Your job contains 1 sequence.
>006619
MENSPVTVITSSEEEKEEGNGSKEKNIERGVAAKSKLDEYKEISDLTGFDNLKAMILAES
IMKRKKKRNRKKKKKDKTKLDSLYREVADLTGFENLKAMIEAEAPMRRKSSERMRGNLET
QFCAQENDTVNVAEEQGQLGEDDGLNKVEETERNGREEKRRRANRAKLDEYEKISDLSGF
DNLKAMIEAEAFMRRKKRNRKRKKREIEFCGQEDVSVSAEEEKGQLDKSQPLKVVEVSKP
ESVLTTEMDGSRHLFIDPAKDNEGASMGEPMPMVRVVGGNDGGNSFEVIDLCLSSTDDDK
SVSGVSLERSVEDMGKAVQTTATITGANDGVKSVEMNNLYSLRLEDDKPLSDMRLGRRVE
DTVSVGPIVGERQQKKRRKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRYFDPPGW
NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP
GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK
QVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLL
FTAERPPTRARHFVGSNGTPHGLGNAQGRENDDQREKG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006619
(638 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079859 - symbol:AT3G43590 species:3702 "Arabi... 516 1.5e-49 1
TAIR|locus:2183607 - symbol:AT5G36240 species:3702 "Arabi... 259 1.6e-21 1
UNIPROTKB|B4DP17 - symbol:CNBP "cDNA FLJ61146, highly sim... 229 2.9e-18 1
ZFIN|ZDB-GENE-030131-7782 - symbol:cnbpb "CCHC-type zinc ... 221 2.2e-17 1
ZFIN|ZDB-GENE-030131-5045 - symbol:cnbpa "CCHC-type zinc ... 212 2.0e-16 1
UNIPROTKB|E2RPD7 - symbol:CNBP "Uncharacterized protein" ... 211 2.6e-16 1
UNIPROTKB|F8WFK2 - symbol:Cnbp "Cellular nucleic acid-bin... 211 2.6e-16 1
ASPGD|ASPL0000028407 - symbol:AN5111 species:162425 "Emer... 211 2.6e-16 1
UNIPROTKB|Q3T0Q6 - symbol:CNBP "Cellular nucleic acid-bin... 210 3.3e-16 1
UNIPROTKB|P62633 - symbol:CNBP "Cellular nucleic acid-bin... 209 4.3e-16 1
UNIPROTKB|Q4R501 - symbol:Q4R501 "Brain cDNA, clone: QnpA... 209 4.3e-16 1
UNIPROTKB|Q5R5R5 - symbol:CNBP "Cellular nucleic acid-bin... 209 4.3e-16 1
RGD|621807 - symbol:Cnbp "CCHC-type zinc finger, nucleic ... 209 4.3e-16 1
UNIPROTKB|P62634 - symbol:Cnbp "Cellular nucleic acid-bin... 209 4.3e-16 1
UNIPROTKB|F1N8C2 - symbol:CNBP "Cellular nucleic acid-bin... 209 4.3e-16 1
MGI|MGI:88431 - symbol:Cnbp "cellular nucleic acid bindin... 204 1.5e-15 1
UNIPROTKB|O42395 - symbol:CNBP "Cellular nucleic acid-bin... 204 1.5e-15 1
TAIR|locus:2135139 - symbol:CSDP1 "cold shock domain prot... 209 6.4e-15 1
CGD|CAL0002417 - symbol:GIS2 species:5476 "Candida albica... 194 1.8e-14 1
UNIPROTKB|Q59YJ9 - symbol:GIS2 "Putative uncharacterized ... 194 1.8e-14 1
UNIPROTKB|G4N4A8 - symbol:MGG_05948 "Zinc knuckle domain-... 185 1.7e-13 1
SGD|S000005199 - symbol:GIS2 "Translational activator for... 180 5.8e-13 1
UNIPROTKB|G3MZ41 - symbol:ZCCHC13 "Uncharacterized protei... 179 7.5e-13 1
POMBASE|SPAC13D6.02c - symbol:byr3 "zinc finger protein B... 177 1.2e-12 1
TAIR|locus:2827810 - symbol:CSP3 "cold shock domain prote... 187 4.8e-12 1
FB|FBgn0034802 - symbol:CG3800 species:7227 "Drosophila m... 165 2.4e-11 1
UNIPROTKB|J9NRQ2 - symbol:ZCCHC13 "Uncharacterized protei... 162 5.1e-11 1
DICTYBASE|DDB_G0293328 - symbol:DDB_G0293328 "Cellular nu... 162 5.1e-11 1
UNIPROTKB|F1NI84 - symbol:CNBP "Cellular nucleic acid-bin... 159 1.1e-10 1
UNIPROTKB|Q8WW36 - symbol:ZCCHC13 "Zinc finger CCHC domai... 150 9.9e-10 1
TAIR|locus:2156647 - symbol:AT5G52380 species:3702 "Arabi... 159 5.5e-09 1
UNIPROTKB|G4MRA3 - symbol:MGG_13778 "Zinc finger protein ... 151 1.9e-08 1
ASPGD|ASPL0000040986 - symbol:AN9093 species:162425 "Emer... 151 2.2e-08 1
WB|WBGene00019537 - symbol:K08D12.3 species:6239 "Caenorh... 135 4.1e-08 1
TAIR|locus:2098164 - symbol:AT3G43490 species:3702 "Arabi... 144 8.9e-08 2
TAIR|locus:2005719 - symbol:AT1G75560 species:3702 "Arabi... 142 4.6e-07 1
ZFIN|ZDB-GENE-030102-2 - symbol:zcchc7 "zinc finger, CCHC... 144 5.9e-07 3
MGI|MGI:1916335 - symbol:Zcchc9 "zinc finger, CCHC domain... 133 6.2e-06 1
UNIPROTKB|Q8N567 - symbol:ZCCHC9 "Zinc finger CCHC domain... 131 1.0e-05 1
POMBASE|SPAC683.02c - symbol:SPAC683.02c "zf-CCHC type zi... 126 1.8e-05 1
UNIPROTKB|E1BZR6 - symbol:ZCCHC9 "Uncharacterized protein... 127 1.8e-05 1
UNIPROTKB|F1ML79 - symbol:ZCCHC9 "Uncharacterized protein... 128 2.2e-05 1
UNIPROTKB|F6V033 - symbol:ZCCHC9 "Uncharacterized protein... 127 2.9e-05 1
ZFIN|ZDB-GENE-031030-9 - symbol:zcchc9 "zinc finger, CCHC... 126 3.2e-05 1
RGD|1307450 - symbol:Zcchc9 "zinc finger, CCHC domain con... 125 4.9e-05 1
TAIR|locus:2078526 - symbol:AT3G42860 species:3702 "Arabi... 127 5.9e-05 1
UNIPROTKB|P05960 - symbol:gag-pol "Gag-Pol polyprotein" s... 129 6.8e-05 1
UNIPROTKB|F1RF07 - symbol:ZCCHC9 "Uncharacterized protein... 123 8.2e-05 1
UNIPROTKB|P12498 - symbol:gag-pol "Gag-Pol polyprotein" s... 128 8.3e-05 1
UNIPROTKB|Q22Z19 - symbol:TTHERM_00115500 "Putative uncha... 132 8.4e-05 1
ZFIN|ZDB-GENE-030131-755 - symbol:si:dkeyp-113d7.1 "si:dk... 124 0.00020 1
WB|WBGene00017210 - symbol:F07E5.5 species:6239 "Caenorha... 122 0.00022 1
WB|WBGene00043995 - symbol:F40F12.9 species:6239 "Caenorh... 100 0.00024 1
UNIPROTKB|Q23JG1 - symbol:TTHERM_00979960 "Putative uncha... 122 0.00039 1
UNIPROTKB|F1ST82 - symbol:ZCCHC7 "Uncharacterized protein... 121 0.00050 1
ASPGD|ASPL0000046912 - symbol:AN1944 species:162425 "Emer... 112 0.00060 2
WB|WBGene00001601 - symbol:glh-4 species:6239 "Caenorhabd... 123 0.00079 1
UNIPROTKB|Q9H1U4 - symbol:MEGF9 "Multiple epidermal growt... 119 0.00094 1
>TAIR|locus:2079859 [details] [associations]
symbol:AT3G43590 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:AL391734 EMBL:AY099824 EMBL:BT002203
IPI:IPI00517919 RefSeq:NP_189945.1 UniGene:At.36254
ProteinModelPortal:Q9FYD1 SMR:Q9FYD1 IntAct:Q9FYD1 PRIDE:Q9FYD1
EnsemblPlants:AT3G43590.1 GeneID:823456 KEGG:ath:AT3G43590
TAIR:At3g43590 HOGENOM:HOG000071063 InParanoid:Q9FYD1 OMA:RECPNSS
PhylomeDB:Q9FYD1 ProtClustDB:CLSN2684404 ArrayExpress:Q9FYD1
Genevestigator:Q9FYD1 Uniprot:Q9FYD1
Length = 551
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 126/314 (40%), Positives = 167/314 (53%)
Query: 297 DDDKSVSGVSL---ERSVE--DMGKAVQTTATITGANDGVKSVEMNNLYSLRLEDDKPLS 351
DDD++ +SL E+++ D+G + + + ++ GV S M N +++ +
Sbjct: 36 DDDEANEDLSLKILEKALSRRDVGNKLDSDLS---SDSGVVSTVMVNGVKSKVKKSESSK 92
Query: 352 DMRLGRRVEDTVSVGPIVGEXXXXXXXXXXXVI-EAKD-KVE--DARKENEAKYNVVLRM 407
M+ + +E + PIV V E +D +VE D K E N+VL+
Sbjct: 93 KMKRNK-LEADHEI-PIVWNDQDEEKVVEEIVKGEGEDDEVERSDEPKTEETASNLVLKK 150
Query: 408 LLRKPRYFDPP--GWNSETCSNCGKENHTAATCKMQ-KQNKPCFLCGSFKHRWKNCKQGQ 464
LLR RYFDPP GW S C +CG++ HT+ C K+ KPCF+CGS +H K C +G
Sbjct: 151 LLRGARYFDPPDAGWVS--CYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCSKGH 208
Query: 465 DCFINKGSEHLASDCPGTDQGNNLSSN-FCLRCGDSGHDLSSCEGEYHADDLKKIQCYIC 523
DC+I K + H A DCP D+ N S CLRCGD GHD+ C+ EY +DLK +QCYIC
Sbjct: 209 DCYICKKTGHRAKDCP--DKYKNGSKGAVCLRCGDFGHDMILCKYEYSKEDLKDVQCYIC 266
Query: 524 KSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKS----NLI------- 572
KSFGHLCCV VSCY CGQ GH G C E N S L
Sbjct: 267 KSFGHLCCVEPGNSLSWAVSCYRCGQLGHSGLACGRHYEESNENDSATPERLFNSREASE 326
Query: 573 CYKCGKEGHFARRC 586
CY+CG+EGHFAR C
Sbjct: 327 CYRCGEEGHFAREC 340
Score = 210 (79.0 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 65/228 (28%), Positives = 99/228 (43%)
Query: 425 CSNCGKENHTAATC--KMQKQNKP--CFLCGSFKHRWKNCK---QGQD-----CFINKGS 472
C C K H A C K + +K C CG F H CK +D C+I K
Sbjct: 210 CYICKKTGHRAKDCPDKYKNGSKGAVCLRCGDFGHDMILCKYEYSKEDLKDVQCYICKSF 269
Query: 473 EHLASDCPGTDQGNNLS-SNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
HL C + GN+LS + C RCG GH +C G ++ + + + F
Sbjct: 270 GHLC--C--VEPGNSLSWAVSCYRCGQLGHSGLAC-GRHYEESNENDSATPERLF----- 319
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCE--ALNGKKSNLICYKCGKEGHFARRCGSN 589
NS + CY CG+ GH EC NS +G++S +CY+C GHFAR C ++
Sbjct: 320 -NSR----EASECYRCGEEGHFARECPNSSSISTSHGRESQTLCYRCNGSGHFARECPNS 374
Query: 590 FKDRLRISDLLFTAERPPTRARHFVGSNGTPHGLGNAQGRENDDQREK 637
+ R + T+ + + + + TPH + G+ +++K
Sbjct: 375 SQVSKRDRETSTTSHKSRKKNKENSEHDSTPH---ESNGKTKKKKKKK 419
>TAIR|locus:2183607 [details] [associations]
symbol:AT5G36240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AB026661
IPI:IPI00533303 RefSeq:NP_198473.1 UniGene:At.55159
ProteinModelPortal:Q9FG62 SMR:Q9FG62 PaxDb:Q9FG62 PRIDE:Q9FG62
EnsemblPlants:AT5G36240.1 GeneID:833621 KEGG:ath:AT5G36240
TAIR:At5g36240 eggNOG:NOG310171 HOGENOM:HOG000152454
InParanoid:Q9FG62 OMA:EGHFEHQ PhylomeDB:Q9FG62
ProtClustDB:CLSN2916402 Genevestigator:Q9FG62 Uniprot:Q9FG62
Length = 254
Score = 259 (96.2 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 45/105 (42%), Positives = 61/105 (58%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCY 545
N+ + CLRCG GHD++ C+ EY +DLK I+CY+C S GHLCC+ VSCY
Sbjct: 21 NDDEAEVCLRCGGFGHDMTLCKYEYSHEDLKNIKCYVCNSLGHLCCIEPGHTQSWTVSCY 80
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNF 590
CGQ GH G C + + C+ CG+EGHF +C ++F
Sbjct: 81 RCGQLGHTGLACGRHYD----DSVSPSCFICGREGHFEHQCHNSF 121
>UNIPROTKB|B4DP17 [details] [associations]
symbol:CNBP "cDNA FLJ61146, highly similar to Cellular
nucleic acid-binding protein" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 HOVERGEN:HBG000397 EMBL:AC108673 EMBL:AC135587
UniGene:Hs.518249 HGNC:HGNC:13164 ChiTaRS:CNBP EMBL:AK298154
IPI:IPI00977873 SMR:B4DP17 STRING:B4DP17 Ensembl:ENST00000500450
UCSC:uc011bku.2 Uniprot:B4DP17
Length = 160
Score = 229 (85.7 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 56/176 (31%), Positives = 77/176 (43%)
Query: 421 NSETCSNCGKENHTAATCK--------MQKQNKP-CFLCGSFKHRWKNCKQGQDCFINKG 471
+S C CG+ H A C M+ + + C+ CG H K+C +D N G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDACYNCG 61
Query: 472 -SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC 530
H+A DC + C CG GH C+ HAD+ K CY C FGH
Sbjct: 62 RGGHIAKDCK---EPKREREQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGH-- 110
Query: 531 CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +V CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 111 -IQKDCT---KVKCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 154
Score = 162 (62.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 36/103 (34%), Positives = 50/103 (48%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-GEYHADDLK---KIQCYICKSFGHLCCVNSSIIGLKQVS 543
+SSN C +CG SGH C G ++ + CY C GHL + L++ +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHL----AKDCDLQEDA 56
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 CYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 94
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 72 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 129
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
A +C T + N C RCG+SGH C
Sbjct: 130 AINCSKTSEVN------CYRCGESGHLAREC 154
>ZFIN|ZDB-GENE-030131-7782 [details] [associations]
symbol:cnbpb "CCHC-type zinc finger, nucleic acid
binding protein b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
ZFIN:ZDB-GENE-030131-7782 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
InterPro:IPR025836 Pfam:PF14392 EMBL:CR855375 IPI:IPI00862287
Ensembl:ENSDART00000104520 Bgee:E7FCQ0 Uniprot:E7FCQ0
Length = 243
Score = 221 (82.9 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 54/177 (30%), Positives = 80/177 (45%)
Query: 421 NSETCSNCGKENHTAATC--------KMQKQNKP--CFLCGSFKHRWKNCKQGQDCFINK 470
+S C CG+ H C K + + K C+ CG H ++C++ +D N
Sbjct: 84 SSNECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTEDACYNC 143
Query: 471 G-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
G H++ DC + C CG +GH C+ HA++ K CY C FGH+
Sbjct: 144 GRGGHISRDCK---EPKKEREQVCYNCGKAGHMARDCD---HANEQK---CYSCGGFGHI 194
Query: 530 CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G ++V CY CG+ GH+ +C+ K S + CY CGK GH A+ C
Sbjct: 195 QK------GCEKVKCYRCGEIGHVAVQCS--------KASEVNCYNCGKSGHVAKEC 237
Score = 157 (60.3 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 36/110 (32%), Positives = 52/110 (47%)
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCE--GEYHADDL---KKIQCYICKSFGHLC--CVNSSI 536
+ ++SSN C CG +GH + +C G K + CY C GH+ C +
Sbjct: 79 KSEDMSSNECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERT-- 136
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +CYNCG+ GH+ +C K+ +CY CGK GH AR C
Sbjct: 137 ----EDACYNCGRGGHISRDCKEP-----KKEREQVCYNCGKAGHMARDC 177
Score = 132 (51.5 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 29/91 (31%), Positives = 39/91 (42%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K C++ + C+ H+
Sbjct: 155 EPKKEREQVCYNCGKAGHMARDCDHANEQK-CYSCGGFGHIQKGCEKVK-CYRCGEIGHV 212
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
A C + N C CG SGH C
Sbjct: 213 AVQCSKASEVN------CYNCGKSGHVAKEC 237
>ZFIN|ZDB-GENE-030131-5045 [details] [associations]
symbol:cnbpa "CCHC-type zinc finger, nucleic acid
binding protein a" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0060322 "head development" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP] [GO:0014036
"neural crest cell fate specification" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
ZFIN:ZDB-GENE-030131-5045 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0003697 GO:GO:0051216 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 HOVERGEN:HBG000397 GO:GO:0060322 GO:GO:0014036
InterPro:IPR025836 Pfam:PF14392 EMBL:AY228240 IPI:IPI00481422
UniGene:Dr.31379 STRING:Q801Z9 InParanoid:Q801Z9
ArrayExpress:Q801Z9 Uniprot:Q801Z9
Length = 163
Score = 212 (79.7 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 53/177 (29%), Positives = 80/177 (45%)
Query: 421 NSETCSNCGKENHTAATC--------KMQKQNKP--CFLCGSFKHRWKNCKQGQD-CFIN 469
++ C CG+ H C + + + K C+ CG H ++C+Q +D C+
Sbjct: 4 STSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNC 63
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
S H++ DC + C CG +GH C+ HA++ K CY C FGH
Sbjct: 64 HRSGHISRDCK---EPKKEREQCCYNCGKAGHVARDCD---HANEQK---CYSCGGFGHF 114
Query: 530 CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +V CY CG+ GH+ +C+ + E +N CY CGK GH AR C
Sbjct: 115 QKL------CDKVKCYRCGEIGHVAVQCSKATE-VN-------CYNCGKTGHLARDC 157
Score = 179 (68.1 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 44/144 (30%), Positives = 64/144 (44%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLASDC 479
C CG++ H A C+ + C+ C H ++CK+ + C N G H+A DC
Sbjct: 40 CYRCGEQGHIARDCEQTED--ACYNCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDC 97
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
D N C CG GH C+ K++CY C GH+ S
Sbjct: 98 ---DHANEQK---CYSCGGFGHFQKLCD---------KVKCYRCGEIGHVAVQCSKAT-- 140
Query: 540 KQVSCYNCGQSGHLGPECANSCEA 563
+V+CYNCG++GHL +C+ A
Sbjct: 141 -EVNCYNCGKTGHLARDCSIEASA 163
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 35/107 (32%), Positives = 50/107 (46%)
Query: 487 NLSSNFCLRCGDSGHDLSSC----EGEYHADDL-KKIQCYICKSFGHLC--CVNSSIIGL 539
++S++ C CG SGH + +C G K + CY C GH+ C +
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQT----- 56
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +CYNC +SGH+ +C K+ CY CGK GH AR C
Sbjct: 57 -EDACYNCHRSGHISRDCKEP-----KKEREQCCYNCGKAGHVARDC 97
Score = 123 (48.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 30/97 (30%), Positives = 40/97 (41%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K C + + C+ H+
Sbjct: 75 EPKKEREQCCYNCGKAGHVARDCDHANEQK-CYSCGGFGHFQKLCDKVK-CYRCGEIGHV 132
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA 512
A C + N C CG +GH C E A
Sbjct: 133 AVQCSKATEVN------CYNCGKTGHLARDCSIEASA 163
Score = 120 (47.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 33/120 (27%), Positives = 48/120 (40%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKP--CFLCGSFKHRWKNCKQG--QDCFINKGSEHLASD 478
+ C NC + H + CK K+ + C+ CG H ++C Q C+ G H
Sbjct: 58 DACYNCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQKL 117
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSS 535
C D+ C RCG+ GH C ++ CY C GHL C + +S
Sbjct: 118 C---DKVK------CYRCGEIGHVAVQCS------KATEVNCYNCGKTGHLARDCSIEAS 162
>UNIPROTKB|E2RPD7 [details] [associations]
symbol:CNBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000047065 OMA:CPNGQGG EMBL:AAEX03012021
UniGene:Cfa.4499 ProteinModelPortal:E2RPD7 PRIDE:E2RPD7
Ensembl:ENSCAFT00000006937 NextBio:20852160 Uniprot:E2RPD7
Length = 179
