSS--CCCHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhCccCCcCCCCCCCCCCeEEeccCeEEhhhhhHhHhcCCCCCCeeeECCCC--CCCHHHHHHHHHHccHH
Confidence 4567889999999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHHHhhhccccccccCCCCCCCCCCCCccccccCCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 006616 384 ANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKYAEKLFVRKP 447 (638)
Q Consensus 384 ~n~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~fv~~~ 447 (638)
+|++||+.+|+. ..+|.++ ..+|.||++||++++|+.+.
T Consensus 93 an~~~e~~lp~~----------------------~~~P~~~---~~~e~fIr~KY~~k~f~~~~ 131 (141)
T 2crr_A 93 ARLLYEANLPEN----------------------FRRPQTD---QAVEFFIRDKYEKKKYYDKN 131 (141)
T ss_dssp HHHHGGGSCCTT----------------------CCCCCSH---HHHHHHHHHHHTSCTTCCCG
T ss_pred HHHHHHhcCCcc----------------------cCCCCch---HHHHHHHHHHHhcCcccCCC
Confidence 999999998862 3466543 56899999999999999764
No 7
>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A
Probab=100.00 E-value=9.5e-37 Score=273.80 Aligned_cols=120 Identities=27% Similarity=0.566 Sum_probs=106.6
Q ss_pred CCchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHH
Q 006616 304 KSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAF 383 (638)
Q Consensus 304 ~~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~ 383 (638)
++++.++.|++.|||+.|||||+++|+|+|+|||||||++||||||+||+| ||||||+|| .|++++|++|+.+||..
T Consensus 11 ~~~~~l~~l~~~p~N~~CaDCg~~~P~WaS~n~GvfiC~~CsgiHR~LG~~-s~VrSl~ld--~w~~~~l~~m~~~GN~~ 87 (140)
T 2olm_A 11 KHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPP-HRVKSISMT--TFTQQEIEFLQKHGNEV 87 (140)
T ss_dssp HHHHHHHHHHTSGGGGSCTTTCSSCCCEEETTTTEEECHHHHHHHTTSSSC-CCEEETTTC--CCCHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHhcCcCCCcCCCCCCCCCCceeeccCEEEchhccchhccCCCc-ceeeecCCC--CCCHHHHHHHHHhccHH
Confidence 356788889999999999999999999999999999999999999999997 999999999 79999999999999999
Q ss_pred HHHHHHhhhccccccccCCCCCCCCCCCCccccccCCCCCCCCHHHHHHHHHHHHhhhhhccCCC
Q 006616 384 ANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKYAEKLFVRKPK 448 (638)
Q Consensus 384 ~n~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~fv~~~~ 448 (638)
+|++||+.+++.. ..+|.+.+. ..++.||++||++++|+.++.
T Consensus 88 an~~~e~~~~~~~---------------------~~~P~~~d~-~~~~~fIr~KYe~k~f~~~~~ 130 (140)
T 2olm_A 88 CKQIWLGLFDDRS---------------------SAIPDFRDP-QKVKEFLQEKYEKKRWYVPPE 130 (140)
T ss_dssp HHHHHTTTCCTTT---------------------SCCCCTTCH-HHHHHHHHHHHTSCTTCCCHH
T ss_pred HHHHHHhhCCccc---------------------CCCCCCCCH-HHHHHHHHHHHcCCeeeCCcc
Confidence 9999999987621 245655443 567789999999999997654
No 8
>2owa_A Arfgap-like finger domain containing protein; zinc finger protein, cysteine-rich motif, GTPase activation; 2.00A {Cryptosporidium parvum iowa II}
Probab=99.98 E-value=4.7e-33 Score=248.14 Aligned_cols=110 Identities=29% Similarity=0.532 Sum_probs=95.9
Q ss_pred chHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHHHH
Q 006616 306 EKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFAN 385 (638)
Q Consensus 306 ~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~~n 385 (638)
+.+++.|++.|+|+.|+|||+++|+|+|+|||||+|++||||||+||+||||||||+|| .|+++++++|+.+||..+|
T Consensus 24 ~~l~~~l~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VrSl~lD--~w~~~~l~~m~~~GN~~an 101 (138)
T 2owa_A 24 DNFFQIVRNRPENRTCFDCESRNPTWLSLSFAVFICLNCSSDHRKMGVHISFVRSSDLD--KFTPIQLVRMDIGGNGRAR 101 (138)
T ss_dssp HHHHHHHHHSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHTTCTTTCCEEETTTS--CCCHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHcCcCCCcCCCCcCCCCCeEEecCCEEEhHhhhHHHhCCCCCCCeeeecCcC--cCCHHHHHHHHhhccHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999 7999999999999999999
Q ss_pred HHHHhhhccccccccCCCCCCCCCCCCccccccCCCCCCCCHHHHHHHHHHHHhhhhh
Q 006616 386 SVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKYAEKLF 443 (638)
Q Consensus 386 ~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~f 443 (638)
++||+.... .| ..+..+..+.++..+|.++.-
T Consensus 102 ~~~e~~~~~-------------------------~~-~~~~~~kY~s~~a~~Y~~kL~ 133 (138)
T 2owa_A 102 NYFKQVLGV-------------------------NF-SPKTKEYASSICGRQYKQILD 133 (138)
T ss_dssp HHHHHHTCT-------------------------TC-CGGGCHHHHSHHHHHHHHHHH
T ss_pred HHHHHHcCC-------------------------CC-CCCHHHHHhhHHHHHHHHHHH
Confidence 999985432 11 112345678889999988753
No 9
>2crw_A ARF GAP 3, ADP-ribosylation factor GTPase-activating protein 3; arfgap domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=7e-32 Score=242.99 Aligned_cols=89 Identities=44% Similarity=0.696 Sum_probs=83.5
Q ss_pred CchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHHH
Q 006616 305 SEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFA 384 (638)
Q Consensus 305 ~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~~ 384 (638)
.+++++.|++.|+|+.|+|||+++|+|+|+|||||||++||||||+||+||||||||+||. .|++++|+.|+.+||..+
T Consensus 16 ~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VrSl~LD~-~W~~~~l~~m~~~GN~~a 94 (149)
T 2crw_A 16 ILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDS-NWSWFQLRCMQVGGNASA 94 (149)
T ss_dssp HHHHHHHHHHSTTTSBCSSSCCBSCCCEETTTTEECCHHHHHHHHHHCTTTCCEECSSSCC-CCCHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhcCcCCCcCCCCcCCCCCcEEeccCEEEchhcchhhccCCCCCCeeeccccCC-CCCHHHHHHHHHHhhHHH
Confidence 4577888999999999999999999999999999999999999999999999999999994 299999999999999999
Q ss_pred HHHHHhhhcc
Q 006616 385 NSVWEELLQS 394 (638)
Q Consensus 385 n~i~e~~~~~ 394 (638)
|++||+....
T Consensus 95 n~~~e~~~~~ 104 (149)
T 2crw_A 95 SSFFHQHGCS 104 (149)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHhcCCC
Confidence 9999987653
No 10
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.97 E-value=1.2e-31 Score=286.04 Aligned_cols=120 Identities=42% Similarity=0.794 Sum_probs=112.9
Q ss_pred CCchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHH
Q 006616 304 KSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAF 383 (638)
Q Consensus 304 ~~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~ 383 (638)
++++.+..|.+.|||..|||||+++|+|||+|+|||||++||||||+| +|||+||||+|| .|++++|++|+.+||..
T Consensus 20 ~~~~~l~~l~~~~~N~~C~dC~~~~p~w~s~~~g~~~C~~Csg~hr~l-~his~v~s~~ld--~w~~~~~~~~~~~gN~~ 96 (386)
T 3lju_X 20 ERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLD--AWEEAQVEFMASHGNDA 96 (386)
T ss_dssp HHHHHHHHHTTSGGGSBCTTTCCBSCCEEETTTTEEECHHHHHHHHTC-TTTCCEEETTTS--CCCHHHHHHHHHSSHHH
T ss_pred HHHHHHHHHhcCcCCCcCccCCCCCCCeEEecccEEEhhhhchHhhCC-Cccceeeeeccc--CCCHHHHHHHHHhcchH
Confidence 467889999999999999999999999999999999999999999999 999999999999 79999999999999999
Q ss_pred HHHHHHhhhccccccccCCCCCCCCCCCCccccccCCCCCCCCHHHHHHHHHHHHhhhhhccCCC
Q 006616 384 ANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKYAEKLFVRKPK 448 (638)
Q Consensus 384 ~n~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~fv~~~~ 448 (638)
+|++||+.+|+. ..+|.++++...||+||++||++++|+.+..
T Consensus 97 ~~~~~e~~~~~~----------------------~~~p~~~~~~~~~e~fIr~KY~~~~f~~~~~ 139 (386)
T 3lju_X 97 ARARFESKVPSF----------------------YYRPTPSDCQLLREQWIRAKYERQEFIYPEK 139 (386)
T ss_dssp HHHHHTTTCCTT----------------------SCCCCTTSCHHHHHHHHHHHHTSCTTTSGGG
T ss_pred HHHHHhccCCcc----------------------CCCCCCccchHHHHHEHHhhhCCCEEECCcc
Confidence 999999998762 4689999999999999999999999998764
No 11
>3dwd_A ADP-ribosylation factor GTPase-activating protein; GAP, structural genomics consorti ER-golgi transport, golgi apparatus, GTPase activation; 2.40A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=237.87 Aligned_cols=85 Identities=39% Similarity=0.732 Sum_probs=80.5
Q ss_pred CchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHHH
Q 006616 305 SEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFA 384 (638)
Q Consensus 305 ~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~~ 384 (638)
++++++.|++.|+|+.|+|||+++|+|+|+|||||||++||||||+||+||||||||+|| .|++++|+.|+.+||.++
T Consensus 25 ~~~~l~~L~~~p~N~~CaDCga~~P~WaS~nlGvfiC~~CSgiHR~LG~hISkVkSl~LD--~W~~~el~~m~~~GN~~a 102 (147)
T 3dwd_A 25 TRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD--KWKDIELEKMKAGGNAKF 102 (147)
T ss_dssp HHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEESCC----CCHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHcCcCCCccCCCCCCCCCeEEecccEeEhHhhChHHhcCCCCCCcccccccc--CCCHHHHHHHHHHhhHHH
Confidence 567889999999999999999999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHhh
Q 006616 385 NSVWEEL 391 (638)
Q Consensus 385 n~i~e~~ 391 (638)
|++||+.
T Consensus 103 n~~~ea~ 109 (147)
T 3dwd_A 103 REFLESQ 109 (147)
T ss_dssp HHHHHTS
T ss_pred HHHHHhC
Confidence 9999974
No 12
>2p57_A GTPase-activating protein ZNF289; zinc finger, GAP, structural genomics, structural genomics consortium, SGC, metal binding protein; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.9e-30 Score=231.21 Aligned_cols=86 Identities=44% Similarity=0.774 Sum_probs=81.0
Q ss_pred CchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHHH
Q 006616 305 SEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFA 384 (638)
Q Consensus 305 ~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~~ 384 (638)
.+.+++.|++.|+|+.|+|||+++|+|+|+|||||||++||||||+||+|||+||||+||. .|+++++++|+.+||.++
T Consensus 24 ~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hIS~VrSl~LD~-~W~~~~l~~m~~~GN~~a 102 (144)
T 2p57_A 24 IQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS-NWNWFQLRCMQVGGNANA 102 (144)
T ss_dssp HHHHHHHHHHSGGGGBCTTTCCBSCCEEEGGGTEEECHHHHHHHHHHCTTTCCEEESSSCC-CCCHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHhcCCCCCcCCCCcCCCCCeEEeccCEEEhhhchHHHcCCCCCCCeeeecccCC-CCCHHHHHHHHHhCHHHH
Confidence 3467788899999999999999999999999999999999999999999999999999993 399999999999999999
Q ss_pred HHHHHhh
Q 006616 385 NSVWEEL 391 (638)
Q Consensus 385 n~i~e~~ 391 (638)
|++||+.
T Consensus 103 n~~~e~~ 109 (144)
T 2p57_A 103 TAFFRQH 109 (144)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9999975
No 13
>3sub_A ADP-ribosylation factor GTPase-activating protein; protein trafficking, hydrolase AC; 2.40A {Plasmodium falciparum 3D7}
Probab=99.96 E-value=3.3e-30 Score=232.34 Aligned_cols=86 Identities=40% Similarity=0.772 Sum_probs=80.3
Q ss_pred chHHHHHHcc-cCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHHH
Q 006616 306 EKPIDVLRRV-CGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFA 384 (638)
Q Consensus 306 ~~~~~~~~~~-~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~~ 384 (638)
+++++.|++. |+|+.|+|||+++|+|+|+|||||+|++||||||+||+||||||||+|| .|++++|++|+.+||..+
T Consensus 9 ~~~l~~L~~~~p~N~~CaDCga~~P~WaS~nlGvflCi~CSGiHR~LG~hISkVKSltLD--~Wt~e~l~~m~~~GN~~a 86 (163)
T 3sub_A 9 VEFINRLKKEDESNNKCFDCGISNPDWVSVNHGIFLCINCSGVHRSLGVHISIVRSIKMD--IFTDEQLKYIDKGGNKKC 86 (163)
T ss_dssp HHHHHHHHHHSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHHTCTTTCCEEETTTC--CCCHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHhCCCCCCccccCCCCCCCeEEecCCeeEHHhhhHHhcCCCCCCCeeeecccc--CcCHHHHHHHHhhCHHHH
Confidence 4567777765 8999999999999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHhhhc
Q 006616 385 NSVWEELLQ 393 (638)
Q Consensus 385 n~i~e~~~~ 393 (638)
|.+||....
T Consensus 87 n~~~e~~g~ 95 (163)
T 3sub_A 87 QTYLENYGI 95 (163)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 999998554
No 14
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=5.6e-29 Score=236.00 Aligned_cols=158 Identities=28% Similarity=0.423 Sum_probs=139.8
Q ss_pred ccccceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccC
Q 006616 455 SVAHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAG 534 (638)
Q Consensus 455 ~~~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~ 534 (638)
+++++|+.|++.|+.+.|. +|++.|+|||..+..+ .++++.+........+..|+.
T Consensus 3 dlg~~L~~Aa~~G~~~~v~-~Ll~~Gadvn~~d~~g-----------------------~t~l~~a~~~~~~~~~~~ll~ 58 (169)
T 4gpm_A 3 ELGKRLIEAAENGNKDRVK-DLIENGADVNASDSDG-----------------------RTPLHHAAENGHKEVVKLLIS 58 (169)
T ss_dssp HHHHHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTS-----------------------CCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHH-HHHHCCCCCCCcCCCC-----------------------CCHHHHHHHcCCHHHHHHHHh
Confidence 4567899999999987765 5568999999988776 223334444555667777889
Q ss_pred CCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCC
Q 006616 535 TSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKT 614 (638)
Q Consensus 535 ~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~T 614 (638)
.|++++..|.+|+||||+|+..|+.++|++||++|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|.+|.|
T Consensus 59 ~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~T 138 (169)
T 4gpm_A 59 KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRT 138 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 615 SLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 615 pL~~A~~~g~~d~eiv~lLle~ga 638 (638)
||++|+..|+ .+++++|+++||
T Consensus 139 pL~~A~~~g~--~~iv~~Ll~~GA 160 (169)
T 4gpm_A 139 PLDLAREHGN--EEVVKLLEKQGG 160 (169)
T ss_dssp HHHHHHHTTC--HHHHHHHHTC--
T ss_pred HHHHHHHcCC--HHHHHHHHHCCC
Confidence 9999999998 899999999997
No 15
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.94 E-value=2.1e-26 Score=246.92 Aligned_cols=172 Identities=26% Similarity=0.435 Sum_probs=126.1
Q ss_pred ChhhhhHHHhHHHHH-hhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCCCcccccc
Q 006616 1 MDAHLRYFKQGYELL-HQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQIDRESRWASNGSNGSPNGDGIQAIGR 79 (638)
Q Consensus 1 ~~a~~~ff~~G~~l~-~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (638)
|+||++|||+||+++ ++++||+++|...++++|+.++++++.+.+.+++++...+. ... |..+.
T Consensus 204 ~~a~~~ff~~g~~~~~~~~~~~~~~l~~~l~~~r~~~~~~~~~~~~~~~~l~~~~~~----~~~-----~~~~~------ 268 (385)
T 2q13_A 204 MQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEVASDP----LYV-----PDPDP------ 268 (385)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG----GSS-----SSCCT------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC----CCC-----CCCcc------
Confidence 579999999999998 59999999999999999999999998888887776542111 110 11100
Q ss_pred chhHHHHHHHhhhcCCCcceeEEEEEEeecCC--CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccC
Q 006616 80 SSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSN--LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGS 157 (638)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~k~GyL~Kr~~~--~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~ 157 (638)
+ + .......++|+|||+|+++. .++.|+||||||+ ++.|+||++...
T Consensus 269 --~-------~-~~~~~~~~~k~G~L~K~~~~~~~~~~WkkRwfvL~-~~~L~y~k~~~~-------------------- 317 (385)
T 2q13_A 269 --T-------K-FPVNRNLTRKAGYLNARNKTGLVSSTWDRQFYFTQ-GGNLMSQARGDV-------------------- 317 (385)
T ss_dssp --T-------T-SCCCCCCSCCEEEEEEC--------CCEEEEEEEE-TTEEEEECSSCS--------------------
T ss_pred --c-------c-cccCCCCccEEEEEEEecCCCCCcCCceeEEEEEE-CCEEEEecCCCc--------------------
Confidence 0 0 01112356899999999765 3357999999999 567777776321
Q ss_pred CccccccccccCCCCCCccccccceeecccceeecCCCCCCCcceEEEecCC--eeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 158 GLLSRWLSSHYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT--KNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~--rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
.+.+.|+|..|+|++. ++.+|+|||+|++++ ++|+|||+|++||++||.||+.+|..
T Consensus 318 --------------------~~~~~i~l~~~~v~~~-~~~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~ 376 (385)
T 2q13_A 318 --------------------AGGLAMDIDNCSVMAV-DCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNISKQ 376 (385)
T ss_dssp --------------------SCEEEEECTTCEEEEE-CCTTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHHTT
T ss_pred --------------------CCCceEEccceEEEec-cccCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 1224588999998864 345889999999999 99999999999999999999999876
Q ss_pred Hhcc
Q 006616 236 LLSS 239 (638)
Q Consensus 236 ~~~~ 239 (638)
+...
T Consensus 377 ~~~~ 380 (385)
T 2q13_A 377 IYLS 380 (385)
T ss_dssp CC--
T ss_pred hccc
Confidence 5443
No 16
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.94 E-value=1.3e-26 Score=250.50 Aligned_cols=172 Identities=22% Similarity=0.395 Sum_probs=125.3
Q ss_pred ChhhhhHHHhHHHHH-hhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCCCcccccc
Q 006616 1 MDAHLRYFKQGYELL-HQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQIDRESRWASNGSNGSPNGDGIQAIGR 79 (638)
Q Consensus 1 ~~a~~~ff~~G~~l~-~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (638)
|+||.+|||+|++++ +++++|++.+..++++++..++.+++++...++++..... ....|..+..
T Consensus 227 ~~a~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~----- 292 (407)
T 4h8s_A 227 AHGQINFFKKGAEMFSKRMDSFLSSVADMVQSIQVELEAEAEKMRVSQQELLSVDE---------SVYTPDSDVA----- 292 (407)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCT---------TTTCTTSCSS-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc---------cccCCCCCcc-----
Confidence 589999999999997 6799999999999999999998887766665554331110 0011111100
Q ss_pred chhHHHHHHHhhhcCCCcceeEEEEEEeecC--CCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccC
Q 006616 80 SSHKMIEAVMQSAAKGKVQTIRQGYLSKRSS--NLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGS 157 (638)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~k~GyL~Kr~~--~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~ 157 (638)
........+.|+|||+||+. ..+++|+||||||+ ++.|+||+.....+
T Consensus 293 -----------~~~~~~~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~-~~~l~y~~~~~~~~------------------ 342 (407)
T 4h8s_A 293 -----------APQINRNLIQKAGYLNLRNKTGLVTTTWERLYFFTQ-GGNLMCQPRGAVAG------------------ 342 (407)
T ss_dssp -----------SCCCCCSCSCCEEEEEEEEECSSSCEEEEEEEEEEC-SSCEECCCTTCSSC------------------
T ss_pred -----------cccccCCcceeeceeeeeccCCCCCCCceEEEEEEE-CCEEEEEeCCCCCC------------------
Confidence 01122345679999999853 34578999999998 67788876543211
Q ss_pred CccccccccccCCCCCCccccccceeecccceeecCCCCCCCcceEEEecCC--eeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 158 GLLSRWLSSHYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT--KNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~--rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
...++|..|+|++. ++.+|+|||+|++|+ ++|+|||+|++|+++||.||+++|..
T Consensus 343 ----------------------~~~~~l~~~~v~~~-~~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~ 399 (407)
T 4h8s_A 343 ----------------------GLIQDLDNCSVMAV-DCEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNISRQ 399 (407)
T ss_dssp ----------------------CCCBCSSCCEEEEE-CCTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHHSC
T ss_pred ----------------------CeEEECCceEEEEC-CCCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 12367889999974 456899999999986 68999999999999999999999976
Q ss_pred Hhcc
Q 006616 236 LLSS 239 (638)
Q Consensus 236 ~~~~ 239 (638)
+...
T Consensus 400 ~~~~ 403 (407)
T 4h8s_A 400 IYLT 403 (407)
T ss_dssp C---
T ss_pred hhcc
Confidence 6543
No 17
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=99.91 E-value=2.2e-25 Score=233.87 Aligned_cols=87 Identities=38% Similarity=0.715 Sum_probs=83.2
Q ss_pred CCchHHHHHHcccCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHH
Q 006616 304 KSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAF 383 (638)
Q Consensus 304 ~~~~~~~~~~~~~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~ 383 (638)
.+++.++.|++.|+|+.|||||+++|+|+|+|+|||+|++||||||+||+||||||||+|| .|++++++.|+.+||..
T Consensus 23 ~~~~~~~~~~~~~~n~~c~dc~~~~~~~~~~~~~~~~c~~c~~~hr~~~~~~s~v~s~~~~--~~~~~~~~~~~~~gN~~ 100 (329)
T 3o47_A 23 RTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD--KWKDIELEKMKAGGNAK 100 (329)
T ss_dssp CHHHHHHHHHHSTTTTBCTTTCCBSCCEEEGGGTEEECHHHHHHHHHHCTTTCCEEESSSC--CCCHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHcCCCCCcCCCCCCCCCCeEEecCCEEEChhhhhhhcccCCCcCEEeecccc--CCCHHHHHHHHHhCcHH
Confidence 3567889999999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHHHhhh
Q 006616 384 ANSVWEELL 392 (638)
Q Consensus 384 ~n~i~e~~~ 392 (638)
+|++||+..
T Consensus 101 ~n~~~e~~~ 109 (329)
T 3o47_A 101 FREFLESQE 109 (329)
T ss_dssp HHHHHHTCS
T ss_pred HHHHHHhcC
Confidence 999999754
No 18
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.90 E-value=4.5e-24 Score=199.17 Aligned_cols=157 Identities=20% Similarity=0.261 Sum_probs=137.5
Q ss_pred ccccceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccC
Q 006616 455 SVAHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAG 534 (638)
Q Consensus 455 ~~~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~ 534 (638)
+....|+.|+..|+.+.|.. |++.|+++|..+..+ .+++++ +.. +...++.+|+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~-Ll~~~~~~~~~~~~g---------------------~t~L~~--A~~-~~~~~v~~Ll~ 58 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTS-LLQNNVNVNAQNGFG---------------------RTALQV--MKL-GNPEIARRLLL 58 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHH-HTTSCCCTTCCCTTS---------------------CCHHHH--CCS-SCHHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHH-HHhCCCCccccCccC---------------------ccHHHH--HHc-CcHHHHHHHHH
Confidence 34567899999998877654 558999999887655 233333 334 66677888889
Q ss_pred CCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCC-CCCccCCCC
Q 006616 535 TSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGAD-PRAVNREGK 613 (638)
Q Consensus 535 ~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad-~~~~d~~g~ 613 (638)
.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.
T Consensus 59 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~ 138 (162)
T 1ihb_A 59 RGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGD 138 (162)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 599999999
Q ss_pred CHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 614 TSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 614 TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
||||+|+..|+ .+++++|+++||
T Consensus 139 t~l~~A~~~~~--~~~~~~Ll~~GA 161 (162)
T 1ihb_A 139 TACDLARLYGR--NEVVSLMQANGA 161 (162)
T ss_dssp CHHHHHHHTTC--HHHHHHHHHTC-
T ss_pred cHHHHHHHcCC--HHHHHHHHHhCC
Confidence 99999999998 899999999997
No 19
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.89 E-value=2.4e-23 Score=196.29 Aligned_cols=155 Identities=26% Similarity=0.344 Sum_probs=136.8
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCC
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTS 536 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~ 536 (638)
...|+.|+..|+.+.| ++|++.|+|+|..+..+ .++++.+...+...++.+|+..|
T Consensus 15 ~~~l~~A~~~g~~~~v-~~Ll~~g~~~~~~~~~g-----------------------~t~L~~A~~~~~~~~v~~Ll~~g 70 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEV-RILMANGADVNAEDASG-----------------------WTPLHLAAFNGHLEIVEVLLKNG 70 (169)
T ss_dssp HHHHHHHHHHTCHHHH-HHHHHTTCCTTCCCTTS-----------------------CCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cchHHHHHHcCCHHHH-HHHHHCCCCCCCCCCCC-----------------------CCHHHHHHHcCCHHHHHHHHHcC
Confidence 3578889999888766 56668999999887665 22334444455667778888999
Q ss_pred CCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHH
Q 006616 537 EGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSL 616 (638)
Q Consensus 537 ~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL 616 (638)
++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 71 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 150 (169)
T 2y1l_E 71 ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAF 150 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcHHHHHHHhhCC
Q 006616 617 ELAVESNFADSEVLAILSDSH 637 (638)
Q Consensus 617 ~~A~~~g~~d~eiv~lLle~g 637 (638)
++|+..|+ .+++++|++.|
T Consensus 151 ~~A~~~~~--~~~~~~L~~~G 169 (169)
T 2y1l_E 151 DISIDNGN--EDLAEILQKLN 169 (169)
T ss_dssp HHHHHTTC--HHHHHHHHTC-
T ss_pred HHHHHhCC--HHHHHHHHHcC
Confidence 99999998 89999999987
No 20
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.89 E-value=2.7e-23 Score=211.85 Aligned_cols=166 Identities=22% Similarity=0.287 Sum_probs=106.4
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccch-------hhHHHHHhhhhcccc---CCCcccccccccCCccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISS-------LTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSSS 527 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~-------~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~~ 527 (638)
..|+.|+..++...++++|+..|+|||..+..+.++.+ ..++++|+..+.... ....+++..+.......
T Consensus 54 t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~ 133 (269)
T 4b93_B 54 HPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQ 133 (269)
T ss_dssp ---------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred CHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHH
Confidence 45777887777777778888999999998877744333 345555554332211 12233444444555556
Q ss_pred ccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCC
Q 006616 528 GSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRA 607 (638)
Q Consensus 528 ~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~ 607 (638)
++.+|+..|++++..|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+|+..|+.++|++||++|||++.
T Consensus 134 ~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 134 VVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp HHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 67777788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccCCCCCHHHHHHHcC
Q 006616 608 VNREGKTSLELAVESN 623 (638)
Q Consensus 608 ~d~~g~TpL~~A~~~g 623 (638)
+|.+|.||||+|+.++
T Consensus 214 ~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 214 LNKRQRTAVDCAEQNS 229 (269)
T ss_dssp CCTTSCCSGGGSCTTC
T ss_pred cCCCCCCHHHHHHhCC
Confidence 8888888888887665
No 21
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=1e-22 Score=188.90 Aligned_cols=152 Identities=21% Similarity=0.296 Sum_probs=134.6
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCCC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTSE 537 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~ 537 (638)
+.|+.|+..|+.+.+..+|...+.++|..+..+ .++++ . ...+...++.+|+..|+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g---------------------~t~L~--~-~~~~~~~~v~~Ll~~g~ 59 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFG---------------------KTALQ--V-MMFGSTAIALELLKQGA 59 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTS---------------------CCHHH--H-SCTTCHHHHHHHHHTTC
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCccccCCCC---------------------CcHHH--H-HHcCCHHHHHHHHHCCC
Confidence 568899999999988877755566998877665 23333 3 34456667778889999
Q ss_pred CCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHH
Q 006616 538 GQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLE 617 (638)
Q Consensus 538 ~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~ 617 (638)
+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++.+|..|.|||+
T Consensus 60 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~ 138 (156)
T 1bd8_A 60 SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLE 138 (156)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHH
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHcCCCcHHHHHHHhhC
Q 006616 618 LAVESNFADSEVLAILSDS 636 (638)
Q Consensus 618 ~A~~~g~~d~eiv~lLle~ 636 (638)
+|+..|+ .+++++|+++
T Consensus 139 ~A~~~~~--~~~v~~Ll~~ 155 (156)
T 1bd8_A 139 LALQRGA--QDLVDILQGH 155 (156)
T ss_dssp HHHHSCC--HHHHHHHHTT
T ss_pred HHHHcCc--HHHHHHHHhh
Confidence 9999998 8999999975
No 22
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.88 E-value=2.8e-23 Score=194.67 Aligned_cols=156 Identities=28% Similarity=0.367 Sum_probs=135.8
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCC
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTS 536 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~ 536 (638)
...|+.|+..++.+.|..+|...+.+++..+..+ .++++.+...+...++.+|+..|
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g-----------------------~t~L~~A~~~~~~~~v~~Ll~~g 65 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQ-----------------------STPLHFAAGYNRVSVVEYLLQHG 65 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTC-----------------------CCHHHHHHHTTCHHHHHHHHHTT
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCCccccccCC-----------------------CCHHHHHHHcChHHHHHHHHhcC
Confidence 4678999999999988887766777777666544 23344445556677788889999
Q ss_pred CCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHH
Q 006616 537 EGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSL 616 (638)
Q Consensus 537 ~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL 616 (638)
++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 66 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 145 (165)
T 3twr_A 66 ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 145 (165)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTG
T ss_pred CCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcHHHHHHHhhCCC
Q 006616 617 ELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 617 ~~A~~~g~~d~eiv~lLle~ga 638 (638)
++|+. ++ .+|+++|+++||
T Consensus 146 ~~a~~-~~--~~i~~~L~~~gA 164 (165)
T 3twr_A 146 DLVKD-GD--TDIQDLLRGDAA 164 (165)
T ss_dssp GGSCT-TC--HHHHHHHHTC--
T ss_pred HhHhc-CC--hHHHHHHhhccc
Confidence 99876 66 799999999986
No 23
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.88 E-value=6.8e-23 Score=193.44 Aligned_cols=154 Identities=22% Similarity=0.200 Sum_probs=135.3
Q ss_pred cceecccccccchhhhhhhcccccC-ccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVD-VNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTS 536 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaD-vN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~ 536 (638)
..|+.|+..|+.+.|..+| ..|.+ +|..+..+ .++++.+...+...++.+|+..|
T Consensus 4 ~~L~~A~~~g~~~~v~~ll-~~~~~~~~~~~~~g-----------------------~t~L~~A~~~~~~~~v~~Ll~~g 59 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHL-RKGDNLVNKPDERG-----------------------FTPLIWASAFGEIETVRFLLEWG 59 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHH-TTCSGGGGCCCTTS-----------------------CCHHHHHHHTTCHHHHHHHHHHT
T ss_pred hhHHHHHHcCCHHHHHHHH-HcCcccccCCCCCC-----------------------CCHHHHHHHcCCHHHHHHHHHcC
Confidence 3588999999998887776 45554 77776555 23344444556667788888999
Q ss_pred CCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHH
Q 006616 537 EGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSL 616 (638)
Q Consensus 537 ~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL 616 (638)
++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 60 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 139 (172)
T 3v30_A 60 ADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPM 139 (172)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcHHHHHHHhhCC
Q 006616 617 ELAVESNFADSEVLAILSDSH 637 (638)
Q Consensus 617 ~~A~~~g~~d~eiv~lLle~g 637 (638)
|+|+..|+ .+++++|+++|
T Consensus 140 ~~A~~~~~--~~~~~~L~~~~ 158 (172)
T 3v30_A 140 DLAVALGY--RKVQQVIENHI 158 (172)
T ss_dssp HHHHHHTC--HHHHHHHHHHH
T ss_pred HHHHHhCc--HHHHHHHHHHH
Confidence 99999998 89999999876
No 24
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.88 E-value=7.8e-23 Score=192.06 Aligned_cols=154 Identities=20% Similarity=0.239 Sum_probs=135.9
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCCC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTSE 537 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~ 537 (638)
..|+.|+..|+.+.|. .|++.|+++|..+..+ .++++.+...+...++.+|+..|+
T Consensus 5 t~L~~A~~~g~~~~v~-~ll~~~~~~~~~~~~g-----------------------~t~L~~A~~~~~~~~v~~Ll~~g~ 60 (167)
T 3v31_A 5 LSVHQLAAQGEMLYLA-TRIEQENVINHTDEEG-----------------------FTPLMWAAAHGQIAVVEFLLQNGA 60 (167)
T ss_dssp CCHHHHHHTTCHHHHH-HHHHHSSCTTCCCTTS-----------------------CCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred chHHHHHHCCCHHHHH-HHHHcCCCcCCCCCCC-----------------------CCHHHHHHHCCCHHHHHHHHHcCC
Confidence 4688899999887665 4558899999887766 223344444556677788888999
Q ss_pred CCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHH
Q 006616 538 GQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLE 617 (638)
Q Consensus 538 ~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~ 617 (638)
+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||+
T Consensus 61 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 140 (167)
T 3v31_A 61 DPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMD 140 (167)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCcHHHHHHHhhCC
Q 006616 618 LAVESNFADSEVLAILSDSH 637 (638)
Q Consensus 618 ~A~~~g~~d~eiv~lLle~g 637 (638)
+|+..|+ .+++++|++++
T Consensus 141 ~A~~~~~--~~~~~~L~~~~ 158 (167)
T 3v31_A 141 LAVALGY--RSVQQVIESHL 158 (167)
T ss_dssp HHHHHTC--HHHHHHHHHHH
T ss_pred HHHHcCc--HHHHHHHHHHH
Confidence 9999998 89999999864
No 25
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.88 E-value=3.7e-23 Score=196.85 Aligned_cols=157 Identities=24% Similarity=0.206 Sum_probs=140.1
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCC
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTS 536 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~ 536 (638)
...|+.|+..|+...|..+|...+.++|..+..+ .++++.+...+...++.+|+..|
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g-----------------------~t~L~~A~~~~~~~~v~~Ll~~g 62 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHG-----------------------FSPLHWACREGRSAVVEMLIMRG 62 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTS-----------------------CCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCCCC-----------------------CCHHHHHHHcCcHHHHHHHHHcC
Confidence 4678999999999988887766688999887665 23344444555667788888999
Q ss_pred CCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHH
Q 006616 537 EGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSL 616 (638)
Q Consensus 537 ~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL 616 (638)
++++..|..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 63 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 142 (179)
T 3f6q_A 63 ARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPV 142 (179)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGG
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcHHHHHHHhhCCC
Q 006616 617 ELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 617 ~~A~~~g~~d~eiv~lLle~ga 638 (638)
++|+..++ .+++++|+++|+
T Consensus 143 ~~A~~~~~--~~~~~~L~~~g~ 162 (179)
T 3f6q_A 143 DKAKAPLR--ELLRERAEKMGQ 162 (179)
T ss_dssp GGSCHHHH--HHHHHHHHHTTC
T ss_pred HHHHHHHH--HHHHHHHHHhhc
Confidence 99999987 899999999986
No 26
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.87 E-value=3.5e-23 Score=208.42 Aligned_cols=179 Identities=19% Similarity=0.127 Sum_probs=142.4
Q ss_pred cceecccccccchhh---hhhhcccccCccc----cccchhcc----------chhhHHHHHhhhhcccc----------
Q 006616 458 HQIWEGVRTNDKKAV---YRHIVNFEVDVNA----VYEQVSCI----------SSLTLAKAMLLNEQTSL---------- 510 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v---~~lLl~~gaDvN~----~~~~~~~~----------~~~~l~~~ll~~~~~~~---------- 510 (638)
..|+.|+..|+.+.| +++|+..|+|+|. .+..+..+ .+..+++.|+..+....
T Consensus 4 t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 83 (256)
T 2etb_A 4 DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQC 83 (256)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCC
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccccc
Confidence 356777777777643 4455567888876 55555222 33444555554432211
Q ss_pred ----CCCcccccccccCCcccccccccCCCCCCCcCCCC-------------CCcHHHHHHHhCCHHHHHHHHH---cCC
Q 006616 511 ----ERSSSSLTGNSSDRSSSGSLNLAGTSEGQTMDDLE-------------GCTLLHLACDSADIGMLELLLQ---YGA 570 (638)
Q Consensus 511 ----~~~~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~-------------G~TpLh~Aa~~g~~~~v~~Ll~---~ga 570 (638)
....++|+.+...+...++.+|+..|++++..|.. |.||||+|+..|+.+++++|++ +|+
T Consensus 84 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga 163 (256)
T 2etb_A 84 TDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA 163 (256)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred ccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC
Confidence 12344555556666777888899999999999886 9999999999999999999999 999
Q ss_pred CCcccCCCCCcHHHHHHH--hCCHH-------HHHHHHhCCCCC-------CCccCCCCCHHHHHHHcCCCcHHHHHHHh
Q 006616 571 NINATDSRGLTPLHRCIL--RGKAM-------FAKLLLTRGADP-------RAVNREGKTSLELAVESNFADSEVLAILS 634 (638)
Q Consensus 571 dvn~~d~~G~TpLh~A~~--~g~~~-------~v~lLl~~gad~-------~~~d~~g~TpL~~A~~~g~~d~eiv~lLl 634 (638)
++|.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|.||||+|+..|+ .+++++|+
T Consensus 164 ~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~--~~~v~~Ll 241 (256)
T 2etb_A 164 SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGK--IEIFRHIL 241 (256)
T ss_dssp CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTC--HHHHHHHH
T ss_pred CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCC--HHHHHHHH
Confidence 999999999999999999 78888 999999999999 9999999999999999998 89999999
Q ss_pred hCCC
Q 006616 635 DSHG 638 (638)
Q Consensus 635 e~ga 638 (638)
++|+
T Consensus 242 ~~g~ 245 (256)
T 2etb_A 242 QREF 245 (256)
T ss_dssp HHHH
T ss_pred hCCC
Confidence 9863
No 27
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.87 E-value=1.4e-22 Score=187.59 Aligned_cols=150 Identities=21% Similarity=0.250 Sum_probs=129.9
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCC
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTS 536 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~ 536 (638)
.+.|+.|+..|+.+.|. +|++.|++++. +..+ .++++.+...+....+.+|+..|
T Consensus 3 ~~~L~~A~~~g~~~~v~-~Ll~~g~~~~~-~~~g-----------------------~t~L~~A~~~~~~~~v~~Ll~~g 57 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVR-ILMANGAPFTT-DWLG-----------------------TSPLHLAAQYGHFSTTEVLLRAG 57 (153)
T ss_dssp HHHHHHHHHHTCHHHHH-HHHHHTCCCCC-CTTC-----------------------CCHHHHHHHHTCHHHHHHHHTTT
T ss_pred cHHHHHHHHcCCHHHHH-HHHHcCCCCCc-CCCC-----------------------CCHHHHHHHcCCHHHHHHHHHcC
Confidence 45788999999887665 55588998863 3322 23334444445566778888999
Q ss_pred CCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHH
Q 006616 537 EGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSL 616 (638)
Q Consensus 537 ~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL 616 (638)
++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 58 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 137 (153)
T 1awc_B 58 VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAF 137 (153)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcHHHHHHH
Q 006616 617 ELAVESNFADSEVLAIL 633 (638)
Q Consensus 617 ~~A~~~g~~d~eiv~lL 633 (638)
++|+..|+ .+++++|
T Consensus 138 ~~A~~~~~--~~i~~~L 152 (153)
T 1awc_B 138 DISIDNGN--EDLAEIL 152 (153)
T ss_dssp HHHHHTTC--HHHHHHH
T ss_pred HHHHHcCC--HHHHHHh
Confidence 99999998 8999987
No 28
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.87 E-value=1.1e-22 Score=195.74 Aligned_cols=154 Identities=22% Similarity=0.166 Sum_probs=135.8
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCCC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTSE 537 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~ 537 (638)
..|+.|+..++.+.| ++|++.|+|+|..+..+ .++++.+...+...++.+|+..|+
T Consensus 37 t~L~~A~~~g~~~~v-~~Ll~~~~~~~~~~~~g-----------------------~t~L~~A~~~~~~~~v~~Ll~~g~ 92 (192)
T 2rfm_A 37 TPLMVACMLGMENAI-DKLVENFDKLEDKDIEG-----------------------STALIWAVKNNRLGIAEKLLSKGS 92 (192)
T ss_dssp CHHHHHHHHTCGGGH-HHHHHHHCCTTCCCTTS-----------------------CCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred CHHHHHHHcCCHHHH-HHHHHhccccccccccC-----------------------ccHHHHHHHcCCHHHHHHHHHCCC
Confidence 568888888877655 56668899999877655 233444445556677788888999
Q ss_pred CCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHH
Q 006616 538 GQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLE 617 (638)
Q Consensus 538 ~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~ 617 (638)
+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||+
T Consensus 93 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 172 (192)
T 2rfm_A 93 NVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEA 172 (192)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCcHHHHHHHhhCC
Q 006616 618 LAVESNFADSEVLAILSDSH 637 (638)
Q Consensus 618 ~A~~~g~~d~eiv~lLle~g 637 (638)
+|+..|+ .+++++|+++|
T Consensus 173 ~A~~~~~--~~~v~~Ll~~~ 190 (192)
T 2rfm_A 173 SARIFGR--QEVIKIFTEVR 190 (192)
T ss_dssp HHHHTTC--HHHHHHHHHHH
T ss_pred HHHHhCc--HHHHHHHHhcc
Confidence 9999998 89999999865
No 29
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.87 E-value=1.9e-22 Score=199.73 Aligned_cols=179 Identities=21% Similarity=0.181 Sum_probs=147.3
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhccc--------cCCCccccccccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTS--------LERSSSSLTGNSS 522 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~--------~~~~~~~l~~~~~ 522 (638)
..|+.|+..|+.+.|..+|...|+|+|..+..+..+ .+..+++.|+..+... .....++++.+..
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~ 84 (232)
T 2rfa_A 5 SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVI 84 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHH
Confidence 468889988888877666644599999988776443 3346666666554332 0123445555556
Q ss_pred CCcccccccccCCCCCCCcCCC-------------CCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHh
Q 006616 523 DRSSSGSLNLAGTSEGQTMDDL-------------EGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILR 589 (638)
Q Consensus 523 ~~~~~~~~lL~~~~~~~~~~d~-------------~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~ 589 (638)
.+...++.+|+..|++++..+. .|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~ 164 (232)
T 2rfa_A 85 NQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQ 164 (232)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTC
T ss_pred cCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 6677788889999999998865 799999999999999999999999999999999999999999999
Q ss_pred CCHHHH----HHHHhCCCCC------CCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 590 GKAMFA----KLLLTRGADP------RAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 590 g~~~~v----~lLl~~gad~------~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
|+.+++ ++|+++|+++ +.+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 165 ~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~--~~~v~~Ll~~g~ 221 (232)
T 2rfa_A 165 PNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGN--IVMFQHLMQKRK 221 (232)
T ss_dssp SCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTC--HHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCC--HHHHHHHHhcCc
Confidence 999988 9999999998 5899999999999999998 999999999863
No 30
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.87 E-value=5.1e-22 Score=191.87 Aligned_cols=177 Identities=20% Similarity=0.240 Sum_probs=132.2
Q ss_pred ceecccccccchhhhhhhcccccCccccccchhccc-------hhhHHHHHhhhhcccc---CCCcccccccccCCcccc
Q 006616 459 QIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCIS-------SLTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSSSG 528 (638)
Q Consensus 459 ~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~-------~~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~~~ 528 (638)
.|+.|+..++...|..+|...++++|..+..+..+. +..+++.|+..+.+.. ....++++.+...+...+
T Consensus 8 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 87 (201)
T 3hra_A 8 ALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEI 87 (201)
T ss_dssp HHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 455555555555555555444445555544442222 2234444443222111 111333444444455555
Q ss_pred ccccc-CCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHhCC-----HHHHHHHHhC
Q 006616 529 SLNLA-GTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYG-ANINATDSRGLTPLHRCILRGK-----AMFAKLLLTR 601 (638)
Q Consensus 529 ~~lL~-~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~-----~~~v~lLl~~ 601 (638)
+.+|+ ..+++++..|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..+. .+++++|+++
T Consensus 88 ~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ 167 (201)
T 3hra_A 88 LAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN 167 (201)
T ss_dssp HHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT
T ss_pred HHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC
Confidence 66666 788899999999999999999999999999999999 9999999999999999999998 9999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCC
Q 006616 602 GADPRAVNREGKTSLELAVESNFADSEVLAILSDSH 637 (638)
Q Consensus 602 gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~g 637 (638)
|++++.+|..|.||||+|+..|+ .+++++|+++|
T Consensus 168 ga~~~~~~~~g~t~l~~A~~~~~--~~~~~~Ll~~G 201 (201)
T 3hra_A 168 GADQSIKDNSGRTAMDYANQKGY--TEISKILAQYN 201 (201)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTC--HHHHHHHHTCC
T ss_pred CCCCCccCCCCCCHHHHHHHcCC--HhHHHHHHhcC
Confidence 99999999999999999999998 89999999987
No 31
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.87 E-value=7e-22 Score=194.17 Aligned_cols=179 Identities=17% Similarity=0.180 Sum_probs=148.8
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhccc----cCCCcccccccccCCc
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTS----LERSSSSLTGNSSDRS 525 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~----~~~~~~~l~~~~~~~~ 525 (638)
...|+.|+..++.+. +++|++.|+|+|..+..+..+ .+..+++.++...... .....++++.+...+.
