BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006619
(638 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|222616180|gb|EEE52312.1| hypothetical protein OsJ_34326 [Oryza sativa Japonica Group]
Length = 800
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
Query: 402 NVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK 461
N+VLR LLR PRYFDP ETC NCG+E H A C M+K+ +PCF+CG F H K C
Sbjct: 197 NIVLRKLLRIPRYFDPGETLLETCFNCGEEGHVAVNCPMEKRKRPCFVCGLFGHNSKQCT 256
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCY 521
QGQDCFI K H+A DCP N S FCLRCG+SGHD+ C +Y DD+K+I+CY
Sbjct: 257 QGQDCFICKKGGHIAKDCPEKHNRNTQQSTFCLRCGESGHDMFGCANDYPRDDVKEIKCY 316
Query: 522 ICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
+C GHLCC + S I K+VSCYNC Q GH G CA + + +CYKCG+EGH
Sbjct: 317 VCNQKGHLCCADFSDICPKEVSCYNCAQPGHTGLGCAKQRREASTAATPTLCYKCGEEGH 376
Query: 582 FARRCGSNFK-DRL 594
FAR C N K DR+
Sbjct: 377 FARGCTKNTKSDRM 390
>gi|218185703|gb|EEC68130.1| hypothetical protein OsI_36043 [Oryza sativa Indica Group]
Length = 492
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 402 NVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK 461
N+VLR LLR PRYFDP ETC NCG+E H A C M+K+ +PCF+CG F H K C
Sbjct: 160 NIVLRKLLRIPRYFDPGETLLETCFNCGEEGHVAVNCPMEKRKRPCFVCGLFGHNSKQCT 219
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCY 521
QGQDCFI K H+A DCP N S FCLRCG+SGHD+ C +Y DD+K+I+CY
Sbjct: 220 QGQDCFICKKGGHIAKDCPEKHNRNTQQSTFCLRCGESGHDMFGCANDYPRDDVKEIKCY 279
Query: 522 ICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
+C GHLCC + S I K+VSCYNC Q GH G CA ++ + +CYKCG+EGH
Sbjct: 280 VCNQKGHLCCADFSDICPKEVSCYNCAQPGHTGLGCAKQRREVSTAATPTLCYKCGEEGH 339
Query: 582 FARRCGSNFK-DRL 594
FAR C N K DR+
Sbjct: 340 FARGCTKNTKSDRM 353
>gi|296084007|emb|CBI24395.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/243 (46%), Positives = 146/243 (60%), Gaps = 12/243 (4%)
Query: 402 NVVLRMLLRKPRYFDPP--GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKN 459
N+VLR LLR PRYFDPP GW + C NCG+E H A C K+ KPCF+CGS +H K
Sbjct: 103 NIVLRKLLRGPRYFDPPDSGWGA--CYNCGEEGHNAVNCASVKRKKPCFVCGSLEHNAKQ 160
Query: 460 CKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ 519
C +GQDCFI K H A DCP + + +S CL+CGDS HD+ SC +Y +DLK+IQ
Sbjct: 161 CMKGQDCFICKKGGHRAKDCPEKHRSGSQNSKICLKCGDSRHDMFSCRNDYSPEDLKEIQ 220
Query: 520 CYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL----ICYK 575
CYICKSFGHLCC+N G + SCY CGQ GH G CA LN + +++ CY+
Sbjct: 221 CYICKSFGHLCCINYVDTGPIEPSCYKCGQLGHTGLACAR----LNAETADVQTPSSCYR 276
Query: 576 CGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGSNGTPHGLGNAQGRENDDQR 635
CG++GHFAR C S+ K R S++ + R + +G P LG + R+
Sbjct: 277 CGEQGHFARECKSSTKVSKRYSEVSTQSRRFLKEDKDKLGFKSAPKDLGMGRKRKKPWYE 336
Query: 636 EKG 638
E+G
Sbjct: 337 ERG 339
>gi|224132214|ref|XP_002328213.1| predicted protein [Populus trichocarpa]
gi|222837728|gb|EEE76093.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 145/246 (58%), Gaps = 6/246 (2%)
Query: 383 VIEAKDKVEDA-RKENEAKYNVVLRMLLRKPRYFDPP--GWNSETCSNCGKENHTAATCK 439
+EA + VE +E NVVLR LLR PRYFDPP GW+ TC NCG+E H A C
Sbjct: 155 AVEAAELVESGGATADEESVNVVLRKLLRGPRYFDPPDSGWS--TCYNCGEEGHMAVNCP 212
Query: 440 M-QKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGD 498
K+ KPCF+CGS +H K C +G+DCFI K S H A +CP SS CL CG+
Sbjct: 213 TPMKKIKPCFVCGSLEHGAKQCSKGRDCFICKKSGHRAKNCPDKYNATPQSSKICLNCGE 272
Query: 499 SGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
SGH++ SC+ +Y +DLK+IQCYICKSFGHLCCV S L+QVSCY CG+ GH G EC
Sbjct: 273 SGHEMFSCKKDYSPNDLKEIQCYICKSFGHLCCVTSGDDSLRQVSCYRCGELGHSGLECG 332
Query: 559 NSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGSNG 618
E +S +CY+CG+ GHFAR C + K R +L + +G
Sbjct: 333 RLNEEATMAESPSLCYRCGEGGHFARECTRSAKGGKRSRELSTPTLKSHRENNKSMGIKS 392
Query: 619 TPHGLG 624
PH LG
Sbjct: 393 APHDLG 398
>gi|224102939|ref|XP_002312862.1| predicted protein [Populus trichocarpa]
gi|222849270|gb|EEE86817.1| predicted protein [Populus trichocarpa]
Length = 640
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/280 (43%), Positives = 158/280 (56%), Gaps = 16/280 (5%)
Query: 373 QQKKRRKKTRVIEAKDKVEDARKEN-EAKYNVVLRMLLRKPRYFDP--PGWNSETCSNCG 429
++ ++ +K V EA + VED E N+VLR LLR PRYFD GW++ C NCG
Sbjct: 143 EKAEKSEKVEVDEAAELVEDGGANAVEDSVNIVLRKLLRGPRYFDTLDSGWSN--CYNCG 200
Query: 430 KENHTAATC-KMQKQNKPCFLCGSFKHRWKNC----------KQGQDCFINKGSEHLASD 478
+E H A C K+ KPCF+CGS +H K C K GQDCFI K S H A D
Sbjct: 201 EEGHMAVNCPTFTKKIKPCFVCGSLEHGAKQCTKVCEDITIQKLGQDCFICKESGHRARD 260
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
CP +G + SS CL+CG SGH++ SC +Y DDLK+IQCYICKSFGHLCC S G
Sbjct: 261 CPEKYKGTHQSSKICLKCGGSGHEMLSCMNDYSVDDLKEIQCYICKSFGHLCCFTSGDDG 320
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISD 598
+QVSCY CG+ GH G +C E + +S CY+CG+ GHFAR C S+ + R +
Sbjct: 321 SRQVSCYRCGELGHTGLDCGRLHEEASMIESPSSCYRCGEGGHFARECTSSARGGRRNRE 380
Query: 599 LLFTAERPPTRARHFVGSNGTPHGLGNAQGRENDDQREKG 638
LL + + +G PH L A+ + EKG
Sbjct: 381 LLTLTLKAHRENKESLGIKSAPHDLVKARKKRKTKSEEKG 420
>gi|296089311|emb|CBI39083.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 226/416 (54%), Gaps = 18/416 (4%)
Query: 152 ERNGREEKRRRANRAKLDEYEKISDLSGFDNLKAMIEAEAFMRRKKRNRKRKKREIEFCG 211
++ R+ K+ + LDE++ +SDLS F NL AM+EAEAF+R+KK R++KK++IEF
Sbjct: 279 QKPKRQCKKNEEVMSSLDEFKMLSDLSNFKNLAAMMEAEAFLRKKKIKRRKKKKKIEFEA 338
Query: 212 QEDVSVSAEEEKGQLDKSQPLKVVEVSKPESVLTTEMDGSRHLFIDPAKDNEGASMGEPM 271
Q++++V + Q D + + + + SV +E LF+D K S + +
Sbjct: 339 QDEITVDVGPGQEQPDTVKAVTTAKAVEAGSVSVSENINPEKLFVDEVKAGVQPSSIKAV 398
Query: 272 PMVRVVGGNDGGNSFEVIDLCLSSTDDDKSVSGVSL--ERSVEDMGKAVQTTATITGAND 329
M + + E + + + + VS + ER ++ K + + D
Sbjct: 399 DMRK-------ASETESVSVTKNIVSEKLFVSNFKIDEERISQEAQKKCTKNEEVMSSLD 451
Query: 330 GVKSV-EMNNLYSL--RLEDDKPLSDMRLGRRVEDTVSV---GPIVGERQQKKRRKKTRV 383
K + +++N +L +E + + + +R + ++ P + +K+
Sbjct: 452 EFKMLSDLSNFKNLAAMMEAEAFMRCKKSKKRRKKKRNMEFEAPFPINVDSVREQKQVDT 511
Query: 384 IEAKDKVEDARKEN-EAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQK 442
++ D V+ + E+ + K N+VL+ LL+ PR FDPP + C N +E TA C +K
Sbjct: 512 CKSVDTVKLFQIESIDIKDNIVLQKLLQAPRCFDPPESSWRMCHNSEEEAPTAVACSAEK 571
Query: 443 QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHD 502
Q KPCFLCGSFKH +CKQ ++CF+ + S+H S CP +QGN SS CLRCG SGHD
Sbjct: 572 QKKPCFLCGSFKHSGNHCKQARNCFVYERSQHTRS-CPEKNQGNCPSSMICLRCGGSGHD 630
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
+ C EY +DDLK+IQCY+CK +GHLCCV+ I +Q SCY CG GHLG +C
Sbjct: 631 MLFCRNEYSSDDLKEIQCYVCKRYGHLCCVDFPDIP-RQASCYKCGHYGHLGSDCT 685
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 132/258 (51%), Gaps = 33/258 (12%)
Query: 15 EKEEGNGSKEKNIERGVAAKSKLDEYKEISDLTGFDNLKAMILAESIMKRKKKRNRKKKK 74
+KE G ++ ++ S LDE+K +SDL+ F NL AM+ AE+ +++KK + RKKKK
Sbjct: 273 DKERGLQKPKRQCKKNEEVMSSLDEFKMLSDLSNFKNLAAMMEAEAFLRKKKIKRRKKKK 332
Query: 75 KDKTKL-DSLYREVADLTGFE---NLKAMIEAEAPMRRKSSERMRGNLETQFC------- 123
K + + D + +V G E +KA+ A+A S N E F
Sbjct: 333 KIEFEAQDEITVDVG--PGQEQPDTVKAVTTAKAVEAGSVSVSENINPEKLFVDEVKAGV 390
Query: 124 ------------AQENDTVNVAEEQGQLGEDDGLNKVEETERNGREEKRRRANR-----A 166
A E ++V+V + + E ++ + E +E +++ + +
Sbjct: 391 QPSSIKAVDMRKASETESVSVT--KNIVSEKLFVSNFKIDEERISQEAQKKCTKNEEVMS 448
Query: 167 KLDEYEKISDLSGFDNLKAMIEAEAFMRRKKRNRKRKKRE-IEFCGQEDVSVSAEEEKGQ 225
LDE++ +SDLS F NL AM+EAEAFMR KK ++RKK+ +EF ++V + E+ Q
Sbjct: 449 SLDEFKMLSDLSNFKNLAAMMEAEAFMRCKKSKKRRKKKRNMEFEAPFPINVDSVREQKQ 508
Query: 226 LDKSQPLKVVEVSKPESV 243
+D + + V++ + ES+
Sbjct: 509 VDTCKSVDTVKLFQIESI 526
>gi|357156364|ref|XP_003577431.1| PREDICTED: uncharacterized protein LOC100831383 isoform 1
[Brachypodium distachyon]
Length = 476
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 130/221 (58%), Gaps = 2/221 (0%)
Query: 402 NVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK 461
N VLR LLR PRYFDP ETC NCG+E H A C M+K+ KPCF+CG F H K C
Sbjct: 146 NTVLRKLLRIPRYFDPGETILETCFNCGEEGHVATNCTMEKRKKPCFICGLFGHIAKQCT 205
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNL-SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
QGQDCFI K H+A DCP N S+ CLRCG+ GHD+ +C +Y DD+K+I+C
Sbjct: 206 QGQDCFICKKGGHMAKDCPDKHNINTQQSTTLCLRCGEIGHDMFACTNDYPRDDVKEIKC 265
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
Y+CK GHLCC + S K+V+CYNC Q GH G CA + + +CYKCGKEG
Sbjct: 266 YVCKQSGHLCCTDFSDNCPKEVTCYNCAQPGHTGLGCAKQRRETSVATTPTLCYKCGKEG 325
Query: 581 HFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGSNGTPH 621
HFAR C +N + R L R + + G PH
Sbjct: 326 HFARGC-TNIANSDRFKGELSAHSRKKDKWKKDSGPRSAPH 365
>gi|359479082|ref|XP_002272646.2| PREDICTED: uncharacterized protein LOC100259916 [Vitis vinifera]
Length = 481
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/247 (44%), Positives = 142/247 (57%), Gaps = 21/247 (8%)
Query: 398 EAKYNVVLRMLLRKPRYFDPP--GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKH 455
E N+VLR LLR PRYFDPP GW + C NCG+E H A C K+ KPCF+CGS +H
Sbjct: 148 EGSDNIVLRKLLRGPRYFDPPDSGWGA--CYNCGEEGHNAVNCASVKRKKPCFVCGSLEH 205
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
K C +GQDCFI K H A DCP + + +S CL+CGDS HD+ SC +Y +DL
Sbjct: 206 NAKQCMKGQDCFICKKGGHRAKDCPEKHRSGSQNSKICLKCGDSRHDMFSCRNDYSPEDL 265
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---- 571
K+IQCYICKSFGHLCC+N G + SCY CGQ GH G CA LN + +++
Sbjct: 266 KEIQCYICKSFGHLCCINYVDTGPIEPSCYKCGQLGHTGLACAR----LNAETADVQTPS 321
Query: 572 ICYKCGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGSNGTPHGLGNAQGREN 631
CY+CG++GHF + R S++ + R + +G P LG + R+
Sbjct: 322 SCYRCGEQGHFVSK---------RYSEVSTQSRRFLKEDKDKLGFKSAPKDLGMGRKRKK 372
Query: 632 DDQREKG 638
E+G
Sbjct: 373 PWYEERG 379
>gi|449532848|ref|XP_004173390.1| PREDICTED: DNA-binding protein HEXBP-like, partial [Cucumis
sativus]
Length = 425
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 131/216 (60%), Gaps = 6/216 (2%)
Query: 381 TRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRYFDPP-GWNSETCSNCGKENHTAATCK 439
T VI+ D VE N V R LLR PRYFDPP W TC NCG+E H A CK
Sbjct: 147 TGVIDQVDPVEP--NLTGTTDNNVFRKLLRGPRYFDPPDSWG--TCYNCGEEGHNAVNCK 202
Query: 440 MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDS 499
K+ +PCF+CGS +H K+C + +DCFI K S H A+ CP + + S CL+CGDS
Sbjct: 203 SAKRKRPCFVCGSLEHNAKSCSKARDCFICKKSGHRANACPEKHKNGSSSLRICLKCGDS 262
Query: 500 GHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
GHD+ SC+ Y DDLKKIQCYIC+ FGHLCCVN + VSCY CGQ+GH G C+
Sbjct: 263 GHDMFSCQNHYADDDLKKIQCYICQKFGHLCCVNFT-SDTSVVSCYKCGQTGHTGLSCSR 321
Query: 560 SCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
+G S+ CY+CG EGHFAR C S K R
Sbjct: 322 LRGEASGAVSSSQCYRCGDEGHFARECTSATKSGKR 357
>gi|449439166|ref|XP_004137358.1| PREDICTED: cold shock domain-containing protein 3-like [Cucumis
sativus]
Length = 406
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 124/191 (64%), Gaps = 4/191 (2%)
Query: 402 NVVLRMLLRKPRYFDPP-GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC 460
N V R LLR PRYFDPP W TC NCG+E H A CK K+ +PCF+CGS +H K+C
Sbjct: 166 NNVFRKLLRGPRYFDPPDSWG--TCYNCGEEGHNAVNCKSAKRKRPCFVCGSLEHNAKSC 223
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
+ +DCFI K S H A+ CP + + S CL+CGDSGHD+ SC+ Y DDLKKIQC
Sbjct: 224 SKARDCFICKKSGHRANACPEKHKNGSSSLRICLKCGDSGHDMFSCQNHYADDDLKKIQC 283
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
YIC+ FGHLCCVN + VSCY CGQ+GH G C+ +G S+ CY+CG EG
Sbjct: 284 YICQKFGHLCCVNFT-SDTSVVSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGDEG 342
Query: 581 HFARRCGSNFK 591
HFAR C S+ K
Sbjct: 343 HFARECTSSTK 353
>gi|413925352|gb|AFW65284.1| hypothetical protein ZEAMMB73_494862 [Zea mays]
Length = 515
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 399 AKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWK 458
A N+VLR LLR PRYFDP ETC NC +E H AA C ++K+ KPCF+CG F H K
Sbjct: 150 ASDNMVLRKLLRIPRYFDPGETLLETCFNCSEEGHVAANCPLEKRKKPCFVCGLFGHNAK 209
Query: 459 NCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
C QGQDCFI K H+A DCP + N+ S CL+CG+ GHD+ C +Y DD++KI
Sbjct: 210 QCTQGQDCFICKKGGHMAKDCPDKHRRNDHQSTLCLKCGEIGHDMFGCTNDYPPDDIEKI 269
Query: 519 QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGK 578
+CY+C GHLCC + S KQ+SCYNC QSGH G CA E + + +C+KCG+
Sbjct: 270 RCYVCNQKGHLCCSDFSDDCPKQISCYNCAQSGHSGLGCAKRRET-SAVTTPTLCFKCGE 328
Query: 579 EGHFARRCGSNFK 591
EGHFAR C N K
Sbjct: 329 EGHFARGCTKNAK 341
>gi|326505632|dbj|BAJ95487.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 480
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 140/238 (58%), Gaps = 6/238 (2%)
Query: 402 NVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK 461
N VLR LLR PRYFDP ETC NCG+E H A C M+K+ KPCF+CG F H K C
Sbjct: 151 NTVLRKLLRIPRYFDPGETILETCFNCGEEGHVAVNCPMEKRKKPCFVCGLFGHNAKQCT 210
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLS---SNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
QGQ+CFI K H+A DCP D+ ++ + CLRCG++GHD+ C +Y DD+K+I
Sbjct: 211 QGQECFICKKGGHMAKDCP--DKHTKITQQCTALCLRCGETGHDMFGCSNDYPLDDVKEI 268
Query: 519 QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGK 578
+CY+CK GHLCC + + K+V+CYNC QSGH G CA + + +CYKCG+
Sbjct: 269 KCYVCKQNGHLCCTDFADSCSKEVTCYNCAQSGHTGLGCAKQRRETSVATTPTLCYKCGE 328
Query: 579 EGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGSNGTPHGLGNAQGRENDDQRE 636
+GHFAR C +N R L + R R ++ G PHG + DD+ E
Sbjct: 329 DGHFARGC-TNSAKPGRFKGELSSHSRRKDRWKNDSGPRSAPHGSHKRKSPLFDDRWE 385
>gi|326516278|dbj|BAJ92294.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 480
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 139/238 (58%), Gaps = 6/238 (2%)
Query: 402 NVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK 461
N VLR LLR P YFDP ETC NCG+E H A C M+K+ KPCF+CG F H K C
Sbjct: 151 NTVLRKLLRIPGYFDPGETILETCFNCGEEGHVAVNCPMEKRKKPCFVCGLFGHNAKQCT 210
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLS---SNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
QGQ+CFI K H+A DCP D+ ++ + CLRCG++GHD+ C +Y DD+K+I
Sbjct: 211 QGQECFICKKGGHMAKDCP--DKHTKITRQCTALCLRCGETGHDMFGCSNDYPLDDVKEI 268
Query: 519 QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGK 578
+CY+CK GHLCC + + K+V+CYNC QSGH G CA + + +CYKCG+
Sbjct: 269 KCYVCKQNGHLCCTDFADSCSKEVTCYNCAQSGHTGLGCAKQRRETSVATTPTLCYKCGE 328
Query: 579 EGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGSNGTPHGLGNAQGRENDDQRE 636
+GHFAR C +N R L + R R ++ G PHG + DD+ E
Sbjct: 329 DGHFARGC-TNSAKPGRFKGELSSHSRRKDRWKNDSGPRSAPHGSHKRKSPLFDDRWE 385
>gi|356547869|ref|XP_003542327.1| PREDICTED: uncharacterized protein LOC100780476 [Glycine max]
Length = 529
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 117/189 (61%)
Query: 402 NVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK 461
N+VLR LLR PRYFDPP + C NCG+E H A C K+ KPC++CG H + C
Sbjct: 140 NMVLRKLLRGPRYFDPPDNSWGACFNCGEEGHAAVNCSAVKRKKPCYVCGCLGHNARQCS 199
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCY 521
+ QDCFI K H A DCP + S CL+CG+SGHD+ SC +Y DDLK+IQCY
Sbjct: 200 KVQDCFICKKGGHRAKDCPEKHTSTSKSIAICLKCGNSGHDIFSCRNDYSQDDLKEIQCY 259
Query: 522 ICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
+CK GHLCCVN+ ++SCY CGQ GH+G C + + + C+KCG+EGH
Sbjct: 260 VCKRLGHLCCVNTDDATAGEISCYKCGQLGHMGLACLRLQDEIASGATPSSCFKCGEEGH 319
Query: 582 FARRCGSNF 590
FAR C S+
Sbjct: 320 FARECTSSI 328
>gi|356574813|ref|XP_003555539.1| PREDICTED: uncharacterized protein LOC100794448 [Glycine max]
Length = 533
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/315 (38%), Positives = 165/315 (52%), Gaps = 33/315 (10%)
Query: 295 STDDDKSVSGVSLERSVEDMGKAVQTTATITGANDGVKSVEMNNLYSLRLEDDKPLSDMR 354
S+DDD++ +SL + VE KA++ A ND V S +S + E PL+D+
Sbjct: 32 SSDDDEANQDLSL-KIVE---KAMRMRAAKHAPNDDVSSP-----FSQKSELAVPLNDV- 81
Query: 355 LGRRVEDTVSVGPIVGERQQKKRRKKTR--------VIEAKDKVEDARKENEAK------ 400
V D S ++KK K R VI + ++E+ E
Sbjct: 82 ----VSDLPSAIADSEVTEKKKTAKLKREAAGDQSVVIAEEQEMEETSNATENHEFVEGS 137
Query: 401 -----YNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKH 455
+N+VLR LLR PRYFDPP + C NCG++ H A C K+ KPC++CG H
Sbjct: 138 PVLIGHNMVLRKLLRGPRYFDPPDSSWGACFNCGEDGHAAVNCSAAKRKKPCYVCGGLGH 197
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
+ C + QDCFI K H A DC + S CL+CG+SGHD+ SC +Y DDL
Sbjct: 198 NARQCTKAQDCFICKKGGHRAKDCLEKHTSRSKSVAICLKCGNSGHDMFSCRNDYSPDDL 257
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
K+IQCY+CK GHLCCVN+ ++SCY CGQ GH G C+ + + + C+K
Sbjct: 258 KEIQCYVCKRVGHLCCVNTDDATPGEISCYKCGQLGHTGLACSRLRDEITSGATPSSCFK 317
Query: 576 CGKEGHFARRCGSNF 590
CG+EGHFAR C S+
Sbjct: 318 CGEEGHFARECTSSI 332
>gi|357493439|ref|XP_003617008.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355518343|gb|AES99966.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 638
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 122/200 (61%), Gaps = 8/200 (4%)
Query: 402 NVVLRMLLRKPRYFDPPG---WNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHR-W 457
N VLR LLR PRYFDPP W TC NCG+E H + C K+ KPCF+CGS H
Sbjct: 259 NTVLRKLLRGPRYFDPPSDNVWG--TCYNCGEEGHASFNCTAAKRKKPCFVCGSLSHNNG 316
Query: 458 KNCKQGQDCFINKGSEHLASDCPGTDQG--NNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
K C G+ C K + H +SDCP G N+ S CLRCG+SGHD+ C+ +Y DDL
Sbjct: 317 KKCIMGRYCSTCKLAGHRSSDCPKKHTGGSNSKSLTVCLRCGNSGHDMFLCKNDYSQDDL 376
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
K+IQCY+CK FGHLCCVN++ K+ SCY CGQ GH+G C+ + CYK
Sbjct: 377 KEIQCYVCKKFGHLCCVNTTEAIPKEFSCYKCGQMGHIGWACSRLKNEATAATTPSSCYK 436
Query: 576 CGKEGHFARRCGSNFKDRLR 595
CG++GHFAR C S+ K R
Sbjct: 437 CGEQGHFARECSSSVKASSR 456
>gi|255634708|gb|ACU17716.1| unknown [Glycine max]
Length = 389
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 116/188 (61%)
Query: 403 VVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ 462
+VLR LLR PRYFDPP + C NCG+E H A C K+ KPC++CG H + C +
Sbjct: 1 MVLRKLLRGPRYFDPPDNSWGACFNCGEEGHAAVNCSAVKRKKPCYVCGCLGHNARQCSK 60
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
QDCFI K H A DCP + S CL+CG+SGHD+ SC +Y DDLK+IQCY+
Sbjct: 61 VQDCFICKKDGHRAKDCPEKHTSTSKSIAICLKCGNSGHDIFSCRNDYSQDDLKEIQCYV 120
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
CK GHLCCVN+ ++SCY CGQ GH+G C + + + C+KCG+EGHF
Sbjct: 121 CKRLGHLCCVNTDDATAGEISCYKCGQLGHMGLACLRLQDEIASGATPSSCFKCGEEGHF 180
Query: 583 ARRCGSNF 590
AR C S+
Sbjct: 181 ARECTSSI 188
>gi|255573261|ref|XP_002527559.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223533051|gb|EEF34811.1| cellular nucleic acid binding protein, putative [Ricinus communis]
Length = 497
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 118/191 (61%), Gaps = 5/191 (2%)
Query: 398 EAKYNVVLRMLLRKPRYFDPP--GWNSETCSNCGKENHTAATC-KMQKQNKPCFLCGSFK 454
E N+VLR LLR PRYFD P GW+ TC NCGKE H A C +K+ KPCFLCG
Sbjct: 157 EVAQNMVLRKLLRGPRYFDSPDSGWS--TCFNCGKEGHMAVNCPSFEKKRKPCFLCGGLD 214
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADD 514
H K C + + C I K H + CP +G SS CL+CGDSGHD+ SC Y DD
Sbjct: 215 HGVKQCSKERLCIICKSVGHRPNRCPEKHKGGPQSSKVCLKCGDSGHDMFSCRNSYPLDD 274
Query: 515 LKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICY 574
LK+IQCYICK+ GHLCCVN ++VSCY CG+ GH G EC++ + + C+
Sbjct: 275 LKEIQCYICKNGGHLCCVNFVDNSPREVSCYKCGELGHTGSECSSLHDEATTTAPSSSCF 334
Query: 575 KCGKEGHFARR 585
+CG+EGHFA R
Sbjct: 335 RCGEEGHFAGR 345
>gi|297815456|ref|XP_002875611.1| hypothetical protein ARALYDRAFT_323091 [Arabidopsis lyrata subsp.
lyrata]
gi|297321449|gb|EFH51870.1| hypothetical protein ARALYDRAFT_323091 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 120/209 (57%), Gaps = 17/209 (8%)
Query: 392 DARKENEAKYNVVLRMLLRKPRYFDPP--GWNSETCSNCGKENHTAATCKMQ-KQNKPCF 448
D K E N+VL+ LLR RYFDPP GW S C +CG++ HT+ C K+ KPCF
Sbjct: 135 DEPKTEETSSNLVLKKLLRGARYFDPPDAGWVS--CYSCGEQGHTSFNCPTPTKRRKPCF 192
Query: 449 LCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG 508
+CGS +H K C +G DC+I K H A DCP + N CLRCGD GHD+ C+
Sbjct: 193 ICGSLEHGAKQCSKGHDCYICKKGGHRAKDCPDKYK-NGSKGAVCLRCGDFGHDMILCKY 251
Query: 509 EYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKK 568
EY +DLK IQCY+CKSFGHLCCV VSCY CGQ GH G C E N
Sbjct: 252 EYSQEDLKDIQCYVCKSFGHLCCVEPGNSPSWAVSCYRCGQLGHTGLACGRHYEERNEND 311
Query: 569 SNLI-----------CYKCGKEGHFARRC 586
S+ + CY+CG+EGHFAR C
Sbjct: 312 SSSLSFPENNREASECYRCGEEGHFAREC 340
>gi|15229721|ref|NP_189945.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
gi|9967508|emb|CAC05633.1| putative protein [Arabidopsis thaliana]
gi|20466716|gb|AAM20675.1| putative protein [Arabidopsis thaliana]
gi|25084296|gb|AAN72214.1| putative protein [Arabidopsis thaliana]
gi|332644290|gb|AEE77811.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
Length = 551
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 123/215 (57%), Gaps = 19/215 (8%)
Query: 388 DKVE--DARKENEAKYNVVLRMLLRKPRYFDPP--GWNSETCSNCGKENHTAATCKMQ-K 442
D+VE D K E N+VL+ LLR RYFDPP GW S C +CG++ HT+ C K
Sbjct: 129 DEVERSDEPKTEETASNLVLKKLLRGARYFDPPDAGWVS--CYSCGEQGHTSFNCPTPTK 186
Query: 443 QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHD 502
+ KPCF+CGS +H K C +G DC+I K + H A DCP + N CLRCGD GHD
Sbjct: 187 RRKPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCPDKYK-NGSKGAVCLRCGDFGHD 245
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCE 562
+ C+ EY +DLK +QCYICKSFGHLCCV VSCY CGQ GH G C E
Sbjct: 246 MILCKYEYSKEDLKDVQCYICKSFGHLCCVEPGNSLSWAVSCYRCGQLGHSGLACGRHYE 305
Query: 563 ALNGKKSNLI-----------CYKCGKEGHFARRC 586
N S CY+CG+EGHFAR C
Sbjct: 306 ESNENDSATPERLFNSREASECYRCGEEGHFAREC 340
>gi|357156367|ref|XP_003577432.1| PREDICTED: uncharacterized protein LOC100831383 isoform 2
[Brachypodium distachyon]
Length = 464
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 122/221 (55%), Gaps = 16/221 (7%)
Query: 402 NVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK 461
N VLR LLR PRYFDP ETC NCG+E H A C M+K+ KPCF+CG F H K C
Sbjct: 148 NTVLRKLLRIPRYFDPGETILETCFNCGEEGHVATNCTMEKRKKPCFICGLFGHIAKQCT 207
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNN-LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
QGQDCFI K H+A DCP N S+ CLRCG+ GHD+ +C +Y DD+K+I+C
Sbjct: 208 QGQDCFICKKGGHMAKDCPDKHNINTQQSTTLCLRCGEIGHDMFACTNDYPRDDVKEIKC 267
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
Y+CK GHLCC + S NC + G CA + + +CYKCGKEG
Sbjct: 268 YVCKQSGHLCCTDFSD---------NCPKEG-----CAKQRRETSVATTPTLCYKCGKEG 313
Query: 581 HFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGSNGTPH 621
HFAR C +N + R L R + + G PH
Sbjct: 314 HFARGC-TNIANSDRFKGELSAHSRKKDKWKKDSGPRSAPH 353
>gi|226495087|ref|NP_001142114.1| hypothetical protein [Zea mays]
gi|194707178|gb|ACF87673.1| unknown [Zea mays]
gi|414591597|tpg|DAA42168.1| TPA: hypothetical protein ZEAMMB73_148737 [Zea mays]
Length = 482
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 111/191 (58%), Gaps = 14/191 (7%)
Query: 401 YNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC 460
+++ LR LLR PRYFDP ETC NC +E H AA C M K+ KPCF+CG F H K C
Sbjct: 153 HSMFLRKLLRIPRYFDPGETLLETCFNCSEEGHVAANCPMGKRKKPCFVCGLFGHNAKQC 212
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
KQGQDCFI K H+A DCP + N+ S C+RCG++GHD+ C +Y DD+++I+C
Sbjct: 213 KQGQDCFICKKGGHMAKDCPDKHKRNDHQSTLCIRCGETGHDMFGCANDYPPDDIEQIRC 272
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
Y C GHLCC + L+Q CA + + +C+KCG+EG
Sbjct: 273 YACNQKGHLCCSDFFDNSLEQG--------------CAKQRREASAVTTPTLCFKCGEEG 318
Query: 581 HFARRCGSNFK 591
HFAR C N K
Sbjct: 319 HFARGCTKNAK 329
>gi|224138186|ref|XP_002322751.1| predicted protein [Populus trichocarpa]
gi|222867381|gb|EEF04512.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 142/279 (50%), Gaps = 35/279 (12%)
Query: 314 MGKAVQTTATITGANDGVK-SVEMNNLYSLRLEDDKPLSDMRLGRRVEDTVSVGPIVGER 372
M + Q AT G N + V +++L ++ R V +TV +
Sbjct: 1 MVEMTQALATTNGVNSSIAIGVSLSSLEG----------NISFCRGVAETVPAETFIVNA 50
Query: 373 QQKKRRKKTRVIEAKDKVEDARKENEAKY--NVVLRMLLRKPRYFDPPGWNS-ETCSNCG 429
++KR+ E ++ + + ++ N+VLR LLR+ RYFD P +NS E CSNCG
Sbjct: 51 MKQKRKVDRASKEMQEDTAKGMEREQVEFTDNIVLRQLLRRTRYFDGPSYNSWEMCSNCG 110
Query: 430 KENHTAATCKMQKQNKP--CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNN 487
+E H CKM+K+ K CFLC S H + C++ + C + KG H A CP DQ +
Sbjct: 111 QEGHMVCQCKMRKRKKKKLCFLCESLDHIGRRCRKNRYCSVCKGRGHKARYCPERDQERS 170
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNC 547
S CL+CG+SGHD+ SC +Y DLK+IQCY+C+SFGHLCC + ++
Sbjct: 171 -SHGICLQCGNSGHDMFSCTADYLPSDLKEIQCYVCRSFGHLCCADFPDTDPRE------ 223
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
SC A K+ CYKCG+E HFAR C
Sbjct: 224 ------------SCGATGSTKAYTTCYKCGEEDHFARNC 250
>gi|147828626|emb|CAN73043.1| hypothetical protein VITISV_005152 [Vitis vinifera]
Length = 513
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 110/243 (45%), Gaps = 66/243 (27%)
Query: 402 NVVLRMLLRKPRYFDPP--GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKN 459
N+VLR LLR PRYFDPP GW + C NCG+E H A C K+ KP
Sbjct: 229 NIVLRKLLRGPRYFDPPDSGWGA--CYNCGEEGHNAVNCASVKRKKP------------- 273
Query: 460 CKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ 519
CF+ CG H+ C +K+IQ
Sbjct: 274 ------CFV---------------------------CGSLEHNAKQC--------MKEIQ 292
Query: 520 CYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL----ICYK 575
CYICKSFGHLCC+N G + SCY CGQ GH G CA LN + +++ CY+
Sbjct: 293 CYICKSFGHLCCINYVDTGPIEPSCYKCGQLGHTGLACAR----LNAETADVQTPSSCYR 348
Query: 576 CGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGSNGTPHGLGNAQGRENDDQR 635
CG++GHFAR C S+ K R S++ + R + +G P LG R+
Sbjct: 349 CGEQGHFARECKSSTKXSKRYSEVSTQSRRFLKEDKDKLGFKSAPKDLGMGXKRKKPWYE 408
Query: 636 EKG 638
E+G
Sbjct: 409 ERG 411
>gi|242068929|ref|XP_002449741.1| hypothetical protein SORBIDRAFT_05g022420 [Sorghum bicolor]
gi|241935584|gb|EES08729.1| hypothetical protein SORBIDRAFT_05g022420 [Sorghum bicolor]
Length = 261
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 74/117 (63%)
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNS 534
+A DCP + N+ S CLRCG++GHD+ C +Y DD+++I+CY+C GHLCC +
Sbjct: 1 MAKDCPDKHKRNDHQSTLCLRCGETGHDMFGCTNDYPQDDIEQIRCYVCNQKGHLCCSDF 60
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK 591
S KQ+SCYNC QSGH G CA + S +CYKCG+EGHFAR C N K
Sbjct: 61 SDNCPKQISCYNCAQSGHSGLGCAKQRRETSAATSPTLCYKCGEEGHFARGCTKNAK 117
>gi|308807348|ref|XP_003080985.1| E3 ubiquitin ligase interacting with arginine methyltransferase
(ISS) [Ostreococcus tauri]
gi|116059446|emb|CAL55153.1| E3 ubiquitin ligase interacting with arginine methyltransferase
(ISS) [Ostreococcus tauri]
Length = 276
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 402 NVVLRMLLRKPRYFDPPGWNSET----CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRW 457
N +R +LR+PRYFD + E C CG+ H A C++ + KPC LCG H
Sbjct: 34 NEEVRNILRQPRYFDD---DYEAAALRCFRCGQGGHREAECELPAKKKPCHLCGYKSHVA 90
Query: 458 KNCKQGQDCFINKGSEHLASDCPGT-DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLK 516
++C G C+ H + DCP G + + CLRCG SGH ++ C + A+DL
Sbjct: 91 RDCPHGL-CYNCLTPGHQSRDCPYVRGSGRDAQALCCLRCGKSGHVVADCVYRFDANDLA 149
Query: 517 KIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKS-NLICYK 575
+I CY+C S GHLCC + +C CG +GHL CA++ G + C+
Sbjct: 150 QIHCYVCGSIGHLCCAPQDALPPGVPTCCRCGGNGHLDLACAHARRGFGGGSAPEFSCFH 209
Query: 576 CGKEGHFARRC 586
CG+ GH AR C
Sbjct: 210 CGERGHIAREC 220
>gi|145350100|ref|XP_001419461.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579692|gb|ABO97754.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 170
Score = 119 bits (297), Expect = 6e-24, Method: Composition-based stats.