Score = 211 (79.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 48/140 (34%), Positives = 66/140 (47%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ + C+ CG H K+CK+ + C N G HLA
Sbjct: 52 DICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 111
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH C K++CY C GH+ +N S
Sbjct: 112 DCDHADEQK------CYSCGEFGHIQKDCT---------KVKCYRCGETGHVA-INCS-- 153
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 154 KTSEVNCYRCGESGHLAREC 173
Score = 202 (76.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 49/144 (34%), Positives = 66/144 (45%)
Query: 447 CFLCGSFKHRWKNCKQGQD---CFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHD 502
C+ CG H K+C +D C+ N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDVEACY-NCGRGGHIAKDCK---EPKREREQCCYNCGKPGHL 109
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCE 562
C+ HAD+ K CY C FGH + +V CY CG++GH+ C+
Sbjct: 110 ARDCD---HADEQK---CYSCGEFGH---IQKDCT---KVKCYRCGETGHVAINCS---- 153
Query: 563 ALNGKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 154 ----KTSEVNCYRCGESGHLAREC 173
Score = 160 (61.4 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 43/143 (30%), Positives = 65/143 (45%)
Query: 447 CFLCGSFKHRWKNCKQGQDC---FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
CF CG H + C G ++G SD G ++ + C RCG+SGH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSD-RGFQFVSSSLPDICYRCGESGHLA 64
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C+ + +D++ CY C GH+ ++ CYNCG+ GHL +C ++ E
Sbjct: 65 KDCDLQ---EDVEA--CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADE- 118
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
+K CY CG+ GH + C
Sbjct: 119 ---QK----CYSCGEFGHIQKDC 134
Score = 147 (56.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 40/121 (33%), Positives = 57/121 (47%)
Query: 386 AKDKVEDARKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNK 445
AKD D +++ EA YN + K +P + C NCGK H A C + K
Sbjct: 64 AKDC--DLQEDVEACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDCDHADEQK 120
Query: 446 PCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG F H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 121 -CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGHLARE 172
Query: 506 C 506
C
Sbjct: 173 C 173
Score = 145 (56.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 41/127 (32%), Positives = 57/127 (44%)
Query: 465 DCFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSCEG-EYHADDLKKIQCYI 522
+CF S H A +CP G +G + S G G +S G ++ + L I CY
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSR-----GRGG--FTSDRGFQFVSSSLPDI-CYR 56
Query: 523 CKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
C GHL C + + +CYNCG+ GH+ +C ++ CY CGK
Sbjct: 57 CGESGHLAKDCDLQEDV-----EACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKP 106
Query: 580 GHFARRC 586
GH AR C
Sbjct: 107 GHLARDC 113
Score = 120 (47.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/107 (31%), Positives = 49/107 (45%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYN 546
+SSN C +CG SGH C G ++ S V+SS+ + CY
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI----CYR 56
Query: 547 CGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
CG+SGHL A C+ ++ CY CG+ GH A+ C ++R
Sbjct: 57 CGESGHL----AKDCDLQEDVEA---CYNCGRGGHIAKDCKEPKRER 96
>UNIPROTKB|F8WFK2 [details] [associations]
symbol:Cnbp "Cellular nucleic acid-binding protein"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
RGD:621807 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
IPI:IPI00201505 ProteinModelPortal:F8WFK2 SMR:F8WFK2
Ensembl:ENSRNOT00000013884 Uniprot:F8WFK2
Length = 179
Score = 211 (79.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 48/140 (34%), Positives = 66/140 (47%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ + C+ CG H K+CK+ + C N G HLA
Sbjct: 52 DICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 111
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH C K++CY C GH+ +N S
Sbjct: 112 DCDHADEQK------CYSCGEFGHIQKDCT---------KVKCYRCGETGHVA-INCS-- 153
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 154 KTSEVNCYRCGESGHLAREC 173
Score = 202 (76.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 49/144 (34%), Positives = 66/144 (45%)
Query: 447 CFLCGSFKHRWKNCKQGQD---CFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHD 502
C+ CG H K+C +D C+ N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDVEACY-NCGRGGHIAKDCK---EPKREREQCCYNCGKPGHL 109
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCE 562
C+ HAD+ K CY C FGH + +V CY CG++GH+ C+
Sbjct: 110 ARDCD---HADEQK---CYSCGEFGH---IQKDCT---KVKCYRCGETGHVAINCS---- 153
Query: 563 ALNGKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 154 ----KTSEVNCYRCGESGHLAREC 173
Score = 160 (61.4 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 43/143 (30%), Positives = 65/143 (45%)
Query: 447 CFLCGSFKHRWKNCKQGQDC---FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
CF CG H + C G ++G SD G ++ + C RCG+SGH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSD-RGFQFVSSSLPDICYRCGESGHLA 64
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C+ + +D++ CY C GH+ ++ CYNCG+ GHL +C ++ E
Sbjct: 65 KDCDLQ---EDVEA--CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADE- 118
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
+K CY CG+ GH + C
Sbjct: 119 ---QK----CYSCGEFGHIQKDC 134
Score = 147 (56.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 40/121 (33%), Positives = 57/121 (47%)
Query: 386 AKDKVEDARKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNK 445
AKD D +++ EA YN + K +P + C NCGK H A C + K
Sbjct: 64 AKDC--DLQEDVEACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDCDHADEQK 120
Query: 446 PCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG F H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 121 -CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGHLARE 172
Query: 506 C 506
C
Sbjct: 173 C 173
Score = 145 (56.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 41/127 (32%), Positives = 57/127 (44%)
Query: 465 DCFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSCEG-EYHADDLKKIQCYI 522
+CF S H A +CP G +G + S G G +S G ++ + L I CY
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSR-----GRGG--FTSDRGFQFVSSSLPDI-CYR 56
Query: 523 CKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
C GHL C + + +CYNCG+ GH+ +C ++ CY CGK
Sbjct: 57 CGESGHLAKDCDLQEDV-----EACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKP 106
Query: 580 GHFARRC 586
GH AR C
Sbjct: 107 GHLARDC 113
Score = 120 (47.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/107 (31%), Positives = 49/107 (45%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYN 546
+SSN C +CG SGH C G ++ S V+SS+ + CY
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI----CYR 56
Query: 547 CGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
CG+SGHL A C+ ++ CY CG+ GH A+ C ++R
Sbjct: 57 CGESGHL----AKDCDLQEDVEA---CYNCGRGGHIAKDCKEPKRER 96
>ASPGD|ASPL0000028407 [details] [associations]
symbol:AN5111 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0000747 "conjugation with
cellular fusion" evidence=IEA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:BN001305 Gene3D:4.10.60.10
SUPFAM:SSF57756 OMA:FQFMSSS EnsemblFungi:CADANIAT00003095
Uniprot:C8VEX3
Length = 171
Score = 211 (79.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 51/181 (28%), Positives = 76/181 (41%)
Query: 420 WNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK---QGQDCFINKGSEHLA 476
+ C NCG+ H A C +K C+ CG H + C + + C+ H++
Sbjct: 3 FGGRVCFNCGEATHQARDCP-KKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGAVGHIS 61
Query: 477 SDCPGTDQGNN-LSSNFCLRCGDSGHDLSSCE--GEYHAD-----DLKKIQCYICKSFGH 528
+CP + C +CG GH +C G Y ++ CY C FGH
Sbjct: 62 RECPQAGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGH 121
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+ G K CYNCG++GH+ +C EA K +CY+C + GH C +
Sbjct: 122 MA--RDCTQGQK---CYNCGETGHVSRDCPT--EA----KGERVCYQCKQPGHIQSACPN 170
Query: 589 N 589
N
Sbjct: 171 N 171
Score = 171 (65.3 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 49/158 (31%), Positives = 69/158 (43%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ---------GQDC 466
D P + TC NCG + H + C + + K C+ CG+ H + C Q GQ+C
Sbjct: 20 DCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGAVGHISRECPQAGENERPAGGQEC 79
Query: 467 FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYH-ADDLKKIQ-CYICK 524
+ H+A +C QG + F G SC G H A D + Q CY C
Sbjct: 80 YKCGRVGHIARNC---SQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTQGQKCYNCG 136
Query: 525 SFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
GH+ C + G ++V CY C Q GH+ C N+
Sbjct: 137 ETGHVSRDCPTEAK-G-ERV-CYQCKQPGHIQSACPNN 171
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 48/159 (30%), Positives = 70/159 (44%)
Query: 447 CFLCGSFKHRWKNC-KQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLS 504
CF CG H+ ++C K+G C+ G H++ +C + + C RCG GH
Sbjct: 8 CFNCGEATHQARDCPKKGTPTCYNCGGQGHVSRECTVAPKEKS-----CYRCGAVGHISR 62
Query: 505 SCE--GEYHADDLKKIQCYICKSFGHL---CCVNSSI-------IGLKQVSCYNCGQSGH 552
C GE + +CY C GH+ C S G +Q +CY+CG GH
Sbjct: 63 ECPQAGENERPAGGQ-ECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGH 121
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK 591
+ +C G+K CY CG+ GH +R C + K
Sbjct: 122 MARDCTQ------GQK----CYNCGETGHVSRDCPTEAK 150
>UNIPROTKB|Q3T0Q6 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9913 "Bos taurus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
OMA:FQFMSSS EMBL:BC102298 IPI:IPI00697831 RefSeq:NP_001029396.1
UniGene:Bt.9541 ProteinModelPortal:Q3T0Q6 STRING:Q3T0Q6
PRIDE:Q3T0Q6 Ensembl:ENSBTAT00000016130 GeneID:504831
KEGG:bta:504831 CTD:7555 GeneTree:ENSGT00510000047065
HOVERGEN:HBG000397 InParanoid:Q3T0Q6 OrthoDB:EOG45HRZN
NextBio:20866851 Uniprot:Q3T0Q6
Length = 170
Score = 210 (79.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 57/186 (30%), Positives = 78/186 (41%)
Query: 421 NSETCSNCGKENHTAATCK--------MQKQNK---------P--CFLCGSFKHRWKNCK 461
+S C CG+ H A C M+ + + P C+ CG H K+C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 462 QGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
+D N G H+A DC + C CG GH C+ HAD+ K C
Sbjct: 62 LQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARDCD---HADEQK---C 112
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
Y C FGH + +V CY CG++GH+ C+ K S + CY+CG+ G
Sbjct: 113 YSCGEFGH---IQKDCT---KVKCYRCGETGHVAINCS--------KTSEVNCYRCGESG 158
Query: 581 HFARRC 586
H AR C
Sbjct: 159 HLAREC 164
Score = 149 (57.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/114 (33%), Positives = 52/114 (45%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----EG----------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG SGH C G ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 104
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 82 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 139
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
A +C T + N C RCG+SGH C
Sbjct: 140 AINCSKTSEVN------CYRCGESGHLAREC 164
>UNIPROTKB|P62633 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006695 "cholesterol biosynthetic process" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
EMBL:CH471052 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0006695 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250 CTD:7555
HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:M28372 EMBL:U19765
EMBL:AY329622 EMBL:AK054592 EMBL:DQ092367 EMBL:DQ091187
EMBL:AK314380 EMBL:BT019613 EMBL:AC108673 EMBL:AC135587
EMBL:BC000288 EMBL:BC014911 EMBL:BC093058 IPI:IPI00430812
IPI:IPI00430813 IPI:IPI00430814 IPI:IPI00895911 IPI:IPI00967344
PIR:A32760 RefSeq:NP_001120665.1 RefSeq:NP_001120666.1
RefSeq:NP_001120668.1 RefSeq:NP_003409.1 UniGene:Hs.518249
ProteinModelPortal:P62633 SMR:P62633 IntAct:P62633 STRING:P62633
PhosphoSite:P62633 DMDM:50401852 PaxDb:P62633 PRIDE:P62633
DNASU:7555 Ensembl:ENST00000422453 Ensembl:ENST00000446936
Ensembl:ENST00000451728 Ensembl:ENST00000502976
Ensembl:ENST00000504813 GeneID:7555 KEGG:hsa:7555 UCSC:uc003elq.4
UCSC:uc003elr.4 GeneCards:GC03M128886 HGNC:HGNC:13164 MIM:116955
MIM:602668 neXtProt:NX_P62633 Orphanet:606 PharmGKB:PA37737
InParanoid:P62633 PhylomeDB:P62633 ChiTaRS:CNBP GenomeRNAi:7555
NextBio:29559 ArrayExpress:P62633 Bgee:P62633 CleanEx:HS_CNBP
Genevestigator:P62633 GermOnline:ENSG00000169714 Uniprot:P62633
Length = 177
Score = 209 (78.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/141 (34%), Positives = 64/141 (45%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 110
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH + +V CY CG++GH+ C+
Sbjct: 111 CD---HADEQK---CYSCGEFGH---IQKDCT---KVKCYRCGETGHVAINCS------- 151
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 152 -KTSEVNCYRCGESGHLAREC 171
Score = 175 (66.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 43/139 (30%), Positives = 63/139 (45%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC--P 480
+ C CG+ H A C +Q+ C+ CG H K+CK+ + + E +C P
Sbjct: 52 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPK-----REREQCCYNCGKP 104
Query: 481 G--TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
G ++ C CG+ GH C K++CY C GH+ +N S
Sbjct: 105 GHLARDCDHADEQKCYSCGEFGHIQKDCT---------KVKCYRCGETGHVA-INCS--K 152
Query: 539 LKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 153 TSEVNCYRCGESGHLAREC 171
Score = 162 (62.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 44/143 (30%), Positives = 63/143 (44%)
Query: 447 CFLCGSFKHRWKNCKQGQDC---FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
CF CG H + C G ++G SD G ++ + C RCG+SGH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSD-RGFQFVSSSLPDICYRCGESGHLA 64
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C DL++ CY C GH+ ++ CYNCG+ GHL +C ++ E
Sbjct: 65 KDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADE- 116
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
+K CY CG+ GH + C
Sbjct: 117 ---QK----CYSCGEFGHIQKDC 132
Score = 152 (58.6 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 41/124 (33%), Positives = 58/124 (46%)
Query: 465 DCFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSCEG-EYHADDLKKIQCYI 522
+CF S H A +CP G +G + S G G +S G ++ + L I CY
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSR-----GRGG--FTSDRGFQFVSSSLPDI-CYR 56
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
C GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH
Sbjct: 57 CGESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHL 107
Query: 583 ARRC 586
AR C
Sbjct: 108 ARDC 111
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 146
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
A +C T + N C RCG+SGH C
Sbjct: 147 AINCSKTSEVN------CYRCGESGHLAREC 171
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 34/107 (31%), Positives = 48/107 (44%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYN 546
+SSN C +CG SGH C G ++ S V+SS+ + CY
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI----CYR 56
Query: 547 CGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
CG+SGHL +C +A CY CG+ GH A+ C ++R
Sbjct: 57 CGESGHLAKDCDLQEDA---------CYNCGRGGHIAKDCKEPKRER 94
>UNIPROTKB|Q4R501 [details] [associations]
symbol:Q4R501 "Brain cDNA, clone: QnpA-14556, similar to
human zinc finger protein 9 (a cellular retroviral nucleicacid
binding protein) (ZNF9)," species:9541 "Macaca fascicularis"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0005783 GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOVERGEN:HBG000397 EMBL:AB169743
EMBL:AB174174 ProteinModelPortal:Q4R501 SMR:Q4R501 PRIDE:Q4R501
Uniprot:Q4R501
Length = 177
Score = 209 (78.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/141 (34%), Positives = 64/141 (45%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 110
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH + +V CY CG++GH+ C+
Sbjct: 111 CD---HADEQK---CYSCGEFGH---IQKDCT---KVKCYRCGETGHVAINCS------- 151