T Consensus 26 ~t~L~~A~~~g~~~~-v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~ 104 (223)
T 2f8y_A 26 ETALHLAARYSRSDA-AKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAV 104 (223)
T ss_dssp CCHHHHHHHTTCHHH-HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTC
T ss_pred CchHHHHHHcCCHHH-HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCc
Confidence 356888888887664 566668999999988766333 3346666666544311 1122344555555566
Q ss_pred ccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCC
Q 006616 526 SSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADP 605 (638)
Q Consensus 526 ~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~ 605 (638)
..++.+|+..|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 105 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 105 EGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 184 (223)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 77788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 606 RAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 606 ~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+.+|..|.|||++|+..++ .+++++|+++|+
T Consensus 185 ~~~~~~g~t~l~~A~~~~~--~~i~~~L~~~g~ 215 (223)
T 2f8y_A 185 DITDHMDRLPRDIAQERMH--HDIVRLLDEYNL 215 (223)
T ss_dssp TCCCTTCCCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred ccccccCCCHHHHHHHhcc--hHHHHHHHHcCC
Confidence 9999999999999999998 899999999985
No 32
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.87 E-value=4.7e-22 Score=188.23 Aligned_cols=118 Identities=31% Similarity=0.466 Sum_probs=111.5
Q ss_pred ccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHH
Q 006616 519 GNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLL 598 (638)
Q Consensus 519 ~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lL 598 (638)
.+...+....+..|+..|+++|..|.+|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.++|++|
T Consensus 10 ~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~L 89 (169)
T 4gpm_A 10 EAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLL 89 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHH
Confidence 34455667778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 599 LTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 599 l~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+++|++++.+|.+|.||||+|+..|+ .++|++|+++||
T Consensus 90 l~~gadvn~~d~~G~TpLh~A~~~g~--~~~v~~Ll~~ga 127 (169)
T 4gpm_A 90 ISKGADVNAKDSDGRTPLHHAAENGH--KEVVKLLISKGA 127 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred HHCcCCCCCCCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 99999999999999999999999998 899999999986
No 33
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.87 E-value=1.2e-22 Score=184.54 Aligned_cols=120 Identities=19% Similarity=0.195 Sum_probs=111.5
Q ss_pred cccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHHhCCHHH
Q 006616 516 SLTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSR-GLTPLHRCILRGKAMF 594 (638)
Q Consensus 516 ~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~-G~TpLh~A~~~g~~~~ 594 (638)
+++.+...+....+..|+..|++++..|..|+||||+|+. |+.+++++|+++|++++.+|.. |+||||+|+..|+.++
T Consensus 15 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 93 (136)
T 1d9s_A 15 GLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDT 93 (136)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 4444555566777888888999999999999999999999 9999999999999999999999 9999999999999999
Q ss_pred HHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 595 AKLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 595 v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+++|+++|++++.+|..|.||||+|+..++ .+++++|+++||
T Consensus 94 v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~--~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 94 LVVLHRAGARLDVCDAWGRLPVDLAEEQGH--RDIARYLHAATG 135 (136)
T ss_dssp HHHHHHTCCCCCCCSSSSSCHHHHHHHHTC--HHHHHHHHHHHC
T ss_pred HHHHHHcCCCCCccCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 999999999999999999999999999998 899999999986
No 34
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.87 E-value=4.9e-22 Score=204.31 Aligned_cols=156 Identities=22% Similarity=0.237 Sum_probs=128.1
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCC
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTS 536 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~ 536 (638)
...|+.|+..|+.+.|. +|++.|+|+|..+..+ .++++.+...+...++.+|+..|
T Consensus 41 ~t~l~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g-----------------------~t~L~~A~~~g~~~~v~~Ll~~g 96 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVL-RLLERGADINYANVDG-----------------------LTALHQACIDDNVDMVKFLVENG 96 (299)
T ss_dssp HHHHHHHHHHTCHHHHH-HHHHHCCCTTCBCTTC-----------------------CBHHHHHHHTTCHHHHHHHHHTT
T ss_pred ccHHHHHHHcCCHHHHH-HHHHcCCCCcccCCCC-----------------------CCHHHHHHHcCCHHHHHHHHHCC
Confidence 35688888888877665 5558999999887665 23334444455566777777888
Q ss_pred CCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCC---------------------------------------
Q 006616 537 EGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDS--------------------------------------- 577 (638)
Q Consensus 537 ~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~--------------------------------------- 577 (638)
++++..|..|.||||+|+..|+.+++++|+++|++++..|.
T Consensus 97 a~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 176 (299)
T 1s70_B 97 ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERI 176 (299)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhH
Confidence 88888888888888888888888888888888888776553
Q ss_pred ---------------------CCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhC
Q 006616 578 ---------------------RGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDS 636 (638)
Q Consensus 578 ---------------------~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ 636 (638)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|+++
T Consensus 177 ~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~--~~~v~~Ll~~ 254 (299)
T 1s70_B 177 MLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGK--EEACRILVEN 254 (299)
T ss_dssp HHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTC--HHHHHHHHHT
T ss_pred HHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCC--HHHHHHHHHc
Confidence 47788999999999999999999999999999999999999999998 8999999999
Q ss_pred CC
Q 006616 637 HG 638 (638)
Q Consensus 637 ga 638 (638)
||
T Consensus 255 ga 256 (299)
T 1s70_B 255 LC 256 (299)
T ss_dssp TC
T ss_pred CC
Confidence 86
No 35
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.86 E-value=6.7e-22 Score=201.02 Aligned_cols=178 Identities=20% Similarity=0.191 Sum_probs=132.6
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccc-------hhhHHHHHhhhhccccC-----------------CC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCIS-------SLTLAKAMLLNEQTSLE-----------------RS 513 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~-------~~~l~~~ll~~~~~~~~-----------------~~ 513 (638)
..|+.|+..++.+ ++++|++.|+|+|..+..+..+. +..+++.|+........ ..
T Consensus 47 t~L~~A~~~g~~~-~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (282)
T 1oy3_D 47 TALHLAAILGEAS-TVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH 125 (282)
T ss_dssp CHHHHHHHHTCHH-HHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------
T ss_pred CHHHHHHHcCCHH-HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhc
Confidence 5678888877765 55677799999998887664333 33555555543221100 00
Q ss_pred cccccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHHhCCH
Q 006616 514 SSSLTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSR-GLTPLHRCILRGKA 592 (638)
Q Consensus 514 ~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~-G~TpLh~A~~~g~~ 592 (638)
..................+...+.+++..|..|.||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~ 205 (282)
T 1oy3_D 126 APAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAA 205 (282)
T ss_dssp ------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred chhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCH
Confidence 01111112222233344556667789999999999999999999999999999999999999865 99999999999999
Q ss_pred HHHHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 593 MFAKLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 593 ~~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
++|++|+++|++++.+|..|.||||+|+..|+ .+++++|+++||
T Consensus 206 ~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~--~~~v~~Ll~~ga 249 (282)
T 1oy3_D 206 SVLELLLKAGADPTARMYGGRTPLGSALLRPN--PILARLLRAHGA 249 (282)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSC--HHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCcccccCCCCHHHHHHHcCC--cHHHHHHHHcCC
Confidence 99999999999999999999999999999998 899999999996
No 36
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.86 E-value=1.1e-21 Score=197.48 Aligned_cols=176 Identities=17% Similarity=0.169 Sum_probs=144.9
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccch-------hhHHHHHhhhhccc----cCCCcccccccccCCcc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISS-------LTLAKAMLLNEQTS----LERSSSSLTGNSSDRSS 526 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~-------~~l~~~ll~~~~~~----~~~~~~~l~~~~~~~~~ 526 (638)
..|+.|+..++.+ ++++|++.|+|+|..+..+..+.+ ..+++.|+...... .....++++.+...+..
T Consensus 59 t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~ 137 (253)
T 1yyh_A 59 TALHLAARYSRSD-AAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVE 137 (253)
T ss_dssp CHHHHHHHTTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCS
T ss_pred cHHHHHHHcCCHH-HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChH
Confidence 5678888887765 456777899999998877644433 35566666543311 11223444444555566
Q ss_pred cccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC
Q 006616 527 SGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPR 606 (638)
Q Consensus 527 ~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~ 606 (638)
.++.+|+..|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 138 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 138 GMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp SHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 77888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHcCCCcHHHHHHHhhC
Q 006616 607 AVNREGKTSLELAVESNFADSEVLAILSDS 636 (638)
Q Consensus 607 ~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ 636 (638)
.+|..|.|||++|+..|+ .+|+++|...
T Consensus 218 ~~d~~g~tpl~~A~~~g~--~~i~~~l~~~ 245 (253)
T 1yyh_A 218 ITDHMDRLPRDIAQERMH--HDIVRLLDLE 245 (253)
T ss_dssp CCCTTCCCHHHHHHHTTC--HHHHHHHHC-
T ss_pred ccccCCCCHHHHHHHcCC--HHHHHHHHHH
Confidence 999999999999999999 8999999864
No 37
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.86 E-value=2.1e-22 Score=203.10 Aligned_cols=179 Identities=15% Similarity=0.110 Sum_probs=143.2
Q ss_pred cceecccccccchhhhhhh---cccccCccccc----cchhc----------cchhhHHHHHhhhhcccc----------
Q 006616 458 HQIWEGVRTNDKKAVYRHI---VNFEVDVNAVY----EQVSC----------ISSLTLAKAMLLNEQTSL---------- 510 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lL---l~~gaDvN~~~----~~~~~----------~~~~~l~~~ll~~~~~~~---------- 510 (638)
..|+.|++.|+.+.|..+| +..|+++|..+ ..+.. ..+..+++.|+..+....
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 86 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPF 86 (260)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCB
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccc
Confidence 4678888888887754444 35888888665 22322 244555666665432110
Q ss_pred ----CCCcccccccccCCcccccccccCCCCCCCcCC--------------CCCCcHHHHHHHhCCHHHHHHHHH---cC
Q 006616 511 ----ERSSSSLTGNSSDRSSSGSLNLAGTSEGQTMDD--------------LEGCTLLHLACDSADIGMLELLLQ---YG 569 (638)
Q Consensus 511 ----~~~~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d--------------~~G~TpLh~Aa~~g~~~~v~~Ll~---~g 569 (638)
....++|+.+...+...++.+|+..|++++..+ ..|.||||+|+..|+.++|++|++ +|
T Consensus 87 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 166 (260)
T 3jxi_A 87 RDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166 (260)
T ss_dssp CCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 023345555556677778889999999999998 689999999999999999999999 99
Q ss_pred CCCcccCCCCCcHHHHHHHhCC---------HHHHHHHHhCCCCC-------CCccCCCCCHHHHHHHcCCCcHHHHHHH
Q 006616 570 ANINATDSRGLTPLHRCILRGK---------AMFAKLLLTRGADP-------RAVNREGKTSLELAVESNFADSEVLAIL 633 (638)
Q Consensus 570 advn~~d~~G~TpLh~A~~~g~---------~~~v~lLl~~gad~-------~~~d~~g~TpL~~A~~~g~~d~eiv~lL 633 (638)
+++|.+|..|+||||+|+..++ .+++++|+++|+++ +.+|..|.||||+|+..|+ .++|++|
T Consensus 167 a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~--~~~v~~L 244 (260)
T 3jxi_A 167 ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK--IGIFQHI 244 (260)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC--HHHHHHH
T ss_pred CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC--HHHHHHH
Confidence 9999999999999999999888 79999999999999 6799999999999999998 9999999
Q ss_pred hhCCC
Q 006616 634 SDSHG 638 (638)
Q Consensus 634 le~ga 638 (638)
+++|+
T Consensus 245 l~~g~ 249 (260)
T 3jxi_A 245 IRREI 249 (260)
T ss_dssp HHHHH
T ss_pred HHhCC
Confidence 99873
No 38
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.85 E-value=2.3e-21 Score=174.78 Aligned_cols=116 Identities=26% Similarity=0.424 Sum_probs=78.2
Q ss_pred cceeEEEEEEeecCC-CCCCceeeEEEEecCceEEEEecCCCC---CCC-CCCccccccCcCcccCCccccccccccCCC
Q 006616 97 VQTIRQGYLSKRSSN-LRGDWKRRFFVLDSRGMLYYYRKQCSK---SSG-SGSQLSSQRNSSELGSGLLSRWLSSHYHGG 171 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~-~~~~WkrRwfvL~~~~~l~y~~~~~~~---~~g-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 171 (638)
..++|+|||+|++++ .+++|++|||||+++++||||++..+. ..+ .+ ++..
T Consensus 2 ~~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i--------------~l~~---------- 57 (128)
T 2rlo_A 2 AIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEM--------------DLLR---------- 57 (128)
T ss_dssp CCEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEE--------------ESSS----------
T ss_pred CcceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhhccccCCCee--------------eeee----------
Confidence 357899999999653 678999999999988999999752110 000 00 0000
Q ss_pred CCCccccccceeecccceeecC-----CCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006616 172 VHDEKSAARHTVNLLTSTIKVD-----ADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASLLS 238 (638)
Q Consensus 172 ~~~~~~~~~~~i~l~~~~v~~~-----~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~~~~ 238 (638)
-....+.+.|.|..|++.+. +...+++|||.|++++ ++|+|+|+|++|+++||+||+.+|..+++
T Consensus 58 --~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~l~ 128 (128)
T 2rlo_A 58 --TTVKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQ 128 (128)
T ss_dssp --CEEECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHHHHC
T ss_pred --eEEecCCCccccccccccccccccccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHHcC
Confidence 00011222244444443311 1111578999999998 99999999999999999999999988764
No 39
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.85 E-value=9e-22 Score=208.79 Aligned_cols=179 Identities=13% Similarity=0.055 Sum_probs=146.2
Q ss_pred ccceecccccccchhhhhhhcccccCccccccch-----hccchhhHHHHHhhhh-------------------------
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQV-----SCISSLTLAKAMLLNE------------------------- 506 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~-----~~~~~~~l~~~ll~~~------------------------- 506 (638)
...|+.|+..++.+ ++++|++.|++++..++.. ....+..+++.|+...
T Consensus 54 ~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (364)
T 3ljn_A 54 CTALHLACKFGCVD-TAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSH 132 (364)
T ss_dssp CCHHHHHHHHCCHH-HHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTE
T ss_pred CcHHHHHHHcCCHH-HHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccc
Confidence 35678888877665 5677779999888754433 2334456666666541
Q ss_pred -ccccCCCcccccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCC-----CcccCCCCC
Q 006616 507 -QTSLERSSSSLTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGAN-----INATDSRGL 580 (638)
Q Consensus 507 -~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad-----vn~~d~~G~ 580 (638)
.+..+.+++++++........++.+|+..|++++..|..|.||||+|+..|+.+++++|+++|++ +|.+|..|+
T Consensus 133 ~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 133 VKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp EEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCC
T ss_pred cCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCC
Confidence 22223444444443332277788889999999999999999999999999999999999999999 999999999
Q ss_pred cHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 581 TPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 581 TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+ .++|++|+++|+
T Consensus 213 t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~--~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 213 SHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAM--VLLTKELLQKTD 268 (364)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCC--HHHHHHHHHHSC
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCh--HHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999998 999999999875
No 40
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=200.56 Aligned_cols=157 Identities=22% Similarity=0.260 Sum_probs=134.3
Q ss_pred cceecccccccchhhhhhhccccc-CccccccchhccchhhHHHHHhhhhccccCCCcccccccc---cCCccccccccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEV-DVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNS---SDRSSSGSLNLA 533 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~ga-DvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~---~~~~~~~~~lL~ 533 (638)
..|+.|+..++.+. +++|++.|+ ++|..+..+ .+++++++.. .......+..|+
T Consensus 113 T~Lh~A~~~g~~~~-v~~Ll~~g~~~~~~~~~~g---------------------~tpL~~a~~~~~~~~~~~~~v~~Ll 170 (276)
T 4hbd_A 113 TALHYSVSHANFPV-VQQLLDSGVCKVDKQNRAG---------------------YSPIMLTALATLKTQDDIETVLQLF 170 (276)
T ss_dssp CHHHHHHHTTCHHH-HHHHHHTSCCCTTCCCTTS---------------------CCHHHHGGGCCCCSHHHHHHHHHHH
T ss_pred CHHHHHHHCCCHHH-HHHHHHCCCCcCCCCCCCC---------------------CCHHHHHHHHHhhhhhhHHHHHHHH
Confidence 57888888887764 566678898 999887766 2333333221 334455667788
Q ss_pred CCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHh-CCCCCCCccCCC
Q 006616 534 GTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLT-RGADPRAVNREG 612 (638)
Q Consensus 534 ~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~-~gad~~~~d~~g 612 (638)
..|++++..|..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|
T Consensus 171 ~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g 250 (276)
T 4hbd_A 171 RLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDG 250 (276)
T ss_dssp HHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTS
T ss_pred HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCC
Confidence 8889999999999999999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred CCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 613 KTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 613 ~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
.||||+|+..|+ .+++++|+++++
T Consensus 251 ~TpL~~A~~~g~--~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 251 STALMVALDAGQ--SEIASMLYSRMN 274 (276)
T ss_dssp CCHHHHHHHHTC--HHHHHHHHHHCC
T ss_pred CCHHHHHHHcCC--HHHHHHHHhccC
Confidence 999999999998 899999998763
No 41
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.85 E-value=3.1e-21 Score=190.59 Aligned_cols=179 Identities=21% Similarity=0.213 Sum_probs=138.4
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhccch-------hhHHHHHhhhhcccc---CCCcccccccccCCcc
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISS-------LTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSS 526 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~-------~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~ 526 (638)
...|+.|+..++.+ ++++|++.|+++|..+..+..+.+ ..++++|+..+.... ....++++.+...+..
T Consensus 41 ~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 119 (231)
T 3aji_A 41 RTALHWACSAGHTE-IVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRH 119 (231)
T ss_dssp CCHHHHHHHHTCHH-HHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCHHHHHHHcCcHH-HHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 35677888887765 456777899999998877643333 355556655432211 1223445555555666
Q ss_pred cccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC
Q 006616 527 SGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPR 606 (638)
Q Consensus 527 ~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~ 606 (638)
..+.+|+..|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 120 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 120 EIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY 199 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 77778888888998888889999999999999999999999999999988899999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 607 AVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 607 ~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
.+|..|.|||++|+..++ .+++++|+++||
T Consensus 200 ~~~~~g~t~l~~A~~~~~--~~i~~lL~~~~a 229 (231)
T 3aji_A 200 IENKEEKTPLQVAKGGLG--LILKRLAEGEEA 229 (231)
T ss_dssp CCCTTSCCHHHHSCHHHH--HHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHhhHH--HHHHHHHccccc
Confidence 999999999999988776 788888888763
No 42
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.85 E-value=2.4e-21 Score=194.93 Aligned_cols=179 Identities=23% Similarity=0.179 Sum_probs=124.2
Q ss_pred cceecccccc------------cchhhhhhhcccccCcccc-ccchhcc-------chhhHHHHHhhhhcccc---CCCc
Q 006616 458 HQIWEGVRTN------------DKKAVYRHIVNFEVDVNAV-YEQVSCI-------SSLTLAKAMLLNEQTSL---ERSS 514 (638)
Q Consensus 458 ~~L~~Av~~~------------d~~~v~~lLl~~gaDvN~~-~~~~~~~-------~~~~l~~~ll~~~~~~~---~~~~ 514 (638)
..|+.|+..| +...+++.|+..|++++.. +..+..+ .+..+++.|+..+.... ....
T Consensus 12 tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~ 91 (253)
T 1yyh_A 12 TPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGR 91 (253)
T ss_dssp ----------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 4677777765 2556777888999999764 4555333 34466777766543321 1223
Q ss_pred ccccccccCCcccccccccCCCC-CCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHH
Q 006616 515 SSLTGNSSDRSSSGSLNLAGTSE-GQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAM 593 (638)
Q Consensus 515 ~~l~~~~~~~~~~~~~lL~~~~~-~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~ 593 (638)
++++.+...+...++.+|+..++ +++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 92 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 171 (253)
T 1yyh_A 92 TPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD 171 (253)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 44454555556667777777776 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 594 FAKLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 594 ~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
++++|+++|++++.+|..|.||||+|+..|+ .+++++|+++||
T Consensus 172 ~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~--~~~v~~Ll~~ga 214 (253)
T 1yyh_A 172 AAVVLLKNGANKDMQNNREETPLFLAAREGS--YETAKVLLDHFA 214 (253)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC--HHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHCCC--HHHHHHHHHcCC
Confidence 9999999999999999999999999999998 899999999986
No 43
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.85 E-value=6.6e-22 Score=196.59 Aligned_cols=155 Identities=22% Similarity=0.241 Sum_probs=129.2
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCCC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTSE 537 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~ 537 (638)
..|+.|+..++.+ ++++|++.|+|+|..+..+. ++++.+...+...++.+|+..++
T Consensus 47 t~L~~A~~~~~~~-~v~~Ll~~g~~~~~~~~~g~-----------------------t~L~~A~~~~~~~~v~~Ll~~~~ 102 (236)
T 1ikn_D 47 TPLHLAVITNQPE-IAEALLGAGCDPELRDFRGN-----------------------TPLHLACEQGCLASVGVLTQSCT 102 (236)
T ss_dssp CHHHHHHHTTCHH-HHHCCCSCCCCSCCCCTTCC-----------------------CHHHHHHHHTCHHHHHHHHHSTT
T ss_pred CHHHHHHHcCCHH-HHHHHHHcCCCCCCcCCCCC-----------------------CHHHHHHHcCCHHHHHHHHhccc
Confidence 5677787777654 55677789999998776652 22233333344455556666665
Q ss_pred C------CCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccC
Q 006616 538 G------QTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDS-RGLTPLHRCILRGKAMFAKLLLTRGADPRAVNR 610 (638)
Q Consensus 538 ~------~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~-~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~ 610 (638)
+ ++..+..|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 103 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 182 (236)
T 1ikn_D 103 TPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTY 182 (236)
T ss_dssp TTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCT
T ss_pred chhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccC
Confidence 4 567788899999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 611 EGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 611 ~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
.|.|||++|+..|+ .+++++|+++||
T Consensus 183 ~g~tpl~~A~~~~~--~~~~~~Ll~~ga 208 (236)
T 1ikn_D 183 QGYSPYQLTWGRPS--TRIQQQLGQLTL 208 (236)
T ss_dssp TCCCGGGGCTTSSC--HHHHHHHHTTSC
T ss_pred CCCCHHHHHHccCc--hHHHHHHHHcch
Confidence 99999999999998 899999999986
No 44
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.85 E-value=6.7e-21 Score=188.98 Aligned_cols=166 Identities=19% Similarity=0.208 Sum_probs=85.1
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhcccc----CCCcccccccccCCcc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTSL----ERSSSSLTGNSSDRSS 526 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~~----~~~~~~l~~~~~~~~~ 526 (638)
..|+.|+..++.+ ++++|++.|+++|..+..+..+ .+..++++++....... ....++++.+...+..
T Consensus 46 t~L~~A~~~~~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~ 124 (237)
T 3b7b_A 46 TPLMEAAENNHLE-AVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHV 124 (237)
T ss_dssp CHHHHHHHTTCHH-HHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHhCCHH-HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCH
Confidence 3455566555543 3345556666666655544222 22233444443321110 1112233333333444
Q ss_pred cccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC
Q 006616 527 SGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPR 606 (638)
Q Consensus 527 ~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~ 606 (638)
.++.+|+..|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 125 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 125 DLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 44555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CccCCCCCHHHHHHHcCC
Q 006616 607 AVNREGKTSLELAVESNF 624 (638)
Q Consensus 607 ~~d~~g~TpL~~A~~~g~ 624 (638)
.+|..|.||||+|+..++
T Consensus 205 ~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 205 LKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp CCCTTSCCHHHHSCTTCH
T ss_pred ccCCCCCCHHHHHHHHHH
Confidence 555555555555555554
No 45
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.85 E-value=2.6e-21 Score=197.25 Aligned_cols=176 Identities=21% Similarity=0.202 Sum_probs=131.8
Q ss_pred cceecccccccchhhhhhhcccccCc--------cccccchhccchh--------hHHHHHhhhhc-----cccCCCccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDV--------NAVYEQVSCISSL--------TLAKAMLLNEQ-----TSLERSSSS 516 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDv--------N~~~~~~~~~~~~--------~l~~~ll~~~~-----~~~~~~~~~ 516 (638)
+.|+.|+..|+.+.| ++|++.|++. +..+..+..+.+. .++..++..+. +..+.| +
T Consensus 13 ~~L~~A~~~G~~~~v-~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~T--p 89 (269)
T 4b93_B 13 EKLLRAVADGDLEMV-RYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSS--P 89 (269)
T ss_dssp HHHHHHHHTTCHHHH-HHHHTCC----------------------------------------CCCCTTCCCTTSCC--H
T ss_pred hHHHHHHHcCCHHHH-HHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCC--H
Confidence 579999999998765 5566878764 3333333221111 12233333221 222333 4
Q ss_pred ccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHH
Q 006616 517 LTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAK 596 (638)
Q Consensus 517 l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~ 596 (638)
|+.+...+...++.+|+..+++++..+..|.||||+|+..++.+++++|+++|+++|.+|..|+||||+|+..|+.++|+
T Consensus 90 Lh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~ 169 (269)
T 4b93_B 90 LHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVA 169 (269)
T ss_dssp HHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHH
T ss_pred HHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 44455566667788888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 597 LLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 597 lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+||++|++++.+|..|.||||+|+..|+ .++|++|+++||
T Consensus 170 ~Ll~~gadvn~~~~~g~t~Lh~A~~~g~--~~~v~~Ll~~Ga 209 (269)
T 4b93_B 170 LLLQHGASINASNNKGNTALHEAVIEKH--VFVVELLLLHGA 209 (269)
T ss_dssp HHHHTTCCTTCBCTTSCBHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred HHHHCCCCCCccccCCCcHHHHHHHcCC--HHHHHHHHHCCC
Confidence 9999999999999999999999999998 899999999986
No 46
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.85 E-value=9.5e-22 Score=200.02 Aligned_cols=123 Identities=27% Similarity=0.232 Sum_probs=112.1
Q ss_pred cccccccccCCcccccccccCCCCCCCcCCC--------------CCCcHHHHHHHhCCHHHHHHHHH---cCCCCcccC
Q 006616 514 SSSLTGNSSDRSSSGSLNLAGTSEGQTMDDL--------------EGCTLLHLACDSADIGMLELLLQ---YGANINATD 576 (638)
Q Consensus 514 ~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d~--------------~G~TpLh~Aa~~g~~~~v~~Ll~---~gadvn~~d 576 (638)
.++|+.+...+...++.+|+..|++++..+. .|.||||+|+..|+.+++++||+ +|+++|.+|
T Consensus 102 ~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d 181 (273)
T 2pnn_A 102 QTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARD 181 (273)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeC
Confidence 4445555566677788889999999999987 79999999999999999999999 999999999
Q ss_pred CCCCcHHHHHHHhCC---------HHHHHHHHhCCCCCC-------CccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 577 SRGLTPLHRCILRGK---------AMFAKLLLTRGADPR-------AVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 577 ~~G~TpLh~A~~~g~---------~~~v~lLl~~gad~~-------~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
..|+||||+|+..|+ .+++++|+++|++++ .+|..|.||||+|+..|+ .++|++|+++||
T Consensus 182 ~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~--~~iv~~Ll~~ga 257 (273)
T 2pnn_A 182 SVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK--IGVLAYILQREI 257 (273)
T ss_dssp TTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC--HHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhCh--HHHHHHHHHCCC
Confidence 999999999999998 899999999999997 489999999999999998 999999999886
No 47
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.84 E-value=4.9e-22 Score=191.13 Aligned_cols=153 Identities=13% Similarity=0.055 Sum_probs=125.3
Q ss_pred cceecccccccchhhhhhhcccccCccccc-cchhccchhhHHHHHhhhhccccCCCcccccccccCC--cccccccccC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVY-EQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDR--SSSGSLNLAG 534 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~-~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~--~~~~~~lL~~ 534 (638)
..||.|++.|+.+.+..++ .. ++|..+ ..+ .+++++++...+. ...++.+|+.
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~-~~--~~~~~~~~~g---------------------~T~Lh~A~~~~~~~~~~~iv~~Ll~ 63 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELF-EK--GYEDKESVLK---------------------SNILYDVLRNNNDEARYKISMFLIN 63 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHH-HH--SSSCHHHHHT---------------------TTHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHH-hc--CcccccccCC---------------------CCHHHHHHHcCCcchHHHHHHHHHH
Confidence 5799999999999887666 33 455444 222 3444444333221 1236778889
Q ss_pred CCCCCCcCCCCCCcHHHHHHHhCC------HHHHHHHHHcCCCCcccCCCCC-cHHHHHHHhC-----CHHHHHHHHh-C
Q 006616 535 TSEGQTMDDLEGCTLLHLACDSAD------IGMLELLLQYGANINATDSRGL-TPLHRCILRG-----KAMFAKLLLT-R 601 (638)
Q Consensus 535 ~~~~~~~~d~~G~TpLh~Aa~~g~------~~~v~~Ll~~gadvn~~d~~G~-TpLh~A~~~g-----~~~~v~lLl~-~ 601 (638)
.|+++|..|.+|+||||+|+..|+ .+++++||++|+++|.+|..|+ ||||+|+..+ +.+++++|++ +
T Consensus 64 ~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ 143 (186)
T 3t8k_A 64 KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS 143 (186)
T ss_dssp TTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST
T ss_pred CCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc
Confidence 999999999999999999999987 6889999999999999999999 9999999844 4579999999 9
Q ss_pred CCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhC
Q 006616 602 GADPRAVNREGKTSLELAVESNFADSEVLAILSDS 636 (638)
Q Consensus 602 gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ 636 (638)
|++++.+|..|.||||+|+..|+ .++|++|++.
T Consensus 144 gad~~~~d~~G~TpL~~A~~~~~--~~~v~~L~~~ 176 (186)
T 3t8k_A 144 GLQLLIKDKWGLTALEFVKRCQK--PIALKMMEDY 176 (186)
T ss_dssp TCCTTCCCTTSCCHHHHHHTTTC--HHHHHHHHHH
T ss_pred CCCCcccCCCCCCHHHHHHHcCC--HHHHHHHHHH
Confidence 99999999999999999999998 8999999863
No 48
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=1e-20 Score=159.84 Aligned_cols=92 Identities=39% Similarity=0.594 Sum_probs=88.6
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHHcCC
Q 006616 545 EGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVESNF 624 (638)
Q Consensus 545 ~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~ 624 (638)
+|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcHHHHHHHhhCCC
Q 006616 625 ADSEVLAILSDSHG 638 (638)
Q Consensus 625 ~d~eiv~lLle~ga 638 (638)
.+++++|+++||
T Consensus 81 --~~~~~~Ll~~ga 92 (93)
T 1n0q_A 81 --LEVVKLLLEAGA 92 (93)
T ss_dssp --HHHHHHHHHTTC
T ss_pred --HHHHHHHHHcCC
Confidence 899999999997
No 49
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.84 E-value=4.7e-21 Score=173.88 Aligned_cols=120 Identities=28% Similarity=0.413 Sum_probs=110.7
Q ss_pred cccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHH
Q 006616 516 SLTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFA 595 (638)
Q Consensus 516 ~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v 595 (638)
.++.+...+....+..|+..|++++..|..|.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++
T Consensus 17 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v 96 (136)
T 2jab_A 17 KLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIA 96 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHH
Confidence 34455555666677788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCC
Q 006616 596 KLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSH 637 (638)
Q Consensus 596 ~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~g 637 (638)
++|+++|++++.+|..|.||||+|+..|+ .+++++|++.|
T Consensus 97 ~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~--~~~~~~Ll~~G 136 (136)
T 2jab_A 97 EVLLKHGADVNAQDKFGKTAFDISIGNGN--EDLAEILQKLN 136 (136)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHHC-
T ss_pred HHHHHcCCCCcCcCCCCCCHHHHHHHCCC--HHHHHHHHHcC
Confidence 99999999999999999999999999998 89999999987
No 50
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.84 E-value=7.6e-22 Score=197.18 Aligned_cols=154 Identities=23% Similarity=0.265 Sum_probs=109.4
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCCC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTSE 537 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~ 537 (638)
..|+.|+..++.+.+ +.|++.|+|+|.. ..+ .+.++.+...+....+.+|+..|+
T Consensus 7 t~L~~a~~~~~~~~~-~~ll~~g~~~~~~-~~~-----------------------~t~L~~A~~~g~~~~v~~Ll~~g~ 61 (239)
T 1ycs_B 7 VSLPPGKRTNLRKTG-SERIAHGMRVKFN-PLP-----------------------LALLLDSSLEGEFDLVQRIIYEVD 61 (239)
T ss_dssp --------------------------------C-----------------------HHHHHHHHHHTCHHHHHHHTSTTS
T ss_pred ccCchhhhhhhHHHH-HHHhccCCCcccC-chh-----------------------hHHHHHHHHcCCHHHHHHHHHcCC
Confidence 457778877666655 5666999999853 211 123344444556667788889999
Q ss_pred CCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCC-CHH
Q 006616 538 GQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGK-TSL 616 (638)
Q Consensus 538 ~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~-TpL 616 (638)
+++..|..|.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.++..|. |||
T Consensus 62 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l 141 (239)
T 1ycs_B 62 DPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAA 141 (239)
T ss_dssp SCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998887 999
Q ss_pred HHH--HHcCCCcHHHHHHHhhCCC
Q 006616 617 ELA--VESNFADSEVLAILSDSHG 638 (638)
Q Consensus 617 ~~A--~~~g~~d~eiv~lLle~ga 638 (638)
|+| +..|+ .+++++|+++|+
T Consensus 142 ~~a~~~~~g~--~~~~~~Ll~~~a 163 (239)
T 1ycs_B 142 DKCEEMEEGY--TQCSQFLYGVQE 163 (239)
T ss_dssp HHCCSSSTTC--CCHHHHHHHHHH
T ss_pred HHHHHhhhcc--HHHHHHHHHhhh
Confidence 999 67777 679999998763
No 51
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.84 E-value=9.4e-21 Score=186.58 Aligned_cols=121 Identities=21% Similarity=0.207 Sum_probs=102.9
Q ss_pred cccccccCCcccccccccCCC--CCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHH
Q 006616 516 SLTGNSSDRSSSGSLNLAGTS--EGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAM 593 (638)
Q Consensus 516 ~l~~~~~~~~~~~~~lL~~~~--~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~ 593 (638)
+++.+...+...++.+|+..| ++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 75 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 75 PFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp HHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 334444445566677777777 888888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCC-CCCCCccCCCCCHHHHHHHcCCCcHHHHHHHh-hCCC
Q 006616 594 FAKLLLTRG-ADPRAVNREGKTSLELAVESNFADSEVLAILS-DSHG 638 (638)
Q Consensus 594 ~v~lLl~~g-ad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLl-e~ga 638 (638)
++++|+++| ++++.+|..|.||||+|+..|+ .+++++|+ ++|+
T Consensus 155 ~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~--~~~v~~Ll~~~ga 199 (228)
T 2dzn_A 155 LIELLCGLGKSAVNWQDKQGWTPLFHALAEGH--GDAAVLLVEKYGA 199 (228)
T ss_dssp HHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTC--HHHHHHHHHHHCC
T ss_pred HHHHHHhcCcccccCcCCCCCCHHHHHHHcCC--HHHHHHHHHhcCC
Confidence 999999998 9999999999999999999987 88999998 6664
No 52
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.84 E-value=8.3e-21 Score=188.44 Aligned_cols=178 Identities=22% Similarity=0.186 Sum_probs=126.1
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccc-------hhhHHHHHhhhhc----c---ccCCCcccccccccC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCIS-------SLTLAKAMLLNEQ----T---SLERSSSSLTGNSSD 523 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~-------~~~l~~~ll~~~~----~---~~~~~~~~l~~~~~~ 523 (638)
..|+.|+..++.+ ++++|++.|+++|..+..+..+. +..+++.++.... . ......++++.+...
T Consensus 48 t~L~~A~~~~~~~-~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~ 126 (241)
T 1k1a_A 48 TPLHLAVITTLPS-VVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 126 (241)
T ss_dssp CHHHHHHHTTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHH
T ss_pred CHHHHHHHcCCHH-HHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHc
Confidence 5677788777654 56777799999998877663332 3345555554332 1 011223344444455
Q ss_pred CcccccccccCCCCCCCcCC-CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCC
Q 006616 524 RSSSGSLNLAGTSEGQTMDD-LEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRG 602 (638)
Q Consensus 524 ~~~~~~~lL~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~g 602 (638)
+....+.+|+..|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 127 ~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 206 (241)
T 1k1a_A 127 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG 206 (241)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 55667777778888888877 67888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 603 ADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 603 ad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
++++.+|..|.|||++|+..|+ .++++.|++.++
T Consensus 207 a~~~~~~~~g~tpl~~A~~~~~--~~i~~~l~~~~a 240 (241)
T 1k1a_A 207 ADSSLKNCHNDTPLMVARSRRV--IDILRGKATRPA 240 (241)
T ss_dssp CCTTCCCTTSCCTTTTCSSHHH--HHHHTC------
T ss_pred CCCCCcCCCCCCHHHHHHhcCc--HHHHhhhccCCC
Confidence 8888888888888888888877 778888877654
No 53
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.84 E-value=1.7e-21 Score=206.74 Aligned_cols=179 Identities=17% Similarity=0.169 Sum_probs=150.7
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhccccC-CCcccccccccCCcccc
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTSLE-RSSSSLTGNSSDRSSSG 528 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~~~-~~~~~l~~~~~~~~~~~ 528 (638)
...|+.|+..|+.+.| ++|++.|+|+|..+..+..+ .+..++++|+..+..... ...++++.+...+...+
T Consensus 21 ~t~L~~Aa~~g~~~~v-~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~ 99 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEV-RRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDL 99 (364)
T ss_dssp HHHHHHHHHHTCHHHH-HHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHcCCHHHH-HHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHH
Confidence 3578889988887765 55668999999988877443 345677777766543322 34455666666677777
Q ss_pred cccccCC----CCCCCc-----------------CCCCCCcHHHHHHHhC--CHHHHHHHHHcCCCCcccCCCCCcHHHH
Q 006616 529 SLNLAGT----SEGQTM-----------------DDLEGCTLLHLACDSA--DIGMLELLLQYGANINATDSRGLTPLHR 585 (638)
Q Consensus 529 ~~lL~~~----~~~~~~-----------------~d~~G~TpLh~Aa~~g--~~~~v~~Ll~~gadvn~~d~~G~TpLh~ 585 (638)
+.+|+.. +++++. .|..|.||||+|+..| +.++|++|+++|++++.+|..|+||||+
T Consensus 100 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 179 (364)
T 3ljn_A 100 VVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMR 179 (364)
T ss_dssp HHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 7788877 777776 8889999999999999 9999999999999999999999999999
Q ss_pred HHHhCCHHHHHHHHhCCCC-----CCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 586 CILRGKAMFAKLLLTRGAD-----PRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 586 A~~~g~~~~v~lLl~~gad-----~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
|+..|+.++|++|+++|++ ++..|..|.||||+|+..|+ .++|++|+++||
T Consensus 180 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~--~~~v~~Ll~~ga 235 (364)
T 3ljn_A 180 AMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW--EDVAMRFVEMGI 235 (364)
T ss_dssp HHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTC--HHHHHHHHTTTC
T ss_pred HHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCC--HHHHHHHHHcCC
Confidence 9999999999999999999 99999999999999999998 899999999986
No 54
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.84 E-value=8.6e-21 Score=188.48 Aligned_cols=155 Identities=23% Similarity=0.287 Sum_probs=131.8
Q ss_pred cceecccccccchhhhhhhccccc----CccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCccccccccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEV----DVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLA 533 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~ga----DvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~ 533 (638)
..|+.|+..|+...|.. |++.+. ++|..+..+ .++|+.+...+...++.+|+
T Consensus 10 t~L~~A~~~g~~~~v~~-Ll~~~~~~~~~~~~~~~~g-----------------------~t~L~~A~~~~~~~~v~~Ll 65 (236)
T 1ikn_D 10 SFLHLAIIHEEKALTME-VIRQVKGDLAFLNFQNNLQ-----------------------QTPLHLAVITNQPEIAEALL 65 (236)
T ss_dssp CTTHHHHHTTCSSSSSC-CCC-----CCCCCCCCTTC-----------------------CCHHHHHHHTTCHHHHHCCC
T ss_pred chhHHHHHcCChhHHHH-HHHHhhccHHHhhccCCCC-----------------------CCHHHHHHHcCCHHHHHHHH
Confidence 56888998888766544 445554 788777655 23344444556677888899
Q ss_pred CCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCC------CcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCC
Q 006616 534 GTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGAN------INATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRA 607 (638)
Q Consensus 534 ~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad------vn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~ 607 (638)
..|++++..|..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 66 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 145 (236)
T 1ikn_D 66 GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA 145 (236)
T ss_dssp SCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999986 577888999999999999999999999999999999
Q ss_pred ccC-CCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 608 VNR-EGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 608 ~d~-~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
++. .|.||||+|+..|+ .++|++|+++||
T Consensus 146 ~~~~~g~tpL~~A~~~~~--~~~v~~Ll~~ga 175 (236)
T 1ikn_D 146 QEPCNGRTALHLAVDLQN--PDLVSLLLKCGA 175 (236)
T ss_dssp CCTTTCCCHHHHHHHTTC--HHHHHHHHTTTC
T ss_pred CCCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 998 99999999999998 899999999986
No 55
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.84 E-value=2e-21 Score=191.98 Aligned_cols=146 Identities=18% Similarity=0.178 Sum_probs=82.4
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccc-------hhhHHHHHhhhhcccc---CCCcccccccccCCccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCIS-------SLTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSSS 527 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~-------~~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~~ 527 (638)
..|+.|+..++.+ ++++|++.|+|+|..+..+..+. +..+++.++..+.... ....++++.+...+...
T Consensus 75 t~L~~A~~~~~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 153 (231)
T 3aji_A 75 SPLHIAASAGXDE-IVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLK 153 (231)
T ss_dssp CHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred CHHHHHHHcCHHH-HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 3455555555443 44555566666666655442222 2344444443322111 11223333333344455
Q ss_pred ccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCC
Q 006616 528 GSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGAD 604 (638)
Q Consensus 528 ~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad 604 (638)
++.+|+..|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 154 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 154 MVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 55566666666666666667777777766677777777766776666666677777776666666666666666554
No 56
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.83 E-value=1.2e-20 Score=197.55 Aligned_cols=179 Identities=20% Similarity=0.185 Sum_probs=145.1
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhcccc---CCCcccccccccCCcc
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSS 526 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~ 526 (638)
...|+.|+..|+.+ ++++|++.|+|+|..+..+..+ .+..++++|+..+.... ....++++.+...+..
T Consensus 59 ~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 137 (351)
T 3utm_A 59 STPLHLAAGYNRVR-IVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRV 137 (351)
T ss_dssp CCHHHHHHHTTCHH-HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred CCHHHHHHHcCCHH-HHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 35778888877765 5567779999999988776443 34567777776543221 1233455555666677
Q ss_pred cccccccCCCCCCCcCC------------------------------------------------------CCCCcHHHH
Q 006616 527 SGSLNLAGTSEGQTMDD------------------------------------------------------LEGCTLLHL 552 (638)
Q Consensus 527 ~~~~lL~~~~~~~~~~d------------------------------------------------------~~G~TpLh~ 552 (638)
.++.+|+..|++++..+ ..|.||||+
T Consensus 138 ~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~ 217 (351)
T 3utm_A 138 EVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHC 217 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHH
T ss_pred HHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHH
Confidence 78888888898887654 456789999
Q ss_pred HHHh---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHH
Q 006616 553 ACDS---ADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVESNFADSEV 629 (638)
Q Consensus 553 Aa~~---g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~ei 629 (638)
|+.. +..+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .++
T Consensus 218 A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~--~~~ 295 (351)
T 3utm_A 218 AVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGH--LQT 295 (351)
T ss_dssp HHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC--HHH
T ss_pred HHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc--HHH
Confidence 9988 55899999999999999999999999999999999999999999999999999999999999999998 899
Q ss_pred HHHHhhCCC
Q 006616 630 LAILSDSHG 638 (638)
Q Consensus 630 v~lLle~ga 638 (638)
|++|+++||
T Consensus 296 v~~Ll~~ga 304 (351)
T 3utm_A 296 CRLLLSYGS 304 (351)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 999999986
No 57
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.83 E-value=8.2e-21 Score=202.63 Aligned_cols=179 Identities=15% Similarity=0.209 Sum_probs=145.2
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhccc-------hhhHHHHHhhhh--------ccccCCCcccccccc
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCIS-------SLTLAKAMLLNE--------QTSLERSSSSLTGNS 521 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~-------~~~l~~~ll~~~--------~~~~~~~~~~l~~~~ 521 (638)
...|+.|+..++.+ ++++|++.|+|+|..+..+.... +..++++|+... .+..+.+++++++..
T Consensus 167 ~TpL~~A~~~g~~~-iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~ 245 (373)
T 2fo1_E 167 NTPLMLAVLARRRR-LVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHN 245 (373)
T ss_dssp CCHHHHHHHHTCHH-HHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHS
T ss_pred CCHHHHHHHcChHH-HHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHh
Confidence 35788888877765 56777899999999887764333 345666666543 122334444444433
Q ss_pred cC-CcccccccccCCCCCCCc--------CCCCCCcHHHHHHHhCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHhCC
Q 006616 522 SD-RSSSGSLNLAGTSEGQTM--------DDLEGCTLLHLACDSADIGMLELLLQYG-ANINATDSRGLTPLHRCILRGK 591 (638)
Q Consensus 522 ~~-~~~~~~~lL~~~~~~~~~--------~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~ 591 (638)
.+ ....++.+|+..|++++. .|..|.||||+|+..|+.++|++|+++| +++|.+|..|+||||+|+..|+
T Consensus 246 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~ 325 (373)
T 2fo1_E 246 EGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGR 325 (373)
T ss_dssp CSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCC
Confidence 22 156677888899999886 6778999999999999999999999886 9999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 592 AMFAKLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 592 ~~~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
.++|++|+++|++++.+|..|.|||++|+..|+ .+||++|+++++
T Consensus 326 ~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~--~~iv~~Ll~~~a 370 (373)
T 2fo1_E 326 IEVVMYLIQQGASVEAVDATDHTARQLAQANNH--HNIVDIFDRCRP 370 (373)
T ss_dssp HHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTC--HHHHHHHHTTC-
T ss_pred HHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCC--HHHHHHHHhcCc
Confidence 999999999999999999999999999999998 999999999875
No 58
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.83 E-value=5.9e-21 Score=193.15 Aligned_cols=176 Identities=18% Similarity=0.157 Sum_probs=141.0
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccch-------hhHHHHHhhhhcccc---CCCcccccccccCCccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISS-------LTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSSS 527 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~-------~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~~ 527 (638)
..|+.|+..|+.+.| ++|++.|+|+|..+..+..+.+ ..+++.|+..+.... ....++++.+...+...
T Consensus 5 t~L~~A~~~g~~~~v-~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (261)
T 2xai_A 5 SPMHEAAIHGHQLSL-RNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWD 83 (261)
T ss_dssp CHHHHHHHHTCHHHH-HHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred CHHHHHHHcCCHHHH-HHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 457788888877654 5566889999988877644333 355666665432211 12234455555556677
Q ss_pred ccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCC
Q 006616 528 GSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRA 607 (638)
Q Consensus 528 ~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~ 607 (638)
++.+|+..|++++.. .+|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 84 ~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 162 (261)
T 2xai_A 84 CVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ 162 (261)
T ss_dssp HHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 888889999998864 4599999999999999999999999999999999999999999999999999999999999995
Q ss_pred ccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 608 VNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 608 ~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+..|.||||+|+..|+ .+++++|+++||
T Consensus 163 -~~~g~t~Lh~A~~~~~--~~~v~~Ll~~ga 190 (261)
T 2xai_A 163 -GKGQDSPLHAVARTAS--EELACLLMDFGA 190 (261)
T ss_dssp -CBTTBCHHHHHHHHTC--HHHHHHHHHTTC
T ss_pred -CCCCCChHHHHHHcCC--HHHHHHHHHcCC
Confidence 8899999999999998 899999999986
No 59
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.83 E-value=1.9e-20 Score=183.83 Aligned_cols=169 Identities=24% Similarity=0.194 Sum_probs=137.4
Q ss_pred cchhhhhhhcccccCcccc-ccchhc-------cchhhHHHHHhhhhcccc---CCCcccccccccCCcccccccccCCC
Q 006616 468 DKKAVYRHIVNFEVDVNAV-YEQVSC-------ISSLTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSSSGSLNLAGTS 536 (638)
Q Consensus 468 d~~~v~~lLl~~gaDvN~~-~~~~~~-------~~~~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~~~~~lL~~~~ 536 (638)
+..++++.|++.|++++.. +..+.. ..+..+++.++..+.... ....++++.+...+...++.+|+..+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4456678888999999875 444422 334566777776543321 12234555555566666777777776
Q ss_pred C-CCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCH
Q 006616 537 E-GQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTS 615 (638)
Q Consensus 537 ~-~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~Tp 615 (638)
+ +++..+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 161 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP 161 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCH
Confidence 6 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcHHHHHHHhhCCC
Q 006616 616 LELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 616 L~~A~~~g~~d~eiv~lLle~ga 638 (638)
||+|+..|+ .+++++|+++|+
T Consensus 162 L~~A~~~~~--~~~v~~Ll~~ga 182 (223)
T 2f8y_A 162 LFLAAREGS--YETAKVLLDHFA 182 (223)
T ss_dssp HHHHHHHTC--HHHHHHHHHTTC
T ss_pred HHHHHHcCC--HHHHHHHHHcCC
Confidence 999999998 899999999985
No 60
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.83 E-value=5.6e-21 Score=200.45 Aligned_cols=153 Identities=20% Similarity=0.151 Sum_probs=126.6
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCccccccccc--CCcccccccccCC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSS--DRSSSGSLNLAGT 535 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~--~~~~~~~~lL~~~ 535 (638)
..|+.|+..|+.+.|..||.+.|+|||..+..+... ++..+... .....++.+|+..