Identities = 63/166 (37%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP-GTD 483
C CG+ H A C++ + K C LCG H ++C G CF H + DCP
Sbjct: 6 CFRCGQGGHREAECELPAKKKACHLCGYKSHIARDCPHGL-CFNCLTPGHQSRDCPYARG 64
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS 543
G + CLRCG SGH ++ C + A DL +I CY+C S GHLCC + S
Sbjct: 65 SGRDAQERCCLRCGKSGHVVADCVYRFDASDLAQIHCYVCGSKGHLCCAPQDSLPPGLPS 124
Query: 544 CYNCGQSGHLGPECANSCEALNGKKS-NLICYKCGKEGHFARRCGS 588
C CG GHL CA+S G + + C+ CG+ GH AR C S
Sbjct: 125 CCRCGGDGHLDTACAHSRRGFGGGAAPDFACFHCGQRGHIARECPS 170
Score = 40.0 bits (92), Expect = 4.3, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 12/98 (12%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C RCG GH + CE KK C++C H+ GL C+NC GH
Sbjct: 6 CFRCGQGGHREAECELP-----AKKKACHLCGYKSHI--ARDCPHGL----CFNCLTPGH 54
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNF 590
+C + C +CGK GH C F
Sbjct: 55 QSRDCPYA-RGSGRDAQERCCLRCGKSGHVVADCVYRF 91
>gi|412994131|emb|CCO14642.1| predicted protein [Bathycoccus prasinos]
Length = 421
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 402 NVVLRMLLRKPRYFDPPGWNSET-CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC 460
N +R +LR PRYFD + C CGK H C + + KPC LCG F H+ ++C
Sbjct: 136 NTTVREILRLPRYFDDDFEAAAMRCFRCGKGGHREFECTLPAKQKPCHLCGDFDHQARDC 195
Query: 461 KQGQDCFINKGSEHLASDCP-----GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
+G CF H + DC G DQ S CLRCG SGH + C + DL
Sbjct: 196 PKGL-CFNCLTPGHRSRDCEERRGIGRDQ----QSLCCLRCGRSGHVVEKCMFTFSEADL 250
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
K++ CY+C FGHLCC ++SC CG GH+ C +S + C+
Sbjct: 251 KRMPCYVCGEFGHLCCAPQDSQPPGKLSCVKCGGEGHVESTCRHS--NFRRSQGGFECFN 308
Query: 576 CGKEGHFARRC 586
CG H AR C
Sbjct: 309 CGGP-HLAREC 318
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 12/100 (12%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C RCG GH C K+ C++C F H GL C+NC GH
Sbjct: 160 CFRCGKGGHREFEC-----TLPAKQKPCHLCGDFDHQ--ARDCPKGL----CFNCLTPGH 208
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
+C + + +L C +CG+ GH +C F +
Sbjct: 209 RSRDCEER-RGIGRDQQSLCCLRCGRSGHVVEKCMFTFSE 247
>gi|255581588|ref|XP_002531599.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223528795|gb|EEF30802.1| cellular nucleic acid binding protein, putative [Ricinus communis]
Length = 167
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS 543
Q N + CLRCG GH++ SC +Y DDLK+IQCY+CK FGHLCC + + ++S
Sbjct: 16 QENKSHPDACLRCGGPGHEMFSCRTDYLPDDLKEIQCYVCKKFGHLCCHDFPDLYPTELS 75
Query: 544 CYNCGQSGHLGP-----ECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
CYNCGQSGHLG EC N C A ++ L+C G++G A C ++ K+
Sbjct: 76 CYNCGQSGHLGSRLFCKECPNLCGATMIQEKPLLCATDGEQGPLAPTCSNHVKN 129
>gi|164605537|dbj|BAF98603.1| CM0545.270.nc [Lotus japonicus]
Length = 259
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 91/229 (39%), Gaps = 77/229 (33%)
Query: 402 NVVLRMLLRKPRYFDPP---GWNSETCSNCGKENHTAATCKMQKQ-NKPCFLCGSFKHRW 457
NVVLR LLR PRY+DPP GW ETC NCG+E H C K+ KPC+L
Sbjct: 41 NVVLRKLLRGPRYYDPPADCGW--ETCYNCGEEGHATVKCAAAKELKKPCYL-------- 90
Query: 458 KNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKK 517
CG H C+ K+
Sbjct: 91 --------------------------------------CGSLMHQAKRCK--------KE 104
Query: 518 IQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
IQCY+CKSFGHLCC N++ ++SCY CGQ+GH G C + GK
Sbjct: 105 IQCYVCKSFGHLCCANTTGSTPIEISCYKCGQTGHTG---LARCSHVQGKN--------- 152
Query: 578 KEGHFARRCGSNFKDRLRISDLLFTAERPPTRARH--FVGSNGTPHGLG 624
F G K+ +R + PT + ++G PH +G
Sbjct: 153 ---FFTENAGVMVKEEVRKRGHTLSNTESPTFQKENGYMGDRSAPHDMG 198
>gi|413925351|gb|AFW65283.1| hypothetical protein ZEAMMB73_494862 [Zea mays]
Length = 270
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 68/117 (58%), Gaps = 10/117 (8%)
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNS 534
+A DCP + N+ S CL+CG+ GHD+ C +Y DD++K GHLCC +
Sbjct: 1 MAKDCPDKHRRNDHQSTLCLKCGEIGHDMFGCTNDYPPDDIEK---------GHLCCSDF 51
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK 591
S KQ+SCYNC QSGH G CA E + + +C+KCG+EGHFAR C N K
Sbjct: 52 SDDCPKQISCYNCAQSGHSGLGCAKRRET-SAVTTPTLCFKCGEEGHFARGCTKNAK 107
>gi|108864537|gb|ABA94400.2| Zinc knuckle family protein, expressed [Oryza sativa Japonica
Group]
Length = 232
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C +Y DD+K+I+CY+C GHLCC + S I K+VSCYNC Q GH G CA +
Sbjct: 4 CANDYPRDDVKEIKCYVCNQKGHLCCADFSDICPKEVSCYNCAQPGHTGLGCAKQRREAS 63
Query: 566 GKKSNLICYKCGKEGHFARRCGSNFK-DRL 594
+ +CYKCG+EGHFAR C N K DR+
Sbjct: 64 TAATPTLCYKCGEEGHFARGCTKNTKSDRM 93
>gi|15239349|ref|NP_198473.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
gi|9759037|dbj|BAB09364.1| unnamed protein product [Arabidopsis thaliana]
gi|332006678|gb|AED94061.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
Length = 254
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCY 545
N+ + CLRCG GHD++ C+ EY +DLK I+CY+C S GHLCC+ VSCY
Sbjct: 21 NDDEAEVCLRCGGFGHDMTLCKYEYSHEDLKNIKCYVCNSLGHLCCIEPGHTQSWTVSCY 80
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNF 590
CGQ GH G C + C+ CG+EGHF +C ++F
Sbjct: 81 RCGQLGHTGLACGRH----YDDSVSPSCFICGREGHFEHQCHNSF 121
>gi|303278606|ref|XP_003058596.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459756|gb|EEH57051.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 291
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSS 505
C LCG H ++C++G CF S H + DCP G + CLRCG GH +
Sbjct: 1 CHLCGYLDHLARDCRRGL-CFNCLKSGHQSRDCPEPRGVGRETQALCCLRCGGRGHAATD 59
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVN----------SSIIGLKQVSCYNCGQSGHLGP 555
C + A D+ ++ CY+C FGHLCC + + G K+ SC CG GH+
Sbjct: 60 CARSFAASDVARVACYVCGEFGHLCCASQDEAAGALASAGGGGGKRKSCCRCGGMGHVDA 119
Query: 556 ECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+CA A L C++CGK GH AR C S
Sbjct: 120 DCAQRDAARF--LGELACFRCGKRGHIARECPS 150
>gi|414591599|tpg|DAA42170.1| TPA: hypothetical protein ZEAMMB73_148737 [Zea mays]
Length = 256
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 14/117 (11%)
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNS 534
+A DCP + N+ S C+RCG++GHD+ C +Y DD+++I+CY C GHLCC +
Sbjct: 1 MAKDCPDKHKRNDHQSTLCIRCGETGHDMFGCANDYPPDDIEQIRCYACNQKGHLCCSDF 60
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK 591
L+Q CA + + +C+KCG+EGHFAR C N K
Sbjct: 61 FDNSLEQG--------------CAKQRREASAVTTPTLCFKCGEEGHFARGCTKNAK 103
>gi|297805180|ref|XP_002870474.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316310|gb|EFH46733.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 15/101 (14%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCY 545
N+ ++ CLRCG+ GHD++ C+ EY +DLK I+CY+CKS GHLCC+ S VSCY
Sbjct: 5 NDEAAEVCLRCGEFGHDMTLCKYEYSQEDLKDIKCYVCKSLGHLCCIEPSHSPSWTVSCY 64
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CGQ GH G C+ C EGHF +C
Sbjct: 65 RCGQLGHTG---------------LASCFICEGEGHFEHQC 90
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 79/199 (39%), Gaps = 55/199 (27%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPG 481
+E C CG+ H CK + + K+ K C++ K HL P
Sbjct: 9 AEVCLRCGEFGHDMTLCKYEYSQE----------DLKDIK----CYVCKSLGHLCCIEPS 54
Query: 482 TDQGNNLSSNFCLRCGDSGHD-LSSCEGEYHADDLKKIQCYICKSFGHL--CCVNSSIIG 538
+S C RCG GH L+S C+IC+ GH C NSS +
Sbjct: 55 HSPSWTVS---CYRCGQLGHTGLAS--------------CFICEGEGHFEHQCPNSSSVC 97
Query: 539 LKQVS----CYN---------CGQ-----SGHLGPECANS---CEALNGKKSNLICYKCG 577
+ S C+ C Q G+L EC NS L G+K+ +CY+C
Sbjct: 98 FPENSSEEGCFEHQGPNSSSVCFQEIRREEGYLSSECPNSSGISSTLQGRKTRRLCYECK 157
Query: 578 KEGHFARRCGSNFKDRLRI 596
+GH AR C ++ +D+ I
Sbjct: 158 GKGHIARDCPNSSQDKYGI 176
>gi|164656387|ref|XP_001729321.1| hypothetical protein MGL_3356 [Malassezia globosa CBS 7966]
gi|159103212|gb|EDP42107.1| hypothetical protein MGL_3356 [Malassezia globosa CBS 7966]
Length = 171
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 72/170 (42%), Gaps = 16/170 (9%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG---QDCFINKGSEHLASDCP 480
+C NCG+ HT A C N C+ CG H +C + CF + H++ +CP
Sbjct: 6 SCYNCGRPGHTIAACP-SAGNPTCYNCGQQGHVSVDCTNQPVPKTCFRCNEAGHVSRECP 64
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ-CYICKSFGHL---CCVNSSI 536
+ + ++ C RCG++GH C + + + CY C GHL C
Sbjct: 65 HAEARGDAAAGECYRCGETGHIARMCPVSGGSGAPRNPRACYNCGGVGHLSRDCSSAPGA 124
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ CYNCG GHL EC + S CY CG H A +C
Sbjct: 125 AATASMKCYNCGNMGHLSRECP--------RPSQRSCYTCGSSDHLAAQC 166
>gi|242068927|ref|XP_002449740.1| hypothetical protein SORBIDRAFT_05g022410 [Sorghum bicolor]
gi|241935583|gb|EES08728.1| hypothetical protein SORBIDRAFT_05g022410 [Sorghum bicolor]
Length = 228
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 42/64 (65%)
Query: 399 AKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWK 458
A N+VLR LLR PRYFDP +TC NC +E H AA C M+K+ KPCF+CG F H K
Sbjct: 159 ASDNMVLRKLLRIPRYFDPGETLLDTCFNCSEEGHVAANCPMEKRKKPCFVCGLFGHNAK 218
Query: 459 NCKQ 462
C Q
Sbjct: 219 QCTQ 222
>gi|115485975|ref|NP_001068131.1| Os11g0573200 [Oryza sativa Japonica Group]
gi|113645353|dbj|BAF28494.1| Os11g0573200, partial [Oryza sativa Japonica Group]
Length = 129
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 41/61 (67%)
Query: 402 NVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK 461
N+VLR LLR PRYFDP ETC NCG+E H A C M+K+ +PCF+CG F H K C
Sbjct: 37 NIVLRKLLRIPRYFDPGETLLETCFNCGEEGHVAVNCPMEKRKRPCFVCGLFGHNSKQCT 96
Query: 462 Q 462
Q
Sbjct: 97 Q 97
>gi|340057209|emb|CCC51551.1| putative universal minicircle sequence binding protein (UMSBP)
[Trypanosoma vivax Y486]
Length = 198
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 71/181 (39%), Gaps = 18/181 (9%)
Query: 422 SETCSNCGKENHTAATCKM----QKQNKPCFLCGSFKHRWKNCKQ--------GQDCFIN 469
+ +C CG+ H A C ++ C+ CG H + C + CF
Sbjct: 17 ASSCYRCGEAGHFARECTNVPPGAMGDRACYNCGQPGHLSRECPTMPHGAVGGARACFTC 76
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
HL+ DCPG +G C CG GH C G CY C GH+
Sbjct: 77 GQFGHLSRDCPGM-RGAGFGGRACYNCGQPGHISRDCPGMRGGSSFGGRSCYNCGKVGHI 135
Query: 530 ---CCVNSSIIGLKQV-SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
C G Q SCY+C Q GH+ +C N+ A + CY CG+ GH +R
Sbjct: 136 SRDCPTARGAYGGPQTRSCYHCQQEGHIARDCPNA-PADGAVRGGGACYNCGQPGHISRA 194
Query: 586 C 586
C
Sbjct: 195 C 195
>gi|168009954|ref|XP_001757670.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691364|gb|EDQ77727.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 65/164 (39%), Gaps = 58/164 (35%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
ETC NCG++ H AA C Q + KP C++ H + DCP
Sbjct: 1 ETCYNCGQQGHWAAECTKQAREKP-------------------CYVCGNFGHFSYDCP-- 39
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
+ ++CYICK GH+CC++ S V
Sbjct: 40 ---------------------------------EALRCYICKRTGHMCCIDVSDASPTPV 66
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
SCY CG GH G + + ++ CY+CG EGHFAR C
Sbjct: 67 SCYRCGDLGHSGVVSISQ----DSYENQTACYRCGNEGHFAREC 106
>gi|414591598|tpg|DAA42169.1| TPA: hypothetical protein ZEAMMB73_148737 [Zea mays]
Length = 226
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%)
Query: 401 YNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC 460
+++ LR LLR PRYFDP ETC NC +E H AA C M K+ KPCF+CG F H K C
Sbjct: 153 HSMFLRKLLRIPRYFDPGETLLETCFNCSEEGHVAANCPMGKRKKPCFVCGLFGHNAKQC 212
Query: 461 KQ 462
KQ
Sbjct: 213 KQ 214
>gi|161752|gb|AAC37171.1| cnjB [Tetrahymena thermophila]
gi|737494|prf||1922371A cnjB gene
Length = 1748
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 425 CSNCGKENHTAATC-----KMQKQNKPCFLCGSFKHRWKNCKQGQD----CFINKGSEHL 475
C CGK H A C + +KQ+ CF C H K+C Q CF H
Sbjct: 1451 CFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFKCGEEGHF 1510
Query: 476 ASDCPGTDQGNNLSS--NFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
+ DCP + C +CG+ GH C +K C+ CK GH+ C
Sbjct: 1511 SKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQKQQ--QKNTCFKCKQEGHISKDC 1568
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK 591
NS G + C+NC Q GH+ +C N + G C+ CG+EGH +R C K
Sbjct: 1569 PNSQNSGGNK--CFNCNQEGHMSKDCPNPSQKKKG------CFNCGEEGHQSRECTKERK 1620
Query: 592 DR 593
+R
Sbjct: 1621 ER 1622
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
G+ CF H+A DC Q S C +C GH C + KK C+
Sbjct: 1448 GKGCFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQ----KKSGCFK 1503
Query: 523 CKSFGHLC--CVNSSIIGLKQV---SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
C GH C N ++ +C+ CG+ GH+ +C N ++ C+KC
Sbjct: 1504 CGEEGHFSKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNP----QKQQQKNTCFKCK 1559
Query: 578 KEGHFARRC 586
+EGH ++ C
Sbjct: 1560 QEGHISKDC 1568
>gi|146182859|ref|XP_001025435.2| Zinc knuckle family protein [Tetrahymena thermophila]
gi|146143687|gb|EAS05190.2| Zinc knuckle family protein [Tetrahymena thermophila SB210]
Length = 1748
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 425 CSNCGKENHTAATC-----KMQKQNKPCFLCGSFKHRWKNCKQGQD----CFINKGSEHL 475
C CGK H A C + +KQ+ CF C H K+C Q CF H
Sbjct: 1451 CFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFKCGEEGHF 1510
Query: 476 ASDCPGTDQGNNLSS--NFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
+ DCP + C +CG+ GH C +K C+ CK GH+ C
Sbjct: 1511 SKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQKQQ--QKNTCFKCKQEGHISKDC 1568
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK 591
NS G + C+NC Q GH+ +C N + G C+ CG+EGH +R C K
Sbjct: 1569 PNSQNSGGNK--CFNCNQEGHMSKDCPNPSQKKKG------CFNCGEEGHQSRECTKERK 1620
Query: 592 DR 593
+R
Sbjct: 1621 ER 1622
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
G+ CF H+A DC Q S C +C GH C + KK C+
Sbjct: 1448 GKGCFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQ----KKSGCFK 1503
Query: 523 CKSFGHLC--CVNSSIIGLKQV---SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
C GH C N ++ +C+ CG+ GH+ +C N ++ C+KC
Sbjct: 1504 CGEEGHFSKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNP----QKQQQKNTCFKCK 1559
Query: 578 KEGHFARRC 586
+EGH ++ C
Sbjct: 1560 QEGHISKDC 1568
>gi|291244816|ref|XP_002742290.1| PREDICTED: Vasa-like, partial [Saccoglossus kowalevskii]
Length = 679
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 425 CSNCGKENHTAATCK---------MQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKG 471
C CG+E H + C ++ CF CG H + C +G ++CF
Sbjct: 72 CFKCGEEGHMSRECPKGGGGGGGGSGGGDRSCFKCGEEGHMSRECPKGGGGGRNCFKCGE 131
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC- 530
H++ +CP +G C +CG+ GH C + + C+ C GH+
Sbjct: 132 EGHMSRECP---KGGGGGGRGCFKCGEDGHMSRECP-QGGGGGGRGRGCFKCGEEGHMSR 187
Query: 531 -CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C + + C+ CG+SGH EC N+ G C++CG+ GHFA+ C
Sbjct: 188 DCTSGGLGKSSGGGCFKCGESGHFSRECPNAESGGGGGGGGGNCFRCGESGHFAKDC 244
>gi|359481085|ref|XP_002266540.2| PREDICTED: uncharacterized protein LOC100252970 [Vitis vinifera]
Length = 248
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%)
Query: 398 EAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRW 457
+ K N+VL+ LL+ PR FDPP + C N +E TA C +KQ KPCFLCGSFKH
Sbjct: 128 DIKDNIVLQKLLQAPRCFDPPESSWRMCHNSEEEAPTAVACSAEKQKKPCFLCGSFKHSG 187
Query: 458 KNCKQ 462
+CKQ
Sbjct: 188 NHCKQ 192
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 168 LDEYEKISDLSGFDNLKAMIEAEAFMRRKKRNRKRKKRE-IEFCGQEDVSVSAEEEKGQL 226
LDE++ +SDLS F NL AM+EAEAFMR KK ++RKK+ +EF ++V + E+ Q+
Sbjct: 51 LDEFKMLSDLSNFKNLAAMMEAEAFMRCKKSKKRRKKKRNMEFEAPFPINVDSVREQKQV 110
Query: 227 DKSQPLKVVEVSKPESV 243
D + + V++ + ES+
Sbjct: 111 DTCKSVDTVKLFQIESI 127
>gi|403413797|emb|CCM00497.1| predicted protein [Fibroporia radiculosa]
Length = 178
Score = 73.6 bits (179), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 69/179 (38%), Gaps = 39/179 (21%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLAS 477
P + TC NCG E H + C + + K C+ CG H ++C A+
Sbjct: 21 PKAGTPTCYNCGLEGHVSKECTSETKAKACYRCGQEGHISRDCPDA------------AN 68
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSC--------EGEYHADDLKKIQCYICKSFGHL 529
PG G S+ C RCG +GH +C G + CY C GHL
Sbjct: 69 APPGAIGG--ASTTECYRCGKTGHIARTCPDAASGGGYGGGGGGNFGSKTCYTCGGVGHL 126
Query: 530 C--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CV S CYNC GH+ +C + CY CG EGH +R C
Sbjct: 127 SRDCVQGS-------KCYNCSGVGHISRDCP--------QPQRRACYTCGSEGHISRDC 170
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 69/172 (40%), Gaps = 27/172 (15%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
G+ CF G H A++CP + C CG GH C E A CY
Sbjct: 4 GRGCFNCGGFGHQAANCPKA------GTPTCYNCGLEGHVSKECTSETKAK-----ACYR 52
Query: 523 CKSFGHLC--CVNS------SIIGLKQVSCYNCGQSGHLG---PECANSCEALNGKKSNL 571
C GH+ C ++ +I G CY CG++GH+ P+ A+ G N
Sbjct: 53 CGQEGHISRDCPDAANAPPGAIGGASTTECYRCGKTGHIARTCPDAASGGGYGGGGGGNF 112
Query: 572 ---ICYKCGKEGHFARRC--GSNFKDRLRISDLLFTAERPPTRARHFVGSNG 618
CY CG GH +R C GS + + + +P RA + GS G
Sbjct: 113 GSKTCYTCGGVGHLSRDCVQGSKCYNCSGVGHISRDCPQPQRRACYTCGSEG 164
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 489 SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYN 546
S C CG GH ++C CY C GH+ C + + K +CY
Sbjct: 3 SGRGCFNCGGFGHQAANCP------KAGTPTCYNCGLEGHVSKECTSET----KAKACYR 52
Query: 547 CGQSGHLG---PECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CGQ GH+ P+ AN+ G S CY+CGK GH AR C
Sbjct: 53 CGQEGHISRDCPDAANAPPGAIGGASTTECYRCGKTGHIARTC 95
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 40/103 (38%), Gaps = 19/103 (18%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQ-------------NKPCFLCGSFKHRWKNCKQGQD 465
G ++ C CGK H A TC +K C+ CG H ++C QG
Sbjct: 76 GASTTECYRCGKTGHIARTCPDAASGGGYGGGGGGNFGSKTCYTCGGVGHLSRDCVQGSK 135
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG 508
C+ G H++ DCP + C CG GH C G
Sbjct: 136 CYNCSGVGHISRDCPQPQR------RACYTCGSEGHISRDCPG 172
>gi|221114884|ref|XP_002154581.1| PREDICTED: DNA-binding protein HEXBP-like isoform 1 [Hydra
magnipapillata]
gi|449665534|ref|XP_004206169.1| PREDICTED: DNA-binding protein HEXBP-like isoform 2 [Hydra
magnipapillata]
Length = 209
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 85/192 (44%), Gaps = 33/192 (17%)
Query: 424 TCSNCGKENHTAATCK-------MQKQNKPCFLCGSFKHRWKNCKQ-----------GQD 465
TC CG E H A C QK +K C+ CG H ++C + +
Sbjct: 3 TCYKCGNEGHYARNCTEPSSTETSQKSDKECYRCGEVGHLSRDCSKSSSGGGSGNFDSRT 62
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ S H++ DC T +G C RCG GH CEGE + CY C
Sbjct: 63 CYSCGRSGHISRDC--TQRGGRKGKQRCYRCGKDGHFARDCEGE-------EEMCYTCGK 113
Query: 526 FGHL---CCVNSSIIG-LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
GH+ C + S + CY+C + GH ECA + + ++ ++ CYKC ++GH
Sbjct: 114 AGHIKKDCPESESFTSSTNEQVCYHCNKPGHFARECAE--KDDSSRERDVTCYKCNEKGH 171
Query: 582 FARRCGSNFKDR 593
FAR C + D+
Sbjct: 172 FARDCHNKSNDK 183
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 71/174 (40%), Gaps = 36/174 (20%)
Query: 420 WNSETCSNCGKENHTAATCKM---QKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLA 476
++S TC +CG+ H + C +K + C+ CG K G H A
Sbjct: 58 FDSRTCYSCGRSGHISRDCTQRGGRKGKQRCYRCG---------KDG----------HFA 98
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHL---CCV 532
DC G ++ C CG +GH C E E + CY C GH C
Sbjct: 99 RDCEGEEE-------MCYTCGKAGHIKKDCPESESFTSSTNEQVCYHCNKPGHFARECAE 151
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ V+CY C + GH +C N N KK+ C+KC + GHFAR C
Sbjct: 152 KDDSSRERDVTCYKCNEKGHFARDCHN---KSNDKKNGNTCFKCHQVGHFARDC 202
>gi|157876792|ref|XP_001686738.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
gi|68129813|emb|CAJ09119.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
Length = 271
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 85/201 (42%), Gaps = 41/201 (20%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCK--------QGQDCFI 468
S TC CG+E H + C + ++ CF CG H ++C +G +C+
Sbjct: 42 STTCFRCGEEGHMSRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYK 101
Query: 469 NKGSEHLASDCPGTD----------------QGNNLSSNFCLRCGDSGH---DLSSCEGE 509
HL+ DCP + QG C +CGD+GH D + +G
Sbjct: 102 CGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGG 161
Query: 510 YHADDLKKIQCYICKSFGHLC--CVNS--SIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
Y + CY C GH+ C N G CY CG+SGH+ EC + A +
Sbjct: 162 YSGAGDR--TCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPS---AGS 216
Query: 566 GKKSNLICYKCGKEGHFARRC 586
S+ CYKCGK GH +R C
Sbjct: 217 TGSSDRACYKCGKPGHISREC 237
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 79/190 (41%), Gaps = 44/190 (23%)
Query: 421 NSETCSNCGKENHTAATC-----KMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+S +C NCGKE H A C K +++ CF CG ++G H+
Sbjct: 14 SSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCG---------EEG----------HM 54
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVN 533
+ +CP + + C RCG++GH C K +CY C GHL C +
Sbjct: 55 SRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPS 114
Query: 534 S---SIIGLKQV--------------SCYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
S S G Q +CY CG +GH+ +C N +G + CYKC
Sbjct: 115 SQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSG-AGDRTCYKC 173
Query: 577 GKEGHFARRC 586
G GH +R C
Sbjct: 174 GDAGHISRDC 183
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 43/205 (20%)
Query: 424 TCSNCGKENHTAATCKMQKQNKP-------CFLCGSFKHRWKNCKQGQD----------- 465
TC CG+ H + C KP C+ CG H ++C Q
Sbjct: 71 TCFRCGEAGHMSRDCP--NSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRG 128
Query: 466 -------------CFINKGSEHLASDCPGTDQGNNLSSN-FCLRCGDSGH---DLSSCEG 508
C+ + H++ DCP G + + + C +CGD+GH D + +G
Sbjct: 129 RSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQG 188
Query: 509 EYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPEC--ANSCEAL 564
Y +K CY C GH+ C ++ G +CY CG+ GH+ EC A
Sbjct: 189 GYSGAGDRK--CYKCGESGHMSRECPSAGSTGSSDRACYKCGKPGHISRECPEAGGSYGG 246
Query: 565 NGKKSNLICYKCGKEGHFARRCGSN 589
+ + CYKCG+ GH +R C S+
Sbjct: 247 SRGGGDRTCYKCGEAGHISRDCPSS 271
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 489 SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK-QVSCY 545
SS C CG GH C D + C+ C GH+ C N + G ++C+
Sbjct: 14 SSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMTCF 73
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
CG++GH+ +C NS A G CYKCG+EGH +R C S+
Sbjct: 74 RCGEAGHMSRDCPNS--AKPGAAKGFECYKCGQEGHLSRDCPSS 115
>gi|343426719|emb|CBQ70247.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Sporisorium
reilianum SRZ2]
Length = 178
Score = 72.4 bits (176), Expect = 7e-10, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 71/179 (39%), Gaps = 23/179 (12%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASD 478
+ TC NCG+ H AA C N C+ CG H C Q + C+ + H++ +
Sbjct: 4 NRTCFNCGQPGHNAAACPTAG-NPSCYNCGQQGHISSQCGMEAQPKTCYKCNETGHISRE 62
Query: 479 CPGTDQG-NNLSSNFCLRCGDSGHDLSSCE--------GEYHADDLKKIQCYICKSFGHL 529
CP C +CG GH +C G A CY C GHL
Sbjct: 63 CPTNPAPVAGGPGGECYKCGQHGHIARACPTAGPSTRGGFGGAPRAGGRSCYNCGGVGHL 122
Query: 530 C--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C + + CYNC ++GH+ EC K CY+CG+EGH + C
Sbjct: 123 SRECTSPAGAAAGGQRCYNCNENGHISRECP--------KPQTKSCYRCGEEGHLSAAC 173
Score = 53.9 bits (128), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 50/133 (37%), Gaps = 21/133 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF H A+ CP + C CG GH S C E CY C
Sbjct: 7 CFNCGQPGHNAAACPTAGNPS------CYNCGQQGHISSQCGMEAQPK-----TCYKCNE 55
Query: 526 FGHL---CCVNSS-IIGLKQVSCYNCGQSGHLGPECANSCEALNG------KKSNLICYK 575
GH+ C N + + G CY CGQ GH+ C + + G + CY
Sbjct: 56 TGHISRECPTNPAPVAGGPGGECYKCGQHGHIARACPTAGPSTRGGFGGAPRAGGRSCYN 115
Query: 576 CGKEGHFARRCGS 588
CG GH +R C S
Sbjct: 116 CGGVGHLSRECTS 128
Score = 44.7 bits (104), Expect = 0.16, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
SCYNCGQ GH+ +C + CYKC + GH +R C +N
Sbjct: 27 SCYNCGQQGHISSQCGMEAQPKT-------CYKCNETGHISRECPTN 66
>gi|71416081|ref|XP_810084.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|70874565|gb|EAN88233.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma cruzi]
Length = 193
Score = 72.0 bits (175), Expect = 9e-10, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 74/179 (41%), Gaps = 23/179 (12%)
Query: 424 TCSNCGKENHTAATCKM----QKQNKPCFLCGSFKHRWKNCKQ-------GQDCFINKGS 472
TC CG+ H A C ++ C+ CG H + C G+ C+
Sbjct: 19 TCHRCGETGHFARECPNIPPGAMGDRACYNCGQPGHLSRECPTRPPGAMGGRACYNCGQP 78
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC-- 530
HL+ +CP G + C CG GH C + CY C GHL
Sbjct: 79 GHLSRECPTRPPGA-MGGRACYNCGQPGHLSRECPTR-PPGAMGDRACYNCGRMGHLSHE 136
Query: 531 CVNSSIIGLKQVS---CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C N G + V+ CY+C Q GHL +C N+ G+++ CY CG+ GH +R C
Sbjct: 137 CPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPG--GERA---CYNCGQTGHISRAC 190
Score = 59.7 bits (143), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 49/126 (38%), Gaps = 7/126 (5%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
G C + H A +CP G + C CG GH C + CY
Sbjct: 17 GSTCHRCGETGHFARECPNIPPGA-MGDRACYNCGQPGHLSRECPTR-PPGAMGGRACYN 74
Query: 523 CKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
C GHL C + +CYNCGQ GHL EC G ++ CY CG+ G
Sbjct: 75 CGQPGHLSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPGAMGDRA---CYNCGRMG 131
Query: 581 HFARRC 586
H + C
Sbjct: 132 HLSHEC 137
>gi|154345732|ref|XP_001568803.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066145|emb|CAM43935.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 276
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 82/199 (41%), Gaps = 42/199 (21%)
Query: 425 CSNCGKENHTAATC-----KMQKQNKPCFLCGSFKHRWKNC----KQGQD----CFINKG 471
C NCGKE H A C K +++ CF CG H + C K G CF
Sbjct: 18 CRNCGKEGHYARECPEADAKGDERSTTCFRCGEAGHMSRECPNEAKSGAAGAMACFRCGE 77
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC--------------------EGEYH 511
+ H++ DCP + + C +CG GH C +G Y
Sbjct: 78 AGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGGRGGYGQKRGRNGAQGGYG 137
Query: 512 ADDLKKIQCYICKSFGHLC--CVNS--SIIGLKQVSCYNCGQSGHLGPECANSCEALNGK 567
D CY C GH+ C NS G +CY CG+SGH+ +C NS +G
Sbjct: 138 GDRT----CYKCGDAGHISRDCPNSQGGYSGAGDRTCYKCGESGHISRDCPNSQGGYSG- 192
Query: 568 KSNLICYKCGKEGHFARRC 586
+ CYKCGK GH +R C
Sbjct: 193 AGDRTCYKCGKPGHMSREC 211
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 83/203 (40%), Gaps = 40/203 (19%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCK--------QGQDCFI 468
S TC CG+ H + C + ++ CF CG H ++C +G +C+
Sbjct: 42 STTCFRCGEAGHMSRECPNEAKSGAAGAMACFRCGEAGHMSRDCPNSAKPGAAKGFECYK 101
Query: 469 NKGSEHLASDCPGTD----------------QGNNLSSNFCLRCGDSGH---DLSSCEGE 509
HL+ DCP + QG C +CGD+GH D + +G
Sbjct: 102 CGQEGHLSRDCPSSQGGGRGGYGQKRGRNGAQGGYGGDRTCYKCGDAGHISRDCPNSQGG 161
Query: 510 YHADDLKKIQCYICKSFGHLC--CVNS--SIIGLKQVSCYNCGQSGHLGPEC--ANSCEA 563
Y + CY C GH+ C NS G +CY CG+ GH+ EC A
Sbjct: 162 YSGAGDR--TCYKCGESGHISRDCPNSQGGYSGAGDRTCYKCGKPGHMSRECPEAGGSYG 219
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
+ + CYKCGK GH +R C
Sbjct: 220 GSRGGGDRTCYKCGKPGHMSREC 242
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 489 SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK-QVSCY 545
S C CG GH C D + C+ C GH+ C N + G ++C+
Sbjct: 14 SGTGCRNCGKEGHYARECPEADAKGDERSTTCFRCGEAGHMSRECPNEAKSGAAGAMACF 73
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
CG++GH+ +C NS A G CYKCG+EGH +R C S+
Sbjct: 74 RCGEAGHMSRDCPNS--AKPGAAKGFECYKCGQEGHLSRDCPSS 115
>gi|729704|sp|Q04832.1|HEXP_LEIMA RecName: Full=DNA-binding protein HEXBP; AltName:
Full=Hexamer-binding protein
gi|159342|gb|AAA29245.1| HEXBP DNA binding protein [Leishmania major]
Length = 271
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 86/201 (42%), Gaps = 41/201 (20%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCK--------QGQDCFI 468
S TC CG+E H + C + ++ CF CG H ++C +G +C+
Sbjct: 42 STTCFRCGEEGHMSRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYK 101
Query: 469 NKGSEHLASDCPGTD----------------QGNNLSSNFCLRCGDSGH---DLSSCEGE 509
HL+ DCP + QG C +CGD+GH D + +G
Sbjct: 102 CGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGG 161
Query: 510 YHADDLKKIQCYICKSFGHLC--CVNS--SIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
Y + CY C GH+ C N G CY CG+SGH+ EC ++ +
Sbjct: 162 YSGAGDR--TCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSTGS 219
Query: 566 GKKSNLICYKCGKEGHFARRC 586
G ++ CYKCGK GH +R C
Sbjct: 220 GDRA---CYKCGKPGHISREC 237
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 80/203 (39%), Gaps = 42/203 (20%)
Query: 421 NSETCSNCGKENHTAATC-----KMQKQNKPCFLCGSFKHRWKNCKQ--------GQDCF 467
+S +C NCGKE H A C K +++ CF CG H + C CF
Sbjct: 14 SSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMTCF 73
Query: 468 INKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC--------------------E 507
+ H++ DCP + + C +CG GH C +
Sbjct: 74 RCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQ 133
Query: 508 GEYHADDLKKIQCYICKSFGHLC--CVNS--SIIGLKQVSCYNCGQSGHLGPECANSCEA 563
G Y D CY C GH+ C N G +CY CG +GH+ +C N
Sbjct: 134 GGYSGDRT----CYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGG 189
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
+G + CYKCG+ GH +R C
Sbjct: 190 YSGA-GDRKCYKCGESGHMSREC 211
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 43/205 (20%)
Query: 424 TCSNCGKENHTAATCKMQKQNKP-------CFLCGSFKHRWKNCKQGQD----------- 465
TC CG+ H + C KP C+ CG H ++C Q
Sbjct: 71 TCFRCGEAGHMSRDCP--NSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRG 128
Query: 466 -------------CFINKGSEHLASDCPGTDQGNNLSSN-FCLRCGDSGH---DLSSCEG 508
C+ + H++ DCP G + + + C +CGD+GH D + +G
Sbjct: 129 RSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQG 188
Query: 509 EYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPEC--ANSCEAL 564
Y +K CY C GH+ C ++ G +CY CG+ GH+ EC A
Sbjct: 189 GYSGAGDRK--CYKCGESGHMSRECPSAGSTGSGDRACYKCGKPGHISRECPEAGGSYGG 246
Query: 565 NGKKSNLICYKCGKEGHFARRCGSN 589
+ + CYKCG+ GH +R C S+
Sbjct: 247 SRGGGDRTCYKCGEAGHISRDCPSS 271
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 489 SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK-QVSCY 545
SS C CG GH C D + C+ C GH+ C N + G ++C+
Sbjct: 14 SSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMTCF 73
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
CG++GH+ +C NS A G CYKCG+EGH +R C S+
Sbjct: 74 RCGEAGHMSRDCPNS--AKPGAAKGFECYKCGQEGHLSRDCPSS 115
>gi|401420042|ref|XP_003874510.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490746|emb|CBZ26010.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 298
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 86/201 (42%), Gaps = 41/201 (20%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNC----KQGQ----DCFI 468
S TC CG+E H + C + ++ CF CG H ++C KQG +C+
Sbjct: 42 SSTCFRCGEEGHMSRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKQGAAKGFECYK 101
Query: 469 NKGSEHLASDCPGTD----------------QGNNLSSNFCLRCGDSGH---DLSSCEGE 509
HL+ DCP + QG C +CGD+GH D + +G
Sbjct: 102 CGQEGHLSRDCPSSQGGSRGGYGQKRGRNGAQGGYGGDRACYKCGDAGHISRDCPNGQGG 161
Query: 510 YHADDLKKIQCYICKSFGHLC--CVNS--SIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
Y + CY C GH+ C N G CY CG+SGH+ EC ++ +
Sbjct: 162 YSGAGDR--TCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHISRECPSAGSTGS 219
Query: 566 GKKSNLICYKCGKEGHFARRC 586
G + CYKCGK GH +R C
Sbjct: 220 GDR---TCYKCGKPGHISREC 237
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 78/190 (41%), Gaps = 44/190 (23%)
Query: 421 NSETCSNCGKENHTAATC-----KMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+S C NCGKE H A C K +++ CF CG ++G H+
Sbjct: 14 SSTGCRNCGKEGHYARECPEADSKGDERSSTCFRCG---------EEG----------HM 54
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVN 533
+ +CP + + C RCG++GH C K +CY C GHL C +
Sbjct: 55 SRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKQGAAKGFECYKCGQEGHLSRDCPS 114
Query: 534 S---SIIGLKQV--------------SCYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
S S G Q +CY CG +GH+ +C N +G + CYKC
Sbjct: 115 SQGGSRGGYGQKRGRNGAQGGYGGDRACYKCGDAGHISRDCPNGQGGYSG-AGDRTCYKC 173
Query: 577 GKEGHFARRC 586
G GH +R C
Sbjct: 174 GDAGHISRDC 183
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 85/188 (45%), Gaps = 23/188 (12%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHLASDC 479
C CG+E H + C + G + R +N QG + C+ + H++ DC
Sbjct: 99 CYKCGQEGHLSRDCPSSQGGS---RGGYGQKRGRNGAQGGYGGDRACYKCGDAGHISRDC 155
Query: 480 PGTDQGNNLSSN-FCLRCGDSGH---DLSSCEGEYHADDLKKIQCYICKSFGHLC--CVN 533
P G + + + C +CGD+GH D + +G Y +K CY C GH+ C +
Sbjct: 156 PNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRK--CYKCGESGHISRECPS 213
Query: 534 SSIIGLKQVSCYNCGQSGHLG---PECANSCEALNGKKSNLICYKCGKEGHFARRC---- 586
+ G +CY CG+ GH+ PE S G S+ CYKCG+ GH +R C
Sbjct: 214 AGSTGSGDRTCYKCGKPGHISRECPEAGGSYGGSRGGGSDRTCYKCGEAGHMSRECPSAG 273
Query: 587 GSNFKDRL 594
G+ DR
Sbjct: 274 GTGSGDRA 281
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 444 NKPCFLCGSFKHRWKNCKQGQDCFINKG---------SEHLASDCPGTDQGNNLSSNF-C 493
++ C+ CG H ++C GQ + G + H++ DCP G + + + C
Sbjct: 139 DRACYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRKC 198
Query: 494 LRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQV------SCY 545
+CG+SGH C + CY C GH+ C + +CY
Sbjct: 199 YKCGESGHISRECPSAGSTGSGDRT-CYKCGKPGHISRECPEAGGSYGGSRGGGSDRTCY 257
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CG++GH+ EC ++ +G ++ CYKCG+ GH +R C
Sbjct: 258 KCGEAGHMSRECPSAGGTGSGDRA---CYKCGEAGHISRDC 295
>gi|384247042|gb|EIE20530.1| hypothetical protein COCSUDRAFT_10924, partial [Coccomyxa
subellipsoidea C-169]
Length = 102
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 31/133 (23%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C CG + H A C +++ +PC LCG F H C
Sbjct: 1 CFKCGGQGHMARDCPNEERQRPCHLCGQFGHTRYQCS----------------------- 37
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSC 544
++ C+ C G C GEY DL++ C C GHLCC + + ++ SC
Sbjct: 38 ----NTLLCIHCRAEG----GCTGEYLEGDLRQALCVACGRRGHLCCQLAEGLPPRKTSC 89
Query: 545 YNCGQSGHLGPEC 557
YNCG+ GH+ +C
Sbjct: 90 YNCGEGGHVAEDC 102
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 51/122 (41%), Gaps = 21/122 (17%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF G H+A DCP N C CG GH C + C C++
Sbjct: 1 CFKCGGQGHMARDCP-----NEERQRPCHLCGQFGHTRYQCS--------NTLLCIHCRA 47
Query: 526 FGHLCCVNSSIIG-LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
G C + G L+Q C CG+ GHL C E L +K++ CY CG+ GH A
Sbjct: 48 EGG--CTGEYLEGDLRQALCVACGRRGHL---CCQLAEGLPPRKTS--CYNCGEGGHVAE 100
Query: 585 RC 586
C
Sbjct: 101 DC 102
>gi|71418284|ref|XP_810806.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|70875395|gb|EAN88955.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma cruzi]
Length = 193
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 74/179 (41%), Gaps = 23/179 (12%)
Query: 424 TCSNCGKENHTAATCKM----QKQNKPCFLCGSFKHRWKNCKQ-------GQDCFINKGS 472
TC CG+ H A C ++ C+ CG H + C G+ C+
Sbjct: 19 TCHRCGETGHFARECPNIPPGAMGDRACYNCGQPGHLSRECPTRPPGAMGGRACYNCGQP 78
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC-- 530
HL+ +CP G + C CG GH C + CY C GHL
Sbjct: 79 GHLSRECPTRPPGA-MGGRACYNCGQPGHLSRECPTR-PPGVMGDRACYNCGRMGHLSRE 136
Query: 531 CVNSSIIGLKQVS---CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C N G + V+ CY+C Q GHL +C N+ G+++ CY CG+ GH +R C
Sbjct: 137 CPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPG--GERA---CYNCGQTGHISRAC 190
Score = 62.4 bits (150), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 51/126 (40%), Gaps = 7/126 (5%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
G C + H A +CP G + C CG GH C + CY
Sbjct: 17 GSTCHRCGETGHFARECPNIPPGA-MGDRACYNCGQPGHLSRECPTR-PPGAMGGRACYN 74
Query: 523 CKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
C GHL C + +CYNCGQ GHL EC + G ++ CY CG+ G
Sbjct: 75 CGQPGHLSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPGVMGDRA---CYNCGRMG 131
Query: 581 HFARRC 586
H +R C
Sbjct: 132 HLSREC 137
>gi|146104187|ref|XP_001469754.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania infantum JPCM5]
gi|398024252|ref|XP_003865287.1| universal minicircle sequence binding protein (UMSBP), putative
[Leishmania donovani]
gi|134074124|emb|CAM72866.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania infantum JPCM5]
gi|322503524|emb|CBZ38610.1| universal minicircle sequence binding protein (UMSBP), putative
[Leishmania donovani]
Length = 271
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 87/202 (43%), Gaps = 43/202 (21%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCK--------QGQDCFI 468
S TC CG+E H C + ++ CF CG H ++C +G +C+
Sbjct: 42 STTCFRCGEEGHMTRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECY- 100
Query: 469 NKGSE-HLASDCPGTD----------------QGNNLSSNFCLRCGDSGH---DLSSCEG 508
N G E HL+ DCP + QG C +CGD+GH D + +G
Sbjct: 101 NCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQG 160
Query: 509 EYHADDLKKIQCYICKSFGHLC--CVNS--SIIGLKQVSCYNCGQSGHLGPECANSCEAL 564
Y + CY C GH+ C N G CY CG+SGH+ EC ++
Sbjct: 161 GYSGAGDR--TCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSA--GS 216
Query: 565 NGKKSNLICYKCGKEGHFARRC 586
NG + CYKCGK GH +R C
Sbjct: 217 NG-SGDRTCYKCGKPGHISREC 237
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H A +CP D + S C RCG+ GH C E + + C+ C GH+ C
Sbjct: 26 HYARECPEADSKGDGRSTTCFRCGEEGHMTRECPNEARSGAAGAMTCFRCGEAGHMSRDC 85
Query: 532 VNSSIIG-LKQVSCYNCGQSGHLGPECANS--------------CEALNGKKSNLICYKC 576
NS+ G K CYNCGQ GHL +C +S A G + CYKC
Sbjct: 86 PNSAKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKC 145
Query: 577 GKEGHFARRC 586
G GH +R C
Sbjct: 146 GDAGHISRDC 155
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 81/209 (38%), Gaps = 45/209 (21%)
Query: 421 NSETCSNCGKENHTAATC-----KMQKQNKPCFLCGSFKHRWKNCKQ--------GQDCF 467