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 152 -KTSEVNCYRCGESGHLAREC 171
Score = 175 (66.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 43/139 (30%), Positives = 63/139 (45%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC--P 480
+ C CG+ H A C +Q+ C+ CG H K+CK+ + + E +C P
Sbjct: 52 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPK-----REREQCCYNCGKP 104
Query: 481 G--TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
G ++ C CG+ GH C K++CY C GH+ +N S
Sbjct: 105 GHLARDCDHADEQKCYSCGEFGHIQKDCT---------KVKCYRCGETGHVA-INCS--K 152
Query: 539 LKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 153 TSEVNCYRCGESGHLAREC 171
Score = 162 (62.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 44/143 (30%), Positives = 63/143 (44%)
Query: 447 CFLCGSFKHRWKNCKQGQDC---FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
CF CG H + C G ++G SD G ++ + C RCG+SGH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSD-RGFQFVSSSLPDICYRCGESGHLA 64
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C DL++ CY C GH+ ++ CYNCG+ GHL +C ++ E
Sbjct: 65 KDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADE- 116
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
+K CY CG+ GH + C
Sbjct: 117 ---QK----CYSCGEFGHIQKDC 132
Score = 152 (58.6 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 41/124 (33%), Positives = 58/124 (46%)
Query: 465 DCFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSCEG-EYHADDLKKIQCYI 522
+CF S H A +CP G +G + S G G +S G ++ + L I CY
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSR-----GRGG--FTSDRGFQFVSSSLPDI-CYR 56
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
C GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH
Sbjct: 57 CGESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHL 107
Query: 583 ARRC 586
AR C
Sbjct: 108 ARDC 111
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 146
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
A +C T + N C RCG+SGH C
Sbjct: 147 AINCSKTSEVN------CYRCGESGHLAREC 171
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 34/107 (31%), Positives = 48/107 (44%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYN 546
+SSN C +CG SGH C G ++ S V+SS+ + CY
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI----CYR 56
Query: 547 CGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
CG+SGHL +C +A CY CG+ GH A+ C ++R
Sbjct: 57 CGESGHLAKDCDLQEDA---------CYNCGRGGHIAKDCKEPKRER 94
>UNIPROTKB|Q5R5R5 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008284 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 Gene3D:4.10.60.10 SUPFAM:SSF57756
KO:K09250 CTD:7555 GeneTree:ENSGT00510000047065 HOVERGEN:HBG000397
OMA:CPNGQGG EMBL:CR860791 RefSeq:NP_001126703.1 UniGene:Pab.18652
ProteinModelPortal:Q5R5R5 SMR:Q5R5R5 PRIDE:Q5R5R5
Ensembl:ENSPPYT00000015613 GeneID:100173703 KEGG:pon:100173703
InParanoid:Q5R5R5 Uniprot:Q5R5R5
Length = 177
Score = 209 (78.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/141 (34%), Positives = 64/141 (45%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 110
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH + +V CY CG++GH+ C+
Sbjct: 111 CD---HADEQK---CYSCGEFGH---IQKDCT---KVKCYRCGETGHVAINCS------- 151
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 152 -KTSEVNCYRCGESGHLAREC 171
Score = 175 (66.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 43/139 (30%), Positives = 63/139 (45%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC--P 480
+ C CG+ H A C +Q+ C+ CG H K+CK+ + + E +C P
Sbjct: 52 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPK-----REREQCCYNCGKP 104
Query: 481 G--TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
G ++ C CG+ GH C K++CY C GH+ +N S
Sbjct: 105 GHLARDCDHADEQKCYSCGEFGHIQKDCT---------KVKCYRCGETGHVA-INCS--K 152
Query: 539 LKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 153 TSEVNCYRCGESGHLAREC 171
Score = 162 (62.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 44/143 (30%), Positives = 63/143 (44%)
Query: 447 CFLCGSFKHRWKNCKQGQDC---FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
CF CG H + C G ++G SD G ++ + C RCG+SGH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSD-RGFQFVSSSLPDICYRCGESGHLA 64
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C DL++ CY C GH+ ++ CYNCG+ GHL +C ++ E
Sbjct: 65 KDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADE- 116
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
+K CY CG+ GH + C
Sbjct: 117 ---QK----CYSCGEFGHIQKDC 132
Score = 152 (58.6 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 41/124 (33%), Positives = 58/124 (46%)
Query: 465 DCFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSCEG-EYHADDLKKIQCYI 522
+CF S H A +CP G +G + S G G +S G ++ + L I CY
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSR-----GRGG--FTSDRGFQFVSSSLPDI-CYR 56
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
C GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH
Sbjct: 57 CGESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHL 107
Query: 583 ARRC 586
AR C
Sbjct: 108 ARDC 111
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 146
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
A +C T + N C RCG+SGH C
Sbjct: 147 AINCSKTSEVN------CYRCGESGHLAREC 171
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 34/107 (31%), Positives = 48/107 (44%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYN 546
+SSN C +CG SGH C G ++ S V+SS+ + CY
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI----CYR 56
Query: 547 CGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
CG+SGHL +C +A CY CG+ GH A+ C ++R
Sbjct: 57 CGESGHLAKDCDLQEDA---------CYNCGRGGHIAKDCKEPKRER 94
>RGD|621807 [details] [associations]
symbol:Cnbp "CCHC-type zinc finger, nucleic acid binding protein"
species:10116 "Rattus norvegicus" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 RGD:621807 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0003727 GO:GO:0045944 GO:GO:0006351
GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
OrthoDB:EOG45HRZN EMBL:D45254 EMBL:AF242550 EMBL:AY329624
EMBL:AB158421 EMBL:AB158422 EMBL:BC062225 IPI:IPI00201505
PIR:JC2512 RefSeq:NP_072120.1 UniGene:Rn.6187
ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
Length = 177
Score = 209 (78.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/141 (34%), Positives = 64/141 (45%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 110
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH + +V CY CG++GH+ C+
Sbjct: 111 CD---HADEQK---CYSCGEFGH---IQKDCT---KVKCYRCGETGHVAINCS------- 151
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 152 -KTSEVNCYRCGESGHLAREC 171
Score = 175 (66.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 43/139 (30%), Positives = 63/139 (45%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC--P 480
+ C CG+ H A C +Q+ C+ CG H K+CK+ + + E +C P
Sbjct: 52 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPK-----REREQCCYNCGKP 104
Query: 481 G--TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
G ++ C CG+ GH C K++CY C GH+ +N S
Sbjct: 105 GHLARDCDHADEQKCYSCGEFGHIQKDCT---------KVKCYRCGETGHVA-INCS--K 152
Query: 539 LKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 153 TSEVNCYRCGESGHLAREC 171
Score = 162 (62.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 44/143 (30%), Positives = 63/143 (44%)
Query: 447 CFLCGSFKHRWKNCKQGQDC---FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
CF CG H + C G ++G SD G ++ + C RCG+SGH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSD-RGFQFVSSSLPDICYRCGESGHLA 64
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C DL++ CY C GH+ ++ CYNCG+ GHL +C ++ E
Sbjct: 65 KDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADE- 116
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
+K CY CG+ GH + C
Sbjct: 117 ---QK----CYSCGEFGHIQKDC 132
Score = 152 (58.6 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 41/124 (33%), Positives = 58/124 (46%)
Query: 465 DCFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSCEG-EYHADDLKKIQCYI 522
+CF S H A +CP G +G + S G G +S G ++ + L I CY
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSR-----GRGG--FTSDRGFQFVSSSLPDI-CYR 56
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
C GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH
Sbjct: 57 CGESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHL 107
Query: 583 ARRC 586
AR C
Sbjct: 108 ARDC 111
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 146
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
A +C T + N C RCG+SGH C
Sbjct: 147 AINCSKTSEVN------CYRCGESGHLAREC 171
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 34/107 (31%), Positives = 48/107 (44%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYN 546
+SSN C +CG SGH C G ++ S V+SS+ + CY
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI----CYR 56
Query: 547 CGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
CG+SGHL +C +A CY CG+ GH A+ C ++R
Sbjct: 57 CGESGHLAKDCDLQEDA---------CYNCGRGGHIAKDCKEPKRER 94
>UNIPROTKB|P62634 [details] [associations]
symbol:Cnbp "Cellular nucleic acid-binding protein"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 RGD:621807 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
CTD:7555 HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:D45254
EMBL:AF242550 EMBL:AY329624 EMBL:AB158421 EMBL:AB158422
EMBL:BC062225 IPI:IPI00201505 PIR:JC2512 RefSeq:NP_072120.1
UniGene:Rn.6187 ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
Length = 177
Score = 209 (78.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/141 (34%), Positives = 64/141 (45%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 110
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH + +V CY CG++GH+ C+
Sbjct: 111 CD---HADEQK---CYSCGEFGH---IQKDCT---KVKCYRCGETGHVAINCS------- 151
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 152 -KTSEVNCYRCGESGHLAREC 171
Score = 175 (66.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 43/139 (30%), Positives = 63/139 (45%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC--P 480
+ C CG+ H A C +Q+ C+ CG H K+CK+ + + E +C P
Sbjct: 52 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPK-----REREQCCYNCGKP 104
Query: 481 G--TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
G ++ C CG+ GH C K++CY C GH+ +N S
Sbjct: 105 GHLARDCDHADEQKCYSCGEFGHIQKDCT---------KVKCYRCGETGHVA-INCS--K 152
Query: 539 LKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 153 TSEVNCYRCGESGHLAREC 171
Score = 162 (62.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 44/143 (30%), Positives = 63/143 (44%)
Query: 447 CFLCGSFKHRWKNCKQGQDC---FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
CF CG H + C G ++G SD G ++ + C RCG+SGH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSD-RGFQFVSSSLPDICYRCGESGHLA 64
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C DL++ CY C GH+ ++ CYNCG+ GHL +C ++ E
Sbjct: 65 KDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADE- 116
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
+K CY CG+ GH + C
Sbjct: 117 ---QK----CYSCGEFGHIQKDC 132
Score = 152 (58.6 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 41/124 (33%), Positives = 58/124 (46%)
Query: 465 DCFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSCEG-EYHADDLKKIQCYI 522
+CF S H A +CP G +G + S G G +S G ++ + L I CY
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSR-----GRGG--FTSDRGFQFVSSSLPDI-CYR 56
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
C GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH
Sbjct: 57 CGESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHL 107
Query: 583 ARRC 586
AR C
Sbjct: 108 ARDC 111
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 146
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
A +C T + N C RCG+SGH C
Sbjct: 147 AINCSKTSEVN------CYRCGESGHLAREC 171
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 34/107 (31%), Positives = 48/107 (44%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYN 546
+SSN C +CG SGH C G ++ S V+SS+ + CY
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI----CYR 56
Query: 547 CGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
CG+SGHL +C +A CY CG+ GH A+ C ++R
Sbjct: 57 CGESGHLAKDCDLQEDA---------CYNCGRGGHIAKDCKEPKRER 94
>UNIPROTKB|F1N8C2 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 OMA:FQFMSSS GeneTree:ENSGT00510000047065
IPI:IPI00582111 EMBL:AADN02013931 Ensembl:ENSGALT00000036274
ArrayExpress:F1N8C2 Uniprot:F1N8C2
Length = 171
Score = 209 (78.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 48/141 (34%), Positives = 64/141 (45%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 48 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 104
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH + +V CY CG++GH+ C+
Sbjct: 105 CD---HADEQK---CYSCGEFGH---IQKDCT---KVKCYRCGETGHVAINCS------- 145
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 146 -KTSEVNCYRCGESGHLAREC 165
Score = 175 (66.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 43/139 (30%), Positives = 63/139 (45%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC--P 480
+ C CG+ H A C +Q+ C+ CG H K+CK+ + + E +C P
Sbjct: 46 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPK-----REREQCCYNCGKP 98
Query: 481 G--TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
G ++ C CG+ GH C K++CY C GH+ +N S
Sbjct: 99 GHLARDCDHADEQKCYSCGEFGHIQKDCT---------KVKCYRCGETGHVA-INCS--K 146
Query: 539 LKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 147 TSEVNCYRCGESGHLAREC 165
Score = 166 (63.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 43/140 (30%), Positives = 62/140 (44%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF CG H + C G I +G + G ++ + C RCG+SGH C
Sbjct: 6 CFKCGRTGHWARECPTG----IGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDC 61
Query: 507 EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNG 566
DL++ CY C GH+ ++ CYNCG+ GHL +C ++ E
Sbjct: 62 -------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADE---- 110
Query: 567 KKSNLICYKCGKEGHFARRC 586
+K CY CG+ GH + C
Sbjct: 111 QK----CYSCGEFGHIQKDC 126
Score = 145 (56.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 37/115 (32%), Positives = 52/115 (45%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----EG-----------EYHADDLKKIQCYICKSFGHLCC 531
+SSN C +CG +GH C G ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDI-CYRCGESGHL-- 57
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 58 --AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 105
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 83 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 140
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
A +C T + N C RCG+SGH C
Sbjct: 141 AINCSKTSEVN------CYRCGESGHLAREC 165
>MGI|MGI:88431 [details] [associations]
symbol:Cnbp "cellular nucleic acid binding protein"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
MGI:MGI:88431 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
CTD:7555 HOVERGEN:HBG000397 ChiTaRS:CNBP EMBL:L12693 EMBL:Z11870
EMBL:X63866 EMBL:Z11871 EMBL:U20326 EMBL:AY176064 EMBL:AK075760
EMBL:AK078427 EMBL:BC058723 IPI:IPI00137229 IPI:IPI00330767
IPI:IPI00454151 PIR:I48297 PIR:I48298 PIR:I49259
RefSeq:NP_001103215.1 RefSeq:NP_038521.1 UniGene:Mm.290251
ProteinModelPortal:P53996 SMR:P53996 IntAct:P53996 STRING:P53996
PhosphoSite:P53996 PaxDb:P53996 PRIDE:P53996
Ensembl:ENSMUST00000032138 Ensembl:ENSMUST00000113619 GeneID:12785
KEGG:mmu:12785 InParanoid:P53996 OMA:CPNGQGG NextBio:282182
Bgee:P53996 CleanEx:MM_CNBP Genevestigator:P53996
GermOnline:ENSMUSG00000030057 Uniprot:P53996
Length = 178
Score = 204 (76.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 49/143 (34%), Positives = 66/143 (46%)
Query: 447 CFLCGSFKHRWKNCKQGQD--CFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H K+C +D C+ N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDEACY-NCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLA 109