T Consensus 170 T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~---------------------l~~~~~~~~~~~~~~i~~lLl~~ 228 (337)
T 4g8k_A 170 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA---------------------LIHALLSSDDSDVEAITHLLLDH 228 (337)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCH---------------------HHHHHHHSCTTTHHHHHHHHHHT
T ss_pred cHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcH---------------------HHHHHHHcCcccHHHHHHHHHHC
Confidence 468889988887765444445799999988766222 11111111 1223356678899
Q ss_pred CCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCC
Q 006616 536 SEGQTMDDLEGCTLLHLACDSADIGMLELLLQY-GANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKT 614 (638)
Q Consensus 536 ~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~T 614 (638)
|++++..|..|+||||+|+..|+.+++++|+.. |+++|.+|..|+||||+|+..|+.++|++||++||+++.+ +
T Consensus 229 gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~ 303 (337)
T 4g8k_A 229 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----D 303 (337)
T ss_dssp TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----C
T ss_pred CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----C
Confidence 999999999999999999999999999999985 8999999999999999999999999999999999999764 5
Q ss_pred HHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 615 SLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 615 pL~~A~~~g~~d~eiv~lLle~ga 638 (638)
|||+|+..|+ .+||++|+++||
T Consensus 304 ~L~~A~~~~~--~~iv~~Ll~~GA 325 (337)
T 4g8k_A 304 LVMTARRNYD--HSLVKVLLSHGA 325 (337)
T ss_dssp HHHHHHHTTC--HHHHHHHHHTTC
T ss_pred HHHHHHHcCC--HHHHHHHHHCcC
Confidence 9999999998 899999999997
No 61
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=2.1e-20 Score=189.60 Aligned_cols=178 Identities=20% Similarity=0.177 Sum_probs=145.4
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhcccc-------------CCCcccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTSL-------------ERSSSSL 517 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~~-------------~~~~~~l 517 (638)
..|+.|+..++.+ ++++|++.|+++|..+..+..+ .+..++++++..+.... .....++
T Consensus 74 t~L~~A~~~~~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L 152 (285)
T 1wdy_A 74 TPFLLAAIAGSVK-LLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATAL 152 (285)
T ss_dssp CHHHHHHHHTCHH-HHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHH
T ss_pred CHHHHHHHcCCHH-HHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHH
Confidence 5677888777765 5567779999999888766433 33456666665433221 1123444
Q ss_pred cccccCCcccccccccCC-CCCCCcCCCCCCcHHHHHHHhCC----HHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCH
Q 006616 518 TGNSSDRSSSGSLNLAGT-SEGQTMDDLEGCTLLHLACDSAD----IGMLELLLQYGANINATDSRGLTPLHRCILRGKA 592 (638)
Q Consensus 518 ~~~~~~~~~~~~~lL~~~-~~~~~~~d~~G~TpLh~Aa~~g~----~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~ 592 (638)
+.+...+....+..|+.. |++++..|..|.||||+|+..++ .+++++|+++|+++|.+|..|+||||+|+..|+.
T Consensus 153 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 232 (285)
T 1wdy_A 153 MDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHL 232 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 545455555666666655 99999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHh-CCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 593 MFAKLLLT-RGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 593 ~~v~lLl~-~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+++++|++ .|++++.+|..|.||||+|+..|+ .+++++|+++||
T Consensus 233 ~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~--~~i~~~Ll~~Ga 277 (285)
T 1wdy_A 233 GLVQRLLEQEHIEINDTDSDGKTALLLAVELKL--KKIAELLCKRGA 277 (285)
T ss_dssp HHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHHHSS
T ss_pred HHHHHHHhccCCCccccCCCCCcHHHHHHHcCc--HHHHHHHHHcCC
Confidence 99999999 899999999999999999999998 899999999986
No 62
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.82 E-value=1.2e-20 Score=190.87 Aligned_cols=176 Identities=20% Similarity=0.219 Sum_probs=144.9
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhccc-------hhhHHHHHhhhhcccc--CCCcccccccccCCccc
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCIS-------SLTLAKAMLLNEQTSL--ERSSSSLTGNSSDRSSS 527 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~-------~~~l~~~ll~~~~~~~--~~~~~~l~~~~~~~~~~ 527 (638)
...|+.|+..++.+ ++++|++.|+|+|..+..+..+. +..+++.++..+.... ....++++.+...+...
T Consensus 37 ~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~ 115 (261)
T 2xai_A 37 VSPLHEACLGGHLS-CVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVE 115 (261)
T ss_dssp CCHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHH-HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHH
Confidence 35788888887765 55677799999999887774433 3466666765543321 12344555666667778
Q ss_pred ccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCC
Q 006616 528 GSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRA 607 (638)
Q Consensus 528 ~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~ 607 (638)
++.+|+..|++++..|..|.||||+|+..|+.+++++|+++|+++|. +..|+||||+|+..|+.+++++|+++|++++.
T Consensus 116 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 116 CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQA 194 (261)
T ss_dssp HHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 88899999999999999999999999999999999999999999996 88999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 608 VNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 608 ~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+|.+|.||||+|+..+ +++++|+++++
T Consensus 195 ~d~~g~tpl~~A~~~~----~~~~~ll~~~~ 221 (261)
T 2xai_A 195 KNAEGKRPVELVPPES----PLAQLFLEREG 221 (261)
T ss_dssp CCTTSCCGGGGSCTTC----THHHHHHHC-C
T ss_pred cCCCCCChhhhccccc----cHHHHHHhccC
Confidence 9999999999999665 38999998764
No 63
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.82 E-value=3.6e-20 Score=162.71 Aligned_cols=96 Identities=19% Similarity=0.353 Sum_probs=76.0
Q ss_pred eeEEEEEEeecCCCCCCceeeEEEEecCceEEEEe----cCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCC
Q 006616 99 TIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYR----KQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 174 (638)
Q Consensus 99 ~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~----~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 174 (638)
+.++|||+|+++...|.||||||||.+ ..||||+ ++.+
T Consensus 8 ~~~~G~L~KqG~~~~K~WKrRwFVL~~-~~LyYfk~~~~~~~~------------------------------------- 49 (126)
T 1wi1_A 8 MKHSGYLWAIGKNVWKRWKKRFFVLVQ-VSQYTFAMCSYREKK------------------------------------- 49 (126)
T ss_dssp EEEEEEEEEECSSSCCSCEEEEEEEEE-EETTEEEEEECCSSS-------------------------------------
T ss_pred CceeEEEEEeCCCcccccceEEEEEeC-CEEEEEEcccccccC-------------------------------------
Confidence 579999999977667899999999994 5677776 3321
Q ss_pred ccccccceeecccceeec---CCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 175 EKSAARHTVNLLTSTIKV---DADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 175 ~~~~~~~~i~l~~~~v~~---~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
..+.+.|.|..++|.. .++...++|+|+|+.++++|+|+|+|++||++||+||..++.
T Consensus 50 --~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 50 --AEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATG 110 (126)
T ss_dssp --SCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred --CCCceEEECCCcEEEEecCCcccccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHhc
Confidence 1233457788888773 333356889999999999999999999999999999999874
No 64
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.82 E-value=2.2e-20 Score=191.77 Aligned_cols=176 Identities=18% Similarity=0.173 Sum_probs=142.8
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhcccc---CCCcccccccccCCccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSSS 527 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~~ 527 (638)
..|+.|+..|+.+.| ++|++.|+|+|..+..+..+ .+..+++.|+..+.... ....++++.+...+...
T Consensus 61 t~L~~Aa~~g~~~~v-~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~ 139 (285)
T 3d9h_A 61 SPMHEAAIHGHQLSL-RNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWD 139 (285)
T ss_dssp CHHHHHHHTTCHHHH-HHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred CHHHHHHHcCCHHHH-HHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHH
Confidence 568888888887654 56668999999988777443 33466666665432211 12234455555556677
Q ss_pred ccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCC
Q 006616 528 GSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRA 607 (638)
Q Consensus 528 ~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~ 607 (638)
++.+|+..|++++..+ .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 140 ~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 218 (285)
T 3d9h_A 140 CVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ 218 (285)
T ss_dssp HHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC
Confidence 7888889999988655 499999999999999999999999999999999999999999999999999999999999995
Q ss_pred ccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 608 VNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 608 ~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
|..|.||||+|+..|+ .+++++|+++|+
T Consensus 219 -~~~g~t~L~~A~~~~~--~~~v~~Ll~~ga 246 (285)
T 3d9h_A 219 -GKGQDSPLHAVVRTAS--EELACLLMDFGA 246 (285)
T ss_dssp -CBTTBCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred -CCCCCCHHHHHHHcCC--HHHHHHHHHCCC
Confidence 8899999999999998 899999999886
No 65
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.82 E-value=4.1e-20 Score=200.86 Aligned_cols=178 Identities=17% Similarity=0.244 Sum_probs=138.2
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhcccc---CCCcccccccccCCccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSSS 527 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~~ 527 (638)
..|+.|+..++.+ ++++|++.|++++..+..+..+ .+..+++.|+..+.... ....++++.+...+...
T Consensus 181 t~L~~A~~~~~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 259 (437)
T 1n11_A 181 TPLHVAVHHNNLD-IVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAE 259 (437)
T ss_dssp CHHHHHHHTTCHH-HHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHH-HHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence 4677777777654 5567778899888776555332 33456666665432211 12234455555566677
Q ss_pred ccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCC
Q 006616 528 GSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRA 607 (638)
Q Consensus 528 ~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~ 607 (638)
++.+|+..+++++..|..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 260 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~ 339 (437)
T 1n11_A 260 MVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA 339 (437)
T ss_dssp HHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTC
T ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCC
Confidence 77888888999999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 608 VNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 608 ~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+|..|.||||+|+..|+ .++|++|+++||
T Consensus 340 ~~~~g~t~L~~A~~~g~--~~iv~~Ll~~ga 368 (437)
T 1n11_A 340 KTKLGYSPLHQAAQQGH--TDIVTLLLKNGA 368 (437)
T ss_dssp CCTTSCCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHCCh--HHHHHHHHHCcC
Confidence 99999999999999987 889999998875
No 66
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.82 E-value=9.5e-21 Score=192.46 Aligned_cols=155 Identities=25% Similarity=0.315 Sum_probs=132.1
Q ss_pred cceecccccccchhhhhhhcccccC---ccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVD---VNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAG 534 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaD---vN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~ 534 (638)
..|+.|+..|+... +++|++.|++ +|..+..+ .+ +|+.+...+...++.+|+.
T Consensus 11 t~L~~A~~~g~~~~-v~~Ll~~g~~~~~~~~~~~~g---------------------~t--~L~~A~~~g~~~~v~~Ll~ 66 (282)
T 1oy3_D 11 TALHLAVIHQHEPF-LDFLLGFSAGHEYLDLQNDLG---------------------QT--ALHLAAILGEASTVEKLYA 66 (282)
T ss_dssp CHHHHHHHTTCHHH-HHHHHHHHTTSGGGGCCCTTS---------------------CC--HHHHHHHHTCHHHHHHHHH
T ss_pred cHHHHHHHcCCHHH-HHHHHhcCCCcccccccCCCC---------------------CC--HHHHHHHcCCHHHHHHHHH
Confidence 56888888887664 5667788998 56555544 23 3344444556677888899
Q ss_pred CCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCC-------------------------------------------
Q 006616 535 TSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGAN------------------------------------------- 571 (638)
Q Consensus 535 ~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad------------------------------------------- 571 (638)
.|++++..|..|.||||+|+..|+.+++++|+++|++
T Consensus 67 ~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (282)
T 1oy3_D 67 AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDED 146 (282)
T ss_dssp TTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCC
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhh
Confidence 9999999999999999999999999999999998865
Q ss_pred ----CcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCC-CCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 572 ----INATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNRE-GKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 572 ----vn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~-g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+ .++|++|+++|+
T Consensus 147 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~--~~~v~~Ll~~ga 216 (282)
T 1oy3_D 147 WRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQA--ASVLELLLKAGA 216 (282)
T ss_dssp GGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred hhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 7788999999999999999999999999999999999865 9999999999998 899999999986
No 67
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=8.8e-20 Score=160.84 Aligned_cols=102 Identities=27% Similarity=0.482 Sum_probs=82.8
Q ss_pred CCCcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCC
Q 006616 94 KGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 173 (638)
Q Consensus 94 ~~~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 173 (638)
+....++++|||+|++...++.|+||||||+ ++.|+||++....+
T Consensus 5 ~~~~~~~~~G~L~K~~~~~~k~WkkR~fvL~-~~~L~yyk~~~~~~---------------------------------- 49 (114)
T 2da0_A 5 SSGYGSEKKGYLLKKSDGIRKVWQRRKCSVK-NGILTISHATSNRQ---------------------------------- 49 (114)
T ss_dssp CCCCCSCEEEEEEEECSSSCCCEEEEEEEEE-TTEEEECCSSCCSC----------------------------------
T ss_pred CCCCCccEEEEEEEeCCCCCCCceeEEEEEe-CCEEEEEcCCCCCC----------------------------------
Confidence 3445678999999997655589999999997 77888887754321
Q ss_pred CccccccceeecccceeecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006616 174 DEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSS 239 (638)
Q Consensus 174 ~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~~ 239 (638)
...+.+..|.|++. .+++|||+|+++.++|+|+|+|++|+++||.+|+.+|..+++.
T Consensus 50 ------~~~i~l~~~~v~~~---~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 106 (114)
T 2da0_A 50 ------PAKLNLLTCQVKPN---AEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALTM 106 (114)
T ss_dssp ------CEEEETTTSEEEEC---SSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHTT
T ss_pred ------CCEEEeeeeEEEEC---CCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 23366777777743 2468999999999999999999999999999999999998876
No 68
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.82 E-value=3.6e-21 Score=191.30 Aligned_cols=143 Identities=21% Similarity=0.251 Sum_probs=116.3
Q ss_pred hhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCCCCCCcCCCCCCcHHHHH
Q 006616 474 RHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLA 553 (638)
Q Consensus 474 ~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~A 553 (638)
+.|++.|++++..+..+.. ..+.|+.+...+....+..|+..|++++..|..|+||||+|
T Consensus 2 ~~ll~~~~~~~~~~~~~~~--------------------~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A 61 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLN--------------------PLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNA 61 (229)
T ss_dssp --------CCCCCCCTTSC--------------------HHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHH
T ss_pred eehhccCCCCccccccccc--------------------hhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 4566889999876654411 11223444445566677778889999999999999999999
Q ss_pred HHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCcc-CCCCCHHHHH--HHcCCCcHHHH
Q 006616 554 CDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVN-REGKTSLELA--VESNFADSEVL 630 (638)
Q Consensus 554 a~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d-~~g~TpL~~A--~~~g~~d~eiv 630 (638)
|..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+| +..|+ .+++
T Consensus 62 ~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~--~~~v 139 (229)
T 2vge_A 62 ICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGY--ADCA 139 (229)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTH--HHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcCh--HHHH
Confidence 99999999999999999999999999999999999999999999999999999997 6999999999 88876 8999
Q ss_pred HHHhhCCC
Q 006616 631 AILSDSHG 638 (638)
Q Consensus 631 ~lLle~ga 638 (638)
++|+++|+
T Consensus 140 ~~Ll~~ga 147 (229)
T 2vge_A 140 TYLADVEQ 147 (229)
T ss_dssp HHHHHHHH
T ss_pred HHHHHcCC
Confidence 99998764
No 69
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.81 E-value=4.5e-20 Score=163.71 Aligned_cols=118 Identities=32% Similarity=0.437 Sum_probs=109.3
Q ss_pred ccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHH
Q 006616 519 GNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLL 598 (638)
Q Consensus 519 ~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lL 598 (638)
.+...+....+..|+..+++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 8 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 87 (126)
T 1n0r_A 8 LAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 87 (126)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHH
Confidence 33344455666777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 599 LTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 599 l~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+++|++++.+|..|.|||++|+..|+ .+++++|+++||
T Consensus 88 l~~g~~~~~~~~~g~t~l~~A~~~~~--~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 88 LEAGADVNAKDKNGRTPLHLAARNGH--LEVVKLLLEAGA 125 (126)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHHHTC
T ss_pred HHcCCCCcccCCCCCCHHHHHHHcCc--HHHHHHHHHcCC
Confidence 99999999999999999999999998 999999999997
No 70
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.81 E-value=1.3e-20 Score=175.22 Aligned_cols=120 Identities=22% Similarity=0.218 Sum_probs=109.8
Q ss_pred cccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCc-HHHHHHHhCCHHH
Q 006616 516 SLTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLT-PLHRCILRGKAMF 594 (638)
Q Consensus 516 ~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~T-pLh~A~~~g~~~~ 594 (638)
.|+.+...+....+..|+..|++++..|..|+||||+|+ .|+.+++++|+++|+++|.+|..|+| |||+|+..|+.++
T Consensus 15 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~ 93 (156)
T 1bi7_B 15 WLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDT 93 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHH
Confidence 444455556667778888899999999999999999985 99999999999999999999999999 9999999999999
Q ss_pred HHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 595 AKLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 595 v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+++|+++|++++.+|..|.||||+|+..|+ .+++++|+++||
T Consensus 94 v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~--~~~v~~Ll~~ga 135 (156)
T 1bi7_B 94 LVVLHRAGARLDVRDAWGRLPVDLAEELGH--RDVARYLRAAAG 135 (156)
T ss_dssp HHHHHHHTCCSSCCCTTCCCHHHHHHHHTC--HHHHHHHSSCC-
T ss_pred HHHHHHcCCCCcccCCCCCCHHHHHHHhCH--HHHHHHHHHcCC
Confidence 999999999999999999999999999998 899999999986
No 71
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.81 E-value=4.9e-20 Score=189.13 Aligned_cols=174 Identities=20% Similarity=0.215 Sum_probs=143.4
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhccc-------hhhHHHHHhhhhccc--cCCCcccccccccCCccc
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCIS-------SLTLAKAMLLNEQTS--LERSSSSLTGNSSDRSSS 527 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~-------~~~l~~~ll~~~~~~--~~~~~~~l~~~~~~~~~~ 527 (638)
...|+.|+..++.+ ++++|++.|+|+|..+..+..+. +..+++.|+..+... .....++++.+...+...
T Consensus 93 ~t~L~~A~~~g~~~-~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~ 171 (285)
T 3d9h_A 93 VSPLHEACLGGHLS-CVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVE 171 (285)
T ss_dssp CCHHHHHHHTTCHH-HHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHH
T ss_pred CCHHHHHHHCCcHH-HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 35788888887765 55677799999999887764433 345666666543321 112344555556666777
Q ss_pred ccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCC
Q 006616 528 GSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRA 607 (638)
Q Consensus 528 ~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~ 607 (638)
++.+|+..|++++..|..|.||||+|+..|+.+++++|+++|++++. |..|+||||+|+..|+.+++++|+++|++++.
T Consensus 172 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 250 (285)
T 3d9h_A 172 CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQA 250 (285)
T ss_dssp HHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 88889999999999999999999999999999999999999999995 88999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHcCCCcHHHHHHHhhC
Q 006616 608 VNREGKTSLELAVESNFADSEVLAILSDS 636 (638)
Q Consensus 608 ~d~~g~TpL~~A~~~g~~d~eiv~lLle~ 636 (638)
+|.+|.|||++|+.. .+++++|+++
T Consensus 251 ~d~~g~t~l~~A~~~----~~~~~~Ll~~ 275 (285)
T 3d9h_A 251 KNAEGKRPVELVPPE----SPLAQLFLER 275 (285)
T ss_dssp CCTTSCCGGGGSCTT----SHHHHHHHHH
T ss_pred cCCCCCCHHHHhcCc----cHHHHHHHHh
Confidence 999999999999943 4799999987
No 72
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.81 E-value=6.1e-20 Score=192.50 Aligned_cols=120 Identities=25% Similarity=0.266 Sum_probs=101.5
Q ss_pred ccccccCCccccccccc-CCCCCCCcCCCCCCcHHHHHHHhCC----HHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCC
Q 006616 517 LTGNSSDRSSSGSLNLA-GTSEGQTMDDLEGCTLLHLACDSAD----IGMLELLLQYGANINATDSRGLTPLHRCILRGK 591 (638)
Q Consensus 517 l~~~~~~~~~~~~~lL~-~~~~~~~~~d~~G~TpLh~Aa~~g~----~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~ 591 (638)
|+.+...+...++.+|+ ..|++++..|..|.|+||+++..+. ..++++|+++|+++|.+|..|+||||+|+..|+
T Consensus 172 L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~ 251 (337)
T 4g8k_A 172 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKH 251 (337)
T ss_dssp HHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTC
T ss_pred HHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhh
Confidence 33344444445555555 5788899888889999988776554 457888999999999999999999999999999
Q ss_pred HHHHHHHHhC-CCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 592 AMFAKLLLTR-GADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 592 ~~~v~lLl~~-gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
.+++++|+.. |++++.+|.+|.||||+|+..|+ .++|++|+++||
T Consensus 252 ~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~--~~iv~~Ll~~GA 297 (337)
T 4g8k_A 252 LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL--KKIAELLCKRGA 297 (337)
T ss_dssp HHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTC--HHHHHHHHTTSC
T ss_pred hHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCC--HHHHHHHHHCCC
Confidence 9999999985 89999999999999999999998 899999999996
No 73
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.81 E-value=7.9e-20 Score=171.41 Aligned_cols=123 Identities=24% Similarity=0.229 Sum_probs=113.4
Q ss_pred cccccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHH
Q 006616 514 SSSLTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAM 593 (638)
Q Consensus 514 ~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~ 593 (638)
.++++.+...+....+..|+..+++++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTD 83 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 34455555666677777888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 594 FAKLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 594 ~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
++++|+++|++++.+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 84 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~ 126 (167)
T 3v31_A 84 IVKMLLDCGVDVNEYDWNGGTPLLYAVHGNH--VKCVKMLLESGA 126 (167)
T ss_dssp HHHHHHHHTCCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred HHHHHHHCCCCCCcCCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 9999999999999999999999999999998 899999999885
No 74
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.81 E-value=9.2e-20 Score=180.86 Aligned_cols=179 Identities=19% Similarity=0.242 Sum_probs=147.2
Q ss_pred cceecccccccchhhhhhhc---ccccCccccccchhcc-------chhhHHHHHhhhhcccc---CCCcccccccccCC
Q 006616 458 HQIWEGVRTNDKKAVYRHIV---NFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTSL---ERSSSSLTGNSSDR 524 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl---~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~ 524 (638)
..|+.|+..|+.+.|..+|. ..|+++|..+..+..+ .+..++++|+..+.... ....++++.+...+
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 90 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHR 90 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 57888999998876655442 4899999988776443 33466667765443211 12234455555566
Q ss_pred cccccccccCCCC----CCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHhCCHHHHHHHH
Q 006616 525 SSSGSLNLAGTSE----GQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATD-SRGLTPLHRCILRGKAMFAKLLL 599 (638)
Q Consensus 525 ~~~~~~lL~~~~~----~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d-~~G~TpLh~A~~~g~~~~v~lLl 599 (638)
....+..|+..++ +++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+
T Consensus 91 ~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 170 (241)
T 1k1a_A 91 SPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLL 170 (241)
T ss_dssp CHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHH
Confidence 6667777777776 889999999999999999999999999999999999999 78999999999999999999999
Q ss_pred hCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 600 TRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 600 ~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
++|++++.+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 171 ~~g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~ga 207 (241)
T 1k1a_A 171 QHGANVNAQMYSGSSALHSASGRGL--LPLVRTLVRSGA 207 (241)
T ss_dssp HTTCCTTCBCTTSCBHHHHHHHHTC--HHHHHHHHHTTC
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCC--HHHHHHHHhcCC
Confidence 9999999999999999999999998 899999999986
No 75
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.80 E-value=8.8e-20 Score=180.84 Aligned_cols=178 Identities=18% Similarity=0.220 Sum_probs=149.6
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhccc---cCCCcccccccccCCccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTS---LERSSSSLTGNSSDRSSS 527 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~---~~~~~~~l~~~~~~~~~~ 527 (638)
..|+.|+..|+.+ ++++|++.|+++|..+..+..+ .+..++++++..+... .....++++.+...+...
T Consensus 13 t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 91 (237)
T 3b7b_A 13 SPLHAAAEAGHVD-ICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYE 91 (237)
T ss_dssp CHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCcHH-HHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 5688898888876 4567779999999987766333 3446677776654321 112344555555666677
Q ss_pred ccccccCCC-CCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC
Q 006616 528 GSLNLAGTS-EGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPR 606 (638)
Q Consensus 528 ~~~lL~~~~-~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~ 606 (638)
++.+|+..+ .+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 92 ~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 171 (237)
T 3b7b_A 92 VVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLH 171 (237)
T ss_dssp HHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT
T ss_pred HHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 777888877 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 607 AVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 607 ~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
.+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 172 ~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~ga 201 (237)
T 3b7b_A 172 AVNIHGDSPLHIAARENR--YDCVVLFLSRDS 201 (237)
T ss_dssp CCCTTCCCHHHHHHHTTC--HHHHHHHHTTTC
T ss_pred CcCCCCCCHHHHHHHhCC--HhHHHHHHHcCC
Confidence 999999999999999998 899999999985
No 76
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.80 E-value=2.9e-20 Score=190.89 Aligned_cols=177 Identities=14% Similarity=0.089 Sum_probs=136.5
Q ss_pred cceecccccccchhhhhhhcccccCccccccch-----hccchhhHHHHHhhhhcccc---CCCcccccccccCCccccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQV-----SCISSLTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSSSGS 529 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~-----~~~~~~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~~~~ 529 (638)
..|+.|+..|+.+.| ++|++.|+|+|..++.. ....+..++++|+..+.... ....++++.+...+...++
T Consensus 33 t~L~~A~~~g~~~~v-~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v 111 (285)
T 3kea_A 33 SASYYAIADNNVRLV-CTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTV 111 (285)
T ss_dssp CHHHHHHHTTCHHHH-HHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CHHHHHHHcCCHHHH-HHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 578888888877654 66678999999886433 22344566777766443211 1223445555556667777
Q ss_pred ccccCCCCCCCcCCCCC-CcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCc
Q 006616 530 LNLAGTSEGQTMDDLEG-CTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAV 608 (638)
Q Consensus 530 ~lL~~~~~~~~~~d~~G-~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~ 608 (638)
.+|+..|++++..|..| .||||+|+..|+.+++++|+++|+++... ..|+||||+|+..|+.+++++|+++|++++.+
T Consensus 112 ~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~ 190 (285)
T 3kea_A 112 KLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTN 190 (285)
T ss_dssp HHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTT
T ss_pred HHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcc
Confidence 78888888888888888 79999999999999999999888877332 27889999999999999999999999999999
Q ss_pred cCCCCCH-HHHHHHcCCCcHHHHHHHhhCCC
Q 006616 609 NREGKTS-LELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 609 d~~g~Tp-L~~A~~~g~~d~eiv~lLle~ga 638 (638)
|..|.|| ||+|+..|+ .+++++|+++||
T Consensus 191 ~~~g~t~~L~~A~~~~~--~~~v~~Ll~~ga 219 (285)
T 3kea_A 191 NSLLFIPDIKLAIDNKD--IEMLQALFKYDI 219 (285)
T ss_dssp CCCBCCTTHHHHHHHTC--HHHHHHHTTSCB
T ss_pred cCCCCChHHHHHHHcCC--HHHHHHHHHcCC
Confidence 9999997 999999988 889999999885
No 77
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.80 E-value=8.7e-20 Score=175.36 Aligned_cols=120 Identities=29% Similarity=0.329 Sum_probs=110.3
Q ss_pred ccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHH
Q 006616 517 LTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAK 596 (638)
Q Consensus 517 l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~ 596 (638)
++.+...+....+..|+..+++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 39 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 118 (192)
T 2rfm_A 39 LMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSY 118 (192)
T ss_dssp HHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Confidence 33344445566677788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 597 LLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 597 lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+|+++|++++.+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 119 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~ga 158 (192)
T 2rfm_A 119 FLLEHGANVNDRNLEGETPLIVASKYGR--SEIVKKLLELGA 158 (192)
T ss_dssp HHHHTTCCSSCCCTTCCCHHHHHHHHTC--HHHHHHHHHTTC
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHcCC--HHHHHHHHHCCC
Confidence 9999999999999999999999999998 899999999885
No 78
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.80 E-value=1.2e-19 Score=170.99 Aligned_cols=121 Identities=31% Similarity=0.422 Sum_probs=112.4
Q ss_pred cccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHH
Q 006616 516 SLTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFA 595 (638)
Q Consensus 516 ~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v 595 (638)
.+..+...+....+..|+..|++++..|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++
T Consensus 17 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 96 (169)
T 2y1l_E 17 KLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIV 96 (169)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred hHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 34455555666777888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 596 KLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 596 ~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
++|+++|++++.+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 97 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~ 137 (169)
T 2y1l_E 97 EVLLKNGADVNANDMEGHTPLHLAAMFGH--LEIVEVLLKNGA 137 (169)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 99999999999999999999999999998 899999999885
No 79
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.80 E-value=8.4e-21 Score=172.25 Aligned_cols=119 Identities=28% Similarity=0.353 Sum_probs=99.8
Q ss_pred ccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHH
Q 006616 517 LTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAK 596 (638)
Q Consensus 517 l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~ 596 (638)
++.+...+....+..|+..|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 14 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 93 (137)
T 3c5r_A 14 LHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVK 93 (137)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 33333344556677788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCC
Q 006616 597 LLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSH 637 (638)
Q Consensus 597 lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~g 637 (638)
+|+++|++++.+|..|.|||++|+..++ .+++++|.+.+
T Consensus 94 ~Ll~~ga~~~~~~~~g~tpl~~A~~~~~--~~~l~~l~~~~ 132 (137)
T 3c5r_A 94 LLLSYGASRNAVNIFGLRPVDYTDDESM--KSLLLLPEKNE 132 (137)
T ss_dssp HHHHTTCCTTCCCTTSCCGGGGCCCHHH--HHHHSCC----
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHhhccH--HHHHhhccccc
Confidence 9999999999999999999999988776 67777776543
No 80
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=153.56 Aligned_cols=92 Identities=25% Similarity=0.374 Sum_probs=73.5
Q ss_pred eeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcccc
Q 006616 99 TIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSA 178 (638)
Q Consensus 99 ~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (638)
+.|+|||+|++ +..++|+||||||+ ++.|+||..+.+ ....
T Consensus 1 V~k~G~L~K~g-~~~k~WkkR~FvL~-~~~L~Yy~~~~~-------------------------------------~~~~ 41 (94)
T 2rsg_A 1 VERCGVLSKWT-NYIHGWQDRWVVLK-NNALSYYKSEDE-------------------------------------TEYG 41 (94)
T ss_dssp CCEEEEEEEES-SSTTCEEEEEEEEE-TTEEEEESSTTG-------------------------------------GGTC
T ss_pred CCEEEEEEEeC-CCCCCceEEEEEEE-CCEEEEEEeccc-------------------------------------cccc
Confidence 36899999994 56789999999998 677888876532 1122
Q ss_pred ccceeecccceeecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHH
Q 006616 179 ARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGV 232 (638)
Q Consensus 179 ~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~ 232 (638)
+.+.++|..|.+.... ..++||.|.+++++|+|+|+|++|+++||+||+++
T Consensus 42 ~~~~i~l~~~~~~~~~---~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 42 CRGSICLSKAVITPHD---FDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp CSEEEETTTCEEEECS---SCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHH
T ss_pred ceeeEecceeeeecCc---ccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhh
Confidence 3456778877776532 44799999999999999999999999999999976
No 81
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.80 E-value=7.2e-20 Score=195.31 Aligned_cols=180 Identities=17% Similarity=0.179 Sum_probs=148.1
Q ss_pred ccceecccccccchhhhhhh-------cccccCccccccchhccch-------hhHHHHHhhhhcccc---CCCcccccc
Q 006616 457 AHQIWEGVRTNDKKAVYRHI-------VNFEVDVNAVYEQVSCISS-------LTLAKAMLLNEQTSL---ERSSSSLTG 519 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lL-------l~~gaDvN~~~~~~~~~~~-------~~l~~~ll~~~~~~~---~~~~~~l~~ 519 (638)
...|+.|+..++.+.|..+| ++.|+|+|..+..+.++.+ ..++++|+..+.+.. ....++++.
T Consensus 126 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~ 205 (373)
T 2fo1_E 126 RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQ 205 (373)
T ss_dssp CCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHH
Confidence 36788899988877665443 4899999999887744433 466777776543321 123345555
Q ss_pred cccCCcccccccccCCC---CCCCcCCCCCCcHHHHHHHhC---CHHHHHHHHHcCCCCcc--------cCCCCCcHHHH
Q 006616 520 NSSDRSSSGSLNLAGTS---EGQTMDDLEGCTLLHLACDSA---DIGMLELLLQYGANINA--------TDSRGLTPLHR 585 (638)
Q Consensus 520 ~~~~~~~~~~~lL~~~~---~~~~~~d~~G~TpLh~Aa~~g---~~~~v~~Ll~~gadvn~--------~d~~G~TpLh~ 585 (638)
+...+...++.+|+..+ ++++..|..|.||||+|+..+ +.+++++|+++|++++. .|..|+||||+
T Consensus 206 A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~ 285 (373)
T 2fo1_E 206 AAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHY 285 (373)
T ss_dssp HHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHH
T ss_pred HHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHH
Confidence 66666777788888887 899999999999999999998 89999999999999986 67799999999
Q ss_pred HHHhCCHHHHHHHHhCC-CCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 586 CILRGKAMFAKLLLTRG-ADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 586 A~~~g~~~~v~lLl~~g-ad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
|+..|+.++|++|+++| ++++.+|..|.||||+|+..|+ .++|++|+++||
T Consensus 286 A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~--~~iv~~Ll~~ga 337 (373)
T 2fo1_E 286 AAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGR--IEVVMYLIQQGA 337 (373)
T ss_dssp HHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTC--HHHHHHHHHTTC
T ss_pred HHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 99999999999999875 9999999999999999999998 999999999986
No 82
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.80 E-value=4.5e-20 Score=189.42 Aligned_cols=172 Identities=12% Similarity=0.080 Sum_probs=140.4
Q ss_pred cccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhcccc-CCCcccccccccCCccccccccc
Q 006616 462 EGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTSL-ERSSSSLTGNSSDRSSSGSLNLA 533 (638)
Q Consensus 462 ~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~~-~~~~~~l~~~~~~~~~~~~~lL~ 533 (638)
.++...+...|.++|... ++|..+..+..+ .+..+++.|+..+.... ....++++.+...+...++.+|+
T Consensus 5 s~i~~~~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 82 (285)
T 3kea_A 5 SRINTWKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILL 82 (285)
T ss_dssp TTGGGCCHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 467788899999999765 677777776443 34466677766543321 12345566666667777888899
Q ss_pred CCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCC-CcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCC
Q 006616 534 GTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRG-LTPLHRCILRGKAMFAKLLLTRGADPRAVNREG 612 (638)
Q Consensus 534 ~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G-~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g 612 (638)
..|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..| .||||+|+..|+.+++++|+++|+++... ..|
T Consensus 83 ~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g 161 (285)
T 3kea_A 83 FSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AIL 161 (285)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STH
T ss_pred HCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCC
Confidence 9999999999999999999999999999999999999999999999 79999999999999999999999887332 289
Q ss_pred CCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 613 KTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 613 ~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
.||||+|+..|+ .+++++|+++|+
T Consensus 162 ~t~L~~A~~~g~--~~~v~~Ll~~ga 185 (285)
T 3kea_A 162 LSCIHITIKNGH--VDMMILLLDYMT 185 (285)
T ss_dssp HHHHHHHHHTTC--HHHHHHHHHHHH
T ss_pred ccHHHHHHHcCh--HHHHHHHHHcCC
Confidence 999999999998 899999998764
No 83
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.79 E-value=2.4e-20 Score=195.46 Aligned_cols=150 Identities=23% Similarity=0.167 Sum_probs=93.0
Q ss_pred cccccchhhhhhhcccccCccc-cccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCCCCCCcC
Q 006616 464 VRTNDKKAVYRHIVNFEVDVNA-VYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTSEGQTMD 542 (638)
Q Consensus 464 v~~~d~~~v~~lLl~~gaDvN~-~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~~~~~~ 542 (638)
+..+....++++|++.|+|||. .+..+ .++|+.+...+...++.+|+..|++++..
T Consensus 104 a~~~~~~~~~~~l~~~g~dvn~~~d~~g-----------------------~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~ 160 (327)
T 1sw6_A 104 SFDSLLQEVNDAFPNTQLNLNIPVDEHG-----------------------NTPLHWLTSIANLELVKHLVKHGSNRLYG 160 (327)
T ss_dssp CHHHHHHHHHHHCTTSCCCSCSCCSTTC-----------------------CCHHHHHHHTTCHHHHHHHHHTTCCTTBC
T ss_pred HHHhhHHHHHHHHHhcCCCcccccCCCC-----------------------CcHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 3344455666666677777776 45444 22233333334455556666666666666
Q ss_pred CCCCCcHHHHHHHhCC---HHHHHHHHHcC-CCCcccCCCCCcHHHHHHH----hCCHHHHHHHHhCCC-----------
Q 006616 543 DLEGCTLLHLACDSAD---IGMLELLLQYG-ANINATDSRGLTPLHRCIL----RGKAMFAKLLLTRGA----------- 603 (638)
Q Consensus 543 d~~G~TpLh~Aa~~g~---~~~v~~Ll~~g-advn~~d~~G~TpLh~A~~----~g~~~~v~lLl~~ga----------- 603 (638)
|..|+||||+|+..|+ .++++.|++++ ++++.+|..|+||||+|+. .|+.+++++|++.++
T Consensus 161 d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i 240 (327)
T 1sw6_A 161 DNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPI 240 (327)
T ss_dssp CTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCE
T ss_pred CCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHH
Confidence 6666666666666666 45556666654 5566666666666666666 666666666665532
Q ss_pred ----------------------------------CCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 604 ----------------------------------DPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 604 ----------------------------------d~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+++.+|..|.||||+|+..|+ .++|++|+++||
T Consensus 241 ~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~--~~~v~~Ll~~Ga 307 (327)
T 1sw6_A 241 QSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGN--ISIVDALLDYGA 307 (327)
T ss_dssp EEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCC--HHHHHHHHHTTC
T ss_pred HhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 466667777777777777776 677777777765
No 84
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.79 E-value=1.9e-19 Score=177.93 Aligned_cols=178 Identities=19% Similarity=0.201 Sum_probs=139.9
Q ss_pred cceecccccccchhhhhhhcccccCccccccc-h-------hccchhhHHHHHhhhhcccc---CCCcccccccccCCcc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQ-V-------SCISSLTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSS 526 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~-~-------~~~~~~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~ 526 (638)
..|+.|+..++.+ ++++|++.|++++..... + ....+..+++.++..+.... .....+++.+...+..
T Consensus 44 t~L~~A~~~~~~~-~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 122 (240)
T 3eu9_A 44 TLLHWAAINNRID-LVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHT 122 (240)
T ss_dssp CHHHHHHHTTCHH-HHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHhCCHH-HHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHH
Confidence 4677777777665 556777889988865543 2 22233466666665432211 1233455555566667
Q ss_pred cccccccCCCCCCCcCCCCCCcHHHHHHHhCC-HHHHHHHHHcCCCCcccCC-CCCcHHHHHHHhCCHHHHHHHHhCCCC
Q 006616 527 SGSLNLAGTSEGQTMDDLEGCTLLHLACDSAD-IGMLELLLQYGANINATDS-RGLTPLHRCILRGKAMFAKLLLTRGAD 604 (638)
Q Consensus 527 ~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~-~~~v~~Ll~~gadvn~~d~-~G~TpLh~A~~~g~~~~v~lLl~~gad 604 (638)
.++..|+..|++++..|..|.||||+|+..++ .+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++
T Consensus 123 ~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 202 (240)
T 3eu9_A 123 SIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN 202 (240)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 78888888999999999999999999997766 7899999999999999887 899999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 605 PRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 605 ~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
++.+|..|.|||++|+..|+ .+++++|+++++
T Consensus 203 ~~~~~~~g~t~l~~A~~~~~--~~~v~~L~~~~~ 234 (240)
T 3eu9_A 203 VDAQNIKGESALDLAKQRKN--VWMINHLQEARQ 234 (240)
T ss_dssp TTCBCTTSCBHHHHHHHTTC--HHHHHHHHHHC-
T ss_pred CCCcCCCCCCHHHHHHHcCc--HHHHHHHHHhhh
Confidence 99999999999999999998 899999999874
No 85
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=2.7e-19 Score=181.41 Aligned_cols=154 Identities=26% Similarity=0.306 Sum_probs=133.6
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCCC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTSE 537 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~~ 537 (638)
..|+.|+..|+.+.| +.|++.|+++|...... ..++++.+...+...++.+|+..|+
T Consensus 7 ~~L~~A~~~g~~~~v-~~Ll~~g~~~~~~~~~~----------------------g~t~L~~A~~~g~~~~v~~Ll~~g~ 63 (285)
T 1wdy_A 7 HLLIKAVQNEDVDLV-QQLLEGGANVNFQEEEG----------------------GWTPLHNAVQMSREDIVELLLRHGA 63 (285)
T ss_dssp HHHHHHHHTTCHHHH-HHHHHTTCCTTCCCTTT----------------------CCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred hHHHHHHHcCCHHHH-HHHHHcCCCcccccCCC----------------------CCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 467889999988765 55668999998773222 1234445555566778888899999
Q ss_pred CCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCc---------
Q 006616 538 GQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAV--------- 608 (638)
Q Consensus 538 ~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~--------- 608 (638)
+++..|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 64 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 143 (285)
T 1wdy_A 64 DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER 143 (285)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHH
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -cCCCCCHHHHHHHcCCCcHHHHHHHhhC
Q 006616 609 -NREGKTSLELAVESNFADSEVLAILSDS 636 (638)
Q Consensus 609 -d~~g~TpL~~A~~~g~~d~eiv~lLle~ 636 (638)
+..|.||||+|+..|+ .+++++|++.
T Consensus 144 ~~~~g~t~L~~A~~~~~--~~~v~~Ll~~ 170 (285)
T 1wdy_A 144 LRKGGATALMDAAEKGH--VEVLKILLDE 170 (285)
T ss_dssp TTCCCCCHHHHHHHHTC--HHHHHHHHHT
T ss_pred hccCCCcHHHHHHHcCC--HHHHHHHHHh
Confidence 7889999999999998 8999999986
No 86
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.79 E-value=2.8e-19 Score=168.52 Aligned_cols=119 Identities=20% Similarity=0.191 Sum_probs=106.5
Q ss_pred cccccCCcccccccccCCCCC-CCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHH
Q 006616 518 TGNSSDRSSSGSLNLAGTSEG-QTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAK 596 (638)
Q Consensus 518 ~~~~~~~~~~~~~lL~~~~~~-~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~ 596 (638)
+.+...+....+..|+..+.+ ++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 7 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 86 (172)
T 3v30_A 7 HQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVG 86 (172)
T ss_dssp HHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHH
Confidence 333344455555556666655 8889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 597 LLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 597 lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+|+++|++++.+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 87 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~ga 126 (172)
T 3v30_A 87 LLLERDVDINIYDWNGGTPLLYAVRGNH--VKCVEALLARGA 126 (172)
T ss_dssp HHHTTTCCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 9999999999999999999999999998 999999999885
No 87
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.79 E-value=2.8e-19 Score=187.20 Aligned_cols=108 Identities=31% Similarity=0.409 Sum_probs=100.2
Q ss_pred CcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCC
Q 006616 524 RSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGA 603 (638)
Q Consensus 524 ~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~ga 603 (638)
....++.+|+..|++++..|..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 225 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 304 (351)
T 3utm_A 225 KRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS 304 (351)
T ss_dssp THHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 34567778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCC
Q 006616 604 DPRAVNREGKTSLELAVESNFADSEVLAILSDSH 637 (638)
Q Consensus 604 d~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~g 637 (638)
+++.+|..|.||+++| + .+++++|.+.+
T Consensus 305 d~~~~~~~g~tal~~a----~--~~~~~~l~~~~ 332 (351)
T 3utm_A 305 DPSIISLQGFTAAQMG----N--EAVQQILSEST 332 (351)
T ss_dssp CTTCCCTTSCCHHHHS----C--HHHHHHHHHC-
T ss_pred CCCCcCCCCCChhhhh----h--HHHHHHHHhcc
Confidence 9999999999999998 2 67888888764
No 88
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.79 E-value=1.3e-19 Score=168.75 Aligned_cols=119 Identities=21% Similarity=0.193 Sum_probs=109.9
Q ss_pred ccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHH
Q 006616 517 LTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAK 596 (638)
Q Consensus 517 l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~ 596 (638)
+..+...+....+..|+..|++++..|..|.||||+|+. |+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 9 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 87 (162)
T 1ihb_A 9 LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQ 87 (162)
T ss_dssp HHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 344445556667777888999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 597 LLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 597 lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+|+++|++++.+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 88 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~ 127 (162)
T 1ihb_A 88 TLLEFQADVNIEDNEGNLPLHLAAKEGH--LRVVEFLVKHTA 127 (162)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHHHSC
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHcCC--HHHHHHHHHccC
Confidence 9999999999999999999999999998 899999999875
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.79 E-value=5e-19 Score=160.46 Aligned_cols=100 Identities=28% Similarity=0.378 Sum_probs=94.0
Q ss_pred CCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCH
Q 006616 536 SEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTS 615 (638)
Q Consensus 536 ~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~Tp 615 (638)
|+|+ ..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 4566 678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcHHHHHHHhhCCC
Q 006616 616 LELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 616 L~~A~~~g~~d~eiv~lLle~ga 638 (638)
||+|+..|+ .+++++|+++|+
T Consensus 80 L~~A~~~~~--~~~v~~Ll~~ga 100 (137)
T 3c5r_A 80 LHDAAKNGH--VDIVKLLLSYGA 100 (137)
T ss_dssp HHHHHHTTC--HHHHHHHHHTTC
T ss_pred HHHHHHcCC--HHHHHHHHHcCC
Confidence 999999998 899999999885
No 90
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.79 E-value=3.7e-19 Score=169.06 Aligned_cols=109 Identities=29% Similarity=0.330 Sum_probs=102.1
Q ss_pred ccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCC
Q 006616 528 GSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRA 607 (638)
Q Consensus 528 ~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~ 607 (638)
+..+|...+.+++..|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 21 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 100 (179)
T 3f6q_A 21 VRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINA 100 (179)
T ss_dssp HHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 33344455788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 608 VNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 608 ~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 101 ~d~~g~t~L~~A~~~~~--~~~v~~Ll~~ga 129 (179)
T 3f6q_A 101 VNEHGNVPLHYACFWGQ--DQVAEDLVANGA 129 (179)
T ss_dssp CCTTSCCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHcCC--HHHHHHHHHCCC
Confidence 99999999999999998 899999999986
No 91
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.79 E-value=2.1e-19 Score=166.18 Aligned_cols=114 Identities=29% Similarity=0.324 Sum_probs=104.2
Q ss_pred cCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhC
Q 006616 522 SDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTR 601 (638)
Q Consensus 522 ~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~ 601 (638)
..+....+..|+..|++++ .|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 11 ~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 89 (153)
T 1awc_B 11 RAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKH 89 (153)
T ss_dssp HHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred HcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHc
Confidence 3344556666777777776 578899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 602 GADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 602 gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
|++++.+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 90 g~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~ga 124 (153)
T 1awc_B 90 GADVNAKDMLKMTALHWATEHNH--QEVVELLIKYGA 124 (153)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 99999999999999999999998 899999999885
No 92
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=3.7e-19 Score=193.24 Aligned_cols=178 Identities=21% Similarity=0.245 Sum_probs=150.5
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhcccc---CCCcccccccccCCccc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTSL---ERSSSSLTGNSSDRSSS 527 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~~---~~~~~~l~~~~~~~~~~ 527 (638)
..|+.|+..++.+ ++++|++.|+++|..+..+..+ .+..++++|+..+.... ....++++.+...+...