+S +C NCGKE H A C K ++ CF CG H + C CF
Sbjct: 14 SSTSCRNCGKEGHYARECPEADSKGDGRSTTCFRCGEEGHMTRECPNEARSGAAGAMTCF 73
Query: 468 INKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC--------------------E 507
+ H++ DCP + + C CG GH C +
Sbjct: 74 RCGEAGHMSRDCPNSAKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQ 133
Query: 508 GEYHADDLKKIQCYICKSFGHLC--CVNS--SIIGLKQVSCYNCGQSGHLGPECANSCEA 563
G Y D CY C GH+ C N G +CY CG +GH+ +C N
Sbjct: 134 GGYGGDRT----CYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGG 189
Query: 564 LNGKKSNLICYKCGKEGHFARRC---GSN 589
+G + CYKCG+ GH +R C GSN
Sbjct: 190 YSGA-GDRKCYKCGESGHMSRECPSAGSN 217
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHLASDC 479
C NCG+E H + C + G + R ++ QG + C+ + H++ DC
Sbjct: 99 CYNCGQEGHLSRDCPSSQGGS---RGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDC 155
Query: 480 PGTDQGNNLSSN-FCLRCGDSGH---DLSSCEGEYHADDLKKIQCYICKSFGHLC--CVN 533
P G + + + C +CGD+GH D + +G Y +K CY C GH+ C +
Sbjct: 156 PNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRK--CYKCGESGHMSRECPS 213
Query: 534 SSIIGLKQVSCYNCGQSGHLGPEC--ANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ G +CY CG+ GH+ EC A + + CYKCG+ GH +R C
Sbjct: 214 AGSNGSGDRTCYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268
>gi|452819791|gb|EME26843.1| cellular nucleic acid-binding protein [Galdieria sulphuraria]
Length = 301
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 65/160 (40%), Gaps = 46/160 (28%)
Query: 413 RYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGS 472
RYF ++ CSNCG H + C + + CFLCG G
Sbjct: 91 RYFSE---SNVVCSNCGLAGHFSVFCPEEVVGRRCFLCG-------------------GE 128
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC--------EGEYHA-------DDLKK 517
HLA +C S C C GH +C E HA ++KK
Sbjct: 129 GHLARNC---------SEELCHNCLRPGHKRKNCTLPRRDWRREEKHAYPKYEDLKNVKK 179
Query: 518 IQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
++CYIC GHL C + K +SCYNCGQSGH G C
Sbjct: 180 LKCYICGKTGHLDCSFEKMKFCKSISCYNCGQSGHSGGSC 219
>gi|71004674|ref|XP_757003.1| hypothetical protein UM00856.1 [Ustilago maydis 521]
gi|46096697|gb|EAK81930.1| hypothetical protein UM00856.1 [Ustilago maydis 521]
Length = 189
Score = 70.1 bits (170), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 37/179 (20%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLAS 477
P + +C NCG++ H ++ C M+ Q K C+ C + H++
Sbjct: 33 PTAGNPSCYNCGQQGHISSQCGMEAQPKTCYKCSE-------------------TGHISR 73
Query: 478 DCPGTDQGNNLSSNF-CLRCGDSGHDLSSC-------EGEYHADDLKKIQCYICKSFGHL 529
+CP C +CG GH +C G + CY C GHL
Sbjct: 74 ECPTNPAPAAGGPGGECYKCGQHGHIARACPTAGGSSRGGFGGARSGGRSCYNCGGVGHL 133
Query: 530 C--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C + + CYNC +SGH+ EC K CY+CG EGH + C
Sbjct: 134 SRECTSPAGAAAGGQRCYNCNESGHISRECP--------KPQTKSCYRCGDEGHLSAAC 184
Score = 49.3 bits (116), Expect = 0.006, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 48/129 (37%), Gaps = 20/129 (15%)
Query: 475 LASDCPGTDQGNNLSS------NFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
L D P + G+N ++ C CG GH S C E CY C GH
Sbjct: 16 LCGDAPTSSAGHNAAACPTAGNPSCYNCGQQGHISSQCGMEAQPK-----TCYKCSETGH 70
Query: 529 L---CCVNSSIIGLKQVS-CYNCGQSGHLGPECANSCEALNGKKSNLI-----CYKCGKE 579
+ C N + CY CGQ GH+ C + + G CY CG
Sbjct: 71 ISRECPTNPAPAAGGPGGECYKCGQHGHIARACPTAGGSSRGGFGGARSGGRSCYNCGGV 130
Query: 580 GHFARRCGS 588
GH +R C S
Sbjct: 131 GHLSRECTS 139
Score = 45.1 bits (105), Expect = 0.14, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
SCYNCGQ GH+ +C + CYKC + GH +R C +N
Sbjct: 39 SCYNCGQQGHISSQCGMEAQPKT-------CYKCSETGHISRECPTN 78
>gi|326533496|dbj|BAK05279.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1027
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 71/184 (38%), Gaps = 36/184 (19%)
Query: 422 SETCSNCGKENHTAATCK-----MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLA 476
S+ CS CG H+ C MQ+ + S+ G CF H +
Sbjct: 831 SQNCSVCGSSEHSVQNCPAVAMDMQQPAASGYAASSYGSSPGEAGSGL-CFKCNQPGHFS 889
Query: 477 SDCPGTDQGN--------NLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
+CP + + N +S C +C GH C G+ S+G
Sbjct: 890 RECPQQEATSYRSPAANANANSGLCFKCNQPGHFSRDCPGQ------------AANSYGA 937
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPEC----ANSCEALNGKKSNL--ICYKCGKEGHF 582
VN+ GL CY C Q+GH +C ANS A G S +CYKC + GHF
Sbjct: 938 SAGVNAGAAGL----CYKCNQTGHFARDCPGQAANSYGASAGANSGTAGLCYKCNQPGHF 993
Query: 583 ARRC 586
AR C
Sbjct: 994 ARDC 997
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 82/214 (38%), Gaps = 35/214 (16%)
Query: 436 ATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLR 495
AT + + ++ C +CGS +H +NC + A+ G+ G S C +
Sbjct: 823 ATPSITRYSQNCSVCGSSEHSVQNCPAVAMDMQQPAASGYAASSYGSSPGE-AGSGLCFK 881
Query: 496 CGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGP 555
C GH C + + +S NS + C+ C Q GH
Sbjct: 882 CNQPGHFSRECPQQ---------EATSYRSPAANANANSGL-------CFKCNQPGHFSR 925
Query: 556 EC----ANSCEALNGKKSNL--ICYKCGKEGHFARRC--------GSNFKDRLRISDLLF 601
+C ANS A G + +CYKC + GHFAR C G++ + L +
Sbjct: 926 DCPGQAANSYGASAGVNAGAAGLCYKCNQTGHFARDCPGQAANSYGASAGANSGTAGLCY 985
Query: 602 TAERPPTRARHFVGSNGTP----HGLGNAQGREN 631
+P AR G TP +G G A GR N
Sbjct: 986 KCNQPGHFARDCQGQAATPQRQAYGNGAASGRYN 1019
>gi|3661541|gb|AAC61751.1| poly-zinc finger protein 1 [Trypanosoma cruzi]
Length = 193
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 73/179 (40%), Gaps = 23/179 (12%)
Query: 424 TCSNCGKENHTAATCKM----QKQNKPCFLCGSFKHRWKNCKQ-------GQDCFINKGS 472
TC CG+ H A C ++ C+ CG H + C G+ C+
Sbjct: 19 TCHRCGETGHFARECPNIPPGAMGDRACYNCGQPGHLSRGCPTRPPGAMGGRACYNCGQP 78
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC-- 530
H + +CP G + C CG GH C + CY C GHL
Sbjct: 79 GHPSRECPTRPPGA-MGGRACYNCGQPGHLSRECPTR-PPGTMGDRACYKCGRMGHLSRE 136
Query: 531 CVNSSIIGLKQVS---CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C N G + V+ CY+C Q GHL +C N+ G+++ CY CG+ GH +R C
Sbjct: 137 CPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPG--GERA---CYNCGQTGHTSRAC 190
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 50/126 (39%), Gaps = 7/126 (5%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
G C + H A +CP G + C CG GH C + CY
Sbjct: 17 GSTCHRCGETGHFARECPNIPPGA-MGDRACYNCGQPGHLSRGCPTR-PPGAMGGRACYN 74
Query: 523 CKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
C GH C + +CYNCGQ GHL EC G ++ CYKCG+ G
Sbjct: 75 CGQPGHPSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPGTMGDRA---CYKCGRMG 131
Query: 581 HFARRC 586
H +R C
Sbjct: 132 HLSREC 137
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 56/146 (38%), Gaps = 23/146 (15%)
Query: 417 PPG-WNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
PPG C NCG+ H + C R G+ C+ HL
Sbjct: 63 PPGAMGGRACYNCGQPGHPSRECPT---------------RPPGAMGGRACYNCGQPGHL 107
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD--DLKKIQCYICKSFGHLC--C 531
+ +CP G + C +CG GH C + + CY C+ GHL C
Sbjct: 108 SRECPTRPPG-TMGDRACYKCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDC 166
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPEC 557
N+ G + +CYNCGQ+GH C
Sbjct: 167 PNAPPGG--ERACYNCGQTGHTSRAC 190
>gi|297263145|ref|XP_001093980.2| PREDICTED: hypothetical protein LOC705622 [Macaca mulatta]
Length = 343
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 83/215 (38%), Gaps = 55/215 (25%)
Query: 404 VLRMLLRKPRYFDPP------------GWNSETCSNCGKENHTAATC------------- 438
LR + +P PP +S C CG+ H A C
Sbjct: 146 TLRAVFPRPASESPPLRVRSDAEDLTAAMSSNECFKCGRSGHWARECPTGGGRGRGMRSR 205
Query: 439 ----KMQKQNKP--CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSN 491
+ + P C+ CG H K+C +D N G H+A DC +
Sbjct: 206 GRGFQFVSSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQ 262
Query: 492 FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSG 551
C CG GH C+ HAD+ K CY C FGH+ +V CY CG++G
Sbjct: 263 CCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETG 310
Query: 552 HLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ C+ K S + CY+CG+ GH AR C
Sbjct: 311 HVAINCS--------KTSEVNCYRCGESGHLAREC 337
>gi|400621674|gb|AFP87471.1| vasa-like protein, partial [Nematostella vectensis]
Length = 906
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 424 TCSNCGKENHTAATCK----MQKQNKPCFLCGSFKHRWKNCK----QGQDCFINKGSE-- 473
C CG+E H + C Q + C CG H + C QG +K E
Sbjct: 170 ACHRCGQEGHFSRDCPNPPTRQGNGRACHKCGEEGHFARECPNQPSQGGARACHKCGEEG 229
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H A +CP +Q + C +CG+ GH C + + C+ C+ GH C
Sbjct: 230 HFARECP--NQPSQGGGRACHKCGEEGHFARECPNQPSQGGWC-LTCHKCREEGHYARDC 286
Query: 532 VNSSIIGLKQV-SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
N G+ +C+ CG+ GH EC N G N C+KCG+EGHF+R C
Sbjct: 287 PNQPSQGMGGGGACHKCGKEGHFSRECPNQDSQRIGGGRN--CHKCGQEGHFSREC 340
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 74/181 (40%), Gaps = 28/181 (15%)
Query: 422 SETCSNCGKENHTAATCKMQKQ---NKPCFLCGSFKHRWKNCK----QGQDCFI-NKGSE 473
+ C CG+E H A C Q + C CG H + C QG C +K E
Sbjct: 219 ARACHKCGEEGHFARECPNQPSQGGGRACHKCGEEGHFARECPNQPSQGGWCLTCHKCRE 278
Query: 474 --HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI----QCYICKSFG 527
H A DCP C +CG GH C + D ++I C+ C G
Sbjct: 279 EGHYARDCPNQPSQGMGGGGACHKCGKEGHFSRECPNQ----DSQRIGGGRNCHKCGQEG 334
Query: 528 HLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
H C N + G +C+ CG+ GH EC G+ + C+KCG+ GH++R
Sbjct: 335 HFSRECPNQTSQG--SGTCHKCGEVGHFARECPT------GRGQSDTCHKCGETGHYSRE 386
Query: 586 C 586
C
Sbjct: 387 C 387
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 72/180 (40%), Gaps = 22/180 (12%)
Query: 421 NSETCSNCGKENHTAATCKMQKQN---KPCFLCGSFKHRWKNCKQ------GQDCFINKG 471
N C CG+E H A C Q + C CG H + C G+ C
Sbjct: 193 NGRACHKCGEEGHFARECPNQPSQGGARACHKCGEEGHFARECPNQPSQGGGRACHKCGE 252
Query: 472 SEHLASDCPG-TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC 530
H A +CP QG + C +C + GH C + C+ C GH
Sbjct: 253 EGHFARECPNQPSQGGWCLT--CHKCREEGHYARDCPNQPSQGMGGGGACHKCGKEGHFS 310
Query: 531 --CVN--SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C N S IG + +C+ CGQ GH EC N +G C+KCG+ GHFAR C
Sbjct: 311 RECPNQDSQRIGGGR-NCHKCGQEGHFSRECPNQTSQGSG-----TCHKCGEVGHFAREC 364
>gi|348570490|ref|XP_003471030.1| PREDICTED: cellular nucleic acid-binding protein-like [Cavia
porcellus]
Length = 169
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 64/150 (42%), Gaps = 25/150 (16%)
Query: 438 CKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCG 497
C Q+ C+ CG+ H KNC C+ S H+A DCP Q C C
Sbjct: 38 CSSASQSDICYRCGAAGHYAKNCDLQDICYSCGKSGHIAKDCPEPKQ---QKEQCCYTCS 94
Query: 498 DSGHDLSSCEGEYHADDLKKIQ-CYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPE 556
GH C D +K+Q CY C GH+ QV CY CG++GH+
Sbjct: 95 RPGHLARDC-------DQRKVQKCYTCGESGHI------QKDCAQVRCYRCGETGHMAMS 141
Query: 557 CANSCEALNGKKSNLICYKCGKEGHFARRC 586
C K S + CY+CG+ GH AR C
Sbjct: 142 C--------NKASEVNCYRCGEAGHIAREC 163
>gi|320040571|gb|EFW22504.1| zinc knuckle protein [Coccidioides posadasii str. Silveira]
gi|392862016|gb|EAS37384.2| zinc knuckle domain-containing protein [Coccidioides immitis RS]
Length = 199
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 78/191 (40%), Gaps = 32/191 (16%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ--------GQDCF 467
D P S C NCG E H + C + K C+ CG H ++C Q GQ+C+
Sbjct: 19 DCPKKGSVICYNCGGEGHVSRDCNEPAKEKSCYRCGLTGHISRDCPQAGESGGARGQECY 78
Query: 468 INKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL------------ 515
H++ +CP + C +CG GH +C G+Y +
Sbjct: 79 KCGQVGHISRECPQGGESGEARGQECYKCGQVGHISRNC-GQYSGYNGGGYNAGSYRYGN 137
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
+ + CY C +GH G K CYNCG++GH+ +C K +CYK
Sbjct: 138 RPLTCYSCGGYGHR--ARDCTQGQK---CYNCGETGHVSRDCTTE------GKGERVCYK 186
Query: 576 CGKEGHFARRC 586
C + GH C
Sbjct: 187 CKQPGHVQAAC 197
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 53/125 (42%), Gaps = 16/125 (12%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF S H A DCP S C CG GH C + K+ CY C
Sbjct: 7 CFTCGDSAHQARDCP------KKGSVICYNCGGEGHVSRDCN-----EPAKEKSCYRCGL 55
Query: 526 FGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
GH+ C G + CY CGQ GH+ EC E+ G+ CYKCG+ GH
Sbjct: 56 TGHISRDCPQAGESGGARGQECYKCGQVGHISRECPQGGES--GEARGQECYKCGQVGHI 113
Query: 583 ARRCG 587
+R CG
Sbjct: 114 SRNCG 118
>gi|15233440|ref|NP_195326.1| cellular nucleic acid-binding protein [Arabidopsis thaliana]
gi|75318587|sp|O65639.1|CSP1_ARATH RecName: Full=Cold shock protein 1; Short=AtCSP1; AltName:
Full=Cold shock domain-containing protein 1
gi|3036806|emb|CAA18496.1| glycine-rich protein [Arabidopsis thaliana]
gi|7270554|emb|CAB81511.1| glycine-rich protein [Arabidopsis thaliana]
gi|110741941|dbj|BAE98911.1| glycine-rich protein [Arabidopsis thaliana]
gi|332661203|gb|AEE86603.1| cellular nucleic acid-binding protein [Arabidopsis thaliana]
Length = 299
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 74/181 (40%), Gaps = 34/181 (18%)
Query: 425 CSNCGKENHTAATC----------KMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEH 474
C NCG H A C + N C+ CG H ++C Q + G +
Sbjct: 134 CYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKS---VGNGDQR 190
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI-----QCYICKSFGHL 529
G +G N + C CGD GH C + A +++ CY C GH
Sbjct: 191 ------GAVKGGN---DGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGH- 240
Query: 530 CCVNSSIIGLKQVS--CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG 587
+ +Q S CY CG SGHL +C G ++ CYKCGKEGHFAR C
Sbjct: 241 --IARDCATKRQPSRGCYQCGGSGHLARDCDQ--RGSGGGGNDNACYKCGKEGHFARECS 296
Query: 588 S 588
S
Sbjct: 297 S 297
>gi|291411194|ref|XP_002721877.1| PREDICTED: zinc finger protein 9 [Oryctolagus cuniculus]
Length = 171
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 69/148 (46%), Gaps = 30/148 (20%)
Query: 443 QNKPCFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDC--PGTDQGNNLSSNFCLRCGDS 499
Q C+ CG H KNC + QD N G + H+A DC P ++ +C CG
Sbjct: 43 QADICYRCGESGHHAKNCDRLQDICYNCGKTGHIAKDCLEPKRER-----EQYCYTCGRQ 97
Query: 500 GHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
GH C L++ +CY C FGH QV CY CG++GH+
Sbjct: 98 GHLARDC------THLEEQKCYSCGEFGHF------QKECTQVKCYRCGETGHV------ 139
Query: 560 SCEALNGKKSNLI-CYKCGKEGHFARRC 586
A+N KK+ + CY+CG+ GH AR C
Sbjct: 140 ---AINCKKAKQVNCYRCGEFGHLAREC 164
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC-----KQGQDCFINKGSEHLA 476
++ C CG+ H A C + C+ CG H K+C ++ Q C+ HLA
Sbjct: 44 ADICYRCGESGHHAKNC--DRLQDICYNCGKTGHIAKDCLEPKREREQYCYTCGRQGHLA 101
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DC +L C CG+ GH C +++CY C GH V +
Sbjct: 102 RDC------THLEEQKCYSCGEFGHFQKEC---------TQVKCYRCGETGH---VAINC 143
Query: 537 IGLKQVSCYNCGQSGHLGPECAN 559
KQV+CY CG+ GHL EC N
Sbjct: 144 KKAKQVNCYRCGEFGHLARECDN 166
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 415 FDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEH 474
+P + C CG++ H A C ++ K C+ CG F H K C Q + C+ + H
Sbjct: 81 LEPKREREQYCYTCGRQGHLARDCTHLEEQK-CYSCGEFGHFQKECTQVK-CYRCGETGH 138
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD 513
+A +C Q N C RCG+ GH C+ E +D
Sbjct: 139 VAINCKKAKQVN------CYRCGEFGHLARECDNEMASD 171
>gi|358346811|ref|XP_003637458.1| Transcription elongation factor SPT6 [Medicago truncatula]
gi|355503393|gb|AES84596.1| Transcription elongation factor SPT6 [Medicago truncatula]
Length = 2159
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 70/189 (37%), Gaps = 27/189 (14%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-------PCFLCGSFKHRWKNCKQ----------GQDC 466
+C CG+ H A C + C+ CG H + C Q G C
Sbjct: 1401 SCYKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGGRGGGGSC 1460
Query: 467 FINKGSEHLASDCP---GTDQGNNLSSNFCLRCGDSGHDLSSC--EGEYHADDLKKIQCY 521
+ S H+A +C G C +CG+SGH C EG CY
Sbjct: 1461 YKCGESGHMARECTQEGGGGGRGGGGGGTCYKCGESGHMARDCTQEGGGGGGRGGGGSCY 1520
Query: 522 ICKSFGHLC--CVN--SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
C GH+ C +CY CG+SGH+ EC G + CYKCG
Sbjct: 1521 KCGESGHMARECTQEGGGGGRGGGGTCYKCGESGHMARECTQE-GGGGGGRGGGACYKCG 1579
Query: 578 KEGHFARRC 586
+ GH AR C
Sbjct: 1580 ESGHMAREC 1588
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 69/190 (36%), Gaps = 28/190 (14%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-------PCFLCGSFKHRWKNCKQ----------GQDC 466
C CG+ H A C + C+ CG H + C Q G C
Sbjct: 1372 ACHKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGGRGGGGSC 1431
Query: 467 FINKGSEHLASDCP--GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ---CY 521
+ S H+A +C G G C +CG+SGH C E CY
Sbjct: 1432 YKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGRGGGGGGTCY 1491
Query: 522 ICKSFGHLC--CVN---SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
C GH+ C SCY CG+SGH+ EC G+ CYKC
Sbjct: 1492 KCGESGHMARDCTQEGGGGGGRGGGGSCYKCGESGHMARECTQE-GGGGGRGGGGTCYKC 1550
Query: 577 GKEGHFARRC 586
G+ GH AR C
Sbjct: 1551 GESGHMAREC 1560
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 73/226 (32%), Gaps = 63/226 (27%)
Query: 424 TCSNCGKENHTAATCKMQ-------------KQNKPCFLCGSFKHRWKNCKQ-------- 462
C CG+ H A C + + C+ CG H + C Q
Sbjct: 1929 ACYKCGESGHMARECTQEGGGGRGGGGRGGGRGGGACYKCGESGHMARECTQEGGGGGGR 1988
Query: 463 -----GQDCFINKGSEHLASDCP----------GTDQGNNLSSNFCLRCGDSGHDLSSCE 507
G C+ S H+A +C G +G C +CG+SGH C
Sbjct: 1989 GGGRGGGACYKCGESGHMARECTQEGGGGGGWGGGGRGGGSGGGACYKCGESGHMARECT 2048
Query: 508 GEYHADDLKKIQ-----CYICKSFGHLC--CVN-------------SSIIGLKQVSCYNC 547
E + CY C GH+ C G +CY C
Sbjct: 2049 QEGGGGGGRGGGRGGGACYKCGESGHMARECTQEGGGGGGGGWGGGGRGGGSGGGACYKC 2108
Query: 548 GQSGHLGPECANSCEALNGKKSNLI-------CYKCGKEGHFARRC 586
G+SGH+ +C G CYKCG+ GHFAR C
Sbjct: 2109 GESGHMARDCTQEGGGGGGWGGGGRGGGSGGNCYKCGESGHFAREC 2154
>gi|430812110|emb|CCJ30446.1| unnamed protein product [Pneumocystis jirovecii]
Length = 197
Score = 66.6 bits (161), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 68/173 (39%), Gaps = 23/173 (13%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC-----KQGQDCFINKGSEHLASDC 479
C CG H A +C K ++ C+ C H C + C+ + H+ +DC
Sbjct: 6 CYKCGDLGHFADSCA--KTDRLCYNCKQPGHESNACPFPRTAERLQCYYCQSIGHIQADC 63
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEG------EYHADDLKKIQCYICKSFGHLCCVN 533
P SS C CG +GH SC G H + C+ C H
Sbjct: 64 PSFRINTAGSSGRCYSCGMTGHLARSCHGIPSAGTPIHFSAGRMQVCFKCGGPNHY---- 119
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ + V CY CG+ GH+ C NG +++ CY+CG H A+ C
Sbjct: 120 ARDCQAQSVKCYACGKYGHISSICE------NGSQTSKSCYRCGNLEHLAKDC 166
Score = 42.4 bits (98), Expect = 0.71, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSEHLASD 478
+ C CG NH A C Q Q+ C+ CG + H C+ G + C+ EHLA D
Sbjct: 108 QVCFKCGGPNHYARDC--QAQSVKCYACGKYGHISSICENGSQTSKSCYRCGNLEHLAKD 165
Query: 479 CPGTDQGNN 487
C NN
Sbjct: 166 CTTILSTNN 174
>gi|354488556|ref|XP_003506434.1| PREDICTED: cellular nucleic acid-binding protein-like [Cricetulus
griseus]
Length = 170
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 75/186 (40%), Gaps = 43/186 (23%)
Query: 421 NSETCSNCGKENHTA-------------------ATCKMQKQNKPCFLCGSFKHRWKNCK 461
+S+TC CG+ H A C Q+ C+ CG H K+C
Sbjct: 2 SSKTCFKCGRPGHWARECPKGGTRGRTPRSRGRGPQCSSASQSDICYRCGETGHYAKDCD 61
Query: 462 QGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
QD N G H+A DC T + C R GH C D ++ +C
Sbjct: 62 LLQDTCYNCGKRGHIAKDCTQTKREREQCCYICSR---PGHLARDC------DRQEEQKC 112
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
Y C FGH+ Q+ CY CG++GH+ C+ K S + CY+CG+ G
Sbjct: 113 YTCGEFGHI------QKDCTQIKCYRCGENGHMAVNCS--------KASEVSCYRCGEPG 158
Query: 581 HFARRC 586
H AR C
Sbjct: 159 HLAREC 164
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 23/113 (20%)
Query: 488 LSSNFCLRCGDSGHDLSSC--------------EGEYHADDLKKIQCYICKSFGHLCCVN 533
+SS C +CG GH C G + + CY C GH
Sbjct: 1 MSSKTCFKCGRPGHWARECPKGGTRGRTPRSRGRGPQCSSASQSDICYRCGETGHY---- 56
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L Q +CYNCG+ GH+ +C + ++ CY C + GH AR C
Sbjct: 57 AKDCDLLQDTCYNCGKRGHIAKDCTQT-----KREREQCCYICSRPGHLARDC 104
>gi|400594711|gb|EJP62544.1| cellular nucleic acid-binding protein [Beauveria bassiana ARSEF
2860]
Length = 179
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 83/179 (46%), Gaps = 28/179 (15%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSEHLASDC 479
C +CG H A C + K C+ CG+ H + C K+ + C+ HL+ +C
Sbjct: 16 ACYSCGNSGHQARDCPSKGPAK-CYNCGNEGHLSRECSEPMKENKSCYKCGQPGHLSREC 74
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCE-----GEYHA--DDLKKIQCYICKSFGHLC-- 530
P G N S C +CG+ GH C G Y A + CY C +GH+
Sbjct: 75 P--TAGGNGQSTECYKCGEMGHIARHCTKSSYGGSYGASYNGGAGKTCYSCGGYGHMSRE 132
Query: 531 CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
CVN G++ CYNCG+SGH +C E+ G+K ICYKC + GH C +N
Sbjct: 133 CVN----GMR---CYNCGESGHYSRDCPK--ESTGGEK---ICYKCQQSGHVQAACPNN 179
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
+D S C CG+SGH C +CY C + GHL +K+
Sbjct: 6 SDSAAAPSRGACYSCGNSGHQARDC------PSKGPAKCYNCGNEGHL--SRECSEPMKE 57
Query: 542 -VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
SCY CGQ GHL EC + G + CYKCG+ GH AR C
Sbjct: 58 NKSCYKCGQPGHLSRECPTA----GGNGQSTECYKCGEMGHIARHC 99
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 64/160 (40%), Gaps = 26/160 (16%)
Query: 416 DPPGWNSETCSNCGKENHTAATC-KMQKQNKPCFLCGSFKHRWKNCK------QGQDCFI 468
D P C NCG E H + C + K+NK C+ CG H + C Q +C+
Sbjct: 29 DCPSKGPAKCYNCGNEGHLSRECSEPMKENKSCYKCGQPGHLSRECPTAGGNGQSTECYK 88
Query: 469 NKGSEHLASDCPGTDQGNNLSSNF-------CLRCGDSGHDLSSCEGEYHADDLKKIQCY 521
H+A C + G + +++ C CG GH C + ++CY
Sbjct: 89 CGEMGHIARHCTKSSYGGSYGASYNGGAGKTCYSCGGYGHMSREC--------VNGMRCY 140
Query: 522 ICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
C GH C S G K CY C QSGH+ C N
Sbjct: 141 NCGESGHYSRDCPKESTGGEKI--CYKCQQSGHVQAACPN 178
>gi|301106623|ref|XP_002902394.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098268|gb|EEY56320.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 443
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 22/226 (9%)
Query: 368 IVGERQQKKRRKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSN 427
I+ + + R V K+ E+ +++NE+ +M + P YF + C +
Sbjct: 113 ILSDFSSRHRGNAGNVEVEKEITEEVQQQNESN-----KMQVGAPLYFVTD--LATKCFH 165
Query: 428 CGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNN 487
CG+ H A C K PC+ C H+ C C + H DC
Sbjct: 166 CGEVGHMATVCMNDKLQLPCYYCALRGHQAWECPN-LPCGNCRQLGHQERDC----DNRR 220
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNC 547
LS + C CG GH C+ + ++ ++ C +C GHL CV + V C NC
Sbjct: 221 LSIDPCGVCGRPGHIDVDCD---NVEEPAQVTCMVCTEVGHLHCVPIPPPADRSVYCPNC 277
Query: 548 GQS-------GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G++ +L P N ++ C+ C + GH A C
Sbjct: 278 GENHTLDRCDTYLEPTVTNFATRTASGRTVQTCFVCNEAGHIAAEC 323
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLA 476
PP S C NCG ENHT C + +F R + + Q CF+ + H+A
Sbjct: 266 PPADRSVYCPNCG-ENHTLDRCDTYLEPT----VTNFATRTASGRTVQTCFVCNEAGHIA 320
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
++CP G C +CG GH + C
Sbjct: 321 AECPVRSNGYTRGGGSCFKCGKPGHFAADC 350
>gi|340057210|emb|CCC51552.1| putative universal minicircle sequence binding protein (UMSBP)
[Trypanosoma vivax Y486]
Length = 138
Score = 65.9 bits (159), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 464 QDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYIC 523
+ C+ H++ +CPG GN C CG GH C G CY C
Sbjct: 11 RSCYNCGQPGHISRECPGARSGN-ADGRACYNCGQPGHISRDCPGMRGGSSFGGRSCYNC 69
Query: 524 KSFGHL---CCVNSSIIGLKQV-SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
GH+ C G Q SCY+C Q GH+ +C N+ A + CY CG+
Sbjct: 70 GKVGHISRDCPTARGAYGGPQTRSCYHCQQEGHIARDCPNA-PADGAVRGGGACYNCGQP 128
Query: 580 GHFARRC 586
GH +R C
Sbjct: 129 GHISRAC 135
Score = 47.8 bits (112), Expect = 0.020, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC-----GSNFKDR 593
SCYNCGQ GH+ EC A +G CY CG+ GH +R C GS+F R
Sbjct: 12 SCYNCGQPGHISRECPG---ARSGNADGRACYNCGQPGHISRDCPGMRGGSSFGGR 64
Score = 39.7 bits (91), Expect = 5.4, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQK-----QNKPCFLCGSFKHRWKNC---------KQGQDC 466
+ C NCG+ H + C + + C+ CG H ++C Q + C
Sbjct: 35 DGRACYNCGQPGHISRDCPGMRGGSSFGGRSCYNCGKVGHISRDCPTARGAYGGPQTRSC 94
Query: 467 FINKGSEHLASDCPGTD-QGNNLSSNFCLRCGDSGHDLSSC 506
+ + H+A DCP G C CG GH +C
Sbjct: 95 YHCQQEGHIARDCPNAPADGAVRGGGACYNCGQPGHISRAC 135
>gi|338714530|ref|XP_003363102.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
Length = 172
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 42/164 (25%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q+ K C+ CG H K+CK+ P
Sbjct: 45 DICYRCGESGHLAKDCDLQEDGKSCYNCGRGGHIAKDCKE-----------------PKR 87
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 88 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 130
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 131 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 166
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG SGH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESGHL--A 57
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ SCYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 58 KDCDLQEDGKSCYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 106
>gi|385301300|gb|EIF45501.1| zinc knuckle domain protein [Dekkera bruxellensis AWRI1499]
Length = 189
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSE 473
+ TC CG H A C + + C+ C S H K+C + CF
Sbjct: 2 AFFPRTCYKCGLTGHKAEDC--PQTQRLCYNCRSPDHEAKDCPLPKQTNTKQCFNCGKIG 59
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H+ S+CP C CG GH C E ++ KI CY C F HL
Sbjct: 60 HIRSECPEPPHRQVK----CYNCGKFGHVAKDCYAEKRSE---KIVCYNCGGFNHL---- 108
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ V CYNCG++GHL C + K +C+KCG+EGH AR C
Sbjct: 109 AKDCRADPVKCYNCGETGHLAKFC-------HSKSKAKVCFKCGEEGHLARFC 154
>gi|401420036|ref|XP_003874507.1| universal minicircle sequence binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490743|emb|CBZ26007.1| universal minicircle sequence binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 182
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ CP ++ C CG++GH C E K CY C S
Sbjct: 73 CYKCGEAGHMSRSCP-----RAAATRSCYNCGETGHMSRDCPSER-----KPKSCYNCGS 122
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G SCYNCG +GH+ +C N ++ CY CG H +
Sbjct: 123 TEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPN-------ERKPKSCYNCGSTEHLS 175
Query: 584 RRC 586
R C
Sbjct: 176 REC 178
Score = 60.1 bits (144), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 14/108 (12%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCY 545
+S+ C +CG++GH SC CY C GH+ C + K SCY
Sbjct: 68 MSAITCYKCGEAGHMSRSCPRAAATR-----SCYNCGETGHMSRDCPSER----KPKSCY 118
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
NCG + HL EC N +A +S CY CG GH +R C + K +
Sbjct: 119 NCGSTEHLSRECTNEAKAGADTRS---CYNCGGTGHMSRDCPNERKPK 163
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 53/138 (38%), Gaps = 31/138 (22%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTD 483
TC CG+ H + +C + C+ CG + H++ DCP
Sbjct: 72 TCYKCGEAGHMSRSCPRAAATRSCYNCGE-------------------TGHMSRDCPSER 112
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQ 541
+ + C CG + H C E A + CY C GH+ C N K
Sbjct: 113 KPKS-----CYNCGSTEHLSRECTNEAKAGADTR-SCYNCGGTGHMSRDCPNER----KP 162
Query: 542 VSCYNCGQSGHLGPECAN 559
SCYNCG + HL EC +
Sbjct: 163 KSCYNCGSTEHLSRECPD 180
Score = 53.9 bits (128), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQD---CFIN 469
P + +C NCG+ H + C +++ K C+ CGS +H + C K G D C+
Sbjct: 87 PRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTEHLSRECTNEAKAGADTRSCYNC 146
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
G+ H++ DCP N C CG + H C
Sbjct: 147 GGTGHMSRDCP-----NERKPKSCYNCGSTEHLSREC 178
Score = 40.0 bits (92), Expect = 3.6, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 417 PPGWNSETCSNCGKENHTAATC----KMQKQNKPCFLCGSFKHRWKNC---KQGQDCFIN 469
P ++C NCG H + C K + C+ CG H ++C ++ + C+
Sbjct: 109 PSERKPKSCYNCGSTEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYNC 168
Query: 470 KGSEHLASDCP 480
+EHL+ +CP
Sbjct: 169 GSTEHLSRECP 179
>gi|50550507|ref|XP_502726.1| YALI0D12056p [Yarrowia lipolytica]
gi|49648594|emb|CAG80914.1| YALI0D12056p [Yarrowia lipolytica CLIB122]
Length = 197
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 74/180 (41%), Gaps = 28/180 (15%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLA- 476
P + C NCG + H + C + + K CF C H K C Q D ++ G+ +A
Sbjct: 29 PRVGNPVCYNCGNDGHMSRDCTEEPKEKACFKCNQPGHILKECPQ-NDAIVHDGAAPVAP 87
Query: 477 -SDCP-----GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI----QCYICKSF 526
+ P G +G S C +CG GH +C K CY C
Sbjct: 88 NGEAPIGGEFGAPRG---PSGVCYKCGKPGHFARACRSVPAGGAPPKFGRTQSCYSCGGQ 144
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GHL +G K CYNCG GH+ EC G+ + +CY C K GH A +C
Sbjct: 145 GHL--SKDCTVGQK---CYNCGSMGHVSKEC--------GEAQSRVCYNCKKPGHIAIKC 191
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 28/117 (23%)
Query: 490 SNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQ 549
S C CG+ GH + +C + CY C + GH+ K+ +C+ C Q
Sbjct: 12 SRTCFNCGEFGHQVRACP------RVGNPVCYNCGNDGHM--SRDCTEEPKEKACFKCNQ 63
Query: 550 SGHLGPEC--------------ANSCEALNG------KKSNLICYKCGKEGHFARRC 586
GH+ EC A + EA G + + +CYKCGK GHFAR C
Sbjct: 64 PGHILKECPQNDAIVHDGAAPVAPNGEAPIGGEFGAPRGPSGVCYKCGKPGHFARAC 120
>gi|402910570|ref|XP_003917942.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Papio anubis]
Length = 170
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 438 CKMQKQNKPCFLCGSFKHRWKNCKQ-GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRC 496
C + C+ CG F H KNC G C+ S H+A DC + N C C
Sbjct: 38 CSSTTLSYTCYRCGEFGHHAKNCVLLGNICYNCGRSGHIAKDCKEPKRERN---QHCYTC 94
Query: 497 GDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPE 556
G GH Y D K+ +CY C GH+ QV CY CG++GH+
Sbjct: 95 GRLGHL------AYDCDRQKEQKCYSCGKLGHI------QKDCAQVKCYRCGETGHVAIN 142
Query: 557 CANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
C+ K S + CY+CG+ GH AR C S
Sbjct: 143 CS--------KASQVNCYRCGESGHLARECPS 166
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ-----GQDCFINKGSEHLA 476
S TC CG+ H A C + C+ CG H K+CK+ Q C+ HLA
Sbjct: 44 SYTCYRCGEFGHHAKNCVLL--GNICYNCGRSGHIAKDCKEPKRERNQHCYTCGRLGHLA 101
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DC + C CG GH D +++CY C GH+ +N S
Sbjct: 102 YDC------DRQKEQKCYSCGKLGHI---------QKDCAQVKCYRCGETGHVA-INCSK 145
Query: 537 IGLKQVSCYNCGQSGHLGPEC 557
QV+CY CG+SGHL EC
Sbjct: 146 A--SQVNCYRCGESGHLAREC 164
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C QK+ K C+ CG H K+C Q C+ + H+A +C
Sbjct: 89 QHCYTCGRLGHLAYDCDRQKEQK-CYSCGKLGHIQKDCAQ-VKCYRCGETGHVAINCSKA 146
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGE 509
Q N C RCG+SGH C E
Sbjct: 147 SQVN------CYRCGESGHLARECPSE 167
>gi|158257670|dbj|BAF84808.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 42/164 (25%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q+ + C+ CG H K+CK+ P
Sbjct: 52 DICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKE-----------------PKR 94
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 95 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 137
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 138 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 173
>gi|403291696|ref|XP_003936912.1| PREDICTED: cellular nucleic acid-binding protein-like [Saimiri
boliviensis boliviensis]
Length = 169
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 63/142 (44%), Gaps = 23/142 (16%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C+ CG H+ KNC G C+ S H+A DC ++ C CG GH C
Sbjct: 47 CYRCGESGHQAKNCVLGNICYNCGRSGHIAKDC---NEPKRERDQCCYTCGRPGHLACDC 103
Query: 507 EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNG 566
D K+ +CY C GH+ +V CY CG++GH+ C+
Sbjct: 104 ------DRQKEQKCYACGQLGHI------QKDCAKVKCYRCGETGHMAISCS-------- 143
Query: 567 KKSNLICYKCGKEGHFARRCGS 588
K + CY+CGK GH AR C S
Sbjct: 144 KAIQVNCYRCGKPGHLARECPS 165
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 54/135 (40%), Gaps = 39/135 (28%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NCG+ H A C K +++ C+ CG + G HLA DC
Sbjct: 66 CYNCGRSGHIAKDCNEPKRERDQCCYTCG---------RPG----------HLACDC--- 103
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
+ C CG GH D K++CY C GH+ S I QV
Sbjct: 104 ---DRQKEQKCYACGQLGHI---------QKDCAKVKCYRCGETGHMAISCSKAI---QV 148
Query: 543 SCYNCGQSGHLGPEC 557
+CY CG+ GHL EC
Sbjct: 149 NCYRCGKPGHLAREC 163
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C QK+ K C+ CG H K+C + + C+ + H+A C
Sbjct: 88 QCCYTCGRPGHLACDCDRQKEQK-CYACGQLGHIQKDCAKVK-CYRCGETGHMAISCSKA 145
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGE 509
Q N C RCG GH C E
Sbjct: 146 IQVN------CYRCGKPGHLARECPSE 166
>gi|187608726|ref|NP_001120664.1| cellular nucleic acid-binding protein isoform 1 [Homo sapiens]
gi|291393354|ref|XP_002713209.1| PREDICTED: zinc finger protein 9 isoform 1 [Oryctolagus cuniculus]
gi|355564532|gb|EHH21032.1| hypothetical protein EGK_04008 [Macaca mulatta]
gi|355786375|gb|EHH66558.1| hypothetical protein EGM_03574 [Macaca fascicularis]
Length = 179
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 42/164 (25%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q+ + C+ CG H K+CK+ P
Sbjct: 52 DICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKE-----------------PKR 94
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 95 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 137
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 138 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 173
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 30/121 (24%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG----------------------EYHADDLKKIQCYICKS 525
+SSN C +CG SGH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI-CYRCGE 59
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
GHL + +CYNCG+ GH+ +C ++ CY CGK GH AR
Sbjct: 60 SGHL--AKDCDLQEDVEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARD 112
Query: 586 C 586
C
Sbjct: 113 C 113
>gi|408387760|gb|EKJ67470.1| hypothetical protein FPSE_12389 [Fusarium pseudograminearum CS3096]
Length = 180
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 83/181 (45%), Gaps = 30/181 (16%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSEHLASDC 479
C +CG H A C + K C+ CG H ++C K + C+ H++ DC
Sbjct: 15 ACYSCGSTAHQARDCPTKGPAK-CYNCGGEGHMSRDCTEPMKDNKSCYKCGQPGHISRDC 73
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ---------CYICKSFGHLC 530
P + G + + C +CG+ GH +C + ++ CY C FGH+
Sbjct: 74 PMS--GGSGQATECYKCGEIGHIARNCNKSSYGNNYGGGFQQQGGAGKTCYSCGGFGHMS 131
Query: 531 --CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
CVN G+K CYNCG+SGH +C E+ G+K ICYKC + GH +C
Sbjct: 132 RECVN----GMK---CYNCGESGHYSRDCPK--ESAGGEK---ICYKCQQPGHVQSQCPG 179
Query: 589 N 589
N
Sbjct: 180 N 180
>gi|58004799|gb|AAW62459.1| cellular nucleic acid binding protein mutant delta-RGG [synthetic
construct]
Length = 162
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----------CFLCGSFKHRWKNCKQGQDCFIN 469
+S C CG+ H A C ++ C+ CG H K+C +D N
Sbjct: 2 SSNECFKCGRTGHWARECPTFSSSRGFQFISSSLPDICYRCGESGHLAKDCDLQEDACYN 61
Query: 470 KG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
G H+A DC + C CG GH CE HAD+ K CY C FGH
Sbjct: 62 CGRGGHIAKDC---KEPRKEREQCCYNCGKPGHLARDCE---HADEQK---CYSCGEFGH 112
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +V CY CG +GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 113 I------QKDCTKVKCYRCGDTGHVAINCS--------KTSEVNCYRCGESGHLAREC 156
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 17/106 (16%)
Query: 488 LSSNFCLRCGDSGH------DLSSCEG-EYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+SSN C +CG +GH SS G ++ + L I CY C GHL + L+
Sbjct: 1 MSSNECFKCGRTGHWARECPTFSSSRGFQFISSSLPDI-CYRCGESGHL----AKDCDLQ 55
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +CYNCG+ GH+ +C K+ CY CGK GH AR C
Sbjct: 56 EDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGHLARDC 96
>gi|325183159|emb|CCA17617.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 461
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 76/201 (37%), Gaps = 19/201 (9%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPG 481
S C NCG+ H + C K KPC+ CG H C + C H+ S C
Sbjct: 193 STKCFNCGQTGHLSNACTNTKLLKPCYFCGISGHNSYACPR-TPCGSCLQIGHITSRC-- 249
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
++ N C CG GH SC + + D+K I+C +C GH C ++
Sbjct: 250 --SNRSIQLNNCKVCGRIGHTEESC--QLKSKDVKAIKCMVCMKTGHSHCTPLPQPSDRR 305
Query: 542 VSCYNCGQSGHLGPECANSCEAL-------NGKKSNLICYKCGKEGHFARRCGSNFKDR- 593
+ C NC H C N E + + SN+ C+ C GH A C R
Sbjct: 306 LFCPNCA-GNHRLKRCRNQREGIRLSDVIPSFSSSNVKCFLCNHMGHIAAECSHRKSTRD 364
Query: 594 ---LRISDLLFTAERPPTRAR 611
R D A P AR
Sbjct: 365 GACFRCDDYGHMANACPEFAR 385
>gi|198428176|ref|XP_002131221.1| PREDICTED: similar to universal minicircle sequence binding protein
(UMSBP), putative isoform 1 [Ciona intestinalis]
Length = 299
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 74/191 (38%), Gaps = 48/191 (25%)
Query: 421 NSETCSNCGKENHTAATCKM----------------QKQNKPCFLCGSFKHRWKNCKQGQ 464
+++ C CG H A C ++ N CF CG H ++C +
Sbjct: 108 DADVCYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSAE 167
Query: 465 DCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI----- 518
+ N E HLA DCP N C +CG +GH C + + ++
Sbjct: 168 NACYNCYKEGHLARDCP--------EDNACYKCGKAGHLARKCPEDADRNGDARLNRREA 219
Query: 519 ---QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
QCY+C++ GH+ + +CY C GH+ +C N N CY
Sbjct: 220 GTKQCYLCQNVGHI------QANCPEATCYRCHGEGHIARDCPNG---------NEECYN 264
Query: 576 CGKEGHFARRC 586
C + GH AR C