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C+ HAD+ K CY C FGH + +V CY CG++GH+ C+
Sbjct: 110 RDCD---HADEQK---CYSCGEFGH---IQKDCT---KVKCYRCGETGHVAINCS----- 152
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 153 ---KTSEVNCYRCGESGHLAREC 172
Score = 180 (68.4 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC--P 480
+ C CG+ H A C +Q +++ C+ CG H K+CK+ + + E +C P
Sbjct: 52 DICYRCGESGHLAKDCDLQ-EDEACYNCGRGGHIAKDCKEPK-----REREQCCYNCGKP 105
Query: 481 G--TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
G ++ C CG+ GH C K++CY C GH+ +N S
Sbjct: 106 GHLARDCDHADEQKCYSCGEFGHIQKDCT---------KVKCYRCGETGHVA-INCS--K 153
Query: 539 LKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 154 TSEVNCYRCGESGHLAREC 172
Score = 156 (60.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 43/143 (30%), Positives = 62/143 (43%)
Query: 447 CFLCGSFKHRWKNCKQGQDC---FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
CF CG H + C G ++G SD G ++ + C RCG+SGH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSD-RGFQFVSSSLPDICYRCGESGHLA 64
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C+ D+ CY C GH+ ++ CYNCG+ GHL +C ++ E
Sbjct: 65 KDCD--LQEDEA----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADE- 117
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
+K CY CG+ GH + C
Sbjct: 118 ---QK----CYSCGEFGHIQKDC 133
Score = 147 (56.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK H A C + K C+ CG F
Sbjct: 70 QEDEACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 127
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
H K+C + + C+ + H+A +C T + N C RCG+SGH C
Sbjct: 128 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGHLAREC 172
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 40/124 (32%), Positives = 57/124 (45%)
Query: 465 DCFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSCEG-EYHADDLKKIQCYI 522
+CF S H A +CP G +G + S G G +S G ++ + L I CY
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSR-----GRGG--FTSDRGFQFVSSSLPDI-CYR 56
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
C GHL + + + +CYNCG+ GH+ +C ++ CY CGK GH
Sbjct: 57 CGESGHLA-KDCDL--QEDEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHL 108
Query: 583 ARRC 586
AR C
Sbjct: 109 ARDC 112
Score = 119 (46.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 33/107 (30%), Positives = 48/107 (44%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYN 546
+SSN C +CG SGH C G ++ S V+SS+ + CY
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI----CYR 56
Query: 547 CGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
CG+SGHL +C + + CY CG+ GH A+ C ++R
Sbjct: 57 CGESGHLAKDC--------DLQEDEACYNCGRGGHIAKDCKEPKRER 95
>UNIPROTKB|O42395 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0006351
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
OrthoDB:EOG45HRZN EMBL:AF004942 IPI:IPI00582111 RefSeq:NP_990238.1
UniGene:Gga.3333 ProteinModelPortal:O42395 STRING:O42395
GeneID:395731 KEGG:gga:395731 InParanoid:O42395 NextBio:20815799
ArrayExpress:O42395 Uniprot:O42395
Length = 172
Score = 204 (76.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 49/143 (34%), Positives = 66/143 (46%)
Query: 447 CFLCGSFKHRWKNCKQGQD--CFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H K+C +D C+ N G H+A DC + C CG GH
Sbjct: 48 CYRCGESGHLAKDCDLQEDKACY-NCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLA 103
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C+ HAD+ K CY C FGH + +V CY CG++GH+ C+
Sbjct: 104 RDCD---HADEQK---CYSCGEFGH---IQKDCT---KVKCYRCGETGHVAINCS----- 146
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 147 ---KTSEVNCYRCGESGHLAREC 166
Score = 184 (69.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 44/139 (31%), Positives = 65/139 (46%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC--P 480
+ C CG+ H A C +Q ++K C+ CG H K+CK+ + + E +C P
Sbjct: 46 DICYRCGESGHLAKDCDLQ-EDKACYNCGRGGHIAKDCKEPK-----REREQCCYNCGKP 99
Query: 481 G--TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
G ++ C CG+ GH C K++CY C GH+ +N S
Sbjct: 100 GHLARDCDHADEQKCYSCGEFGHIQKDCT---------KVKCYRCGETGHVA-INCS--K 147
Query: 539 LKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 148 TSEVNCYRCGESGHLAREC 166
Score = 159 (61.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 43/141 (30%), Positives = 63/141 (44%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF CG H + C G I +G + G ++ + C RCG+SGH C
Sbjct: 6 CFKCGRTGHWARECPTG----IGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDC 61
Query: 507 EGEYHADDLKKIQ-CYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
DL++ + CY C GH+ ++ CYNCG+ GHL +C ++ E
Sbjct: 62 -------DLQEDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADE--- 111
Query: 566 GKKSNLICYKCGKEGHFARRC 586
+K CY CG+ GH + C
Sbjct: 112 -QK----CYSCGEFGHIQKDC 127
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 84 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 141
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
A +C T + N C RCG+SGH C
Sbjct: 142 AINCSKTSEVN------CYRCGESGHLAREC 166
Score = 137 (53.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 36/115 (31%), Positives = 51/115 (44%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----EG-----------EYHADDLKKIQCYICKSFGHLCC 531
+SSN C +CG +GH C G ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDI-CYRCGESGHLA- 58
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ + + +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 59 KDCDL--QEDKACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 106
>TAIR|locus:2135139 [details] [associations]
symbol:CSDP1 "cold shock domain protein 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009409 "response
to cold" evidence=IGI;IEP] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0009414
"response to water deprivation" evidence=IEP] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] [GO:0009631 "cold acclimation" evidence=IGI]
[GO:0009165 "nucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001878 InterPro:IPR002059 InterPro:IPR011129
Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050 PROSITE:PS50158
SMART:SM00343 SMART:SM00357 Prosite:PS00352 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0009651 GO:GO:0009414 GO:GO:0008270
GO:GO:0009631 GO:GO:0003723 EMBL:AL161588 GO:GO:0003690
GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AL022373
HOGENOM:HOG000186262 KO:K09250 InterPro:IPR019844 GO:GO:0010501
EMBL:AK226815 IPI:IPI00525206 PIR:T05494 RefSeq:NP_195326.1
UniGene:At.23073 HSSP:P15277 ProteinModelPortal:O65639 SMR:O65639
STRING:O65639 PaxDb:O65639 PRIDE:O65639 EnsemblPlants:AT4G36020.1
GeneID:829758 KEGG:ath:AT4G36020 TAIR:At4g36020 eggNOG:COG1278
InParanoid:O65639 OMA:GRACYNC PhylomeDB:O65639
ProtClustDB:CLSN2685328 Genevestigator:O65639 GO:GO:0032508
Uniprot:O65639
Length = 299
Score = 209 (78.6 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 61/185 (32%), Positives = 76/185 (41%)
Query: 423 ETCSNCGKENHTAATCKM-----QKQ-----NKPCFLCGSFKHRWKNCKQGQDCFINKGS 472
E C NCG H A C Q+ N C+ CG H ++C Q + G
Sbjct: 132 EGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKS---VGNGD 188
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI-----QCYICKSFG 527
+ G +G N + C CGD GH C + A +++ CY C G
Sbjct: 189 QR------GAVKGGN---DGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVG 239
Query: 528 HLC--CVNSSIIGLKQVS--CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
H+ C +Q S CY CG SGHL +C G N CYKCGKEGHFA
Sbjct: 240 HIARDCATK-----RQPSRGCYQCGGSGHLARDCDQRGSG-GGGNDNA-CYKCGKEGHFA 292
Query: 584 RRCGS 588
R C S
Sbjct: 293 RECSS 297
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 48/178 (26%), Positives = 63/178 (35%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASD 478
G C NCG+ H + K C + G + + G+ C+ + H A D
Sbjct: 96 GGGGSGCYNCGELGHIS---------KDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARD 146
Query: 479 CP----GTDQGNNLSSNF-CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
C G +G N C CGD GH C KS G+
Sbjct: 147 CTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQ---------------KSVGN-GDQR 190
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALN---GKKSNLICYKCGKEGHFARRCGS 588
++ G CY CG GH +C A N G + CY CG GH AR C +
Sbjct: 191 GAVKGGND-GCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCAT 247
>CGD|CAL0002417 [details] [associations]
symbol:GIS2 species:5476 "Candida albicans" [GO:0070417
"cellular response to cold" evidence=IMP] [GO:0003676 "nucleic acid
binding" evidence=NAS] [GO:0071470 "cellular response to osmotic
stress" evidence=IMP] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0042788 "polysomal ribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000747 "conjugation with cellular fusion"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0045182
"translation regulator activity" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 CGD:CAL0002417
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0035690
EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470 GO:GO:0070417
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
Length = 175
Score = 194 (73.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 52/182 (28%), Positives = 74/182 (40%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQG--QDCFINKGSEHLASD 478
TC CG+ H A C Q++ + C+ C H +C KQ + C+ H+ ++
Sbjct: 8 TCYKCGEVGHVADDC--QQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTE 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE----YHADDLKK-------IQCYICKSFG 527
CP QG C CG GH +C+ +A K+ CY C
Sbjct: 66 CPNQAQGAK-----CYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPN 120
Query: 528 HL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
H C N+ V CY CG+ GH+ +C +S N CY CGK GH ++
Sbjct: 121 HFARDCQANT-------VKCYACGKVGHISKDCHSSAGGSNFSAKT--CYNCGKSGHISK 171
Query: 585 RC 586
C
Sbjct: 172 EC 173
Score = 182 (69.1 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 46/146 (31%), Positives = 59/146 (40%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
DP ++ C +CG H C Q Q C+ CG F H KNC N S
Sbjct: 44 DPKQNTAKQCYSCGDVGHIQTECPNQAQGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKR 103
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVN 533
S G G C +CG H C+ ++CY C GH+ C +
Sbjct: 104 PS---GRASGTT-----CYKCGGPNHFARDCQAN-------TVKCYACGKVGHISKDC-H 147
Query: 534 SSIIG--LKQVSCYNCGQSGHLGPEC 557
SS G +CYNCG+SGH+ EC
Sbjct: 148 SSAGGSNFSAKTCYNCGKSGHISKEC 173
Score = 169 (64.5 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 45/127 (35%), Positives = 57/127 (44%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H+A DC Q L C C GH+ + C + K QCY C GH+ C
Sbjct: 17 HVADDC---QQEERL----CYNCHKPGHESNDCPDP--KQNTAK-QCYSCGDVGHIQTEC 66
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN---------GKKSNLICYKCGKEGHF 582
N + G K CYNCGQ GH+ C ++ + N G+ S CYKCG HF
Sbjct: 67 PNQAQ-GAK---CYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHF 122
Query: 583 ARRCGSN 589
AR C +N
Sbjct: 123 ARDCQAN 129
>UNIPROTKB|Q59YJ9 [details] [associations]
symbol:GIS2 "Putative uncharacterized protein GIS2"
species:237561 "Candida albicans SC5314" [GO:0003676 "nucleic acid
binding" evidence=NAS] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0070417 "cellular response to cold" evidence=IMP]
[GO:0071470 "cellular response to osmotic stress" evidence=IMP]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
CGD:CAL0002417 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0035690 EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470
GO:GO:0070417 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
Length = 175
Score = 194 (73.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 52/182 (28%), Positives = 74/182 (40%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQG--QDCFINKGSEHLASD 478
TC CG+ H A C Q++ + C+ C H +C KQ + C+ H+ ++
Sbjct: 8 TCYKCGEVGHVADDC--QQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTE 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE----YHADDLKK-------IQCYICKSFG 527
CP QG C CG GH +C+ +A K+ CY C
Sbjct: 66 CPNQAQGAK-----CYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPN 120
Query: 528 HL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
H C N+ V CY CG+ GH+ +C +S N CY CGK GH ++
Sbjct: 121 HFARDCQANT-------VKCYACGKVGHISKDCHSSAGGSNFSAKT--CYNCGKSGHISK 171
Query: 585 RC 586
C
Sbjct: 172 EC 173
Score = 182 (69.1 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 46/146 (31%), Positives = 59/146 (40%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
DP ++ C +CG H C Q Q C+ CG F H KNC N S
Sbjct: 44 DPKQNTAKQCYSCGDVGHIQTECPNQAQGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKR 103
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVN 533
S G G C +CG H C+ ++CY C GH+ C +
Sbjct: 104 PS---GRASGTT-----CYKCGGPNHFARDCQAN-------TVKCYACGKVGHISKDC-H 147
Query: 534 SSIIG--LKQVSCYNCGQSGHLGPEC 557
SS G +CYNCG+SGH+ EC
Sbjct: 148 SSAGGSNFSAKTCYNCGKSGHISKEC 173
Score = 169 (64.5 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 45/127 (35%), Positives = 57/127 (44%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H+A DC Q L C C GH+ + C + K QCY C GH+ C
Sbjct: 17 HVADDC---QQEERL----CYNCHKPGHESNDCPDP--KQNTAK-QCYSCGDVGHIQTEC 66
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN---------GKKSNLICYKCGKEGHF 582
N + G K CYNCGQ GH+ C ++ + N G+ S CYKCG HF
Sbjct: 67 PNQAQ-GAK---CYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHF 122
Query: 583 ARRCGSN 589
AR C +N
Sbjct: 123 ARDCQAN 129
>UNIPROTKB|G4N4A8 [details] [associations]
symbol:MGG_05948 "Zinc knuckle domain-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CM001233 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K09250
RefSeq:XP_003711783.1 ProteinModelPortal:G4N4A8
EnsemblFungi:MGG_05948T0 GeneID:2684027 KEGG:mgr:MGG_05948
Uniprot:G4N4A8
Length = 199
Score = 185 (70.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 52/185 (28%), Positives = 77/185 (41%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQ-KQNKPCFLCGSFKHRWKNCKQGQ--DCFINKGS 472
D P + C NCG E H + C + K K C+ C H ++C G G
Sbjct: 28 DCPNRGAAKCYNCGGEGHISRACPEEPKDQKICYRCSQPGHISRDCPSGGAGGGGGGGGG 87
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCG---DSGHDLSSCEGEY---HADDLKKIQCYICKSF 526
+ ++C + +++ N C + G G S G Y + CY C
Sbjct: 88 QSSGAECYKCGEVGHIARN-CSKGGYGGGGGGGYSGGGGGYGGGYGGGAGGKTCYSCGGV 146
Query: 527 GHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GH+ CVN S CYNCG++GH +C+ + G+K +CYKC + GH
Sbjct: 147 GHMSRDCVNGS-------KCYNCGETGHFSRDCSK--RSTTGEK---MCYKCQQPGHVQA 194
Query: 585 RCGSN 589
C +N
Sbjct: 195 ECPNN 199
Score = 136 (52.9 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 34/113 (30%), Positives = 41/113 (36%)
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL--CCVNSSIIG 538
G Q C CG H C A +CY C GH+ C
Sbjct: 4 GGAQSGGAGGRTCYTCGQPNHQARDCPNRGAA------KCYNCGGEGHISRACPEEP--- 54
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNG-----KKSNLICYKCGKEGHFARRC 586
Q CY C Q GH+ +C + G + S CYKCG+ GH AR C
Sbjct: 55 KDQKICYRCSQPGHISRDCPSGGAGGGGGGGGGQSSGAECYKCGEVGHIARNC 107
Score = 122 (48.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 33/104 (31%), Positives = 45/104 (43%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSEH 474
G TC CG+ NH A C + K C+ CG H + C K + C+ H
Sbjct: 10 GAGGRTCYTCGQPNHQARDCPNRGAAK-CYNCGGEGHISRACPEEPKDQKICYRCSQPGH 68
Query: 475 LASDCP------GTDQGNNLSSNF-CLRCGDSGHDLSSC-EGEY 510
++ DCP G G SS C +CG+ GH +C +G Y
Sbjct: 69 ISRDCPSGGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSKGGY 112
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/156 (25%), Positives = 54/156 (34%)
Query: 445 KPCFLCGSFKHRWKNC-KQGQ-DCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHD 502
+ C+ CG H+ ++C +G C+ G H++ CP + + C RC GH
Sbjct: 14 RTCYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRACPEEPKDQKI----CYRCSQPGHI 69
Query: 503 LSSCE-------GEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGP 555
C G +CY C GH+ N S G Y G G
Sbjct: 70 SRDCPSGGAGGGGGGGGGQSSGAECYKCGEVGHIAR-NCSKGG------YGGGGGGGYSG 122