T Consensus 148 t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 226 (437)
T 1n11_A 148 TPLHVAAKYGKVR-VAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVE 226 (437)
T ss_dssp CHHHHHHHTTCHH-HHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHH-HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 5678888877765 5577779999999987766333 34466777765543321 12344566666677778
Q ss_pred ccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCC
Q 006616 528 GSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRA 607 (638)
Q Consensus 528 ~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~ 607 (638)
++..|+..|++++..+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 227 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 306 (437)
T 1n11_A 227 VARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA 306 (437)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 608 VNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 608 ~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+|..|.||||+|+..|+ .++|++|+++|+
T Consensus 307 ~~~~g~t~L~~A~~~g~--~~~v~~Ll~~ga 335 (437)
T 1n11_A 307 TTRMGYTPLHVASHYGN--IKLVKFLLQHQA 335 (437)
T ss_dssp CCSSCCCHHHHHHHSSC--SHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHcCc--HHHHHHHHhcCC
Confidence 99999999999999998 789999999885
No 93
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.79 E-value=1.4e-19 Score=168.15 Aligned_cols=138 Identities=18% Similarity=0.115 Sum_probs=106.1
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCC
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTS 536 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~ 536 (638)
...|+.|+..++.+.| ++|++.|+|+|..+..+ .++++++ . .+...++.+|+..|
T Consensus 13 ~t~L~~A~~~g~~~~v-~~Ll~~g~~~~~~~~~g---------------------~t~L~~A--~-~~~~~~v~~Ll~~g 67 (156)
T 1bi7_B 13 ADWLATAAARGRVEEV-RALLEAGANPNAPNSYG---------------------RRPIQVM--M-MGSARVAELLLLHG 67 (156)
T ss_dssp TTHHHHHHHHTCHHHH-HHHHTTTCCTTCCCSSS---------------------CCTTTSS--C-TTCHHHHHHHHTTT
T ss_pred hHHHHHHHHcCCHHHH-HHHHHcCCCCCCCCCCC---------------------CCHHHHH--H-cCCHHHHHHHHHcC
Confidence 4678899999887765 55568899999887655 3444443 3 56677888899999
Q ss_pred CCCCcCCCCCCc-HHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCH
Q 006616 537 EGQTMDDLEGCT-LLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTS 615 (638)
Q Consensus 537 ~~~~~~d~~G~T-pLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~Tp 615 (638)
++++..|..|.| |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 68 ~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 68 AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDA 147 (156)
T ss_dssp CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------
T ss_pred CCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcc
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 006616 616 LELA 619 (638)
Q Consensus 616 L~~A 619 (638)
.+-+
T Consensus 148 ~~~~ 151 (156)
T 1bi7_B 148 AEGP 151 (156)
T ss_dssp ----
T ss_pred cccC
Confidence 8744
No 94
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.78 E-value=4.4e-19 Score=175.29 Aligned_cols=178 Identities=20% Similarity=0.265 Sum_probs=148.7
Q ss_pred cceecccccccchhhhhhhcccccCccccccchhcc-------chhhHHHHHhhhhcccc----CCCcccccccccCCcc
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCI-------SSLTLAKAMLLNEQTSL----ERSSSSLTGNSSDRSS 526 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~-------~~~~l~~~ll~~~~~~~----~~~~~~l~~~~~~~~~ 526 (638)
..|+.|+..|+.+.+ +.|++.|+|+|..+..+... .+..+++.++....... ....++++.+...+..
T Consensus 11 ~~l~~A~~~g~~~~~-~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~ 89 (240)
T 3eu9_A 11 WDIVKATQYGIYERC-RELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHL 89 (240)
T ss_dssp CCHHHHHHTTCHHHH-HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCH
T ss_pred hHHHHHHHcCChHHH-HHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCH
Confidence 568889999887766 55668999999987766333 34567777776543322 1133455555556667
Q ss_pred cccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCC-HHHHHHHHhCCCCC
Q 006616 527 SGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGK-AMFAKLLLTRGADP 605 (638)
Q Consensus 527 ~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~-~~~v~lLl~~gad~ 605 (638)
.++.+|+..|++++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++ .+++++|++.|+++
T Consensus 90 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~ 169 (240)
T 3eu9_A 90 SMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV 169 (240)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCc
Confidence 77888899999999999999999999999999999999999999999999999999999997776 89999999999999
Q ss_pred CCccC-CCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 606 RAVNR-EGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 606 ~~~d~-~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+..+. .|.||||+|+..|+ .+++++|+++|+
T Consensus 170 ~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~ 201 (240)
T 3eu9_A 170 NLGDKYHKNTALHWAVLAGN--TTVISLLLEAGA 201 (240)
T ss_dssp TCCCTTTCCCHHHHHHHHTC--HHHHHHHHHHTC
T ss_pred chhhccCCCcHHHHHHHcCC--HHHHHHHHHcCC
Confidence 99997 99999999999998 899999999875
No 95
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.78 E-value=1e-18 Score=157.38 Aligned_cols=95 Identities=22% Similarity=0.381 Sum_probs=74.4
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
..++|+|||+|++ ..++|+||||||+ ++.|+||+++.+
T Consensus 6 ~~v~k~GwL~K~g--~~k~WkrRWfVLk-~~~L~yyk~~~~--------------------------------------- 43 (130)
T 1v88_A 6 SGIVMADWLKIRG--TLKSWTKLWCVLK-PGVLLIYKTQKN--------------------------------------- 43 (130)
T ss_dssp SSCCEEEEEEECC--SSSSCEEEEEEEE-TTEEEEESCSSS---------------------------------------
T ss_pred CceEEEeEEEEeC--CCCCceEEEEEEE-CCEEEEECCCCC---------------------------------------
Confidence 4568999999985 5679999999998 678888877532
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEecCC------------------------eeEEEEeCCHHHHHHHHHHHHHH
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIISPT------------------------KNYTLQAESALDQMDWIEKITGV 232 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~------------------------rt~~lqA~se~e~~~Wi~ai~~~ 232 (638)
..+.+.|.|..|+|...+ +..++|||+|.+|. ++|+|+|+|++|+++||.||+.+
T Consensus 44 ~~p~G~I~L~~~~v~~~~-~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a 122 (130)
T 1v88_A 44 GQWVGTVLLNACEIIERP-SKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELA 122 (130)
T ss_dssp CCCCEEEECSSCEECCCC-TTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCEEEECC-CCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHH
Confidence 223456888888876432 33456999999864 34899999999999999999998
Q ss_pred HH
Q 006616 233 IA 234 (638)
Q Consensus 233 i~ 234 (638)
|.
T Consensus 123 ~~ 124 (130)
T 1v88_A 123 LK 124 (130)
T ss_dssp HT
T ss_pred Hh
Confidence 74
No 96
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=6.3e-19 Score=156.82 Aligned_cols=103 Identities=24% Similarity=0.462 Sum_probs=82.0
Q ss_pred CcceeEEEEEEeecCCCCCCceeeEEEEec-CceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCC
Q 006616 96 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDS-RGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 174 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~-~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 174 (638)
...++++|||+|+++ ..+.|+||||||+. ++.|+||+.+...
T Consensus 5 ~~~~~~~G~L~K~~~-~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~------------------------------------ 47 (120)
T 2d9x_A 5 SSGENVYGYLMKYTN-LVTGWQYRFFVLNNEAGLLEYFVNEQSR------------------------------------ 47 (120)
T ss_dssp CSCCCCEEEEEEEEE-TTTEEEEEEEEECTTTCEEEEESSGGGS------------------------------------
T ss_pred CCCCcEEEEEEecCC-CCCCceEEEEEEECCCCEEEEEecCccc------------------------------------
Confidence 345679999999964 56789999999986 6899999875331
Q ss_pred ccccccceeecccceeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006616 175 EKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASLLSS 239 (638)
Q Consensus 175 ~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~~~~~ 239 (638)
...+.+.|+|..+.|.+.. ++++||+|++++ ++|+|+|+|++|+++||.+|+.+|......
T Consensus 48 -~~~~~g~I~L~~~~v~~~~---~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (120)
T 2d9x_A 48 -NQKPRGTLQLAGAVISPSD---EDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTEA 109 (120)
T ss_dssp -SSCCSEEEECTTCCEECCS---SSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCccceEEcceEEEEecC---CCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHHhhhh
Confidence 1124456888888877532 457999999997 999999999999999999999999766544
No 97
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.78 E-value=8.1e-19 Score=164.12 Aligned_cols=111 Identities=27% Similarity=0.268 Sum_probs=102.0
Q ss_pred ccccccc-cCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCC
Q 006616 526 SSGSLNL-AGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGAD 604 (638)
Q Consensus 526 ~~~~~lL-~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad 604 (638)
...+..| ...+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 21 ~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 100 (165)
T 3twr_A 21 VETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV 100 (165)
T ss_dssp HHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Confidence 3334334 446778888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 605 PRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 605 ~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
++.+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 101 ~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~ga 132 (165)
T 3twr_A 101 VNVADLWKFTPLHEAAAKGK--YEICKLLLQHGA 132 (165)
T ss_dssp TTCCCTTCCCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred CCCcCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 99999999999999999998 899999999885
No 98
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.78 E-value=1.6e-19 Score=177.63 Aligned_cols=150 Identities=21% Similarity=0.261 Sum_probs=121.1
Q ss_pred cceecccccccchhhhhhhcccc--cCccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFE--VDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGT 535 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~g--aDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~ 535 (638)
..|+.|+..++.+ ++++|++.| +++|..+..+ .++++.+...+...++.+|+..
T Consensus 74 t~L~~A~~~~~~~-~~~~Ll~~g~~~~~~~~~~~g-----------------------~t~L~~A~~~~~~~~~~~Ll~~ 129 (228)
T 2dzn_A 74 TPFHIACSVGNLE-VVKSLYDRPLKPDLNKITNQG-----------------------VTCLHLAVGKKWFEVSQFLIEN 129 (228)
T ss_dssp CHHHHHHHHCCHH-HHHHHHSSSSCCCTTCCCTTC-----------------------CCHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHcCCHH-HHHHHHhCCCCcccccCCcCC-----------------------CCHHHHHHHcCCHhHHHHHHHc
Confidence 3455555555443 334455655 5555554433 2334444455666778888899
Q ss_pred CCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHhCCHHHHHHHH-hCCCCCCCccCCCC
Q 006616 536 SEGQTMDDLEGCTLLHLACDSADIGMLELLLQYG-ANINATDSRGLTPLHRCILRGKAMFAKLLL-TRGADPRAVNREGK 613 (638)
Q Consensus 536 ~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~~~~v~lLl-~~gad~~~~d~~g~ 613 (638)
|++++..|..|.||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+ ++|++++.+|..|.
T Consensus 130 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~ 209 (228)
T 2dzn_A 130 GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA 209 (228)
T ss_dssp TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSC
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCC
Confidence 9999999999999999999999999999999999 999999999999999999999999999999 88999999999999
Q ss_pred CHHHHHHHcCCCcHHHHHHHhhC
Q 006616 614 TSLELAVESNFADSEVLAILSDS 636 (638)
Q Consensus 614 TpL~~A~~~g~~d~eiv~lLle~ 636 (638)
|||++|+.. +++++|+++
T Consensus 210 t~l~~A~~~-----~~~~~l~~~ 227 (228)
T 2dzn_A 210 KAEDVALNE-----QVKKFFLNN 227 (228)
T ss_dssp BGGGGCSST-----THHHHHHTT
T ss_pred cHHHHHHHH-----HHHHHHHhc
Confidence 999999654 478888764
No 99
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=2.5e-18 Score=152.76 Aligned_cols=102 Identities=24% Similarity=0.379 Sum_probs=81.1
Q ss_pred cceeEEEEEEeecC-CCCCCceeeEEEEecCc-eEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCC
Q 006616 97 VQTIRQGYLSKRSS-NLRGDWKRRFFVLDSRG-MLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 174 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~-~~~~~WkrRwfvL~~~~-~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 174 (638)
..++++|||+|+++ ...+.|+||||||.+++ .|+||++..+
T Consensus 6 ~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~------------------------------------- 48 (119)
T 2dhk_A 6 SGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQD------------------------------------- 48 (119)
T ss_dssp SCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTC-------------------------------------
T ss_pred CCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCC-------------------------------------
Confidence 45678999999975 25789999999999654 8888877543
Q ss_pred ccccccceeecccceeecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006616 175 EKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSS 239 (638)
Q Consensus 175 ~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~~ 239 (638)
..+.+.|+|..+++... ...+++||.|.++.|+|+|+|+|++|+++||.+|+.++....+.
T Consensus 49 --~~~~g~I~L~~~~~~~~--~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (119)
T 2dhk_A 49 --ANPLDSIDLSSAVFDCK--ADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHNS 109 (119)
T ss_dssp --CSCSEEEEGGGCEEEEC--TTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred --cccccEEECCCCEEEec--CCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcCC
Confidence 12345578877776543 22457999999999999999999999999999999999877655
No 100
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.77 E-value=1.8e-18 Score=159.09 Aligned_cols=96 Identities=16% Similarity=0.244 Sum_probs=71.9
Q ss_pred ceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 98 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
.++|+|||+|+++ ..++|+||||||++ ..||||+++.+.
T Consensus 17 pv~keG~L~Kkg~-~~k~WkrRWFvLk~-~~L~Yyk~~~d~--------------------------------------- 55 (149)
T 1x1f_A 17 PLYFEGFLLIKRS-GYREYEHYWTELRG-TTLFFYTDKKSI--------------------------------------- 55 (149)
T ss_dssp CEEEEEEEEEECT-TCCSCEEEEEEEET-TEEEEESCSSCS---------------------------------------
T ss_pred CccEEEEEEEeCC-CCCCceeEEEEEcC-CEEEEEeCCCcc---------------------------------------
Confidence 3789999999965 46899999999985 567777665331
Q ss_pred cccceeecccceeecC-CCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 178 AARHTVNLLTSTIKVD-ADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 178 ~~~~~i~l~~~~v~~~-~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
.+.+.|+|..+++... .....+++||.|++++++|+|+|+|++|+++||.+|+.++.
T Consensus 56 ~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 56 IYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp SCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 1223466665554421 11123579999999999999999999999999999998765
No 101
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.77 E-value=1.6e-19 Score=184.48 Aligned_cols=154 Identities=18% Similarity=0.160 Sum_probs=129.8
Q ss_pred ceecccccccchhhhhhhcccccC--ccccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccCCC
Q 006616 459 QIWEGVRTNDKKAVYRHIVNFEVD--VNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAGTS 536 (638)
Q Consensus 459 ~L~~Av~~~d~~~v~~lLl~~gaD--vN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~~~ 536 (638)
.++.|+..++...+..++ ..+++ +|..+..+ .++++.+...+...++.+|+..|
T Consensus 79 ~l~~a~~~~~~~~~~~l~-~~~~~~~~n~~d~~g-----------------------~T~Lh~A~~~g~~~~v~~Ll~~g 134 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMS-ARLLDYVVNIADSNG-----------------------NTALHYSVSHANFPVVQQLLDSG 134 (276)
T ss_dssp TCCHHHHHHHHHHHHHHC-HHHHHHHHTCCCTTS-----------------------CCHHHHHHHTTCHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHHH-HHHHhhcCcCCCCCC-----------------------CCHHHHHHHCCCHHHHHHHHHCC
Confidence 356677777776665444 55555 77776655 23344444556667788888888
Q ss_pred C-CCCcCCCCCCcHHHHHH-----HhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccC
Q 006616 537 E-GQTMDDLEGCTLLHLAC-----DSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNR 610 (638)
Q Consensus 537 ~-~~~~~d~~G~TpLh~Aa-----~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~ 610 (638)
+ +++..|..|.||||+|+ ..++.+++++|++.|++++..|..|+||||+|+..|+.++|++|+++|++++.+|.
T Consensus 135 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~ 214 (276)
T 4hbd_A 135 VCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDD 214 (276)
T ss_dssp CCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Confidence 7 99999999999999999 66889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHcCCCcHHHHHHHhh-CCC
Q 006616 611 EGKTSLELAVESNFADSEVLAILSD-SHG 638 (638)
Q Consensus 611 ~g~TpL~~A~~~g~~d~eiv~lLle-~ga 638 (638)
+|.||||+|+..|+ .++|++|++ .|+
T Consensus 215 ~G~TpLh~A~~~g~--~~iv~~Ll~~~ga 241 (276)
T 4hbd_A 215 DGSTALMCACEHGH--KEIAGLLLAVPSC 241 (276)
T ss_dssp TSCCHHHHHHHHTC--HHHHHHHHTSTTC
T ss_pred CCCCHHHHHHHCCC--HHHHHHHHhcCCC
Confidence 99999999999998 899999999 664
No 102
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.77 E-value=1.7e-19 Score=188.88 Aligned_cols=162 Identities=13% Similarity=0.013 Sum_probs=127.2
Q ss_pred hhhhhcccccCccccccch--hccchhhHHHHHhhhhccccCCCcccc---------------------cccccCCcccc
Q 006616 472 VYRHIVNFEVDVNAVYEQV--SCISSLTLAKAMLLNEQTSLERSSSSL---------------------TGNSSDRSSSG 528 (638)
Q Consensus 472 v~~lLl~~gaDvN~~~~~~--~~~~~~~l~~~ll~~~~~~~~~~~~~l---------------------~~~~~~~~~~~ 528 (638)
++++|++.|+|+|..+..+ ...++..+++.|+..+..... ....+ +.+.......+
T Consensus 34 lv~~ll~~ga~i~~~~~~g~~~~~g~~~~v~~Ll~~g~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 112 (327)
T 1sw6_A 34 LTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEI-QEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEV 112 (327)
T ss_dssp CCCSTTTSSCCCEECBCCCCCCCHHHHHHHHHHHHHHHC--------------------------------CHHHHHHHH
T ss_pred hHHHHhhCCcccccCCCCCCcccCchhHHHHHHHHhccCCcc-ccchHhhhcccccccccccCCccchhHHHHHhhHHHH
Confidence 4677788899988876655 333556777777655433221 11111 12222233356
Q ss_pred cccccCCCCCCCc-CCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCC---HHHHHHHHhCC-C
Q 006616 529 SLNLAGTSEGQTM-DDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGK---AMFAKLLLTRG-A 603 (638)
Q Consensus 529 ~~lL~~~~~~~~~-~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~---~~~v~lLl~~g-a 603 (638)
..+|+..|+++|. .|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+|+..|+ .++++.|++++ +
T Consensus 113 ~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~ 192 (327)
T 1sw6_A 113 NDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP 192 (327)
T ss_dssp HHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG
T ss_pred HHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhc
Confidence 6778899999999 89999999999999999999999999999999999999999999999998 78888888886 8
Q ss_pred CCCCccCCCCCHHHHHHH----cCCCcHHHHHHHhhC
Q 006616 604 DPRAVNREGKTSLELAVE----SNFADSEVLAILSDS 636 (638)
Q Consensus 604 d~~~~d~~g~TpL~~A~~----~g~~d~eiv~lLle~ 636 (638)
+++.+|..|.||||+|+. .|+ .+++++|++.
T Consensus 193 ~~~~~d~~g~tpLh~A~~~~~~~g~--~~~v~~Ll~~ 227 (327)
T 1sw6_A 193 CLILEDSMNRTILHHIIITSGMTGC--SAAAKYYLDI 227 (327)
T ss_dssp GGGEECTTCCCHHHHHHHHHTSTTC--HHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHcccccc--HHHHHHHHHH
Confidence 899999999999999999 777 8999999876
No 103
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.77 E-value=2.1e-19 Score=159.87 Aligned_cols=113 Identities=28% Similarity=0.390 Sum_probs=100.2
Q ss_pred cccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHH
Q 006616 516 SLTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFA 595 (638)
Q Consensus 516 ~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v 595 (638)
.++.+...+....+..|+..+++++..|..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++
T Consensus 10 ~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v 89 (123)
T 3aaa_C 10 EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCV 89 (123)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHH
Confidence 34445555666677778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHH
Q 006616 596 KLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAIL 633 (638)
Q Consensus 596 ~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lL 633 (638)
++|+++|++++.+|.+|.||||+|.. .++.++|
T Consensus 90 ~~Ll~~ga~~~~~~~~g~t~l~~A~~-----~~~~~ll 122 (123)
T 3aaa_C 90 KLLLSKGADKTVKGPDGLTAFEATDN-----QAIKALL 122 (123)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHCCC-----HHHHHHH
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHhCC-----HHHHHHh
Confidence 99999999999999999999999932 4455554
No 104
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.77 E-value=6.1e-19 Score=159.86 Aligned_cols=100 Identities=26% Similarity=0.343 Sum_probs=96.6
Q ss_pred CCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCC-CCC
Q 006616 536 SEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNRE-GKT 614 (638)
Q Consensus 536 ~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~-g~T 614 (638)
+++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++.+|.. |.|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 56889999999999999999999999999999999999999999999999999 9999999999999999999999 999
Q ss_pred HHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 615 SLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 615 pL~~A~~~g~~d~eiv~lLle~ga 638 (638)
|||+|+..|+ .+++++|+++|+
T Consensus 81 ~L~~A~~~~~--~~~v~~Ll~~ga 102 (136)
T 1d9s_A 81 PVHDAAREGF--LDTLVVLHRAGA 102 (136)
T ss_dssp HHHHHHHHTC--HHHHHHHHHTCC
T ss_pred HHHHHHHcCC--HHHHHHHHHcCC
Confidence 9999999998 899999999885
No 105
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.77 E-value=5.5e-18 Score=148.85 Aligned_cols=99 Identities=25% Similarity=0.447 Sum_probs=77.1
Q ss_pred ceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 98 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
.++++|||+|+++ ..+.|+||||||. ++.|+||++... .
T Consensus 4 ~~~~~G~L~K~g~-~~~~Wk~R~fvL~-~~~L~yy~~~~~---------------------------------------~ 42 (113)
T 1pls_A 4 KRIREGYLVKKGS-VFNTWKPMWVVLL-EDGIEFYKKKSD---------------------------------------N 42 (113)
T ss_dssp CCSEEEEEEEESS-SSSCCEEEEEEEE-TTEEEEESSTTC---------------------------------------S
T ss_pred CCcEEEEEEEeCC-CCCCceEEEEEEE-CCEEEEEeCCCC---------------------------------------C
Confidence 4679999999954 5678999999999 567788876532 1
Q ss_pred cccceeecccceeec-CCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006616 178 AARHTVNLLTSTIKV-DADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASLL 237 (638)
Q Consensus 178 ~~~~~i~l~~~~v~~-~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~~~ 237 (638)
.+.+.|+|..+++.. ..+...++|||+|++++ ++|+|+|+|++|+++||.+|+.+|....
T Consensus 43 ~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 104 (113)
T 1pls_A 43 SPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIE 104 (113)
T ss_dssp SCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHT
T ss_pred CcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhccc
Confidence 233457777766643 23445678999999987 8999999999999999999999997644
No 106
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.76 E-value=1.7e-18 Score=155.11 Aligned_cols=99 Identities=26% Similarity=0.518 Sum_probs=72.0
Q ss_pred eEEEEEEeecCCCCCCceeeEEEEec--CceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 100 IRQGYLSKRSSNLRGDWKRRFFVLDS--RGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 100 ~k~GyL~Kr~~~~~~~WkrRwfvL~~--~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
.++|||.|+++...+.|+||||||+. +.+||||+++.+.+.+ .
T Consensus 16 ~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~-----------------------------------~ 60 (126)
T 1v5p_A 16 RICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVG-----------------------------------A 60 (126)
T ss_dssp CEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTT-----------------------------------C
T ss_pred ceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCC-----------------------------------c
Confidence 47999999975567899999999984 5578887764221111 1
Q ss_pred cccceeeccc-ceeecCC--CCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 178 AARHTVNLLT-STIKVDA--DQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 178 ~~~~~i~l~~-~~v~~~~--~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
.+.+.|.|.. +.|.... ...+++|||.|.++.|+|+|+|+|++|+++||++|+.++
T Consensus 61 ~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~ 119 (126)
T 1v5p_A 61 GAVGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQAS 119 (126)
T ss_dssp CCSEEEETTTCCEEEECCTTTSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred eeeEEEECCCccEEecCCcccCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHH
Confidence 2334455554 3444321 233568999999999999999999999999999999775
No 107
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.76 E-value=8.7e-19 Score=174.90 Aligned_cols=119 Identities=17% Similarity=0.204 Sum_probs=89.3
Q ss_pred ccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHH
Q 006616 517 LTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAK 596 (638)
Q Consensus 517 l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~ 596 (638)
++.+........+..|+..|++++.. ..|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.++++
T Consensus 9 L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~ 87 (239)
T 1ycs_B 9 LPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVK 87 (239)
T ss_dssp -----------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 34444455566777888999999875 67999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 597 LLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 597 lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+|+++|++++.+|..|.||||+|+..|+ .++|++|+++|+
T Consensus 88 ~Ll~~ga~~~~~d~~g~tpL~~A~~~~~--~~~v~~Ll~~ga 127 (239)
T 1ycs_B 88 FLVQFGVNVNAADSDGWTPLHCAASCNN--VQVCKFLVESGA 127 (239)
T ss_dssp HHHHHTCCTTCCCTTCCCHHHHHHHTTC--HHHHHHHHHTTC
T ss_pred HHHHcCCCCCccCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 9999999999999999999999999998 899999999986
No 108
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.76 E-value=4.6e-18 Score=148.41 Aligned_cols=95 Identities=23% Similarity=0.411 Sum_probs=75.2
Q ss_pred ceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 98 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
.++++|||+|++ ...+.|+||||||+ ++.|+||+.+.. .
T Consensus 7 ~~~~~G~L~K~~-~~~~~Wk~RwfvL~-~~~L~yyk~~~~---------------------------------------~ 45 (109)
T 1wgq_A 7 GSTMSGYLYRSK-GSKKPWKHLWFVIK-NKVLYTYAASED---------------------------------------V 45 (109)
T ss_dssp SCSCEEEEEEES-STTSCCEEEEEEEE-TTEEEEESCTTC---------------------------------------S
T ss_pred CCeEEEEEEeCC-CCCCCceeEEEEEe-CCEEEEECCCCc---------------------------------------C
Confidence 456899999995 44679999999998 688888876532 1
Q ss_pred cccceeecccceeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 178 AARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 178 ~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
.+.+.|+|..+++....+...++|||+|++++ ++|+|+|+|++|+++||.+|+.++
T Consensus 46 ~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~ 102 (109)
T 1wgq_A 46 AALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGT 102 (109)
T ss_dssp SCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHh
Confidence 23345778777776544444567999999886 689999999999999999999886
No 109
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.76 E-value=5e-18 Score=153.26 Aligned_cols=107 Identities=18% Similarity=0.291 Sum_probs=72.1
Q ss_pred CCcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCC-CCCCCCccccccCcCcccCCccccccccccCCCCC
Q 006616 95 GKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSK-SSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 173 (638)
Q Consensus 95 ~~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~-~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 173 (638)
+...++|+|||+|++ +..+.|+||||||..++.|+||+++... +.|.+.+
T Consensus 4 ~~~~v~~~G~L~K~g-~~~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l---------------------------- 54 (130)
T 2d9v_A 4 GSSGLVRGGWLWRQS-SILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVI---------------------------- 54 (130)
T ss_dssp SCCCEEEEEEEEEEC-SSSCCEEEEEEEEETTTEEEEESSSSTTSEEEEEEC----------------------------
T ss_pred CCCceeEEEEEEeec-CccCCceeeEEEEccCCEEEEEeCCCCCCcCceEec----------------------------
Confidence 345678999999995 4578999999999558899999876431 1111000
Q ss_pred Cccccccceeecc-cc-eeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 174 DEKSAARHTVNLL-TS-TIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 174 ~~~~~~~~~i~l~-~~-~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
......+.+. .| .+.. ++...++|||+|++++ |+|+|+|+|++|+++||+||+.++.
T Consensus 55 ---~~~~~~i~~~~~~~~v~~-~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 55 ---HFNVRDIKVGQECQDVQP-PEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp ---TTTEEEEEEGGGCSSCCC-CSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ---ccceeEEeccccccccCC-CCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 0000001110 11 1221 2344678999999965 9999999999999999999998874
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.76 E-value=1.1e-18 Score=153.25 Aligned_cols=96 Identities=33% Similarity=0.473 Sum_probs=92.7
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHH
Q 006616 541 MDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAV 620 (638)
Q Consensus 541 ~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~ 620 (638)
.+|.+|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCcHHHHHHHhhCCC
Q 006616 621 ESNFADSEVLAILSDSHG 638 (638)
Q Consensus 621 ~~g~~d~eiv~lLle~ga 638 (638)
..++ .+++++|+++||
T Consensus 84 ~~~~--~~~~~~Ll~~ga 99 (115)
T 2l6b_A 84 KNGH--HEIVKLLDAKGA 99 (115)
T ss_dssp TTTC--HHHHHHHHTTSS
T ss_pred HCCC--HHHHHHHHHcCC
Confidence 9998 899999999986
No 111
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=6.3e-18 Score=148.81 Aligned_cols=102 Identities=22% Similarity=0.428 Sum_probs=78.3
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
..++++|||+|+++ ..+.|++|||||. ++.|+||+.+..
T Consensus 6 ~~~~~~G~L~K~~~-~~~~Wk~R~fvL~-~~~L~yy~~~~~--------------------------------------- 44 (115)
T 2dn6_A 6 SGVLKQGYMMKKGH-RRKNWTERWFVLK-PNIISYYVSEDL--------------------------------------- 44 (115)
T ss_dssp CSCSEEEEEEEECT-TSSCEEEEEEEEC-SSCEEEESSTTC---------------------------------------
T ss_pred CCceEEEEEEecCC-CCCCcEEeEEEEE-CCEEEEeCCCCC---------------------------------------
Confidence 45679999999954 5778999999998 567777776432
Q ss_pred ccccceeeccc-ceeecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006616 177 SAARHTVNLLT-STIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSS 239 (638)
Q Consensus 177 ~~~~~~i~l~~-~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~~ 239 (638)
..+.+.|.|.. +.|...++...+++||.|.+++++|+|+|+|++|+++||.+|+.+|...-..
T Consensus 45 ~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~~ 108 (115)
T 2dn6_A 45 KDKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLKLG 108 (115)
T ss_dssp SSEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHhcC
Confidence 12334566654 3455434444678999999999999999999999999999999999865544
No 112
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.76 E-value=5.3e-18 Score=152.76 Aligned_cols=111 Identities=22% Similarity=0.361 Sum_probs=79.4
Q ss_pred cceeEEEEEEee----cC-CCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCC
Q 006616 97 VQTIRQGYLSKR----SS-NLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGG 171 (638)
Q Consensus 97 ~~~~k~GyL~Kr----~~-~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 171 (638)
..++|+|||.|+ ++ ..+++|++|||||. ++.|+||+.+.....+..
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~-~~~L~yykd~~~~~~~~~---------------------------- 60 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLT-GNSLVFYREPPPTAPSSG---------------------------- 60 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECCCCCEEEEEEEE-SSEEEEESCC------------------------------------
T ss_pred cceeEEEEEEEeeeccCCCcCCCCceEEEEEEe-CCEEEEEcCccccccccc----------------------------
Confidence 457899999985 23 24589999999999 566777776532111100
Q ss_pred CCCccccccceeecccceeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006616 172 VHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASL 236 (638)
Q Consensus 172 ~~~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~~ 236 (638)
..+....+.+.|+|..|++....+...++|||+|.+++ ++|+|||+|++||++||.+|+.+|...
T Consensus 61 ~~~~~~~p~g~I~L~~~~v~~~~~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 61 WGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp ------CCSEEEECTTCEEEECTTSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCccEEEeCCcEEEECCCCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 00012345567899999887655556778999999986 689999999999999999999999764
No 113
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.76 E-value=2.5e-19 Score=176.38 Aligned_cols=125 Identities=22% Similarity=0.249 Sum_probs=106.4
Q ss_pred cCCCcccccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHH
Q 006616 510 LERSSSSLTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQY-GANINATDSRGLTPLHRCIL 588 (638)
Q Consensus 510 ~~~~~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~-gadvn~~d~~G~TpLh~A~~ 588 (638)
.+.++++++ ...+....+..|+..|++++..|..|+||||+||..|+.++|++|+++ |+++|.+|..|+||||+|+.
T Consensus 72 ~g~t~L~~A--~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 72 SIDNPLHEA--AKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EESCHHHHH--HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccc--cccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 334444444 444556677788889999999999999999999999999999999999 99999999999999999999
Q ss_pred hCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 589 RGKAMFAKLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 589 ~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
.|+.+++++|+++|++++.+|..|.|||++|+..++ .++++.|++.|+
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~--~~~l~~l~~~~~ 197 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAAC--ASLLKKKQGTDA 197 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHH--HHHHC-------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhH--HHHHHHHhccch
Confidence 999999999999999999999999999999999987 899999998774
No 114
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.76 E-value=2.6e-18 Score=153.45 Aligned_cols=105 Identities=23% Similarity=0.394 Sum_probs=78.3
Q ss_pred cceeEEEEEEeecCC-------CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccC
Q 006616 97 VQTIRQGYLSKRSSN-------LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYH 169 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~-------~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 169 (638)
..++|+|||+|+... ..+.|++|||||+ ++.|+||+.+.....+.
T Consensus 6 ~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~-~~~L~yyk~~~~~~~~~--------------------------- 57 (123)
T 1wjm_A 6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLR-RGSLGFYKDAKAASAGV--------------------------- 57 (123)
T ss_dssp CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEE-TTEEEEESSHHHHTTTC---------------------------
T ss_pred CCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEE-CCEEEEEEcccccccCc---------------------------
Confidence 446799999998532 2679999999998 56778887653311110
Q ss_pred CCCCCccccccceeecccceeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 170 GGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 170 ~~~~~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
.......|+|..|.+.+..+...++|||+|++++ ++|+|||+|++||++||.+|+.+|..
T Consensus 58 ------~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~ 118 (123)
T 1wjm_A 58 ------PYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIAS 118 (123)
T ss_dssp ------BSSSCCCEECTTCEEEECTTCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ------ccCCCceEEccCcEEeecccccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 0112234777777777655556789999999887 89999999999999999999999874
No 115
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.76 E-value=1.4e-18 Score=165.92 Aligned_cols=119 Identities=24% Similarity=0.229 Sum_probs=103.1
Q ss_pred ccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHhCCHHHH
Q 006616 517 LTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATD-SRGLTPLHRCILRGKAMFA 595 (638)
Q Consensus 517 l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d-~~G~TpLh~A~~~g~~~~v 595 (638)
++.+...+....+..|+. +++++..|..|+||||+|+..|+.+++++|+++|+++|.+| ..|+||||+|+..|+.+++
T Consensus 48 L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v 126 (183)
T 3deo_A 48 WWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVV 126 (183)
T ss_dssp HHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHH
Confidence 344444555566666777 99999999999999999999999999999999999999998 8899999999999999999
Q ss_pred HHHHhCCCCCCCccCCCCCHHHHHHHcCCC--------------cHHHHHHHhhC
Q 006616 596 KLLLTRGADPRAVNREGKTSLELAVESNFA--------------DSEVLAILSDS 636 (638)
Q Consensus 596 ~lLl~~gad~~~~d~~g~TpL~~A~~~g~~--------------d~eiv~lLle~ 636 (638)
++|+++|++++.+|.+|.||||+|+..++. ..+++++|.++
T Consensus 127 ~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 127 EALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 999999999999999999999999876321 15788887765
No 116
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.75 E-value=5.1e-18 Score=152.14 Aligned_cols=98 Identities=23% Similarity=0.519 Sum_probs=78.2
Q ss_pred CcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 96 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
...++++|||+|++ +..+.|++|||||. ++.|+||+++..
T Consensus 15 ~~~~~~~G~L~K~g-~~~~~Wk~R~fvL~-~~~L~yy~~~~~-------------------------------------- 54 (126)
T 1fao_A 15 PSLGTKEGYLTKQG-GLVKTWKTRWFTLH-RNELKYFKDQMS-------------------------------------- 54 (126)
T ss_dssp CCTTCEEEEEEEEC-SSSCCEEEEEEEEE-TTEEEEESSTTC--------------------------------------
T ss_pred CCCccEEEEEEEcC-CCCCCcccEEEEEE-CCEEEEeCCCCC--------------------------------------
Confidence 34567999999995 45778999999998 567888876532
Q ss_pred cccccceeecccce-eecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTST-IKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 176 ~~~~~~~i~l~~~~-v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
..+.+.|+|..|. +.+ .+..+++|||.|++++++|+|+|+|++|+++||.+|+.+|..
T Consensus 55 -~~~~g~i~L~~~~~v~~-~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 55 -PEPIRILDLTECSAVQF-DYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp -SSCSEEEEGGGCCEEEE-ECSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred -CCceeEEEccceEEEEe-cccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 1234457787777 443 334567899999999999999999999999999999999976
No 117
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=4.5e-18 Score=148.61 Aligned_cols=93 Identities=16% Similarity=0.249 Sum_probs=74.8
Q ss_pred eEEEEEEeecCCCCCCceeeEEEEecC--ceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 100 IRQGYLSKRSSNLRGDWKRRFFVLDSR--GMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 100 ~k~GyL~Kr~~~~~~~WkrRwfvL~~~--~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
++.|||+|+. + .+.|+||||||.++ ..||||+.+.+ .
T Consensus 9 ~~~G~L~k~~-~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~d---------------------------------------~ 47 (112)
T 2coc_A 9 LLCGPLRLSE-S-GETWSEVWAAIPMSDPQVLHLQGGSQD---------------------------------------G 47 (112)
T ss_dssp SSEEEEEEES-S-SSCEEEEEEECCTTCTTCEEEECCTTC---------------------------------------S
T ss_pred eEEEEEEecC-C-CCCceEEEEEEECCCccEEEEECCCCc---------------------------------------c
Confidence 4679999974 3 67899999999865 48998877543 1
Q ss_pred cccceeecccceeec--CCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 178 AARHTVNLLTSTIKV--DADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 178 ~~~~~i~l~~~~v~~--~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
.+.+.|.|..|+|.. ..+..+++|||+|+.+.++|+|+|+|++++++||++|+.|+
T Consensus 48 ~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~~~y~f~A~s~e~~~~Wl~al~~A~ 105 (112)
T 2coc_A 48 RLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLSASSAELQQQWLETLSTAA 105 (112)
T ss_dssp SSCSEECGGGCEEECCCSSSCCSSSEEEEEEETTEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CcceEEEcCCCEEEecCcccccCCCCEEEEecCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 233568888898884 23445678999999999999999999999999999999875
No 118
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.75 E-value=3e-18 Score=169.29 Aligned_cols=142 Identities=23% Similarity=0.269 Sum_probs=116.7
Q ss_pred hhhHHHHHhhhhccc----cCCCcccccccccCCcccccccccCCCCCC-----CcCCCCCCcHHHHHHHhCCHHHHHHH
Q 006616 495 SLTLAKAMLLNEQTS----LERSSSSLTGNSSDRSSSGSLNLAGTSEGQ-----TMDDLEGCTLLHLACDSADIGMLELL 565 (638)
Q Consensus 495 ~~~l~~~ll~~~~~~----~~~~~~~l~~~~~~~~~~~~~lL~~~~~~~-----~~~d~~G~TpLh~Aa~~g~~~~v~~L 565 (638)
+..+++.++...... .....++++.+...+...++.+|+..++++ +..|..|.||||+|+..|+.+++++|
T Consensus 15 ~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 94 (232)
T 2rfa_A 15 DVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRAL 94 (232)
T ss_dssp CHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHH
Confidence 445666666541111 112234455555566777788888888876 67788999999999999999999999
Q ss_pred HHcCCCCcccCC-------------CCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHH--
Q 006616 566 LQYGANINATDS-------------RGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVESNFADSEVL-- 630 (638)
Q Consensus 566 l~~gadvn~~d~-------------~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv-- 630 (638)
+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++
T Consensus 95 l~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~--~~~~~~ 172 (232)
T 2rfa_A 95 LARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPN--KTFACQ 172 (232)
T ss_dssp HHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSC--HHHHHH
T ss_pred HhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC--hHHHHH
Confidence 999999998865 79999999999999999999999999999999999999999999998 6666
Q ss_pred --HHHhhCCC
Q 006616 631 --AILSDSHG 638 (638)
Q Consensus 631 --~lLle~ga 638 (638)
++|+++|+
T Consensus 173 i~~~Ll~~g~ 182 (232)
T 2rfa_A 173 MYNLLLSYDG 182 (232)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhcCC
Confidence 99999875
No 119
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.75 E-value=9.9e-18 Score=149.45 Aligned_cols=98 Identities=28% Similarity=0.481 Sum_probs=78.0
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
..++++|||+|+++...+.|++|||||. ++.|+||+....
T Consensus 9 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~-~~~L~yy~~~~~--------------------------------------- 48 (123)
T 1upq_A 9 LPVHIRGWLHKQDSSGLRLWKRRWFVLS-GHCLFYYKDSRE--------------------------------------- 48 (123)
T ss_dssp SCEEEEEEEEEECSSSSCCEEEEEEEEE-TTEEEEESSTTC---------------------------------------
T ss_pred CCceEEEEEEeeCCCCCCCceeEEEEEe-CCEEEEECCCCC---------------------------------------
Confidence 3468999999997556789999999998 778888876532
Q ss_pred ccccceeecccceeecCCC--CCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 177 SAARHTVNLLTSTIKVDAD--QSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~--~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
..+.+.|.|..+.|..... ..+++|||.|.+++ ++|+|+|+|++|+++||.+|+.++.
T Consensus 49 ~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 49 ESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp CSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 1233457777777765432 23578999999987 9999999999999999999999885
No 120
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.75 E-value=9.8e-18 Score=146.05 Aligned_cols=97 Identities=27% Similarity=0.422 Sum_probs=74.2
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecC-ceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSR-GMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~-~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
..++++|||+|+++ ..+.|++|||||.++ +.|+||++...
T Consensus 5 ~~~~~~G~L~K~g~-~~~~Wk~R~fvL~~~~~~L~yyk~~~~-------------------------------------- 45 (109)
T 2i5f_A 5 GVIIKQGCLLKQGH-RRKNWKVRKFILREDPAYLHYYDPAGA-------------------------------------- 45 (109)
T ss_dssp CCEEEEEEEEEECT-TTCCEEEEEEEEETTTTEEEEECTTSC--------------------------------------
T ss_pred CceeEEEEEEEcCC-CCCCceEEEEEEeCCCcEEEEECCCCC--------------------------------------
Confidence 46789999999954 567899999999975 48888876522
Q ss_pred cccccceeecccceeecCCCC-----CCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTSTIKVDADQ-----SDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 176 ~~~~~~~i~l~~~~v~~~~~~-----~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
..+.+.|+|..|+|....+. .+++|||.|.+++ ++|+|+|+|++|+++||.+|+.+|
T Consensus 46 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 46 -EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp -SSCSEEEECTTCEEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -CCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 12344577777766532221 1368999999997 679999999999999999999886
No 121
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.75 E-value=6.1e-19 Score=181.12 Aligned_cols=172 Identities=20% Similarity=0.227 Sum_probs=126.4
Q ss_pred ccceecccccccchhhhhhhcccccCccccccchhccch-------hhHHHHHhhhhcc-----ccCCCcccccccccCC
Q 006616 457 AHQIWEGVRTNDKKAVYRHIVNFEVDVNAVYEQVSCISS-------LTLAKAMLLNEQT-----SLERSSSSLTGNSSDR 524 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl~~gaDvN~~~~~~~~~~~-------~~l~~~ll~~~~~-----~~~~~~~~l~~~~~~~ 524 (638)
...|+.|+..|+.+ ++++|++.|+|+|..+..+.++.+ ..++++|+..+.. ..+.+++++++. ..
T Consensus 74 ~t~L~~A~~~g~~~-~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~--~~ 150 (299)
T 1s70_B 74 LTALHQACIDDNVD-MVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEE--EA 150 (299)
T ss_dssp CBHHHHHHHTTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCS--HH
T ss_pred CCHHHHHHHcCCHH-HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHh--cc
Confidence 35678888887765 567777999999998877744433 4666666654322 223344443332 22
Q ss_pred ccccc-ccccCC--------------------------CCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCC
Q 006616 525 SSSGS-LNLAGT--------------------------SEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDS 577 (638)
Q Consensus 525 ~~~~~-~lL~~~--------------------------~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~ 577 (638)
....+ .++... .......+..|.||||+|+..|+.+++++|+++|+++|.+|.
T Consensus 151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~ 230 (299)
T 1s70_B 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY 230 (299)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred hHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCC
Confidence 22111 112222 223334567899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHHcCCCcHHHHHHHh
Q 006616 578 RGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVESNFADSEVLAILS 634 (638)
Q Consensus 578 ~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~~d~eiv~lLl 634 (638)
.|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+... .++++.|+
T Consensus 231 ~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~---~~~l~~l~ 284 (299)
T 1s70_B 231 DGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI---LGYLEELQ 284 (299)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGG---GHHHHHHH
T ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHH---HHHHHHHH
Confidence 9999999999999999999999999999999999999999997654 34454444
No 122
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=6.3e-18 Score=146.78 Aligned_cols=99 Identities=28% Similarity=0.664 Sum_probs=77.5
Q ss_pred ceeEEEEEEeecCC---CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCC
Q 006616 98 QTIRQGYLSKRSSN---LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 174 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~---~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 174 (638)
.++++|||+|+++. ..+.|++|||||. ++.|+||+++..