Sbjct: 265 CRRPGHKARDC 275
>gi|187608738|ref|NP_001120666.1| cellular nucleic acid-binding protein isoform 4 [Homo sapiens]
gi|291393356|ref|XP_002713210.1| PREDICTED: zinc finger protein 9 isoform 2 [Oryctolagus cuniculus]
gi|68359783|gb|AAY96755.1| cellular nucleic acid binding protein beta variant 2 [Homo sapiens]
Length = 172
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 42/164 (25%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q+ + C+ CG H K+CK+ P
Sbjct: 45 DICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKE-----------------PKR 87
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 88 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 130
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 131 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 166
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG SGH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESGHL--A 57
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 58 KDCDLQEDVEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 106
>gi|148666815|gb|EDK99231.1| cellular nucleic acid binding protein, isoform CRA_d [Mus musculus]
Length = 204
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 81 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 137
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 138 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 178
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 179 -KTSEVNCYRCGESGHLAREC 198
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 79 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 136
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 137 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 180
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 181 --SEVNCYRCGESGHLAREC 198
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG SGH C ++ + L I CY C GHL
Sbjct: 35 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESGHL--- 90
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 91 -AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 138
>gi|320580572|gb|EFW94794.1| zinc finger protein, putative [Ogataea parapolymorpha DL-1]
Length = 390
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H C++ + C+ K H + DCP Q + C C +GH S
Sbjct: 234 CYKCGQVGHFADACQETERLCYNCKQPGHESGDCPEPKQ---TTQKQCYNCKQTGHVQSE 290
Query: 506 CEGEYHADDLKKI-QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEAL 564
C ++ L+ + +CY C GHL S+ G +V+C+ CG H +C
Sbjct: 291 C-----SEPLRPVSKCYNCGKIGHLAKGCSAARGGPKVTCHKCGGLNHFARDC------- 338
Query: 565 NGKKSNLI-CYKCGKEGHFARRC-----GSNF 590
+S ++ CY CGK GH ++ C GSNF
Sbjct: 339 ---QSGVVKCYACGKTGHISKDCTSASGGSNF 367
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-----CFINKGSEHLASD 478
TC CG+ H A C Q+ + C+ C H +C + + C+ K + H+ S+
Sbjct: 233 TCYKCGQVGHFADAC--QETERLCYNCKQPGHESGDCPEPKQTTQKQCYNCKQTGHVQSE 290
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
C ++ +S C CG GH C A K+ C+ C H S +
Sbjct: 291 C--SEPLRPVSK--CYNCGKIGHLAKGCSA---ARGGPKVTCHKCGGLNHFARDCQSGV- 342
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNL-ICYKCGKEGHFARRC 586
V CY CG++GH+ +C + A G N CYKCG+ GH ++ C
Sbjct: 343 ---VKCYACGKTGHISKDCTS---ASGGSNFNAKTCYKCGESGHISKFC 385
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 425 CSNCGKENHTAATCKMQKQNK--PCFLCGSFKHRWKNCKQGQ-DCFINKGSEHLASDCPG 481
C NCGK H A C + C CG H ++C+ G C+ + H++ DC
Sbjct: 301 CYNCGKIGHLAKGCSAARGGPKVTCHKCGGLNHFARDCQSGVVKCYACGKTGHISKDCTS 360
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCE 507
G+N ++ C +CG+SGH CE
Sbjct: 361 ASGGSNFNAKTCYKCGESGHISKFCE 386
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 15/121 (12%)
Query: 416 DPPGWNSETCSNCGKENHTAATCK--MQKQNKPCFLCGSFKHRWKNCKQGQ-----DCFI 468
+P + C NC + H + C ++ +K C+ CG H K C + C
Sbjct: 269 EPKQTTQKQCYNCKQTGHVQSECSEPLRPVSK-CYNCGKIGHLAKGCSAARGGPKVTCHK 327
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
G H A DC Q + C CG +GH C + CY C GH
Sbjct: 328 CGGLNHFARDC----QSGVVK---CYACGKTGHISKDCTSASGGSNFNAKTCYKCGESGH 380
Query: 529 L 529
+
Sbjct: 381 I 381
>gi|291393360|ref|XP_002713212.1| PREDICTED: zinc finger protein 9 isoform 4 [Oryctolagus cuniculus]
gi|296225970|ref|XP_002758718.1| PREDICTED: cellular nucleic acid-binding protein isoform 3
[Callithrix jacchus]
gi|332261813|ref|XP_003279961.1| PREDICTED: cellular nucleic acid-binding protein isoform 5
[Nomascus leucogenys]
gi|338714532|ref|XP_003363103.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|397518586|ref|XP_003829465.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Pan
paniscus]
gi|402887093|ref|XP_003906939.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037477|ref|XP_003950236.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951820|ref|XP_003982591.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Felis
catus]
gi|194389826|dbj|BAG60429.1| unnamed protein product [Homo sapiens]
Length = 160
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 73/176 (41%), Gaps = 33/176 (18%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP---------CFLCGSFKHRWKNCKQGQDCFINKG 471
+S C CG+ H A C C+ CG H K+C +D N G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDACYNCG 61
Query: 472 -SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC 530
H+A DC + C CG GH C+ HAD+ K CY C FGH+
Sbjct: 62 RGGHIAKDCK---EPKREREQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI- 111
Query: 531 CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+V CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 112 -----QKDCTKVKCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 154
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ----CYICKSFGHLCCVNSSIIGLKQVS 543
+SSN C +CG SGH C + + CY C GHL + L++ +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHL----AKDCDLQEDA 56
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 CYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 94
>gi|392343296|ref|XP_003754844.1| PREDICTED: cellular nucleic acid-binding protein-like [Rattus
norvegicus]
gi|392355786|ref|XP_003752133.1| PREDICTED: cellular nucleic acid-binding protein-like [Rattus
norvegicus]
gi|149055591|gb|EDM07175.1| rCG38105 [Rattus norvegicus]
Length = 170
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 24/150 (16%)
Query: 438 CKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRC 496
C Q+ C+ CG H K+C QD N G H+A DC Q C C
Sbjct: 38 CSSASQSDVCYRCGETGHYAKDCDLLQDTCYNCGRRGHIAKDCT---QAKREREQCCYIC 94
Query: 497 GDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPE 556
GH C D ++ +CY C FGH+ Q+ CY CG++GH+
Sbjct: 95 SRPGHLARDC------DRQEEQKCYTCGEFGHI------QKDCTQIKCYRCGENGHMAVN 142
Query: 557 CANSCEALNGKKSNLICYKCGKEGHFARRC 586
C+ K S + CY+CG+ GH AR C
Sbjct: 143 CS--------KASEVSCYRCGESGHLAREC 164
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 63/142 (44%), Gaps = 25/142 (17%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHL 475
S+ C CG+ H A C + + C+ CG H K+C Q Q C+I HL
Sbjct: 43 QSDVCYRCGETGHYAKDCDLLQDT--CYNCGRRGHIAKDCTQAKREREQCCYICSRPGHL 100
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
A DC + C CG+ GH D +I+CY C GH+ VN S
Sbjct: 101 ARDC------DRQEEQKCYTCGEFGHI---------QKDCTQIKCYRCGENGHMA-VNCS 144
Query: 536 IIGLKQVSCYNCGQSGHLGPEC 557
+VSCY CG+SGHL EC
Sbjct: 145 --KASEVSCYRCGESGHLAREC 164
>gi|109131255|ref|XP_001096279.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Macaca mulatta]
gi|355757474|gb|EHH60999.1| Zinc finger CCHC domain-containing protein 13 [Macaca fascicularis]
Length = 170
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 66/145 (45%), Gaps = 28/145 (19%)
Query: 447 CFLCGSFKHRWKNCKQ-GQDCFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG F H KNC G C+ S H+A DC P ++ + C CG GH
Sbjct: 47 CYRCGEFGHHAKNCVLLGNICYNCGRSGHIAKDCKEPKRERDQH-----CYTCGRLGHLA 101
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C D K+ +CY C GH+ QV CY CG++GH+ C+
Sbjct: 102 CDC------DHQKEQKCYSCGKLGHI------QKDCAQVKCYRCGETGHVAINCS----- 144
Query: 564 LNGKKSNLICYKCGKEGHFARRCGS 588
K S + CY+CG+ GH AR C S
Sbjct: 145 ---KASQVNCYRCGESGHLARECPS 166
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 62/141 (43%), Gaps = 25/141 (17%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ-----GQDCFINKGSEHLA 476
S TC CG+ H A C + C+ CG H K+CK+ Q C+ HLA
Sbjct: 44 SYTCYRCGEFGHHAKNCVLL--GNICYNCGRSGHIAKDCKEPKRERDQHCYTCGRLGHLA 101
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DC ++ C CG GH D +++CY C GH+ +N S
Sbjct: 102 CDC------DHQKEQKCYSCGKLGHI---------QKDCAQVKCYRCGETGHVA-INCSK 145
Query: 537 IGLKQVSCYNCGQSGHLGPEC 557
QV+CY CG+SGHL EC
Sbjct: 146 A--SQVNCYRCGESGHLAREC 164
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C QK+ K C+ CG H K+C Q C+ + H+A +C
Sbjct: 89 QHCYTCGRLGHLACDCDHQKEQK-CYSCGKLGHIQKDCAQ-VKCYRCGETGHVAINCSKA 146
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGE 509
Q N C RCG+SGH C E
Sbjct: 147 SQVN------CYRCGESGHLARECPSE 167
>gi|449446157|ref|XP_004140838.1| PREDICTED: uncharacterized protein LOC101212555 [Cucumis sativus]
Length = 396
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 68/160 (42%), Gaps = 16/160 (10%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K G+ CFI K ++H+A CP Q + CL C GH L +C + KK+ C
Sbjct: 73 KPGESCFICKANDHIAKLCPEKAQWEK--NKICLLCRRRGHSLKNCPDKNEGTVDKKL-C 129
Query: 521 YICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
Y C GH C G K SC+ C +SGHL C + + K C CG
Sbjct: 130 YNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKGG--CCKTCG 187
Query: 578 KEGHFARRC---GSNFKDR-----LRISDLLFTAERPPTR 609
+ H A+ C G+ DR R S + RP T+
Sbjct: 188 EVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETK 227
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 56/141 (39%), Gaps = 26/141 (18%)
Query: 423 ETCSNCGKENHTAATCKMQKQ---NKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
E+C C +H A C + Q NK C LC H KNC
Sbjct: 76 ESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNC------------------- 116
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSI 536
P ++G + C CG++GH L++C K C+IC GHL C N+
Sbjct: 117 PDKNEGT-VDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHG 175
Query: 537 IGLKQVSCYNCGQSGHLGPEC 557
I K C CG+ HL +C
Sbjct: 176 IYPKGGCCKTCGEVTHLAKDC 196
>gi|125549296|gb|EAY95118.1| hypothetical protein OsI_16935 [Oryza sativa Indica Group]
Length = 403
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 56/143 (39%), Gaps = 27/143 (18%)
Query: 423 ETCSNCGKENHTAATCK---MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
E C C +H A C + ++NK C LC H KNC +K E+L
Sbjct: 70 ERCFICKATDHVAKVCPEKSLWEKNKICLLCRQRGHSLKNCP-------DKNDENL---- 118
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSI 536
FC CG+SGH LS C K C++CK GHL C N
Sbjct: 119 ----------KKFCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHG 168
Query: 537 IGLKQVSCYNCGQSGHLGPECAN 559
I K C CG+ HL C N
Sbjct: 169 IYPKGGCCKICGEVTHLAKHCPN 191
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 30/129 (23%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
+ G+ CFI K ++H+A CP ++ + CL C GH L +C + + ++LKK
Sbjct: 67 RPGERCFICKATDHVAKVCP--EKSLWEKNKICLLCRQRGHSLKNCP-DKNDENLKKF-- 121
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
CYNCG+SGH +C E NG C+ C ++G
Sbjct: 122 -----------------------CYNCGESGHSLSKCPKPIE--NGGTKFASCFVCKQQG 156
Query: 581 HFARRCGSN 589
H ++ C N
Sbjct: 157 HLSKNCPEN 165
>gi|432090075|gb|ELK23671.1| Cellular nucleic acid-binding protein [Myotis davidii]
Length = 142
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 19 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 75
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 76 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 116
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 117 -KTSEVNCYRCGESGHLAREC 136
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 17 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 74
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 75 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 118
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 119 --SEVNCYRCGESGHLAREC 136
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 54 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 111
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGH 501
A +C T + N C RCG+SGH
Sbjct: 112 AINCSKTSEVN------CYRCGESGH 131
>gi|417396563|gb|JAA45315.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 178
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 43/165 (26%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPG 481
S+ C CG+ H A C +Q +++ C+ CG H K+CK+ P
Sbjct: 51 SDICYRCGESGHLAKDCDLQ-EDEACYNCGRGGHIAKDCKE-----------------PK 92
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
++ C CG GH C+ HAD+ K CY C FGH+ +
Sbjct: 93 RER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTK 135
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
V CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 136 VKCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 172
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK H A C + K C+ CG F
Sbjct: 70 QEDEACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 127
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 128 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGH 167
>gi|222629337|gb|EEE61469.1| hypothetical protein OsJ_15732 [Oryza sativa Japonica Group]
Length = 403
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 56/143 (39%), Gaps = 27/143 (18%)
Query: 423 ETCSNCGKENHTAATCK---MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
E C C +H A C + ++NK C LC H KNC +K E+L
Sbjct: 70 ERCFICKAADHVAKVCPEKSLWEKNKICLLCRQRGHSLKNCP-------DKNDENL---- 118
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSI 536
FC CG+SGH LS C K C++CK GHL C N
Sbjct: 119 ----------KKFCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHG 168
Query: 537 IGLKQVSCYNCGQSGHLGPECAN 559
I K C CG+ HL C N
Sbjct: 169 IYPKGGCCKICGEVTHLAKHCPN 191
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 30/129 (23%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
+ G+ CFI K ++H+A CP ++ + CL C GH L +C + + ++LKK
Sbjct: 67 RPGERCFICKAADHVAKVCP--EKSLWEKNKICLLCRQRGHSLKNCP-DKNDENLKKF-- 121
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
CYNCG+SGH +C E NG C+ C ++G
Sbjct: 122 -----------------------CYNCGESGHSLSKCPKPIE--NGGTKFASCFVCKQQG 156
Query: 581 HFARRCGSN 589
H ++ C N
Sbjct: 157 HLSKNCPEN 165
>gi|58004792|gb|AAW62457.1| cellular nucleic acid binding protein mutant 2-7 [synthetic
construct]
Length = 128
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 5 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPRKEREQCCYNCGKPGHLARD 61
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
CE HAD+ K CY C FGH+ +V CY CG +GH+ C+
Sbjct: 62 CE---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGDTGHVAINCS------- 102
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 103 -KTSEVNCYRCGESGHLAREC 122
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 3 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLAR 60
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 61 DCEHADE------QKCYSCGEFGHIQK---------DCTKVKCYRCGDTGHVA-INCSKT 104
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 105 --SEVNCYRCGESGHLAREC 122
>gi|449485612|ref|XP_004157224.1| PREDICTED: uncharacterized LOC101212555 [Cucumis sativus]
Length = 396
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 68/160 (42%), Gaps = 16/160 (10%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K G+ CFI K ++H+A CP Q + CL C GH L +C + KK+ C
Sbjct: 73 KPGESCFICKANDHIAKLCPEKAQWEK--NKICLLCRRRGHSLKNCPDKNEGTVDKKL-C 129
Query: 521 YICKSFGHLCCVNSSII---GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
Y C GH S + G K SC+ C + GHL C + + K C CG
Sbjct: 130 YNCGETGHSLANCSQPLQDGGTKFASCFICNEGGHLSKNCPKNTHGIYPKGG--CCKTCG 187
Query: 578 KEGHFARRC---GSNFKDR-----LRISDLLFTAERPPTR 609
+ H A+ C G+ DR R S + RP T+
Sbjct: 188 EVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETK 227
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 56/141 (39%), Gaps = 26/141 (18%)
Query: 423 ETCSNCGKENHTAATCKMQKQ---NKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
E+C C +H A C + Q NK C LC H KNC
Sbjct: 76 ESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNC------------------- 116
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSI 536
P ++G + C CG++GH L++C K C+IC GHL C N+
Sbjct: 117 PDKNEGT-VDKKLCYNCGETGHSLANCSQPLQDGGTKFASCFICNEGGHLSKNCPKNTHG 175
Query: 537 IGLKQVSCYNCGQSGHLGPEC 557
I K C CG+ HL +C
Sbjct: 176 IYPKGGCCKTCGEVTHLAKDC 196
>gi|410899915|ref|XP_003963442.1| PREDICTED: cellular nucleic acid-binding protein-like [Takifugu
rubripes]
Length = 167
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 67/144 (46%), Gaps = 30/144 (20%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H ++C Q +D C+ S H++ DC + + C CG +GH
Sbjct: 44 CYRCGEHGHIARDCDQPEDSCYNCHKSGHISRDCK---EPKREREHLCYNCGKAGHVARD 100
Query: 506 CEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCE 562
CE HA++ K CY C FGH LC +V CY CG+ GH+ +C+
Sbjct: 101 CE---HANEQK---CYSCGEFGHIQKLC---------DKVKCYRCGEIGHVAVQCS---- 141
Query: 563 ALNGKKSNLICYKCGKEGHFARRC 586
K S CY CGK GH AR C
Sbjct: 142 ----KASETNCYNCGKAGHVARDC 161
>gi|45382487|ref|NP_990238.1| cellular nucleic acid-binding protein [Gallus gallus]
gi|6225175|sp|O42395.1|CNBP_CHICK RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|2232217|gb|AAB62243.1| cellular nucleic acid binding protein [Gallus gallus]
Length = 172
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q ++K C+ CG H K+CK+ P
Sbjct: 46 DICYRCGESGHLAKDCDLQ-EDKACYNCGRGGHIAKDCKE-----------------PKR 87
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 88 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 130
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 131 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 166
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG----------------EYHADDLKKIQCYICKSFGHLCC 531
+SSN C +CG +GH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDI-CYRCGESGHL-- 57
Query: 532 VNSSIIGLKQ-VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 58 --AKDCDLQEDKACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 106
>gi|19114592|ref|NP_593680.1| zinc finger protein Byr3 [Schizosaccharomyces pombe 972h-]
gi|543908|sp|P36627.1|BYR3_SCHPO RecName: Full=Cellular nucleic acid-binding protein homolog
gi|254734|gb|AAB23116.1| human cellular nucleic acid binding protein (CNBP) homolog
[Schizosaccharomyces pombe]
gi|1204164|emb|CAA93542.1| zinc finger protein Byr3 [Schizosaccharomyces pombe]
Length = 179
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 73/173 (42%), Gaps = 26/173 (15%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD---CFINKGSEHLASDCPG 481
C NCG+ H A C + C+ C H+ C + Q C+ + HL DCP
Sbjct: 19 CYNCGENGHQAREC---TKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPS 75
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSC------EGEYHADDLKKIQCYICKSFGHLCCVNSS 535
+ N C +CG GH C G + CY C S+GH
Sbjct: 76 SP--NPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQ--ARDC 131
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+G+K CY+CG+ GH EC +A +G+ +CYKC + GH A C S
Sbjct: 132 TMGVK---CYSCGKIGHRSFECQ---QASDGQ----LCYKCNQPGHIAVNCTS 174
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CG++GH C K CY C GH + ++ +CY CG +GH
Sbjct: 19 CYNCGENGHQAREC--------TKGSICYNCNQTGHK--ASECTEPQQEKTCYACGTAGH 68
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
L +C +S G + CYKCG+ GH AR C +N
Sbjct: 69 LVRDCPSSPNPRQGAE----CYKCGRVGHIARDCRTN 101
>gi|4929293|gb|AAD33937.1|AF144698_1 cellular nucleic acid binding protein [Rhinella arenarum]
Length = 178
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPRKEREQCCYNCGKPGHLARD 111
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
CE HAD+ K CY C FGH+ +V CY CG +GH+ C+
Sbjct: 112 CE---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGDTGHVAINCS------- 152
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 153 -KTSEVNCYRCGESGHLAREC 172
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 53 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLAR 110
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 111 DCEHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGDTGHVA-INCSKT 154
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 155 --SEVNCYRCGESGHLAREC 172
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----------------------EGEYHADDLKKIQCYICK 524
+SSN C +CG +GH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDI-CYRCG 59
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GHL + L++ +CYNCG+ GH+ +C K+ CY CGK GH AR
Sbjct: 60 ESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGHLAR 110
Query: 585 RC 586
C
Sbjct: 111 DC 112
>gi|395863010|ref|XP_003803706.1| PREDICTED: cellular nucleic acid-binding protein-like [Otolemur
garnettii]
Length = 170
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H KNC +D N G S H+A DC ++ C CG GH
Sbjct: 47 CYRCGESGHHAKNCDLLEDICYNCGRSGHIAKDC---NEPKREREQCCYSCGRPGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C D ++ +CY C FGH+ QV CY CG++GH+ C+
Sbjct: 104 C------DHQEEQKCYSCGEFGHI------QKDCTQVKCYRCGETGHVAINCS------- 144
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K + + CY+CG+ GH AR C
Sbjct: 145 -KATEVNCYRCGESGHLAREC 164
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHLA 476
S+ C CG+ H A C + + C+ CG H K+C + Q C+ HLA
Sbjct: 44 SDICYRCGESGHHAKNCDLLED--ICYNCGRSGHIAKDCNEPKREREQCCYSCGRPGHLA 101
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DC ++ C CG+ GH D +++CY C GH V +
Sbjct: 102 RDC------DHQEEQKCYSCGEFGHI---------QKDCTQVKCYRCGETGH---VAINC 143
Query: 537 IGLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 144 SKATEVNCYRCGESGHLAREC 164
>gi|262072939|dbj|BAI47777.1| CCHC-type zinc finger, nucleic acid binding protein [Sus scrofa]
Length = 137
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 14 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 70
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 71 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 111
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 112 -KTSEVNCYRCGESGHLAREC 131
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 12 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 69
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 70 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 113
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 114 --SEVNCYRCGESGHLAREC 131
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 49 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 106
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGH 501
A +C T + N C RCG+SGH
Sbjct: 107 AINCSKTSEVN------CYRCGESGH 126
>gi|284925124|ref|NP_001165425.1| cellular nucleic acid binding protein b [Xenopus laevis]
gi|1531585|emb|CAA69031.1| cellular nucleic acid binding protein [Xenopus laevis]
Length = 178
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPRKEREQCCYNCGKPGHLARD 111
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
CE HAD+ K CY C FGH+ +V CY CG +GH+ C+
Sbjct: 112 CE---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGDTGHVAINCS------- 152
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 153 -KTSEVNCYRCGESGHLAREC 172
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 53 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLAR 110
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 111 DCEHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGDTGHVA-INCSKT 154
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 155 --SEVNCYRCGESGHLAREC 172
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----------------------EGEYHADDLKKIQCYICK 524
+SSN C +CG SGH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDI-CYRCG 59
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GHL + L++ +CYNCG+ GH+ +C K+ CY CGK GH AR
Sbjct: 60 ESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGHLAR 110
Query: 585 RC 586
C
Sbjct: 111 DC 112
>gi|431913718|gb|ELK15208.1| Cellular nucleic acid-binding protein [Pteropus alecto]
Length = 189
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 66 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 122
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 123 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 163
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 164 -KTSEVNCYRCGESGHLAREC 183
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 64 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 121
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 122 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 165
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 166 --SEVNCYRCGESGHLAREC 183
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 32/121 (26%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG----------------------EYHADDLKKIQCYICKS 525
+SSN C +CG SGH C ++ + L I CY C
Sbjct: 13 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI-CYRCGE 71
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH AR
Sbjct: 72 SGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARD 122
Query: 586 C 586
C
Sbjct: 123 C 123
>gi|98986202|dbj|BAE94497.1| Vasa [Polyandrocarpa misakiensis]
Length = 705
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 39/153 (25%)
Query: 443 QNKPCFLCGSFKHRWKNCKQG-------QDCFINKGSEHLASDCPG-TDQGNNLSSNFCL 494
+N+ CF CG H ++C G + CF H++ DCP T G SS C
Sbjct: 67 RNRSCFKCGQEGHMSRDCTSGASGDTQAKKCFKCGEEGHMSRDCPSNTSTG---SSKACF 123
Query: 495 RCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLG 554
+CG+ GH C + +C+ CG+ GH+
Sbjct: 124 KCGEEGHMSRECPNNNNN---------------------------NSKACFKCGEEGHMS 156
Query: 555 PECANSCEALNG-KKSNLICYKCGKEGHFARRC 586
EC N+ + +G S+ C+KCG+EGH +R C
Sbjct: 157 RECPNNNSSKDGFGTSSRACFKCGEEGHMSREC 189
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQ 549
C +CG GH C D K +C+ C GH+ C N+S K +C+ CG+
Sbjct: 71 CFKCGQEGHMSRDCTSGASGDTQAK-KCFKCGEEGHMSRDCPSNTSTGSSK--ACFKCGE 127
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
GH+ EC N+ ++ C+KCG+EGH +R C +N
Sbjct: 128 EGHMSRECPNN-----NNNNSKACFKCGEEGHMSRECPNN 162
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
SC+ CGQ GH+ +C + +G C+KCG+EGH +R C SN
Sbjct: 70 SCFKCGQEGHMSRDCTS---GASGDTQAKKCFKCGEEGHMSRDCPSN 113
>gi|148535009|gb|ABQ85432.1| CCHC-type zinc finger [Cricetulus griseus]
Length = 164
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q +++ C+ CG H K+CK+ P
Sbjct: 38 DICYRCGESGHLAKDCDLQ-EDEACYNCGRGGHIAKDCKE-----------------PKR 79
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 80 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 122
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 123 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 158
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK H A C + K C+ CG F
Sbjct: 56 QEDEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 113
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 114 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGH 153
>gi|189303765|gb|ACD85807.1| cellular nucleic acid-binding protein [Ctenopharyngodon idella]
Length = 163
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 44/178 (24%)
Query: 425 CSNCGKENHTAATC----------KMQKQNKPCFLCGSFKHRWKNCKQGQD-CFINKGSE 473
CS CG+ H C + + ++ C+ CG H ++C+Q +D C+ S
Sbjct: 8 CSGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNCHRSG 67
Query: 474 HLASDC--PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH--- 528
H++ DC P ++ C CG +GH C+ HA++ K CY C FGH
Sbjct: 68 HISRDCKEPKKER-----EQCCYNCGKAGHVARDCD---HANEQK---CYSCGGFGHIQK 116
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
LC +V CY CG+ GH+ +C+ K + + CY CGK GH AR C
Sbjct: 117 LC---------DKVKCYRCGEIGHVAVQCS--------KATEVNCYNCGKTGHLAREC 157
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 14/105 (13%)
Query: 487 NLSSNFCLRCGDSGHDLSSC-----EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
++S++ C CG SGH + +C K + CY C GH+ + +
Sbjct: 2 DMSTSECSGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHI----ARDCEQTE 57
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNC +SGH+ +C K+ CY CGK GH AR C
Sbjct: 58 DACYNCHRSGHISRDCKEP-----KKEREQCCYNCGKAGHVARDC 97
>gi|71398909|ref|XP_802672.1| poly-zinc finger protein 2 [Trypanosoma cruzi strain CL Brener]
gi|70864476|gb|EAN81226.1| poly-zinc finger protein 2, putative [Trypanosoma cruzi]
Length = 192
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 20/177 (11%)
Query: 421 NSETCSNCGKENHTAATCK--MQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSE 473
N C CGK H + C + +N PCF C HR NC Q C+
Sbjct: 21 NESLCFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRANNCPLAPPEARQPCYRCGEEG 80
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H++ DC T+ S C C +GH C + ++ ++C C GH+ C
Sbjct: 81 HISRDC--TNPRLPRSEQSCFHCHKTGHYARECP-----EVIENLKCNSCGVTGHIARRC 133
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
C+ CG GH+ C N+ G+ +CY CG++GH AR C S
Sbjct: 134 PERIRAARAFYPCFRCGMQGHVARNCPNTRLPYEGQ----LCYVCGEKGHLARDCKS 186
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 19/170 (11%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-----CFINKGSEHLASD 478
C CG HT+ C CF CG H K+C D CF + + H A++
Sbjct: 2 VCYRCGGVGHTSRDCSRPVNESLCFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRANN 61
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ--CYICKSFGHLCCVNSSI 536
CP + C RCG+ GH C L + + C+ C GH
Sbjct: 62 CPLAPPE---ARQPCYRCGEEGHISRDCTN----PRLPRSEQSCFHCHKTGHY--ARECP 112
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
++ + C +CG +GH+ C E + ++ C++CG +GH AR C
Sbjct: 113 EVIENLKCNSCGVTGHIARRCP---ERIRAARAFYPCFRCGMQGHVARNC 159
>gi|291409842|ref|XP_002721203.1| PREDICTED: cellular nucleic acid binding protein-like isoform 2
[Oryctolagus cuniculus]
Length = 161
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 73/177 (41%), Gaps = 34/177 (19%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP---------CFLCGSFKHRWKNCKQGQD--CFIN 469
+S C CG+ H A C C+ CG H K+C +D C+
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDEACYNC 61
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
H+A DC + C CG GH C+ HAD+ K CY C FGH+
Sbjct: 62 GRGGHIAKDCK---EPKREREQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI 112
Query: 530 CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+V CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 113 ------QKDCTKVKCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 155
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ----CYICKSFGHLCCVNSSIIGLKQ-V 542
+SSN C +CG SGH C + + CY C GHL + L++
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHL----AKDCDLQEDE 56
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 ACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 95
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK H A C + K C+ CG F
Sbjct: 53 QEDEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 110
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 111 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGH 150
>gi|189524881|ref|XP_001922882.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Danio
rerio]
gi|189524883|ref|XP_001922883.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Danio
rerio]
gi|326671493|ref|XP_003199446.1| PREDICTED: cellular nucleic acid-binding protein [Danio rerio]
gi|326671495|ref|XP_003199447.1| PREDICTED: cellular nucleic acid-binding protein [Danio rerio]
Length = 161
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 28/143 (19%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H ++C++ +D N G H++ DC P ++ C CG +GH
Sbjct: 38 CYRCGEPGHVARDCERTEDACYNCGRGGHISRDCKEPKKER-----EQVCYNCGKAGHMA 92
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C+ HA++ K CY C FGH+ G ++V CY CG+ GH+ +C+
Sbjct: 93 RDCD---HANEQK---CYSCGGFGHI------QKGCEKVKCYRCGEIGHVAVQCS----- 135
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
K S + CY CGK GH A+ C
Sbjct: 136 ---KASEVNCYNCGKSGHVAKEC 155
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 25/138 (18%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHLASDC 479
C CG+ H A C ++ C+ CG H ++CK+ Q C+ + H+A DC
Sbjct: 38 CYRCGEPGHVARDC--ERTEDACYNCGRGGHISRDCKEPKKEREQVCYNCGKAGHMARDC 95
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
D N C CG GH CE K++CY C GH V
Sbjct: 96 ---DHANEQK---CYSCGGFGHIQKGCE---------KVKCYRCGEIGH---VAVQCSKA 137
Query: 540 KQVSCYNCGQSGHLGPEC 557
+V+CYNCG+SGH+ EC
Sbjct: 138 SEVNCYNCGKSGHVAKEC 155
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKK-----IQCYICKSFGHLCCVNSSIIGLKQV 542
+SSN C CG +GH + +C + + CY C GH+ + +
Sbjct: 1 MSSNECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHV----ARDCERTED 56
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GH+ +C K+ +CY CGK GH AR C
Sbjct: 57 ACYNCGRGGHISRDCKEP-----KKEREQVCYNCGKAGHMARDC 95
>gi|343416463|emb|CCD20360.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 416
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 21/132 (15%)
Query: 440 MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDS 499
M Q + CF CG F H + C CF H +++CP D G C RC +
Sbjct: 4 MSAQTR-CFNCGHFGHSSQLCASKPVCFHCFMPGHTSTECPRKDMG-----RLCYRCKEP 57
Query: 500 GHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
GHD+ A L+ QC++C GHL ++ +V C C Q GH+ C
Sbjct: 58 GHDM--------AKSLQSPQCHMCNQTGHL------VVKCPEVLCNWCHQKGHMASACKM 103
Query: 560 S-CEALNGKKSN 570
S C G S+
Sbjct: 104 SPCSTDGGSHSS 115
>gi|149642096|ref|XP_001505515.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Ornithorhynchus anatinus]
Length = 177
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 110
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 111 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 151
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 152 -KTSEVNCYRCGESGHLAREC 171
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 52 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 109
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 110 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 153
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 154 --SEVNCYRCGESGHLAREC 171
>gi|149728229|ref|XP_001488727.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Equus caballus]
gi|291393358|ref|XP_002713211.1| PREDICTED: zinc finger protein 9 isoform 3 [Oryctolagus cuniculus]
gi|296225968|ref|XP_002758717.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Callithrix jacchus]
gi|332261809|ref|XP_003279959.1| PREDICTED: cellular nucleic acid-binding protein isoform 3
[Nomascus leucogenys]
gi|397518584|ref|XP_003829464.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Pan
paniscus]
gi|402887091|ref|XP_003906938.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037475|ref|XP_003950235.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951818|ref|XP_003982590.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Felis
catus]
gi|16549164|dbj|BAB70769.1| unnamed protein product [Homo sapiens]
gi|119599677|gb|EAW79271.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_a [Homo sapiens]
gi|119599680|gb|EAW79274.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_a [Homo sapiens]
Length = 167
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 44 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 100
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 101 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 141
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 142 -KTSEVNCYRCGESGHLAREC 161
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 42 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 99
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 100 DCDHADEQK------CYSCGEFGHIQK---------DCTKVKCYRCGETGHVA-INCSKT 143
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 144 --SEVNCYRCGESGHLAREC 161
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 20/110 (18%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ-----------CYICKSFGHLCCVNSSI 536
+SSN C +CG SGH C + + CY C GHL +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHL----AKD 56
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 CDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 101
>gi|89269563|emb|CAJ82604.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [Xenopus (Silurana) tropicalis]
gi|115292111|gb|AAI22021.1| cnbp protein [Xenopus (Silurana) tropicalis]
Length = 177
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPRKEREQCCYNCGKPGHLARD 110
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 111 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 151
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 152 -KTSEVNCYRCGESGHLAREC 171
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 52 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLAR 109
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 110 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 153
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 154 --SEVNCYRCGESGHLAREC 171
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 32/121 (26%)
Query: 488 LSSNFCLRCGDSGHDLSSC----------------------EGEYHADDLKKIQCYICKS 525
+SSN C +CG +GH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDI-CYRCGE 59
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
GHL + L++ +CYNCG+ GH+ +C K+ CY CGK GH AR
Sbjct: 60 SGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGHLARD 110