Query: 556 ECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK 591
G CY CG GH +R C + K
Sbjct: 123 GGGGYGGGYGGGAGGKTCYSCGGVGHMSRDCVNGSK 158
>SGD|S000005199 [details] [associations]
symbol:GIS2 "Translational activator for mRNAs with internal
ribosome entry sites" species:4932 "Saccharomyces cerevisiae"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042788 "polysomal ribosome" evidence=IPI] [GO:0045182
"translation regulator activity" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 SGD:S000005199 GO:GO:0046872
GO:GO:0008270 GO:GO:0003729 EMBL:BK006947 GO:GO:0045182
GO:GO:0042788 GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0045727 EMBL:X96722 HOGENOM:HOG000186262
KO:K09250 GeneTree:ENSGT00510000047065 EMBL:Z71531 EMBL:AY558002
PIR:S63228 RefSeq:NP_014144.1 ProteinModelPortal:P53849 SMR:P53849
DIP:DIP-2669N IntAct:P53849 MINT:MINT-2732013 STRING:P53849
PaxDb:P53849 PeptideAtlas:P53849 EnsemblFungi:YNL255C GeneID:855466
KEGG:sce:YNL255C CYGD:YNL255c OMA:QCYNCGE OrthoDB:EOG4SJ8Q6
NextBio:979403 Genevestigator:P53849 GermOnline:YNL255C
Uniprot:P53849
Length = 153
Score = 180 (68.4 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 49/175 (28%), Positives = 71/175 (40%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSE-H 474
+ + C CGK H A C ++ C+ C H +C + + C+ N G H
Sbjct: 2 SQKACYVCGKIGHLAEDCDSERL---CYNCNKPGHVQTDCTMPRTVEFKQCY-NCGETGH 57
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CC 531
+ S+C T Q C C +GH C K+ CY C H+ C
Sbjct: 58 VRSEC--TVQR-------CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCM 108
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
I GLK CY CGQ+GH+ +C N + +CY C + GH ++ C
Sbjct: 109 KEDGISGLK---CYTCGQAGHMSRDCQN----------DRLCYNCNETGHISKDC 150
Score = 131 (51.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 38/117 (32%), Positives = 49/117 (41%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCY 545
+S C CG GH C+ E ++ CY C GH+ C + KQ CY
Sbjct: 1 MSQKACYVCGKIGHLAEDCDSE-------RL-CYNCNKPGHVQTDCTMPRTVEFKQ--CY 50
Query: 546 NCGQSGHLGPECA-NSC-----------EALNGKK----SNLICYKCGKEGHFARRC 586
NCG++GH+ EC C E KK S + CYKCG H A+ C
Sbjct: 51 NCGETGHVRSECTVQRCFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDC 107
>UNIPROTKB|G3MZ41 [details] [associations]
symbol:ZCCHC13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000047065 OMA:SSKECFK EMBL:DAAA02072583
Ensembl:ENSBTAT00000001124 Uniprot:G3MZ41
Length = 175
Score = 179 (68.1 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 45/138 (32%), Positives = 63/138 (45%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSE-HLASDC 479
C CGK H A C + + C+ CG H K+C ++G+ C G HLA DC
Sbjct: 52 CYRCGKFGHYAKDCDLL--DDICYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDC 109
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
++ C CG SGH C +++CY C GH+ +N +
Sbjct: 110 DRQEERK------CYSCGKSGHIQKYCT---------QVKCYRCGEIGHVA-INCR--KM 151
Query: 540 KQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 152 NEVNCYRCGESGHLTREC 169
Score = 149 (57.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 49/160 (30%), Positives = 62/160 (38%)
Query: 444 NKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSN----FCLRCGDS 499
+K CF CG H W C +KG G G SS C RCG
Sbjct: 7 SKECFKCGRVGH-WAPA-----C--SKGGGARGRGARGRGHGAQCSSTTLPVICYRCGKF 58
Query: 500 GHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPEC 557
GH C+ DD+ CY C GH+ C G + CY CG+ GHL +C
Sbjct: 59 GHYAKDCD---LLDDI----CYNCGKSGHIAKDCAEPKREGER--CCYTCGRPGHLARDC 109
Query: 558 ----ANSCEALNGKKSNLI-------CYKCGKEGHFARRC 586
C + GK ++ CY+CG+ GH A C
Sbjct: 110 DRQEERKCYSC-GKSGHIQKYCTQVKCYRCGEIGHVAINC 148
Score = 141 (54.7 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 37/114 (32%), Positives = 48/114 (42%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-----------GEYHADDLKK----IQCYICKSFGHLCCV 532
+SS C +CG GH +C G H + CY C FGH
Sbjct: 5 MSSKECFKCGRVGHWAPACSKGGGARGRGARGRGHGAQCSSTTLPVICYRCGKFGHY--- 61
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L CYNCG+SGH+ +CA G++ CY CG+ GH AR C
Sbjct: 62 -AKDCDLLDDICYNCGKSGHIAKDCAEPKR--EGERC---CYTCGRPGHLARDC 109
Score = 126 (49.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 29/91 (31%), Positives = 41/91 (45%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P C CG+ H A C Q++ K C+ CG H K C Q + C+ H+
Sbjct: 87 EPKREGERCCYTCGRPGHLARDCDRQEERK-CYSCGKSGHIQKYCTQVK-CYRCGEIGHV 144
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
A +C ++ N C RCG+SGH C
Sbjct: 145 AINCRKMNEVN------CYRCGESGHLTREC 169
Score = 126 (49.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/111 (27%), Positives = 47/111 (42%)
Query: 423 ETCSNCGKENHTAATCKMQKQN--KPCFLCGSFKHRWKNCKQGQD--CFINKGSEHLASD 478
+ C NCGK H A C K+ + C+ CG H ++C + ++ C+ S H+
Sbjct: 70 DICYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDCDRQEERKCYSCGKSGHIQKY 129
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
C C RCG+ GH +C + ++ CY C GHL
Sbjct: 130 CTQVK---------CYRCGEIGHVAINCR------KMNEVNCYRCGESGHL 165
>POMBASE|SPAC13D6.02c [details] [associations]
symbol:byr3 "zinc finger protein Byr3" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IGI] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 PomBase:SPAC13D6.02c GO:GO:0005829 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0000747 EMBL:S45038 PIR:T37622 RefSeq:NP_593680.1
ProteinModelPortal:P36627 STRING:P36627 PRIDE:P36627
EnsemblFungi:SPAC13D6.02c.1 GeneID:2542829 KEGG:spo:SPAC13D6.02c
HOGENOM:HOG000186262 KO:K09250 OMA:FQFMSSS OrthoDB:EOG4K0TXR
NextBio:20803871 GO:GO:0031137 Uniprot:P36627
Length = 179
Score = 177 (67.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 44/149 (29%), Positives = 62/149 (41%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC------KQGQDCFINKGSEHLASD 478
C NC + H A+ C +Q K C+ CG+ H ++C +QG +C+ H+A D
Sbjct: 38 CYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARD 97
Query: 479 CPGTDQ------GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC-- 530
C Q G + S+ C CG GH C ++CY C GH
Sbjct: 98 CRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCT--------MGVKCYSCGKIGHRSFE 149
Query: 531 CVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
C +S L CY C Q GH+ C +
Sbjct: 150 CQQASDGQL----CYKCNQPGHIAVNCTS 174
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/180 (26%), Positives = 71/180 (39%)
Query: 431 ENHTAATCKMQKQNKP-CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLS 489
E+ + T + P C+ CG H+ + C +G C+ + H AS+C Q
Sbjct: 2 ESESVPTVPQTTRPGPRCYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKT-- 59
Query: 490 SNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLK------ 540
C CG +GH + C + + +CY C GH+ C N G +
Sbjct: 60 ---CYACGTAGHLVRDCPSS--PNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRS 114
Query: 541 QVSCYNCGQSGHLGPECAN-----SCEALNGKK-------SNLICYKCGKEGHFARRCGS 588
++CY CG GH +C SC + + +CYKC + GH A C S
Sbjct: 115 NMNCYACGSYGHQARDCTMGVKCYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNCTS 174
Score = 160 (61.4 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 41/137 (29%), Positives = 59/137 (43%)
Query: 461 KQGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ 519
+ G C+ N G H A +C + C C +GH S C + ++
Sbjct: 14 RPGPRCY-NCGENGHQARECT--------KGSICYNCNQTGHKASEC-----TEPQQEKT 59
Query: 520 CYICKSFGHLCCVNSSIIGLKQ-VSCYNCGQSGHLGPECANSCEALNGK----KSNLICY 574
CY C + GHL S +Q CY CG+ GH+ +C + + G+ +SN+ CY
Sbjct: 60 CYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCY 119
Query: 575 KCGKEGHFARRCGSNFK 591
CG GH AR C K
Sbjct: 120 ACGSYGHQARDCTMGVK 136
>TAIR|locus:2827810 [details] [associations]
symbol:CSP3 "cold shock domain protein 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009409 "response to cold"
evidence=IEP;IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009631
"cold acclimation" evidence=IMP] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002059
InterPro:IPR011129 Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050
PROSITE:PS50158 SMART:SM00343 SMART:SM00357 Prosite:PS00352
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0009631 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 InterPro:IPR019844 eggNOG:COG1278
ProtClustDB:CLSN2685328 GO:GO:0032508 HSSP:O54310 EMBL:AB308041
EMBL:AY035133 EMBL:AY062985 IPI:IPI00519047 PIR:T00837
RefSeq:NP_565427.1 UniGene:At.19464 ProteinModelPortal:Q94C69
SMR:Q94C69 PaxDb:Q94C69 PRIDE:Q94C69 EnsemblPlants:AT2G17870.1
GeneID:816297 KEGG:ath:AT2G17870 TAIR:At2g17870 InParanoid:Q94C69
OMA:MEDQSAA PhylomeDB:Q94C69 Genevestigator:Q94C69 Uniprot:Q94C69
Length = 301
Score = 187 (70.9 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 56/180 (31%), Positives = 72/180 (40%)
Query: 425 CSNCGKENHTAATCKMQKQN---------KPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
C CG H A C+ +PC+ CG H K+C+ G G+ +
Sbjct: 132 CYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSG-----GNRY- 185
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD-DLKKIQCYICKSFGHLCCVNS 534
G G + C CG GH C + CY C GH+ V +
Sbjct: 186 -----GGGGGRGSGGDGCYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCT 240
Query: 535 SII----GLKQVSCYNCGQSGHLGPEC--ANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
S I G +CY CG +GHL +C S + G SN C+ CGKEGHFAR C S
Sbjct: 241 SKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNK-CFICGKEGHFARECTS 299
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 51/178 (28%), Positives = 70/178 (39%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C NCG+ H A C K F G + ++ +G+ C++ H A DC +
Sbjct: 96 CFNCGEVGHMAKDCDGGSGGKS-FGGGGGR---RSGGEGE-CYMCGDVGHFARDCRQSGG 150
Query: 485 GNNLSSNF----CLRCGDSGHDLSSCEG-----EYHADDLKKIQ---CYICKSFGHL--- 529
GN+ C CG+ GH C G Y + CY+C GH
Sbjct: 151 GNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGHFARD 210
Query: 530 CCVNSS-IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C N +G +CY CG GH+ C + + G CY+CG GH AR C
Sbjct: 211 CRQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKIPS-GGGGGGRACYECGGTGHLARDC 267
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/154 (32%), Positives = 61/154 (39%)
Query: 451 GSFKHRWKNCK-QGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG 508
GS + + + G +CF N G H+A DC G G + G G S EG
Sbjct: 80 GSLNKKENSSRGSGGNCF-NCGEVGHMAKDCDGGSGGKSF--------GGGGGRRSGGEG 130
Query: 509 EYHADDLKKIQCYICKSFGHLC--CV-----NSSIIGLKQVSCYNCGQSGHLGPEC---- 557
E CY+C GH C NS G CY+CG+ GHL +C
Sbjct: 131 E----------CYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGS 180
Query: 558 -ANSCEALNGKKSNLI-CYKCGKEGHFARRCGSN 589
N G+ S CY CG GHFAR C N
Sbjct: 181 GGNRYGGGGGRGSGGDGCYMCGGVGHFARDCRQN 214
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 41/149 (27%), Positives = 53/149 (35%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASD 478
G C +CG+ H A C+ G R G C++ G H A D
Sbjct: 157 GGGGRPCYSCGEVGHLAKDCRGGSGGNRY---GGGGGRGSG---GDGCYMCGGVGHFARD 210
Query: 479 CPGTDQGN-NLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ-CYICKSFGHLC--C--- 531
C GN + C CG GH C + + + CY C GHL C
Sbjct: 211 CRQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDCDRR 270
Query: 532 -VNSSIIGLKQVSCYNCGQSGHLGPECAN 559
SS G C+ CG+ GH EC +
Sbjct: 271 GSGSSGGGGGSNKCFICGKEGHFARECTS 299
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 47/158 (29%), Positives = 52/158 (32%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF CG H K+C G G + G G C CGD GH C
Sbjct: 96 CFNCGEVGHMAKDCDGGS------GGKSFGGG-GGRRSGGE---GECYMCGDVGHFARDC 145
Query: 507 E----GEYHADDLKKIQCYICKSFGHLC--CVNSSI---------IGLKQVSCYNCGQSG 551
G CY C GHL C S G CY CG G
Sbjct: 146 RQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVG 205
Query: 552 HLGPECA-NSCEALNGKKSNLICYKCGKEGHFARRCGS 588
H +C N + G S CY CG GH A+ C S
Sbjct: 206 HFARDCRQNGGGNVGGGGST--CYTCGGVGHIAKVCTS 241
>FB|FBgn0034802 [details] [associations]
symbol:CG3800 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=ISS;NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
EMBL:AE013599 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K09250
GeneTree:ENSGT00510000047065 OMA:QCYNCGE EMBL:AY075371
EMBL:AY118596 RefSeq:NP_001188992.1 RefSeq:NP_611739.1
UniGene:Dm.5513 ProteinModelPortal:Q8T8R1 SMR:Q8T8R1
MINT:MINT-943666 STRING:Q8T8R1 PaxDb:Q8T8R1 PRIDE:Q8T8R1
EnsemblMetazoa:FBtr0071994 EnsemblMetazoa:FBtr0303464 GeneID:37646
KEGG:dme:Dmel_CG3800 UCSC:CG3800-RA FlyBase:FBgn0034802
InParanoid:Q8T8R1 OrthoDB:EOG40RXZ0 PhylomeDB:Q8T8R1
GenomeRNAi:37646 NextBio:804714 Bgee:Q8T8R1 Uniprot:Q8T8R1
Length = 165
Score = 165 (63.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 440 MQKQNKPCFLCGSFKHRWKNC-KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGD 498
M++ + C+ C F H + C ++ + C+ G H++ DC Q +N + C RC
Sbjct: 50 MRRNREKCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCT---QADNPT---CYRCNK 103
Query: 499 SGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPE 556
+GH + +C + + CY C GH+ C +S K +CY CG+SGHL E
Sbjct: 104 TGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETS----K--TCYGCGKSGHLRRE 157
Query: 557 C 557
C
Sbjct: 158 C 158
Score = 118 (46.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/111 (26%), Positives = 44/111 (39%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD--CFINKGSEHLASD 478
N E C C + H A C + + C+ C H K+C Q + C+ + H +
Sbjct: 53 NREKCYKCNQFGHFARACPEEAER--CYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRN 110
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
CP ++ C +C +GH +C + K CY C GHL
Sbjct: 111 CPEAVNERGPTNVSCYKCNRTGHISKNCP------ETSKT-CYGCGKSGHL 154
Score = 113 (44.8 bits), Expect = 0.00010, P = 0.00010
Identities = 30/120 (25%), Positives = 48/120 (40%)
Query: 519 QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGK 578
+CY C FGH + CY C GH+ +C + N CY+C K
Sbjct: 56 KCYKCNQFGHFARACPE----EAERCYRCNGIGHISKDCTQA--------DNPTCYRCNK 103
Query: 579 EGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGSNGTPHGLGNAQGRENDDQREKG 638
GH+ R C +R + + R +++ ++ T +G G + G + EKG
Sbjct: 104 TGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKS-GHLRRECDEKG 162
>UNIPROTKB|J9NRQ2 [details] [associations]
symbol:ZCCHC13 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AAEX03026520
Ensembl:ENSCAFT00000049751 OMA:EEQKCYS Uniprot:J9NRQ2
Length = 146
Score = 162 (62.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 46/146 (31%), Positives = 61/146 (41%)
Query: 444 NKPCFLCGSFKHRWKNCKQ-GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHD 502
+K CF CG H + C + G S C T NL + C RCG SGH
Sbjct: 3 SKECFRCGRSGHWARGCPRVGGSRGRGARGRGRGSPCSST----NLP-DICYRCGKSGHH 57
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C DL + CY C GH+ C+ ++ CY CG+ GHL A
Sbjct: 58 AKNC-------DLLEDICYNCGRSGHIAKDCIEPK--REREQCCYTCGRPGHL----ARD 104
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
C+ +K CY CG+ GH + C
Sbjct: 105 CDRQEEQK----CYSCGEYGHIQKDC 126
Score = 149 (57.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 35/113 (30%), Positives = 50/113 (44%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H KNC +D N G S H+A DC + C CG GH
Sbjct: 48 CYRCGKSGHHAKNCDLLEDICYNCGRSGHIAKDCI---EPKREREQCCYTCGRPGHLARD 104
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
C+ + ++ +CY C +GH + QV CY CG++GH+ C+
Sbjct: 105 CDRQ------EEQKCYSCGEYGH---IQKDCT---QVKCYRCGETGHVAINCS 145
Score = 131 (51.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 36/114 (31%), Positives = 46/114 (40%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----------EGEYHADDLKKIQ----CYICKSFGHLCCV 532
+SS C RCG SGH C G CY C GH
Sbjct: 1 MSSKECFRCGRSGHWARGCPRVGGSRGRGARGRGRGSPCSSTNLPDICYRCGKSGHHA-K 59
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
N + L+ + CYNCG+SGH+ +C ++ CY CG+ GH AR C
Sbjct: 60 NCDL--LEDI-CYNCGRSGHIAKDCIEP-----KREREQCCYTCGRPGHLARDC 105
Score = 119 (46.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 33/118 (27%), Positives = 49/118 (41%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSE-HLAS 477
+ C CGK H A C + + C+ CG H K+C ++ + C G HLA
Sbjct: 46 DICYRCGKSGHHAKNCDLLEDI--CYNCGRSGHIAKDCIEPKREREQCCYTCGRPGHLAR 103