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~------------------------------------- 43 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVS-RGLFYYYANEKS------------------------------------- 43 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEE-TTEEEEESSTTC-------------------------------------
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEe-CCEEEEecCCCC-------------------------------------
Confidence 36899999999753 2378999999998 677888876532
Q ss_pred ccccccceeecccceeecCC---CCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006616 175 EKSAARHTVNLLTSTIKVDA---DQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASL 236 (638)
Q Consensus 175 ~~~~~~~~i~l~~~~v~~~~---~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~~ 236 (638)
..+.+.|+|..+++...+ .+..++|||.|++++ ++|+|+|+|++|+++||.+|+.+|..+
T Consensus 44 --~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~l 107 (108)
T 1u5d_A 44 --KQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLLKDL 107 (108)
T ss_dssp --SSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 123445777777766532 334567999999998 999999999999999999999999753
No 123
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.75 E-value=8.3e-18 Score=147.63 Aligned_cols=95 Identities=23% Similarity=0.449 Sum_probs=70.8
Q ss_pred EEEEEEeecCC---CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 101 RQGYLSKRSSN---LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 101 k~GyL~Kr~~~---~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
|+|||.||.++ ..+.|++|||||. ++.||||+...+.
T Consensus 2 keG~L~kK~g~~~~~~k~Wk~rwfvL~-~~~L~~yk~~~~~--------------------------------------- 41 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHWKTCFVVLS-NGILYQYPDRTDV--------------------------------------- 41 (112)
T ss_dssp EEEEEEECCSCCCSSCCCCEEEEEEEE-TTEEEEESSSSCC---------------------------------------
T ss_pred ceEEEEEeCCCCCCCCCCceEEEEEEE-CCEEEEECCCCCC---------------------------------------
Confidence 79999987543 5679999999998 6788888765321
Q ss_pred cccceeecccceee--cCCCCCCCcceEEEecC-CeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 178 AARHTVNLLTSTIK--VDADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 178 ~~~~~i~l~~~~v~--~~~~~~~rr~cF~I~t~-~rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
.+...|+|..+.+. ...+...|+|||+|+++ .++|+|||+|++||++||.+|+.+|..
T Consensus 42 ~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 42 IPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp SCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 12234666543322 22345578899999965 579999999999999999999988753
No 124
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.75 E-value=3e-18 Score=171.77 Aligned_cols=117 Identities=23% Similarity=0.258 Sum_probs=104.4
Q ss_pred ccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHhCCHHHH
Q 006616 517 LTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATD-SRGLTPLHRCILRGKAMFA 595 (638)
Q Consensus 517 l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d-~~G~TpLh~A~~~g~~~~v 595 (638)
|+.+...+....+..|+. +++++..|..|+||||+||..|+.++|++|+++|+++|.+| ..|+||||+|+..|+.+++
T Consensus 49 L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v 127 (244)
T 3ui2_A 49 WWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVV 127 (244)
T ss_dssp HHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHH
Confidence 444455556666777777 99999999999999999999999999999999999999998 7899999999999999999
Q ss_pred HHHHhCCCCCCCccCCCCCHHHHHH----------------HcCCCcHHHHHHHhhC
Q 006616 596 KLLLTRGADPRAVNREGKTSLELAV----------------ESNFADSEVLAILSDS 636 (638)
Q Consensus 596 ~lLl~~gad~~~~d~~g~TpL~~A~----------------~~g~~d~eiv~lLle~ 636 (638)
++|+++|++++.+|..|.||||+|+ ..|+ .+++++|+++
T Consensus 128 ~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~--~~iv~~L~~~ 182 (244)
T 3ui2_A 128 EALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGL--EKVINVLEGQ 182 (244)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcCh--HHHHHHHHHh
Confidence 9999999999999999999999998 4565 7899999874
No 125
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=2e-18 Score=150.22 Aligned_cols=94 Identities=19% Similarity=0.374 Sum_probs=73.8
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
..++++|||+|+ ..+.|+||||||+ ++.|+||+.+...
T Consensus 6 ~~~~~~G~L~K~---~~k~Wk~RwfvL~-~~~L~yyk~~~~~-------------------------------------- 43 (107)
T 2cof_A 6 SGLETSSYLNVL---VNSQWKSRWCSVR-DNHLHFYQDRNRS-------------------------------------- 43 (107)
T ss_dssp CCCTTCCEEEEE---ETTEEEEEEEEEC-SSCEEEECSSTTC--------------------------------------
T ss_pred CCCcEeEEEEEe---cCCCcceEEEEEE-CCEEEEEeCCccc--------------------------------------
Confidence 345689999999 4678999999998 5577888765321
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEecC-CeeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~-~rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
..+...|.+..|.|.+.. +..++|||+|+++ .++|+|+|+|++|+++||.+|+.++
T Consensus 44 ~~~~~~i~l~~~~v~~~~-~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~ 100 (107)
T 2cof_A 44 KVAQQPLSLVGCEVVPDP-SPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSES 100 (107)
T ss_dssp SEEEEEECTTTCEEECCC-BTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHS
T ss_pred CCCeeEEeccceEEEECC-CCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 122345677788777643 3467899999999 7899999999999999999999775
No 126
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.74 E-value=2.3e-18 Score=173.01 Aligned_cols=129 Identities=18% Similarity=0.171 Sum_probs=107.5
Q ss_pred cCCCcccccccc-cCCcccccccccCCCCCCCc-----------CCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCC
Q 006616 510 LERSSSSLTGNS-SDRSSSGSLNLAGTSEGQTM-----------DDLEGCTLLHLACDSADIGMLELLLQYGANINATDS 577 (638)
Q Consensus 510 ~~~~~~~l~~~~-~~~~~~~~~lL~~~~~~~~~-----------~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~ 577 (638)
.+.+++++++.. ..+...++.+|+..|++++. .|..|.||||+|+..|+.+++++|+++|+++|.+|.
T Consensus 42 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 121 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRAC 121 (256)
T ss_dssp TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccc
Confidence 334444444433 12666777788888777663 346799999999999999999999999999999988
Q ss_pred C-------------CCcHHHHHHHhCCHHHHHHHHh---CCCCCCCccCCCCCHHHHHHHcCCCcHH-------HHHHHh
Q 006616 578 R-------------GLTPLHRCILRGKAMFAKLLLT---RGADPRAVNREGKTSLELAVESNFADSE-------VLAILS 634 (638)
Q Consensus 578 ~-------------G~TpLh~A~~~g~~~~v~lLl~---~gad~~~~d~~g~TpL~~A~~~g~~d~e-------iv~lLl 634 (638)
. |+||||+|+..|+.+++++|++ +|++++.+|..|.||||+|+..++...+ ++++|+
T Consensus 122 ~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll 201 (256)
T 2etb_A 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLL 201 (256)
T ss_dssp SGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHH
Confidence 6 9999999999999999999999 9999999999999999999994433377 999999
Q ss_pred hCCC
Q 006616 635 DSHG 638 (638)
Q Consensus 635 e~ga 638 (638)
++||
T Consensus 202 ~~ga 205 (256)
T 2etb_A 202 QMGA 205 (256)
T ss_dssp HHHH
T ss_pred HcCC
Confidence 8764
No 127
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.74 E-value=4.2e-18 Score=146.98 Aligned_cols=93 Identities=27% Similarity=0.496 Sum_probs=74.0
Q ss_pred EEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcccccc
Q 006616 101 RQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSAAR 180 (638)
Q Consensus 101 k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 180 (638)
++|||+|++ +..+.|++|||||. ++.|+||++..+. ...+.
T Consensus 1 ~eG~L~K~g-~~~k~Wk~R~fvL~-~~~L~Yy~~~~~~-------------------------------------~~~~~ 41 (103)
T 3rcp_A 1 MEGVLYKWT-NYLTGWQPRWFVLD-NGILSYYDSQDDV-------------------------------------CKGSK 41 (103)
T ss_dssp CEEEEEEEC-CTTTCEEEEEEEEE-TTEEEEESSCC----------------------------------------CCCS
T ss_pred CceEEEEcc-CCCCCeeceEEEEE-CCEEEEEecCCcc-------------------------------------cCCcc
Confidence 489999995 45779999999998 7889999876431 11234
Q ss_pred ceeecccceeecCCCCCCCcceEEEecC-CeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 181 HTVNLLTSTIKVDADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 181 ~~i~l~~~~v~~~~~~~~rr~cF~I~t~-~rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
+.|+|..|.|.+.++ ..++|.|+++ .++|+|+|+|++|+++||.+|+.++..
T Consensus 42 g~i~L~~~~v~~~~~---~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 42 GSIKMAVCEIKVHSA---DNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKAS 94 (103)
T ss_dssp CEEEGGGCEEECCTT---CSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred cEEEeeeeEEEEcCC---CCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 568888888876432 4789999998 699999999999999999999988754
No 128
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.74 E-value=6.7e-18 Score=150.05 Aligned_cols=94 Identities=22% Similarity=0.226 Sum_probs=89.0
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHHc
Q 006616 543 DLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVES 622 (638)
Q Consensus 543 d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~~ 622 (638)
+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHhhCCC
Q 006616 623 NFADSEVLAILSDSHG 638 (638)
Q Consensus 623 g~~d~eiv~lLle~ga 638 (638)
|+ .+++++|+++|+
T Consensus 84 ~~--~~~v~~Ll~~ga 97 (123)
T 3aaa_C 84 GH--VSCVKLLLSKGA 97 (123)
T ss_dssp TC--HHHHHHHHHTTC
T ss_pred CC--HHHHHHHHHcCC
Confidence 98 899999999885
No 129
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.74 E-value=5.3e-18 Score=151.81 Aligned_cols=102 Identities=20% Similarity=0.373 Sum_probs=73.5
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
..++++|||+|+++ ..+.|+||||||.+++.|+||+.....
T Consensus 6 ~~~~~~G~L~K~g~-~~k~WkkRwfvL~~~~~L~yy~~~~~~-------------------------------------- 46 (125)
T 1unq_A 6 VAIVKEGWLHKRGE-YIKTWRPRYFLLKNDGTFIGYKERPQD-------------------------------------- 46 (125)
T ss_dssp GCEEEEEEEEEECS-SSCCEEEEEEEEETTSEEEEESSCCCS--------------------------------------
T ss_pred CCeeEEeeEEeccC-CccCccCcEEEEecCCEEEEEeCCCCC--------------------------------------
Confidence 45789999999954 578999999999977888888765331
Q ss_pred ccccceeecccceeec---CCCCCCCcceEEEec----CCeeEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006616 177 SAARHTVNLLTSTIKV---DADQSDLRFCFRIIS----PTKNYTLQAESALDQMDWIEKITGVIASLLS 238 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~---~~~~~~rr~cF~I~t----~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~ 238 (638)
.+.+.|.|..+++.. ...+..++|||+|.+ +.++|+|+|+|++|+++||.+|+.+|.....
T Consensus 47 -~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 114 (125)
T 1unq_A 47 -VDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKK 114 (125)
T ss_dssp -HHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCceeEccceeEEeeeecccccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 111223333222210 011235689999995 4689999999999999999999999976543
No 130
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=2.1e-17 Score=147.11 Aligned_cols=98 Identities=23% Similarity=0.466 Sum_probs=75.7
Q ss_pred CcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 96 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
...++++|||+|+++...+.|+||||||. ++.|+||+....
T Consensus 19 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~-------------------------------------- 59 (122)
T 2yry_A 19 NAPVTKAGWLFKQASSGVKQWNKRWFVLV-DRCLFYYKDEKE-------------------------------------- 59 (122)
T ss_dssp TCCEEEEEEEEEECCSSSCCEEEEEEEEE-TTEEEEESSTTC--------------------------------------
T ss_pred CCCccEEEEEEEECCCCCCCcEEEEEEEe-CCEEEEECCCCC--------------------------------------
Confidence 34578999999997556789999999998 678888876532
Q ss_pred cccccceeecccceeecC--CCCCCCcceEEEecC-CeeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTSTIKVD--ADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 176 ~~~~~~~i~l~~~~v~~~--~~~~~rr~cF~I~t~-~rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
..+.+.|+|..++|... .+...++|||.|+++ .++|+|+|+|++|+++||.+|+.++
T Consensus 60 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 60 -ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp -CSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -CCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 12334567766665432 233467899999865 5999999999999999999999886
No 131
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.74 E-value=9.6e-18 Score=147.05 Aligned_cols=103 Identities=23% Similarity=0.373 Sum_probs=71.1
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCC-CCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCS-KSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~-~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
..++++|||+|+++ ..+.|+||||||+.++.|+||+++.. .+.|.+
T Consensus 3 ~~~~~~G~L~K~g~-~~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i-------------------------------- 49 (112)
T 3aj4_A 3 MAFVKSGWLLRQST-ILKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKV-------------------------------- 49 (112)
T ss_dssp CSCSEEEEEEEECS-SSCCEEEEEEEECTTSEEEEESSTTCCSEEEEE--------------------------------
T ss_pred cceeEEEEEEeeCC-CCCCeeceEEEEeeCCEEEEEcCCCCCCCCccc--------------------------------
Confidence 45689999999954 57899999999955888999887643 111100
Q ss_pred cccccceeecccc-eeec--CCCCCCCcceEEEecC-CeeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTS-TIKV--DADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 176 ~~~~~~~i~l~~~-~v~~--~~~~~~rr~cF~I~t~-~rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
......|+|... .+.. .++...++|||.|+++ .++|+|+|+|++|+++||.+|+.++
T Consensus 50 -~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 50 -HMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp -EHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -cccccceeecccccccccCCCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 111122333322 1221 1223344799999976 7999999999999999999999875
No 132
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=1.7e-17 Score=146.55 Aligned_cols=98 Identities=30% Similarity=0.552 Sum_probs=75.8
Q ss_pred CcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 96 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
...++++|||+|+++ ..+.|++|||||. ++.|+||+....
T Consensus 5 ~~~~~~~G~L~K~g~-~~~~Wk~R~fvL~-~~~L~yy~~~~~-------------------------------------- 44 (118)
T 1v89_A 5 SSGPIKMGWLKKQRS-IVKNWQQRYFVLR-AQQLYYYKDEED-------------------------------------- 44 (118)
T ss_dssp SSCEEEEEEEEEECS-SSSCEEEEEEEEE-TTEEEEESSSSC--------------------------------------
T ss_pred CCCCcEEEEEEecCC-CCCCccEEEEEEE-CCEEEEEeCCCC--------------------------------------
Confidence 346789999999954 5678999999999 567888876532
Q ss_pred cccccceeecccceeecCC--CCCCCcceEEEec--------CCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTSTIKVDA--DQSDLRFCFRIIS--------PTKNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 176 ~~~~~~~i~l~~~~v~~~~--~~~~rr~cF~I~t--------~~rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
..+.+.|+|..|++.... ....++|||+|++ +.++|+|+|+|++|+++||.+|+.+|.
T Consensus 45 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 45 -TKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp -CSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -CCceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 123345777777665322 2335689999998 679999999999999999999999986
No 133
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.74 E-value=1.3e-17 Score=149.77 Aligned_cols=99 Identities=22% Similarity=0.470 Sum_probs=77.6
Q ss_pred CcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 96 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
...++++|||+|+++...+.|+||||||. ++.|+||+.+..
T Consensus 18 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~-------------------------------------- 58 (128)
T 2dkp_A 18 NAPVVRRGWLYKQDSTGMKLWKKRWFVLS-DLCLFYYRDEKE-------------------------------------- 58 (128)
T ss_dssp TSCCCEEEEEEEECCSSSCCEEEEEEEEE-TTEEEEESSTTC--------------------------------------
T ss_pred CCCcEEEEEEEEeCCCCCCCceeEEEEEe-CCEEEEECCCCC--------------------------------------
Confidence 34568999999997646789999999998 678888876532
Q ss_pred cccccceeecccceeecCC--CCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTSTIKVDA--DQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 176 ~~~~~~~i~l~~~~v~~~~--~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
..+.+.|+|..+.|.... +...++|||+|++++ ++|+|+|+|++|+++||.+|+.++.
T Consensus 59 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 59 -EGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp -CSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred -cccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 123455777777766532 223678999999986 9999999999999999999998863
No 134
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.74 E-value=3.5e-18 Score=158.12 Aligned_cols=107 Identities=23% Similarity=0.261 Sum_probs=98.3
Q ss_pred ccccccc-CCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCC
Q 006616 527 SGSLNLA-GTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADP 605 (638)
Q Consensus 527 ~~~~lL~-~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~ 605 (638)
..+..|+ ..+.+++..|..|.||||+ |..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 16 ~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 94 (156)
T 1bd8_A 16 QEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV 94 (156)
T ss_dssp HHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 3333344 3456899999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHHHHcCCCcHHHHHHHhhC
Q 006616 606 RAVNREGKTSLELAVESNFADSEVLAILSDS 636 (638)
Q Consensus 606 ~~~d~~g~TpL~~A~~~g~~d~eiv~lLle~ 636 (638)
+.+|..|.||||+|+..|+ .+++++|+++
T Consensus 95 ~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~ 123 (156)
T 1bd8_A 95 NVPDGTGALPIHLAVQEGH--TAVVSFLAAE 123 (156)
T ss_dssp CCCCTTSCCHHHHHHHHTC--HHHHHHHHTT
T ss_pred CCcCCCCCcHHHHHHHhCh--HHHHHHHHhc
Confidence 9999999999999999998 8999999975
No 135
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.74 E-value=1.4e-17 Score=149.15 Aligned_cols=96 Identities=26% Similarity=0.518 Sum_probs=76.3
Q ss_pred ceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 98 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
.++|+|||+|+++ ..+.|+||||||. ++.|+||+++.. .
T Consensus 4 ~~~~~G~L~K~g~-~~~~Wk~R~fvL~-~~~L~yy~~~~~---------------------------------------~ 42 (127)
T 1fgy_A 4 NPDREGWLLKLGG-RVKTWKRRWFILT-DNCLYYFEYTTD---------------------------------------K 42 (127)
T ss_dssp SCSEEEEEEEECS-SSCCEEEEEEEEE-TTEEEEESSTTC---------------------------------------S
T ss_pred CCceEeEEEEECC-CCCCeEEEEEEEE-CCEEEEeCCCCC---------------------------------------C
Confidence 4679999999954 4678999999998 677888876532 1
Q ss_pred cccceeecccceeecCCCCCCCcceEEEecCC----------------------eeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 178 AARHTVNLLTSTIKVDADQSDLRFCFRIISPT----------------------KNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 178 ~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~----------------------rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
.+.+.|+|..+++... .+..+++||+|.+++ ++|+|+|+|++|+++||.+|+.+|..
T Consensus 43 ~~~g~i~L~~~~v~~~-~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 121 (127)
T 1fgy_A 43 EPRGIIPLENLSIREV-LDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 121 (127)
T ss_dssp SCSEEEECTTCEEEEE-CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CcceEEECCceEEEEc-cCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 2344577877777653 334778999999874 78999999999999999999999864
No 136
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.74 E-value=1.3e-17 Score=150.02 Aligned_cols=100 Identities=26% Similarity=0.422 Sum_probs=77.4
Q ss_pred CcceeEEEEEEeecCCCCCCceeeEEEEecC-ceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCC
Q 006616 96 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSR-GMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 174 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~-~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 174 (638)
...++++|||+|+++ ..+.|++|||||.++ +.|+||++...
T Consensus 15 ~~~~~~~G~L~K~g~-~~~~Wk~R~fvL~~~~~~L~yy~~~~~------------------------------------- 56 (129)
T 1x05_A 15 RGVIIKQGCLLKQGH-RRKNWKVRKFILREDPAYLHYYDPAGA------------------------------------- 56 (129)
T ss_dssp CSEEEEEEEEEECCS-SCCCCEEEEEEEEETTTEEEEECSSCC-------------------------------------
T ss_pred cCCceEEEEEEecCC-CCCCCeeEEEEEeCCCCEEEEECCCCC-------------------------------------
Confidence 456789999999954 577899999999975 48899876522
Q ss_pred ccccccceeecccceeecCCCC-----CCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 175 EKSAARHTVNLLTSTIKVDADQ-----SDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 175 ~~~~~~~~i~l~~~~v~~~~~~-----~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
..+.+.|+|..|++....+. .+++|||+|++++ ++|+|+|+|++|+++||.+|+.+|..
T Consensus 57 --~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 57 --EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp --SSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred --CcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 12345577877776542222 1368999999986 67999999999999999999998853
No 137
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.74 E-value=1.6e-17 Score=156.08 Aligned_cols=100 Identities=22% Similarity=0.379 Sum_probs=71.5
Q ss_pred cceeEEEEEEeecCCC----CCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCC
Q 006616 97 VQTIRQGYLSKRSSNL----RGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGV 172 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~----~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 172 (638)
..+++||||+||+.+. .++||||||||+ ++.|+||+++...
T Consensus 13 ~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~-~~~L~Yyk~~~~~---------------------------------- 57 (164)
T 2lul_A 13 FNTILEEILIKRSQQKKKTSPLNYKERLFVLT-KSMLTYYEGRAEK---------------------------------- 57 (164)
T ss_dssp SSEEEEEEEEEECCCCSSSCCCCEEEEEEEEE-SSEEEEECCCSSS----------------------------------
T ss_pred CCeeEEEEEEEecCCCCCCCCCCceeEEEEEE-CCEEEEEeccCcc----------------------------------
Confidence 4678999999997542 357999999998 5677788764321
Q ss_pred CCccccccceeecccce-eecC-----CCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 173 HDEKSAARHTVNLLTST-IKVD-----ADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 173 ~~~~~~~~~~i~l~~~~-v~~~-----~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
..+.+.|+|..+. |... .....+.+||+|++++|+|+|+|+|++|+++||++|+.+|..
T Consensus 58 ----~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~ 122 (164)
T 2lul_A 58 ----KYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKN 122 (164)
T ss_dssp ----CCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred ----cccccEEEEeeeEEEEeccccccCcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 1112234443322 1111 112346799999999999999999999999999999999863
No 138
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.74 E-value=1.1e-17 Score=147.64 Aligned_cols=97 Identities=21% Similarity=0.455 Sum_probs=72.8
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEec-CceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDS-RGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~-~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
..++++|||+|+++ ..+.|+||||||.. ++.|+||++...
T Consensus 6 ~~~~~~G~L~K~g~-~~~~Wk~R~fvL~~~~~~L~yy~~~~~-------------------------------------- 46 (117)
T 1v5u_A 6 SGRSYEGILYKKGA-FMKPWKARWFVLDKTKHQLRYYDHRMD-------------------------------------- 46 (117)
T ss_dssp CSSSEEEEEEECCC-SSSCCEEEEEEEETTTTEEEEESSSSC--------------------------------------
T ss_pred CCccEEEEEEecCC-CCCCceeeEEEEECCCCEEEEeecCCC--------------------------------------
Confidence 45679999999955 47799999999985 578888876532
Q ss_pred cccccceeecccceeecC-------CCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTSTIKVD-------ADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 176 ~~~~~~~i~l~~~~v~~~-------~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
..+.+.|+|..+.+... ++...++|||+|.++.++|+|+|+|++|+++||.+|+.+|
T Consensus 47 -~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i 110 (117)
T 1v5u_A 47 -TECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCL 110 (117)
T ss_dssp -SSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTC
T ss_pred -CccceEEEccCcEEEeecCccccccccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHHh
Confidence 11233455555443211 1224567999999999999999999999999999998765
No 139
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=2.8e-17 Score=144.86 Aligned_cols=95 Identities=17% Similarity=0.399 Sum_probs=73.6
Q ss_pred CcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 96 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
...++++|||+|+++...+.|+||||||. ++.|+||+.+..
T Consensus 5 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~-~~~L~yy~~~~~-------------------------------------- 45 (115)
T 2cod_A 5 SSGKVKSGWLDKLSPQGKRMFQKRWVKFD-GLSISYYNNEKE-------------------------------------- 45 (115)
T ss_dssp CSCCCEEEEEEECCSSSSSCCEEEEEEEC-SSEEEEEESSCC--------------------------------------
T ss_pred CCCccEEEEEEEcCCCCCCCCceEEEEEE-CCEEEEEcCCCC--------------------------------------
Confidence 34567999999996646789999999998 667888877543
Q ss_pred cccccceeecccce-eecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTST-IKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 176 ~~~~~~~i~l~~~~-v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
..+.+.|+|..++ |... + ++||.|++++++|+|+|+|++|+++||.+|+.++..
T Consensus 46 -~~~~g~i~l~~~~~v~~~----~-~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~~~ 100 (115)
T 2cod_A 46 -MYSKGIIPLSAISTVRVQ----G-DNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKS 100 (115)
T ss_dssp -SSCCCEEETTTEEEEEEE----T-TTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred -cccCCEEECCcceEEEeC----C-CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 1123346665543 3321 1 699999999999999999999999999999999854
No 140
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.73 E-value=1.4e-17 Score=147.40 Aligned_cols=97 Identities=18% Similarity=0.376 Sum_probs=74.9
Q ss_pred eeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcccc
Q 006616 99 TIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSA 178 (638)
Q Consensus 99 ~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (638)
++++|||+||+. ..++|++|||||..+ .|+||+..... ....
T Consensus 6 ~~k~G~L~Kk~~-~~k~W~~rwfVL~~~-~L~yyK~~~~~------------------------------------~d~~ 47 (120)
T 4a6h_A 6 EIKSGFLERRSK-FLKSYSKGYYVLTPN-FLHEFKTADRK------------------------------------KDLV 47 (120)
T ss_dssp CSEEEEEEEEET-TTTEEEEEEEEECSS-EEEEESSCCTT------------------------------------TCCS
T ss_pred ccEEEEEEEcCC-CCCCCccEEEEEeCC-EEEEEcCCCcC------------------------------------cCCC
Confidence 789999999965 578999999999966 78888765321 0123
Q ss_pred ccceeecccceeecCCCCCC--------CcceEEEecCC-------eeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 179 ARHTVNLLTSTIKVDADQSD--------LRFCFRIISPT-------KNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 179 ~~~~i~l~~~~v~~~~~~~~--------rr~cF~I~t~~-------rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
+.+.|.|..|+|....++.. +.++|.|..++ ++|+|+|+|.+||++||++|+.++
T Consensus 48 P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 48 PVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp CSEEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred ceEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 45678899999986433322 67889998765 599999999999999999999874
No 141
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.6e-17 Score=145.31 Aligned_cols=97 Identities=24% Similarity=0.468 Sum_probs=75.2
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
..++++|||+|+++...+.|+||||||. ++.|+||++...
T Consensus 9 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~--------------------------------------- 48 (117)
T 2d9y_A 9 APVTKAGWLFKQASSGVKQWNKRWFVLV-DRCLFYYKDEKE--------------------------------------- 48 (117)
T ss_dssp CCCCEEEEEEEECTTSSSCEEEEEEEEE-TTEEEEESSTTC---------------------------------------
T ss_pred CCeeEEEEEEEeCCCCCCCceEEEEEEC-CCEEEEECCCCC---------------------------------------
Confidence 4567999999997556789999999998 678888876532
Q ss_pred ccccceeecccceeecC--CCCCCCcceEEEecC-CeeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 177 SAARHTVNLLTSTIKVD--ADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~--~~~~~rr~cF~I~t~-~rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
..+.+.|+|..++|... .+...++|||.|+++ .++|+|+|+|++|+++||.+|+.++
T Consensus 49 ~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 108 (117)
T 2d9y_A 49 ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 108 (117)
T ss_dssp CSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred CCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 12344577777766432 233467899999765 5999999999999999999999876
No 142
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.73 E-value=1.1e-17 Score=149.54 Aligned_cols=102 Identities=17% Similarity=0.290 Sum_probs=75.4
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCC-----CCCCCCCCccccccCcCcccCCccccccccccCCC
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQC-----SKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGG 171 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~-----~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 171 (638)
..++|+|||+|+++ ..+.|++|||||.+ ..||||+... ..|.|
T Consensus 10 ~~~~k~G~L~K~g~-~~k~Wk~RwfVL~~-~~L~yyk~~~~~~~e~~plg------------------------------ 57 (124)
T 2w2x_D 10 DEHKQQGELYMWDS-IDQKWTRHFCAIAD-AKLSFSDDIEQTMEEDNPLG------------------------------ 57 (124)
T ss_dssp ---CCEEEEEEEET-TTTEEEEEEEEEET-TEEEEEEEHHHHHHCSSCCC------------------------------
T ss_pred hhcceeEEEEEECC-CCCCceEeEEEEEC-CEEEEEcccccccccccccC------------------------------
Confidence 45679999999954 56789999999994 5577776531 11111
Q ss_pred CCCccccccceeecccceeecCCCC-CCCcceEEEecCC---eeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 172 VHDEKSAARHTVNLLTSTIKVDADQ-SDLRFCFRIISPT---KNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 172 ~~~~~~~~~~~i~l~~~~v~~~~~~-~~rr~cF~I~t~~---rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
..+.+.|+|..|+|....++ ..++|||+|.+++ ++|+|+|+|++|+++||.||+.++..
T Consensus 58 -----~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 58 -----SLCRGILDLNTYNVVKAPQGKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp -----CSCSEEEEGGGEEEEECTTCBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred -----CccccEEECCCCEEEEccCCcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence 23456789999988764432 4578999999874 68999999999999999999998743
No 143
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.73 E-value=4.1e-18 Score=171.49 Aligned_cols=128 Identities=20% Similarity=0.164 Sum_probs=107.6
Q ss_pred CCCcccccccc-cCCcccccccccCCCC-----------CCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccC--
Q 006616 511 ERSSSSLTGNS-SDRSSSGSLNLAGTSE-----------GQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATD-- 576 (638)
Q Consensus 511 ~~~~~~l~~~~-~~~~~~~~~lL~~~~~-----------~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d-- 576 (638)
+.+++++++.. ..+...++.+|+..|+ +++..|..|+||||+||..|+.++|++|+++|+++|..+
T Consensus 46 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 125 (260)
T 3jxi_A 46 GKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARG 125 (260)
T ss_dssp CCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEE
T ss_pred CCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccc
Confidence 45555555432 5566677777777663 344556689999999999999999999999999999998
Q ss_pred ------------CCCCcHHHHHHHhCCHHHHHHHHh---CCCCCCCccCCCCCHHHHHHHcCCCc-------HHHHHHHh
Q 006616 577 ------------SRGLTPLHRCILRGKAMFAKLLLT---RGADPRAVNREGKTSLELAVESNFAD-------SEVLAILS 634 (638)
Q Consensus 577 ------------~~G~TpLh~A~~~g~~~~v~lLl~---~gad~~~~d~~g~TpL~~A~~~g~~d-------~eiv~lLl 634 (638)
..|+||||+|+..|+.++|++|++ +|++++.+|..|.||||+|+..++.. .+++++|+
T Consensus 126 ~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll 205 (260)
T 3jxi_A 126 RFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLL 205 (260)
T ss_dssp CCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHH
T ss_pred cccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHH
Confidence 689999999999999999999999 99999999999999999999887532 48999999
Q ss_pred hCCC
Q 006616 635 DSHG 638 (638)
Q Consensus 635 e~ga 638 (638)
++||
T Consensus 206 ~~ga 209 (260)
T 3jxi_A 206 IKCA 209 (260)
T ss_dssp HHHH
T ss_pred HhCc
Confidence 8764
No 144
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=1.5e-17 Score=145.10 Aligned_cols=93 Identities=28% Similarity=0.392 Sum_probs=86.0
Q ss_pred CCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHH
Q 006616 539 QTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLEL 618 (638)
Q Consensus 539 ~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~ 618 (638)
+...|.+|.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 34457789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCcHHHHHHH
Q 006616 619 AVESNFADSEVLAIL 633 (638)
Q Consensus 619 A~~~g~~d~eiv~lL 633 (638)
|+..|+ .+++++|
T Consensus 97 A~~~~~--~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGN--EDLAEIL 109 (110)
T ss_dssp HHHHTC--HHHHHHH
T ss_pred HHHcCC--HHHHHHh
Confidence 999998 8899987
No 145
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.72 E-value=1.9e-17 Score=153.12 Aligned_cols=104 Identities=23% Similarity=0.385 Sum_probs=80.0
Q ss_pred CcceeEEEEEEeecC-----CCCCCceeeEEEEecC--c--eEEEEecCCCCCCCCCCccccccCcCcccCCcccccccc
Q 006616 96 KVQTIRQGYLSKRSS-----NLRGDWKRRFFVLDSR--G--MLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSS 166 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~-----~~~~~WkrRwfvL~~~--~--~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~ 166 (638)
...++++|||+|++. ...+.|+||||||.++ | .|+||+....
T Consensus 15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~----------------------------- 65 (150)
T 1wg7_A 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKI----------------------------- 65 (150)
T ss_dssp SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCC-----------------------------
T ss_pred CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCC-----------------------------
Confidence 355789999999964 2457899999999864 2 7888876531
Q ss_pred ccCCCCCCccccccceeecccceeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006616 167 HYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASLLS 238 (638)
Q Consensus 167 ~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~~~~ 238 (638)
...+.+.|+|..|.+... ....++|||+|++++ ++|+|+|+|++|+++||.+|+.+|.....
T Consensus 66 ---------~~~~~g~I~L~~~~~~~~-~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~~~ 128 (150)
T 1wg7_A 66 ---------SKEPKGSIFLDSCMGVVQ-NNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFE 128 (150)
T ss_dssp ---------SSCCSEEECTTTCCEECC-CCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------CCCcCcEEecccCEEEec-CCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhhhH
Confidence 122345577877777753 334678999999996 89999999999999999999999975543
No 146
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.72 E-value=2.8e-17 Score=151.70 Aligned_cols=101 Identities=23% Similarity=0.544 Sum_probs=77.1
Q ss_pred cceeEEEEEEeecCC---CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCC
Q 006616 97 VQTIRQGYLSKRSSN---LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 173 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~---~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 173 (638)
..++|+|||+|+++. ..+.|+||||||+ ++.|+||+....
T Consensus 15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~-~~~L~yyk~~~~------------------------------------ 57 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALS-KTVFYYYGSDKD------------------------------------ 57 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEE-TTEEEEESSTTC------------------------------------
T ss_pred CCccEEEEEEEeCCCCCCcCCCceeEEEEEE-CCEEEEEcCCCC------------------------------------
Confidence 457899999999753 3479999999998 678888876532
Q ss_pred CccccccceeecccceeecCCC---CCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006616 174 DEKSAARHTVNLLTSTIKVDAD---QSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASLL 237 (638)
Q Consensus 174 ~~~~~~~~~i~l~~~~v~~~~~---~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~~~ 237 (638)
..+.+.|.|..+++...++ +..++|||.|++++ ++|+|+|+|++|+++||.+|+.+|....
T Consensus 58 ---~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~ 122 (148)
T 1u5f_A 58 ---KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDLG 122 (148)
T ss_dssp ---SSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC---
T ss_pred ---cccceEEEcCCcEEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHhc
Confidence 1234457777777764332 33557999999997 9999999999999999999999986543
No 147
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.72 E-value=2.5e-17 Score=148.17 Aligned_cols=99 Identities=28% Similarity=0.480 Sum_probs=74.2
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecC-ceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSR-GMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~-~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
..++++|||+|++. ..+.|+||||||..+ +.|+||+.+..
T Consensus 16 ~~~~~~G~L~K~g~-~~~~Wk~R~fvL~~d~~~L~yy~~~~~-------------------------------------- 56 (129)
T 1x1g_A 16 GTVVKQGYLAKQGH-KRKNWKVRRFVLRKDPAFLHYYDPSKE-------------------------------------- 56 (129)
T ss_dssp SEEEEEEEEEEECS-SSSSEEEEEEEEEESSCEEEEECSSSC--------------------------------------
T ss_pred CCEEEEEEEEEECC-CCCCeeeEEEEEeCCCCeEEEeCCCCc--------------------------------------
Confidence 46789999999954 478999999999964 78999987411
Q ss_pred cccccceeecccceeecCCCC--------CCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTSTIKVDADQ--------SDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 176 ~~~~~~~i~l~~~~v~~~~~~--------~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
...+.+.|+|..|.|....+. ..++|||.|++++ ++|+|+|+|++|+++||.+|+.+|.
T Consensus 57 ~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 57 ENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp CSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred CCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 012233466666655432211 1167999999997 6899999999999999999998874
No 148
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.71 E-value=2.3e-17 Score=142.96 Aligned_cols=98 Identities=19% Similarity=0.407 Sum_probs=72.4
Q ss_pred EEEEEEeecC-------CCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCC
Q 006616 101 RQGYLSKRSS-------NLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 173 (638)
Q Consensus 101 k~GyL~Kr~~-------~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 173 (638)
++|||+|++. ...+.|++|||||+ ++.|+||+.......+
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~-~~~L~yyk~~~~~~~~-------------------------------- 47 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVIN-NQEMGFYKDAKSAASG-------------------------------- 47 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEE-TTEEEEESSHHHHHHT--------------------------------
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEE-CCEEEEEeCCcccccC--------------------------------
Confidence 4899999961 35679999999998 6788888765320000
Q ss_pred CccccccceeecccceeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHH
Q 006616 174 DEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGV 232 (638)
Q Consensus 174 ~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~ 232 (638)
....+...|+|..+.+.+..+...++|||+|++++ ++|+|+|+|++|+.+||.+|+.|
T Consensus 48 -~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 48 -IPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp -CCSSSCCCEECTTCEEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred -CCCCCcceEECCCCEEEEcccccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 00112334777777766555556788999999876 99999999999999999999864
No 149
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.71 E-value=2.3e-17 Score=147.50 Aligned_cols=100 Identities=23% Similarity=0.484 Sum_probs=74.4
Q ss_pred CcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 96 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
...++++|||+|++ ...+.|+||||||. ++.|+||+....
T Consensus 11 ~~~~~~~G~L~K~g-~~~~~Wk~R~fvL~-~~~L~yy~~~~~-------------------------------------- 50 (125)
T 1eaz_A 11 DSAVIKAGYCVKQG-AVMKNWKRRYFQLD-ENTIGYFKSELE-------------------------------------- 50 (125)
T ss_dssp -CCCSEEEEEEEEC-TTTCCEEEEEEEEC-SSEEEEESSTTC--------------------------------------
T ss_pred CCCccEEEEEEEeC-CCCCCcceEEEEEe-CCEEEEEcCCCC--------------------------------------
Confidence 34568999999994 45778999999998 567888876532
Q ss_pred cccccceeecccce-eecCC--CCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTST-IKVDA--DQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASL 236 (638)
Q Consensus 176 ~~~~~~~i~l~~~~-v~~~~--~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~ 236 (638)
..+.+.|+|..+. |.... +...++|||+|++++++|+|+|+|++|+++||.+|+.+|...
T Consensus 51 -~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~~ 113 (125)
T 1eaz_A 51 -KEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ 113 (125)
T ss_dssp -SSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred -CcceeEEEcccceEEeeccccccCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 1123346665543 22111 123568999999999999999999999999999999999753
No 150
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.71 E-value=2.3e-17 Score=149.42 Aligned_cols=94 Identities=30% Similarity=0.347 Sum_probs=90.0
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHHc
Q 006616 543 DLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVES 622 (638)
Q Consensus 543 d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~~ 622 (638)
...|.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHhhCCC
Q 006616 623 NFADSEVLAILSDSHG 638 (638)
Q Consensus 623 g~~d~eiv~lLle~ga 638 (638)
|+ .+++++|+++|+
T Consensus 91 ~~--~~~v~~Ll~~g~ 104 (136)
T 2jab_A 91 GH--LEIAEVLLKHGA 104 (136)
T ss_dssp TC--HHHHHHHHHTTC
T ss_pred CC--HHHHHHHHHcCC
Confidence 98 899999999885
No 151
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.71 E-value=2.3e-17 Score=155.48 Aligned_cols=101 Identities=16% Similarity=0.315 Sum_probs=68.7
Q ss_pred ceeEEEEEEeecCC----CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCC
Q 006616 98 QTIRQGYLSKRSSN----LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 173 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~----~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 173 (638)
.++|+|||+||+.+ .+++||||||||+ +..|+||++..+..
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~-~~~L~Yyk~~~~~~---------------------------------- 46 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLT-VHKLSYYEYDFERG---------------------------------- 46 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEEC-SSEEEEEEEETTTT----------------------------------
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEc-CCEEEEEecCCccC----------------------------------
Confidence 35799999999643 2478999999998 56777777521100
Q ss_pred Cccccccceeecccce-eecC---CC-CCCC---------------------cceEEEecCCeeEEEEeCCHHHHHHHHH
Q 006616 174 DEKSAARHTVNLLTST-IKVD---AD-QSDL---------------------RFCFRIISPTKNYTLQAESALDQMDWIE 227 (638)
Q Consensus 174 ~~~~~~~~~i~l~~~~-v~~~---~~-~~~r---------------------r~cF~I~t~~rt~~lqA~se~e~~~Wi~ 227 (638)
....+.+.|.|..+. |... .+ ..++ +|||+|++++++|+|+|+|++|+++||+
T Consensus 47 -~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~ 125 (169)
T 1btk_A 47 -RRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIH 125 (169)
T ss_dssp -EEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHH
T ss_pred -CCCceeeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHH
Confidence 011223345554332 1111 00 1111 2999999999999999999999999999
Q ss_pred HHHHHHH
Q 006616 228 KITGVIA 234 (638)
Q Consensus 228 ai~~~i~ 234 (638)
+|+.+|.
T Consensus 126 aI~~~i~ 132 (169)
T 1btk_A 126 QLKNVIR 132 (169)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9999885
No 152
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.71 E-value=3.4e-17 Score=157.86 Aligned_cols=145 Identities=17% Similarity=0.147 Sum_probs=119.3
Q ss_pred chhhHHHHHhhhhccc----cCCCcccccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHH-Hc
Q 006616 494 SSLTLAKAMLLNEQTS----LERSSSSLTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLL-QY 568 (638)
Q Consensus 494 ~~~~l~~~ll~~~~~~----~~~~~~~l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll-~~ 568 (638)
.....++.++...... .....++++.+...+...++.+|+..|++++..|..|.||||+|+..|+.+++++|+ ..
T Consensus 16 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~ 95 (201)
T 3hra_A 16 RDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHA 95 (201)
T ss_dssp TCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred ccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 3445566665543311 112234455555566677888899999999999999999999999999999999999 56
Q ss_pred CCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCC-CCCCCccCCCCCHHHHHHHcCCCc---HHHHHHHhhCCC
Q 006616 569 GANINATDSRGLTPLHRCILRGKAMFAKLLLTRG-ADPRAVNREGKTSLELAVESNFAD---SEVLAILSDSHG 638 (638)
Q Consensus 569 gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~g-ad~~~~d~~g~TpL~~A~~~g~~d---~eiv~lLle~ga 638 (638)
+++++..|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..+... .+++++|+++|+
T Consensus 96 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga 169 (201)
T 3hra_A 96 TPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGA 169 (201)
T ss_dssp CCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTC
T ss_pred CcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCC
Confidence 7899999999999999999999999999999998 999999999999999999987421 799999999986
No 153
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.71 E-value=6.8e-18 Score=171.41 Aligned_cols=165 Identities=17% Similarity=0.174 Sum_probs=125.9
Q ss_pred ccceecccccccchhhhhhhc---ccccCccccccchhccchhhHHHHHhhhhccccCCCcccccccc-cCCcccccccc
Q 006616 457 AHQIWEGVRTNDKKAVYRHIV---NFEVDVNAVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNS-SDRSSSGSLNL 532 (638)
Q Consensus 457 ~~~L~~Av~~~d~~~v~~lLl---~~gaDvN~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~-~~~~~~~~~lL 532 (638)
...|+.|+..|+.+.|..+|. ..+++++..... .+..+.+++++++.. ..+...++.+|
T Consensus 14 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-----------------~~~~g~tpL~~A~~~~~~g~~~~v~~L 76 (273)
T 2pnn_A 14 RRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFK-----------------DPETGKTCLLKAMLNLHNGQNDTIALL 76 (273)
T ss_dssp HHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGS-----------------CTTTCCCHHHHHHHSCBTTBCHHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccc-----------------cCcCCCCHHHHHHHHHhcCChHHHHHH
Confidence 367899999999887765553 356666532100 011123444444432 23555566666
Q ss_pred cCCCCCC-----------CcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCC--------------CCCcHHHHHH
Q 006616 533 AGTSEGQ-----------TMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDS--------------RGLTPLHRCI 587 (638)
Q Consensus 533 ~~~~~~~-----------~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~--------------~G~TpLh~A~ 587 (638)
+..|+++ ...|..|.||||+|+..|+.++|++||++|++++.++. .|+||||+|+
T Consensus 77 l~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~ 156 (273)
T 2pnn_A 77 LDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAA 156 (273)
T ss_dssp HHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHH
T ss_pred HHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHH
Confidence 6665432 22567899999999999999999999999999999997 7999999999
Q ss_pred HhCCHHHHHHHHh---CCCCCCCccCCCCCHHHHHHHcCCCc-------HHHHHHHhhCCC
Q 006616 588 LRGKAMFAKLLLT---RGADPRAVNREGKTSLELAVESNFAD-------SEVLAILSDSHG 638 (638)
Q Consensus 588 ~~g~~~~v~lLl~---~gad~~~~d~~g~TpL~~A~~~g~~d-------~eiv~lLle~ga 638 (638)
..|+.+++++|++ +|++++.+|.+|.||||+|+..|+.. .+++++|+++|+
T Consensus 157 ~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga 217 (273)
T 2pnn_A 157 CTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGA 217 (273)
T ss_dssp HTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhh
Confidence 9999999999999 99999999999999999999988622 579999998763
No 154
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.70 E-value=5.9e-17 Score=158.30 Aligned_cols=99 Identities=22% Similarity=0.558 Sum_probs=77.5
Q ss_pred cceeEEEEEEeecCC---CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCC
Q 006616 97 VQTIRQGYLSKRSSN---LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 173 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~---~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 173 (638)
..++|+|||+|+++. ..+.|+||||||+ ++.|+||+....
T Consensus 104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~-~~~L~Yyk~~~~------------------------------------ 146 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALS-KTVFYYYGSDKD------------------------------------ 146 (211)
T ss_dssp SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEE-TTEEEEESSTTC------------------------------------
T ss_pred CCccEEEEEEEECCCCCcCCCCcEeEEEEEE-CCEEEEEcCCCC------------------------------------
Confidence 458999999999653 4679999999998 678888876533
Q ss_pred CccccccceeecccceeecCC---CCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 174 DEKSAARHTVNLLTSTIKVDA---DQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 174 ~~~~~~~~~i~l~~~~v~~~~---~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
..+.+.|.|..+++...+ .+..++|||.|++++ |+|+|+|+|++|+++||.+|+.+|..
T Consensus 147 ---~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 147 ---KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp ---SSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred ---ccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 123345777776665432 233557999999996 99999999999999999999999864
No 155
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.70 E-value=6.9e-17 Score=140.00 Aligned_cols=93 Identities=15% Similarity=0.279 Sum_probs=68.7
Q ss_pred eeEEEEEEeecCCCCC-CceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 99 TIRQGYLSKRSSNLRG-DWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 99 ~~k~GyL~Kr~~~~~~-~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
++|+|||+|+.++..+ +||+|||||. +..||||+...+ .