Query: 586 C 586
C
Sbjct: 111 C 111
>gi|55925630|ref|NP_083434.1| zinc finger CCHC domain-containing protein 13 [Mus musculus]
gi|12854262|dbj|BAB29977.1| unnamed protein product [Mus musculus]
gi|21425582|emb|CAD33940.1| cellular nucleic acid binding-like protein [Mus musculus]
gi|148682147|gb|EDL14094.1| cellular nucleic acid binding protein 2 [Mus musculus]
gi|148877851|gb|AAI45773.1| Zinc finger, CCHC domain containing 13 [Mus musculus]
gi|148878274|gb|AAI45775.1| Zinc finger, CCHC domain containing 13 [Mus musculus]
Length = 170
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 24/150 (16%)
Query: 438 CKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRC 496
C Q+ C+ CG H K+C QD N G H+A DC Q C C
Sbjct: 38 CSTANQSDVCYRCGETGHYAKDCDLLQDTCYNCGRRGHIAKDC---TQAKREREQCCYIC 94
Query: 497 GDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPE 556
GH C + ++ +CY C FGH+ Q+ CY CG++GH+
Sbjct: 95 SQPGHLARDC------NRQEEQKCYTCGEFGHI------QKDCTQIKCYRCGENGHMAVN 142
Query: 557 CANSCEALNGKKSNLICYKCGKEGHFARRC 586
C+ K S + CY+CG+ GH AR C
Sbjct: 143 CS--------KTSEVSCYRCGESGHLAREC 164
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHLA 476
S+ C CG+ H A C + + C+ CG H K+C Q Q C+I HLA
Sbjct: 44 SDVCYRCGETGHYAKDCDLLQDT--CYNCGRRGHIAKDCTQAKREREQCCYICSQPGHLA 101
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DC N C CG+ GH D +I+CY C GH+ VN S
Sbjct: 102 RDC------NRQEEQKCYTCGEFGHI---------QKDCTQIKCYRCGENGHMA-VNCSK 145
Query: 537 IGLKQVSCYNCGQSGHLGPEC 557
+VSCY CG+SGHL EC
Sbjct: 146 T--SEVSCYRCGESGHLAREC 164
>gi|54696090|gb|AAV38417.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [synthetic construct]
gi|61368820|gb|AAX43242.1| zinc finger protein 9 [synthetic construct]
Length = 178
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 110
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 111 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 151
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 152 -KTSEVNCYRCGESGHLAREC 171
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 67/147 (45%), Gaps = 25/147 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 52 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 109
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 110 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 153
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEAL 564
+V+CY CG+SGHL EC AL
Sbjct: 154 --SEVNCYRCGESGHLARECTIEATAL 178
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 32/121 (26%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG----------------------EYHADDLKKIQCYICKS 525
+SSN C +CG SGH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI-CYRCGE 59
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH AR
Sbjct: 60 SGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARD 110
Query: 586 C 586
C
Sbjct: 111 C 111
>gi|4827071|ref|NP_003409.1| cellular nucleic acid-binding protein isoform 3 [Homo sapiens]
gi|12018264|ref|NP_072120.1| cellular nucleic acid-binding protein [Rattus norvegicus]
gi|197099834|ref|NP_001126703.1| cellular nucleic acid-binding protein [Pongo abelii]
gi|356582433|ref|NP_001239193.1| cellular nucleic acid-binding protein isoform 1 [Canis lupus
familiaris]
gi|301764545|ref|XP_002917687.1| PREDICTED: cellular nucleic acid-binding protein-like [Ailuropoda
melanoleuca]
gi|332261811|ref|XP_003279960.1| PREDICTED: cellular nucleic acid-binding protein isoform 4
[Nomascus leucogenys]
gi|332817849|ref|XP_516737.3| PREDICTED: uncharacterized protein LOC460682 isoform 4 [Pan
troglodytes]
gi|338714528|ref|XP_003363101.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|344275961|ref|XP_003409779.1| PREDICTED: cellular nucleic acid-binding protein-like [Loxodonta
africana]
gi|348553985|ref|XP_003462806.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Cavia porcellus]
gi|354482847|ref|XP_003503607.1| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Cricetulus griseus]
gi|390475369|ref|XP_002758716.2| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Callithrix jacchus]
gi|397518580|ref|XP_003829462.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Pan
paniscus]
gi|402887087|ref|XP_003906936.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|403268271|ref|XP_003926201.1| PREDICTED: cellular nucleic acid-binding protein [Saimiri
boliviensis boliviensis]
gi|410037468|ref|XP_003950232.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410037472|ref|XP_003950234.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410037479|ref|XP_003950237.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951814|ref|XP_003982588.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Felis
catus]
gi|426342036|ref|XP_004036322.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|426342040|ref|XP_004036324.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Gorilla
gorilla gorilla]
gi|426342042|ref|XP_004036325.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Gorilla
gorilla gorilla]
gi|426342044|ref|XP_004036326.1| PREDICTED: cellular nucleic acid-binding protein isoform 5 [Gorilla
gorilla gorilla]
gi|441665181|ref|XP_004091798.1| PREDICTED: cellular nucleic acid-binding protein [Nomascus
leucogenys]
gi|441665186|ref|XP_004091799.1| PREDICTED: cellular nucleic acid-binding protein [Nomascus
leucogenys]
gi|50401851|sp|P62634.1|CNBP_RAT RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|50401852|sp|P62633.1|CNBP_HUMAN RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|75054771|sp|Q5R5R5.1|CNBP_PONAB RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|8650478|gb|AAF78224.1|AF242550_1 cellular nucleic acid binding protein [Rattus norvegicus]
gi|643576|gb|AAA61975.1| SRE-binding protein [Homo sapiens]
gi|790571|gb|AAA91782.1| nucleic acid binding protein [Homo sapiens]
gi|809511|dbj|BAA08212.1| Cellular Nucleic Acid Binding Protein [Rattus norvegicus]
gi|26344578|dbj|BAC35938.1| unnamed protein product [Mus musculus]
gi|38328236|gb|AAH62225.1| CCHC-type zinc finger, nucleic acid binding protein [Rattus
norvegicus]
gi|40738013|gb|AAR89462.1| zinc finger protein 9 [Homo sapiens]
gi|40738017|gb|AAR89464.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|55732400|emb|CAH92901.1| hypothetical protein [Pongo abelii]
gi|62205335|gb|AAH93058.1| CCHC-type zinc finger, nucleic acid binding protein [Homo sapiens]
gi|67970964|dbj|BAE01824.1| unnamed protein product [Macaca fascicularis]
gi|71891589|dbj|BAE16993.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|71891591|dbj|BAE16994.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|74144600|dbj|BAE27288.1| unnamed protein product [Mus musculus]
gi|74191437|dbj|BAE30298.1| unnamed protein product [Mus musculus]
gi|74195828|dbj|BAE30476.1| unnamed protein product [Mus musculus]
gi|74211374|dbj|BAE26440.1| unnamed protein product [Mus musculus]
gi|74226682|dbj|BAE26992.1| unnamed protein product [Mus musculus]
gi|74226907|dbj|BAE27097.1| unnamed protein product [Mus musculus]
gi|74226950|dbj|BAE27117.1| unnamed protein product [Mus musculus]
gi|90084990|dbj|BAE91236.1| unnamed protein product [Macaca fascicularis]
gi|119599679|gb|EAW79273.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_c [Homo sapiens]
gi|119599683|gb|EAW79277.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_c [Homo sapiens]
gi|148666812|gb|EDK99228.1| cellular nucleic acid binding protein, isoform CRA_a [Mus musculus]
gi|149036676|gb|EDL91294.1| cellular nucleic acid binding protein 1, isoform CRA_b [Rattus
norvegicus]
gi|189067296|dbj|BAG37006.1| unnamed protein product [Homo sapiens]
gi|208965940|dbj|BAG72984.1| CCHC-type zinc finger, nucleic acid binding protein [synthetic
construct]
gi|281347013|gb|EFB22597.1| hypothetical protein PANDA_006035 [Ailuropoda melanoleuca]
gi|344253372|gb|EGW09476.1| Cellular nucleic acid-binding protein [Cricetulus griseus]
gi|351695335|gb|EHA98253.1| Cellular nucleic acid-binding protein [Heterocephalus glaber]
gi|387543018|gb|AFJ72136.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
gi|410253690|gb|JAA14812.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|440895043|gb|ELR47334.1| Cellular nucleic acid-binding protein [Bos grunniens mutus]
gi|444512840|gb|ELV10182.1| Cellular nucleic acid-binding protein [Tupaia chinensis]
Length = 177
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 110
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 111 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 151
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 152 -KTSEVNCYRCGESGHLAREC 171
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 52 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 109
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 110 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 153
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 154 --SEVNCYRCGESGHLAREC 171
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 32/121 (26%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG----------------------EYHADDLKKIQCYICKS 525
+SSN C +CG SGH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI-CYRCGE 59
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH AR
Sbjct: 60 SGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARD 110
Query: 586 C 586
C
Sbjct: 111 C 111
>gi|410293500|gb|JAA25350.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 176
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 53 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 109
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 110 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 150
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 151 -KTSEVNCYRCGESGHLAREC 170
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 51 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 108
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 109 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 152
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 153 --SEVNCYRCGESGHLAREC 170
>gi|383421411|gb|AFH33919.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
gi|410221754|gb|JAA08096.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 176
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 53 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 109
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 110 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 150
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 151 -KTSEVNCYRCGESGHLAREC 170
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 51 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 108
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 109 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 152
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 153 --SEVNCYRCGESGHLAREC 170
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 31/120 (25%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------------EYHADDLKKIQCYICKSF 526
+SSN C +CG SGH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFTSDRGFQFVSSSLPDI-CYRCGES 59
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 60 GHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 110
>gi|334342426|ref|XP_001378413.2| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Monodelphis domestica]
gi|395516728|ref|XP_003762539.1| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Sarcophilus harrisii]
Length = 177
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 110
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 111 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 151
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 152 -KTSEVNCYRCGESGHLAREC 171
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 52 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 109
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 110 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 153
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 154 --SEVNCYRCGESGHLAREC 171
>gi|50471|emb|CAA45345.1| cellular nucleic acid binding protein clone 6 [Mus musculus]
gi|50473|emb|CAA77896.1| cellular nucleic acid binding protein clone 6 [Mus musculus]
Length = 170
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 104 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 144
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 145 -KTSEVNCYRCGESGHLAREC 164
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 45 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 102
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 103 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 146
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 147 --SEVNCYRCGESGHLAREC 164
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 25/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+ SN C +CG SGH C ++ + L I CY C GHL
Sbjct: 1 MRSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 104
>gi|348540579|ref|XP_003457765.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Oreochromis niloticus]
Length = 170
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 32/148 (21%)
Query: 444 NKPCFLCGSFKHRWKNCKQGQDCFINKGSE-HLASDC--PGTDQGNNLSSNFCLRCGDSG 500
N C+ CG H ++C++ +D N G E H++ DC P ++ C CG +G
Sbjct: 44 NLFCYRCGELGHVARDCERTEDACYNCGREDHISRDCKEPKKER-----EQLCYNCGKAG 98
Query: 501 HDLSSCEGEYHADDLKKIQCYICKSFGHL--CCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
H +C HA + K CY C SFGH+ CC ++V CY CG+ GH+ C+
Sbjct: 99 HMARNCN---HAHEQK---CYSCGSFGHIQKCC--------EKVKCYRCGEIGHVAVHCS 144
Query: 559 NSCEALNGKKSNLICYKCGKEGHFARRC 586
K S L CY GK GH A+ C
Sbjct: 145 --------KASELNCYNYGKSGHLAKEC 164
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 23/113 (20%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG--------------EYHADDLKKIQCYICKSFGHLCCVN 533
+SSN C CG SGH + +C + H + CY C GH+
Sbjct: 1 MSSNECFGCGHSGHWVKNCPSGGRGRGKGRGRGKGDTHHQTSMNLFCYRCGELGHV---- 56
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ + +CYNCG+ H+ +C K+ +CY CGK GH AR C
Sbjct: 57 ARDCERTEDACYNCGREDHISRDCKEP-----KKEREQLCYNCGKAGHMARNC 104
>gi|327265859|ref|XP_003217725.1| PREDICTED: cellular nucleic acid-binding protein-like [Anolis
carolinensis]
Length = 170
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPRREREQCCYNCGKPGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 104 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 144
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 145 -KTSEVNCYRCGESGHLAREC 164
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 45 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPRREREQCCYNCGKPGHLAR 102
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 103 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 146
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 147 --SEVNCYRCGESGHLAREC 164
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG +GH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQEDACYNCGRGGHIAKDCKEP-----RREREQCCYNCGKPGHLARDC 104
>gi|300122354|emb|CBK22926.2| unnamed protein product [Blastocystis hominis]
Length = 158
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 74/179 (41%), Gaps = 42/179 (23%)
Query: 425 CSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNC--KQGQD----CFINKGSE 473
C CG+ H A C + Q KP C++CG F H ++C + G++ C+
Sbjct: 3 CYVCGQSGHKARDCPNRSQQKPGAGKKCYVCGGFGHVARDCPNQNGENTESVCYNCGKPG 62
Query: 474 HLASDCP----GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
H+A+DCP G + C C GH C E + C C+ GH+
Sbjct: 63 HIAADCPEERTSRPTGRAAKTIICRNCNKEGHFARDCPNE--------VVCRNCRQPGHI 114
Query: 530 C--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C N ++ C NC Q GH +C N +C+KCG+ GH AR C
Sbjct: 115 ARDCTNQAV-------CRNCNQPGHFARDCPNE----------TVCHKCGQSGHKARDC 156
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 32/126 (25%)
Query: 465 DCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICK 524
+C++ S H A DCP Q + +CY+C
Sbjct: 2 ECYVCGQSGHKARDCPNRSQQKPGAGK---------------------------KCYVCG 34
Query: 525 SFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECA--NSCEALNGKKSNLICYKCGKEG 580
FGH+ C N + + V CYNCG+ GH+ +C + +IC C KEG
Sbjct: 35 GFGHVARDCPNQNGENTESV-CYNCGKPGHIAADCPEERTSRPTGRAAKTIICRNCNKEG 93
Query: 581 HFARRC 586
HFAR C
Sbjct: 94 HFARDC 99
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 518 IQCYICKSFGHLC--CVNSSI----IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL 571
++CY+C GH C N S G K CY CG GH+ +C N NG+ +
Sbjct: 1 MECYVCGQSGHKARDCPNRSQQKPGAGKK---CYVCGGFGHVARDCPNQ----NGENTES 53
Query: 572 ICYKCGKEGHFARRC 586
+CY CGK GH A C
Sbjct: 54 VCYNCGKPGHIAADC 68
>gi|310756752|gb|ADP20517.1| cellular nucleic acid binding protein [Fukomys anselli]
Length = 178
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q +++ C+ CG H K+CK+ P
Sbjct: 52 DICYRCGESGHLAKDCDLQ-EDEACYNCGRGGHIAKDCKE-----------------PKR 93
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 94 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 136
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 137 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 172
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK H A C + K C+ CG F
Sbjct: 70 QEDEACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 127
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 128 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGH 167
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG----------------------EYHADDLKKIQCYICKS 525
+SSN C +CG +GH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI-CYRCGE 59
Query: 526 FGHLCCVNSSIIGLKQ-VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH AR
Sbjct: 60 SGHL----AKDCDLQEDEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLAR 110
Query: 585 RC 586
C
Sbjct: 111 DC 112
>gi|449473367|ref|XP_002187556.2| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Taeniopygia guttata]
Length = 170
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 104 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 144
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 145 -KTSEVNCYRCGESGHLAREC 164
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 45 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 102
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 103 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 146
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 147 --SEVNCYRCGESGHLAREC 164
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG +GH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 104
>gi|7304969|ref|NP_038521.1| cellular nucleic acid-binding protein isoform 1 [Mus musculus]
gi|187608732|ref|NP_001120665.1| cellular nucleic acid-binding protein isoform 2 [Homo sapiens]
gi|395847858|ref|XP_003796581.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Otolemur garnettii]
gi|395847860|ref|XP_003796582.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Otolemur garnettii]
gi|395847862|ref|XP_003796583.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Otolemur garnettii]
gi|50403746|sp|P53996.2|CNBP_MOUSE RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|854675|gb|AAB60490.1| cellular nucleic acid binding protein [Mus musculus]
gi|30059133|gb|AAO31613.1| cellular nucleic acid binding protein [Mus musculus]
gi|37194897|gb|AAH58723.1| Cellular nucleic acid binding protein [Mus musculus]
gi|40738015|gb|AAR89463.1| cellular nucleic acid binding protein [Mus musculus]
gi|54696094|gb|AAV38419.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [Homo sapiens]
gi|68304555|gb|AAY89856.1| cellular nucleic acid binding protein alpha variant 1 [Homo
sapiens]
gi|74194928|dbj|BAE26042.1| unnamed protein product [Mus musculus]
gi|74204641|dbj|BAE35390.1| unnamed protein product [Mus musculus]
gi|310756754|gb|ADP20518.1| cellular nucleic acid binding protein [Heterocephalus glaber]
Length = 178
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q +++ C+ CG H K+CK+ P
Sbjct: 52 DICYRCGESGHLAKDCDLQ-EDEACYNCGRGGHIAKDCKE-----------------PKR 93
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 94 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 136
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 137 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 172
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK H A C + K C+ CG F
Sbjct: 70 QEDEACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 127
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 128 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGH 167
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG----------------------EYHADDLKKIQCYICKS 525
+SSN C +CG SGH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI-CYRCGE 59
Query: 526 FGHLCCVNSSIIGLKQ-VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH AR
Sbjct: 60 SGHL----AKDCDLQEDEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLAR 110
Query: 585 RC 586
C
Sbjct: 111 DC 112
>gi|291409840|ref|XP_002721202.1| PREDICTED: cellular nucleic acid binding protein-like isoform 1
[Oryctolagus cuniculus]
Length = 168
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q +++ C+ CG H K+CK+ P
Sbjct: 42 DICYRCGESGHLAKDCDLQ-EDEACYNCGRGGHIAKDCKE-----------------PKR 83
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 84 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 126
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 127 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 162
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK H A C + K C+ CG F
Sbjct: 60 QEDEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 117
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 118 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGH 157
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ-----------CYICKSFGHLCCVNSSI 536
+SSN C +CG SGH C + + CY C GHL +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHL----AKD 56
Query: 537 IGLKQ-VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 CDLQEDEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 102
>gi|387914596|gb|AFK10907.1| cellular nucleic acid-binding protein-like protein [Callorhinchus
milii]
Length = 167
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 44 CYRCGESGHLAKDCDLQEDACYNCGKGGHIAKDC---KEPKKEREQCCYNCGKPGHLARD 100
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 101 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 141
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 142 -KTSEVNCYRCGEAGHLAREC 161
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 28/114 (24%)
Query: 488 LSSNFCLRCGDSGHDLSSCE---------------GEYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG +GH C G A D+ CY C GHL
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDI----CYRCGESGHL--- 53
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C K+ CY CGK GH AR C
Sbjct: 54 -AKDCDLQEDACYNCGKGGHIAKDCKEP-----KKEREQCCYNCGKPGHLARDC 101
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C NCGK H A C + K C+ CG F H K+C + + C+ + H+A +C T
Sbjct: 86 QCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKT 143
Query: 483 DQGNNLSSNFCLRCGDSGH 501
+ N C RCG++GH
Sbjct: 144 SEVN------CYRCGEAGH 156
>gi|427788709|gb|JAA59806.1| Putative protein self-association [Rhipicephalus pulchellus]
Length = 856
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 20/156 (12%)
Query: 447 CFLCGSFKHRWKNCKQGQD---------CFINKGSEHLASDCPGTDQGNNLSSNF---CL 494
CF C H ++C CF H++ DCP D + + C
Sbjct: 177 CFKCNQEGHMSRDCPNADSGGGGGRGRGCFKCGEEGHMSRDCPNADSSSGGGRSGGRGCF 236
Query: 495 RCGDSGHDLSSCEGE--YHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQS 550
+CG GH C C+ C GH+ C +S + C+NCG+
Sbjct: 237 KCGQEGHMSRDCPNSDSSGGGGGGGRGCFKCGEEGHMSRDCPTASSDDRPKRGCFNCGED 296
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH+ +C N + K C+KCG+EGH +R C
Sbjct: 297 GHMSRDCPNPQQERRSKG----CFKCGEEGHMSRDC 328
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 72/192 (37%), Gaps = 31/192 (16%)
Query: 424 TCSNCGKENHTAATCK------MQKQNKPCFLCGSFKHRWKNCKQG-----------QDC 466
C C +E H + C + + CF CG H ++C + C
Sbjct: 176 ACFKCNQEGHMSRDCPNADSGGGGGRGRGCFKCGEEGHMSRDCPNADSSSGGGRSGGRGC 235
Query: 467 FINKGSEHLASDCPGTDQGNNLSSNF--CLRCGDSGHDLSSCEGEYHADDLKKIQCYICK 524
F H++ DCP +D C +CG+ GH C +DD K C+ C
Sbjct: 236 FKCGQEGHMSRDCPNSDSSGGGGGGGRGCFKCGEEGHMSRDCP-TASSDDRPKRGCFNCG 294
Query: 525 SFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN--------GKKSNLICY 574
GH+ C N + C+ CG+ GH+ +C N G C+
Sbjct: 295 EDGHMSRDCPNPQQ-ERRSKGCFKCGEEGHMSRDCPNPDAGGGRGGDTSGEGGDRPRGCF 353
Query: 575 KCGKEGHFARRC 586
KC +EGH A+ C
Sbjct: 354 KCQQEGHMAKDC 365
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNF-CLRCGDSGH---DLSSCEGEYHADDLKKI 518
G+ CF H++ DCP D G C +CG+ GH D + +
Sbjct: 174 GRACFKCNQEGHMSRDCPNADSGGGGGRGRGCFKCGEEGHMSRDCPNADSSSGGGRSGGR 233
Query: 519 QCYICKSFGHLC--CVNS---SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLIC 573
C+ C GH+ C NS G C+ CG+ GH+ +C + K+ C
Sbjct: 234 GCFKCGQEGHMSRDCPNSDSSGGGGGGGRGCFKCGEEGHMSRDCPTASSDDRPKRG---C 290
Query: 574 YKCGKEGHFARRCGSNFKDR 593
+ CG++GH +R C + ++R
Sbjct: 291 FNCGEDGHMSRDCPNPQQER 310
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 58/166 (34%), Gaps = 34/166 (20%)
Query: 425 CSNCGKENHTAATCK--------MQKQNKPCFLCGSFKHRWKNCKQGQD----------C 466
C CG+E H + C + + CF CG H ++C C
Sbjct: 205 CFKCGEEGHMSRDCPNADSSSGGGRSGGRGCFKCGQEGHMSRDCPNSDSSGGGGGGGRGC 264
Query: 467 FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSF 526
F H++ DCP T ++ C CG+ GH C + + C+ C
Sbjct: 265 FKCGEEGHMSRDCP-TASSDDRPKRGCFNCGEDGHMSRDCPNPQQ--ERRSKGCFKCGEE 321
Query: 527 GHLC--CVNSSII-----------GLKQVSCYNCGQSGHLGPECAN 559
GH+ C N G + C+ C Q GH+ +C N
Sbjct: 322 GHMSRDCPNPDAGGGRGGDTSGEGGDRPRGCFKCQQEGHMAKDCTN 367
>gi|345329901|ref|XP_003431440.1| PREDICTED: cellular nucleic acid-binding protein-like
[Ornithorhynchus anatinus]
Length = 170
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 104 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 144
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 145 -KTSEVNCYRCGESGHLAREC 164
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 45 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 102
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 103 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 146
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 147 --SEVNCYRCGESGHLAREC 164
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+S+N C +CG SGH C ++ + L I CY C GHL
Sbjct: 1 MSNNECFKCGRSGHWARECPTGGGRGRGLRSRGRGFQFVSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 104
>gi|213623438|gb|AAI69746.1| CNBP protein [Xenopus laevis]
Length = 178
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPRKEREQCCYNCGKPGHLARD 111
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 112 CD---HADEHK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 152
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 153 -KTSEVNCYRCGESGHLAREC 172
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 53 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLAR 110
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ + C CG+ GH D K++CY C GH+ +N S
Sbjct: 111 DCDHADE------HKCYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 154
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 155 --SEVNCYRCGESGHLAREC 172
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----------------------EGEYHADDLKKIQCYICK 524
+SSN C +CG +GH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDI-CYRCG 59
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GHL + L++ +CYNCG+ GH+ +C K+ CY CGK GH AR
Sbjct: 60 ESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGHLAR 110
Query: 585 RC 586
C
Sbjct: 111 DC 112
>gi|77735399|ref|NP_001029396.1| cellular nucleic acid-binding protein [Bos taurus]
gi|157909784|ref|NP_001103216.1| cellular nucleic acid-binding protein isoform 3 [Mus musculus]
gi|187608750|ref|NP_001120668.1| cellular nucleic acid-binding protein isoform 6 [Homo sapiens]
gi|356582435|ref|NP_001239194.1| cellular nucleic acid-binding protein isoform 2 [Canis lupus
familiaris]
gi|332261807|ref|XP_003279958.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Nomascus leucogenys]
gi|332817847|ref|XP_003310041.1| PREDICTED: uncharacterized protein LOC460682 isoform 2 [Pan
troglodytes]
gi|332817851|ref|XP_003310042.1| PREDICTED: uncharacterized protein LOC460682 isoform 3 [Pan
troglodytes]
gi|334342424|ref|XP_003341812.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Monodelphis domestica]
gi|338714526|ref|XP_003363100.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|348553987|ref|XP_003462807.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Cavia porcellus]
gi|354482849|ref|XP_003503608.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Cricetulus griseus]
gi|390475371|ref|XP_003734945.1| PREDICTED: cellular nucleic acid-binding protein [Callithrix
jacchus]
gi|395516730|ref|XP_003762540.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Sarcophilus harrisii]
gi|397518582|ref|XP_003829463.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Pan
paniscus]
gi|402887089|ref|XP_003906937.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037470|ref|XP_003950233.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951816|ref|XP_003982589.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Felis
catus]
gi|426342038|ref|XP_004036323.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426342046|ref|XP_004036327.1| PREDICTED: cellular nucleic acid-binding protein isoform 6 [Gorilla
gorilla gorilla]
gi|110832801|sp|Q3T0Q6.1|CNBP_BOVIN RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|2136380|pir||A55499 zinc finger protein 9 - human
gi|292348|gb|AAA89198.1| nucleic acid binding protein [Mus sp.]
gi|12653049|gb|AAH00288.1| CNBP protein [Homo sapiens]
gi|15928890|gb|AAH14911.1| CNBP protein [Homo sapiens]
gi|55730956|emb|CAH92196.1| hypothetical protein [Pongo abelii]
gi|74207292|dbj|BAE30832.1| unnamed protein product [Mus musculus]
gi|74226825|dbj|BAE27058.1| unnamed protein product [Mus musculus]
gi|74354088|gb|AAI02299.1| CCHC-type zinc finger, nucleic acid binding protein [Bos taurus]
gi|119599678|gb|EAW79272.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_b [Homo sapiens]
gi|119599681|gb|EAW79275.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_b [Homo sapiens]
gi|149036675|gb|EDL91293.1| cellular nucleic acid binding protein 1, isoform CRA_a [Rattus
norvegicus]
gi|296474617|tpg|DAA16732.1| TPA: cellular nucleic acid-binding protein [Bos taurus]
gi|380816310|gb|AFE80029.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|383421415|gb|AFH33921.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|384949298|gb|AFI38254.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|410221752|gb|JAA08095.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|410253688|gb|JAA14811.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|410293498|gb|JAA25349.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 170
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 104 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 144
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 145 -KTSEVNCYRCGESGHLAREC 164
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 45 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 102
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 103 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 146
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 147 --SEVNCYRCGESGHLAREC 164
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG SGH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 104
>gi|119599682|gb|EAW79276.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_d [Homo sapiens]
gi|383421413|gb|AFH33920.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
Length = 171
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 48 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 104
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 105 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 145
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 146 -KTSEVNCYRCGESGHLAREC 165
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 46 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 103
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 104 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 147
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 148 --SEVNCYRCGESGHLAREC 165
>gi|54696092|gb|AAV38418.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [synthetic construct]
gi|61368826|gb|AAX43243.1| zinc finger protein 9 [synthetic construct]
Length = 171
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 104 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 144
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 145 -KTSEVNCYRCGESGHLAREC 164
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 45 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 102
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 103 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 146
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 147 --SEVNCYRCGESGHLAREC 164
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG SGH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 104
>gi|392881264|gb|AFM89464.1| cellular nucleic acid-binding protein-like protein [Callorhinchus
milii]
Length = 167
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 44 CYRCGESGHLAKDCDLQEDACYNCGKGGHIAKDC---KEPKKEREQCCYNCGKPGHLARD 100
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 101 CD---HADEQK---CYSCGEFGHI------RKDCTKVKCYRCGETGHVAINCS------- 141
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 142 -KTSEVNCYRCGEAGHLAREC 161
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 28/114 (24%)
Query: 488 LSSNFCLRCGDSGHDLSSCE---------------GEYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG +GH C G A D+ CY C GHL
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDI----CYRCGESGHL--- 53
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C K+ CY CGK GH AR C
Sbjct: 54 -AKDCDLQEDACYNCGKGGHIAKDCKEP-----KKEREQCCYNCGKPGHLARDC 101
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C NCGK H A C + K C+ CG F H K+C + + C+ + H+A +C T
Sbjct: 86 QCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIRKDCTKVK-CYRCGETGHVAINCSKT 143
Query: 483 DQGNNLSSNFCLRCGDSGH 501
+ N C RCG++GH
Sbjct: 144 SEVN------CYRCGEAGH 156
>gi|397570339|gb|EJK47249.1| hypothetical protein THAOC_34043 [Thalassiosira oceanica]
Length = 628
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C+NCG+ H A C Q KPC LC H C CF H++ +C +Q
Sbjct: 419 CNNCGEVGHMAKDCPKDGQLKPCGLCAGLGHEMWACPMKSICFNCGVPGHVSREC---NQ 475
Query: 485 GNNLSS-NFCLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLCCVNSS----IIG 538
+ C C S H C E ++A Q IC G + + G
Sbjct: 476 RRGVPERKICTICFRSDHHRFQCRERPWNA----PFQDAICMQTGRQGQLMKNEMRWFFG 531
Query: 539 LKQVSCYNCGQSGHLGPEC 557
L+ VSC+NCGQ GHLG +C
Sbjct: 532 LRGVSCFNCGQKGHLGIDC 550
>gi|358388038|gb|EHK25632.1| hypothetical protein TRIVIDRAFT_167877 [Trichoderma virens Gv29-8]
Length = 178
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 75/180 (41%), Gaps = 28/180 (15%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSEHLASDC 479
C +CG H A C + K C+ CG H ++C K + C+ H++ DC
Sbjct: 8 ACYSCGSTGHQARDCPTKGPAK-CYNCGGEGHISRDCTEPMKDNKSCYKCGQQGHISRDC 66
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ-------------CYICKSF 526
P + S C +CG+ GH SC CY C +
Sbjct: 67 PQAGGAGSGQSTECYKCGEKGHIARSCPKSGGGFGGNSYGGNSGGYGGGAGKTCYSCGGY 126
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH+ + G+K CYNCG+SGH +C E+ G+K ICYKC + GH +C
Sbjct: 127 GHM--SRECVNGMK---CYNCGESGHYSRDCPK--ESAGGEK---ICYKCQQSGHVQAQC 176
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 64/168 (38%), Gaps = 34/168 (20%)
Query: 416 DPPGWNSETCSNCGKENHTAATC-KMQKQNKPCFLCGSFKHRWKNCKQ------GQ--DC 466
D P C NCG E H + C + K NK C+ CG H ++C Q GQ +C
Sbjct: 21 DCPTKGPAKCYNCGGEGHISRDCTEPMKDNKSCYKCGQQGHISRDCPQAGGAGSGQSTEC 80
Query: 467 FINKGSEHLASDCP-------------GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD 513
+ H+A CP + + C CG GH C
Sbjct: 81 YKCGEKGHIARSCPKSGGGFGGNSYGGNSGGYGGGAGKTCYSCGGYGHMSREC------- 133
Query: 514 DLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
+ ++CY C GH C S G K CY C QSGH+ +C N
Sbjct: 134 -VNGMKCYNCGESGHYSRDCPKESAGGEK--ICYKCQQSGHVQAQCPN 178
>gi|345329903|ref|XP_003431441.1| PREDICTED: cellular nucleic acid-binding protein-like
[Ornithorhynchus anatinus]
Length = 167
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 44 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPKREREQCCYNCGKPGHLARD 100
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 101 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 141
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 142 -KTSEVNCYRCGESGHLAREC 161
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 42 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 99
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 100 DCDHADE------QKCYSCGEFGHIQK---------DCTKVKCYRCGETGHVA-INCSKT 143
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 144 --SEVNCYRCGESGHLAREC 161
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 20/110 (18%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ-----------CYICKSFGHLCCVNSSI 536