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
DC ++ C CG+ GH C +++CY C GH+ +N S
Sbjct: 104 DCDRQEEQK------CYSCGEYGHIQKDCT---------QVKCYRCGETGHVA-INCS 145
Score = 106 (42.4 bits), Expect = 0.00011, P = 0.00011
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C CG+ H A C Q++ K C+ CG + H K+C Q + C+ + H+
Sbjct: 83 EPKREREQCCYTCGRPGHLARDCDRQEEQK-CYSCGEYGHIQKDCTQVK-CYRCGETGHV 140
Query: 476 ASDC 479
A +C
Sbjct: 141 AINC 144
>DICTYBASE|DDB_G0293328 [details] [associations]
symbol:DDB_G0293328 "Cellular nucleic acid-binding
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 dictyBase:DDB_G0293328
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AAFI02000201
RefSeq:XP_629203.1 ProteinModelPortal:Q54BY8 STRING:Q54BY8
EnsemblProtists:DDB0191881 GeneID:8629162 KEGG:ddi:DDB_G0293328
InParanoid:Q54BY8 OMA:CKEVGHI ProtClustDB:PTZ00368 Uniprot:Q54BY8
Length = 131
Score = 162 (62.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 464 QDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKK--IQCY 521
+ C+ K H++ +CP + + + C C GH C KK I+CY
Sbjct: 7 KSCYKCKEVGHISRNCPKNPEAGDRA---CYVCNVVGHLSRECPQNPQPTFEKKDPIKCY 63
Query: 522 ICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
C FGH G + CYNCG GH+ +C + G+ + CYKC + GH
Sbjct: 64 QCNGFGHFA--RDCRRG-RDNKCYNCGGLGHISKDCPSPSTRGQGRDAAK-CYKCNQPGH 119
Query: 582 FARRCGSN 589
A+ C N
Sbjct: 120 IAKACPEN 127
Score = 138 (53.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 514 DLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL 571
++K+ CY CK GH+ C + G + +CY C GHL EC + + KK +
Sbjct: 3 EIKEKSCYKCKEVGHISRNCPKNPEAGDR--ACYVCNVVGHLSRECPQNPQPTFEKKDPI 60
Query: 572 ICYKCGKEGHFARRC 586
CY+C GHFAR C
Sbjct: 61 KCYQCNGFGHFARDC 75
Score = 126 (49.4 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 34/126 (26%), Positives = 49/126 (38%)
Query: 443 QNKPCFLCGSFKHRWKNCKQGQD-----CFINKGSEHLASDCPGTDQGNNLSSN--FCLR 495
+ K C+ C H +NC + + C++ HL+ +CP Q + C +
Sbjct: 5 KEKSCYKCKEVGHISRNCPKNPEAGDRACYVCNVVGHLSRECPQNPQPTFEKKDPIKCYQ 64
Query: 496 CGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQ--VSCYNCGQSG 551
C GH C D K CY C GH+ C + S G + CY C Q G
Sbjct: 65 CNGFGHFARDCR---RGRDNK---CYNCGGLGHISKDCPSPSTRGQGRDAAKCYKCNQPG 118
Query: 552 HLGPEC 557
H+ C
Sbjct: 119 HIAKAC 124
Score = 118 (46.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 26/99 (26%), Positives = 41/99 (41%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQ-----NKP--CFLCGSFKHRWKNCKQGQD--CFI 468
P C C H + C Q P C+ C F H ++C++G+D C+
Sbjct: 26 PEAGDRACYVCNVVGHLSRECPQNPQPTFEKKDPIKCYQCNGFGHFARDCRRGRDNKCYN 85
Query: 469 NKGSEHLASDCPG-TDQGNNLSSNFCLRCGDSGHDLSSC 506
G H++ DCP + +G + C +C GH +C
Sbjct: 86 CGGLGHISKDCPSPSTRGQGRDAAKCYKCNQPGHIAKAC 124
>UNIPROTKB|F1NI84 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AADN02013931
IPI:IPI00819060 Ensembl:ENSGALT00000008010 ArrayExpress:F1NI84
Uniprot:F1NI84
Length = 105
Score = 159 (61.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 37/112 (33%), Positives = 49/112 (43%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 9 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 65
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
C+ HAD+ K CY C FGH + +V CY CG++GH+ C
Sbjct: 66 CD---HADEQK---CYSCGEFGH---IQKDCT---KVKCYRCGETGHVAINC 105
Score = 146 (56.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 33/96 (34%), Positives = 47/96 (48%)
Query: 491 NFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQS 550
+ C RCG+SGH C DL++ CY C GH+ ++ CYNCG+
Sbjct: 7 DICYRCGESGHLAKDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKP 59
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GHL +C ++ E +K CY CG+ GH + C
Sbjct: 60 GHLARDCDHADE----QK----CYSCGEFGHIQKDC 87
Score = 139 (54.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/112 (31%), Positives = 48/112 (42%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 7 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 64
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
DC D+ C CG+ GH C K++CY C GH+
Sbjct: 65 DCDHADEQK------CYSCGEFGHIQKDCT---------KVKCYRCGETGHV 101
Score = 114 (45.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 26/88 (29%), Positives = 38/88 (43%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKP--CFLCGSFKHRWKNCKQG--QDCFINKGSEHLASD 478
+ C NCG+ H A CK K+ + C+ CG H ++C Q C+ H+ D
Sbjct: 27 DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 86
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C C RCG++GH +C
Sbjct: 87 CTKVK---------CYRCGETGHVAINC 105
Score = 105 (42.0 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 44 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 101
Query: 476 ASDC 479
A +C
Sbjct: 102 AINC 105
Score = 97 (39.2 bits), Expect = 0.00049, P = 0.00049
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
CY CG+SGHL +C +A CY CG+ GH A+ C ++R
Sbjct: 9 CYRCGESGHLAKDCDLQEDA---------CYNCGRGGHIAKDCKEPKRER 49
>UNIPROTKB|Q8WW36 [details] [associations]
symbol:ZCCHC13 "Zinc finger CCHC domain-containing protein
13" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262
HOVERGEN:HBG000397 EMBL:BC021176 IPI:IPI00397484 RefSeq:NP_976048.1
UniGene:Hs.157231 ProteinModelPortal:Q8WW36 SMR:Q8WW36
IntAct:Q8WW36 MINT:MINT-2879587 PhosphoSite:Q8WW36 DMDM:71152962
PRIDE:Q8WW36 DNASU:389874 Ensembl:ENST00000339534 GeneID:389874
KEGG:hsa:389874 UCSC:uc004ebs.4 CTD:389874 GeneCards:GC0XP073524
HGNC:HGNC:31749 HPA:HPA003382 neXtProt:NX_Q8WW36
PharmGKB:PA134926925 InParanoid:Q8WW36 OMA:SSKECFK PhylomeDB:Q8WW36
GenomeRNAi:389874 NextBio:103180 Bgee:Q8WW36 CleanEx:HS_ZCCHC13
Genevestigator:Q8WW36 GermOnline:ENSG00000187969 Uniprot:Q8WW36
Length = 166
Score = 150 (57.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 45/158 (28%), Positives = 60/158 (37%)
Query: 444 NKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT----------DQGNN-----L 488
+K F CG H + C +G G S C T + G N L
Sbjct: 3 SKDFFACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNCVL 62
Query: 489 SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCG 548
N C CG SGH C+ ++ CY C GHL K+ CY+CG
Sbjct: 63 LGNICYNCGRSGHIAKDCKDPKRE---RRQHCYTCGRLGHLA---RDCDRQKEQKCYSCG 116
Query: 549 QSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ GH+ +CA + CY+CG+ GH A C
Sbjct: 117 KLGHIQKDCAQ-----------VKCYRCGEIGHVAINC 143
Score = 139 (54.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/116 (31%), Positives = 49/116 (42%)
Query: 447 CFLCGSFKHRWKNCKQ-GQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLS 504
C+ CG KNC G C+ N G S H+A DC + C CG GH
Sbjct: 47 CYCCGESGRNAKNCVLLGNICY-NCGRSGHIAKDCKDPKRERR---QHCYTCGRLGHLAR 102
Query: 505 SCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
C+ + K+ +CY C GH + QV CY CG+ GH+ C+ +
Sbjct: 103 DCDRQ------KEQKCYSCGKLGH---IQKDCA---QVKCYRCGEIGHVAINCSKA 146
Score = 116 (45.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 34/110 (30%), Positives = 47/110 (42%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-----GEYHADDLKKIQC-YICKSFGHLCCVNS-----SI 536
+SS CG SGH C G + QC S+ CC S +
Sbjct: 1 MSSKDFFACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNC 60
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L + CYNCG+SGH+ +C + ++ CY CG+ GH AR C
Sbjct: 61 VLLGNI-CYNCGRSGHIAKDCKDP-----KRERRQHCYTCGRLGHLARDC 104
Score = 115 (45.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 26/86 (30%), Positives = 38/86 (44%)
Query: 425 CSNCGKENHTAATCKMQKQNKP--CFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDCP 480
C NCG+ H A CK K+ + C+ CG H ++C ++ Q C+ H+ DC
Sbjct: 67 CYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDCA 126
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSC 506
C RCG+ GH +C
Sbjct: 127 QVK---------CYRCGEIGHVAINC 143
>TAIR|locus:2156647 [details] [associations]
symbol:AT5G52380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 EMBL:AB019226 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR025836 Pfam:PF14392 EMBL:BT025034 IPI:IPI00544651
RefSeq:NP_200051.1 UniGene:At.29618 ProteinModelPortal:Q9FHC2
SMR:Q9FHC2 PRIDE:Q9FHC2 EnsemblPlants:AT5G52380.1 GeneID:835314
KEGG:ath:AT5G52380 TAIR:At5g52380 InParanoid:Q9FHC2 OMA:KLCYNCG
PhylomeDB:Q9FHC2 ProtClustDB:CLSN2686088 Genevestigator:Q9FHC2
Uniprot:Q9FHC2
Length = 268
Score = 159 (61.0 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 47/186 (25%), Positives = 68/186 (36%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD------CFINKG 471
PG +++ G K + CF+C S H K C + + C +
Sbjct: 47 PGSSTDRPQRTGSSTRHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRR 106
Query: 472 SEHLASDCPGTDQGNNLSSN--FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
H +CP + NN SS C CGD+GH LS C K C+ICK GH+
Sbjct: 107 RGHSLKNCP---EKNNESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHI 163
Query: 530 ---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C N I C CG HL +C + + + + G +
Sbjct: 164 SKNCPENKHGIYPMGGCCKVCGSVAHLVKDCPDKFNQESAQPKKTSRFDATPRGKLTKFS 223
Query: 587 GSNFKD 592
G + +D
Sbjct: 224 GDDLED 229
>UNIPROTKB|G4MRA3 [details] [associations]
symbol:MGG_13778 "Zinc finger protein GIS2" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:CM001231 KO:K09250 RefSeq:XP_003710840.1
ProteinModelPortal:G4MRA3 EnsemblFungi:MGG_13778T0 GeneID:5048998
KEGG:mgr:MGG_13778 Uniprot:G4MRA3
Length = 230
Score = 151 (58.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 46/175 (26%), Positives = 70/175 (40%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQ------GQD--CFINKGSEH 474
C NC + H + C + + + K C+ C H +C G + C+ H
Sbjct: 29 CYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCPTLRLSGAGSNGRCYSCGQPGH 88
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNS 534
LA CP + G N+ + G G G A + CY C H +
Sbjct: 89 LARACPNPN-GANMGRGAPVPRGGYGGGYGGRGG--FAGGARPATCYKCGGPNHF----A 141
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI---CYKCGKEGHFARRC 586
+ + CY CG+ GH+ +C A NG N + CY+CG+ GH +R+C
Sbjct: 142 RDCQAQAMKCYACGKLGHISRDCT----APNGGPLNTVGKTCYQCGEAGHISRQC 192
Score = 149 (57.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 42/167 (25%), Positives = 61/167 (36%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASDC 479
C CG H A C + + C+ C H C + + C+ +G H+ +DC
Sbjct: 9 CYKCGNVGHYAEVCSSAE--RLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADC 66
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
P S+ C CG GH +C A+ + G G
Sbjct: 67 PTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGYGGGYGGRGGFAGGA 126
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +CY CG H +C +A+ CY CGK GH +R C
Sbjct: 127 RPATCYKCGGPNHFARDC--QAQAMK-------CYACGKLGHISRDC 164
Score = 147 (56.8 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 38/103 (36%), Positives = 48/103 (46%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVS 543
++LS C +CG+ GH C A+ L CY CK GH C KQ
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSS---AERL----CYNCKQPGHESNGCPLPRTTEAKQ-- 52
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY+C GH+ +C L+G SN CY CG+ GH AR C
Sbjct: 53 CYHCQGLGHVQADCPTL--RLSGAGSNGRCYSCGQPGHLARAC 93
Score = 122 (48.0 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 37/164 (22%), Positives = 59/164 (35%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQK-----QNKPCFLCGSFKHRWKNCKQGQDCFINKG 471
P ++ C +C H A C + N C+ CG H + C + +G
Sbjct: 45 PRTTEAKQCYHCQGLGHVQADCPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRG 104
Query: 472 SEHLASDCPGTDQGNNLSSN-----FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSF 526
+ G G + C +CG H C+ + ++CY C
Sbjct: 105 APVPRGGYGGGYGGRGGFAGGARPATCYKCGGPNHFARDCQAQ-------AMKCYACGKL 157
Query: 527 GHLC--CV--NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNG 566
GH+ C N + +CY CG++GH+ +C A NG
Sbjct: 158 GHISRDCTAPNGGPLNTVGKTCYQCGEAGHISRQCPTKATA-NG 200
Score = 113 (44.8 bits), Expect = 0.00072, P = 0.00072
Identities = 37/146 (25%), Positives = 52/146 (35%)
Query: 445 KPCFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
+ C+ CG+ H + C + C+ K H ++ CP + C C GH
Sbjct: 7 RACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCP---LPRTTEAKQCYHCQGLGHVQ 63
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGL-KQVSCYNCGQSGHLGPECANS 560
+ C + +CY C GHL C N + + + G G G
Sbjct: 64 ADCPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGYGGGYGGR---- 119
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
G CYKCG HFAR C
Sbjct: 120 -GGFAGGARPATCYKCGGPNHFARDC 144
>ASPGD|ASPL0000040986 [details] [associations]
symbol:AN9093 species:162425 "Emericella nidulans"
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0042788 "polysomal ribosome" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 EMBL:BN001306 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 HOGENOM:HOG000186262 EnsemblFungi:CADANIAT00009521
OMA:QAGHISR Uniprot:C8VH53
Length = 233
Score = 151 (58.2 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 46/176 (26%), Positives = 70/176 (39%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCK----QGQD--CFINKGSEHLA 476
C NC + H +++C + + K C+ C H +C G + C+ HLA
Sbjct: 28 CYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCPTLRLNGANGRCYNCSQPGHLA 87
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
+CP G + R G G G Y + CY C H +
Sbjct: 88 RNCPAPASGAPRGTG-APRGGFGG----GFRGGYGGYP-RAATCYKCGGPNHF----ARD 137
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNG---KKSNLICYKCGKEGHFARRCGSN 589
+ + CY CG+ GH+ +C A NG + +CYKC + GH +R C +N
Sbjct: 138 CQAQAMKCYACGKLGHISRDCT----APNGGPLSSAGKVCYKCSQAGHISRDCPNN 189
Score = 140 (54.3 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 36/101 (35%), Positives = 45/101 (44%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH--LCCVNSSIIGLKQVSCY 545
LS C +CG+ GH C +++ CY CK GH C KQ CY
Sbjct: 3 LSRRACYKCGNIGHYAEVCSSS------ERL-CYNCKQPGHESSSCPRPRTTETKQ--CY 53
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
NC GH+ +C LNG +N CY C + GH AR C
Sbjct: 54 NCQGLGHVQADCPTL--RLNG--ANGRCYNCSQPGHLARNC 90
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 36/154 (23%), Positives = 57/154 (37%)
Query: 417 PPGWNSETCSNCGKENHTAATC---KMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSE 473
P ++ C NC H A C ++ N C+ C H +NC +G+
Sbjct: 44 PRTTETKQCYNCQGLGHVQADCPTLRLNGANGRCYNCSQPGHLARNCPAPASG-APRGTG 102
Query: 474 HLASDCPGTDQGNNLS---SNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC 530
G +G + C +CG H C+ + ++CY C GH+
Sbjct: 103 APRGGFGGGFRGGYGGYPRAATCYKCGGPNHFARDCQAQ-------AMKCYACGKLGHIS 155
Query: 531 --CV--NSSIIGLKQVSCYNCGQSGHLGPECANS 560
C N + CY C Q+GH+ +C N+
Sbjct: 156 RDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPNN 189
>WB|WBGene00019537 [details] [associations]
symbol:K08D12.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0046872 GO:GO:0008270 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 OMA:FQFMSSS
GeneTree:ENSGT00510000047065 EMBL:FO081610 GeneID:176979
KEGG:cel:CELE_K08D12.3 UCSC:K08D12.3a.1 CTD:176979 NextBio:894830
RefSeq:NP_741323.1 ProteinModelPortal:Q966I7 SMR:Q966I7
STRING:Q966I7 PRIDE:Q966I7 EnsemblMetazoa:K08D12.3a.1
EnsemblMetazoa:K08D12.3a.2 WormBase:K08D12.3a InParanoid:Q966I7
ArrayExpress:Q966I7 Uniprot:Q966I7
Length = 151
Score = 135 (52.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 43/162 (26%), Positives = 59/162 (36%)
Query: 444 NKPCFLCGSFKHRWKNCKQGQD------------CFINKGSEHLASDCP-----GTDQGN 486
++ C+ C H +NC G+ C+ + + H + DCP G +G
Sbjct: 3 DRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGG 62
Query: 487 NLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYN 546
C CG GH C +G S G K CYN
Sbjct: 63 GGGGGSCYNCGGRGHYSRDCPSARSEGG--------SGGYGGRGGEGRSFGGQK---CYN 111
Query: 547 CGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
CG+SGH+ EC S G CY+C + GH +R C S
Sbjct: 112 CGRSGHISRECTES-----GSAEEKRCYQCQETGHISRDCPS 148
>TAIR|locus:2098164 [details] [associations]
symbol:AT3G43490 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008270 GO:GO:0003676
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AL138644
IPI:IPI00541141 PIR:T47391 RefSeq:NP_189935.1 UniGene:At.53697