T Consensus 12 VirkGWL~k~~~g~~k~~wk~rWFVLt-~~~L~yyKd~~e---------------------------------------k 51 (125)
T 1dyn_A 12 VIRKGWLTINNIGIMKGGSKEYWFVLT-AENLSWYKDDEE---------------------------------------K 51 (125)
T ss_dssp EEEEEEEEESCCCGGGTSSEEEEEEEE-SSEEEEESSTTC---------------------------------------S
T ss_pred eEEEEEEEEecCccccCCceeeEEEEe-ccceeeecCCcc---------------------------------------c
Confidence 7999999997566565 5999999999 556666665433 1
Q ss_pred cccceeecccceeecCCC-CCCCcceEEEecCC--------eeEEEEeCCHHHHHHHHHHHHH
Q 006616 178 AARHTVNLLTSTIKVDAD-QSDLRFCFRIISPT--------KNYTLQAESALDQMDWIEKITG 231 (638)
Q Consensus 178 ~~~~~i~l~~~~v~~~~~-~~~rr~cF~I~t~~--------rt~~lqA~se~e~~~Wi~ai~~ 231 (638)
-+.+.|.|....|+...+ ...++|||+|.+++ ++|.|.|+|.+|+++||++|..
T Consensus 52 e~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~r 114 (125)
T 1dyn_A 52 EKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLR 114 (125)
T ss_dssp CEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHH
T ss_pred ccceEEECCCceEeccCCCCCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHh
Confidence 233446666666664222 12678999999875 4899999999999999999944
No 156
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.70 E-value=2.9e-17 Score=148.81 Aligned_cols=101 Identities=23% Similarity=0.424 Sum_probs=74.8
Q ss_pred ceeEEEEEEee--cCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 98 QTIRQGYLSKR--SSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 98 ~~~k~GyL~Kr--~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
.++++|||+|+ ++ ..+.|+||||||. ++.|+||+.+.+ +.
T Consensus 4 ~v~~~G~L~K~~~~~-~~~~WkrRwfvL~-~~~L~yyk~~~d------------------------------------~~ 45 (134)
T 2y7b_A 4 SVEERGFLTIFEDVS-GFGAWHRRWCVLS-GNCISYWTYPDD------------------------------------EK 45 (134)
T ss_dssp CCCEEEEEEEEEEET-TEEEEEEEEEEEE-TTEEEEESSHHH------------------------------------HT
T ss_pred CceEEeeEEEEcCCC-CCCCcEEEEEEEE-CCEEEEECCCCc------------------------------------cc
Confidence 46799999998 43 4578999999998 568888875421 01
Q ss_pred cccccceeecccce---eecCCCC-CCCcceEEEec--CC------------------eeEEEEeCCHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTST---IKVDADQ-SDLRFCFRIIS--PT------------------KNYTLQAESALDQMDWIEKITG 231 (638)
Q Consensus 176 ~~~~~~~i~l~~~~---v~~~~~~-~~rr~cF~I~t--~~------------------rt~~lqA~se~e~~~Wi~ai~~ 231 (638)
...+.+.|+|..|+ |...+.+ ..++|||+|.+ |. ++|+|+|+|++|+++||.+|+.
T Consensus 46 ~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~ 125 (134)
T 2y7b_A 46 RKNPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQ 125 (134)
T ss_dssp TSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred ccCceEEEEhhhCccccccccchhhccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHH
Confidence 12344568887776 4432221 35789999997 43 4799999999999999999999
Q ss_pred HHHHH
Q 006616 232 VIASL 236 (638)
Q Consensus 232 ~i~~~ 236 (638)
+|..+
T Consensus 126 ~i~~~ 130 (134)
T 2y7b_A 126 VLVDI 130 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99754
No 157
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.69 E-value=1.3e-16 Score=141.24 Aligned_cols=92 Identities=39% Similarity=0.594 Sum_probs=89.2
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHHHHHHcCC
Q 006616 545 EGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLELAVESNF 624 (638)
Q Consensus 545 ~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~~A~~~g~ 624 (638)
+|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcHHHHHHHhhCCC
Q 006616 625 ADSEVLAILSDSHG 638 (638)
Q Consensus 625 ~d~eiv~lLle~ga 638 (638)
.+++++|+++|+
T Consensus 81 --~~~~~~Ll~~g~ 92 (126)
T 1n0r_A 81 --LEVVKLLLEAGA 92 (126)
T ss_dssp --HHHHHHHHHTTC
T ss_pred --HHHHHHHHHcCC
Confidence 899999999875
No 158
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.69 E-value=1.1e-16 Score=158.76 Aligned_cols=106 Identities=18% Similarity=0.222 Sum_probs=92.7
Q ss_pred cccCCCCCCCcC---CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCC
Q 006616 531 NLAGTSEGQTMD---DLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRA 607 (638)
Q Consensus 531 lL~~~~~~~~~~---d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~ 607 (638)
.|+..+++++.. +..|.||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 3 ~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~ 82 (229)
T 2vge_A 3 SVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNS 82 (229)
T ss_dssp -------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred ehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 355566666544 44577889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 608 VNREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 608 ~d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 83 ~d~~g~tpLh~A~~~g~--~~~v~~Ll~~ga 111 (229)
T 2vge_A 83 PDSHGWTPLHCAASCND--TVICMALVQHGA 111 (229)
T ss_dssp CCTTCCCHHHHHHHTTC--HHHHHHHHTTTC
T ss_pred CCCCCCCHHHHHHHcCC--HHHHHHHHHcCC
Confidence 99999999999999998 999999999885
No 159
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.69 E-value=2e-17 Score=157.83 Aligned_cols=93 Identities=29% Similarity=0.247 Sum_probs=89.2
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCcc-CCCCCHHHHHHH
Q 006616 543 DLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVN-REGKTSLELAVE 621 (638)
Q Consensus 543 d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d-~~g~TpL~~A~~ 621 (638)
+..|.||||+|+..|+.+++++|++ |+++|.+|..|+||||+|+..|+.+++++|+++|++++.+| ..|.||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4578999999999999999999999 99999999999999999999999999999999999999998 899999999999
Q ss_pred cCCCcHHHHHHHhhCCC
Q 006616 622 SNFADSEVLAILSDSHG 638 (638)
Q Consensus 622 ~g~~d~eiv~lLle~ga 638 (638)
.|+ .+++++|+++|+
T Consensus 120 ~~~--~~~v~~Ll~~ga 134 (183)
T 3deo_A 120 YVR--PEVVEALVELGA 134 (183)
T ss_dssp TTC--HHHHHHHHHHTC
T ss_pred cCc--HHHHHHHHHcCC
Confidence 998 899999999875
No 160
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.68 E-value=8.6e-17 Score=151.75 Aligned_cols=98 Identities=20% Similarity=0.418 Sum_probs=68.1
Q ss_pred eeEEEEEEee---------cCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccC
Q 006616 99 TIRQGYLSKR---------SSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYH 169 (638)
Q Consensus 99 ~~k~GyL~Kr---------~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 169 (638)
++|+|||+|+ .+...+.|++|||||+ ++.|+||+......
T Consensus 3 v~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~-~~~L~yyk~~~~~~------------------------------ 51 (168)
T 2j59_M 3 AAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLR-GHSLYLYKDKREQT------------------------------ 51 (168)
T ss_dssp CCEEEEEEEEECC------------CCEEEEEEEE-TTEEEEESCTTCC-------------------------------
T ss_pred CcEEEEEeeeeecccCCcccCCCCCCceEEEEEEe-CCEEEEEECCcccc------------------------------
Confidence 5699999943 2345678999999998 67788887653210
Q ss_pred CCCCCccccccce--eecccceeecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 170 GGVHDEKSAARHT--VNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 170 ~~~~~~~~~~~~~--i~l~~~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
..+.+. |++..|.+.+..++..++|||+|++++++|+|+|+|++|+++||.+|+.++.
T Consensus 52 -------~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 52 -------TPSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp --------------CEECSSCEEEECSSSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred -------cccCCceEecccceEEEeccccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 001112 3344465554445557889999999999999999999999999999998863
No 161
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.67 E-value=9e-17 Score=157.99 Aligned_cols=95 Identities=20% Similarity=0.255 Sum_probs=91.4
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhC-CCCCCCccCCCCCHHHHHH
Q 006616 542 DDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTR-GADPRAVNREGKTSLELAV 620 (638)
Q Consensus 542 ~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~-gad~~~~d~~g~TpL~~A~ 620 (638)
.+..|.||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+.++|++|+++ |++++.+|..|.||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 356799999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HcCCCcHHHHHHHhhCCC
Q 006616 621 ESNFADSEVLAILSDSHG 638 (638)
Q Consensus 621 ~~g~~d~eiv~lLle~ga 638 (638)
..|+ .++|++|+++||
T Consensus 149 ~~~~--~~~v~~Ll~~ga 164 (222)
T 3ehr_A 149 WKGY--ADIVQLLLAKGA 164 (222)
T ss_dssp HHTC--HHHHHHHHHHTC
T ss_pred HcCC--HHHHHHHHHcCC
Confidence 9998 899999999885
No 162
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.66 E-value=2.3e-17 Score=158.36 Aligned_cols=100 Identities=16% Similarity=0.176 Sum_probs=88.4
Q ss_pred CCcCC-CCCCcHHHHHHHhCCH----HHHHHHHHcCCCCcccCCCCCcHHHHHHHhCC------HHHHHHHHhCCCCCCC
Q 006616 539 QTMDD-LEGCTLLHLACDSADI----GMLELLLQYGANINATDSRGLTPLHRCILRGK------AMFAKLLLTRGADPRA 607 (638)
Q Consensus 539 ~~~~d-~~G~TpLh~Aa~~g~~----~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~------~~~v~lLl~~gad~~~ 607 (638)
++..+ ..|+||||+|+..|+. +++++||++|+++|.+|..|+||||+|+..++ .+++++||++||+++.
T Consensus 30 ~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~ 109 (186)
T 3t8k_A 30 YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITA 109 (186)
T ss_dssp SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS
T ss_pred cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc
Confidence 34444 6799999999999975 59999999999999999999999999999987 6889999999999999
Q ss_pred ccCCCC-CHHHHHHHcCCCc---HHHHHHHhh-CCC
Q 006616 608 VNREGK-TSLELAVESNFAD---SEVLAILSD-SHG 638 (638)
Q Consensus 608 ~d~~g~-TpL~~A~~~g~~d---~eiv~lLle-~ga 638 (638)
+|..|. ||||+|+..+..+ .+++++|++ +||
T Consensus 110 ~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ga 145 (186)
T 3t8k_A 110 LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL 145 (186)
T ss_dssp CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTC
T ss_pred cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCC
Confidence 999999 9999999966422 469999999 775
No 163
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.66 E-value=1.5e-16 Score=141.85 Aligned_cols=104 Identities=14% Similarity=0.344 Sum_probs=75.1
Q ss_pred ceeEEEEEEeecC----C---CCCCceeeEEEEecCceEEEEecCCCC-CCCCCCccccccCcCcccCCccccccccccC
Q 006616 98 QTIRQGYLSKRSS----N---LRGDWKRRFFVLDSRGMLYYYRKQCSK-SSGSGSQLSSQRNSSELGSGLLSRWLSSHYH 169 (638)
Q Consensus 98 ~~~k~GyL~Kr~~----~---~~~~WkrRwfvL~~~~~l~y~~~~~~~-~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 169 (638)
.+.|+|||.|+.. + .++.|++|||||+ ++.|+||+.+... +.+.
T Consensus 7 ~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~-~~~L~~yk~~~~~~~~~~--------------------------- 58 (122)
T 1dro_A 7 GEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAK-AGRISFYKDQKGYKSNPE--------------------------- 58 (122)
T ss_dssp SSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEES-SSCCBEESSSSHHHHCTT---------------------------
T ss_pred ceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEE-CCEEEEEeCCcccccCCC---------------------------
Confidence 3569999998742 1 3578999999998 4566667665321 1000
Q ss_pred CCCCCccccccceeecccceeecCCCCCCCcceEEEec-CCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 170 GGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIIS-PTKNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 170 ~~~~~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t-~~rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
....+...|+|..|.+.+..+...|+|||+|++ +.++|+|||+|++||++||.+|+.+|.
T Consensus 59 -----~~~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~ 119 (122)
T 1dro_A 59 -----LTFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSD 119 (122)
T ss_dssp -----CCSSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred -----cccCCCceEECCCCEEEeCCCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 000112457788887776555557899999997 458999999999999999999999885
No 164
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.66 E-value=6.7e-17 Score=161.86 Aligned_cols=92 Identities=29% Similarity=0.260 Sum_probs=88.7
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCcc-CCCCCHHHHHHHc
Q 006616 544 LEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGADPRAVN-REGKTSLELAVES 622 (638)
Q Consensus 544 ~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d-~~g~TpL~~A~~~ 622 (638)
..|.||||+||..|+.+++++|++ |+++|.+|..|+||||+|+..|+.++|++|+++|++++.++ ..|.||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 468999999999999999999999 99999999999999999999999999999999999999998 8899999999999
Q ss_pred CCCcHHHHHHHhhCCC
Q 006616 623 NFADSEVLAILSDSHG 638 (638)
Q Consensus 623 g~~d~eiv~lLle~ga 638 (638)
|+ .++|++|+++|+
T Consensus 122 g~--~~~v~~Ll~~ga 135 (244)
T 3ui2_A 122 VR--PEVVEALVELGA 135 (244)
T ss_dssp TC--HHHHHHHHHTTC
T ss_pred CC--HHHHHHHHHCCC
Confidence 98 899999999986
No 165
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.65 E-value=6.9e-16 Score=155.63 Aligned_cols=108 Identities=23% Similarity=0.390 Sum_probs=79.6
Q ss_pred cceeEEEEEE-------eecCCC----CCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccc
Q 006616 97 VQTIRQGYLS-------KRSSNL----RGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLS 165 (638)
Q Consensus 97 ~~~~k~GyL~-------Kr~~~~----~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~ 165 (638)
..++|+|||+ ++.+.. ++.|++|||||++ +.|+||+.+.....
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~-~~L~yyK~~~~~~~------------------------- 62 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKG-CTLLFYETYGKNST------------------------- 62 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEET-TEEEEESSCCC----------------------------
T ss_pred CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcC-CEEEEEecCccccc-------------------------
Confidence 4578999999 233444 7899999999984 57777776421000
Q ss_pred cccCCCCCCccccccceeecccceeecCCCCCCCcceEEEec-CCeeEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006616 166 SHYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIIS-PTKNYTLQAESALDQMDWIEKITGVIASLLS 238 (638)
Q Consensus 166 ~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t-~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~ 238 (638)
+....+.+.|+|..|.+....+...++|||+|++ +.++|+|||+|++|+++||.+|+.++.....
T Consensus 63 --------~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~~ 128 (263)
T 3a8p_A 63 --------EQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLFA 128 (263)
T ss_dssp -----------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred --------ccccCccceEEcCCcEEEECCcCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhccc
Confidence 0112345568888888875455556899999999 4689999999999999999999999987653
No 166
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=135.62 Aligned_cols=110 Identities=20% Similarity=0.318 Sum_probs=76.0
Q ss_pred cceeEEEEEEeec-----CC-CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCC
Q 006616 97 VQTIRQGYLSKRS-----SN-LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHG 170 (638)
Q Consensus 97 ~~~~k~GyL~Kr~-----~~-~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 170 (638)
..+.|+|||+++. .. ..+.|++|||||+ ++.|+||+.......+.. + .
T Consensus 6 ~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~-~~~L~~yKd~~~~~~~~~-------------------~-----~- 59 (124)
T 3pp2_A 6 KTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLE-GGVLTFFKDSKTSAAGGL-------------------R-----Q- 59 (124)
T ss_dssp ---CEEEEEEEEEEEETTEECSSCCCEEEEEEEE-TTEEEEESCSBCC---CB-------------------C-----C-
T ss_pred CcEEEEEEEEEEEeccCCccCCCCCceEEEEEEE-CCEEEEEecCccccccCc-------------------c-----C-
Confidence 3467999999762 12 2358999999998 567777765433111100 0 0
Q ss_pred CCCCccccccceeecccceeecCC-CCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 171 GVHDEKSAARHTVNLLTSTIKVDA-DQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 171 ~~~~~~~~~~~~i~l~~~~v~~~~-~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
. .....+...|+|..|.+...+ +...|+|+|+|.+++ ++|.|||+|++||.+||.+|+.+|.
T Consensus 60 ~--~~~~~~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 60 P--SKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp G--GGGCSEEEEEECTTCEEEECCGGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred c--ccccCCcceEEcCCCEEEecccccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 0 000124456889888888754 556789999999876 7999999999999999999999984
No 167
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.61 E-value=5.8e-16 Score=130.41 Aligned_cols=87 Identities=32% Similarity=0.395 Sum_probs=79.2
Q ss_pred cccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHH
Q 006616 518 TGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKL 597 (638)
Q Consensus 518 ~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~l 597 (638)
+.+...+....+.+|+..|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 7 ~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ 86 (93)
T 1n0q_A 7 HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 86 (93)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 33344455667778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCC
Q 006616 598 LLTRGAD 604 (638)
Q Consensus 598 Ll~~gad 604 (638)
|+++||+
T Consensus 87 Ll~~ga~ 93 (93)
T 1n0q_A 87 LLEAGAY 93 (93)
T ss_dssp HHHTTCC
T ss_pred HHHcCCC
Confidence 9999985
No 168
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.61 E-value=1.4e-15 Score=150.56 Aligned_cols=97 Identities=26% Similarity=0.520 Sum_probs=77.4
Q ss_pred CcceeEEEEEEeecCCC----CCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCC
Q 006616 96 KVQTIRQGYLSKRSSNL----RGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGG 171 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~----~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 171 (638)
...++++|||+|+++.. ++.|+||||||. ++.|+||++...
T Consensus 55 ~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~-~~~L~Yyk~~~~---------------------------------- 99 (228)
T 3tfm_A 55 KQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLR-QSKLMYFENDSE---------------------------------- 99 (228)
T ss_dssp CCCSSEEEEEEECGGGCSSSCGGGCEEEEEEEC-SSEEEEESSTTC----------------------------------
T ss_pred CCCcceEEEEEEECCCcCCcccCCceEEEEEEe-CCEEEEEeCCCC----------------------------------
Confidence 34578999999996542 378999999998 678888877532
Q ss_pred CCCccccccceeecccceeecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 172 VHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 172 ~~~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
..+.+.|+|..|++..+ ..+++|||+|++++++|+|+|+|++|+++||.+|+.+|.
T Consensus 100 -----~~~~g~I~L~~~~~v~~--~~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 100 -----EKLKGTVEVRSAKEIID--NTNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp -----CSEEEEEEGGGCSEEEE--ETTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred -----cceeEEEEcCCCEEecc--CCCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 23445677877765432 225789999999999999999999999999999999986
No 169
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.60 E-value=1.4e-15 Score=153.24 Aligned_cols=101 Identities=22% Similarity=0.370 Sum_probs=73.6
Q ss_pred CcceeEEEEEEeecCCCCCCceeeEEEEecCc------eEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccC
Q 006616 96 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRG------MLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYH 169 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~------~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 169 (638)
...++|+|||+|+ +.||||||||++++ .|+||+++.+...
T Consensus 7 ~~~v~k~G~L~K~-----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~----------------------------- 52 (264)
T 1qqg_A 7 FSDVRKVGYLRKP-----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRH----------------------------- 52 (264)
T ss_dssp --CEEEEEEEECT-----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHT-----------------------------
T ss_pred CCCccEEEEEEEC-----CCCEeEEEEEECCCCCCCCCEEEEECCCccccc-----------------------------
Confidence 4567899999998 68999999999762 8999876532000
Q ss_pred CCCCCccccccceeecccce-eecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006616 170 GGVHDEKSAARHTVNLLTST-IKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASL 236 (638)
Q Consensus 170 ~~~~~~~~~~~~~i~l~~~~-v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~ 236 (638)
....+.+.|+|..|. |.... +..++|||.|++++|+|+|+|+|++|+++||.+|+.++...
T Consensus 53 -----~~~~p~g~I~L~~~~~V~~~~-~~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 53 -----KSSAPKRSIPLESCFNINKRA-DSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp -----TCSCCSEEEEGGGEEEEEEEC-CSSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred -----cccCcceEEEeeceEEEEecc-CCCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 001234557777665 43322 34678999999999999999999999999999999988653
No 170
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.60 E-value=3.3e-16 Score=137.20 Aligned_cols=100 Identities=27% Similarity=0.341 Sum_probs=89.1
Q ss_pred ccccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHH
Q 006616 517 LTGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAK 596 (638)
Q Consensus 517 l~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~ 596 (638)
++.+...+....+..|+..|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 13 L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~ 92 (115)
T 2l6b_A 13 LHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVK 92 (115)
T ss_dssp HHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHH
Confidence 33344445566777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCccCCCCCHH
Q 006616 597 LLLTRGADPRAVNREGKTSL 616 (638)
Q Consensus 597 lLl~~gad~~~~d~~g~TpL 616 (638)
+|+++|++++.++..|.||-
T Consensus 93 ~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 93 LLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHTTSSSHHHHSCCCC---
T ss_pred HHHHcCCCCCcCCccccccc
Confidence 99999999999999999884
No 171
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.59 E-value=3.8e-15 Score=156.64 Aligned_cols=95 Identities=26% Similarity=0.542 Sum_probs=76.6
Q ss_pred ceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 98 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
.++++|||+|+++ ..+.|+||||||. ++.|+||+.+.+ .
T Consensus 212 ~~~k~G~L~K~g~-~~k~WkkRwFVL~-~~~L~Yyk~~~~---------------------------------------~ 250 (347)
T 2r09_A 212 NPDREGWLLKLGG-RVKTWKRRWFILT-DNCLYYFEYTTD---------------------------------------K 250 (347)
T ss_dssp CCCEEEEEEEECS-SSCCEEEEEEEEE-TTEEEEESSTTC---------------------------------------S
T ss_pred ccccCCeeEecCC-CcccceeEEEEEc-CCEEEEEcCCCc---------------------------------------c
Confidence 3689999999955 4679999999998 678888876532 1
Q ss_pred cccceeecccceeecCCCCCCCcceEEEecC----------------------CeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 178 AARHTVNLLTSTIKVDADQSDLRFCFRIISP----------------------TKNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 178 ~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~----------------------~rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
.+.+.|.|..|+|... ++..++|||+|.++ .++|+|+|+|++|+++||.+|+.+|.
T Consensus 251 ~p~G~I~L~~~~v~~~-~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 251 EPRGIIPLENLSIREV-EDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp SCSEEEECTTCEEEEE-CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCeEEEEc-cCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 2345578888877753 34478999999987 37999999999999999999999885
No 172
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.59 E-value=5e-15 Score=157.67 Aligned_cols=98 Identities=16% Similarity=0.410 Sum_probs=71.8
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCC-CCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCS-KSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~-~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
..++|+|||.|+++...+.||||||||+ ++.|+||+++.+ .+.|
T Consensus 267 ~~~~k~G~L~K~g~~~~k~WKkRwFVL~-~~~L~YYk~~~d~~~~G---------------------------------- 311 (386)
T 3lju_X 267 RNYLKEGYMEKTGPKQTEGFRKRWFTMD-DRRLMYFKDPLDAFARG---------------------------------- 311 (386)
T ss_dssp CCCSEEEEEEECCTTSCSCCEEEEEEEE-TTEEEEESSTTCSBCSE----------------------------------
T ss_pred cccceeeeEEEECCCCCCCCcccEEEEE-CCEEEEEecCCCcccce----------------------------------
Confidence 4568999999996665589999999999 778888877543 2222
Q ss_pred cccccceeeccccee----ec-CCCCC-C--CcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTSTI----KV-DADQS-D--LRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 176 ~~~~~~~i~l~~~~v----~~-~~~~~-~--rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
.|.|..+.. .. .+... + ++|||+|++++|+|+|+|+|++|+++||.||+.+|..
T Consensus 312 ------~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 312 ------EVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp ------EEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred ------EEEeecceeeeeecccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 333322211 11 11111 1 2699999999999999999999999999999999863
No 173
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.58 E-value=1.8e-14 Score=127.37 Aligned_cols=103 Identities=19% Similarity=0.386 Sum_probs=76.2
Q ss_pred eEEEEEEee-----cCC-CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCC
Q 006616 100 IRQGYLSKR-----SSN-LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 173 (638)
Q Consensus 100 ~k~GyL~Kr-----~~~-~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 173 (638)
.++|||.++ ++. .+++|+||||+|. +..||||..+.-. +. .-.
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~-g~~L~yf~~~~~~--~~----------------------------~~~ 50 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLS-GATLLYYGAKSLR--GT----------------------------DRK 50 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEE-TTEEEEEEBSSSC--CS----------------------------SGG
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEe-CCEEEEEcccccc--cc----------------------------ccc
Confidence 368888853 443 3689999999999 5567777754211 00 000
Q ss_pred CccccccceeecccceeecCCCCCCCcceEEEecC--CeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 174 DEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISP--TKNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 174 ~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~--~rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
+.+..+...|.|..+.|. ..++..+++||+|.++ +.+|.|||+|++++.+||++|..+|.
T Consensus 51 ~~~~~P~~~i~L~g~~V~-~~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 51 HYKSTPGKKVSIVGWMVQ-LPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp GBCSSCSEEEECTTCEEE-CCCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ccccCCCceEEeCCCEEE-ecCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 222345667899999998 4677778999999987 47899999999999999999999875
No 174
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.56 E-value=8.1e-17 Score=171.59 Aligned_cols=115 Identities=13% Similarity=0.107 Sum_probs=77.0
Q ss_pred cccCCcccccccccCCCCCC---CcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCC---cccCCCCCcHHHHHHHhCCHH
Q 006616 520 NSSDRSSSGSLNLAGTSEGQ---TMDDLEGCTLLHLACDSADIGMLELLLQYGANI---NATDSRGLTPLHRCILRGKAM 593 (638)
Q Consensus 520 ~~~~~~~~~~~lL~~~~~~~---~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadv---n~~d~~G~TpLh~A~~~g~~~ 593 (638)
+...+...++..|+..|+.. +..+..|.||||+||..|+.++|++|+++|+++ +..+.. +||||+|+..|+.+
T Consensus 99 Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~e 177 (376)
T 2aja_A 99 AAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLH 177 (376)
T ss_dssp HHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHH
Confidence 33344444555555555521 223345677888888888888888888888652 222222 78888888888888
Q ss_pred HHHHHHhCCCCCCC--ccCCCCCHHHHHH-HcCCCcHHHHHHHhhCC
Q 006616 594 FAKLLLTRGADPRA--VNREGKTSLELAV-ESNFADSEVLAILSDSH 637 (638)
Q Consensus 594 ~v~lLl~~gad~~~--~d~~g~TpL~~A~-~~g~~d~eiv~lLle~g 637 (638)
+|++|+++|++++. .|..|.||||+|+ ..|+ .++|++|+++|
T Consensus 178 iv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~--~eiv~~Ll~~g 222 (376)
T 2aja_A 178 VLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH--HNVINFLLDCP 222 (376)
T ss_dssp HHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCC--HHHHHHHTTSH
T ss_pred HHHHHHHcCCccchhccCCCCCCHHHHHHHHCCC--HHHHHHHHhCC
Confidence 88888888888776 7777888888888 8877 77888887754
No 175
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.55 E-value=1e-15 Score=158.38 Aligned_cols=95 Identities=19% Similarity=0.070 Sum_probs=82.9
Q ss_pred CcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHHHHhCCC
Q 006616 524 RSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKLLLTRGA 603 (638)
Q Consensus 524 ~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~lLl~~ga 603 (638)
+...++.+|+..|++++..|..|+||||+|+..|+.+++++||++|++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 204 ~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga 283 (301)
T 2b0o_E 204 ASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA 283 (301)
T ss_dssp TTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 45567778888999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCccCCCCCHHHHHHHcCC
Q 006616 604 DPRAVNREGKTSLELAVESNF 624 (638)
Q Consensus 604 d~~~~d~~g~TpL~~A~~~g~ 624 (638)
+ .|.||||+|+..|+
T Consensus 284 ~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 284 G------TFAFPLHVDYSWVI 298 (301)
T ss_dssp H------TTSSCCC-------
T ss_pred C------CCCChhHHHHhcCC
Confidence 6 58899999999987
No 176
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.53 E-value=3.6e-17 Score=174.28 Aligned_cols=147 Identities=9% Similarity=0.015 Sum_probs=114.1
Q ss_pred cceecccccccchhhhhhhcccccCcc---ccccchhccchhhHHHHHhhhhccccCCCcccccccccCCcccccccccC
Q 006616 458 HQIWEGVRTNDKKAVYRHIVNFEVDVN---AVYEQVSCISSLTLAKAMLLNEQTSLERSSSSLTGNSSDRSSSGSLNLAG 534 (638)
Q Consensus 458 ~~L~~Av~~~d~~~v~~lLl~~gaDvN---~~~~~~~~~~~~~l~~~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~lL~~ 534 (638)
..|+.|+..|+.+.| ++|++.|+... ..+..+ ..+++.+...+...++.+|+.
T Consensus 94 T~Lh~Aa~~G~~e~v-~~Ll~~ga~~~~~~~~~~~~-----------------------~tpL~~Aa~~G~~eiv~~Ll~ 149 (376)
T 2aja_A 94 VICFVAAITGCSSAL-DTLCLLLTSDEIVKVIQAEN-----------------------YQAFRLAAENGHLHVLNRLCE 149 (376)
T ss_dssp HHHHHHHHHCCHHHH-HHHTTC--CCSSCC--CHHH-----------------------HHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHH-HHHHHcCCcHHHHHHhccCC-----------------------CCHHHHHHHcCCHHHHHHHHh
Confidence 678899998887766 45558887221 111111 114555566677778888888
Q ss_pred CCCCC---CcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcc--cCCCCCcHHHHHH-HhCCHHHHHHHHhCCCCCCCc
Q 006616 535 TSEGQ---TMDDLEGCTLLHLACDSADIGMLELLLQYGANINA--TDSRGLTPLHRCI-LRGKAMFAKLLLTRGADPRAV 608 (638)
Q Consensus 535 ~~~~~---~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~--~d~~G~TpLh~A~-~~g~~~~v~lLl~~gad~~~~ 608 (638)
.|+++ +..+.+ .||||+||..|+.++|++|+++|++++. .|..|+||||+|+ ..|+.++|++|+++|++
T Consensus 150 ~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~---- 224 (376)
T 2aja_A 150 LAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM---- 224 (376)
T ss_dssp SCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH----
T ss_pred CCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc----
Confidence 88752 333333 9999999999999999999999999987 8889999999999 99999999999998753
Q ss_pred cCCCCCHHHHHHHcCCCcHHHHHHHhhCCC
Q 006616 609 NREGKTSLELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 609 d~~g~TpL~~A~~~g~~d~eiv~lLle~ga 638 (638)
|.|||++|+..|+ .+++++|+++|+
T Consensus 225 ---~~taL~~Aa~~g~--~evv~lL~~~ga 249 (376)
T 2aja_A 225 ---LAYAEIHEFEYGE--KYVNPFIARHVN 249 (376)
T ss_dssp ---HHHHHHCTTTTTT--TTHHHHHHHHHH
T ss_pred ---cchHHHHHHHCCC--HHHHHHHHhcCc
Confidence 8899999999998 679999998763
No 177
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.52 E-value=2.2e-14 Score=152.22 Aligned_cols=96 Identities=19% Similarity=0.269 Sum_probs=89.4
Q ss_pred cCCCCCCcHHHHHHHh-CCHHHHHHHHHcCCCCcccC--CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCCccCCCCCHHH
Q 006616 541 MDDLEGCTLLHLACDS-ADIGMLELLLQYGANINATD--SRGLTPLHRCILRGKAMFAKLLLTRGADPRAVNREGKTSLE 617 (638)
Q Consensus 541 ~~d~~G~TpLh~Aa~~-g~~~~v~~Ll~~gadvn~~d--~~G~TpLh~A~~~g~~~~v~lLl~~gad~~~~d~~g~TpL~ 617 (638)
..+..+.|+||+|+.. |+++++++||++|+++|..+ ..|+||||+|+..|+.++|++||++|++++.+|..|.||||
T Consensus 194 l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 194 LGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLH 273 (368)
T ss_dssp ---CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 3445678999999999 99999999999999999998 88999999999999999999999999999999999999999
Q ss_pred HHHHcCCCcHHHHHHHhhCCC
Q 006616 618 LAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 618 ~A~~~g~~d~eiv~lLle~ga 638 (638)
+|+..|+ .++|++|+++||
T Consensus 274 ~A~~~g~--~~~v~~LL~~Ga 292 (368)
T 3jue_A 274 HATILGH--TGLACLFLKRGA 292 (368)
T ss_dssp HHHHHTC--HHHHHHHHHTTC
T ss_pred HHHHcCc--HHHHHHHHHCcC
Confidence 9999998 899999999986
No 178
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.51 E-value=2.8e-14 Score=146.64 Aligned_cols=101 Identities=20% Similarity=0.314 Sum_probs=68.9
Q ss_pred CCCcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCC-CCCCCCCccccccCcCcccCCccccccccccCCCC
Q 006616 94 KGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCS-KSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGV 172 (638)
Q Consensus 94 ~~~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~-~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 172 (638)
.....|.++|||+|++++ .++|+||||||+ ++.||||++... .+.|.+.
T Consensus 163 ~~~~~p~~~G~L~k~~~~-~k~WkkR~fvL~-~~~L~yyk~~~~~~~~~~i~---------------------------- 212 (291)
T 3tca_A 163 TSIIVPELEGALYLKEDG-KKSWKRRYFLLR-ASGIYYVPKGKTKTSRDLAC---------------------------- 212 (291)
T ss_dssp SSCCCCCCEEEEEEECTT-SSCEEEEEEEEC-SSEEEECCTTCCSSTTTCEE----------------------------
T ss_pred cCCCCCceEEEEEEeCCC-CCCceEEEEEEe-CCEEEEEecCccccccCcee----------------------------
Confidence 344567899999999654 678999999998 456677765433 2222110
Q ss_pred CCccccccceeecccceeecCC-----CCCCCcceEEEecCC------eeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 173 HDEKSAARHTVNLLTSTIKVDA-----DQSDLRFCFRIISPT------KNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 173 ~~~~~~~~~~i~l~~~~v~~~~-----~~~~rr~cF~I~t~~------rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
-+++..+.|.... ...+++|||.|++++ ++|+|+|+|++|+..||.||+.|.
T Consensus 213 ---------l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 213 ---------FIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp ---------EEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred ---------eccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 1222223222111 123568999999875 469999999999999999999775
No 179
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.49 E-value=3.5e-13 Score=121.27 Aligned_cols=127 Identities=22% Similarity=0.406 Sum_probs=78.7
Q ss_pred eEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccc--cccCCCCC----
Q 006616 100 IRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLS--SHYHGGVH---- 173 (638)
Q Consensus 100 ~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~---- 173 (638)
+|+|||+|+. ...+.|++|||||. +..|||+...... .+...-. ....+..-...++. --+|+...
T Consensus 2 ~k~G~L~~~~-~~~~~w~~~~fvL~-~~~L~y~~e~s~~-~~~~~~e-----~~~~~~~~~~~~~~~n~~fh~~~~~~~e 73 (150)
T 2fjl_A 2 IKNGILYLED-PVNHEWYPHYFVLT-SSKIYYSEETSSD-QGNEDEE-----EPKEASGSTELHSSLEVLFQGPNPAILE 73 (150)
T ss_dssp CEEEEEEEEE-TTTTEEEEEEEEEE-TTEEEECCCCSCS-SCCSCCC-----CSCCCCCSCCCCCCSSSGGGSSCSTTSC
T ss_pred CcceEEEeec-CCCCCceEeEEEEE-CCEEEEEeecccc-ccccCcc-----cccccCCchhhcccchhccccCCccccc
Confidence 5899999995 56789999999999 6778877532210 0000000 00000000000000 00011100
Q ss_pred -------C---ccccccceeecccceeecCCC-CCCCcceEEEecCC---eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 174 -------D---EKSAARHTVNLLTSTIKVDAD-QSDLRFCFRIISPT---KNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 174 -------~---~~~~~~~~i~l~~~~v~~~~~-~~~rr~cF~I~t~~---rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
+ -.....+.|+|..|+|...++ ..+++|+|+|.+++ ++|.|.|+|.+||.+||++|+.++.
T Consensus 74 ~~~~~l~E~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 74 PEREHLDENSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp TTCSSSCTTTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred hhHhcccccccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 0 012235779999999986443 34688999999985 5999999999999999999999875
No 180
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.46 E-value=3.1e-14 Score=157.56 Aligned_cols=97 Identities=20% Similarity=0.086 Sum_probs=82.9
Q ss_pred Cccccccc-ccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCC
Q 006616 513 SSSSLTGN-SSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGK 591 (638)
Q Consensus 513 ~~~~l~~~-~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~ 591 (638)
+++++++. ...+...++.+|+..|+++|..|..|+||||+||..|+.++|++||++||++|.+|..|+||||+|+..|+
T Consensus 173 t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 252 (497)
T 3lvq_E 173 LVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH 252 (497)
T ss_dssp CHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTC
T ss_pred hHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 44455543 45666778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCcc
Q 006616 592 AMFAKLLLTRGADPRAVN 609 (638)
Q Consensus 592 ~~~v~lLl~~gad~~~~d 609 (638)
.+++++|+++||+++...
T Consensus 253 ~~~~~~Ll~~ga~~~~~~ 270 (497)
T 3lvq_E 253 KECEELLEQAQAGTFAFP 270 (497)
T ss_dssp HHHHHHHHHTCC------
T ss_pred HHHHHHHHHhCCCCCCCc
Confidence 999999999999998743
No 181
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=3.8e-13 Score=118.68 Aligned_cols=98 Identities=15% Similarity=0.289 Sum_probs=75.5
Q ss_pred cceeEEEEEEeecCC--CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCC
Q 006616 97 VQTIRQGYLSKRSSN--LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 174 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~--~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 174 (638)
..|..++||.++... ..++||||||+|. +..|+||+++.+..
T Consensus 7 ~~pel~~~l~~~~pkk~tlK~~KrrWFvlk-~~~L~YyK~kee~~----------------------------------- 50 (137)
T 2ys3_A 7 GIPELKDHLRIFRPRKLTLKGYRQHWVVFK-ETTLSYYKSQDEAP----------------------------------- 50 (137)
T ss_dssp SCCCEECCCEECCTTSCCSSSSCCCEEEEC-SSCEEEESSTTTTT-----------------------------------
T ss_pred CCcchhHHHHhhCccccccccceeEEEEEe-CCEEEEECCchhcc-----------------------------------
Confidence 346789999988654 4568999999998 66888887765410
Q ss_pred ccccccceeecccceeecCCCCCCCcceEEEecCC----eeEEEEeCCHHHHHHHHHHHHHH
Q 006616 175 EKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT----KNYTLQAESALDQMDWIEKITGV 232 (638)
Q Consensus 175 ~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~----rt~~lqA~se~e~~~Wi~ai~~~ 232 (638)
..+.+.|+|..|.|.++......+|+|.+..|. ++|.|.|+|++++.+||.|++-+
T Consensus 51 --~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlA 110 (137)
T 2ys3_A 51 --GDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLA 110 (137)
T ss_dssp --SCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred --CCCceEEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHh
Confidence 123345889999988764334668999888774 89999999999999999999854
No 182
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.43 E-value=4.3e-13 Score=136.94 Aligned_cols=91 Identities=18% Similarity=0.172 Sum_probs=85.2
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCc------ccCCCCCcHHHHHHHh---CCHHHHHHHHhCCCCCCCccCCCCCHH
Q 006616 546 GCTLLHLACDSADIGMLELLLQYGANIN------ATDSRGLTPLHRCILR---GKAMFAKLLLTRGADPRAVNREGKTSL 616 (638)
Q Consensus 546 G~TpLh~Aa~~g~~~~v~~Ll~~gadvn------~~d~~G~TpLh~A~~~---g~~~~v~lLl~~gad~~~~d~~g~TpL 616 (638)
..++|+.|+..|+.+.+..|+..|++++ ..|..|+||||+|+.. |+.+++++|+++|++++.+|..|.|||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 4579999999999999999999999954 4588999999999999 899999999999999999999999999
Q ss_pred HHHHHcCCCcHHHHHHHhhCCC
Q 006616 617 ELAVESNFADSEVLAILSDSHG 638 (638)
Q Consensus 617 ~~A~~~g~~d~eiv~lLle~ga 638 (638)
|+|+..|+ .++|++|+++||
T Consensus 210 h~A~~~g~--~~~v~~Ll~~ga 229 (278)
T 1dcq_A 210 HYCCLTDN--AECLKLLLRGKA 229 (278)
T ss_dssp HHHHHTTC--HHHHHHHHHTTC
T ss_pred HHHHHcCC--HHHHHHHHHcCC
Confidence 99999998 899999999986
No 183
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.38 E-value=9.7e-13 Score=115.71 Aligned_cols=97 Identities=21% Similarity=0.431 Sum_probs=63.4
Q ss_pred EEEEEEe-ecCCCCC-CceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcccc
Q 006616 101 RQGYLSK-RSSNLRG-DWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSA 178 (638)
Q Consensus 101 k~GyL~K-r~~~~~~-~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (638)
.+|||.+ +.++.++ +|+||||||. ++.|+||+.+..+. ...
T Consensus 3 ~eGwl~~pk~~~~~k~~Wkkr~~vL~-~~kL~~y~~~~~~~------------------------------------~~~ 45 (117)
T 2rov_A 3 LEGWLSLPVRNNTKKFGWVKKYVIVS-SKKILFYDSEQDKE------------------------------------QSN 45 (117)
T ss_dssp SEEEEECCCCSSSSCCCCCEEEEEEE-TTEEEEESCHHHHH------------------------------------TTC
T ss_pred eEEEEEeecCCCccCCCcEEEEEEEE-CCEEEEEECCCCcc------------------------------------cCC
Confidence 4899996 2245677 8999999998 56677776542100 001
Q ss_pred ccceeecccce----ee----cCCCCCCCcceEEEecC------CeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 179 ARHTVNLLTST----IK----VDADQSDLRFCFRIISP------TKNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 179 ~~~~i~l~~~~----v~----~~~~~~~rr~cF~I~t~------~rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
+...|+|..+. |. +.....+.++.|+|+.+ .++++|.|+|++|+++||.+|+.+|.
T Consensus 46 p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 46 PYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp CSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred ceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 11223332111 11 11223345789999863 58999999999999999999998764
No 184
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=4.8e-12 Score=109.32 Aligned_cols=101 Identities=19% Similarity=0.255 Sum_probs=70.8
Q ss_pred cceeEEEEEEeecC-CCCCCceeeEEEEecCc-----eEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCC
Q 006616 97 VQTIRQGYLSKRSS-NLRGDWKRRFFVLDSRG-----MLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHG 170 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~-~~~~~WkrRwfvL~~~~-----~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 170 (638)
..++|+||||++.. ...+.|+||||||..+. .|-||..+++...|
T Consensus 10 e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~----------------------------- 60 (127)
T 2d9w_A 10 DGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRC----------------------------- 60 (127)
T ss_dssp CCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSC-----------------------------
T ss_pred CccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccC-----------------------------
Confidence 45679999999975 44556999999997632 57777766442111
Q ss_pred CCCCccccccceeecccce-eecCCCC---CCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 171 GVHDEKSAARHTVNLLTST-IKVDADQ---SDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 171 ~~~~~~~~~~~~i~l~~~~-v~~~~~~---~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
..++..|.|..|. |.+...+ +...++|.|.|++|+|+|.|+++ |+.+||.+|....
T Consensus 61 ------~~~rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~a 120 (127)
T 2d9w_A 61 ------EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAA-ERGDWVQAICLLA 120 (127)
T ss_dssp ------SCCEEEECGGGEEEEEECCSCSSSCSSCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHHH
T ss_pred ------CCCceEEEhhhCCeEecccCccCCCCcceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHHh
Confidence 1233457777664 3322222 13358999999999999999975 8999999998653
No 185
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.36 E-value=5.5e-13 Score=115.90 Aligned_cols=81 Identities=26% Similarity=0.350 Sum_probs=72.8
Q ss_pred cccccCCcccccccccCCCCCCCcCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHhCCHHHHHH
Q 006616 518 TGNSSDRSSSGSLNLAGTSEGQTMDDLEGCTLLHLACDSADIGMLELLLQYGANINATDSRGLTPLHRCILRGKAMFAKL 597 (638)
Q Consensus 518 ~~~~~~~~~~~~~lL~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~l 597 (638)
+.+...+....+..|+..|++++..|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 29 ~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 108 (110)
T 2zgd_A 29 LEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEI 108 (110)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHH
Confidence 33444455566777888899999999999999999999999999999999999999999999999999999999999998
Q ss_pred H
Q 006616 598 L 598 (638)
Q Consensus 598 L 598 (638)
|
T Consensus 109 L 109 (110)
T 2zgd_A 109 L 109 (110)
T ss_dssp H
T ss_pred h
Confidence 7
No 186
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.33 E-value=1.8e-12 Score=130.24 Aligned_cols=107 Identities=20% Similarity=0.381 Sum_probs=76.5
Q ss_pred cceeEEEEEEee-----cC------CCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccc
Q 006616 97 VQTIRQGYLSKR-----SS------NLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLS 165 (638)
Q Consensus 97 ~~~~k~GyL~Kr-----~~------~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~ 165 (638)
..+.|+|||.++ .+ ...+.|++|||||. ++.||||+.......
T Consensus 9 ~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLk-g~~L~fYKde~~~~~------------------------- 62 (279)
T 3a8n_A 9 GTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLK-GCTLFFYETDGRSGI------------------------- 62 (279)
T ss_dssp -CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEE-TTEECCBCCC------------------------------
T ss_pred CceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEe-CCEEEEEeccccccc-------------------------
Confidence 345699999753 11 13568999999998 677777776532110
Q ss_pred cccCCCCCCccccccceeecccceeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006616 166 SHYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASLL 237 (638)
Q Consensus 166 ~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~~~ 237 (638)
+....+...|.|..|++...++...++|+|.|.+++ ++|.|||+|++||++||.+|+.++....
T Consensus 63 --------~~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~~~ 127 (279)
T 3a8n_A 63 --------DHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAAV 127 (279)
T ss_dssp -----------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------ccccCCCceEeccCcEEEeccccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhhhc
Confidence 111223445788888888656666789999999765 7899999999999999999999987543
No 187
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.23 E-value=1e-11 Score=135.31 Aligned_cols=101 Identities=18% Similarity=0.365 Sum_probs=68.9
Q ss_pred ceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCC-CCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 98 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCS-KSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~-~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
.++|+|||.|++ ...++||||||+|++++.|+||+.+.. .+.|.+
T Consensus 5 ~v~keG~L~K~g-~~~k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i--------------------------------- 50 (446)
T 4ejn_A 5 AIVKEGWLHKRG-EYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREA--------------------------------- 50 (446)
T ss_dssp CEEEEEEEEEEE-TTTTEEEEEEEEEETTSBEEEESSCC-------C---------------------------------
T ss_pred eEEEEeeEEeec-cccccccceEEEEeeCCEEEEEecCCCCCccCcc---------------------------------
Confidence 478999999994 456799999999987777777776543 222221
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEecCCe-eE---EEEeCCHHHHHHHHHHHHHHHHHH
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIISPTK-NY---TLQAESALDQMDWIEKITGVIASL 236 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~r-t~---~lqA~se~e~~~Wi~ai~~~i~~~ 236 (638)
+...+.+..|.+... +..+++||.|.+++. ++ .|++++++++++|+.||+.+|..+
T Consensus 51 --~l~~~~~~~~~~~~~--~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~~ 110 (446)
T 4ejn_A 51 --PLNNFSVAQCQLMKT--ERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGL 110 (446)
T ss_dssp --CCGGGBCTTCEEEEE--CSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCCC-
T ss_pred --cccCccccceeecCC--CCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhhhh
Confidence 111223334454322 235679999998763 33 799999999999999999987543
No 188
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.21 E-value=3.5e-11 Score=120.94 Aligned_cols=99 Identities=16% Similarity=0.312 Sum_probs=62.8
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
..|.++|||+++..+ .+.|+||||+|+.+|++||.+.....+.+. .