+S+N C +CG SGH C + + CY C GHL +
Sbjct: 1 MSNNECFKCGRSGHWARECPTGGGRGRGLRSRGRGGFSSGRDICYRCGESGHL----AKD 56
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 CDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 101
>gi|16797820|gb|AAL29186.1|AF204398_1 poly-zinc finger protein 2 [Trypanosoma cruzi]
Length = 192
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 69/168 (41%), Gaps = 15/168 (8%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-----CFINKGSEHLASD 478
C CG HT+ C CF CG H K+C D CF + + H A++
Sbjct: 2 VCYRCGGVGHTSRDCSRPVNESLCFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRANN 61
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
CP + C RCG+ GH C K C+ C GH I
Sbjct: 62 CPLAPPE---ARQPCYRCGEEGHISRDCTNP--RLPRSKQSCFHCHKTGHY--ARECRIV 114
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
++ + C +CG +GH+ C E + ++ C++CG +GH AR C
Sbjct: 115 IENLKCNSCGVTGHIARRCP---ERIRTARAFYPCFRCGMQGHVARNC 159
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 69/177 (38%), Gaps = 20/177 (11%)
Query: 421 NSETCSNCGKENHTAATCK--MQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSE 473
N C CGK H + C + +N PCF C HR NC Q C+
Sbjct: 21 NESLCFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRANNCPLAPPEARQPCYRCGEEG 80
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H++ DC T+ S C C +GH C ++ ++C C GH+ C
Sbjct: 81 HISRDC--TNPRLPRSKQSCFHCHKTGHYARECR-----IVIENLKCNSCGVTGHIARRC 133
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
C+ CG GH+ C N+ +CY CG++GH AR C S
Sbjct: 134 PERIRTARAFYPCFRCGMQGHVARNCPNT----RLPYEEQLCYVCGEKGHLARDCKS 186
>gi|429849218|gb|ELA24622.1| zinc knuckle domain protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 185
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 86/193 (44%), Gaps = 41/193 (21%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGS 472
PP + TC CG H A C + K C+ CG+ H ++C +G + C+ +
Sbjct: 9 PP---ARTCFTCGAAGHQARECPNRGAAK-CYNCGNEGHMSRDCPEGPKDTKSCYRCGQA 64
Query: 473 EHLASDCP--GTDQGNNLSSNFCLRCGDSGHDLSSC---------------EGEYHADDL 515
H++ DCP G G SS+ C +CG+ GH +C G Y
Sbjct: 65 GHISRDCPQGGNVGGGGASSSECYKCGEVGHIARNCPKSGGGYGGGGACYNSGGYGGASQ 124
Query: 516 KKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLIC 573
K CY C +GH+ C N S CYNCG++GH +C E+ G+K IC
Sbjct: 125 KT--CYSCGGYGHMSRDCTNGS-------KCYNCGENGHFSRDCPK--ESSGGEK---IC 170
Query: 574 YKCGKEGHFARRC 586
YKC + GH +C
Sbjct: 171 YKCQQPGHVQSQC 183
>gi|299116354|emb|CBN76156.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 859
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 62/168 (36%), Gaps = 41/168 (24%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C LCG+ H + ++G HLA CP D +C CG +GH + +C
Sbjct: 512 CTLCGAIGH---DDEEG----------HLADACPYVDVMEEGPEPYCSVCGKAGHSIDAC 558
Query: 507 EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL-----KQVSCYNCGQSGHLGPECANSC 561
E K C C+ GH C +I+ ++C NCG H C +
Sbjct: 559 ETACKGKSQLKFSCITCRDDGHTQCGKETILVFGNERGHAMTCCNCGLERHDWRSCPHQT 618
Query: 562 EA-----------------------LNGKKSNLICYKCGKEGHFARRC 586
EA G K+ ++CY CGK+GH C
Sbjct: 619 EAEILRECGYRFNSSAGGGNRRKSTGGGGKTYMVCYNCGKQGHGKSEC 666
>gi|2665788|gb|AAB88490.1| cellular nucleic acid binding protein [Gallus gallus]
Length = 172
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q +++ C+ CG H K+CK+ P
Sbjct: 46 DICYRCGESGHLAKDCDLQ-EDEACYNCGRGGHIAKDCKE-----------------PKR 87
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 88 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 130
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 131 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 166
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG----------------EYHADDLKKIQCYICKSFGHLCC 531
+SSN C +CG +GH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDI-CYRCGESGHL-- 57
Query: 532 VNSSIIGLKQ-VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 58 --AKDCDLQEDEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 106
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK H A C + K C+ CG F
Sbjct: 64 QEDEACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 121
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 122 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGH 161
>gi|387017354|gb|AFJ50795.1| Cellular nucleic acid binding protein [Crotalus adamanteus]
Length = 171
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q +++ C+ CG H K+CK+ P
Sbjct: 45 DICYRCGESGHLAKDCDLQ-EDEACYNCGRGGHIAKDCKE-----------------PKR 86
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 87 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 129
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 130 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 165
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 26/115 (22%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG +GH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQ-VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQEDEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 105
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK H A C + K C+ CG F
Sbjct: 63 QEDEACYNCGRGGHIAKDCK-EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 120
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 121 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGH 160
>gi|326492548|dbj|BAK02057.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
+ G+ CFI KG++H A +CP + + CL C + GH + +C + D LKK C
Sbjct: 67 RPGEQCFICKGTDHAAKNCPEKSYWDK--NKICLLCRERGHSMKNCPDKGDGD-LKKF-C 122
Query: 521 YICKSFGHLCCVNSSII---GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
Y C GH I G SC+ C Q GHL +C S + K C CG
Sbjct: 123 YNCGESGHSLSKCPKPIENGGTNFASCFVCKQQGHLSKDCPESTHGIYPKGG--CCKICG 180
Query: 578 KEGHFARRC 586
+ H AR C
Sbjct: 181 EVTHLARHC 189
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 447 CFLCGSFKHRWKNCKQ------GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSG 500
CF+C H KNC + + C + + H +CP D+G+ FC CG+SG
Sbjct: 72 CFICKGTDHAAKNCPEKSYWDKNKICLLCRERGHSMKNCP--DKGDGDLKKFCYNCGESG 129
Query: 501 HDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
H LS C C++CK GHL C ++ I K C CG+ HL C
Sbjct: 130 HSLSKCPKPIENGGTNFASCFVCKQQGHLSKDCPESTHGIYPKGGCCKICGEVTHLARHC 189
Query: 558 AN 559
N
Sbjct: 190 PN 191
>gi|157909782|ref|NP_001103215.1| cellular nucleic acid-binding protein isoform 2 [Mus musculus]
gi|187608744|ref|NP_001120667.1| cellular nucleic acid-binding protein isoform 5 [Homo sapiens]
gi|68359739|gb|AAY96754.1| cellular nucleic acid binding protein beta variant 1 [Homo sapiens]
gi|74142441|dbj|BAE31974.1| unnamed protein product [Mus musculus]
Length = 171
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q +++ C+ CG H K+CK+ P
Sbjct: 45 DICYRCGESGHLAKDCDLQ-EDEACYNCGRGGHIAKDCKE-----------------PKR 86
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 87 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 129
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 130 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 165
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 26/115 (22%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG SGH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQ-VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQEDEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 105
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK H A C + K C+ CG F
Sbjct: 63 QEDEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 120
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 121 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGH 160
>gi|335772494|gb|AEH58085.1| cellular nucleic acid-binding protein-like protein, partial [Equus
caballus]
Length = 166
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 43 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 99
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 100 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 140
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 141 -KTSEVNCYRCGESGHLAREC 160
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 41 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 98
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 99 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 142
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 143 --SEVNCYRCGESGHLAREC 160
>gi|26347241|dbj|BAC37269.1| unnamed protein product [Mus musculus]
Length = 171
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q +++ C+ CG H K+CK+ P
Sbjct: 45 DICYRCGEPGHLAKDCDLQ-EDEACYNCGRGGHIAKDCKE-----------------PKR 86
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 87 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 129
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 130 KCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 165
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 26/115 (22%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG SGH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGEPGHL--- 56
Query: 533 NSSIIGLKQ-VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQEDEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 105
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK H A C + K C+ CG F
Sbjct: 63 QEDEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 120
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 121 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGH 160
>gi|348540577|ref|XP_003457764.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Oreochromis niloticus]
Length = 161
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 32/145 (22%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSE-HLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H ++C++ +D N G E H++ DC P ++ C CG +GH
Sbjct: 38 CYRCGELGHVARDCERTEDACYNCGREDHISRDCKEPKKER-----EQLCYNCGKAGHMA 92
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHL--CCVNSSIIGLKQVSCYNCGQSGHLGPECANSC 561
+C HA + K CY C SFGH+ CC ++V CY CG+ GH+ C+
Sbjct: 93 RNCN---HAHEQK---CYSCGSFGHIQKCC--------EKVKCYRCGEIGHVAVHCS--- 135
Query: 562 EALNGKKSNLICYKCGKEGHFARRC 586
K S L CY GK GH A+ C
Sbjct: 136 -----KASELNCYNYGKSGHLAKEC 155
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 14/104 (13%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKK-----IQCYICKSFGHLCCVNSSIIGLKQV 542
+SSN C CG SGH + +C + + CY C GH+ + +
Sbjct: 1 MSSNECFGCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHV----ARDCERTED 56
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ H+ +C K+ +CY CGK GH AR C
Sbjct: 57 ACYNCGREDHISRDCKEP-----KKEREQLCYNCGKAGHMARNC 95
>gi|358386406|gb|EHK24002.1| hypothetical protein TRIVIDRAFT_138406, partial [Trichoderma virens
Gv29-8]
Length = 194
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/193 (24%), Positives = 68/193 (35%), Gaps = 41/193 (21%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC-----KQGQDCFINKGSEHLASDC 479
C CG H A C + C+ C H C + + C+ +G H+ +DC
Sbjct: 9 CYKCGNVGHYAEVC--SSAERLCYNCKQPGHESNGCPLPRSTEAKQCYHCQGLGHVQADC 66
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEG-----------------------EYHADDLK 516
P +S C CG GH +C A+ +
Sbjct: 67 PTLRLSGTATSGRCYNCGQPGHLARACPNPGNAGMGRGAPIGRGGFVGGYGRGGFANGPR 126
Query: 517 KIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---IC 573
CY C H + + + CY CG+ GH+ + C A NG N C
Sbjct: 127 PATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAGKTC 178
Query: 574 YKCGKEGHFARRC 586
Y+CG+ GH +R C
Sbjct: 179 YQCGEAGHISRDC 191
Score = 49.3 bits (116), Expect = 0.006, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 53/142 (37%), Gaps = 41/142 (28%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEG-------------EYHADDLKKI----QCYICKSFGH 528
++LS C +CG+ GH C E + L + QCY C+ GH
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRSTEAKQCYHCQGLGH 61
Query: 529 LC--CVNSSIIGLKQVS-CYNCGQSGHLGPECANSCEALNGKKSNL-------------- 571
+ C + G CYNCGQ GHL C N A G+ + +
Sbjct: 62 VQADCPTLRLSGTATSGRCYNCGQPGHLARACPNPGNAGMGRGAPIGRGGFVGGYGRGGF 121
Query: 572 -------ICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 122 ANGPRPATCYKCGGPNHFARDC 143
Score = 38.9 bits (89), Expect = 9.0, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 11/66 (16%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---------KQGQDCFINKGSEH 474
TC CG NH A C Q Q C+ CG H ++C G+ C+ + H
Sbjct: 129 TCYKCGGPNHFARDC--QAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAGH 186
Query: 475 LASDCP 480
++ DCP
Sbjct: 187 ISRDCP 192
>gi|301788510|ref|XP_002929671.1| PREDICTED: cellular nucleic acid-binding protein-like [Ailuropoda
melanoleuca]
Length = 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C + N G S H+A DC + S C CG GH
Sbjct: 83 CYRCGESGHHAKDCDFLEALCYNCGRSGHIAKDC---IERKRESEQCCYTCGRPGHLARD 139
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C D ++ +CY C +GH+ QV CY CG++GH+ C+
Sbjct: 140 C------DRQEEPKCYSCGEYGHI------QKDCSQVKCYRCGETGHMAINCS------- 180
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 181 -KTSEVNCYRCGESGHLAREC 200
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC-----KQGQDCFINKGSEHLAS 477
+ C CG+ H A C + C+ CG H K+C + Q C+ HLA
Sbjct: 81 DICYRCGESGHHAKDCDFLEAL--CYNCGRSGHIAKDCIERKRESEQCCYTCGRPGHLAR 138
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC ++ C CG+ GH D +++CY C GH+ +N S
Sbjct: 139 DCDRQEEPK------CYSCGEYGHI---------QKDCSQVKCYRCGETGHMA-INCSKT 182
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 183 --SEVNCYRCGESGHLAREC 200
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYH----------------ADDLKKIQCYICKSFGHLCC 531
+SSN C + G SGH C + +L I CY C GH
Sbjct: 36 MSSNECFKGGWSGHWARGCPRAGGSRGRGARGRGRASPSSSTNLPDI-CYRCGESGH--- 91
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
++ + CYNCG+SGH+ +C ++S CY CG+ GH AR C
Sbjct: 92 -HAKDCDFLEALCYNCGRSGHIAKDCIE-----RKRESEQCCYTCGRPGHLARDC 140
>gi|299752665|ref|XP_001841159.2| DNA-binding protein hexbp [Coprinopsis cinerea okayama7#130]
gi|298409943|gb|EAU80696.2| DNA-binding protein hexbp [Coprinopsis cinerea okayama7#130]
Length = 173
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 73/170 (42%), Gaps = 31/170 (18%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLAS 477
P + TC NCG E H + C + K C+ CG H ++C S++ A+
Sbjct: 21 PKAGTPTCYNCGGEGHVSRDCTQAAKPKSCYRCGEEGHLSRDCT----------SDNAAA 70
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
G +G C RCG +GH SC + Y + + CY C GHL +
Sbjct: 71 G--GVSRGGE-----CYRCGKTGHLARSCPDSGYGSFGGSQKTCYTCGGVGHL--SRDCV 121
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G K CYNC GH+ +C + CY+CG+EGH +R C
Sbjct: 122 QGSK---CYNCSSIGHISRDCP--------QPQKRACYQCGQEGHISRDC 160
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CG GH ++C CY C GH+ K SCY CG+ GH
Sbjct: 7 CFNCGGFGHQAANCP------KAGTPTCYNCGGEGHV--SRDCTQAAKPKSCYRCGEEGH 58
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
L +C + A G CY+CGK GH AR C
Sbjct: 59 LSRDCTSDNAAAGGVSRGGECYRCGKTGHLARSC 92
>gi|71416079|ref|XP_810083.1| poly-zinc finger protein 2 [Trypanosoma cruzi strain CL Brener]
gi|70874564|gb|EAN88232.1| poly-zinc finger protein 2, putative [Trypanosoma cruzi]
Length = 192
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 20/177 (11%)
Query: 421 NSETCSNCGKENHTAATCK--MQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSE 473
N C CGK H + C + +N PCF C HR NC Q C+
Sbjct: 21 NESLCFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRANNCPLAPPEARQPCYRCGEEG 80
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H++ DC T+ S C C +GH C + ++ ++C C GH+ C
Sbjct: 81 HISRDC--TNPRLPRSEQSCFHCHKTGHYARECP-----EVIENLKCNSCGVTGHIARRC 133
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
C+ CG GH+ C N+ +CY CG++GH AR C S
Sbjct: 134 PERIRTARAFYPCFRCGMQGHVARNCPNT----RLPYEEQLCYVCGEKGHLARDCKS 186
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 19/170 (11%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-----CFINKGSEHLASD 478
C CG HT+ C CF CG H K+C D CF + + H A++
Sbjct: 2 VCYRCGGVGHTSRDCSRPVNESLCFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRANN 61
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ--CYICKSFGHLCCVNSSI 536
CP + C RCG+ GH C L + + C+ C GH
Sbjct: 62 CPLAPPE---ARQPCYRCGEEGHISRDCTN----PRLPRSEQSCFHCHKTGHY--ARECP 112
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
++ + C +CG +GH+ C E + ++ C++CG +GH AR C
Sbjct: 113 EVIENLKCNSCGVTGHIARRCP---ERIRTARAFYPCFRCGMQGHVARNC 159
>gi|410988851|ref|XP_004000690.1| PREDICTED: cellular nucleic acid-binding protein-like [Felis catus]
Length = 171
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 64/143 (44%), Gaps = 28/143 (19%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H KNC +D N G S H+A DC P ++ C CG GH
Sbjct: 48 CYRCGESGHHAKNCDLLEDICYNCGRSGHIAKDCIEPKRER-----EQCCYTCGRPGHLA 102
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C D ++ +CY C +GH+ QV CY CG+ GH+ C+
Sbjct: 103 RDC------DRQEEQKCYSCGEYGHI------QKDCTQVKCYRCGEIGHMAINCS----- 145
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 146 ---KTSEVNCYRCGESGHLAREC 165
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC-----KQGQDCFINKGSEHLA 476
S+ C CG+ H A C + + C+ CG H K+C ++ Q C+ HLA
Sbjct: 45 SDICYRCGESGHHAKNCDLLED--ICYNCGRSGHIAKDCIEPKREREQCCYTCGRPGHLA 102
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DC + C CG+ GH D +++CY C GH+ +N S
Sbjct: 103 RDC------DRQEEQKCYSCGEYGHI---------QKDCTQVKCYRCGEIGHMA-INCSK 146
Query: 537 IGLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 147 T--SEVNCYRCGESGHLAREC 165
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C Q++ K C+ CG + H K+C Q C+ H+A +C T
Sbjct: 90 QCCYTCGRPGHLARDCDRQEEQK-CYSCGEYGHIQKDCTQ-VKCYRCGEIGHMAINCSKT 147
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGE 509
+ N C RCG+SGH C E
Sbjct: 148 SEVN------CYRCGESGHLARECPTE 168
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSC------EGEYHADDLKKIQ---------CYICKSFGHLCCV 532
+S+ C +CG SGH C +G ++ Q CY C GH
Sbjct: 1 MSNKECFKCGRSGHWARGCPRGGGSQGHGARGRVRGSQCSSTNPSDICYRCGESGH---- 56
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
++ L + CYNCG+SGH+ +C ++ CY CG+ GH AR C
Sbjct: 57 HAKNCDLLEDICYNCGRSGHIAKDCIEP-----KREREQCCYTCGRPGHLARDC 105
>gi|147899284|ref|NP_001084082.1| cellular nucleic acid binding protein [Xenopus laevis]
gi|1055224|gb|AAA81168.1| cellular nucleic acid binding protein [Xenopus laevis]
Length = 168
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 45 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPRKEREQCCYNCGKPGHLARD 101
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ + CY C FGH+ +V CY CG++GH+ C+
Sbjct: 102 CD---HADEHR---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 142
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 143 -KTSEVNCYRCGESGHLAREC 162
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 43 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLAR 100
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ + C CG+ GH D K++CY C GH+ +N S
Sbjct: 101 DCDHADE------HRCYSCGEFGHIQK---------DCTKVKCYRCGETGHVA-INCSKT 144
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 145 --SEVNCYRCGESGHLAREC 162
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 21/111 (18%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ------------CYICKSFGHLCCVNSS 535
+SSN C +CG +GH C CY C GHL +
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRDICYRCGESGHL----AK 56
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
L++ +CYNCG+ GH+ +C K+ CY CGK GH AR C
Sbjct: 57 DCDLQEDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGHLARDC 102
>gi|50475|emb|CAA77897.1| cellular nucleic acid binding protein clone 14 [Mus musculus]
Length = 171
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 53/169 (31%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKG-SEHLAS 477
+ C CG+ H A C +Q +++ C+ CG H K+CK+ + C N G +HLA
Sbjct: 45 DICYRCGESGHLAKDCDLQ-EDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPDHLAR 103
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC HAD+ K CY C FGH+
Sbjct: 104 DCD------------------------------HADEQK---CYSCGEFGHI------QK 124
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+V CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 125 DCTKVKCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 165
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 395 KENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK 454
+E+EA YN + K +P + C NCGK +H A C + K C+ CG F
Sbjct: 63 QEDEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKPDHLARDCDHADEQK-CYSCGEFG 120
Query: 455 HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
H K+C + + C+ + H+A +C T + N C RCG+SGH
Sbjct: 121 HIQKDCTKVK-CYRCGETGHVAINCSKTSEVN------CYRCGESGH 160
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 26/115 (22%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG SGH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQ-VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK H AR C
Sbjct: 57 -AKDCDLQEDEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPDHLARDC 105
>gi|449266322|gb|EMC77386.1| Cellular nucleic acid-binding protein [Columba livia]
Length = 181
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 58 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 114
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 115 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 155
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 156 -KTSEVNCYRCGESGHLAREC 175
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 56 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 113
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 114 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 157
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 158 --SEVNCYRCGESGHLAREC 175
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 36/125 (28%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG--------------------------EYHADDLKKIQCY 521
+SSN C +CG +GH C ++ + L I CY
Sbjct: 1 MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAFFFSCYPFQAGFQFMSSSLPDI-CY 59
Query: 522 ICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
C GHL + L++ +CYNCG+ GH+ +C ++ CY CGK GH
Sbjct: 60 RCGESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGH 110
Query: 582 FARRC 586
AR C
Sbjct: 111 LARDC 115
>gi|395146534|gb|AFN53688.1| putative actin-depolymerizing factor 12 [Linum usitatissimum]
Length = 388
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 54/130 (41%), Gaps = 8/130 (6%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADD-LKKIQ 519
K G C+I K +H+A CP + CL C GH L C + D+ +
Sbjct: 70 KPGDSCYICKAVDHIAKLCPQKAEWER--DKICLLCRQRGHSLKRCPNKRDGDESVGAKL 127
Query: 520 CYICKSFGHLCCVNSSII---GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
CY C GH S I G K SC+ C + GHL +C + + K + C C
Sbjct: 128 CYNCGETGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPKGGS--CKIC 185
Query: 577 GKEGHFARRC 586
G H AR C
Sbjct: 186 GGVTHLARDC 195
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 447 CFLCGSFKHRWKNCKQGQD------CFINKGSEHLASDCPGTDQGN-NLSSNFCLRCGDS 499
C++C + H K C Q + C + + H CP G+ ++ + C CG++
Sbjct: 75 CYICKAVDHIAKLCPQKAEWERDKICLLCRQRGHSLKRCPNKRDGDESVGAKLCYNCGET 134
Query: 500 GHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPE 556
GH L++C K C++C GHL C N++ I K SC CG HL +
Sbjct: 135 GHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPKGGSCKICGGVTHLARD 194
Query: 557 CAN 559
C +
Sbjct: 195 CPD 197
>gi|354622939|ref|NP_001133217.2| zinc finger protein 9 [Salmo salar]
gi|221220712|gb|ACM09017.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 167
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 34/146 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H ++C+Q +D C+ S H++ DC P ++ C CG +GH
Sbjct: 44 CYRCGEQGHIARDCEQTEDACYNCHRSGHISRDCKEPKKER-----EQCCYSCGKAGHVA 98
Query: 504 SSCEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
C+ HA++ K CY C FGH LC +V CY CG+ GH+ +C+
Sbjct: 99 RDCD---HANEQK---CYSCGGFGHIQKLC---------DKVKCYRCGEIGHVAVQCS-- 141
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
K S + CYKCG GH A+ C
Sbjct: 142 ------KASEVNCYKCGNTGHLAKEC 161
>gi|198428174|ref|XP_002131234.1| PREDICTED: similar to universal minicircle sequence binding protein
(UMSBP), putative isoform 2 [Ciona intestinalis]
Length = 310
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 74/202 (36%), Gaps = 59/202 (29%)
Query: 421 NSETCSNCGKENHTAATCKM----------------QKQNKPCFLCGSFKHRWKNCKQGQ 464
+++ C CG H A C ++ N CF CG H ++C +
Sbjct: 108 DADVCYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSAE 167
Query: 465 D------------CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA 512
+ C+ HLA DCP N C +CG +GH C +
Sbjct: 168 NGRSRTGATNINTCYNCYKEGHLARDCP--------EDNACYKCGKAGHLARKCPEDADR 219
Query: 513 DDLKKI--------QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEAL 564
+ ++ QCY+C++ GH+ + +CY C GH+ +C N
Sbjct: 220 NGDARLNRREAGTKQCYLCQNVGHI------QANCPEATCYRCHGEGHIARDCPNG---- 269
Query: 565 NGKKSNLICYKCGKEGHFARRC 586
N CY C + GH AR C
Sbjct: 270 -----NEECYNCRRPGHKARDC 286
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 13/64 (20%)
Query: 544 CYNCGQSGHLGPECANSCEALNG-----------KKSNLICYKCGKEGHFARRCGSNFKD 592
CY CG GH EC N +A +G +++N C++CG+ GH AR C S
Sbjct: 112 CYKCGTPGHFARECPN--DAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSAENG 169
Query: 593 RLRI 596
R R
Sbjct: 170 RSRT 173
>gi|242076730|ref|XP_002448301.1| hypothetical protein SORBIDRAFT_06g024880 [Sorghum bicolor]
gi|241939484|gb|EES12629.1| hypothetical protein SORBIDRAFT_06g024880 [Sorghum bicolor]
Length = 275
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Query: 447 CFLCGSFKHRWKNCKQ------GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSG 500
CF+C S H K C + + C + + H +CP +GN FC CG+SG
Sbjct: 70 CFICKSTDHVAKACPEKALWDKNKICLLCRERGHSLKNCPDKSEGN--LKKFCYNCGESG 127
Query: 501 HDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
H LS C C+ICK GHL C N I K C CG+ HL C
Sbjct: 128 HSLSKCPKPIENGGTNFASCFICKQQGHLSKNCPENKHGIYPKGGCCKECGEVTHLARHC 187
Query: 558 AN 559
N
Sbjct: 188 PN 189
>gi|99907739|gb|ABF68760.1| CNBP mutant 36-163, partial [synthetic construct]
Length = 128
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 34/146 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H ++C+Q +D C+ S H++ DC P ++ C CG +GH
Sbjct: 5 CYRCGEQGHIARDCEQTEDACYNCHRSXHISRDCKEPKKER-----EQCCYNCGKAGHVA 59
Query: 504 SSCEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
C+ HA++ K CY C FGH LC +V CY CG+ GH+ +C+
Sbjct: 60 RDCD---HANEQK---CYSCGGFGHFQKLC---------DKVKCYRCGEIGHVAVQCS-- 102
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
K + + CY CGK GH AR C
Sbjct: 103 ------KATEVNCYNCGKTGHLARDC 122
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 55/136 (40%), Gaps = 35/136 (25%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C NC + H + CK K+ + Q C+ + H+A DC
Sbjct: 23 DACYNCHRSXHISRDCKEPKKERE-----------------QCCYNCGKAGHVARDC--- 62
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
D N C CG GH C+ K++CY C GH V +V
Sbjct: 63 DHANEQK---CYSCGGFGHFQKLCD---------KVKCYRCGEIGH---VAVQCSKATEV 107
Query: 543 SCYNCGQSGHLGPECA 558
+CYNCG++GHL +C+
Sbjct: 108 NCYNCGKTGHLARDCS 123
>gi|71654802|ref|XP_816013.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881113|gb|EAN94162.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 503
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 23/140 (16%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
S C C + H A TC + + CF CGS+ H + C CF + H ++DCP
Sbjct: 88 QSVECFQCHQRGHMAPTCPLTR----CFNCGSYGHSSQLCYSRPLCFHCSLAGHRSTDCP 143
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+G C RC + GH+++ C + C++C GHL +
Sbjct: 144 MKPKG-----RVCYRCKEPGHEMAECT--------QTALCHMCNQAGHL------VAQCP 184
Query: 541 QVSCYNCGQSGHLGPECANS 560
+ C C + GH C S
Sbjct: 185 EAVCNLCHERGHTASACLKS 204
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 64/175 (36%), Gaps = 42/175 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD------------CFINKG 471
TCSNC +H C + C CG H ++C + C
Sbjct: 20 TCSNCSATDHLRRDCPLVT----CRACGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGS 75
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
S H+ + CP Q S C +C GH +C +C+ C S+GH
Sbjct: 76 SRHVKASCPLRSQ-----SVECFQCHQRGHMAPTC---------PLTRCFNCGSYGH--- 118
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
SS + + C++C +GH +C K +CY+C + GH C
Sbjct: 119 --SSQLCYSRPLCFHCSLAGHRSTDCPM-------KPKGRVCYRCKEPGHEMAEC 164
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 420 WNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
++ C +C H + C M+ + + C+ C H C Q C + + HL + C
Sbjct: 124 YSRPLCFHCSLAGHRSTDCPMKPKGRVCYRCKEPGHEMAECTQTALCHMCNQAGHLVAQC 183
Query: 480 PGT------DQGNNLSSNFCLRC----GDSGHDLSSCEGEY----HAD 513
P ++G+ S+ CL+ + H + SCEG + HAD
Sbjct: 184 PEAVCNLCHERGHTASA--CLKSRFINYKAPHSIESCEGPFLVKEHAD 229
>gi|354622941|ref|NP_001135177.2| zinc finger protein 9 [Salmo salar]
gi|221219922|gb|ACM08622.1| Cellular nucleic acid-binding protein [Salmo salar]
gi|221219978|gb|ACM08650.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 164
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 30/144 (20%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H ++C+Q +D C+ S H++ DC + C CG +GH
Sbjct: 41 CYRCGEQGHIARDCEQTEDACYNCHRSGHISRDCK---EPKKEREQCCYSCGKAGHVARD 97
Query: 506 CEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCE 562
C+ HA++ K CY C FGH LC +V CY CG+ GH+ +C+
Sbjct: 98 CD---HANEQK---CYSCGGFGHIQKLC---------DKVKCYRCGEIGHVAVQCS---- 138
Query: 563 ALNGKKSNLICYKCGKEGHFARRC 586
K S + CYKCG GH A+ C
Sbjct: 139 ----KASEVNCYKCGNTGHLAKEC 158
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 488 LSSNFCLRCGDSGHDLSSC------EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
+SS+ C RCG GH + +C K + CY C GH+ + +
Sbjct: 3 MSSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHI----ARDCEQTE 58
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNC +SGH+ +C K+ CY CGK GH AR C
Sbjct: 59 DACYNCHRSGHISRDCKEP-----KKEREQCCYSCGKAGHVARDC 98
>gi|71651603|ref|XP_814476.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879451|gb|EAN92625.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 503
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 23/140 (16%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
S C C + H A TC + + CF CGS+ H + C CF + H ++DCP
Sbjct: 88 QSVECFQCHQRGHMAPTCPLTR----CFNCGSYGHSSQLCYSRPLCFHCSLAGHRSTDCP 143
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+G C RC + GH+++ C + C++C GHL +
Sbjct: 144 MKPKG-----RVCYRCKEPGHEMAECT--------QTALCHMCNQAGHL------VAQCP 184
Query: 541 QVSCYNCGQSGHLGPECANS 560
+ C C + GH C S
Sbjct: 185 EAVCNLCHERGHTASACLKS 204
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 64/175 (36%), Gaps = 42/175 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD------------CFINKG 471
TCSNC +H C + C CG H ++C + C
Sbjct: 20 TCSNCSATDHLRRDCPLVT----CRACGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGS 75
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
S H+ + CP Q S C +C GH +C +C+ C S+GH
Sbjct: 76 SRHVKASCPLRSQ-----SVECFQCHQRGHMAPTC---------PLTRCFNCGSYGH--- 118
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
SS + + C++C +GH +C K +CY+C + GH C
Sbjct: 119 --SSQLCYSRPLCFHCSLAGHRSTDCPM-------KPKGRVCYRCKEPGHEMAEC 164
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 420 WNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
++ C +C H + C M+ + + C+ C H C Q C + + HL + C
Sbjct: 124 YSRPLCFHCSLAGHRSTDCPMKPKGRVCYRCKEPGHEMAECTQTALCHMCNQAGHLVAQC 183
Query: 480 PGT------DQGNNLSSNFCLRC----GDSGHDLSSCEGEY----HAD 513
P ++G+ S+ CL+ + H + SCEG + HAD
Sbjct: 184 PEAVCNLCHERGHTASA--CLKSRFINYKAPHSIESCEGPFLVKEHAD 229
>gi|357444017|ref|XP_003592286.1| Zinc finger CCHC domain-containing protein [Medicago truncatula]
gi|355481334|gb|AES62537.1| Zinc finger CCHC domain-containing protein [Medicago truncatula]
Length = 262
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 447 CFLCGSFKHRWKNCKQGQD------CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSG 500
CF+C H K C Q + C + H A +CP D G+ +C CGD+G
Sbjct: 69 CFICKGLDHIAKFCTQKAEWEKNKICLRCRRRGHRAQNCP--DGGSKEDFKYCYNCGDNG 126
Query: 501 HDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
H L++C QC++CK GHL C N+ I K C CG HL +C
Sbjct: 127 HSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGGVTHLARDC 186
Query: 558 AN 559
+
Sbjct: 187 PD 188
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 67/164 (40%), Gaps = 16/164 (9%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K G CFI KG +H+A C T + + CLRC GH +C +D K C
Sbjct: 64 KPGDSCFICKGLDHIAKFC--TQKAEWEKNKICLRCRRRGHRAQNCPDGGSKEDFK--YC 119
Query: 521 YICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
Y C GH C G C+ C + GHL C + + K C CG
Sbjct: 120 YNCGDNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGG--CCKICG 177
Query: 578 KEGHFARRC---GSN-FKD---RLRISDLLFTAERPPTRARHFV 614
H AR C G N F D + + +LL T ERP + FV
Sbjct: 178 GVTHLARDCPDKGQNGFGDGRPKGPVHNLLRTDERPSGQVTKFV 221
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
Query: 425 CSNCGKENHTAATCKMQKQN-----KPCFLCGSFKHRWKNCKQ--------GQDCFINKG 471
C NCG H+ A C Q CF+C H KNC + G C I G
Sbjct: 119 CYNCGDNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGG 178
Query: 472 SEHLASDCPGTDQGNN 487
HLA DCP D+G N
Sbjct: 179 VTHLARDCP--DKGQN 192
>gi|310792827|gb|EFQ28288.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 454
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-PCFLCGSFKHRWKNC----KQGQDCFINKGSE--HLA 476
TC NCG+E H C + +K C CG H+ C K G D NK E H +
Sbjct: 274 TCYNCGEEGHRVRDCPTPRVDKFACKNCGQSGHKVSECTEPRKAGDDVECNKCHEMGHFS 333
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DCP QG C CG+ GH C + +KI+C C + GHL
Sbjct: 334 RDCP---QGGGGGGRACHNCGNEGHISRECP------EPRKIKCRNCDADGHLSKDCDKP 384
Query: 537 IGLKQVSCYNCGQSGHLGPECANS 560
+ + ++ C NCG+ GH C N
Sbjct: 385 VDVTRIKCNNCGEMGHKSYRCPNP 408
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C+ C + GH SC E I CY C GH + + + +C NCGQSGH
Sbjct: 248 CINCNELGHISKSCPQEAMEKARITITCYNCGEEGHR-VRDCPTPRVDKFACKNCGQSGH 306
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
EC +A + ++ C KC + GHF+R C
Sbjct: 307 KVSECTEPRKAGD----DVECNKCHEMGHFSRDC 336
>gi|225707608|gb|ACO09650.1| Cellular nucleic acid-binding protein [Osmerus mordax]
Length = 165
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 45/183 (24%)
Query: 421 NSETCSNCGKENHTAATC-----------KMQKQNKPCFLCGSFKHRWKNCKQGQD-CFI 468
+S C CG+ H C + + +++ C+ CG H ++C+Q +D C+
Sbjct: 5 SSSECFGCGRSGHWIKNCPNAGGRGRGRGRGRGKDQFCYRCGEQGHMARDCEQSEDACYN 64
Query: 469 NKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSF 526
+ H++ DC P ++ C CG +GH C+ HA++ K CY C F
Sbjct: 65 CHRTGHISRDCKEPKKER-----EQVCYSCGKAGHVARDCD---HANEQK---CYSCGGF 113
Query: 527 GH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
GH LC +V CY CG+ GH+ C+ K + + CY CGK GH A
Sbjct: 114 GHIQKLC---------DKVKCYRCGEIGHVAVHCS--------KSNEMNCYNCGKTGHLA 156
Query: 584 RRC 586
+ C
Sbjct: 157 KEC 159
>gi|407837810|gb|EKF99870.1| hypothetical protein TCSYLVIO_009208 [Trypanosoma cruzi]
Length = 503
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 24/152 (15%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
S C C + H A TC + + CF CGS+ H + C CF + H ++DCP
Sbjct: 88 QSVECFQCHQRGHMAPTCPLTR----CFNCGSYGHSAQLCYSRPLCFHCSLAGHRSTDCP 143
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+G C RC + GH+++ C + C++C GH I
Sbjct: 144 MKPKG-----RVCYRCKEPGHEMAECT--------QTALCHMCNQAGHF------IAQCP 184
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSNLI 572
+ C C + GH C S +N K + I
Sbjct: 185 EAVCNLCNERGHTSSACLKS-RFINYKAPHAI 215
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 62/175 (35%), Gaps = 41/175 (23%)
Query: 424 TCSNCGKENHTAATCKMQKQN---------KPCFLCGSFKHRWKNC---KQGQDCFINKG 471
TC +CG+ H C +K+ C CGS +H +C Q +CF
Sbjct: 38 TCRSCGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGSSRHVKASCPLRSQSVECFQCHQ 97
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
H+A CP T C CG GH C + C+ C GH
Sbjct: 98 RGHMAPTCPLTR---------CFNCGSYGHSAQLC--------YSRPLCFHCSLAGHR-- 138
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ K CY C + GH EC + +C+ C + GHF +C
Sbjct: 139 STDCPMKPKGRVCYRCKEPGHEMAECTQT----------ALCHMCNQAGHFIAQC 183
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 26/131 (19%)
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE----YHADDLKK 517
+G C ++HL DCP C CG GH C E +D +
Sbjct: 17 RGLTCSNCSATDHLRRDCPLVT---------CRSCGRLGHFKEDCPSEKKRARAEEDGEV 67
Query: 518 IQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
C C S H+ S + + V C+ C Q GH+ P C + C+ CG
Sbjct: 68 SVCRSCGSSRHV--KASCPLRSQSVECFQCHQRGHMAPTCPLT-----------RCFNCG 114
Query: 578 KEGHFARRCGS 588
GH A+ C S
Sbjct: 115 SYGHSAQLCYS 125
>gi|407399797|gb|EKF28436.1| hypothetical protein MOQ_007815 [Trypanosoma cruzi marinkellei]
Length = 509
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 23/137 (16%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
S C C + H A TC + + CF CGS+ H + C CF + H ++DCP
Sbjct: 94 QSVECFQCHQRGHMAPTCPLTR----CFNCGSYGHSSQLCYSRPLCFHCSLAGHRSTDCP 149
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+G C RC + GH+++ C + C++C GHL I
Sbjct: 150 MKPKG-----RVCYRCKEPGHEMAECT--------QTALCHMCNQAGHL------IAQCP 190
Query: 541 QVSCYNCGQSGHLGPEC 557
+ C C + GH C
Sbjct: 191 EAICNLCHERGHTASAC 207
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 63/170 (37%), Gaps = 42/170 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK------------QGQDCFINKG 471