ProteinModelPortal:Q9M241 SMR:Q9M241 PaxDb:Q9M241 PRIDE:Q9M241
EnsemblPlants:AT3G43490.1 GeneID:823435 KEGG:ath:AT3G43490
TAIR:At3g43490 PhylomeDB:Q9M241 Genevestigator:Q9M241
Uniprot:Q9M241
Length = 260
Score = 144 (55.7 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 31/88 (35%), Positives = 45/88 (51%)
Query: 387 KDKVEDARKENEAKYNVVLRMLLRKPRYFDP--PGWNSETCSNCGKENHTAATCK-MQKQ 443
+D V ++ E N V+ LLR RYFDP GW TC +CG+++H +C +
Sbjct: 107 EDVVRGEEEDGETTSNSVMTKLLRGARYFDPLDAGW--VTCYSCGEKDHITVSCPTLTNC 164
Query: 444 NKPCFLCGSFKHRWKNCKQGQDCFINKG 471
K CF+C S +H + C + D N G
Sbjct: 165 RKSCFICASLEHGARQCTKVWDIDANLG 192
Score = 43 (20.2 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 101 EAEAPMRRKSSERMRGN-LETQ-----FCAQENDTVNVAEEQGQLGEDDG 144
++E KS+++M+ N LE C + D N+ E+ + E+DG
Sbjct: 68 KSEEVKNSKSNKKMKRNKLEAANEIVTHCVERQDEDNMVEDVVRGEEEDG 117
Score = 39 (18.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 320 TTATITG-ANDGVKSVEMNNLYSLRLEDDKPLSDMRLGRRVEDTVSV 365
T A I AN+ ++ + +S R D+K SD+ V TV V
Sbjct: 18 TVAIIDDEANEDLRLKILEKAFSRRNVDNKLDSDLSFDPGVVSTVMV 64
>TAIR|locus:2005719 [details] [associations]
symbol:AT1G75560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:BT005709
EMBL:AK118306 EMBL:AK175193 EMBL:AK175269 EMBL:AK175304
EMBL:AK175841 EMBL:AK176208 EMBL:AK176516 EMBL:AK176616
EMBL:AK176626 IPI:IPI00543969 RefSeq:NP_001077828.1
RefSeq:NP_565112.1 UniGene:At.34758 ProteinModelPortal:Q8GXC5
SMR:Q8GXC5 PaxDb:Q8GXC5 PRIDE:Q8GXC5 EnsemblPlants:AT1G75560.1
EnsemblPlants:AT1G75560.2 GeneID:843892 KEGG:ath:AT1G75560
TAIR:At1g75560 InParanoid:Q8GXC5 OMA:NEGICHS PhylomeDB:Q8GXC5
ProtClustDB:CLSN2689214 ArrayExpress:Q8GXC5 Genevestigator:Q8GXC5
Uniprot:Q8GXC5
Length = 257
Score = 142 (55.0 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 55/193 (28%), Positives = 76/193 (39%)
Query: 410 RKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFIN 469
++P +F N C+NCG H AA C + + C+ C H NC C
Sbjct: 61 KRPGHFARDCSNVSVCNNCGLPGHIAAECTAESR---CWNCREPGHVASNCSNEGICHSC 117
Query: 470 KGSEHLASDCPGTDQ--GNNLSSNFCLRCG----DSGHDLS--SCEGEYH-ADDLKKIQ- 519
S H A DC +D G+ N C + G D +D + +C H A D +
Sbjct: 118 GKSGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCTNDKACKNCRTSGHIARDCRNDPV 177
Query: 520 CYICKSFGHL---CCVNSSIIGLKQVSCYNCG-QSGHLGPECANSCEALNGKKSNLICYK 575
C IC GH+ C S + + G Q G L + E G + +IC+
Sbjct: 178 CNICSISGHVARHCPKGDSNYSDRGSRVRDGGMQRGGLS-RMSRDRE---GVSAMIICHN 233
Query: 576 CGKEGHFARRCGS 588
CG GH A C S
Sbjct: 234 CGGRGHRAYECPS 246
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/116 (30%), Positives = 57/116 (49%)
Query: 474 HLASDC--PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
+L ++C PG + + + C CG GH + C E +C+ C+ GH+
Sbjct: 55 NLCNNCKRPGHFARDCSNVSVCNNCGLPGHIAAECTAES--------RCWNCREPGHVAS 106
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL-ICYKCGKEGHFARRC 586
N S G+ C++CG+SGH +C+NS + + +L +C C K+GH A C
Sbjct: 107 -NCSNEGI----CHSCGKSGHRARDCSNS----DSRAGDLRLCNNCFKQGHLAADC 153
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 51/182 (28%), Positives = 66/182 (36%)
Query: 392 DARKENE-AKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLC 450
D R +E Y+ R+PR G C+NC + H A C C C
Sbjct: 26 DRRMRSERVSYHDAPSRREREPRRAFSQG---NLCNNCKRPGHFARDCS---NVSVCNNC 79
Query: 451 GSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG-E 509
G H C C+ + H+AS+C +++G C CG SGH C +
Sbjct: 80 GLPGHIAAECTAESRCWNCREPGHVASNC--SNEG------ICHSCGKSGHRARDCSNSD 131
Query: 510 YHADDLKKIQCYICKSFGHL---C-----CVNSSIIGLKQVSCYN------CGQSGHLGP 555
A DL+ C C GHL C C N G C N C SGH+
Sbjct: 132 SRAGDLRL--CNNCFKQGHLAADCTNDKACKNCRTSGHIARDCRNDPVCNICSISGHVAR 189
Query: 556 EC 557
C
Sbjct: 190 HC 191
>ZFIN|ZDB-GENE-030102-2 [details] [associations]
symbol:zcchc7 "zinc finger, CCHC domain containing 7"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 ZFIN:ZDB-GENE-030102-2
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00510000048226 EMBL:BX511134
EMBL:BX284619 EMBL:CR786570 IPI:IPI00996291
Ensembl:ENSDART00000129066 ArrayExpress:F1QLY2 Bgee:F1QLY2
Uniprot:F1QLY2
Length = 627
Score = 144 (55.7 bits), Expect = 5.9e-07, Sum P(3) = 5.9e-07
Identities = 40/137 (29%), Positives = 55/137 (40%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPG 481
S TC NC K H + C K+ C LCG H + C + C H + DC
Sbjct: 273 SITCRNCNKTGHLSKNCPTLKKVPCCSLCGLRGHLLRTCPN-RHCSNCSLPGHTSDDC-- 329
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
++ C RCG +GH + +C + L I KS C K+
Sbjct: 330 LERA--FWYKRCHRCGMTGHFIDACPQIWRQYHLTTTAGPIRKSADPKACQ-------KR 380
Query: 542 VSCYNCGQSGHLGPECA 558
CYNC + GH G +C+
Sbjct: 381 AYCYNCSRKGHFGHQCS 397
Score = 53 (23.7 bits), Expect = 5.9e-07, Sum P(3) = 5.9e-07
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 270 PMPMVRVVGGNDGGNSFEVIDLCLSSTDDDKSV 302
P P V V+ + G +SF V D ST+DD+SV
Sbjct: 97 PAPPVDVIVIDSGPDSFTVSD----STEDDESV 125
Score = 38 (18.4 bits), Expect = 5.9e-07, Sum P(3) = 5.9e-07
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 81 DSLYREVADLTGFENLKAMIEAEAPMRRKSSERMRGNLETQFCAQENDTVNVAEEQGQL 139
D LYR+ D +G + ++E R S ++ N E Q +E+ V Q QL
Sbjct: 38 DELYRDEEDSSGLSDS----DSELEFRLYS--QLHYNAEFQENHEESSKVQPLVPQTQL 90
>MGI|MGI:1916335 [details] [associations]
symbol:Zcchc9 "zinc finger, CCHC domain containing 9"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010923 "negative regulation of
phosphatase activity" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 MGI:MGI:1916335 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 HOGENOM:HOG000059608 CTD:84240 HOVERGEN:HBG056034
EMBL:BC010687 EMBL:BC024496 IPI:IPI00122218 RefSeq:NP_663428.2
UniGene:Mm.52356 ProteinModelPortal:Q8R1J3 SMR:Q8R1J3
PhosphoSite:Q8R1J3 PRIDE:Q8R1J3 GeneID:69085 KEGG:mmu:69085
UCSC:uc007rkb.1 InParanoid:Q8R1J3 NextBio:328566 Bgee:Q8R1J3
CleanEx:MM_ZCCHC9 Genevestigator:Q8R1J3
GermOnline:ENSMUSG00000021621 Uniprot:Q8R1J3
Length = 273
Score = 133 (51.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 36/154 (23%), Positives = 63/154 (40%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H++S C +
Sbjct: 125 KNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
+C++C GHL C N+ + SC CG H +C N +I
Sbjct: 185 KCFVCGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDCRE-----NQNSDRIITV- 238
Query: 576 CGKEGHFARRCGSNFKDRLRISDLLFTAERPPTR 609
G +A+ ++++D L + L ++P T+
Sbjct: 239 ----GRWAKGMSADYEDVLDVPKL----QKPKTK 264
>UNIPROTKB|Q8N567 [details] [associations]
symbol:ZCCHC9 "Zinc finger CCHC domain-containing protein
9" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010923 "negative regulation of phosphatase activity"
evidence=IDA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
EMBL:CH471084 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 HOGENOM:HOG000059608 EMBL:AK314160 EMBL:AL512712
EMBL:BC032736 IPI:IPI00410284 RefSeq:NP_001124507.1
RefSeq:NP_001124508.1 RefSeq:NP_115656.1 UniGene:Hs.15536
ProteinModelPortal:Q8N567 SMR:Q8N567 IntAct:Q8N567
PhosphoSite:Q8N567 DMDM:116242852 PaxDb:Q8N567 PRIDE:Q8N567
Ensembl:ENST00000254037 Ensembl:ENST00000380199
Ensembl:ENST00000407610 Ensembl:ENST00000438268 GeneID:84240
KEGG:hsa:84240 UCSC:uc003khi.3 CTD:84240 GeneCards:GC05P080597
HGNC:HGNC:25424 HPA:HPA038404 neXtProt:NX_Q8N567
PharmGKB:PA134931870 HOVERGEN:HBG056034 InParanoid:Q8N567
OMA:DSQEVRE OrthoDB:EOG49W2G3 PhylomeDB:Q8N567 GenomeRNAi:84240
NextBio:73713 Bgee:Q8N567 CleanEx:HS_ZCCHC9 Genevestigator:Q8N567
GermOnline:ENSG00000131732 Uniprot:Q8N567
Length = 271
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/105 (25%), Positives = 45/105 (42%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
>POMBASE|SPAC683.02c [details] [associations]
symbol:SPAC683.02c "zf-CCHC type zinc finger protein"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 PomBase:SPAC683.02c
EMBL:CU329670 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
PIR:T50246 RefSeq:NP_594481.1 EnsemblFungi:SPAC683.02c.1
GeneID:2543491 KEGG:spo:SPAC683.02c HOGENOM:HOG000059608
OMA:FICHENG OrthoDB:EOG4P8JTN NextBio:20804503 Uniprot:Q9HFF2
Length = 218
Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 31/95 (32%), Positives = 43/95 (45%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF + H+ DCP + +N+S C RCG H L++C + LK +C+IC
Sbjct: 79 CFACRQQGHIVQDCP--EAKDNVS--ICFRCGSKEHSLNACSKK---GPLKFAKCFICHE 131
Query: 526 FGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
GHL C N + K C C HL +C
Sbjct: 132 NGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDC 166
>UNIPROTKB|E1BZR6 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010923 "negative
regulation of phosphatase activity" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0010923 CTD:84240 OMA:DSQEVRE
GeneTree:ENSGT00510000047308 EMBL:AADN02047870 IPI:IPI00571897
RefSeq:XP_424900.1 UniGene:Gga.34920 Ensembl:ENSGALT00000025157
GeneID:427320 KEGG:gga:427320 NextBio:20828598 Uniprot:E1BZR6
Length = 235
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 27/102 (26%), Positives = 42/102 (41%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYH--ADDLKKI 518
K CF + H +DCP + ++ + C RCG + HD+ C+ +
Sbjct: 90 KNAMVCFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDIGKCKAKIDPAVGAFPYA 149
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+C+IC GHL C N + + C CG H +C
Sbjct: 150 KCFICGEMGHLSRSCPDNPKGLYAEGGCCRLCGSVEHYRKDC 191
Score = 122 (48.0 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 26/102 (25%), Positives = 43/102 (42%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C---VNSSIIGLKQVSCYNC 547
C C + GH ++ C + D+ CY C S H C ++ ++ C+ C
Sbjct: 95 CFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDIGKCKAKIDPAVGAFPYAKCFIC 154
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
G+ GHL C ++ + L + C CG H+ + C N
Sbjct: 155 GEMGHLSRSCPDNPKGLYAEGG--CCRLCGSVEHYRKDCPEN 194
>UNIPROTKB|F1ML79 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
OMA:DSQEVRE GeneTree:ENSGT00510000047308 EMBL:DAAA02021025
IPI:IPI00689669 UniGene:Bt.61596 Ensembl:ENSBTAT00000006931
Uniprot:F1ML79
Length = 271
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 26/105 (24%), Positives = 44/105 (41%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + + + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H+ +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPES 229
>UNIPROTKB|F6V033 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
CTD:84240 OMA:DSQEVRE GeneTree:ENSGT00510000047308
EMBL:AAEX03002099 RefSeq:XP_536305.1 Ensembl:ENSCAFT00000013818
GeneID:479161 KEGG:cfa:479161 Uniprot:F6V033
Length = 271
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 42/183 (22%), Positives = 71/183 (38%)
Query: 385 EAKDKVEDARKE--NEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQK 442
+AK K +KE NE N + L + P+ N E + +E ++K
Sbjct: 55 KAKHKKNKKKKEYLNE-DVNGFMEYLRQNPQMIH----NGEMIATDSQEVREEIAIALKK 109
Query: 443 QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHD 502
++ G R K CF + H +DCP + ++ + C RCG + H+
Sbjct: 110 DSRRE---GRRLKRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHE 166
Query: 503 LSSCEGEYHA--DDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
++ C+ + + +C++C GHL C N + C CG H +C
Sbjct: 167 ITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDC 226
Query: 558 ANS 560
S
Sbjct: 227 PES 229
Score = 115 (45.5 bits), Expect = 0.00066, P = 0.00066
Identities = 30/108 (27%), Positives = 43/108 (39%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C---VNSSIIGLKQVSCYNC 547
C C GH ++ C D+ CY C S H C V+ ++ C+ C
Sbjct: 130 CFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVC 189
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG-SNFKDRL 594
G+ GHL C ++ + L C CG HF + C S DR+
Sbjct: 190 GEMGHLSRSCPDNPKGLYADGG--CCRLCGSVEHFKKDCPESQNSDRM 235
>ZFIN|ZDB-GENE-031030-9 [details] [associations]
symbol:zcchc9 "zinc finger, CCHC domain containing 9"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 ZFIN:ZDB-GENE-031030-9 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR025836 Pfam:PF14392 HOGENOM:HOG000059608 CTD:84240
HOVERGEN:HBG056034 OrthoDB:EOG49W2G3 EMBL:BC049028 IPI:IPI00484605
RefSeq:NP_938184.1 UniGene:Dr.79609 ProteinModelPortal:Q7ZUI6
STRING:Q7ZUI6 GeneID:386639 KEGG:dre:386639 InParanoid:Q7ZUI6
NextBio:20813967 ArrayExpress:Q7ZUI6 Uniprot:Q7ZUI6
Length = 256
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/108 (27%), Positives = 46/108 (42%)
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C---VNSSIIG 538
Q S+ C C GH L+ C + +++ + CY C S H C V+ ++
Sbjct: 108 QNTKKSNMICFNCRKPGHGLADCPEANNDEEMGRGICYRCGSTEHEIQRCRAKVDPAMGN 167
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C+ CGQ+GHL C ++ + L C CG HF + C
Sbjct: 168 YPYAKCFVCGQTGHLSKACPDNPKGLYAAGG--CCRVCGSVEHFQKDC 213
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 31/121 (25%), Positives = 48/121 (39%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + + C RCG + H++ C + +
Sbjct: 112 KSNMICFNCRKPGHGLADCPEANNDEEMGRGICYRCGSTEHEIQRCRAKVDPAMGNYPYA 171
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECA---NSCEALN-GKKSNL 571
+C++C GHL C N + C CG H +C NS ++ G+ SN
Sbjct: 172 KCFVCGQTGHLSKACPDNPKGLYAAGGCCRVCGSVEHFQKDCPEHQNSTNSITLGRLSNR 231
Query: 572 I 572
I
Sbjct: 232 I 232
>RGD|1307450 [details] [associations]
symbol:Zcchc9 "zinc finger, CCHC domain containing 9"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA;ISO] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 RGD:1307450 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0010923
EMBL:CH473955 HOGENOM:HOG000059608 CTD:84240 HOVERGEN:HBG056034
OMA:DSQEVRE OrthoDB:EOG49W2G3 GeneTree:ENSGT00510000047308
EMBL:BC083695 IPI:IPI00555221 RefSeq:NP_001013174.1
UniGene:Rn.94285 Ensembl:ENSRNOT00000020111 GeneID:309986
KEGG:rno:309986 UCSC:RGD:1307450 InParanoid:Q5XII6 NextBio:661527
Genevestigator:Q5XII6 Uniprot:Q5XII6
Length = 271
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 25/102 (24%), Positives = 42/102 (41%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C +
Sbjct: 125 KNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMTKCRANVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+C++C GHL C N+ + C CG H +C
Sbjct: 185 KCFVCGEMGHLSRSCPDNTKGVYADGGGCKLCGSVEHFKKDC 226
Score = 123 (48.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 30/108 (27%), Positives = 43/108 (39%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH---LCCVN-SSIIG-LKQVSCYNC 547
C C GH ++ C + D+ CY C S H C N +G C+ C
Sbjct: 130 CFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMTKCRANVDPALGEFPFAKCFVC 189
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK-DRL 594
G+ GHL C ++ + + C CG HF + C N DR+
Sbjct: 190 GEMGHLSRSCPDNTKGVYADGGG--CKLCGSVEHFKKDCPENQNSDRI 235
>TAIR|locus:2078526 [details] [associations]
symbol:AT3G42860 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0010212 "response to ionizing radiation"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR001878
InterPro:IPR010666 Pfam:PF00098 Pfam:PF06839 PROSITE:PS50158
SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:AL138654 EMBL:AY065276 EMBL:AY133785
IPI:IPI00532574 PIR:T47344 RefSeq:NP_189872.1 UniGene:At.28534
ProteinModelPortal:Q9M1L9 SMR:Q9M1L9 EnsemblPlants:AT3G42860.1
GeneID:823332 KEGG:ath:AT3G42860 TAIR:At3g42860
HOGENOM:HOG000006218 InParanoid:Q9M1L9 OMA:CGFFKWC PhylomeDB:Q9M1L9
ProtClustDB:CLSN2684249 ArrayExpress:Q9M1L9 Genevestigator:Q9M1L9
Uniprot:Q9M1L9
Length = 372
Score = 127 (49.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 45/144 (31%), Positives = 65/144 (45%)
Query: 457 WKNCKQGQDCFINKGSE-HLASDCP-GTDQG---NNLSSNFCLRCGDSGHDLSSCEGEYH 511
++N K G C+ G E H A DC +D G + ++ C +CG GH C +
Sbjct: 230 YQNAKTGTPCY-KCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTAQSG 288
Query: 512 ADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC---ANSCEALNGK- 567
+ Q KS SS G CY CG+ GH +C +++ + +G+
Sbjct: 289 NPKYEPGQM---KS--------SSSSG----ECYKCGKQGHWSRDCTGQSSNQQFQSGQA 333
Query: 568 KSNLI---CYKCGKEGHFARRCGS 588
KS CYKCGK GH++R C S