T Consensus 156 ~~pe~~G~L~~k~~~-~k~WkkRyfvLr~sgLyy~~K~~sk~~r~l-----------------~---------------- 201 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDG-KKSWKKRYFLLRASGIYYVPKGKAKVSRDL-----------------V---------------- 201 (281)
T ss_dssp CCCCCEEEEEEECTT-SSCEEEEEEEECSSCEEEC---------CC-----------------E----------------
T ss_pred CCCccEEEEEEECCC-CCCCeEEEEEEeCCEEEEEeCCCCCccccc-----------------e----------------
Confidence 456789999999553 578999999999777654433322111110 0
Q ss_pred ccccceeecccceeecCC-----CCCCCcceEEEecCC------eeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 177 SAARHTVNLLTSTIKVDA-----DQSDLRFCFRIISPT------KNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~-----~~~~rr~cF~I~t~~------rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
.-+.|..+.|-... -....+|||.|.++. ..++|+|++++++..||.||+-+.
T Consensus 202 ----~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak 265 (281)
T 4gmv_A 202 ----CFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAK 265 (281)
T ss_dssp ----EEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred ----EEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHh
Confidence 00123232222110 123458999999764 469999999999999999999876
No 189
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.21 E-value=3.3e-11 Score=119.76 Aligned_cols=101 Identities=19% Similarity=0.232 Sum_probs=66.2
Q ss_pred CCcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCC
Q 006616 95 GKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 174 (638)
Q Consensus 95 ~~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 174 (638)
....|.++|||+++..+ .+.|+||||+|+.+|+ ||+++...+..+ ++
T Consensus 128 ~s~~P~~~G~L~~ke~~-~K~WkkRyfvLr~sgL-y~~~k~~sk~~r----------------~l--------------- 174 (256)
T 3hk0_A 128 SSSSPEIQGFLHVKELG-KKSWKKLYVCLRRSGL-YCSTKGTSAAPR----------------HL--------------- 174 (256)
T ss_dssp TTSCEEEEEEEEEECTT-SSCEEEEEEEEETTEE-EEESSTTCCCGG----------------GE---------------
T ss_pred CCCCCcceeEEEEecCC-CCcceEEEEEEeCCEE-EEEecCCCCccc----------------cc---------------
Confidence 34567899999999554 6789999999997765 555554321110 00
Q ss_pred ccccccceeecccceeecCC-----CCCCCcceEEEecCCe------eEEEEeCCHHHHHHHHHHHHHHH
Q 006616 175 EKSAARHTVNLLTSTIKVDA-----DQSDLRFCFRIISPTK------NYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 175 ~~~~~~~~i~l~~~~v~~~~-----~~~~rr~cF~I~t~~r------t~~lqA~se~e~~~Wi~ai~~~i 233 (638)
..-++|....|-... -....+|||.|..+.. .++|+|++++++..||.||+.+.
T Consensus 175 -----~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak 239 (256)
T 3hk0_A 175 -----QLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLK 239 (256)
T ss_dssp -----EEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHH
T ss_pred -----eEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHH
Confidence 000122222222111 0123479999997643 59999999999999999999887
No 190
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.09 E-value=3.4e-10 Score=101.72 Aligned_cols=94 Identities=20% Similarity=0.251 Sum_probs=70.0
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
..++|+|||.||.+ . .|++|||+|.+...|||.......
T Consensus 50 e~Ilk~G~v~KrkG-l--~~kkR~liLT~~PrL~Yvdp~~~~-------------------------------------- 88 (151)
T 1w1g_A 50 NLILKMGPVDKRKG-L--FARRRQLLLTEGPHLYYVDPVNKV-------------------------------------- 88 (151)
T ss_dssp CCEEEEEEEEEEET-T--EEEEEEEEEETTTEEEEEETTTTE--------------------------------------
T ss_pred CcEEEEEEEEeccc-C--cceeEEEEEcCCceEEEEcCcccc--------------------------------------
Confidence 46799999999855 2 499999999977777776654332
Q ss_pred ccccceeeccc-ceeecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006616 177 SAARHTVNLLT-STIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSS 239 (638)
Q Consensus 177 ~~~~~~i~l~~-~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~~ 239 (638)
..+.|.+.. +.|.+.. ..+|.|.+|+|+|+|.+. ..++++|++||+.++...+..
T Consensus 89 --~KGeIpls~~l~ve~k~-----~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~~~~~~~ 144 (151)
T 1w1g_A 89 --LKGEIPWSQELRPEAKN-----FKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVWRQRYQS 144 (151)
T ss_dssp --EEEEECCCTTCEEEESS-----SSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHHHHHHCC
T ss_pred --ccceEecCCCeeEEEcC-----CCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHHHHHhcc
Confidence 223344433 3344322 238999999999999997 889999999999999776654
No 191
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.02 E-value=1e-09 Score=97.90 Aligned_cols=99 Identities=15% Similarity=0.251 Sum_probs=72.0
Q ss_pred CcceeEEEEEEeecCC--CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCC
Q 006616 96 KVQTIRQGYLSKRSSN--LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 173 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~--~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 173 (638)
...|...+||...... ..|.||+||||++ ++.|+||+++++.
T Consensus 23 t~iPeL~dyLk~~~pkrltLKgfKryWfv~k-Dt~LsyYKSkEe~----------------------------------- 66 (165)
T 4bbk_A 23 TDIPKLADYLKLFRPKKLMLKACKQYWFVFK-DTSIAYFKNKELE----------------------------------- 66 (165)
T ss_dssp ---CCEEEEEEEEC-------CCEEEEEEEE-TTEEEEESSGGGT-----------------------------------
T ss_pred ccChhhHhHHHhhcccccccccceeEEEEEe-CCEEEEEcCHHHh-----------------------------------
Confidence 3456678999764332 4579999999998 7889999987542
Q ss_pred CccccccceeecccceeecCCCCCCCcceEEEecC---C-eeEEEEeCCHHHHHHHHHHHHHH
Q 006616 174 DEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISP---T-KNYTLQAESALDQMDWIEKITGV 232 (638)
Q Consensus 174 ~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~---~-rt~~lqA~se~e~~~Wi~ai~~~ 232 (638)
...+.+.|+|..|.|.++..-...+|+|+|..| . ..+.|.|++|.++.+||.|.+-+
T Consensus 67 --~geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLA 127 (165)
T 4bbk_A 67 --QGEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWMAACILA 127 (165)
T ss_dssp --TSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred --cCCCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhc
Confidence 123456799999999975444456899998766 2 47899999999999999998754
No 192
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.02 E-value=1.2e-09 Score=98.69 Aligned_cols=98 Identities=12% Similarity=0.242 Sum_probs=74.8
Q ss_pred cceeEEEEEEeecCC--CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCC
Q 006616 97 VQTIRQGYLSKRSSN--LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 174 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~--~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 174 (638)
..|...+||...... ..|.||+||||++ ++.|+||+++++.
T Consensus 45 ~iPeL~dyLk~~~pk~~tLKgyKryWFv~k-d~~LsyYKskEe~------------------------------------ 87 (173)
T 4f7h_A 45 SIPELADYIKVFKPKKLTLKGYKQYWCTFK-DTSISCYKSKEES------------------------------------ 87 (173)
T ss_dssp GTTCEEEEEEEECCBTTBCCCCEEEEEEEE-TTEEEEESCGGGC------------------------------------
T ss_pred cChhhHhHHHhhcchhcccccceeEEEEEe-CCEEEEEcCHhHh------------------------------------
Confidence 345678999754332 4589999999998 7889999887541
Q ss_pred ccccccceeecccceeecCCCCCCCcceEEEecC---C-eeEEEEeCCHHHHHHHHHHHHHH
Q 006616 175 EKSAARHTVNLLTSTIKVDADQSDLRFCFRIISP---T-KNYTLQAESALDQMDWIEKITGV 232 (638)
Q Consensus 175 ~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~---~-rt~~lqA~se~e~~~Wi~ai~~~ 232 (638)
...+.+.|+|..|.|.++......+|+|.+..| + ..+.|.|+++.++.+||.|.+-+
T Consensus 88 -~geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLA 148 (173)
T 4f7h_A 88 -SGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLA 148 (173)
T ss_dssp -SSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred -cCCCceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHHHHHHHHhhhh
Confidence 123456799999999976444456788888765 2 57999999999999999998754
No 193
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=98.96 E-value=5.3e-09 Score=113.45 Aligned_cols=99 Identities=15% Similarity=0.290 Sum_probs=65.4
Q ss_pred ceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 98 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
..+++|.|.+.++ +.++.|||+|-++-+++...+... ..
T Consensus 243 ~li~~g~l~~~~~---~~~~~r~~fLF~d~Ll~~k~~~~~--------------------------------------~y 281 (434)
T 3mpx_A 243 EFLKEGTLMKVTG---KNRRPRHLFLMNDVLLYTYPQKDG--------------------------------------KY 281 (434)
T ss_dssp CEEECCEEEEEET---TEEEEEEEEEESSEEEEEEECTTS--------------------------------------CE
T ss_pred ceEecceEEEEeC---CCceEEEEEEECCEEEEEEecCCC--------------------------------------eE
Confidence 4579999998754 358899999997766665433211 12
Q ss_pred cccceeecccceeecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006616 178 AARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLS 238 (638)
Q Consensus 178 ~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~ 238 (638)
.....|.|....|.. .++.+.+|+|.|.++.++|+|+|.|++|++.||++|+.+|.....
T Consensus 282 ~~k~~i~L~~l~v~~-~~~~~~~~~f~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~e~~~ 341 (434)
T 3mpx_A 282 RLKNTLAVANMKVSR-PVMEKVPYALKIETSESCLMLSASSCAERDEWYGCLSRALPEDYK 341 (434)
T ss_dssp EEEEEEEC-----CC-CCCTTSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHC------
T ss_pred EEEEEEEcCCcEEEe-cCCCCCCeeEEEecCCeEEEEecCCHHHHHHHHHHHHHHHHHHHh
Confidence 223446666555543 233356899999999999999999999999999999999976543
No 194
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.88 E-value=5.3e-09 Score=90.28 Aligned_cols=101 Identities=16% Similarity=0.267 Sum_probs=62.9
Q ss_pred CcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCC-CCCCCCCCccccccCcCcccCCccccccccccCCCCCC
Q 006616 96 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQC-SKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 174 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~-~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 174 (638)
...++|+||+.+. .+..+.|||||++|+. .-+.||++.. .++-.
T Consensus 5 ~s~vlkeGW~VH~-t~~d~~rKRHYWrLD~-K~Itlf~~e~~~~~yk--------------------------------- 49 (125)
T 2coa_A 5 SSGTLREGWVVHY-SNKDTLRKRHYWRLDC-KCITLFQNNTTNRYYK--------------------------------- 49 (125)
T ss_dssp CCSCSEEEEEEEC-CSSSCCCEEEEEEECS-SEEEEESSSSCSSCSE---------------------------------
T ss_pred CCceeecceEEEE-ccCCccccceeeEecC-CeEEEEecCCCCceee---------------------------------
Confidence 4567899999999 4457789999999985 4555555432 21110
Q ss_pred cccccc-ceeecccceeecCCCCCCCcceEEEecCCeeEEEEeC---C--------HHHHHHHHHHHHHHH
Q 006616 175 EKSAAR-HTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAE---S--------ALDQMDWIEKITGVI 233 (638)
Q Consensus 175 ~~~~~~-~~i~l~~~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~---s--------e~e~~~Wi~ai~~~i 233 (638)
.++. +-+.+..|..........+.+||+|+|.+.+|+.+++ . .+.++.|..||++|+
T Consensus 50 --eIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 50 --EIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp --EEETTTCCEEEESCCCSSSCTTSCCEEEEEECSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred --eeehhHeecccccccccccCCCCCCceEEEEeCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 1111 1122222221110012235699999999999999974 1 256999999999875
No 195
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.83 E-value=2.6e-08 Score=86.21 Aligned_cols=103 Identities=17% Similarity=0.272 Sum_probs=64.2
Q ss_pred CcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 96 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 96 ~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
...++|+||+.+.+. ..+.|||+|++|+...+.+|......+.-.
T Consensus 5 ~s~vlkeGWmVH~t~-~d~~rKRHYWrLD~K~Itlf~~e~~~k~yk---------------------------------- 49 (129)
T 2d9z_A 5 SSGMVKEGWMVHYTS-RDNLRKRHYWRLDSKCLTLFQNESGSKYYK---------------------------------- 49 (129)
T ss_dssp CTTSEEEEEEEEEES-SCCCCEEEEEEEESSCEEEESCSSCCSCCC----------------------------------
T ss_pred CCceeecceEEEEcc-CCccccceeeEecCCeEEEEecCCCCceec----------------------------------
Confidence 346789999999854 456899999999965554443332222111
Q ss_pred ccccc-ceeecccceeecCCCCCCCcceEEEecCCeeEEEEeCC---------------HHHHHHHHHHHHHHHH
Q 006616 176 KSAAR-HTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAES---------------ALDQMDWIEKITGVIA 234 (638)
Q Consensus 176 ~~~~~-~~i~l~~~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~s---------------e~e~~~Wi~ai~~~i~ 234 (638)
.++. +-+.+..+...........++||+|+|.+.+|+.+++. .+.++.|..||++|+.
T Consensus 50 -eIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 50 -EIPLSEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp -EECTTTCCEECCTTCCCCSSSCSCCCSEEEECSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred -eeeHHHhcccccccCccccCCCCCCceEEEEECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 1111 11122221111000112346999999999999998853 6899999999999874
No 196
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.59 E-value=6.2e-07 Score=77.88 Aligned_cols=104 Identities=15% Similarity=0.137 Sum_probs=69.2
Q ss_pred eeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcccc
Q 006616 99 TIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSA 178 (638)
Q Consensus 99 ~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (638)
.+++|.|.+-.....+.=+++||+|-++.++|-..+.... | +..
T Consensus 8 lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~-------------------~-----------------~~~ 51 (113)
T 1zc3_B 8 LVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRR-------------------G-----------------MYR 51 (113)
T ss_dssp EEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTT-------------------S-----------------CEE
T ss_pred EEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCc-------------------c-----------------cEE
Confidence 5789999987443222224579999988888766543210 0 001
Q ss_pred ccceeecccceeecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006616 179 ARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLS 238 (638)
Q Consensus 179 ~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~ 238 (638)
....+.|....|.-.++....+++|.|.++.+++.|+|+|++|..+||.+|+.+|..++.
T Consensus 52 ~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~~~~~~ 111 (113)
T 1zc3_B 52 YNALYPLDRLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRALSD 111 (113)
T ss_dssp EEEEEETTTCEEEEECCBTTBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcccCEEEECCCCcccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHHHhh
Confidence 111234433333322333456899999999999999999999999999999999977653
No 197
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=98.40 E-value=1.4e-05 Score=85.58 Aligned_cols=99 Identities=19% Similarity=0.285 Sum_probs=66.7
Q ss_pred eeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcccc
Q 006616 99 TIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSA 178 (638)
Q Consensus 99 ~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (638)
.+++|.|.+.... .+.++.||++|-++-+++...+ .. ...
T Consensus 234 li~~G~l~~~~~~-~~~~~~~~~fLF~d~Ll~~k~k-~~--------------------------------------~y~ 273 (406)
T 2vrw_B 234 PKIDGELKITSVE-RRSKTDRYAFLLDKALLICKRR-GD--------------------------------------SYD 273 (406)
T ss_dssp EEEEEEEEEECSS-CCSCEEEEEEEESSEEEEEEEE-TT--------------------------------------EEE
T ss_pred ccccccEEEEecC-CCccceEEEEecCCEEEEEEec-CC--------------------------------------ceE
Confidence 6799999887432 3468999999997766665433 11 111
Q ss_pred ccceeecccceeecCCCCC----CCcceEEEec--CCeeEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006616 179 ARHTVNLLTSTIKVDADQS----DLRFCFRIIS--PTKNYTLQAESALDQMDWIEKITGVIASLL 237 (638)
Q Consensus 179 ~~~~i~l~~~~v~~~~~~~----~rr~cF~I~t--~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~ 237 (638)
....|.|....|...++.. .-.+.|.|++ +.+.|+|+|.|+++++.||++|+.+|..+.
T Consensus 274 ~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 338 (406)
T 2vrw_B 274 LKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 338 (406)
T ss_dssp EEEEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence 2234555555554322211 2258999987 457899999999999999999999998654
No 198
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=98.26 E-value=3.5e-05 Score=86.50 Aligned_cols=99 Identities=19% Similarity=0.260 Sum_probs=68.1
Q ss_pred eeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcccc
Q 006616 99 TIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSA 178 (638)
Q Consensus 99 ~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (638)
.+++|.|.+... ..+.++.|||+|-++-+++..++ .. ...
T Consensus 406 ll~~G~l~~~~~-~~~~~~~r~~fLF~d~Ll~~k~~-~~--------------------------------------~y~ 445 (587)
T 3ky9_A 406 PKIDGELKITSV-ERRSKMDRYAFLLDKALLICKRR-GD--------------------------------------SYD 445 (587)
T ss_dssp EEEEEEEEEECS-SCCSCEEEEEEEETTEEEEEEEE-TT--------------------------------------EEE
T ss_pred eEEEeeEEEEec-cCCCcceEEEEEECCEEEEEEec-CC--------------------------------------EEE
Confidence 689999998743 34578999999997777665443 11 112
Q ss_pred ccceeecccceeecCCCC----CCCcceEEEecCC--eeEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006616 179 ARHTVNLLTSTIKVDADQ----SDLRFCFRIISPT--KNYTLQAESALDQMDWIEKITGVIASLL 237 (638)
Q Consensus 179 ~~~~i~l~~~~v~~~~~~----~~rr~cF~I~t~~--rt~~lqA~se~e~~~Wi~ai~~~i~~~~ 237 (638)
....|.|....|....+. ..-+++|.|++.. ++|+|+|.|++|++.||++|+.+|....
T Consensus 446 ~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~ 510 (587)
T 3ky9_A 446 LKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 510 (587)
T ss_dssp EEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred eeeeechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence 234466666665532211 1235889999876 7999999999999999999999997654
No 199
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.06 E-value=1.4e-05 Score=70.91 Aligned_cols=56 Identities=11% Similarity=0.245 Sum_probs=44.7
Q ss_pred ccceeecccceeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 179 ARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 179 ~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
..+.+.|....|....+..+.++||+|..+. +++.+.|.|.+|+++||.+|+.+|.
T Consensus 70 ~kgklPL~g~~V~~~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~ 126 (132)
T 1v61_A 70 YQGKIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTK 126 (132)
T ss_dssp EEEEECTTTCBCSTTCSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHHT
T ss_pred EEEEEecceeEEEeccccccCccEEEEecCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 3455667666666433334678999999987 8999999999999999999999885
No 200
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.02 E-value=5.9e-05 Score=65.39 Aligned_cols=104 Identities=15% Similarity=0.248 Sum_probs=67.6
Q ss_pred CCcceeEEEEEEeecC-C------CCCCceeeEEEEecC-----ceEEEEecCCC-CCCCCCCccccccCcCcccCCccc
Q 006616 95 GKVQTIRQGYLSKRSS-N------LRGDWKRRFFVLDSR-----GMLYYYRKQCS-KSSGSGSQLSSQRNSSELGSGLLS 161 (638)
Q Consensus 95 ~~~~~~k~GyL~Kr~~-~------~~~~WkrRwfvL~~~-----~~l~y~~~~~~-~~~g~~~~~~~~~~~~~~~~g~~~ 161 (638)
..+..+|||.|.-..+ . ....|.|+|++|... .+|-||..+.. +|+. +|+
T Consensus 14 ~~~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~----------------~i~- 76 (136)
T 1v5m_A 14 ELVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKV----------------SIP- 76 (136)
T ss_dssp CSCSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSS----------------CEE-
T ss_pred ccceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCcccCCcc----------------ccc-
Confidence 3456789998843322 1 235799999999874 45777765432 2221 111
Q ss_pred cccccccCCCCCCccccccceeecccceeecCCCCCCCcceEEEecCCe-eEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 162 RWLSSHYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTK-NYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~r-t~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
+ ..-..+..++..- =+|+.+.|.|.+.++ .|+|+|.++.++.+|+..|+..+..
T Consensus 77 ---c--------------s~I~EVR~tt~LE---mPD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~ 131 (136)
T 1v5m_A 77 ---L--------------SAIIEVRTTMPLE---MPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDS 131 (136)
T ss_dssp ---T--------------TTCCBCCCCCCSS---SCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ---h--------------hhhhhhhhccccc---cCCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 0 0002233333321 235679999999886 8999999999999999999988754
No 201
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=98.01 E-value=4.9e-05 Score=67.54 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=44.7
Q ss_pred cceeecccceeecCCCCCCCcceEEEecCC------eeEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006616 180 RHTVNLLTSTIKVDADQSDLRFCFRIISPT------KNYTLQAESALDQMDWIEKITGVIASLLS 238 (638)
Q Consensus 180 ~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~------rt~~lqA~se~e~~~Wi~ai~~~i~~~~~ 238 (638)
+..+.|....|... +...-+|+|.|.++. ++++|+|.|+.||..||++|+.+|+....
T Consensus 63 r~~~~L~gm~V~~~-e~e~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~e 126 (140)
T 3qwm_A 63 RQSFSLYGMQVLLF-ENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQE 126 (140)
T ss_dssp EEEECCTTEEEEEE-CCSSCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeecceEEEcc-cCCCCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 34566666666543 333568999999863 67999999999999999999999987543
No 202
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=98.00 E-value=4.9e-06 Score=83.76 Aligned_cols=54 Identities=22% Similarity=0.432 Sum_probs=49.1
Q ss_pred ChhhhhHHHhHHHHHh-hhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 006616 1 MDAHLRYFKQGYELLH-QMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQI 54 (638)
Q Consensus 1 ~~a~~~ff~~G~~l~~-~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 54 (638)
|+||++|||+||+++. +|+||+++|..+++++|..++.+++.+.+++.+++...
T Consensus 204 ~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~~r~~~~~~~~~~~~~~~~l~~~~ 258 (265)
T 2q12_A 204 MQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEVAS 258 (265)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6899999999999985 99999999999999999999999999888888877543
No 203
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=97.95 E-value=0.00022 Score=76.09 Aligned_cols=106 Identities=11% Similarity=0.144 Sum_probs=71.0
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
...+++|.|.+.+.. .+.++.|||+|-++-+++...+... + ..
T Consensus 255 r~Li~~G~l~~~~~~-~~k~~~r~~fLF~d~Ll~~k~~~~~---~---------------------------------~~ 297 (402)
T 2dfk_A 255 SELIYTGEMAWIYQP-YGRNQQRVFFLFDHQMVLCKKDLIR---R---------------------------------DI 297 (402)
T ss_dssp CCEEEEEEEEEESST-TCCCEEEEEEEETTEEEEEEECSSC---T---------------------------------TC
T ss_pred cceEEeceEEEEecc-CCceEEEEEEeeCCEEEEEEecccc---C---------------------------------Cc
Confidence 346899999987542 3458899999997776665443211 0 01
Q ss_pred ccccceeecccceeecCCCCCC------CcceEEEecC--CeeEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006616 177 SAARHTVNLLTSTIKVDADQSD------LRFCFRIISP--TKNYTLQAESALDQMDWIEKITGVIASLLSS 239 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~------rr~cF~I~t~--~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~~ 239 (638)
......|.|..+.|....+..+ -+++|.|..+ ..+|+|+|.|++++..||++|+.++..+...
T Consensus 298 ~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~~ 368 (402)
T 2dfk_A 298 LYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQED 368 (402)
T ss_dssp EEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEeeeeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhh
Confidence 1223345565555543222111 2478999986 4689999999999999999999999876654
No 204
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=97.90 E-value=0.00028 Score=76.89 Aligned_cols=105 Identities=11% Similarity=0.183 Sum_probs=70.7
Q ss_pred ceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 98 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
..+++|.|.+.+.. .+.++.|||+|-++-+++...+... + ...
T Consensus 333 ~li~~G~l~~~~~~-~~~~~~r~~fLF~d~Ll~~k~~~~~---~---------------------------------~~~ 375 (466)
T 2pz1_A 333 ELIYSGELTRVTQP-QAKSQQRMFFLFDHQLIYCKKDLLR---R---------------------------------DVL 375 (466)
T ss_dssp CEEEEEEEEEECTT-TCCEEEEEEEEETTEEEEEEECSSC---T---------------------------------TCE
T ss_pred eeEEeeeEEEEecC-CCCeeEEEEEEECCEEEEEEecccc---C---------------------------------Cce
Confidence 46899999987542 3458899999997766665443211 0 011
Q ss_pred cccceeecccceeecCCCCC------CCcceEEEecC--CeeEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006616 178 AARHTVNLLTSTIKVDADQS------DLRFCFRIISP--TKNYTLQAESALDQMDWIEKITGVIASLLSS 239 (638)
Q Consensus 178 ~~~~~i~l~~~~v~~~~~~~------~rr~cF~I~t~--~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~~ 239 (638)
.....|.|..+.|....+.. .-+++|.|..+ .++|+|+|.|++|+..||++|+.++..+...
T Consensus 376 ~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~~ 445 (466)
T 2pz1_A 376 YYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQLD 445 (466)
T ss_dssp EEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeeeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhh
Confidence 22334555555554322211 22589999986 4689999999999999999999999876544
No 205
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.88 E-value=0.00041 Score=73.05 Aligned_cols=112 Identities=19% Similarity=0.209 Sum_probs=67.1
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
...+++|.|.++.+ .+.++.|||+|-++-+++..++........ .. .+.. |+ .+..
T Consensus 251 R~li~~G~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~-----~~-------~~~~---------~~-~~~~ 306 (368)
T 1xcg_A 251 RKMIHEGPLTWRIS--KDKTLDLHVLLLEDLLVLLQKQDEKLLLKC-----HS-------KTAV---------GS-SDSK 306 (368)
T ss_dssp SCEEEEEEEEECCS--SSCCCEEEEEEESSEEEEEEECSSCEECCC----------------------------------
T ss_pred ceEEeecceEeeec--CCCeeEEEEEcccccHHHhhcccccceeee-----cc-------cccc---------CC-CCcc
Confidence 35689999986632 346899999999776666544321100000 00 0000 00 0111
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEecC-----CeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIISP-----TKNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~-----~rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
......|.|..+.|+..+. .+.+|.|++. .++|+|+|.|+++++.||++|+.+|..
T Consensus 307 ~~~~~~i~l~~~~v~~~~~---~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 307 QTFSPVLKLNAVLIRSVAT---DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp -CCCSEEEGGGEEEEECSS---CSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCcCCceEccceeeecccC---CCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 2223456666666653222 2567888764 478999999999999999999999865
No 206
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.84 E-value=0.00048 Score=73.86 Aligned_cols=112 Identities=20% Similarity=0.196 Sum_probs=67.8
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
...+++|.|.++.+ .+.|+.|||+|-++-+++..++.....-.... . .. .+..+.+
T Consensus 293 r~li~eG~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~----~-----------------~~-~~~~~~~ 348 (418)
T 3t06_A 293 RKMIHEGPLTWRIS--KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHS----K-----------------TA-VGSSDSK 348 (418)
T ss_dssp SCEEEEEEEEECCB--TTBCCEEEEEEESSEEEEEEECSSCEECCC----------------------------------
T ss_pred ceeEEeceEEEEeC--CCCeEEEEEEecCCEEEEEEEcCCceEEeecc----c-----------------cc-ccCCCcc
Confidence 45689999997743 24589999999977777665443210000000 0 00 0000122
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEecC-----CeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIISP-----TKNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~-----~rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
......|.|....|+..+. -...|.|++. .++|+|+|.|.+|++.||++|+.+|..
T Consensus 349 ~~~k~~i~l~~~~v~~~~~---~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~ 409 (418)
T 3t06_A 349 QTFSPVLKLNAVLIRSVAT---DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 409 (418)
T ss_dssp -CCCSEEEGGGEEEEECSS---CSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cccCCceechhceeccccc---cCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 2223456666666663222 2456777763 379999999999999999999999864
No 207
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.76 E-value=0.0002 Score=67.77 Aligned_cols=103 Identities=20% Similarity=0.274 Sum_probs=66.5
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
...+++|-|..+.+. +.|+.||++|-++-+++..++ +.+ +... . .+.+
T Consensus 69 R~Ll~eG~L~~k~~~--~~~~d~~~fLf~D~Ll~~~~~-~~k------------------------y~~~-~----~~~~ 116 (185)
T 2lg1_A 69 KKLVRDGSVFLKNAA--GRLKEVQAVLLTDILVFLQEK-DQK------------------------YIFA-S----LDQK 116 (185)
T ss_dssp SCEEEEEEEEEECTT--CCEEEEEEEEESSEEECCEEE-TTE------------------------EECC-C----CSSS
T ss_pred CceeeeceEEEeccC--CCeeeEEEEeecCEEEEEEec-CCE------------------------EEEE-c----ccCC
Confidence 467899999866433 369999999997766655433 211 0000 0 0111
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEecC----CeeEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIISP----TKNYTLQAESALDQMDWIEKITGVIASLL 237 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~----~rt~~lqA~se~e~~~Wi~ai~~~i~~~~ 237 (638)
...|.|....|+..+. +.+ .|-+++. .+.|.|.|.|.+|++.||++|+.+|...-
T Consensus 117 ---~pvi~L~~~~vre~a~--d~~-~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~ 175 (185)
T 2lg1_A 117 ---STVISLKKLIVREVAH--EEK-GLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTLN 175 (185)
T ss_dssp ---CSEEESSSCEEECCSS--CSS-EEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCeEeecceEEeccCC--CCC-eEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhCC
Confidence 1235666677774333 333 3444442 37899999999999999999999998754
No 208
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.70 E-value=0.0013 Score=72.83 Aligned_cols=114 Identities=21% Similarity=0.224 Sum_probs=65.6
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
...+++|.|.++... +.|+.|||+|-++-+|+..++.....-.. .+ ..+ ....+.+
T Consensus 410 R~LI~eG~l~~~~~~--~k~~~r~~fLF~D~LL~~k~k~~ky~~k~------------~~-----~~~-----~~~~d~k 465 (536)
T 3odw_A 410 KKLVHEGPLTWRVTK--DKAVEVHVLLLDDLLLLLQRQDERLLLKS------------HS-----RTL-----TPTPDGK 465 (536)
T ss_dssp SCEEEEEEEEEESCC-----CEEEEEEESSEEEEEEEETTEEECCC------------C---------------------
T ss_pred ceeeeecceEEEecC--CCeeEEEEEEcCCEEEEEEEcCCeEEEee------------cc-----ccc-----ccccccc
Confidence 457899999887542 46899999999777777655432100000 00 000 0001122
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEec----CCeeEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIIS----PTKNYTLQAESALDQMDWIEKITGVIASLL 237 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t----~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~ 237 (638)
......|.|....|+-... + ..+|.|++ +..+|.|+|.|.+|++.||+.|+.+|..+.
T Consensus 466 ~~~~~~i~L~~l~v~e~~~--d-~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~ 527 (536)
T 3odw_A 466 TMLRPVLRLTSAMTREVAT--D-HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 527 (536)
T ss_dssp -CCCSEEEGGGEEEEECTT--C-TTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSC
T ss_pred cccCceeecccceeecccc--c-CCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCC
Confidence 2223346676666664322 3 33455544 347899999999999999999999997543
No 209
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.69 E-value=0.001 Score=70.14 Aligned_cols=108 Identities=19% Similarity=0.264 Sum_probs=65.8
Q ss_pred ceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCC----CCC
Q 006616 98 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHG----GVH 173 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~ 173 (638)
..+++|.|.++... +.|+.|||+|-++-+++..++.... .. ..|+ ...
T Consensus 258 ~li~eG~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~k~~k~-------------------------~~-k~~~~~~~~~~ 309 (377)
T 3p6a_A 258 KLVHEGPLTWRVTK--DKAVEVHVLLLDDLLLLLQRQDERL-------------------------LL-KSHSRTLTPTP 309 (377)
T ss_dssp CEEEEEEEEEESSS--SCEEEEEEEEESSEEEEEEEETTEE-------------------------EC-CCCCCC-----
T ss_pred eEEEECCcEEEecC--CCeEEEEEEeeCCEEEEEEEcCcee-------------------------EE-eecccccccCc
Confidence 46899999776442 3689999999977777665442110 00 0000 000
Q ss_pred CccccccceeecccceeecCCCCCCCcceEEEec---CCeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 174 DEKSAARHTVNLLTSTIKVDADQSDLRFCFRIIS---PTKNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 174 ~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t---~~rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
+.+......|.|....++... .+.+..|.|.. +...|.|+|.|.+|++.||+.|+.+|+.
T Consensus 310 ~~k~~~~~~i~l~~~~v~e~~--~~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~ 372 (377)
T 3p6a_A 310 DGKTMLRPVLRLTSAMTREVA--TDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGS 372 (377)
T ss_dssp ----CSCSEEEGGGEEEEECT--TCTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCeEechhhhccccc--cccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHh
Confidence 112112223566666666422 23345565554 3468999999999999999999999875
No 210
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.64 E-value=3.2e-05 Score=75.96 Aligned_cols=39 Identities=26% Similarity=0.565 Sum_probs=27.5
Q ss_pred CCcceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecC
Q 006616 95 GKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQ 135 (638)
Q Consensus 95 ~~~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~ 135 (638)
+...|-++|||+|+ ++..++|+||||||+++ .+.||+..
T Consensus 17 ~~~~~~~~g~l~~~-~~~~~~w~~rw~vl~~~-~~~~~~~~ 55 (228)
T 3tfm_A 17 GPGSPYFHSFLYMN-GGLMNSWKRRWCVLKDE-TFLWFRSK 55 (228)
T ss_dssp ----CCEEEEEEEC-CTTTCCCEEEEEEEETT-EEEEESSC
T ss_pred CCCCCceEEEEeec-CcccccceEEEEEEeCC-EEEEeccC
Confidence 34456789999999 55678999999999955 55555543
No 211
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=97.60 E-value=0.00036 Score=73.04 Aligned_cols=104 Identities=15% Similarity=0.231 Sum_probs=69.6
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
...+++|.|.+. + .++.|||+|-++-+++...+... +. +. |. ....
T Consensus 245 r~li~eG~l~~~-g----~~~~~~~fLF~d~Ll~~k~~~~~-~~----~~-----------------------~~-~~~~ 290 (354)
T 1dbh_A 245 NEFIMEGTLTRV-G----AKHERHIFLFDGLMICCKSNHGQ-PR----LP-----------------------GA-SNAE 290 (354)
T ss_dssp CCEEEEEEEEET-T----CSSCEEEEEESSEEEEEEECTTC-CC----CT-----------------------TS-CCCS
T ss_pred ceEEEEeeEEEE-e----cCceEEEEEeCCEEEEEecCCCC-CC----CC-----------------------CC-CCcc
Confidence 356899999887 2 57899999997766655443211 00 00 00 0111
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
......|.|..+.|....+...-+++|.|.+++ .+|+|+|.|+++++.|+++|+.+..
T Consensus 291 y~~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 291 YRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp EEEEEEEESCSCEEEECCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred eeEEEEEeccceEEEeCCcccccCccEEEecCCCCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 223455777766666433333457999999986 8999999999999999999998764
No 212
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=97.45 E-value=0.0012 Score=68.98 Aligned_cols=109 Identities=18% Similarity=0.268 Sum_probs=68.2
Q ss_pred ceeEEEEEEeecCCC----------CCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccc
Q 006616 98 QTIRQGYLSKRSSNL----------RGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSH 167 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~----------~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~ 167 (638)
..+++|.|.+..+.. +..++.|||+|-++-+++...+.... .|..
T Consensus 209 ~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~-~~~~------------------------ 263 (353)
T 1kz7_A 209 KLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENG-EGYE------------------------ 263 (353)
T ss_dssp CEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCC-SSCC------------------------
T ss_pred hhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccc-cCCC------------------------
Confidence 478999998643211 22478999999977777655443110 0000
Q ss_pred cCCCCCCccccccceeecccceeecCCCCCCCcceEEEecC--CeeEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006616 168 YHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISP--TKNYTLQAESALDQMDWIEKITGVIASLLS 238 (638)
Q Consensus 168 ~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~--~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~ 238 (638)
..........|.+....|.-..+ +.+++|.|... ..+|+|+|.|+++++.|+++|+.+|.....
T Consensus 264 -----~~~~y~~k~~i~l~~~~v~e~~~--~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~ 329 (353)
T 1kz7_A 264 -----KAPSYSYKQSLNMTAVGITENVK--GDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQLQ 329 (353)
T ss_dssp -----CSCEEEEEEEEEGGGEEEECCBT--TBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCeEEEEEEeEcccceeeEcCC--CCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 00111222345555555442211 23688999864 578999999999999999999999976554
No 213
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.41 E-value=0.0044 Score=65.52 Aligned_cols=117 Identities=18% Similarity=0.180 Sum_probs=69.6
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
...+++|.|.++.. ++.++.|||+|-++-+++..++........ .. . . + .+..+..
T Consensus 255 R~li~eG~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~-----~~---~----~-----~-----~~~~~~~ 310 (385)
T 1txd_A 255 RKMIHEGPLVWKVN--RDKTIDLYTLLLEDILVLLQKQDDRLVLRC-----HS---K----I-----L-----ASTADSK 310 (385)
T ss_dssp SCEEEEEEEEEESS--SSCBCCEEEEEESSEEEEEEEETTEEECCC----------------------------------
T ss_pred ceEEEECcEEEEcC--CCCeEEEEEEecCCeeEEEEecCCeeEEee-----cc---c----c-----c-----cccCCCC
Confidence 35689999987643 246899999999777666554321100000 00 0 0 0 0000112
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEecC---CeeEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIISP---TKNYTLQAESALDQMDWIEKITGVIASLLSS 239 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~---~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~~ 239 (638)
......|.|..+.|+.... +.+.+|.|... .++|+|+|.|+++++.||++|+.+|..+...
T Consensus 311 ~~~~~~i~l~~~~v~~~~~--d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~~ 374 (385)
T 1txd_A 311 HTFSPVIKLSTVLVRQVAT--DNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQ 374 (385)
T ss_dssp -CCCSEEEGGGEEEEECCC---CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceeccccccccccc--CCceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccCC
Confidence 2233456666666653222 33566776642 4789999999999999999999999887655
No 214
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=97.38 E-value=0.00034 Score=66.55 Aligned_cols=96 Identities=21% Similarity=0.390 Sum_probs=59.9
Q ss_pred eeEEEEEEeecCCCCCCceeeEEEEec-----Cc-eEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCC
Q 006616 99 TIRQGYLSKRSSNLRGDWKRRFFVLDS-----RG-MLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGV 172 (638)
Q Consensus 99 ~~k~GyL~Kr~~~~~~~WkrRwfvL~~-----~~-~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 172 (638)
.+.||+...|. .|.||+||+||+. +. .|..|++..++.+|.
T Consensus 9 ~v~eg~vk~r~---~KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~------------------------------ 55 (224)
T 3ml4_A 9 ALVEGQVKLRD---GKKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGL------------------------------ 55 (224)
T ss_dssp CSEEEEEEEC------CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCC------------------------------
T ss_pred eeEEEeeeeec---CCceeeEEEEEEcCCCchheEEEEEEcChhhhhcCC------------------------------
Confidence 46799999884 3579999999986 22 466665543322221
Q ss_pred CCccccccceeeccc-ceeecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHH
Q 006616 173 HDEKSAARHTVNLLT-STIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGV 232 (638)
Q Consensus 173 ~~~~~~~~~~i~l~~-~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~ 232 (638)
..+..+.|.. +.+.....-...++.+.|+..+.+++|.++|++.+.+|-..|+..
T Consensus 56 -----~~KaslsL~~~~GlE~g~~ldk~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 56 -----RERSSLTLEDICGLEPALPYEGLAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp -----CCSEEEEECCEEEEEEEEEETTEEEEEEEEESSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred -----cccceeehHHhcCccccccccCcccEEEEEecCcEEEEEeCCHHHHHHHHHHHhhc
Confidence 1111223311 111111111134799999999999999999999999999887653
No 215
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=97.27 E-value=0.0018 Score=57.52 Aligned_cols=38 Identities=24% Similarity=0.436 Sum_probs=32.4
Q ss_pred CcceEEEecCC--eeEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006616 199 LRFCFRIISPT--KNYTLQAESALDQMDWIEKITGVIASL 236 (638)
Q Consensus 199 rr~cF~I~t~~--rt~~lqA~se~e~~~Wi~ai~~~i~~~ 236 (638)
...||.|+..+ ++..|.|+|++|++.|+.+|+..+...
T Consensus 84 ~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~ 123 (131)
T 1mai_A 84 EDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHS 123 (131)
T ss_dssp GGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred ccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 46899999887 699999999999999999999887543
No 216
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=97.24 E-value=0.0024 Score=65.45 Aligned_cols=103 Identities=18% Similarity=0.197 Sum_probs=66.7
Q ss_pred ceeEEEEEEeecCC-CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 98 QTIRQGYLSKRSSN-LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~-~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
..+.+|-+....+. ..+..+.|||+|-++-+++...+... .+ ...
T Consensus 202 ~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~--~~--------------------------------~~~ 247 (311)
T 1nty_A 202 ELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDS--SG--------------------------------RSK 247 (311)
T ss_dssp CEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECT--TC--------------------------------CEE
T ss_pred CceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccC--CC--------------------------------Cce
Confidence 35678877765432 23467899999997776665443211 00 011
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEec-----CCeeEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIIS-----PTKNYTLQAESALDQMDWIEKITGVIASL 236 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t-----~~rt~~lqA~se~e~~~Wi~ai~~~i~~~ 236 (638)
......|.+..+.|.-..+ +.+++|.|.. +..+|+|+|.|+++++.|+++|+.+|...
T Consensus 248 y~~k~~i~l~~~~v~e~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~ 310 (311)
T 1nty_A 248 YLYKSKLFTSELGVTEHVE--GDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER 310 (311)
T ss_dssp EEEEEEEEGGGEEEECCCT--TCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred eEEeeeeeccceeeEEccC--CCCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence 1223345565555542222 2367899986 34689999999999999999999999753
No 217
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=97.15 E-value=6.3e-05 Score=82.88 Aligned_cols=115 Identities=23% Similarity=0.254 Sum_probs=0.0
Q ss_pred ceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCC-CCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 98 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCS-KSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~-~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
..+++|.|.|. +.++.|||+|-++-+++....+.. ...|.. .+|. ...+ ..-
T Consensus 252 ~li~eG~l~~~-----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~--------------~~f~----~~~~----~~~ 304 (510)
T 3jzy_A 252 KLLHSGKLYKT-----KSNKELHGFLFNDFLLLTYMVKQFAVSSGSE--------------KLFS----SKSN----AQF 304 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEeceEEEc-----CCCcEEEEEcccceeEEeeecccccccCCcc--------------cccC----cccc----cce
Confidence 45788888765 347899999997777665433221 000100 0000 0000 000
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSS 239 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~~ 239 (638)
.+-+..|.|....|....+..+.++||+|.++.++|+|+|.|++|+..||++|+.+|......
T Consensus 305 ~v~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~ 367 (510)
T 3jzy_A 305 KMYKTPIFLNEVLVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYIDT 367 (510)
T ss_dssp ---------------------------------------------------------------
T ss_pred eEEcCceehhheEEeccCCCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 011233555555555332333567999999999999999999999999999999999876544
No 218
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=97.13 E-value=0.0027 Score=66.34 Aligned_cols=106 Identities=13% Similarity=0.176 Sum_probs=64.8
Q ss_pred ceeEEEEEEeecCC----CCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCC
Q 006616 98 QTIRQGYLSKRSSN----LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 173 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~----~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 173 (638)
..+++|-++.+.+. ..+.++.|||+|-++-+++...+.... .|. .
T Consensus 206 ~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~-~~~-----------------------------~- 254 (354)
T 2rgn_B 206 KLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGV-RGG-----------------------------T- 254 (354)
T ss_dssp CEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------------------------------------
T ss_pred cccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCC-CCC-----------------------------C-
Confidence 46788887765332 234688999999977666654432210 000 0
Q ss_pred CccccccceeecccceeecCCCCCCCcceEEEecC-----CeeEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006616 174 DEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISP-----TKNYTLQAESALDQMDWIEKITGVIASL 236 (638)
Q Consensus 174 ~~~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~-----~rt~~lqA~se~e~~~Wi~ai~~~i~~~ 236 (638)
.........|.|....|.-..+ +.+++|.|... ..+|+|+|.|+++++.||++|+.+|...
T Consensus 255 ~~~y~~k~~i~l~~~~v~~~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 320 (354)
T 2rgn_B 255 QPGYVYKNSIKVSCLGLEGNLQ--GDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQ 320 (354)
T ss_dssp -CCEEEEEEEEGGGEEEEESGG--GCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEcceeeccceeeeeccC--CCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 0111223345565555542211 23578999862 3689999999999999999999999653
No 219
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=97.11 E-value=0.0015 Score=68.13 Aligned_cols=34 Identities=21% Similarity=0.434 Sum_probs=30.5
Q ss_pred cceEEEec----CCeeEEEEeCCHHHHHHHHHHHHHHH
Q 006616 200 RFCFRIIS----PTKNYTLQAESALDQMDWIEKITGVI 233 (638)
Q Consensus 200 r~cF~I~t----~~rt~~lqA~se~e~~~Wi~ai~~~i 233 (638)
+++|.|.. +..+|+|+|.|+++++.||++|+.+|
T Consensus 308 ~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 308 KNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp SSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 68999985 35799999999999999999999987
No 220
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=96.92 E-value=0.06 Score=56.48 Aligned_cols=60 Identities=12% Similarity=0.272 Sum_probs=43.3
Q ss_pred cceeecccceeecCCCC-CCCcceEEEe--------cCCeeEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006616 180 RHTVNLLTSTIKVDADQ-SDLRFCFRII--------SPTKNYTLQAESALDQMDWIEKITGVIASLLSS 239 (638)
Q Consensus 180 ~~~i~l~~~~v~~~~~~-~~rr~cF~I~--------t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~~ 239 (638)
...|.|....|...++. .+....|+|. .|.++|+|+|.|++++..||++|+.+|....+.
T Consensus 303 k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~~~ 371 (377)
T 1foe_A 303 RHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHRR 371 (377)
T ss_dssp EEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHhhh
Confidence 45577776666643322 2223458886 356899999999999999999999999776554
No 221
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=96.71 E-value=0.0073 Score=72.07 Aligned_cols=103 Identities=16% Similarity=0.255 Sum_probs=67.6
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCC-CCCCCCccccccCcCcccCCccccccccccCCCCCCc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSK-SSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 175 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~-~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 175 (638)
...+++|.|.+.+++ +.|||+|-++-+++...+.... ..|. . ..