TCSNC +H C + C CG H ++C + C
Sbjct: 26 TCSNCSATDHLRRDCPLVT----CRACGRLGHFKEDCPSENKRARAEEDGEVSVCRSCGS 81
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
S H+ + CP Q S C +C GH +C +C+ C S+GH
Sbjct: 82 SRHVKASCPLRSQ-----SVECFQCHQRGHMAPTC---------PLTRCFNCGSYGH--- 124
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
SS + + C++C +GH +C K +CY+C + GH
Sbjct: 125 --SSQLCYSRPLCFHCSLAGHRSTDCPM-------KPKGRVCYRCKEPGH 165
>gi|99907876|gb|ABF68761.1| CNBP mutant S158A, partial [synthetic construct]
Length = 163
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 34/146 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H ++C+Q +D C+ S H++ DC P ++ C CG +GH
Sbjct: 40 CYRCGEQGHIARDCEQTEDACYNCHRSXHISRDCKEPKKER-----EQCCYNCGKAGHVA 94
Query: 504 SSCEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
C+ HA++ K CY C FGH LC +V CY CG+ GH+ +C+
Sbjct: 95 RDCD---HANEQK---CYSCGGFGHFQKLC---------DKVKCYRCGEIGHVAVQCS-- 137
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
K + + CY CGK GH AR C
Sbjct: 138 ------KATEVNCYNCGKTGHLARDC 157
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 14/105 (13%)
Query: 487 NLSSNFCLRCGDSGHDLSSC-----EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
++S++ C CG SGH + +C K + CY C GH+ + +
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHI----ARDCEQTE 57
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNC +S H+ +C K+ CY CGK GH AR C
Sbjct: 58 DACYNCHRSXHISRDCKEP-----KKEREQCCYNCGKAGHVARDC 97
>gi|225470195|ref|XP_002268512.1| PREDICTED: uncharacterized protein LOC100242054 [Vitis vinifera]
Length = 401
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 57/143 (39%), Gaps = 26/143 (18%)
Query: 423 ETCSNCGKENHTAATCKMQKQ---NKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
E+C C ++H A C + Q +K C LC H KNC +KG E
Sbjct: 77 ESCFICKAKDHIAKHCPEKAQWERHKICLLCRQRGHSLKNCP-------DKGEE------ 123
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSI 536
L C CG++GH L++C K C+IC GHL C NS
Sbjct: 124 -------KLDKKLCYNCGETGHSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHG 176
Query: 537 IGLKQVSCYNCGQSGHLGPECAN 559
I K C CG HL +C N
Sbjct: 177 IYPKGGCCKICGGVTHLAKDCPN 199
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 63/154 (40%), Gaps = 15/154 (9%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC--EGEYHADDLKKI 518
K G+ CFI K +H+A CP Q CL C GH L +C +GE + L K
Sbjct: 74 KPGESCFICKAKDHIAKHCPEKAQWER--HKICLLCRQRGHSLKNCPDKGE---EKLDKK 128
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
CY C GH C G K SC+ C + GHL C + + K C
Sbjct: 129 LCYNCGETGHSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHGIYPKGG--CCKI 186
Query: 576 CGKEGHFARRC---GSNFKDRLRISDLLFTAERP 606
CG H A+ C G N I+ + ERP
Sbjct: 187 CGGVTHLAKDCPNKGCNNSPVAAIAGGIKHEERP 220
>gi|217073290|gb|ACJ85004.1| unknown [Medicago truncatula]
Length = 262
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 447 CFLCGSFKHRWKNCKQGQD------CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSG 500
CF+C H K C Q + C + H A +CP D G+ +C CGD+G
Sbjct: 69 CFICKGLDHIAKFCTQKAEWEKNKICVRCRRRGHRAQNCP--DGGSKEDFKYCYNCGDNG 126
Query: 501 HDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
H L++C QC++CK GHL C N+ I K C CG HL +C
Sbjct: 127 HSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGGVTHLARDC 186
Query: 558 AN 559
+
Sbjct: 187 PD 188
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 66/162 (40%), Gaps = 16/162 (9%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
G CFI KG +H+A C T + + C+RC GH +C +D K CY
Sbjct: 66 GDSCFICKGLDHIAKFC--TQKAEWEKNKICVRCRRRGHRAQNCPDGGSKEDFK--YCYN 121
Query: 523 CKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
C GH C G C+ C + GHL C + + K C CG
Sbjct: 122 CGDNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGG--CCKICGGV 179
Query: 580 GHFARRC---GSN-FKD---RLRISDLLFTAERPPTRARHFV 614
H AR C G N F D + + +LL T ERP + FV
Sbjct: 180 THLARDCPDKGQNGFGDGRPKGPVHNLLRTDERPSGQVTKFV 221
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
Query: 425 CSNCGKENHTAATCKMQKQN-----KPCFLCGSFKHRWKNCKQ--------GQDCFINKG 471
C NCG H+ A C Q CF+C H KNC + G C I G
Sbjct: 119 CYNCGDNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGG 178
Query: 472 SEHLASDCPGTDQGNN 487
HLA DCP D+G N
Sbjct: 179 VTHLARDCP--DKGQN 192
>gi|395146475|gb|AFN53632.1| actin-depolymerizing factor 12 [Linum usitatissimum]
Length = 359
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 54/130 (41%), Gaps = 8/130 (6%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADD-LKKIQ 519
K G C+I K +H+A CP + CL C GH L C + D+ +
Sbjct: 73 KPGDSCYICKAVDHIAKLCPQKAEWER--DKICLLCRQRGHSLKRCPNKRDGDESIGAKL 130
Query: 520 CYICKSFGHLCCVNSSII---GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
CY C GH S I G K SC+ C + GHL +C + + K + C C
Sbjct: 131 CYNCGETGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPKGGS--CKIC 188
Query: 577 GKEGHFARRC 586
G H AR C
Sbjct: 189 GGVTHLARDC 198
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 447 CFLCGSFKHRWKNCKQGQD------CFINKGSEHLASDCPGTDQGN-NLSSNFCLRCGDS 499
C++C + H K C Q + C + + H CP G+ ++ + C CG++
Sbjct: 78 CYICKAVDHIAKLCPQKAEWERDKICLLCRQRGHSLKRCPNKRDGDESIGAKLCYNCGET 137
Query: 500 GHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPE 556
GH L++C K C++C GHL C N++ I K SC CG HL +
Sbjct: 138 GHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPKGGSCKICGGVTHLARD 197
Query: 557 CAN 559
C +
Sbjct: 198 CPD 200
>gi|356534137|ref|XP_003535614.1| PREDICTED: uncharacterized protein LOC100804471 [Glycine max]
Length = 1241
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 31/172 (18%)
Query: 394 RKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQ---KQNKPCFLC 450
RK E K R LLR P PG E+C C +H A C + ++NK C C
Sbjct: 46 RKRPEPKPGSRKRHLLRVPGMK--PG---ESCFICKAMDHIAKLCPEKAEWEKNKICLRC 100
Query: 451 GSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEY 510
HR KNC + D G++ + +C CG++GH L+ C
Sbjct: 101 RRRGHRAKNCPEVLD-----GAK---------------DAKYCYNCGENGHALTQCLHPL 140
Query: 511 HADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
K +C++C GHL C N+ I K C CG HL +C +
Sbjct: 141 QEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGGVTHLAKDCPD 192
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 55/135 (40%), Gaps = 10/135 (7%)
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADD 514
R K G+ CFI K +H+A CP ++ + CLRC GH +C E A D
Sbjct: 62 RVPGMKPGESCFICKAMDHIAKLCP--EKAEWEKNKICLRCRRRGHRAKNCPEVLDGAKD 119
Query: 515 LKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL 571
K CY C GH C G K C+ C Q GHL C + + K
Sbjct: 120 AK--YCYNCGENGHALTQCLHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGG-- 175
Query: 572 ICYKCGKEGHFARRC 586
C CG H A+ C
Sbjct: 176 CCKICGGVTHLAKDC 190
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Query: 421 NSETCSNCGKENHTAATCKMQKQN-----KPCFLCGSFKHRWKNCKQ--------GQDCF 467
+++ C NCG+ H C Q CF+C H KNC Q G C
Sbjct: 119 DAKYCYNCGENGHALTQCLHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCK 178
Query: 468 INKGSEHLASDCPGTDQGNNLSSN 491
I G HLA DCP + ++++N
Sbjct: 179 ICGGVTHLAKDCPDKGKSGSVAAN 202
>gi|197632623|gb|ACH71035.1| zinc finger protein 9-2 [Salmo salar]
Length = 162
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 30/144 (20%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H ++C+Q +D C+ S H++ DC + C CG +GH
Sbjct: 39 CYRCGEQGHIARDCEQTEDACYNCHRSGHISRDCK---EPKKEREQCCYSCGKAGHVARD 95
Query: 506 CEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCE 562
C+ HA++ K CY C FGH LC +V CY CG+ GH+ +C+
Sbjct: 96 CD---HANEQK---CYSCGGFGHIQKLC---------DKVKCYRCGEIGHVAVQCS---- 136
Query: 563 ALNGKKSNLICYKCGKEGHFARRC 586
K S + CYKCG GH A+ C
Sbjct: 137 ----KASEVNCYKCGNTGHLAKEC 156
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 488 LSSNFCLRCGDSGHDLSSC------EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
+SS+ C RCG GH + +C K + CY C GH+ + +
Sbjct: 1 MSSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHI----ARDCEQTE 56
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNC +SGH+ +C K+ CY CGK GH AR C
Sbjct: 57 DACYNCHRSGHISRDCKEP-----KKEREQCCYSCGKAGHVARDC 96
>gi|115459840|ref|NP_001053520.1| Os04g0555800 [Oryza sativa Japonica Group]
gi|38345588|emb|CAD41641.2| OSJNBb0012E24.6 [Oryza sativa Japonica Group]
gi|113565091|dbj|BAF15434.1| Os04g0555800 [Oryza sativa Japonica Group]
Length = 277
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 54/143 (37%), Gaps = 27/143 (18%)
Query: 423 ETCSNCGKENHTAATCK---MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
E C C +H A C + ++NK C LC H KNC D
Sbjct: 70 ERCFICKAADHVAKVCPEKSLWEKNKICLLCRQRGHSLKNCPDKND-------------- 115
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSI 536
NL FC CG+SGH LS C K C++CK GHL C N
Sbjct: 116 ------ENLKK-FCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHG 168
Query: 537 IGLKQVSCYNCGQSGHLGPECAN 559
I K C CG+ HL C N
Sbjct: 169 IYPKGGCCKICGEVTHLAKHCPN 191
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 30/129 (23%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
+ G+ CFI K ++H+A CP ++ + CL C GH L +C + + ++LKK
Sbjct: 67 RPGERCFICKAADHVAKVCP--EKSLWEKNKICLLCRQRGHSLKNCP-DKNDENLKKF-- 121
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
CYNCG+SGH +C E NG C+ C ++G
Sbjct: 122 -----------------------CYNCGESGHSLSKCPKPIE--NGGTKFASCFVCKQQG 156
Query: 581 HFARRCGSN 589
H ++ C N
Sbjct: 157 HLSKNCPEN 165
>gi|197632621|gb|ACH71034.1| zinc finger protein 9-1 [Salmo salar]
Length = 165
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 30/144 (20%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H ++C+Q +D C+ S H++ DC + C CG +GH
Sbjct: 42 CYRCGEQGHIARDCEQTEDACYNCHRSGHISRDCK---EPKKEREQCCYSCGKAGHVARD 98
Query: 506 CEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCE 562
C+ HA++ K CY C FGH LC +V CY CG+ GH+ +C+
Sbjct: 99 CD---HANEQK---CYSCGGFGHIQKLC---------DKVKCYRCGEIGHVAVQCS---- 139
Query: 563 ALNGKKSNLICYKCGKEGHFARRC 586
K S + CYKCG GH A+ C
Sbjct: 140 ----KASEVNCYKCGNTGHLAKEC 159
>gi|300122852|emb|CBK23859.2| unnamed protein product [Blastocystis hominis]
Length = 158
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQ 549
C CG+ GH C ++++ + ++CYIC FGH+ C S ++ +CYNCG+
Sbjct: 3 CYVCGEKGHKARDCPNRENSNNERPVKCYICGGFGHISRDC--PSESGNRRETTCYNCGK 60
Query: 550 SGHLGPECA-NSCEALNGKKSN-LICYKCGKEGHFARRCGSNF 590
GH+ +C +N ++S +IC KC +EGH AR C ++
Sbjct: 61 PGHISRDCPEEHTHPVNPQRSRVIICRKCNQEGHIARDCPNDI 103
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 29/152 (19%)
Query: 447 CFLCGSFKHRWKNCKQGQD--------CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGD 498
C++CG H+ ++C ++ C+I G H++ DCP ++ GN + C CG
Sbjct: 3 CYVCGEKGHKARDCPNRENSNNERPVKCYICGGFGHISRDCP-SESGNRRETT-CYNCGK 60
Query: 499 SGHDLSSCEGEY-HADDLKK---IQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLG 554
GH C E+ H + ++ I C C GH+ + + C+NC Q+GH+
Sbjct: 61 PGHISRDCPEEHTHPVNPQRSRVIICRKCNQEGHI-----ARDCPNDIVCHNCHQAGHVA 115
Query: 555 PECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+C N EAL C+ C + GH AR C
Sbjct: 116 RDCPN--EAL--------CHNCNQPGHLARNC 137
>gi|58004785|gb|AAW62455.1| cellular nucleic acid binding protein mutant H128Q [synthetic
construct]
Length = 178
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPRKEREQCCYNCGKPGHLARD 111
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
CE HAD+ K CY C FG + +V CY CG +GH+ C+
Sbjct: 112 CE---HADEQK---CYSCGEFGQI------QKDCTKVKCYRCGDTGHVAINCS------- 152
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 153 -KTSEVNCYRCGESGHLAREC 172
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 64/140 (45%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 53 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLAR 110
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ G D K++CY C GH+ +N S
Sbjct: 111 DCEHADEQK------CYSCGEFGQI---------QKDCTKVKCYRCGDTGHVA-INCSKT 154
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 155 --SEVNCYRCGESGHLAREC 172
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----------------------EGEYHADDLKKIQCYICK 524
+SSN C +CG +GH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDI-CYRCG 59
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GHL + L++ +CYNCG+ GH+ +C K+ CY CGK GH AR
Sbjct: 60 ESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGHLAR 110
Query: 585 RC 586
C
Sbjct: 111 DC 112
>gi|7263178|gb|AAF44118.1| cellular nucleic acid binding protein mutant H107Q [synthetic
construct]
Length = 178
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG G
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPRKEREQCCYNCGKPGQLARD 111
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
CE HAD+ K CY C FGH+ +V CY CG +GH+ C+
Sbjct: 112 CE---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGDTGHVAINCS------- 152
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 153 -KTSEVNCYRCGESGHLAREC 172
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 64/140 (45%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G LA
Sbjct: 53 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGQLAR 110
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 111 DCEHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGDTGHVA-INCSKT 154
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 155 --SEVNCYRCGESGHLAREC 172
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 33/122 (27%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----------------------EGEYHADDLKKIQCYICK 524
+SSN C +CG +GH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDI-CYRCG 59
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GHL + L++ +CYNCG+ GH+ +C K+ CY CGK G AR
Sbjct: 60 ESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGQLAR 110
Query: 585 RC 586
C
Sbjct: 111 DC 112
>gi|347921162|ref|NP_001231665.1| zinc finger protein 9 [Danio rerio]
gi|347921635|ref|NP_956043.2| zinc finger protein 9 [Danio rerio]
Length = 163
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 34/146 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H ++C+Q +D C+ S H++ DC P ++ C CG +GH
Sbjct: 40 CYRCGEQGHIARDCEQTEDACYNCHRSGHISRDCKEPKKER-----EQCCYNCGKAGHVA 94
Query: 504 SSCEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
C+ HA++ K CY C FGH LC +V CY CG+ GH+ +C+
Sbjct: 95 RDCD---HANEQK---CYSCGGFGHIQKLC---------DKVKCYRCGEIGHVAVQCS-- 137
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
K + + CY CGK GH AR C
Sbjct: 138 ------KATEVNCYNCGKTGHLARDC 157
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 14/105 (13%)
Query: 487 NLSSNFCLRCGDSGHDLSSC-----EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
++S++ C CG SGH + +C K + CY C GH+ + +
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHI----ARDCEQTE 57
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNC +SGH+ +C K+ CY CGK GH AR C
Sbjct: 58 DACYNCHRSGHISRDCKEP-----KKEREQCCYNCGKAGHVARDC 97
>gi|254569694|ref|XP_002491957.1| RING finger protein that interacts with the arginine
methyltransferase Hmt1p [Komagataella pastoris GS115]
gi|238031754|emb|CAY69677.1| RING finger protein that interacts with the arginine
methyltransferase Hmt1p [Komagataella pastoris GS115]
gi|328351548|emb|CCA37947.1| Gag-Pol polyprotein Contains: RecName: Full=Matrix protein p17;
Contains: RecName: Full=Capsid protein p24; Contains:
RecName: Full=Spacer peptide p2; Contains: RecName:
Full=Nucleocapsid protein p7; Contains: RecName:
Full=Transframe peptide; Contains: RecName: Full=p6-pol;
Short=p6*; Contains: RecName: Full=Protease
[Komagataella pastoris CBS 7435]
Length = 280
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 23/175 (13%)
Query: 384 IEAKDKVEDARKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQ 443
+ K KV R E+ + L + + RYF + C+NC ++ H CK+
Sbjct: 6 VAPKGKVFSLRMEDVNENPEELVAMRGEGRYFGVTDTHETICANCHRKGHKRQQCKVVV- 64
Query: 444 NKPCFLCGSFK-HRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHD 502
C CG+ H + C Q C I H ++CP D+G + +++C C H
Sbjct: 65 ---CHSCGAVDDHYYTQCPQSVVCSICGTKGHFRNNCP--DKGK-MRNSYCRVCDSRAHS 118
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
C + +CYI IG+ Q+ CYNCG GH G EC
Sbjct: 119 SDRCPTIW--------RCYITIK-------TKDKIGMPQIWCYNCGSKGHFGDEC 158
>gi|58802483|gb|AAW82446.1| cellular nucleic acid-binding protein [Carassius gibelio]
Length = 163
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 30/144 (20%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H ++C+Q +D C+ S H++ DC + S C CG +GH
Sbjct: 40 CYRCGEQGHIARDCEQTEDACYNCHRSGHISRDCKEPKKEREQS---CYNCGKAGHVARD 96
Query: 506 CEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCE 562
C+ H ++ K CY C FGH LC +V CY CG+ GH+ +C+
Sbjct: 97 CD---HGNEQK---CYSCGGFGHIQKLC---------DKVKCYRCGEIGHVAVQCS---- 137
Query: 563 ALNGKKSNLICYKCGKEGHFARRC 586
K + + CY CGK GH AR C
Sbjct: 138 ----KATEVNCYNCGKTGHLAREC 157
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 25/138 (18%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHLASDC 479
C CG++ H A C ++ C+ C H ++CK+ Q C+ + H+A DC
Sbjct: 40 CYRCGEQGHIARDC--EQTEDACYNCHRSGHISRDCKEPKKEREQSCYNCGKAGHVARDC 97
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
D GN C CG GH C+ K++CY C GH V
Sbjct: 98 ---DHGNEQK---CYSCGGFGHIQKLCD---------KVKCYRCGEIGH---VAVQCSKA 139
Query: 540 KQVSCYNCGQSGHLGPEC 557
+V+CYNCG++GHL EC
Sbjct: 140 TEVNCYNCGKTGHLAREC 157
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 14/105 (13%)
Query: 487 NLSSNFCLRCGDSGHDLSSC-----EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
++S++ C CG SGH + +C K + CY C GH+ + +
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHI----ARDCEQTE 57
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNC +SGH+ +C K+ CY CGK GH AR C
Sbjct: 58 DACYNCHRSGHISRDCKEP-----KKEREQSCYNCGKAGHVARDC 97
>gi|317137775|ref|XP_001727944.2| cellular nucleic acid-binding protein [Aspergillus oryzae RIB40]
Length = 171
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 71/178 (39%), Gaps = 37/178 (20%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG + H + C + + KPC+ C G H+
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTVAPKEKPCYRC-------------------SGVGHI 62
Query: 476 ASDCPGTDQGNNLSSNF----CLRCGDSGHDLSSCE---GEYHADDLKKIQCYICKSFGH 528
+ DCP G+ S C +CG GH +C ++ CY C GH
Sbjct: 63 SRDCPQAPSGDGYSGATGGQECYKCGHVGHIARNCSQGGYSGDGYGGRQHTCYSCGGHGH 122
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ G K CYNCG+ GH+ +C + EA + +CYKC + GH C
Sbjct: 123 M--ARDCTHGQK---CYNCGEVGHVSRDCPS--EA----RGERVCYKCKQPGHVQAAC 169
>gi|212721230|ref|NP_001132383.1| actin depolymerizing factor [Zea mays]
gi|194694234|gb|ACF81201.1| unknown [Zea mays]
gi|414585937|tpg|DAA36508.1| TPA: actin depolymerizing factor [Zea mays]
Length = 276
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Query: 447 CFLCGSFKHRWKNCKQG------QDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSG 500
CF+C S H K C + + C + + H +CP +GN + FC CG+SG
Sbjct: 71 CFICKSTDHVAKACPEKALWDKKKICLLCRERGHSLKNCPDKSEGNLMK--FCYNCGESG 128
Query: 501 HDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
H LS C C+IC GHL C N I K C CG+ HL C
Sbjct: 129 HSLSKCPKPIENGGTNFASCFICNQQGHLSKNCPENKHGIYPKGGCCKVCGEVTHLARHC 188
Query: 558 AN 559
N
Sbjct: 189 PN 190
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 451 GSFKH--RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG 508
G FKH R + G+ CFI K ++H+A CP ++ CL C + GH L +C
Sbjct: 54 GRFKHPLRVPGMRPGERCFICKSTDHVAKACP--EKALWDKKKICLLCRERGHSLKNCPD 111
Query: 509 EYHADDLKKIQCYICKSFGHLCCVNSSII---GLKQVSCYNCGQSGHLGPECANSCEALN 565
+ + +K CY C GH I G SC+ C Q GHL C + +
Sbjct: 112 KSEGNLMK--FCYNCGESGHSLSKCPKPIENGGTNFASCFICNQQGHLSKNCPENKHGIY 169
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K C CG+ H AR C
Sbjct: 170 PKGG--CCKVCGEVTHLARHC 188
>gi|432865749|ref|XP_004070594.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Oryzias latipes]
gi|432865751|ref|XP_004070595.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Oryzias latipes]
Length = 166
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 34/146 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H ++C Q +D C+ S H++ DC P ++ C CG +GH
Sbjct: 43 CYRCGDQGHMARDCDQTEDACYNCHRSGHISRDCKEPKKER-----EQLCYTCGKAGHMA 97
Query: 504 SSCEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
C+ HA++ K CY C FGH LC +V CY CG+ GH+ C+
Sbjct: 98 RDCD---HANEQK---CYSCGGFGHIQKLC---------DKVKCYRCGEIGHVAVHCS-- 140
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
K S CY CGK GH A+ C
Sbjct: 141 ------KASETNCYNCGKAGHLAKEC 160
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 17/107 (15%)
Query: 488 LSSNF-CLRCGDSGHDLSSC-------EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
+SSN C CG GH + C K++ CY C GH+ +
Sbjct: 3 MSSNSECFGCGRPGHWVKHCPNASGTRGRGRGRGRGKELFCYRCGDQGHM----ARDCDQ 58
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +CYNC +SGH+ +C K+ +CY CGK GH AR C
Sbjct: 59 TEDACYNCHRSGHISRDCKEP-----KKEREQLCYTCGKAGHMARDC 100
>gi|48374972|gb|AAT42170.1| putative actin depolymerizing factor [Sorghum bicolor]
Length = 463
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 22/160 (13%)
Query: 451 GSFKH--RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG 508
G FKH R + G+ CFI K ++H+A CP ++ + CL C + GH L +C
Sbjct: 53 GRFKHPLRVPGMRPGERCFICKSTDHVAKACP--EKALWDKNKICLLCRERGHSLKNCPD 110
Query: 509 EYHADDLKKIQCYICKSFGHLCC----------VNSSII----GLKQVSCYNCGQSGHLG 554
+ +LKK CY C GH +SI+ G SC+ C Q GHL
Sbjct: 111 KSEG-NLKKF-CYNCGESGHSLSKCPKPIENGNPRASIVDISGGTNFASCFICKQQGHLS 168
Query: 555 PECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRL 594
C + + K C +CG+ H AR C + K L
Sbjct: 169 KNCPENKHGIYPKGG--CCKECGEVTHLARHCPNKGKQDL 206
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 53/133 (39%), Gaps = 22/133 (16%)
Query: 447 CFLCGSFKHRWKNCKQ------GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSG 500
CF+C S H K C + + C + + H +CP +GN FC CG+SG
Sbjct: 70 CFICKSTDHVAKACPEKALWDKNKICLLCRERGHSLKNCPDKSEGN--LKKFCYNCGESG 127
Query: 501 HDLSSCEGEYHADDLKK-----------IQCYICKSFGHL---CCVNSSIIGLKQVSCYN 546
H LS C + + C+ICK GHL C N I K C
Sbjct: 128 HSLSKCPKPIENGNPRASIVDISGGTNFASCFICKQQGHLSKNCPENKHGIYPKGGCCKE 187
Query: 547 CGQSGHLGPECAN 559
CG+ HL C N
Sbjct: 188 CGEVTHLARHCPN 200
>gi|34784873|gb|AAH56793.1| Zinc finger protein 9 [Danio rerio]
Length = 161
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 34/146 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H ++C+Q +D C+ S H++ DC P ++ C CG +GH
Sbjct: 38 CYRCGEQGHIARDCEQTEDACYNCHRSGHISRDCKEPKKER-----EQCCYNCGKAGHVA 92
Query: 504 SSCEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
C+ HA++ K CY C FGH LC +V CY CG+ GH+ +C+
Sbjct: 93 RDCD---HANEQK---CYSCGGFGHIQKLC---------DKVKCYRCGEIGHVAVQCS-- 135
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
K + + CY CGK GH AR C
Sbjct: 136 ------KATEVNCYNCGKTGHLARDC 155
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 14/104 (13%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
+S++ C CG SGH + +C K + CY C GH+ + +
Sbjct: 1 MSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHI----ARDCEQTED 56
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNC +SGH+ +C K+ CY CGK GH AR C
Sbjct: 57 ACYNCHRSGHISRDCKEP-----KKEREQCCYNCGKAGHVARDC 95
>gi|74835178|dbj|BAE44472.1| Vasa [Botryllus primigenus]
Length = 687
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H++ DCP + G + C +CG+ GH C D + C+ C GH+ C
Sbjct: 62 HMSRDCP--NGGGSSRPKGCFKCGEEGHMSRDCPN--GGGDSRPKGCFKCGEEGHMSRDC 117
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCE----ALNGKKSNLICYKCGKEGHFARRC 586
N + C+ CG+ GH+ +C N E + ++ C+KCG+EGHF+R C
Sbjct: 118 PNGGGDS-RPKGCFKCGEEGHMSRDCPNGGEGGSRSQGDRQKGSGCFKCGEEGHFSREC 175
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG+ GH+ +C N G C+KCG+EGH +R C
Sbjct: 54 CYKCGEEGHMSRDCPNG----GGSSRPKGCFKCGEEGHMSRDC 92
>gi|254210302|gb|AAO73520.2| cellular nucleic acid-binding protein [Danio rerio]
Length = 163
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 34/146 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H ++C+Q +D C+ S H++ DC P ++ C CG +GH
Sbjct: 40 CYRCGEQGHIARDCEQTEDACYNCHRSGHISRDCKEPKKER-----EQCCYNCGKAGHVA 94
Query: 504 SSCEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
C+ HA++ K CY C FGH LC +V CY CG+ GH+ +C+
Sbjct: 95 RDCD---HANEQK---CYSCGGFGHFQKLC---------DKVKCYRCGEIGHVAVQCS-- 137
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
K + + CY CGK GH AR C
Sbjct: 138 ------KATEVNCYNCGKTGHLARDC 157
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 14/105 (13%)
Query: 487 NLSSNFCLRCGDSGHDLSSC-----EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
++S++ C CG SGH + +C K + CY C GH+ + +
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHI----ARDCEQTE 57
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNC +SGH+ +C K+ CY CGK GH AR C
Sbjct: 58 DACYNCHRSGHISRDCKEP-----KKEREQCCYNCGKAGHVARDC 97
>gi|156065913|ref|XP_001598878.1| hypothetical protein SS1G_00967 [Sclerotinia sclerotiorum 1980]
gi|154691826|gb|EDN91564.1| hypothetical protein SS1G_00967 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 394
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 71/197 (36%), Gaps = 46/197 (23%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASDC 479
C CG H A C ++ LC + H C + + C+ +G H+ +DC
Sbjct: 181 CYKCGNVGHYAEVCASAER-----LCYNLGHESNGCPLPRTTEAKQCYHCQGLGHVQADC 235
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGE--------------------------YHAD 513
P ++ C CG GH +C A
Sbjct: 236 PTLRISGAGTTGRCYNCGMPGHLARACPNPNNGMPGAPRGLGAPRGGFGGGFAPRGGFAG 295
Query: 514 DLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL 571
+ CY C H C S+ V CY CG+ GH +C++ +N K+
Sbjct: 296 GPRPATCYKCGGPNHFARDCQASA------VKCYACGKIGHTSRDCSSPNGGVN--KAGK 347
Query: 572 ICYKCGKEGHFARRCGS 588
ICY CG EGH AR C S
Sbjct: 348 ICYTCGTEGHVARDCPS 364
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 50/142 (35%), Gaps = 41/142 (28%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEG----------EYHADDLKKI----QCYICKSFGHLC- 530
++LS C +CG+ GH C E + L + QCY C+ GH+
Sbjct: 174 SSLSRRACYKCGNVGHYAEVCASAERLCYNLGHESNGCPLPRTTEAKQCYHCQGLGHVQA 233
Query: 531 -CVNSSIIGLKQVS-CYNCGQSGHLGPECANSCEALNGKKSNL----------------- 571
C I G CYNCG GHL C N + G L
Sbjct: 234 DCPTLRISGAGTTGRCYNCGMPGHLARACPNPNNGMPGAPRGLGAPRGGFGGGFAPRGGF 293
Query: 572 -------ICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 294 AGGPRPATCYKCGGPNHFARDC 315
>gi|9955402|dbj|BAB12217.1| vasa homolog [Ciona savignyi]
Length = 770
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 16/158 (10%)
Query: 443 QNKPCFLCGSFKHRWKNCKQGQD------CFINKGSEHLASDCPGTDQGNNLSSNFCLRC 496
++K CF CG H + C QG CF H++ +CP G C +C
Sbjct: 104 RSKGCFKCGEEGHMSRECPQGGGGSRGKGCFKCGEEGHMSRECPKGGGGGGGGGRGCFKC 163
Query: 497 GDSGHDLSSCE--GEYHADDLKKIQ-CYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSG 551
G+ GH C G+ + + + C+ C GH+ C + C+ CG+ G
Sbjct: 164 GEEGHMSRECPKGGDSGFEGRSRSKGCFKCGEEGHMSRECPQGGGG-GRGSGCFKCGEEG 222
Query: 552 HLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
H+ EC G C+KCG+EGH +R C N
Sbjct: 223 HMSRECPQG----GGGGRGSGCFKCGEEGHMSRECPRN 256
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 19/165 (11%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKP---CFLCGSFKHRWKNCKQGQD--------CFINK 470
S+ C CG+E H + C CF CG H + C +G CF
Sbjct: 105 SKGCFKCGEEGHMSRECPQGGGGSRGKGCFKCGEEGHMSRECPKGGGGGGGGGRGCFKCG 164
Query: 471 GSEHLASDCP-GTDQG--NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFG 527
H++ +CP G D G S C +CG+ GH C + C+ C G
Sbjct: 165 EEGHMSRECPKGGDSGFEGRSRSKGCFKCGEEGHMSRECP--QGGGGGRGSGCFKCGEEG 222
Query: 528 HLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSN 570
H+ C + C+ CG+ GH+ EC + G+KS+
Sbjct: 223 HMSRECPQGGGG-GRGSGCFKCGEEGHMSRECPRNTSGEGGEKSD 266
>gi|348502965|ref|XP_003439037.1| PREDICTED: cellular nucleic acid-binding protein-like [Oreochromis
niloticus]
Length = 166
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 34/146 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H ++C Q +D C+ S H++ DC P ++ C CG +GH
Sbjct: 43 CYRCGDQGHMARDCDQTEDACYNCHRSGHISRDCKEPKKER-----EQLCYTCGKAGHMA 97
Query: 504 SSCEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
C+ HA++ K CY C FGH LC +V CY CG+ GH+ C+
Sbjct: 98 RDCD---HANEQK---CYSCGGFGHIQKLC---------DKVKCYRCGEIGHVAVHCS-- 140
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
K S CY CGK GH A+ C
Sbjct: 141 ------KASETNCYNCGKAGHLAKEC 160
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 488 LSSNF-CLRCGDSGHDLSSC-------EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
+SSN C CG SGH + C K++ CY C GH+ +
Sbjct: 3 MSSNSECFGCGRSGHWVKHCPNASGSRGRGRGRGRGKELFCYRCGDQGHM----ARDCDQ 58
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +CYNC +SGH+ +C K+ +CY CGK GH AR C
Sbjct: 59 TEDACYNCHRSGHISRDCKEP-----KKEREQLCYTCGKAGHMARDC 100
>gi|413942254|gb|AFW74903.1| hypothetical protein ZEAMMB73_929566 [Zea mays]
Length = 647
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 52/118 (44%), Gaps = 18/118 (15%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL--CCVNSSIIGLKQVSCYNCGQS 550
C CG GH SSC + D + +CY C + GHL C N +++ CY CG +
Sbjct: 375 CYECGTPGHFSSSCPNK---KDSEARKCYECGTPGHLSSACPNKKDSEVRK--CYECGTA 429
Query: 551 GHLGPECA----------NSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISD 598
GHL C NS + K CY+CG GH + C N KD ISD
Sbjct: 430 GHLSSACPNKKDSDEKEDNSNSTIAASKKRRTCYECGIPGHLSSNC-PNKKDPEFISD 486
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 67/182 (36%), Gaps = 52/182 (28%)
Query: 422 SETCSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
+ TC CG H +++C +K + + C+ CG+ H C +D + K
Sbjct: 372 TRTCYECGTPGHFSSSCPNKKDSEARKCYECGTPGHLSSACPNKKDSEVRK--------- 422
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
C CG +GH S+C + +D+ + NS+I
Sbjct: 423 -------------CYECGTAGHLSSACPNKKDSDEKEDNS-------------NSTIAAS 456
Query: 540 KQ-VSCYNCGQSGHLGPECANSCE--------------ALNGKKSNLICYKCGKEGHFAR 584
K+ +CY CG GHL C N + A K CY+CG GH +
Sbjct: 457 KKRRTCYECGIPGHLSSNCPNKKDPEFISDEKNTNVDSAPASSKKRRTCYECGTPGHLSS 516
Query: 585 RC 586
C
Sbjct: 517 AC 518
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 70/199 (35%), Gaps = 46/199 (23%)
Query: 430 KENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDC-FINKGSEHLASDCPGTDQGNNL 488
KE+++ +T K+ + C+ CG H NC +D FI+ P + +
Sbjct: 445 KEDNSNSTIAASKKRRTCYECGIPGHLSSNCPNKKDPEFISDEKNTNVDSAPASSKKRRT 504
Query: 489 SSNFCLRCGDSGHDLSSCEGEYHADDL--------KKIQCYICKSFGHLCCVNSSIIGLK 540
C CG GH S+C + ++ + K I ++S+ K
Sbjct: 505 ----CYECGTPGHLSSACPNKRTSESVLNNREPADAKPATTIKPEETKAGDESNSVASKK 560
Query: 541 QVSCYNCGQSGHLGPECANS------C-EALNGKKSNLI--------------------- 572
+ CY CG SGHL C + C E G SN +
Sbjct: 561 RRKCYECGISGHLSSACPSKKAAEPVCNEEKPGNHSNAVLPVVSDEKKASEDAKSAPAKK 620
Query: 573 -----CYKCGKEGHFARRC 586
CY+CG GH + C
Sbjct: 621 KKRRTCYECGIAGHLSSEC 639
>gi|432865753|ref|XP_004070596.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Oryzias latipes]
Length = 164
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 34/146 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG H ++C Q +D C+ S H++ DC P ++ C CG +GH
Sbjct: 41 CYRCGDQGHMARDCDQTEDACYNCHRSGHISRDCKEPKKER-----EQLCYTCGKAGHMA 95
Query: 504 SSCEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
C+ HA++ K CY C FGH LC +V CY CG+ GH+ C+
Sbjct: 96 RDCD---HANEQK---CYSCGGFGHIQKLC---------DKVKCYRCGEIGHVAVHCS-- 138
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
K S CY CGK GH A+ C
Sbjct: 139 ------KASETNCYNCGKAGHLAKEC 158
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 488 LSSNF-CLRCGDSGHDLSSC-----EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
+SSN C CG GH + C +++ CY C GH+ + +
Sbjct: 3 MSSNSECFGCGRPGHWVKHCPNASGTRGRGRGRGRELFCYRCGDQGHM----ARDCDQTE 58
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNC +SGH+ +C K+ +CY CGK GH AR C
Sbjct: 59 DACYNCHRSGHISRDCKEP-----KKEREQLCYTCGKAGHMARDC 98
>gi|7263180|gb|AAF44119.1| cellular nucleic acid binding protein mutant H128D [synthetic
construct]
Length = 178
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCK---EPRKEREQCCYNCGKPGHLARD 111
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
CE HAD+ K CY C FG + +V CY CG +GH+ C+
Sbjct: 112 CE---HADEQK---CYSCGEFGDI------QKDCTKVKCYRCGDTGHVAINCS------- 152
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 153 -KTSEVNCYRCGESGHLAREC 172
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 53 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLAR 110
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ G D+ D K++CY C GH+ +N S
Sbjct: 111 DCEHADEQK------CYSCGEFG-DIQK--------DCTKVKCYRCGDTGHVA-INCSKT 154
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 155 --SEVNCYRCGESGHLAREC 172
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----------------------EGEYHADDLKKIQCYICK 524
+SSN C +CG +GH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDI-CYRCG 59
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GHL + L++ +CYNCG+ GH+ +C K+ CY CGK GH AR
Sbjct: 60 ESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGHLAR 110
Query: 585 RC 586
C
Sbjct: 111 DC 112
>gi|58004789|gb|AAW62456.1| cellular nucleic acid binding protein mutant H128A [synthetic
construct]
Length = 178
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPRKEREQCCYNCGKPGHLARD 111
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
CE HAD+ K CY C FG + +V CY CG +GH+ C+
Sbjct: 112 CE---HADEQK---CYSCGEFGAI------QKDCTKVKCYRCGDTGHVAINCS------- 152
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 153 -KTSEVNCYRCGESGHLAREC 172
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 64/140 (45%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ H A C +Q+ C+ CG H K+CK+ + C N G HLA
Sbjct: 53 DICYRCGESGHLAKDCDLQED--ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLAR 110
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ G D K++CY C GH+ +N S
Sbjct: 111 DCEHADEQK------CYSCGEFGAI---------QKDCTKVKCYRCGDTGHVA-INCSKT 154
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 155 --SEVNCYRCGESGHLAREC 172
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----------------------EGEYHADDLKKIQCYICK 524
+SSN C +CG +GH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDI-CYRCG 59
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GHL + L++ +CYNCG+ GH+ +C K+ CY CGK GH AR
Sbjct: 60 ESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGHLAR 110
Query: 585 RC 586
C
Sbjct: 111 DC 112
>gi|335306205|ref|XP_001926395.3| PREDICTED: cellular nucleic acid-binding protein-like [Sus scrofa]
Length = 171
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H KNC +D N G S H+A DC + C CG GH
Sbjct: 48 CYRCGEPGHHAKNCDLQEDICYNCGKSGHIAKDC---MEPKRERDQCCYTCGRPGHLARD 104
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C D ++ +CY C GH+ QV CY CG++GH+ C+
Sbjct: 105 C------DRQEEQKCYSCGERGHI------QKDCTQVRCYRCGETGHVAINCS------- 145
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 146 -KPSEVNCYRCGESGHLAREC 165
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 25/138 (18%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC-----KQGQDCFINKGSEHLASDC 479
C CG+ H A C +Q+ C+ CG H K+C ++ Q C+ HLA DC
Sbjct: 48 CYRCGEPGHHAKNCDLQEDI--CYNCGKSGHIAKDCMEPKRERDQCCYTCGRPGHLARDC 105
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
+ C CG+ GH D +++CY C GH+ +N S
Sbjct: 106 ------DRQEEQKCYSCGERGHI---------QKDCTQVRCYRCGETGHVA-INCS--KP 147
Query: 540 KQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 148 SEVNCYRCGESGHLAREC 165
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 24/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSCE---------------GEYHADDLKKIQCYICKSFGHLCCV 532
+S+ C +CG SGH C G + + I CY C GH
Sbjct: 1 MSNKECFKCGRSGHWARGCPKGGGARGRGSRGRGRGPHCSSTTLPIICYRCGEPGH---- 56
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
++ L++ CYNCG+SGH+ +C ++ + CY CG+ GH AR C
Sbjct: 57 HAKNCDLQEDICYNCGKSGHIAKDCMEP-----KRERDQCCYTCGRPGHLARDC 105
>gi|242089287|ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
gi|241945761|gb|EES18906.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
Length = 669
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 67/165 (40%), Gaps = 25/165 (15%)
Query: 483 DQGN--NLSSN--FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
D GN NL S C CG GH SSC + +D K CY C + GHL +
Sbjct: 379 DNGNSDNLKSKNRTCYECGTPGHFSSSCPNKKDSDVRK---CYECGTPGHLSSACPNKKD 435
Query: 539 LKQVSCYNCGQSGHLGPECANSCEA--------------LNGKKSNLICYKCGKEGHFAR 584
+ CY CG GHL C N ++ + K CY+CG GH +
Sbjct: 436 SEARKCYECGTPGHLSSACPNKKDSDVISDEKDANANSAIAASKKRRTCYECGIPGHLSS 495
Query: 585 RCGSNFKDRLRISDLLFT---AERPPTRARHFVGSNGTPHGLGNA 626
C N KD ISD T + P++ R GTP L +A
Sbjct: 496 SC-PNKKDSEFISDEKKTNVDSATAPSKKRRTCYECGTPGHLSSA 539
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 86/237 (36%), Gaps = 78/237 (32%)
Query: 440 MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSE-----HLASDCPGTDQGNNLSSNFCL 494
++ +N+ C+ CG+ H +C +D + K E HL+S CP + + C
Sbjct: 386 LKSKNRTCYECGTPGHFSSSCPNKKDSDVRKCYECGTPGHLSSACPNK---KDSEARKCY 442
Query: 495 RCGDSGHDLSSCEGEYHADDL----------------KKIQCYICKSFGHLC--CVN--- 533
CG GH S+C + +D + K+ CY C GHL C N
Sbjct: 443 ECGTPGHLSSACPNKKDSDVISDEKDANANSAIAASKKRRTCYECGIPGHLSSSCPNKKD 502
Query: 534 --------------SSIIGLKQVSCYNCGQSGHLGPECAN-------------------- 559
++ K+ +CY CG GHL C N
Sbjct: 503 SEFISDEKKTNVDSATAPSKKRRTCYECGTPGHLSSACPNKRSDSVPNNREPVDDAKPAT 562
Query: 560 ---SCEALNGKKSNLI-------CYKCGKEGHFARRCGSNFKDRLRISDLLFTAERP 606
S E G +SN CY+CG GH + C + + ++ ++ E+P
Sbjct: 563 TIMSEETKVGDESNSAASKKRRKCYECGISGHLSSACPNK-----KAAEPVYNEEKP 614