Sbjct: 334 KSTSSTGDCYKCGKAGHWSRDCTS 357
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 45/168 (26%), Positives = 63/168 (37%)
Query: 416 DPPGW-NSET---CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKG 471
D G+ N++T C CGKE H A C +Q P K+ DCF
Sbjct: 226 DTRGYQNAKTGTPCYKCGKEGHWARDCTVQSDTGPV----------KSTSAAGDCFKCGK 275
Query: 472 SEHLASDC------PGTDQG---NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
H + DC P + G ++ SS C +CG GH C G+ + Q
Sbjct: 276 PGHWSRDCTAQSGNPKYEPGQMKSSSSSGECYKCGKQGHWSRDCTGQSSNQQFQSGQAKS 335
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN--GKK 568
S G CY CG++GH +C + + N GK+
Sbjct: 336 TSSTG---------------DCYKCGKAGHWSRDCTSPAQTTNTPGKR 368
>UNIPROTKB|P05960 [details] [associations]
symbol:gag-pol "Gag-Pol polyprotein" species:11687 "Human
immunodeficiency virus type 1 (CDC-451 ISOLATE)" [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006278 "RNA-dependent DNA replication" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0019061
"uncoating of virus" evidence=TAS] [GO:0030260 "entry into host
cell" evidence=TAS] InterPro:IPR000071 InterPro:IPR000721
InterPro:IPR001878 InterPro:IPR001969 InterPro:IPR001995
InterPro:IPR008916 InterPro:IPR008919 InterPro:IPR010999
InterPro:IPR012344 Pfam:PF00098 Pfam:PF00540 Pfam:PF00607
PRINTS:PR00234 PROSITE:PS00141 PROSITE:PS50158 PROSITE:PS50175
SMART:SM00343 GO:GO:0005829 Reactome:REACT_116125 GO:GO:0005654
GO:GO:0030430 GO:GO:0016020 GO:GO:0046872 GO:GO:0005198
GO:GO:0008270 GO:GO:0006508 GO:GO:0003723 GO:GO:0020002
GO:GO:0006278 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0030260
GO:GO:0004190 Gene3D:2.40.70.10 InterPro:IPR021109 SUPFAM:SSF50630
GO:GO:0042025 GO:GO:0019028 Gene3D:1.10.1200.30 Gene3D:1.10.150.90
Gene3D:1.10.375.10 SUPFAM:SSF47353 SUPFAM:SSF47943 SUPFAM:SSF47836
GO:GO:0019061 EMBL:M13136 InterPro:IPR018061 Pfam:PF00077
GO:GO:0046797 ProteinModelPortal:P05960 SMR:P05960 Uniprot:P05960
Length = 550
Score = 129 (50.5 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 37/103 (35%), Positives = 50/103 (48%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C+A KK C+KCG+EGH + C + LR DL
Sbjct: 388 KTVKCFNCGKEGHI----ARNCKAPR-KKG---CWKCGREGHQMKDCTERQANFLR-EDL 438
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P +AR F +N G GR+N+ E G
Sbjct: 439 AF----PQGKAREFSSEQTRANSPTRGELQVWGRDNNSLSEAG 477
>UNIPROTKB|F1RF07 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 CTD:84240 OMA:DSQEVRE GeneTree:ENSGT00510000047308
EMBL:CU928538 RefSeq:NP_001231149.1 UniGene:Ssc.1803
Ensembl:ENSSSCT00000015433 GeneID:100514154 KEGG:ssc:100514154
Uniprot:F1RF07
Length = 270
Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 26/105 (24%), Positives = 42/105 (40%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + + + C RCG + H++ C+ + +
Sbjct: 124 KNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEIIKCKAQVDPALGEFPFA 183
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H +C S
Sbjct: 184 KCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPES 228
>UNIPROTKB|P12498 [details] [associations]
symbol:gag-pol "Gag-Pol polyprotein" species:11694 "Human
immunodeficiency virus type 1 (JH3 ISOLATE)" [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006278 "RNA-dependent DNA replication" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0019061
"uncoating of virus" evidence=TAS] [GO:0030260 "entry into host
cell" evidence=TAS] InterPro:IPR000071 InterPro:IPR000721
InterPro:IPR001878 InterPro:IPR001969 InterPro:IPR001995
InterPro:IPR008916 InterPro:IPR008919 InterPro:IPR010999
InterPro:IPR012344 Pfam:PF00098 Pfam:PF00540 Pfam:PF00607
PRINTS:PR00234 PROSITE:PS00141 PROSITE:PS50158 PROSITE:PS50175
SMART:SM00343 GO:GO:0005829 Reactome:REACT_116125 GO:GO:0005654
GO:GO:0030430 GO:GO:0016020 GO:GO:0046872 GO:GO:0005198
GO:GO:0008270 GO:GO:0006508 GO:GO:0003723 GO:GO:0020002
GO:GO:0006278 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0030260
GO:GO:0004190 Gene3D:2.40.70.10 InterPro:IPR021109 SUPFAM:SSF50630
GO:GO:0042025 GO:GO:0019028 Gene3D:1.10.1200.30 Gene3D:1.10.150.90
Gene3D:1.10.375.10 SUPFAM:SSF47353 SUPFAM:SSF47943 SUPFAM:SSF47836
GO:GO:0019061 EMBL:M21137 InterPro:IPR018061 Pfam:PF00077
GO:GO:0046797 ProteinModelPortal:P12498 SMR:P12498 Uniprot:P12498
Length = 532
Score = 128 (50.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 34/99 (34%), Positives = 46/99 (46%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K + C+NCG+ GHL A +C A KK C+KCGKEGH + C + LR DL
Sbjct: 388 KIIKCFNCGKEGHL----ARNCRAPR-KKG---CWKCGKEGHQMKDCNERQANFLR-EDL 438
Query: 600 LFTAERPPTRARHFVGSNGTPHGLGNAQGRENDDQREKG 638
F + + +N G GR+N+ E G
Sbjct: 439 AFLQGKAREFSSEQTRANSPSRGELQVWGRDNNPLSEAG 477
>UNIPROTKB|Q22Z19 [details] [associations]
symbol:TTHERM_00115500 "Putative uncharacterized protein"
species:312017 "Tetrahymena thermophila SB210" [GO:0004252
"serine-type endopeptidase activity" evidence=ISS]
InterPro:IPR001368 PROSITE:PS00652 GO:GO:0004252 InterPro:IPR006212
InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184 EMBL:GG662798
RefSeq:XP_001010747.1 ProteinModelPortal:Q22Z19
EnsemblProtists:EAR90502 GeneID:7845700 KEGG:tet:TTHERM_00115500
Uniprot:Q22Z19
Length = 1163
Score = 132 (51.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 53/191 (27%), Positives = 71/191 (37%)
Query: 417 PPGW-NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQ---DCFINKGS 472
P G+ N T + C + T TC KQN C C + R+ N Q C N+
Sbjct: 702 PDGFFNDNTNNTCSPCDSTCFTCNGSKQNN-CLSCQN--KRYFNPLSNQCVYTCNSNQYP 758
Query: 473 EHLASDCPGTDQG----NNLSSNFCLRC-GDSGHDLSSCEGEYHADDLKKIQCYICKSFG 527
+ ++ C D N +S FC C ++ + C Y+ I C C
Sbjct: 759 DQTSNQCKSCDTSCLTCNGPTSQFCTSCINENNQCVQKCSQNYYVQPNTNI-CQQC---- 813
Query: 528 HLCCVNSSIIGLKQVSCYNCGQS-----GHLGPECANSCEALNG--KKSNLIC-YKC--G 577
H C+ S G C +C S EC N L G KK ++C YKC G
Sbjct: 814 HNSCLTCS--GPSSKECTSCVSSLIFINSQCYSECPNGYYTLQGQQKKECILCNYKCNLG 871
Query: 578 KEGHFARRCGS 588
G A C S
Sbjct: 872 CSGELAEDCDS 882
>ZFIN|ZDB-GENE-030131-755 [details] [associations]
symbol:si:dkeyp-113d7.1 "si:dkeyp-113d7.1"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 ZFIN:ZDB-GENE-030131-755
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60
HSSP:P08046 EMBL:AY571341 IPI:IPI00511646 RefSeq:NP_999959.1
UniGene:Dr.31865 ProteinModelPortal:Q6PY44 PRIDE:Q6PY44
GeneID:407709 KEGG:dre:407709 HOVERGEN:HBG097723 InParanoid:Q6PY44
NextBio:20818567 ArrayExpress:Q6PY44 Bgee:Q6PY44 Uniprot:Q6PY44
Length = 498
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 63/246 (25%), Positives = 98/246 (39%)
Query: 410 RKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQ----NKP--CFLCGSFKHRWKNCKQG 463
RKPR +P G +C+ CGK T K K+ +P C CG + N K+
Sbjct: 251 RKPR--NPTGEKPFSCTQCGKNFSTLGNLKTHKRIHTGERPYTCSQCGKSFGQAGNLKRH 308
Query: 464 QDCFINKGSE-HLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCY 521
Q I+ G + + + CP G + ++L S+ L G+ + C + K+++ +
Sbjct: 309 Q--LIHTGQKPYTCAHCPKGFTKADDLRSHQRLHTGEKPFSCAECGKSF--SQTKELKAH 364
Query: 522 ICKSFGH--LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
G CC K+ S Y Q H+G E SC SN K ++
Sbjct: 365 QLSHTGERPFCCSLCGKSFSKETS-YRNHQQIHMG-EKPYSCSQCGKSFSNSGVLKTHEK 422
Query: 580 GHFARR------CGSNFK--DRLRISDLLFTAERPPTRARHFVGSNGTPHGLGNAQGREN 631
H R CG +F L+ + T ERP T + G N + G + + E
Sbjct: 423 IHSGERPFGCTQCGKHFGRLGHLKAHQQIHTGERPYTCQQ--CGKNFSQSG--HLKAHEQ 478
Query: 632 DDQREK 637
+RE+
Sbjct: 479 IHKRER 484
>WB|WBGene00017210 [details] [associations]
symbol:F07E5.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0006898
GO:GO:0040010 GO:GO:0046872 GO:GO:0008270 GO:GO:0040011
GO:GO:0003676 GO:GO:0040035 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:FO080110 PIR:T34410 RefSeq:NP_494168.1
ProteinModelPortal:P91223 SMR:P91223 STRING:P91223 PaxDb:P91223
EnsemblMetazoa:F07E5.5 GeneID:173564 KEGG:cel:CELE_F07E5.5
UCSC:F07E5.5 CTD:173564 WormBase:F07E5.5
GeneTree:ENSGT00510000047308 HOGENOM:HOG000021839 InParanoid:P91223
OMA:INDWRAA NextBio:880195 Uniprot:P91223
Length = 384
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 36/140 (25%), Positives = 62/140 (44%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
G CF + H +DCP + ++ S C +CG H + C+ + C++
Sbjct: 228 GSACFHCREPGHRLADCP--KRNSSSSDGVCFKCGSMEHSIHECKKK-GVKGFPYATCFV 284
Query: 523 CKSFGHLC--CVNSSIIGL-KQVSCYN-CGQSGHLGPECANSCEALNGKKSNLICYKCGK 578
CK GH+ C + ++ G+ C N CG + HL +C L +K+ ++ K
Sbjct: 285 CKQVGHISRDC-HQNVNGVYPDGGCCNVCGANTHLRRDCPE----LAAQKAGGAHFE--K 337
Query: 579 EGHFARRCGSNFKDRLRISD 598
+ HF R SN+ + +D
Sbjct: 338 K-HFTARAASNWNTQSADAD 356
>WB|WBGene00043995 [details] [associations]
symbol:F40F12.9 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:Z30215
GeneTree:ENSGT00390000010943 RefSeq:NP_001255048.1
ProteinModelPortal:D5MCP3 SMR:D5MCP3 EnsemblMetazoa:F40F12.9a.1
EnsemblMetazoa:F40F12.9a.2 GeneID:259311 KEGG:cel:CELE_F40F12.9
CTD:259311 WormBase:F40F12.9a Uniprot:D5MCP3
Length = 113
Score = 100 (40.3 bits), Expect = 0.00024, P = 0.00024
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
SS+ L+Q CYNC + GH+ +C ++ C+KCG GH+ R C S + +
Sbjct: 19 SSMHNLEQSICYNCHKLGHMSRDCP--------EEQPKACFKCGFRGHYYRECPSQIEKK 70
>UNIPROTKB|Q23JG1 [details] [associations]
symbol:TTHERM_00979960 "Putative uncharacterized protein"
species:312017 "Tetrahymena thermophila SB210" [GO:0004252
"serine-type endopeptidase activity" evidence=ISS]
InterPro:IPR000742 InterPro:IPR001577 SMART:SM00181 GO:GO:0016020
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0004252 InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261
SUPFAM:SSF57184 PANTHER:PTHR10942 ProtClustDB:CLSZ2500114
EMBL:GG662689 RefSeq:XP_001016928.2 ProteinModelPortal:Q23JG1
EnsemblProtists:EAR96683 GeneID:7846896 KEGG:tet:TTHERM_00979960
Uniprot:Q23JG1
Length = 549
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 45/168 (26%), Positives = 72/168 (42%)
Query: 421 NSETCSNCGKENHT---AATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLAS 477
+++TC C N ++C + KPC C S +C ++ K ++ +A
Sbjct: 330 DAKTCIQCDSSNGYRLYGSSCTIC--TKPCATCSSIDP--SSCLSCENSLYLKNNQCVAI 385
Query: 478 DCP-GTDQGNNLSSNFCLR----CGDSGHDLSSCEGEYHADDLKKIQ-CYICKSFGHLCC 531
CP G G+N + CL+ C D G+ +C +Y K Q C +S C
Sbjct: 386 -CPKGYFNGSNYICSLCLKGCDECSD-GNSCKTCNSKYKPFTYKNQQVCINSQSCFSPC- 442
Query: 532 VNSSIIGLKQ-VSCYNCGQSGHL-GPECANSC-EALNGKKSNLICYKC 576
S+ IG Q +C +C + +L G C C + G +SN C +C
Sbjct: 443 --STCIGSFQPATCASCNPNFYLQGTSCVAKCNQGYYGNQSNQTCTQC 488
>UNIPROTKB|F1ST82 [details] [associations]
symbol:ZCCHC7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000048226 KO:K12597 OMA:EAQIANN EMBL:CU855828
EMBL:CU861930 RefSeq:XP_003122068.1 Ensembl:ENSSSCT00000005885
GeneID:100520354 KEGG:ssc:100520354 Uniprot:F1ST82
Length = 545
Score = 121 (47.7 bits), Expect = 0.00050, P = 0.00050
Identities = 38/136 (27%), Positives = 50/136 (36%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG--QDCFINKGSEHLASDCPG 481
TC NC K H + C ++ +PC LC H C DC + S H + P
Sbjct: 242 TCRNCNKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPARFCLDCSLPMSSAHRCLERPS 301
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
+ C RC GH +C + Q ++ G +
Sbjct: 302 WRKR-------CDRCDMIGHYADACPEIWR-------QYHLTTKPGPPKKPKTPSGQSTL 347
Query: 542 VSCYNCGQSGHLGPEC 557
V CYNCGQ GH G EC
Sbjct: 348 VYCYNCGQEGHYGHEC 363
>ASPGD|ASPL0000046912 [details] [associations]
symbol:AN1944 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:BN001307
GO:GO:0008270 GO:GO:0003676 EMBL:AACD01000029 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K12597 RefSeq:XP_659548.1
EnsemblFungi:CADANIAT00008604 GeneID:2875623 KEGG:ani:AN1944.2
HOGENOM:HOG000192719 OMA:SASEIPC OrthoDB:EOG498Z8B Uniprot:Q5BBY6
Length = 690
Score = 112 (44.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 33/118 (27%), Positives = 51/118 (43%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSF-KHRWKNCKQGQDCFINKGSEHLASDCPGT 482
TC C +E H A C ++ C CG++ KH+ C + + C +G H A DCP
Sbjct: 361 TCMECLQEGHLAEVCPTRE----CVHCGAWNKHQSSLCPKFRRCQRCRGRGHDAKDCPSA 416
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCE--GEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
+ ++ S C CG + H C+ + D + + S H C N +IG
Sbjct: 417 LK-SSASEIPCDLCGSADHLEYDCDYLWKLPRQDTTSLPVLVSISCAH-CTSNRHLIG 472
Score = 56 (24.8 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 26/109 (23%), Positives = 46/109 (42%)
Query: 233 KVVEVSKPESVLTT---------EMDGSRHLFIDPAKDNEGASMGEPMPMVRVVGGNDGG 283
K VE K E+ +T E++G + + D D+ G+ E + + G+ G
Sbjct: 195 KTVEEGKSETAVTDDNDVQIEDGEVNGVQEVSADSQSDDSGSLDSEADDSIMLNIGSRGQ 254
Query: 284 NSFEVIDLCLSSTDDDKSVSGVSLERSVEDMGKAVQTTATITGAN-DGV 331
N + D+ + +DDD G + + + T + G+N DGV
Sbjct: 255 NRSQH-DV-IQISDDDSDSEGDGYDPESLSVSQTPATVNILDGSNGDGV 301
>WB|WBGene00001601 [details] [associations]
symbol:glh-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0008432 "JUN kinase binding" evidence=IPI]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0042127 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0007276
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:AF079508 EMBL:FO081191 PIR:T32759 PIR:T43326
RefSeq:NP_491207.3 ProteinModelPortal:O76743 SMR:O76743
IntAct:O76743 STRING:O76743 PaxDb:O76743 PRIDE:O76743
EnsemblMetazoa:T12F5.3.1 EnsemblMetazoa:T12F5.3.2 GeneID:171941
KEGG:cel:CELE_T12F5.3 UCSC:T12F5.3.1 CTD:171941 WormBase:T12F5.3
InParanoid:O76743 NextBio:873335 Uniprot:O76743
Length = 1156
Score = 123 (48.4 bits), Expect = 0.00079, P = 0.00079
Identities = 41/154 (26%), Positives = 63/154 (40%)
Query: 457 WKNCKQGQDCFINKGSE-HLASDCPGTDQGNNLSSNF-CLRCGDSGHDLSSCEGEYHADD 514
W ++ + C N G E H++ +C D+ F C C GH S C+
Sbjct: 563 WDGGERPRGCH-NCGEEGHISKEC---DKPK--VPRFPCRNCEQLGHFASDCD----QPR 612
Query: 515 LKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICY 574
+ + C C GH V+ + + C NCGQ GH +C N + + C
Sbjct: 613 VPRGPCRNCGIEGHFA-VDCDQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEP---CR 668
Query: 575 KCGKEGHFARRCGSNFKDR----LRISDLLFTAE 604
+C +EGH+ C + KD L D +FT +
Sbjct: 669 RCAEEGHWGYECPTRPKDLQGNFLESYDFVFTPD 702
>UNIPROTKB|Q9H1U4 [details] [associations]
symbol:MEGF9 "Multiple epidermal growth factor-like domains
protein 9" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001368
SMART:SM00208 GO:GO:0016021 EMBL:CH471090 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 EMBL:AL138836 EMBL:AK295380 EMBL:AY358370
EMBL:AB011542 IPI:IPI00401283 RefSeq:NP_001073966.2
UniGene:Hs.741238 ProteinModelPortal:Q9H1U4 SMR:Q9H1U4
STRING:Q9H1U4 PhosphoSite:Q9H1U4 DMDM:116242627 PaxDb:Q9H1U4
PRIDE:Q9H1U4 DNASU:1955 Ensembl:ENST00000373930 GeneID:1955
KEGG:hsa:1955 UCSC:uc022bms.1 CTD:1955 GeneCards:GC09M123363
HGNC:HGNC:3234 HPA:HPA014319 MIM:604268 neXtProt:NX_Q9H1U4
eggNOG:NOG302694 HOGENOM:HOG000234343 HOVERGEN:HBG080442
InParanoid:Q9H1U4 OrthoDB:EOG43R3MN PhylomeDB:Q9H1U4
GenomeRNAi:1955 NextBio:7923 ArrayExpress:Q9H1U4 Bgee:Q9H1U4
CleanEx:HS_MEGF9 Genevestigator:Q9H1U4 GermOnline:ENSG00000106780
Uniprot:Q9H1U4
Length = 602
Score = 119 (46.9 bits), Expect = 0.00094, P = 0.00094
Identities = 44/167 (26%), Positives = 62/167 (37%)
Query: 420 WNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
+ S C C H A + K G C+ G F G L C
Sbjct: 246 YTSGLCQPCDCSPHGALSIPCNSSGKCQCKVGVIGSICDRCQDGYYGFSKNGC--LPCQC 303
Query: 480 PGTDQGNNLSSNFCLRCGDS--GHDLSSC-EGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
+ + CL C ++ G+ C EG Y + D K +C C + SI
Sbjct: 304 NNRSASCDALTGACLNCQENSKGNHCEECKEGFYQSPDATK-ECLRCPCSAVTSTGSCSI 362
Query: 537 IGLK-QVSCYNCGQSGHLGPECANSCEALNGKKS-NLICYKCGKEGH 581
+ + C C + G++GP C N CE NG + + IC KC GH
Sbjct: 363 KSSELEPECDQC-KDGYIGPNC-NKCE--NGYYNFDSICRKCQCHGH 405
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 638 556 0.00098 119 3 11 23 0.45 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 613 (65 KB)
Total size of DFA: 317 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.56u 0.19s 47.75t Elapsed: 00:00:03
Total cpu time: 47.58u 0.20s 47.78t Elapsed: 00:00:03
Start: Thu May 9 19:18:21 2013 End: Thu May 9 19:18:24 2013