T Consensus 442 r~Li~eG~l~~~~~k-----~~r~~FLF~D~Ll~~K~~~~~~~~~g~-----------------------------~-~~ 486 (1049)
T 3ksy_A 442 NEFIMEGTLTRVGAK-----HERHIFLFDGLMICCKSNHGQPRLPGA-----------------------------S-NA 486 (1049)
T ss_dssp SCCCCEEEEEETTCS-----SCEEEEEETTEEEEEECCTTCCCCTTS-----------------------------C-CC
T ss_pred ceEEEeceEEEEccC-----ceEEEEeeCCeEEEEEecCccCCCCCC-----------------------------C-CC
Confidence 346799999887532 7899999977666654432211 0010 0 01
Q ss_pred cccccceeecccceeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 176 KSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 176 ~~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
.......|.+....|....+....+++|.|...+ .+|+|+|.|++|++.||++|+.+..
T Consensus 487 ~y~~k~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 487 EYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQY 546 (1049)
T ss_dssp SCCCCCEECCSSCCCCCCCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEcCceEEEECCCCccccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 1223344566555555333333457999999876 4999999999999999999987764
No 222
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=95.91 E-value=0.033 Score=62.81 Aligned_cols=97 Identities=19% Similarity=0.386 Sum_probs=57.0
Q ss_pred cceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCcc
Q 006616 97 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 176 (638)
Q Consensus 97 ~~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 176 (638)
..+++.||+.|+++-....|+||+|.|..+++-.+ ... ..+ ..
T Consensus 557 ~~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~-~e~-~~~-----------------------------------~~ 599 (689)
T 3v5w_A 557 KDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWR-GEG-EAP-----------------------------------QS 599 (689)
T ss_dssp SCCCEEEEEEEC-------CEEEEEEEETTEEEEE-CTT-SCC-----------------------------------CE
T ss_pred CcceeecccccCCCcccchhhhhccccCCCccccc-ccC-CCC-----------------------------------cc
Confidence 34679999999966555689999999986554332 111 000 00
Q ss_pred ccccceeecccceeecCCCCCCCcceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006616 177 SAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASL 236 (638)
Q Consensus 177 ~~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~i~~~ 236 (638)
......+. .|. ........||.+...+ ++|.+++.|+.++.+|+..|+.+-...
T Consensus 600 l~~~~~v~----~v~--k~~i~~~~~l~~~~k~~k~f~~~t~~~~~~~~W~~~i~~~~~~~ 654 (689)
T 3v5w_A 600 LLTMEEIQ----SVE--ETQIKERKCLLLKIRGGKQFILQCDSDPELVQWKKELRDAYREA 654 (689)
T ss_dssp EEEGGGEE----EEE--EEESSSCEEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred eeeecccc----ccc--cCcCCCCcceeeeecCCcEEEEECCChHHHHHHHHHHHHHHHHH
Confidence 00001111 111 1122345788888765 889999999999999999999887443
No 223
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=94.89 E-value=0.076 Score=45.93 Aligned_cols=100 Identities=12% Similarity=0.155 Sum_probs=63.2
Q ss_pred ceeEEEEEEeecCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 98 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 98 ~~~k~GyL~Kr~~~~~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
..+++|.+....+. +.=+.||++|-...+|+.... .. .+ ....
T Consensus 9 ~Ll~q~~f~V~~~~--~k~~eR~vFLFe~~ilf~K~~-~~--~~--------------------------------~~~Y 51 (119)
T 1fho_A 9 RIIRHDAFQVWEGD--EPPKLRYVFLFRNKIMFTEQD-AS--TS--------------------------------PPSY 51 (119)
T ss_dssp CSSEEEEEEECSTT--CSCEEEEEEEETTEEEEEEEC-CS--SS--------------------------------SCCC
T ss_pred CccccCceEEEeCC--CCcceEEEEEecCcEEEEEEe-cC--CC--------------------------------CCcE
Confidence 45789999988653 234679999986666665433 11 00 0112
Q ss_pred cccceeecccceeecCCCCCCCcceEEEecCC--eeEEE--EeCCHH-HHHHHHHHHHHHHHH
Q 006616 178 AARHTVNLLTSTIKVDADQSDLRFCFRIISPT--KNYTL--QAESAL-DQMDWIEKITGVIAS 235 (638)
Q Consensus 178 ~~~~~i~l~~~~v~~~~~~~~rr~cF~I~t~~--rt~~l--qA~se~-e~~~Wi~ai~~~i~~ 235 (638)
.-...|.+....+....++ +.+..|+|..+. ..|.+ ||.|.+ ..+.||+.|+..++.
T Consensus 52 ~~K~~ikl~~~~lte~~~~-~d~~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~ 113 (119)
T 1fho_A 52 THYSSIRLDKYNIRQHTTD-EDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEK 113 (119)
T ss_dssp SSCCEEESSSCEEEEECTT-CCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHH
T ss_pred EEeeEEeeceeEEEecCCC-CCCcEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHHH
Confidence 2233455555555533331 235669998876 46888 999999 999999999885544
No 224
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=93.97 E-value=0.083 Score=52.39 Aligned_cols=36 Identities=17% Similarity=0.219 Sum_probs=32.8
Q ss_pred CcceEEEecCC--eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 199 LRFCFRIISPT--KNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 199 rr~cF~I~t~~--rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
++|+|+|.+++ .++.|+|++.+++.+|+.+|+.+|.
T Consensus 225 ~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 225 EPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp SSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred CCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 68999999997 5789999999999999999998873
No 225
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=93.89 E-value=0.11 Score=47.84 Aligned_cols=52 Identities=15% Similarity=0.199 Sum_probs=40.1
Q ss_pred eeecccceeec--CCCCCCCcceEEEecCC--eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006616 182 TVNLLTSTIKV--DADQSDLRFCFRIISPT--KNYTLQAESALDQMDWIEKITGVIA 234 (638)
Q Consensus 182 ~i~l~~~~v~~--~~~~~~rr~cF~I~t~~--rt~~lqA~se~e~~~Wi~ai~~~i~ 234 (638)
.|.|..|-|.. ...+. ++.+|||.+++ .+.+|+|.+..+..+|+++|+..|.
T Consensus 122 ~IPLkMayvtR~~~~tD~-e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 122 HVSLKMAYVSRRCTPTDP-EPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp EEETTTCEEEEECCSSCC-SSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred eecHHHHHHHHhccCCCC-CccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 46666665432 23343 57899999998 4889999999999999999998773
No 226
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=91.72 E-value=4.1 Score=46.40 Aligned_cols=91 Identities=16% Similarity=0.362 Sum_probs=54.2
Q ss_pred eeEEEEEEeecCCC-CCCceeeEEEEecCceEEEEecCCCCCCCCCCccccccCcCcccCCccccccccccCCCCCCccc
Q 006616 99 TIRQGYLSKRSSNL-RGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 177 (638)
Q Consensus 99 ~~k~GyL~Kr~~~~-~~~WkrRwfvL~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 177 (638)
++..|||.....+. +++=|..||||..+.+.+| +...++.
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------------------------------- 580 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWY-KDDEEKE-------------------------------------- 580 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEE-SSTTCCC--------------------------------------
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccc-cchhhhc--------------------------------------
Confidence 88999999876554 4578899999997766665 4322211
Q ss_pred cccceeecccceeecC-CCCCCCcceEEEecCC--------eeEEEEeCCHHHHHHHHHHH
Q 006616 178 AARHTVNLLTSTIKVD-ADQSDLRFCFRIISPT--------KNYTLQAESALDQMDWIEKI 229 (638)
Q Consensus 178 ~~~~~i~l~~~~v~~~-~~~~~rr~cF~I~t~~--------rt~~lqA~se~e~~~Wi~ai 229 (638)
....+.|....++-. ..-..+++.|.|..+. +...|.|++.++.+.|...+
T Consensus 581 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 640 (772)
T 3zvr_A 581 -KKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASF 640 (772)
T ss_dssp -EEEEEECTTEEEEEC-------CEEEEEEETTSSCSBTTBSEEEEEESSHHHHHHHHHHH
T ss_pred -ccccccccccccchhhhccccccccccccCCccccccchhhhhhhhccccccchhhHHhh
Confidence 011122222222210 0011356888888764 46789999999999998765
No 227
>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A
Probab=75.16 E-value=1.6 Score=30.61 Aligned_cols=37 Identities=30% Similarity=0.680 Sum_probs=30.0
Q ss_pred CCcccccCCCCC-CCceecccceeEeccchhhhccCCC
Q 006616 317 GNDRCADCGAPE-PDWASLNLGVLVCIECSGVHRNLGV 353 (638)
Q Consensus 317 ~n~~c~dC~~~~-p~w~~~~~g~~~C~~Csg~hr~lg~ 353 (638)
....|.+|+... |.|-.-.-|..||-.|.--++.-|+
T Consensus 3 ~~~~C~~C~tt~Tp~WR~gp~G~~LCNaCGl~~k~~~~ 40 (46)
T 1gnf_A 3 EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQ 40 (46)
T ss_dssp CSCCCTTTCCCCCSSCBCCTTCCCBCSHHHHHHHHTCS
T ss_pred CCCCCCCcCCCCCCcCccCCCCCccchHHHHHHHHcCC
Confidence 457899999975 8999999999999999776655443
No 228
>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*
Probab=70.17 E-value=2.1 Score=29.60 Aligned_cols=34 Identities=24% Similarity=0.534 Sum_probs=27.8
Q ss_pred cccccCCCCC-CCceecccceeEeccchhhhccCC
Q 006616 319 DRCADCGAPE-PDWASLNLGVLVCIECSGVHRNLG 352 (638)
Q Consensus 319 ~~c~dC~~~~-p~w~~~~~g~~~C~~Csg~hr~lg 352 (638)
..|.+|+... |.|-.-..|..+|-.|.--.|.-|
T Consensus 2 ~~C~~C~tt~Tp~WR~gp~G~~LCNaCGl~~k~~~ 36 (43)
T 2vut_I 2 TTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHG 36 (43)
T ss_dssp CCCSSSCCCCCSCCEECTTSCEECHHHHHHHHHHS
T ss_pred CcCCccCCCCCCccccCCCCCcccHHHHHHHHHhC
Confidence 4799999975 799999999999999976555433
No 229
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=69.03 E-value=16 Score=41.94 Aligned_cols=37 Identities=8% Similarity=0.094 Sum_probs=30.6
Q ss_pred cceEEEecCC-----eeEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006616 200 RFCFRIISPT-----KNYTLQAESALDQMDWIEKITGVIASL 236 (638)
Q Consensus 200 r~cF~I~t~~-----rt~~lqA~se~e~~~Wi~ai~~~i~~~ 236 (638)
..||.|+... +++.|.|.|+++.+.|+..|+..+...
T Consensus 96 ~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~ 137 (799)
T 2zkm_X 96 LKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKHP 137 (799)
T ss_dssp GTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHCT
T ss_pred cceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 4689998754 257899999999999999999877654
No 230
>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*
Probab=67.41 E-value=2.9 Score=31.77 Aligned_cols=36 Identities=25% Similarity=0.557 Sum_probs=29.5
Q ss_pred CCcccccCCCC-CCCceecccceeEeccchhhhccCC
Q 006616 317 GNDRCADCGAP-EPDWASLNLGVLVCIECSGVHRNLG 352 (638)
Q Consensus 317 ~n~~c~dC~~~-~p~w~~~~~g~~~C~~Csg~hr~lg 352 (638)
+...|..|+.. -|.|-.-.-|..||-.|--..+.-|
T Consensus 8 ~~~~C~~C~t~~Tp~WR~gp~G~~LCNaCGl~~~~~~ 44 (66)
T 4gat_A 8 GPTTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHG 44 (66)
T ss_dssp SSCCCTTTCCCCCSSCEEETTTEEECHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCcCCcCCCCCCccHHHHHHHHHcC
Confidence 56899999997 4899999999999999966555433
No 231
>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*
Probab=65.09 E-value=2.3 Score=32.01 Aligned_cols=36 Identities=22% Similarity=0.436 Sum_probs=29.9
Q ss_pred CCcccccCCCCC-CCceecccceeEeccchhhhccCC
Q 006616 317 GNDRCADCGAPE-PDWASLNLGVLVCIECSGVHRNLG 352 (638)
Q Consensus 317 ~n~~c~dC~~~~-p~w~~~~~g~~~C~~Csg~hr~lg 352 (638)
....|.+|+... |.|-.-..|-.||-.|.-..+.-|
T Consensus 6 ~~~~C~~C~tt~Tp~WR~gp~G~~LCNACGl~~~~~~ 42 (63)
T 3dfx_A 6 AGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHN 42 (63)
T ss_dssp TTCCCTTTCCSCCSSCCCCTTSCCCCHHHHHHHHHHS
T ss_pred CCCcCCCcCCCCCCccCCCCCCCchhhHHHHHHHHcC
Confidence 467899999975 899999999999999976665544
No 232
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=64.16 E-value=17 Score=41.63 Aligned_cols=38 Identities=24% Similarity=0.262 Sum_probs=30.6
Q ss_pred cceEEEecCCe-----eEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006616 200 RFCFRIISPTK-----NYTLQAESALDQMDWIEKITGVIASLL 237 (638)
Q Consensus 200 r~cF~I~t~~r-----t~~lqA~se~e~~~Wi~ai~~~i~~~~ 237 (638)
..||.|+...+ ...|.|.++++.+.|++.|+..+....
T Consensus 103 ~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~~~~ 145 (816)
T 3qr0_A 103 DKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAYNLL 145 (816)
T ss_dssp HHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHTCHH
T ss_pred ccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHHHHH
Confidence 47899998652 348999999999999999988775443
No 233
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=64.06 E-value=11 Score=43.50 Aligned_cols=38 Identities=13% Similarity=0.172 Sum_probs=31.4
Q ss_pred cceEEEecCCe-----eEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006616 200 RFCFRIISPTK-----NYTLQAESALDQMDWIEKITGVIASLL 237 (638)
Q Consensus 200 r~cF~I~t~~r-----t~~lqA~se~e~~~Wi~ai~~~i~~~~ 237 (638)
..||.|+.... +..|.|.++++.+.|+..|+..+...+
T Consensus 100 ~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~~~ 142 (885)
T 3ohm_B 100 EKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMNIL 142 (885)
T ss_dssp TTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHCHH
T ss_pred ccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhhhh
Confidence 57899998642 588999999999999999988776553
No 234
>1u5k_A Hypothetical protein; OBD-fold, Zn-binding, recombination,replication; 2.00A {Deinococcus radiodurans} SCOP: b.40.4.13 g.45.1.2 PDB: 1w3s_A 2v1c_C
Probab=62.93 E-value=5.8 Score=38.41 Aligned_cols=50 Identities=28% Similarity=0.643 Sum_probs=37.7
Q ss_pred cCCcccccCCCCCCCceecccceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHH
Q 006616 316 CGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAF 383 (638)
Q Consensus 316 ~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~ 383 (638)
|.-..|+.||.+...|.+...|.++|..|...+ ..+++.+..|+.+-+..
T Consensus 148 p~l~~C~~cg~~~~~~fs~~~Gg~~c~~~~~~~------------------~l~~~~l~~l~~l~~~~ 197 (244)
T 1u5k_A 148 PQTARCARCGAPDPEHPDPLGGQLLCSKCAALP------------------PYPPAVLDFLRHAVRRT 197 (244)
T ss_dssp CCCSBCTTTCCBSCCEECTTTSSEECTTTCSSC------------------CCCHHHHHHHHHTTTSC
T ss_pred CCcCccccCCCCCCCcEecccCEEECcccCCCC------------------CCCHHHHHHHHHHHhCC
Confidence 455789999999667889999999999996422 14678888887765443
No 235
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=61.57 E-value=24 Score=24.56 Aligned_cols=40 Identities=15% Similarity=0.208 Sum_probs=33.0
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 006616 13 ELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKR 52 (638)
Q Consensus 13 ~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 52 (638)
|-...|+.-++.+++.+.....+++..+.+|.+++..+..
T Consensus 5 ekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE~ 44 (46)
T 3swy_A 5 EKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLES 44 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3457788899999999999999999998888888876543
No 236
>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}
Probab=52.92 E-value=3.4 Score=31.88 Aligned_cols=35 Identities=23% Similarity=0.581 Sum_probs=28.2
Q ss_pred CcccccCCCCC-CCcee--cccceeEeccchhhhccCCC
Q 006616 318 NDRCADCGAPE-PDWAS--LNLGVLVCIECSGVHRNLGV 353 (638)
Q Consensus 318 n~~c~dC~~~~-p~w~~--~~~g~~~C~~Csg~hr~lg~ 353 (638)
...|..|+... |.|-. -.-| .||-.|.--.|..|+
T Consensus 8 ~~~C~nC~tt~Tp~WRrg~~~~g-~LCNACGl~~~~~~~ 45 (71)
T 2kae_A 8 SFQCSNCSVTETIRWRNIRSKEG-IQCNACFIYQRKYNK 45 (71)
T ss_dssp CCCCSSSCCSCCSSCCCCSSSSC-CCSSHHHHHHHHHHS
T ss_pred CCcCCccCCCCCCccccCCCCCC-ccchHHHHHHHHhCC
Confidence 47899999975 89998 6777 899999877776554
No 237
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=52.02 E-value=43 Score=25.77 Aligned_cols=44 Identities=16% Similarity=0.198 Sum_probs=36.5
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhh
Q 006616 13 ELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQIDR 56 (638)
Q Consensus 13 ~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 56 (638)
+-+..|+.-++.|++.+.....+++..+.+|.+++..+..++-.
T Consensus 7 EKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~~~~ 50 (74)
T 3swf_A 7 EKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKP 50 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34578888999999999999999999999999998777666543
No 238
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=47.93 E-value=7.4 Score=33.05 Aligned_cols=35 Identities=31% Similarity=0.748 Sum_probs=28.2
Q ss_pred CcccccCCCC-CCCceecccceeEeccchhhhccCC
Q 006616 318 NDRCADCGAP-EPDWASLNLGVLVCIECSGVHRNLG 352 (638)
Q Consensus 318 n~~c~dC~~~-~p~w~~~~~g~~~C~~Csg~hr~lg 352 (638)
...|++||+. -|.|-.-.-|-++|-.|--.++.-|
T Consensus 5 ~~~C~~Cg~~~Tp~WRr~~~g~~lCnaCgl~~Kl~G 40 (115)
T 4hc9_A 5 GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNG 40 (115)
T ss_dssp -CCCTTTCCSCCSSCEECTTSCEECHHHHHHHHHHS
T ss_pred CCCCCCCCCccCCcceECCCCCCcCcchhhhhhhcc
Confidence 3689999987 5999999999999999976665433
No 239
>1tjl_A DNAK suppressor protein; DKSA, transcription factor, RNA polymerase, stringent response, PPGPP, riken structural genomics/proteomics initiative; 2.00A {Escherichia coli} SCOP: a.2.14.1 g.39.1.13 PDB: 3h3p_S
Probab=46.62 E-value=5.6 Score=35.57 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=24.9
Q ss_pred cCCcccccCCCCCCC-ceecccceeEeccchhhhc
Q 006616 316 CGNDRCADCGAPEPD-WASLNLGVLVCIECSGVHR 349 (638)
Q Consensus 316 ~~n~~c~dC~~~~p~-w~~~~~g~~~C~~Csg~hr 349 (638)
+.-..|.+||.+-|. -.-..-++..|+.|...+-
T Consensus 109 g~yg~C~~Cg~~Ip~~Rl~a~P~a~~Ci~Cq~~~E 143 (151)
T 1tjl_A 109 EDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 (151)
T ss_dssp TCCSBCSSSSCBCCHHHHHHCTTCCSCHHHHHHHH
T ss_pred CCCceeCCCCCcchHHHHhcCCCcchhHHHHHHHH
Confidence 467899999998662 2233457899999988663
No 240
>3g9m_A Glucocorticoid receptor; glucocorticoid, DNA-binding, allostery, lever ARM, transcription, hormone; HET: DNA; 1.61A {Rattus norvegicus} SCOP: g.39.1.2 PDB: 3g6p_A* 3g6q_B* 3g6r_B* 3g6u_A* 3g8u_A* 3g8x_A* 3g97_B* 3g99_A* 3g9i_A* 3g9j_A* 3fyl_A* 3g9o_B* 3g9p_B* 3g6t_A* 1r4o_A 1r4r_A 1glu_A* 1gdc_A 2gda_A 1rgd_A ...
Probab=43.81 E-value=9.9 Score=30.74 Aligned_cols=30 Identities=27% Similarity=0.638 Sum_probs=24.5
Q ss_pred CCcccccCCCCCCCceecccceeEeccchhhhc
Q 006616 317 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHR 349 (638)
Q Consensus 317 ~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr 349 (638)
|+..|.-||.+.- ...|||+.|-.|.+..|
T Consensus 1 g~~~C~VCg~~a~---g~hyGv~sC~~Ck~FFR 30 (90)
T 3g9m_A 1 GSHMCLVCSDEAS---GCHYGVLTCGSCKVFFK 30 (90)
T ss_dssp -CCBCTTTCSBCC---EEETTEEECHHHHHHHH
T ss_pred CCCcCccCCCcCc---ccccCCccchhHhHHhh
Confidence 5678999997643 46899999999999876
No 241
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=39.58 E-value=2e+02 Score=26.64 Aligned_cols=32 Identities=13% Similarity=0.321 Sum_probs=27.0
Q ss_pred ceEEEecCC-eeEEEEeCCHHHHHHHHHHHHHH
Q 006616 201 FCFRIISPT-KNYTLQAESALDQMDWIEKITGV 232 (638)
Q Consensus 201 ~cF~I~t~~-rt~~lqA~se~e~~~Wi~ai~~~ 232 (638)
..|.|+... .++.|.|.|+.+...|+..|+.-
T Consensus 116 laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~L 148 (203)
T 3a98_B 116 LAFSILYDSNCQLNFIAPDKHEYCIWTDGLNAL 148 (203)
T ss_dssp GEEEEEETTTEEEEEECSSHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCceEEEecCCHHHHHHHHHHHHHH
Confidence 578888654 68999999999999999988743
No 242
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=36.83 E-value=17 Score=30.88 Aligned_cols=38 Identities=21% Similarity=0.421 Sum_probs=31.2
Q ss_pred cCCcccccCCCCC-CCceecccceeEeccchhhhccCCC
Q 006616 316 CGNDRCADCGAPE-PDWASLNLGVLVCIECSGVHRNLGV 353 (638)
Q Consensus 316 ~~n~~c~dC~~~~-p~w~~~~~g~~~C~~Csg~hr~lg~ 353 (638)
.....|++|+... |.|-.-+.|..||-.|--..+..|+
T Consensus 57 ~~~~~C~~C~t~~tp~WRr~~~g~~lCNaCgl~~~~~~~ 95 (115)
T 4hc9_A 57 RAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNI 95 (115)
T ss_dssp CTTCCCTTTCCSCCSSCEECTTSCEECHHHHHHHHHHSS
T ss_pred cccccCCCcCCCCcceeEECCCCCCcchHHHHHHHHhCC
Confidence 3468999999975 9999999999999999776665444
No 243
>1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A
Probab=36.67 E-value=10 Score=31.99 Aligned_cols=32 Identities=19% Similarity=0.401 Sum_probs=24.7
Q ss_pred CCcccccCCCCCCCc-eecccceeEeccchhhh
Q 006616 317 GNDRCADCGAPEPDW-ASLNLGVLVCIECSGVH 348 (638)
Q Consensus 317 ~n~~c~dC~~~~p~w-~~~~~g~~~C~~Csg~h 348 (638)
....|.+||...-+| ..-+||+.||-.|....
T Consensus 4 ~~~~C~eC~~~~~d~~l~~~F~~~VC~~Cr~~~ 36 (111)
T 1d4u_A 4 DYVICEECGKEFMDSYLMDHFDLPTCDDCRDAD 36 (111)
T ss_dssp CCEECTTTCCEESCSSSTTTTSCCCCTTTCSSS
T ss_pred CCCccccCCChhhHHHHHHhCCeeechhhcccc
Confidence 456799999975433 35699999999998753
No 244
>1hcq_A Protein (estrogen receptor); protein-DNA complex, complexed with drug, transcription/DNA complex; HET: DNA; 2.40A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hcp_A 4aa6_A
Probab=36.67 E-value=17 Score=28.91 Aligned_cols=31 Identities=23% Similarity=0.544 Sum_probs=25.5
Q ss_pred CCcccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 317 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 317 ~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
....|.-||.+.. ...|||+.|..|.+..|-
T Consensus 3 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 33 (84)
T 1hcq_A 3 ETRYCAVCNDYAS---GYHYGVWSCEGCKAFFKR 33 (84)
T ss_dssp CCCBCTTTCSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCCcCcEECCCCC---CeeeCccchHHhhhhhhh
Confidence 4578999997643 568999999999998884
No 245
>1r4i_A Androgen receptor; AR, steroid receptor, protein-DNA complex, transcription/DNA complex; 3.10A {Rattus norvegicus} SCOP: g.39.1.2
Probab=35.72 E-value=14 Score=30.70 Aligned_cols=32 Identities=22% Similarity=0.530 Sum_probs=25.7
Q ss_pred cCCcccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 316 CGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 316 ~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
+....|.-||.+. ....|||+.|..|.+..|-
T Consensus 5 ~~~~~C~VCg~~a---~g~hyGv~sC~aCk~FFRR 36 (105)
T 1r4i_A 5 PPQKTCLICGDEA---SGAHYGALTCGSCKVFFKR 36 (105)
T ss_dssp -CCCBCSSSCSBE---EEEETTEEEEHHHHHHHHH
T ss_pred CCCCCCcEeCCCC---CceEeCCcchhhhhhhhce
Confidence 4567899999753 3568999999999998874
No 246
>2kgo_A Uncharacterized protein YBII; Zn finger, partially disordered, structural proteomics, META binding, zinc-finger, structural genomics; NMR {Escherichia coli}
Probab=35.16 E-value=4.1 Score=34.16 Aligned_cols=33 Identities=36% Similarity=0.777 Sum_probs=24.1
Q ss_pred CCcccccCCCCCCC-ceecccceeEeccchhhhc
Q 006616 317 GNDRCADCGAPEPD-WASLNLGVLVCIECSGVHR 349 (638)
Q Consensus 317 ~n~~c~dC~~~~p~-w~~~~~g~~~C~~Csg~hr 349 (638)
.-..|.+||.+-|. -.-..-++..|++|...+-
T Consensus 55 syG~C~~CGe~Ip~~RL~A~P~a~~Cv~Cq~~~E 88 (108)
T 2kgo_A 55 SLDECEECGAPIPQARREAIPGVRLCIHCQQEKD 88 (108)
T ss_dssp CCSBCTTTCCBCCHHHHHHSTTCCSCHHHHHHHH
T ss_pred cCceecccCCcccHHHHhcCCCccccHHHHHHHH
Confidence 35899999998652 2233457899999998654
No 247
>2nll_B Protein (thyroid hormone receptor); complex (transcription regulation/DNA), DNA-binding, nuclear protein, zinc- finger, multigene family; HET: DNA 5IU; 1.90A {Homo sapiens} SCOP: g.39.1.2 PDB: 3m9e_A*
Probab=34.04 E-value=15 Score=30.52 Aligned_cols=29 Identities=24% Similarity=0.702 Sum_probs=23.9
Q ss_pred cccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 319 DRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 319 ~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
..|.-||.+.. ...|||+.|..|.+..|-
T Consensus 2 ~~C~VCgd~a~---g~hyGv~sC~aCk~FFRR 30 (103)
T 2nll_B 2 ELCVVCGDKAT---GYHYRCITCEGCKGFFRR 30 (103)
T ss_dssp CBCTTTCSBCC---SEETTEECCHHHHHHHHH
T ss_pred CCCeEeCCcCc---CeecCcccHHHhhhhhee
Confidence 57999997643 468999999999998874
No 248
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=33.09 E-value=22 Score=26.10 Aligned_cols=28 Identities=21% Similarity=0.340 Sum_probs=19.3
Q ss_pred cccccCCCCCCCceecccceeEeccchhh
Q 006616 319 DRCADCGAPEPDWASLNLGVLVCIECSGV 347 (638)
Q Consensus 319 ~~c~dC~~~~p~w~~~~~g~~~C~~Csg~ 347 (638)
..|.+|+.....+ ...-|.++|..|--|
T Consensus 12 ~~Cp~C~~~~lv~-D~~~ge~vC~~CGlV 39 (58)
T 1dl6_A 12 VTCPNHPDAILVE-DYRAGDMICPECGLV 39 (58)
T ss_dssp CSBTTBSSSCCEE-CSSSCCEECTTTCCE
T ss_pred ccCcCCCCCceeE-eCCCCeEEeCCCCCE
Confidence 4799999865322 335689999999433
No 249
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=33.08 E-value=2.1e+02 Score=28.17 Aligned_cols=38 Identities=16% Similarity=0.251 Sum_probs=31.8
Q ss_pred ceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006616 201 FCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSS 239 (638)
Q Consensus 201 ~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~~ 239 (638)
--|.|.. +|.|+.+|.+.+|++.+|..|-......+..
T Consensus 186 ~gF~LTl-~K~YyW~A~s~kER~~FI~sLvKiy~KYtgG 223 (320)
T 3a58_A 186 EGFILTM-SKKYYWETNSAKERTVFIKSLITLYIQTFEG 223 (320)
T ss_dssp TEEEEES-SSEEEEEESSHHHHHHHHHHHHHHHHHHTTT
T ss_pred CceEEEe-CCceEEecCCHHHHHHHHHHHHHHHHHHcCC
Confidence 4587776 9999999999999999999998877666543
No 250
>2ebl_A COUP transcription factor 1; DNA-binding, metal-binding, nuclear protein, receptor, transcription regulation, zinc, EAR3, erbal3 tfcoup1; NMR {Homo sapiens}
Probab=32.98 E-value=16 Score=29.36 Aligned_cols=31 Identities=19% Similarity=0.576 Sum_probs=25.5
Q ss_pred CCcccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 317 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 317 ~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
.+..|.-||.+.. ...|||+.|..|.+..|-
T Consensus 6 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 36 (89)
T 2ebl_A 6 SGIECVVCGDKSS---GKHYGQFTCEGCKSFFKR 36 (89)
T ss_dssp SSCBCTTTCSBCC---SEETTEECCHHHHHHHHH
T ss_pred CCCCCcEeCCCCc---ceEeCchhhHHhhhhhhe
Confidence 4578999997654 458999999999998874
No 251
>2han_B Ecdysone receptor; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2 PDB: 1r0o_B 1r0n_B
Probab=31.26 E-value=20 Score=30.54 Aligned_cols=31 Identities=26% Similarity=0.671 Sum_probs=25.6
Q ss_pred CCcccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 317 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 317 ~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
.+..|.-||.+.- ...|||+.|..|.++.|-
T Consensus 7 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 37 (119)
T 2han_B 7 QEELCLVCGDRAS---GYHYNALTCEGCKGFFRR 37 (119)
T ss_dssp CSCBCTTTCSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCCcCeEeCCcCC---cceECchhHHhhHHhhhh
Confidence 3578999997643 568999999999998884
No 252
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=30.83 E-value=26 Score=28.62 Aligned_cols=28 Identities=32% Similarity=0.694 Sum_probs=22.9
Q ss_pred cCCcccccCCCCCCC-ceecc--cceeEecc
Q 006616 316 CGNDRCADCGAPEPD-WASLN--LGVLVCIE 343 (638)
Q Consensus 316 ~~n~~c~dC~~~~p~-w~~~~--~g~~~C~~ 343 (638)
+....|.+|++..+. |+++. .|-+-|.+
T Consensus 23 ~~~~~C~~C~~~~~~lw~CL~~~Cg~vgCgr 53 (97)
T 2uzg_A 23 KSLGTCQDCKVQGPNLWACLENRCSYVGCGE 53 (97)
T ss_dssp HTTTCCSSSCCCCSSCEEECCTTCCCEECCT
T ss_pred CCCCcCcCcCCCCCCceeeecccCCCcccCC
Confidence 456789999976655 99998 99999965
No 253
>2han_A Protein ultraspiracle; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2
Probab=30.67 E-value=21 Score=28.94 Aligned_cols=31 Identities=26% Similarity=0.680 Sum_probs=25.0
Q ss_pred CCcccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 317 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 317 ~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
....|.-||.+.- ...|||+.|..|.+..|-
T Consensus 9 ~~~~C~VCgd~a~---g~hyGv~sC~aCk~FFRR 39 (93)
T 2han_A 9 SKHLCSICGDRAS---GKHYGVYSCEGCKGFFKR 39 (93)
T ss_dssp -CCBCTTTCSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCCCCcEeCCCCc---CeecCcchhHHHHHHHHh
Confidence 3468999997643 568999999999998873
No 254
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=29.29 E-value=1e+02 Score=26.13 Aligned_cols=36 Identities=17% Similarity=0.345 Sum_probs=29.5
Q ss_pred cceEEEecC------CeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006616 200 RFCFRIISP------TKNYTLQAESALDQMDWIEKITGVIAS 235 (638)
Q Consensus 200 r~cF~I~t~------~rt~~lqA~se~e~~~Wi~ai~~~i~~ 235 (638)
+.-|.|+.. .+.|.|.|.|++|..+=|..|+..++.
T Consensus 74 P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ik~~~~~ 115 (121)
T 3ulb_A 74 PEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTRLQNLLSA 115 (121)
T ss_dssp TTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHHHHHHHHH
Confidence 455777652 278999999999999999999988854
No 255
>4glq_A Methyl-accepting chemotaxis protein; chromophore, phytochrome, cyanobacteriochrome, phycoviolobil bilin, BILI-protein; HET: PVN; 1.77A {Thermosynechococcus elongatus} PDB: 4fof_A*
Probab=28.65 E-value=38 Score=30.42 Aligned_cols=41 Identities=17% Similarity=0.245 Sum_probs=32.6
Q ss_pred cceeEeccchhhhccCCCccceeEEeecCCCccCHHHHHHHHHhchHHHHHHHHhhhcc
Q 006616 336 LGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQS 394 (638)
Q Consensus 336 ~g~~~C~~Csg~hr~lg~~~skvrsl~ld~~~~~~~~~~~~~~~gN~~~n~i~e~~~~~ 394 (638)
+|++.|..|..-+ .|++++++++..+++..+-+|--+.+-.
T Consensus 119 ~GlL~~~~~~~~r------------------~w~~~ei~ll~~lA~ql~iAi~qa~l~~ 159 (171)
T 4glq_A 119 FGLLIAHQASEPR------------------QWQEIEIDQFSELASTGSLVLERLHFLE 159 (171)
T ss_dssp EEEEEEEEESSCC------------------CCCHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEEEEEEeCCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899998886533 5999999999999999998887776644
No 256
>2a66_A Orphan nuclear receptor NR5A2; protein-DNA complex, zinc finger, DNA- binding domain, transcription factor, FTZ-F1, C-terminal extension; 2.20A {Homo sapiens} PDB: 2ff0_A
Probab=28.19 E-value=20 Score=30.25 Aligned_cols=32 Identities=25% Similarity=0.660 Sum_probs=24.3
Q ss_pred cCCcccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 316 CGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 316 ~~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
+.+..|.-||.+. ....|||+.|..|.+..|-
T Consensus 7 ~~~~~C~VCgd~a---~G~HyGv~sC~aCk~FFRR 38 (113)
T 2a66_A 7 DLEELCPVCGDKV---SGYHYGLLTCESCKGFFKR 38 (113)
T ss_dssp ---CBCTTTCCBE---EEEETTEEEEHHHHHHHHH
T ss_pred CCCCCCcEeCCCC---cceeeCcccHHHHHHHHhh
Confidence 3457899999653 3568999999999998874
No 257
>1ynw_B Retinoic acid receptor RXR-alpha, retinoid X receptor; VDR, nuclear receptor, protein-DNA complex, transcripti complex; 3.00A {Homo sapiens} SCOP: g.39.1.2
Probab=27.01 E-value=22 Score=29.25 Aligned_cols=30 Identities=30% Similarity=0.712 Sum_probs=23.5
Q ss_pred CcccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 318 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 318 n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
...|.-||.+.- ...|||+.|..|.+..|-
T Consensus 3 ~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 32 (99)
T 1ynw_B 3 KHICAICGDRSS---GKHYGVYSCEGCKGFFKR 32 (99)
T ss_dssp --CBTTTBSCCC---BCCTTSCBCSHHHHHHHH
T ss_pred CCCCceeCCCCc---ceeeCccchHHHHHHHHh
Confidence 357999997643 468999999999998874
No 258
>1a6y_A Orphan nuclear receptor NR1D1; orphan receptor, DNA-binding, reverb, REV- ERB, transcription regulation, transcription/DNA complex; HET: DNA 5IU; 2.30A {Homo sapiens} SCOP: g.39.1.2 PDB: 1ga5_A* 1hlz_A
Probab=26.34 E-value=26 Score=28.52 Aligned_cols=30 Identities=33% Similarity=0.723 Sum_probs=24.3
Q ss_pred CcccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 318 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 318 n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
...|.-||.+.. ...|||+.|..|.+..|-
T Consensus 7 ~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 36 (94)
T 1a6y_A 7 VLLCKVCGDVAS---GFHYGVLACEGCKGFFRR 36 (94)
T ss_dssp -CBCTTTSSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCcCcEeCCCCc---ceEeCccchhhhhhehhe
Confidence 467999997653 568999999999998874
No 259
>1cit_A NGFI-B, protein (orphan nuclear receptor NGFI-B); early immediate response gene product, transcription factor, monomeric protein-DNA complex; HET: DNA; 2.70A {Rattus norvegicus} SCOP: g.39.1.2
Probab=25.82 E-value=29 Score=27.87 Aligned_cols=28 Identities=36% Similarity=0.829 Sum_probs=22.8
Q ss_pred ccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 320 RCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 320 ~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
.|.-||.+.- ...|||+.|..|.+..|-
T Consensus 2 ~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 29 (89)
T 1cit_A 2 RCAVCGDNAS---CQHYGVRTCEGCKGFFKR 29 (89)
T ss_dssp CCSSSCCCCC---EEETTEEECHHHHHHHHH
T ss_pred CCeEeCCCCc---ceEeCccchhhhhhhcee
Confidence 5888987543 568999999999998873
No 260
>1dsz_B RXR-alpha, retinoic acid receptor RXR-alpha; RAR, nuclear receptor, protein-DNA, transcription/DNA complex; HET: DNA; 1.70A {Homo sapiens} SCOP: g.39.1.2 PDB: 1by4_A* 1rxr_A 1r0n_A 1r0o_A 2nll_A*
Probab=25.74 E-value=17 Score=28.95 Aligned_cols=31 Identities=29% Similarity=0.678 Sum_probs=25.0
Q ss_pred CCcccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 317 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 317 ~n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
.+..|.-||.+.. ...|||+.|..|.+..|-
T Consensus 4 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 34 (85)
T 1dsz_B 4 TKHICAICGDRSS---GKHYGVYSCEGCKGFFKR 34 (85)
T ss_dssp CCEECTTTCCEES---SEETTEECCHHHHHHHHH
T ss_pred CCCCCCEeCCCCC---ceeeCccchHHHHHHHHH
Confidence 4567999997643 458999999999998873
No 261
>1kb2_A Vitamin D3 receptor; VDR, nuclear receptor, protein-DNA complex, transcription/DNA complex; 2.70A {Homo sapiens} SCOP: g.39.1.2 PDB: 1kb4_A 1kb6_A 1ynw_A
Probab=25.54 E-value=24 Score=29.60 Aligned_cols=29 Identities=24% Similarity=0.730 Sum_probs=24.2
Q ss_pred cccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 319 DRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 319 ~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
..|.-||.+.- ...|||+.|..|.+..|-
T Consensus 7 ~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 35 (110)
T 1kb2_A 7 RICGVCGDRAT---GFHFNAMTCEGCKGFFRR 35 (110)
T ss_dssp CBCTTTCSBCC---SEETTEECCHHHHHHHHH
T ss_pred CCCcEeCCCCC---ceEeCchhHhhhhhhhee
Confidence 67999997653 458999999999998884
No 262
>1dsz_A RAR-alpha, retinoic acid receptor alpha; RAR, nuclear receptor, protein-DNA, transcription/DNA complex; HET: DNA; 1.70A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hra_A
Probab=25.51 E-value=24 Score=28.13 Aligned_cols=29 Identities=28% Similarity=0.654 Sum_probs=23.3
Q ss_pred cccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 319 DRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 319 ~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
..|.-||.+.. ...|||+.|..|.+..|-
T Consensus 5 ~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 33 (86)
T 1dsz_A 5 KPCFVCQDKSS---GYHYGVSACEGCKGFFRR 33 (86)
T ss_dssp -CCTTTCSCCC---SEETTEECCHHHHHHHHH
T ss_pred CCCcEECCCcc---ceeeCchhHHHHHHHHHH
Confidence 46999997653 458999999999998873
No 263
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=25.03 E-value=1.2e+02 Score=27.50 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=31.1
Q ss_pred cceEEEecCCeeEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006616 200 RFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLS 238 (638)
Q Consensus 200 r~cF~I~t~~rt~~lqA~se~e~~~Wi~ai~~~i~~~~~ 238 (638)
.--|.|.. +|.|+.+|++.+|+..+|..|-........
T Consensus 115 ~~gF~ltl-~K~Y~W~a~s~~Er~~FI~sL~K~y~ky~~ 152 (171)
T 3hie_A 115 SEGFILTM-SKKYYWETNSAKERTVFIKSLITLYIQTFE 152 (171)
T ss_dssp TTEEEEES-SSEEEEECSSHHHHHHHHHHHHHHHHHTSC
T ss_pred CCcEEEEe-CCeEEEecCCHHHHHHHHHHHHHHHHHHcC
Confidence 44588777 799999999999999999998877665543
No 264
>1lo1_A Steroid hormone receptor ERR2; estrogen related receptor 2, DNA binding domain, HERR2, hormone nuclear receptor; NMR {Homo sapiens} SCOP: g.39.1.2
Probab=24.90 E-value=20 Score=29.48 Aligned_cols=30 Identities=23% Similarity=0.607 Sum_probs=24.6
Q ss_pred CcccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 318 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 318 n~~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
...|.-||.+.. ...|||+.|..|.+..|-
T Consensus 4 ~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 33 (98)
T 1lo1_A 4 KRLCLVCGDIAS---GYHYGVASCEACKAFFKR 33 (98)
T ss_dssp CCEETTTTEECS---EESSSSEECHHHHHHHHH
T ss_pred CCCCcEeCCCCc---CeeeCccchhhhhhhhee
Confidence 357999997653 568999999999998884
No 265
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=22.58 E-value=42 Score=28.99 Aligned_cols=28 Identities=25% Similarity=0.555 Sum_probs=23.6
Q ss_pred cCCcccccCCCCCCCceecccceeEecc
Q 006616 316 CGNDRCADCGAPEPDWASLNLGVLVCIE 343 (638)
Q Consensus 316 ~~n~~c~dC~~~~p~w~~~~~g~~~C~~ 343 (638)
|....|.+|+...--|+++..|-+-|..
T Consensus 32 ~~~~~C~~C~~~~~LwlCL~CG~vgCgr 59 (129)
T 2g45_A 32 PCGWKCSKCDMRENLWLNLTDGSILCGR 59 (129)
T ss_dssp CCBCCCSSSSCCSSEEEETTTCCEEECC
T ss_pred CCCCcCccccCcCceEEeccCCccccCc
Confidence 4567899999998889999988888865
No 266
>2kq9_A DNAK suppressor protein; zinc binding protein, structural genomics, PSI-2, protein ST initiative; NMR {Agrobacterium tumefaciens str}
Probab=22.39 E-value=15 Score=30.89 Aligned_cols=32 Identities=19% Similarity=0.353 Sum_probs=22.9
Q ss_pred ccCCcccccCCCCCCC-ceecccceeEeccchh
Q 006616 315 VCGNDRCADCGAPEPD-WASLNLGVLVCIECSG 346 (638)
Q Consensus 315 ~~~n~~c~dC~~~~p~-w~~~~~g~~~C~~Csg 346 (638)
.+.-..|.+||.+-|. -.-..-++..|++|..
T Consensus 78 ~g~yg~C~~Cg~~I~~~Rl~a~P~a~~Ci~Cq~ 110 (112)
T 2kq9_A 78 SGTFGTCVKCGKRISEDRLKAVPYTPFCQECAA 110 (112)
T ss_dssp HTCCSEETTTTEECCHHHHHHCSCCSSCHHHHH
T ss_pred CCCcCeeCCCCCcccHHHHhcCCCcchhHHHHh
Confidence 3678899999998652 1223347889999975
No 267
>3cbb_A HNF-4-alpha, hepatocyte nuclear factor 4-alpha, DNA binding domain, nuclear; zinc finger; 2.00A {Homo sapiens}
Probab=21.41 E-value=34 Score=26.72 Aligned_cols=28 Identities=32% Similarity=0.692 Sum_probs=22.7
Q ss_pred ccccCCCCCCCceecccceeEeccchhhhcc
Q 006616 320 RCADCGAPEPDWASLNLGVLVCIECSGVHRN 350 (638)
Q Consensus 320 ~c~dC~~~~p~w~~~~~g~~~C~~Csg~hr~ 350 (638)
.|.-||.+.. ...||++.|..|.+..|-
T Consensus 2 ~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 29 (78)
T 3cbb_A 2 LCAICGDRAT---GKHYGASSCDGCKGFFRR 29 (78)
T ss_dssp BCTTTSSBCC---SEETTEECCHHHHHHHHH
T ss_pred CCeEeCCCCC---ceEeCCcchhhhceeeeE
Confidence 4888987644 458999999999998873
No 268
>3j21_d 50S ribosomal protein L34E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.35 E-value=27 Score=28.02 Aligned_cols=32 Identities=28% Similarity=0.555 Sum_probs=21.7
Q ss_pred HcccCCcccccCCCCC-------CC----------ceecccceeEeccch
Q 006616 313 RRVCGNDRCADCGAPE-------PD----------WASLNLGVLVCIECS 345 (638)
Q Consensus 313 ~~~~~n~~c~dC~~~~-------p~----------w~~~~~g~~~C~~Cs 345 (638)
.+.+.-..|+|||.+- |. -++-.|| .+|..|-
T Consensus 28 KK~~~~pkC~~cg~~L~Gi~~~Rp~~~~rlsK~~KtvsRaYG-~lC~~Cv 76 (89)
T 3j21_d 28 RKKPKIAHCAMCGRPLNGIPRGRPVEMRKLPKTKKRPERPMP-HLCPRCM 76 (89)
T ss_dssp CCCCCCCBCSSSCCBCTTCCCCCTTGGGGSCHHHHCCSSSCT-TSCHHHH
T ss_pred cccCCCCCCCCCCCccCCccCccHHHHHhcccCCCCcCCCcc-cchHHHH
Confidence 3455556899999852 21 2355699 9999984
No 269
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=20.71 E-value=2.1e+02 Score=23.22 Aligned_cols=42 Identities=10% Similarity=0.210 Sum_probs=29.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 006616 11 GYELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKR 52 (638)
Q Consensus 11 G~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 52 (638)
.+.+-++|...+..|...|..+....+.|.+.|.++++.+..
T Consensus 27 shQVQqELs~tfarLc~~Vd~t~~eL~~EI~~L~~eI~~LE~ 68 (96)
T 1t3j_A 27 SHQVQQEMATTFARLCQQVDMTQKHLEEEIARLSKEIDQLEK 68 (96)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567888899999999999999999999999998877544
Done!