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 85/270 (31%), Gaps = 107/270 (39%)
Query: 424 TCSNCGKENHTAATCKMQKQN--KPCFLCGSFKHRWKNCKQGQD-----CFINKGSEHLA 476
TC CG H +++C +K + + C+ CG+ H C +D C+ HL+
Sbjct: 392 TCYECGTPGHFSSSCPNKKDSDVRKCYECGTPGHLSSACPNKKDSEARKCYECGTPGHLS 451
Query: 477 SDCPGTDQGNNLSSN----------------FCLRCGDSGHDLSSC----EGEYHADDLK 516
S CP + +S C CG GH SSC + E+ +D+ K
Sbjct: 452 SACPNKKDSDVISDEKDANANSAIAASKKRRTCYECGIPGHLSSSCPNKKDSEFISDEKK 511
Query: 517 ------------KIQCYICKSFGHL--CCVN----------------------------- 533
+ CY C + GHL C N
Sbjct: 512 TNVDSATAPSKKRRTCYECGTPGHLSSACPNKRSDSVPNNREPVDDAKPATTIMSEETKV 571
Query: 534 ----SSIIGLKQVSCYNCGQSGHLGPECAN------------------------------ 559
+S K+ CY CG SGHL C N
Sbjct: 572 GDESNSAASKKRRKCYECGISGHLSSACPNKKAAEPVYNEEKPDNQSNTVLSVVADEKKA 631
Query: 560 ---SCEALNGKKSNLICYKCGKEGHFARRC 586
+ A KK CY+CG GH + C
Sbjct: 632 NEDTKSAPAKKKKRRTCYECGIAGHLSSEC 661
>gi|213404984|ref|XP_002173264.1| cellular nucleic acid-binding protein [Schizosaccharomyces
japonicus yFS275]
gi|212001311|gb|EEB06971.1| cellular nucleic acid-binding protein [Schizosaccharomyces
japonicus yFS275]
Length = 175
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C NC + H A C ++ K C+ CG+ + HL DCP T
Sbjct: 35 CYNCNQTGHKANECSEPQREKACYNCGT-------------------AGHLVRDCP-TAP 74
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKK----IQCYICKSFGHLCCVNSSIIGLK 540
N ++ C +CG GH +C A + + CY C SFGH G+K
Sbjct: 75 PNPRANAECYKCGRVGHIARACRTSGPAAGGRPGRSNLNCYACGSFGHQ--ARDCTQGVK 132
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY+CG++GH EC S +CYKC + GH A C
Sbjct: 133 ---CYSCGKTGHRSFECEQS-------GGGQLCYKCNQPGHIAVDC 168
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCY 545
+ + C C +GH + C ++ ++ CY C + GHL C + CY
Sbjct: 30 VKGSICYNCNQTGHKANEC-----SEPQREKACYNCGTAGHLVRDCPTAPPNPRANAECY 84
Query: 546 NCGQSGHLGPECANSCEALNGK--KSNLICYKCGKEGHFARRCGSNFK 591
CG+ GH+ C S A G+ +SNL CY CG GH AR C K
Sbjct: 85 KCGRVGHIARACRTSGPAAGGRPGRSNLNCYACGSFGHQARDCTQGVK 132
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 15/98 (15%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQ---------KQNKPCFLCGSFKHRWKNCKQGQDCFI 468
P N+E C CG+ H A C+ + N C+ CGSF H+ ++C QG C+
Sbjct: 77 PRANAE-CYKCGRVGHIARACRTSGPAAGGRPGRSNLNCYACGSFGHQARDCTQGVKCYS 135
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
+ H + +C + G C +C GH C
Sbjct: 136 CGKTGHRSFECEQSGGG-----QLCYKCNQPGHIAVDC 168
>gi|57648428|gb|AAW55909.1| zinc finger protein 8 [Trypanosoma cruzi]
Length = 192
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 70/177 (39%), Gaps = 20/177 (11%)
Query: 421 NSETCSNCGKENHTAATCK--MQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSE 473
N C CGK H + C + +N PCF C HR +C Q C+
Sbjct: 21 NESLCFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRANSCPLAPPEARQPCYRCGEEG 80
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H++ DC T+ S C C +GH C + ++ ++C C GH+ C
Sbjct: 81 HISRDC--TNPRLPRSEQSCFHCHKAGHYARECP-----EVIENLKCNSCGVTGHIARRC 133
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
C+ CG GH+ C N+ +CY CG++GH AR C S
Sbjct: 134 PERIRTARAFYPCFRCGMQGHVARNCPNT----RLPYEEQLCYVCGEKGHLARDCKS 186
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 69/170 (40%), Gaps = 19/170 (11%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-----CFINKGSEHLASD 478
C CG HT+ C CF CG H K+C D CF + + H A+
Sbjct: 2 VCYRCGGVGHTSRDCSRPVNESLCFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRANS 61
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ--CYICKSFGHLCCVNSSI 536
CP + C RCG+ GH C L + + C+ C GH
Sbjct: 62 CPLAPPE---ARQPCYRCGEEGHISRDCTN----PRLPRSEQSCFHCHKAGHY--ARECP 112
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
++ + C +CG +GH+ C E + ++ C++CG +GH AR C
Sbjct: 113 EVIENLKCNSCGVTGHIARRCP---ERIRTARAFYPCFRCGMQGHVARNC 159
>gi|356574489|ref|XP_003555379.1| PREDICTED: uncharacterized protein LOC100783153 [Glycine max]
Length = 1410
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 10/122 (8%)
Query: 447 CFLCGSFKHRWKNCKQGQD------CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSG 500
CF+C + H K C + + C + H A +CP G + +C CG++G
Sbjct: 72 CFICKAMDHIAKLCPEKAEWEKNKICLRCRRRGHRAKNCPEVLDGAK-DAMYCYNCGENG 130
Query: 501 HDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
H L+ C K +C++C GHL C N+ I K C CG HL +C
Sbjct: 131 HSLTQCPHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGGVTHLAKDC 190
Query: 558 AN 559
+
Sbjct: 191 PD 192
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
R K G+ CFI K +H+A CP ++ + CLRC GH +C E
Sbjct: 62 RVPGMKPGESCFICKAMDHIAKLCP--EKAEWEKNKICLRCRRRGHRAKNCP-EVLDGAK 118
Query: 516 KKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI 572
+ CY C GH C G K C+ C Q GHL C + + K
Sbjct: 119 DAMYCYNCGENGHSLTQCPHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGG--C 176
Query: 573 CYKCGKEGHFARRC 586
C CG H A+ C
Sbjct: 177 CKICGGVTHLAKDC 190
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
Query: 425 CSNCGKENHTAATCKMQKQN-----KPCFLCGSFKHRWKNCKQ--------GQDCFINKG 471
C NCG+ H+ C Q CF+C H KNC Q G C I G
Sbjct: 123 CYNCGENGHSLTQCPHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGG 182
Query: 472 SEHLASDCPGTDQGNNLSSN 491
HLA DCP + ++++N
Sbjct: 183 VTHLAKDCPDKGKSGSVAAN 202
>gi|448081812|ref|XP_004194980.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
gi|359376402|emb|CCE86984.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
Length = 179
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 73/179 (40%), Gaps = 30/179 (16%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-----CFINKGSEHLASD 478
TC CG+ H A C Q+Q + C+ C H +C Q + C+ HL D
Sbjct: 8 TCYKCGEVGHLADNC--QQQQRLCYNCREPGHESNDCPQPKQASQKQCYSCGDLGHLQGD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGH---DLSSCEGEYHADD--------LKKIQCYICKSFG 527
CP QG+ C CG GH +S G+ A K CY C
Sbjct: 66 CPTQSQGSK-----CYNCGQFGHISKQCTSASGQAAAAPKKANGARFSKAATCYKCGGPN 120
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H GL V CY CG++GH+ EC A +G CY+CG+ GH ++ C
Sbjct: 121 HF--ARDCQAGL--VKCYACGKTGHISKECP---AAASGDSLAKACYQCGQVGHISKEC 172
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 59/148 (39%), Gaps = 21/148 (14%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLA 476
P + + C +CG H C Q Q C+ CG F H K C + A
Sbjct: 45 PKQASQKQCYSCGDLGHLQGDCPTQSQGSKCYNCGQFGHISKQCTS---------ASGQA 95
Query: 477 SDCPGTDQGNNLS-SNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCV 532
+ P G S + C +CG H C+ ++CY C GH+ C
Sbjct: 96 AAAPKKANGARFSKAATCYKCGGPNHFARDCQAGL-------VKCYACGKTGHISKECPA 148
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANS 560
+S L + +CY CGQ GH+ EC N+
Sbjct: 149 AASGDSLAK-ACYQCGQVGHISKECENA 175
>gi|342887520|gb|EGU87002.1| hypothetical protein FOXB_02396 [Fusarium oxysporum Fo5176]
Length = 457
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 66/168 (39%), Gaps = 39/168 (23%)
Query: 425 CSNCGKENHTAATCKMQKQNKP------CFLCGSFKHRWKNCKQGQDCFINKGSEHLASD 478
C NC + H + C +K + CF CG+ HR ++C +
Sbjct: 253 CLNCKELGHISKFCTQEKTERSDAVKISCFNCGADGHRVRDCPE---------------- 296
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
P D+ N C CG SGH + CE + ++C C GH G
Sbjct: 297 -PRVDK------NACKNCGKSGHRAADCE---EPPNPANVECRKCNEMGHF--AKDCPQG 344
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+C NCGQ GH+ +C + S + C C K+GHF+R C
Sbjct: 345 GGSRACRNCGQEGHISKDCDQPRDM-----STVTCRNCEKQGHFSREC 387
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 424 TCSNCGKENHTAATCK--MQKQNKPCFLCGSFKHRWKNCKQGQDCFI--NKGSE-HLASD 478
C NCGK H AA C+ N C C H K+C QG N G E H++ D
Sbjct: 303 ACKNCGKSGHRAADCEEPPNPANVECRKCNEMGHFAKDCPQGGGSRACRNCGQEGHISKD 362
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
C DQ ++S+ C C GH C D K+QC C+ +GH
Sbjct: 363 C---DQPRDMSTVTCRNCEKQGHFSRECP---EPKDWSKVQCSNCQEYGH 406
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 54/140 (38%), Gaps = 14/140 (10%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-PCFLCGSFKHRWKNCKQGQD-----CFINKGSEHLAS 477
+C NCG + H C + +K C CG HR +C++ + C H A
Sbjct: 280 SCFNCGADGHRVRDCPEPRVDKNACKNCGKSGHRAADCEEPPNPANVECRKCNEMGHFAK 339
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DCP QG S C CG GH C+ D+ + C C+ GH
Sbjct: 340 DCP---QGG--GSRACRNCGQEGHISKDCD---QPRDMSTVTCRNCEKQGHFSRECPEPK 391
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V C NC + GH C
Sbjct: 392 DWSKVQCSNCQEYGHTKVRC 411
>gi|343960683|dbj|BAK61931.1| cellular nucleic acid-binding protein [Pan troglodytes]
Length = 170
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCK-QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C QG C+ H+A DC + C CG GH
Sbjct: 47 CYRCGESGHLAKDCDLQGDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 104 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS------- 144
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K S + C +CG+ GH AR C
Sbjct: 145 -KTSEVNCSRCGESGHLAREC 164
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 25/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG SGH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L+ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQGDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 104
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 491 NFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQS 550
+ C RCG+SGH C DL+ CY C GH+ ++ CYNCG+
Sbjct: 45 DICYRCGESGHLAKDC-------DLQGDACYNCGRGGHIAKDCKEPKREREQCCYNCGKP 97
Query: 551 GHLGPEC-------ANSCEALNGKKSNLI---CYKCGKEGHFARRC 586
GHL +C SC + + CY+CG+ GH A C
Sbjct: 98 GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINC 143
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C NCGK H A C + K C+ CG F H K+C + + C+ + H+A +C T
Sbjct: 89 QCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKT 146
Query: 483 DQGNNLSSNFCLRCGDSGH 501
+ N C RCG+SGH
Sbjct: 147 SEVN------CSRCGESGH 159
>gi|303322458|ref|XP_003071222.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240110921|gb|EER29077.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 195
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 32/169 (18%)
Query: 438 CKMQKQNKPCFLCGSFKHRWKNCKQ--------GQDCFINKGSEHLASDCPGTDQGNNLS 489
C + K C+ CG H ++C Q GQ+C+ H++ +CP +
Sbjct: 37 CNEPAKEKSCYRCGLTGHISRDCPQAGESGGARGQECYKCGQVGHISRECPQGGESGEAR 96
Query: 490 SNFCLRCGDSGHDLSSCEGEYHADDL------------KKIQCYICKSFGHLCCVNSSII 537
C +CG GH +C G+Y + + + CY C +GH
Sbjct: 97 GQECYKCGQVGHISRNC-GQYSGYNGGGYNAGSYRYGNRPLTCYSCGGYGHR--ARDCTQ 153
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G K CYNCG++GH+ +C K +CYKC + GH C
Sbjct: 154 GQK---CYNCGETGHVSRDCTTE------GKGERVCYKCKQPGHVQAAC 193
>gi|10185395|emb|CAC08539.1| CCHC zinc finger protein [Trypanosoma brucei]
Length = 140
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 60/167 (35%), Gaps = 39/167 (23%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
N+ TC NCG H + C + N G+ C+ +H++ DCP
Sbjct: 9 NARTCYNCGHAGHMSRECPNARSGG-------------NMGGGRSCYNCGQPDHISRDCP 55
Query: 481 GTDQGNNLSSN-FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
G N+ C CG GH C ++ +
Sbjct: 56 NARTGGNMGGGRSCYNCGRPGHISRDCPNARSGGNMGGGR-------------------- 95
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CY+C Q GH+ EC N+ L+ C+ CG+ GH +R C
Sbjct: 96 ---ACYHCQQEGHIARECPNA--PLDAAAGGRACFNCGQPGHLSRAC 137
>gi|326919350|ref|XP_003205944.1| PREDICTED: cellular nucleic acid-binding protein-like [Meleagris
gallopavo]
Length = 134
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CG GH C+ HAD K +CY C FGH+ +V CY CG++GH
Sbjct: 55 CYNCGKPGHLARDCD---HAD---KQKCYSCGEFGHI------QKDCTKVKCYRCGETGH 102
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ C+ K S + CY+CGK GH AR C
Sbjct: 103 VAISCS--------KTSEVNCYRCGKSGHLAREC 128
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
Query: 386 AKDKVEDARKENEAKYNVVL---RMLL------RKPRYF--DPPGWNSETCSNCGKENHT 434
A DK++D+R N + R L R +Y+ +P + C NCGK H
Sbjct: 5 ATDKIQDSRFSGSFTINFNVTKKRSGLQGVSQQRGGKYYCKEPKREREQCCYNCGKPGHL 64
Query: 435 AATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCL 494
A C + K C+ CG F H K+C + + C+ + H+A C T + N C
Sbjct: 65 ARDCDHADKQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHVAISCSKTSEVN------CY 116
Query: 495 RCGDSGHDLSSC 506
RCG SGH C
Sbjct: 117 RCGKSGHLAREC 128
>gi|148666814|gb|EDK99230.1| cellular nucleic acid binding protein, isoform CRA_c [Mus musculus]
Length = 149
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 23/131 (17%)
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
R C++ C+ H+A DC + C CG GH C+ HAD+
Sbjct: 36 RIVICRRMVTCYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARDCD---HADEQ 89
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
K CY C FGH+ +V CY CG++GH+ C+ K S + CY+
Sbjct: 90 K---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS--------KTSEVNCYR 132
Query: 576 CGKEGHFARRC 586
CG+ GH AR C
Sbjct: 133 CGESGHLAREC 143
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 57/135 (42%), Gaps = 37/135 (27%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSE-HLASDCPGT 482
TC NCG+ H A CK K+ + + C N G HLA DC
Sbjct: 45 TCYNCGRGGHIAKDCKEPKRER------------------EQCCYNCGKPGHLARDCDHA 86
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
D+ C CG+ GH D K++CY C GH+ +N S +V
Sbjct: 87 DEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCS--KTSEV 128
Query: 543 SCYNCGQSGHLGPEC 557
+CY CG+SGHL EC
Sbjct: 129 NCYRCGESGHLAREC 143
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 61 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 118
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE 509
A +C T + N C RCG+SGH C E
Sbjct: 119 AINCSKTSEVN------CYRCGESGHLARECTIE 146
>gi|299752369|ref|XP_001830882.2| hypothetical protein CC1G_02333 [Coprinopsis cinerea okayama7#130]
gi|298409801|gb|EAU90946.2| hypothetical protein CC1G_02333 [Coprinopsis cinerea okayama7#130]
Length = 929
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 482 TDQGNN-LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
T GN+ S + C +C GH ++C K+ +SFG NS+ G
Sbjct: 824 TSMGNSGTSKDVCFKCNQPGHWSNACPNPDGGSLNKRP-----RSFGS-ATANST--GSS 875
Query: 541 QVSCYNCGQSGHLGPECANSCEALN--GKKSNLICYKCGKEGHFA 583
+ C+ C + GHL P C NS ++ + G KSN C+KC K+GHFA
Sbjct: 876 SLVCFKCKEPGHLAPSCPNSGQSYSQGGSKSNAECFKCNKKGHFA 920
>gi|407920706|gb|EKG13888.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 347
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 52/126 (41%), Gaps = 11/126 (8%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ G H+ +CP +G C CG GH S C CY C
Sbjct: 111 CYNCGGHGHIKVNCPEAPRGGGGQE--CYGCGQVGHRKSECP----NGGGGGRACYNCGQ 164
Query: 526 FGH--LCCVNSSI---IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
+GH C N S G CYNCG+ GHL EC N G + +C+KC K G
Sbjct: 165 YGHRKADCPNPSQGDNSGGGGRPCYNCGEIGHLKSECTNPINPATGGGDDRLCFKCHKVG 224
Query: 581 HFARRC 586
H AR C
Sbjct: 225 HMARDC 230
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 68/178 (38%), Gaps = 32/178 (17%)
Query: 424 TCSNCGKENHTAATCKMQKQ---NKPCFLCGSFKHRWKNCKQ----GQDCFINKGSEHLA 476
+C NCG H C + + C+ CG HR C G+ C+ H
Sbjct: 110 SCYNCGGHGHIKVNCPEAPRGGGGQECYGCGQVGHRKSECPNGGGGGRACYNCGQYGHRK 169
Query: 477 SDCPGTDQGNNLSSNF--CLRCGDSGHDLSSCEGEYH-----ADDLKKIQCYICKSFGHL 529
+DCP QG+N C CG+ GH S C + DD C+ C GH+
Sbjct: 170 ADCPNPSQGDNSGGGGRPCYNCGEIGHLKSECTNPINPATGGGDDR---LCFKCHKVGHM 226
Query: 530 CCVNSSIIGLKQVS-CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ + C NC Q GH EC L S + C C ++GH +RC
Sbjct: 227 ---------ARDCNFCPNCEQEGHGFFEC-----HLKKDYSKITCTVCKEKGHTKKRC 270
>gi|294463728|gb|ADE77389.1| unknown [Picea sitchensis]
Length = 301
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 447 CFLCGSFKHRWKNCK------QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSG 500
CF+CG+ H K C + + C + + H C Q N + +C CG++G
Sbjct: 75 CFICGARDHIAKGCPSKDRWDREKICLLCRERGHTMKHCYNNQQ--NHETKYCYNCGETG 132
Query: 501 HDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
H LS C +C++CK GHL C N+ I K SC CG HL +C
Sbjct: 133 HRLSECPEPIQNGGTAFAECFLCKERGHLSKNCPTNTHGIYPKGGSCKICGGLTHLAKDC 192
Query: 558 A 558
Sbjct: 193 P 193
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 18/175 (10%)
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
R K G+ CFI +H+A CP D+ + CL C + GH + C +
Sbjct: 65 RVPGSKPGEGCFICGARDHIAKGCPSKDRWDR--EKICLLCRERGHTMKHCYNNQQNHET 122
Query: 516 KKIQCYICKSFGHLCCVNSSII---GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI 572
K CY C GH I G C+ C + GHL C + + K +
Sbjct: 123 K--YCYNCGETGHRLSECPEPIQNGGTAFAECFLCKERGHLSKNCPTNTHGIYPKGGS-- 178
Query: 573 CYKCGKEGHFARRC---------GSNFKDRLRISDLLFTAERPPTRARHFVGSNG 618
C CG H A+ C + +L+IS TA +P + + V +G
Sbjct: 179 CKICGGLTHLAKDCPEKNTEKLASGRGQTKLQISREPATAAKPGEQGKRIVFPSG 233
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 32/75 (42%), Gaps = 15/75 (20%)
Query: 421 NSET--CSNCGKENHTAATCKMQKQN-----KPCFLCGSFKHRWKNC--------KQGQD 465
N ET C NCG+ H + C QN CFLC H KNC +G
Sbjct: 119 NHETKYCYNCGETGHRLSECPEPIQNGGTAFAECFLCKERGHLSKNCPTNTHGIYPKGGS 178
Query: 466 CFINKGSEHLASDCP 480
C I G HLA DCP
Sbjct: 179 CKICGGLTHLAKDCP 193
>gi|331231943|ref|XP_003328634.1| hypothetical protein PGTG_10593 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307624|gb|EFP84215.1| hypothetical protein PGTG_10593 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 153
Score = 58.2 bits (139), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH--LCCVNSSIIGLKQVS 543
+ LS+ C +CG GH C E CY CK GH C N G+
Sbjct: 2 SGLSNRACFKCGALGHLAEQCPAESRL-------CYNCKQSGHESASCPNPRTGGVDGRQ 54
Query: 544 CYNCGQSGHLGPECANSCEALN-----GKKSNLICYKCGKEGHFARRC 586
C+ CG GHL +C ++ N G CY CG+ GH +R C
Sbjct: 55 CFTCGGFGHLAADCPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSC 102
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 60/166 (36%), Gaps = 52/166 (31%)
Query: 444 NKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
N+ CF CG+ H LA CP S C C SGH+
Sbjct: 6 NRACFKCGALGH-------------------LAEQCPA-------ESRLCYNCKQSGHES 39
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIG--------LKQVSCYNCGQSGHL 553
+SC + QC+ C FGHL C +++ +G CY CGQ GH+
Sbjct: 40 ASCPNP-RTGGVDGRQCFTCGGFGHLAADCPSATTLGNRIAGVGSFGGTKCYTCGQFGHV 98
Query: 554 GPECANSCEA---------LNGKKSN------LICYKCGKEGHFAR 584
C +S + G K + CYKC H+AR
Sbjct: 99 SRSCNHSGNGVGQGAFQSRIGGYKPRPAPSQPVQCYKCQGMNHYAR 144
Score = 48.1 bits (113), Expect = 0.016, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 54/141 (38%), Gaps = 33/141 (23%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ-------GQDCFINKG 471
G ++ C CG H A C +++ C+ C H +C G+ CF G
Sbjct: 3 GLSNRACFKCGALGHLAEQCP--AESRLCYNCKQSGHESASCPNPRTGGVDGRQCFTCGG 60
Query: 472 SEHLASDCP-GTDQGNNLS------SNFCLRCGDSGHDLSSC--------EGEYHAD--- 513
HLA+DCP T GN ++ C CG GH SC +G + +
Sbjct: 61 FGHLAADCPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSCNHSGNGVGQGAFQSRIGG 120
Query: 514 ------DLKKIQCYICKSFGH 528
+ +QCY C+ H
Sbjct: 121 YKPRPAPSQPVQCYKCQGMNH 141
Score = 43.1 bits (100), Expect = 0.50, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 15/73 (20%)
Query: 520 CYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECAN-SCEALNGKKSNLICYK 575
C+ C + GHL C S + CYNC QSGH C N ++G++ C+
Sbjct: 9 CFKCGALGHLAEQCPAESRL-------CYNCKQSGHESASCPNPRTGGVDGRQ----CFT 57
Query: 576 CGKEGHFARRCGS 588
CG GH A C S
Sbjct: 58 CGGFGHLAADCPS 70
>gi|195638752|gb|ACG38844.1| actin depolymerizing factor [Zea mays]
Length = 276
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 447 CFLCGSFKHRWKNCKQG------QDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSG 500
CF+C S H K C + + C + + H +CP GN + FC CG+SG
Sbjct: 71 CFICKSTDHVAKACPEKALWDKKKICLLCRERGHSLKNCPDKXXGNLMK--FCYNCGESG 128
Query: 501 HDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
H LS C C+IC GHL C N I K C CG+ HL C
Sbjct: 129 HSLSKCPKPIENGGTNFASCFICNQQGHLSKNCPENKHGIYPKGGCCKVCGEVTHLARHC 188
Query: 558 AN 559
N
Sbjct: 189 PN 190
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 451 GSFKH--RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG 508
G FKH R + G+ CFI K ++H+A CP ++ CL C + GH L +C
Sbjct: 54 GRFKHPLRVPGMRPGERCFICKSTDHVAKACP--EKALWDKKKICLLCRERGHSLKNCPD 111
Query: 509 EYHADDLKKIQCYICKSFGHLCCVNSSII---GLKQVSCYNCGQSGHLGPECANSCEALN 565
+ + +K CY C GH I G SC+ C Q GHL C + +
Sbjct: 112 KXXGNLMK--FCYNCGESGHSLSKCPKPIENGGTNFASCFICNQQGHLSKNCPENKHGIY 169
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K C CG+ H AR C
Sbjct: 170 PKGG--CCKVCGEVTHLARHC 188
>gi|221222052|gb|ACM09687.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 140
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 70/164 (42%), Gaps = 47/164 (28%)
Query: 440 MQKQNKPCFLCGSFKHRWKNCKQG------------QDCFINKGSE--HLASDCPGTDQG 485
M+ + CF CG H KNC + +D F + E H+A DC T+
Sbjct: 1 MEMSSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDA 60
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQV 542
C C SGH C+ HA++ K CY C FGH LC +V
Sbjct: 61 -------CYNCHRSGHISRDCD---HANEQK---CYSCGGFGHIQKLC---------DKV 98
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG+ GH+ +C+ K S + CYKCG GH A+ C
Sbjct: 99 KCYRCGEIGHVAVQCS--------KASEVNCYKCGNTGHLAKEC 134
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 41/134 (30%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTD 483
C CG++ H A ++C+Q +D C+ S H++ DC D
Sbjct: 41 CYRCGEQGHIA----------------------RDCEQTEDACYNCHRSGHISRDC---D 75
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS 543
N C CG GH C+ K++CY C GH V +V+
Sbjct: 76 HANEQK---CYSCGGFGHIQKLCD---------KVKCYRCGEIGH---VAVQCSKASEVN 120
Query: 544 CYNCGQSGHLGPEC 557
CY CG +GHL EC
Sbjct: 121 CYKCGNTGHLAKEC 134
>gi|71756201|ref|XP_829015.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834401|gb|EAN79903.1| nucleic acid binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261334955|emb|CBH17949.1| nucleic acid binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 516
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 41/166 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFL------------------CGSFKHRWKNCKQGQD 465
C +CG H A+C ++ ++ CF CG++ H + C
Sbjct: 63 VCRSCGSSRHAEASCPLRMKSMECFQCHQKGHLLPMCPQTRCYNCGNYGHSSQRCLSRPL 122
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H ++DCP ++G C RC GHD++ C L + C+ C
Sbjct: 123 CYHCSSTGHRSTDCPLREKG-----RVCYRCKKPGHDMAGCS-------LSAL-CFTCNG 169
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL 571
GH+ Q+SC C GH+ +C + +G +SN+
Sbjct: 170 EGHM------SAQCPQISCNRCNAKGHVAAQCPQA----SGNRSNV 205
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 45/115 (39%), Gaps = 21/115 (18%)
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
P T++ + C CG S H +SC +K ++C+ C GHL +
Sbjct: 51 PRTEEEEEALPSVCRSCGSSRHAEASCPLR-----MKSMECFQCHQKGHL------LPMC 99
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRL 594
Q CYNCG GH C S +CY C GH + C K R+
Sbjct: 100 PQTRCYNCGNYGHSSQRCL----------SRPLCYHCSSTGHRSTDCPLREKGRV 144
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 23/112 (20%)
Query: 484 QGNNLSSNFCLRCGDSGHDLSSC-------EGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
Q N+L C CG+ GHD +C E + L + C C S H S
Sbjct: 24 QANSLVR--CSICGNVGHDKVACLSARKRPRTEEEEEALPSV-CRSCGSSRHA--EASCP 78
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+ +K + C+ C Q GHL P C + CY CG GH ++RC S
Sbjct: 79 LRMKSMECFQCHQKGHLLPMCPQT-----------RCYNCGNYGHSSQRCLS 119
>gi|338729303|ref|XP_001505024.3| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
Length = 170
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H ++C ++ N G S H+A DC + C CG GH
Sbjct: 47 CYRCGESGHHARDCHLLENICYNCGRSGHIAKDC---TEPKREREQCCYTCGRRGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C D ++ +CY C GH QV CY CG++GH+ C+
Sbjct: 104 C------DRQEQQKCYSCGELGHF------QKDCTQVKCYRCGETGHVAINCS------- 144
Query: 566 GKKSNLICYKCGKEGHFARRC 586
KK+ + CY+CGK GH AR C
Sbjct: 145 -KKNKVNCYRCGKPGHLAREC 164
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 25/140 (17%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHLAS 477
+ C CG+ H A C + + C+ CG H K+C + Q C+ HLA
Sbjct: 45 DICYRCGESGHHARDCHLLEN--ICYNCGRSGHIAKDCTEPKREREQCCYTCGRRGHLAR 102
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC +Q C CG+ GH D +++CY C GH+ +N S
Sbjct: 103 DCDRQEQ------QKCYSCGELGH---------FQKDCTQVKCYRCGETGHVA-INCSK- 145
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+ GHL EC
Sbjct: 146 -KNKVNCYRCGKPGHLAREC 164
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 35/149 (23%)
Query: 464 QDCFINKGSEHLASDCPGT-------------DQGNNLS-SNFCLRCGDSGHDLSSCEGE 509
+DCF S H A CP QG + + + C RCG+SGH
Sbjct: 4 KDCFRGGRSGHWARGCPRGGARGRGARGRGRGSQGTSTTLPDICYRCGESGH-------- 55
Query: 510 YHADDLKKIQ--CYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC-------ANS 560
HA D ++ CY C GH+ + ++ CY CG+ GHL +C S
Sbjct: 56 -HARDCHLLENICYNCGRSGHIAKDCTEPKREREQCCYTCGRRGHLARDCDRQEQQKCYS 114
Query: 561 CEALNGKKSNLI---CYKCGKEGHFARRC 586
C L + + CY+CG+ GH A C
Sbjct: 115 CGELGHFQKDCTQVKCYRCGETGHVAINC 143
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C Q+Q K C+ CG H K+C Q + C+ + H+A +C
Sbjct: 89 QCCYTCGRRGHLARDCDRQEQQK-CYSCGELGHFQKDCTQVK-CYRCGETGHVAINCSKK 146
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGE 509
++ N C RCG GH C E
Sbjct: 147 NKVN------CYRCGKPGHLARECPTE 167
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSC---------------EGEYHADDLKKIQCYICKSFGHLCCV 532
+SS C R G SGH C + + L I CY C GH
Sbjct: 1 MSSKDCFRGGRSGHWARGCPRGGARGRGARGRGRGSQGTSTTLPDI-CYRCGESGH---- 55
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
++ L + CYNCG+SGH+ +C ++ CY CG+ GH AR C
Sbjct: 56 HARDCHLLENICYNCGRSGHIAKDCTEP-----KREREQCCYTCGRRGHLARDC 104
>gi|302143876|emb|CBI22737.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 63/154 (40%), Gaps = 15/154 (9%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC--EGEYHADDLKKI 518
K G+ CFI K +H+A CP Q CL C GH L +C +GE + L K
Sbjct: 74 KPGESCFICKAKDHIAKHCPEKAQWER--HKICLLCRQRGHSLKNCPDKGE---EKLDKK 128
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
CY C GH C G K SC+ C + GHL C + + K C
Sbjct: 129 LCYNCGETGHSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHGIYPKGG--CCKI 186
Query: 576 CGKEGHFARRC---GSNFKDRLRISDLLFTAERP 606
CG H A+ C G N I+ + ERP
Sbjct: 187 CGGVTHLAKDCPNKGCNNSPVAAIAGGIKHEERP 220
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 57/143 (39%), Gaps = 26/143 (18%)
Query: 423 ETCSNCGKENHTAATCKMQKQ---NKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
E+C C ++H A C + Q +K C LC H KNC +KG E
Sbjct: 77 ESCFICKAKDHIAKHCPEKAQWERHKICLLCRQRGHSLKNCP-------DKGEE------ 123
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSI 536
L C CG++GH L++C K C+IC GHL C NS
Sbjct: 124 -------KLDKKLCYNCGETGHSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHG 176
Query: 537 IGLKQVSCYNCGQSGHLGPECAN 559
I K C CG HL +C N
Sbjct: 177 IYPKGGCCKICGGVTHLAKDCPN 199
>gi|71747588|ref|XP_822849.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|70832517|gb|EAN78021.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|261332660|emb|CBH15655.1| predicted zinc finger protein [Trypanosoma brucei gambiense DAL972]
Length = 140
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 64/168 (38%), Gaps = 41/168 (24%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
N+ TC NCG+ H + C + N G+ C+ +H++ DCP
Sbjct: 9 NARTCYNCGQPGHMSRECPNARSGG-------------NMGGGRSCYNCGQPDHISRDCP 55
Query: 481 GTDQGNNLSSN-FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
G N+ C CG GH C ++ +
Sbjct: 56 NARTGGNMGGGRSCYNCGRPGHISRDCPNARSGGNMGGGR-------------------- 95
Query: 540 KQVSCYNCGQSGHLGPECANS-CEALNGKKSNLICYKCGKEGHFARRC 586
+CY+C Q GH+ EC N+ +A G ++ C+ CG+ GH +R C
Sbjct: 96 ---ACYHCQQEGHIARECPNAPADAAAGGRA---CFNCGQPGHLSRAC 137
>gi|254569552|ref|XP_002491886.1| Protein with seven cysteine-rich CCHC zinc-finger motifs, similar
to human CNBP [Komagataella pastoris GS115]
gi|238031683|emb|CAY69606.1| Protein with seven cysteine-rich CCHC zinc-finger motifs, similar
to human CNBP [Komagataella pastoris GS115]
gi|328351614|emb|CCA38013.1| Zinc finger protein GIS2 [Komagataella pastoris CBS 7435]
Length = 171
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
CF CG H +NC+Q Q C+ + H ++DCP Q SS C C ++GH S
Sbjct: 10 CFKCGEVGHLAENCQQEQKLCYNCRAPGHESNDCPEPKQ---TSSKQCYNCNETGHVQSE 66
Query: 506 CEGEYHADDLKKIQCYICKSFGHLC--CVNSS------IIGLKQVSCYNCGQSGHLGPEC 557
CE K +CY C GH C NSS + CY C H
Sbjct: 67 CE-----QPKKAAKCYSCGKLGHFSRHCPNSSSASSAGPVASSSTICYKCSGPNHF---- 117
Query: 558 ANSCEALNGKKSNLICYKCGKEGHFARRC 586
A C+A + K CY CGK GH ++ C
Sbjct: 118 ARDCQAGSPK-----CYACGKLGHISKDC 141
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 75/191 (39%), Gaps = 33/191 (17%)
Query: 378 RKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRY-----FDPPGWNSETCSNCGKEN 432
R + E E+ ++E + YN R P + +P +S+ C NC +
Sbjct: 8 RTCFKCGEVGHLAENCQQEQKLCYNC------RAPGHESNDCPEPKQTSSKQCYNCNETG 61
Query: 433 HTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNF 492
H + C+ K+ C+ CG H ++C + +AS SS
Sbjct: 62 HVQSECEQPKKAAKCYSCGKLGHFSRHCPNSSS---ASSAGPVAS-----------SSTI 107
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +C H C+ +CY C GH+ + ++ G +CYNCG+ GH
Sbjct: 108 CYKCSGPNHFARDCQA-------GSPKCYACGKLGHIS-KDCTVSGGSTKACYNCGEQGH 159
Query: 553 LGPECANSCEA 563
+ +C + EA
Sbjct: 160 ISRDCPPTAEA 170
>gi|426249733|ref|XP_004018604.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Ovis
aries]
Length = 176
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C+ CG K+ +G C+ H+A DC + C CG GH C
Sbjct: 54 CYRCGESGPPAKDWIRGGPCYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARDC 110
Query: 507 EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNG 566
+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 111 D---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS-------- 150
Query: 567 KKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 151 KTSEVNCYRCGESGHLAREC 170
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 63/140 (45%), Gaps = 26/140 (18%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ A K + PC+ CG H K+CK+ + C N G HLA
Sbjct: 52 DICYRCGESGPPA---KDWIRGGPCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 108
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 109 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 152
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 153 --SEVNCYRCGESGHLAREC 170
>gi|388501938|gb|AFK39035.1| unknown [Medicago truncatula]
Length = 220
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 447 CFLCGSFKHRWKNCKQGQD------CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSG 500
CF+C H K C Q + C + H A +CP D G+ +C CGD+G
Sbjct: 69 CFICKGLDHIAKFCTQKAEWEKNKICLRCRRRGHRAQNCP--DGGSKEDFKYCYNCGDNG 126
Query: 501 HDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
H L++C QC++CK GHL C N+ I K C CG HL +C
Sbjct: 127 HSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGGVTHLARDC 186
Query: 558 AN 559
+
Sbjct: 187 PD 188
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 63/154 (40%), Gaps = 16/154 (10%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
G CFI KG +H+A C T + + CLRC GH +C +D K CY
Sbjct: 66 GDSCFICKGLDHIAKFC--TQKAEWEKNKICLRCRRRGHRAQNCPDGGSKEDFK--YCYN 121
Query: 523 CKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
C GH C G C+ C + GHL C + + K C CG
Sbjct: 122 CGDNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGG--CCKICGGV 179
Query: 580 GHFARRC---GSN-FKD---RLRISDLLFTAERP 606
H AR C G N F D + + +LL T ERP
Sbjct: 180 THLARDCPDKGQNGFGDGRPKGPVHNLLRTDERP 213
>gi|258676573|gb|ACV87294.1| VASA DEAD-box protein [Phallusia mammillata]
Length = 851
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 72/201 (35%), Gaps = 40/201 (19%)
Query: 425 CSNCGKENHTAATCKMQKQN----------KPCFLCGSFKHRWKNCKQG----------- 463
C CG+E H + C Q K CF CG H + C
Sbjct: 132 CFKCGEEGHKSRECPKGGQQGFGASGGGRPKTCFKCGEEGHMSRECPSADSSSGGFGGSG 191
Query: 464 ----QDCFINKGSEHLASDCPGTDQGNNLSSNF----CLRCGDSGHDLSSCEGEYHADDL 515
+ CF H++ +CP D + C +CG+ GH C
Sbjct: 192 GGRPKTCFKCGEEGHMSRECPSADSSSGGFGGGKSRGCFKCGEEGHMSRDCPSGGSTGFG 251
Query: 516 KKI--QCYICKSFGHLC------CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGK 567
C+ C GH+ G + C+ CG+ GH+ EC + ++ N
Sbjct: 252 GGKSKSCFKCGEEGHMSRDCPSGGSQGGFGGGRPKGCFKCGEEGHMSRECPSGGDSSNRG 311
Query: 568 KSNLICYKCGKEGHFARRCGS 588
K C+KCG+EGH AR C S
Sbjct: 312 KG---CFKCGEEGHMARDCPS 329
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 74/200 (37%), Gaps = 30/200 (15%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-------------QD 465
G+NS + + + + + K CF CG H+ + C +G +
Sbjct: 104 GFNSGSFGDKPDRSFASGESSSNNKGKGCFKCGEEGHKSRECPKGGQQGFGASGGGRPKT 163
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNF-------CLRCGDSGHDLSSCE----GEYHADD 514
CF H++ +CP D + C +CG+ GH C
Sbjct: 164 CFKCGEEGHMSRECPSADSSSGGFGGSGGGRPKTCFKCGEEGHMSRECPSADSSSGGFGG 223
Query: 515 LKKIQCYICKSFGHLC--CVNSSIIGLKQV---SCYNCGQSGHLGPECANSCEALNGKKS 569
K C+ C GH+ C + G SC+ CG+ GH+ +C +
Sbjct: 224 GKSRGCFKCGEEGHMSRDCPSGGSTGFGGGKSKSCFKCGEEGHMSRDCPSGGSQGGFGGG 283
Query: 570 NLI-CYKCGKEGHFARRCGS 588
C+KCG+EGH +R C S
Sbjct: 284 RPKGCFKCGEEGHMSRECPS 303
>gi|357168159|ref|XP_003581512.1| PREDICTED: uncharacterized protein LOC100826202 [Brachypodium
distachyon]
Length = 422
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 58/149 (38%), Gaps = 26/149 (17%)
Query: 423 ETCSNCGKENHTAATCK---MQKQNKPCFLCGSFKHRWKNCKQGQD------CFINKGSE 473
E C C +H A TC + +NK C LC H KNC + D C+ GS
Sbjct: 71 ERCFICKSTDHVAKTCPEKSLWDKNKICLLCRERGHSLKNCPEKSDGDLKKFCYNCGGSG 130
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---C 530
H S CP + L +F L G + +S C++CK GHL C
Sbjct: 131 HSLSKCPKPIENGTLHPHFLLIDFAGGTNFAS--------------CFVCKQQGHLSKDC 176
Query: 531 CVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
N I K C CG+ HL C N
Sbjct: 177 PENKHGIYPKGGCCKVCGEVTHLARHCPN 205
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 58/142 (40%), Gaps = 22/142 (15%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
+ G+ CFI K ++H+A CP + + CL C + GH L +C E DLKK C
Sbjct: 68 RPGERCFICKSTDHVAKTCPEKSLWDK--NKICLLCRERGHSLKNCP-EKSDGDLKKF-C 123
Query: 521 YICKSFGHLCCVNSSII----------------GLKQVSCYNCGQSGHLGPECANSCEAL 564
Y C GH I G SC+ C Q GHL +C + +
Sbjct: 124 YNCGGSGHSLSKCPKPIENGTLHPHFLLIDFAGGTNFASCFVCKQQGHLSKDCPENKHGI 183
Query: 565 NGKKSNLICYKCGKEGHFARRC 586
K C CG+ H AR C
Sbjct: 184 YPKGG--CCKVCGEVTHLARHC 203
>gi|320168085|gb|EFW44984.1| hypothetical protein CAOG_02990 [Capsaspora owczarzaki ATCC 30864]
Length = 510
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 58/158 (36%), Gaps = 36/158 (22%)
Query: 447 CFLCGSFKHRWKNCKQGQ---------DCFINKGSEHLASDCPGTDQGNNLSSNFCLRCG 497
C+ CG F H C +C + KG H+ CP N++ SN C C
Sbjct: 154 CYKCGGFGHIQDFCPSPSGSIDMEGAVECHLCKGKGHVKMRCP-----NSVPSNVCYLCQ 208
Query: 498 DSGHDLSSCEGEYHADDLKKIQ-------CYICKSFGHLCCVNSSIIGLKQV--SCYNCG 548
GH C L + CY C+ GHL + +Q SCY CG
Sbjct: 209 MPGHFARECPRGRDPYGLNRAPFGGDSRLCYRCQQPGHLSANCPRVARGEQSLSSCYKCG 268
Query: 549 QSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
Q GH+ +C +CY C K GH A C
Sbjct: 269 QEGHIAKDCN-------------VCYHCKKTGHVAASC 293
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 512 ADD--LKKIQCYICKSFGHL---CCVNSSIIGLK-QVSCYNCGQSGHLGPECANSCEALN 565
ADD KK CY C FGH+ C S I ++ V C+ C GH+ C NS
Sbjct: 144 ADDGPRKKENCYKCGGFGHIQDFCPSPSGSIDMEGAVECHLCKGKGHVKMRCPNS----- 198
Query: 566 GKKSNLICYKCGKEGHFARRC 586
SN +CY C GHFAR C
Sbjct: 199 -VPSN-VCYLCQMPGHFAREC 217
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 29/121 (23%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD---------------CFIN 469
C C + H C + C+LC H + C +G+D C+
Sbjct: 182 CHLCKGKGHVKMRCPNSVPSNVCYLCQMPGHFARECPRGRDPYGLNRAPFGGDSRLCYRC 241
Query: 470 KGSEHLASDCPGTDQG-NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
+ HL+++CP +G +LSS C +CG GH C CY CK GH
Sbjct: 242 QQPGHLSANCPRVARGEQSLSS--CYKCGQEGHIAKDCN-----------VCYHCKKTGH 288
Query: 529 L 529
+
Sbjct: 289 V 289
>gi|242791199|ref|XP_002481710.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
stipitatus ATCC 10500]
gi|218718298|gb|EED17718.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
stipitatus ATCC 10500]
Length = 446
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 425 CSNCGKENHTAATCK-----MQKQNKPCFLCGSFKHRWKNCKQGQD----CFINKGSEHL 475
CSNCG+ H + CK ++ C C HR ++C Q + C S+H
Sbjct: 263 CSNCGEMGHISRACKQERVEFERVEIKCVNCSEVGHRARDCTQPRKSKFGCRNCGASDHK 322
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
A++C + N+ + C RC D+GH C A + K C C + HL
Sbjct: 323 AAEC---TEPPNMDNVECRRCNDTGHFAKDCPS---ASKVAKA-CRKCGAEDHLSRDCDQ 375
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ ++C NC ++GH G +C S + C CG+ GH RRC
Sbjct: 376 PQNMDLITCNNCDETGHYGRDCPKP-----RDWSRVKCTNCGEMGHTHRRC 421
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CG+ GH +C+ E + +I+C C GH + + + C NCG S H
Sbjct: 263 CSNCGEMGHISRACKQERVEFERVEIKCVNCSEVGHR-ARDCTQPRKSKFGCRNCGASDH 321
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK 591
EC E N N+ C +C GHFA+ C S K
Sbjct: 322 KAAECT---EPPN--MDNVECRRCNDTGHFAKDCPSASK 355
>gi|148666816|gb|EDK99232.1| cellular nucleic acid binding protein, isoform CRA_e [Mus musculus]
Length = 142
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 23/131 (17%)
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
R C++ C+ H+A DC + C CG GH C+ HAD+
Sbjct: 29 RIVICRRMVTCYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARDCD---HADEQ 82
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
K CY C FGH+ +V CY CG++GH+ C+ K S + CY+
Sbjct: 83 K---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS--------KTSEVNCYR 125
Query: 576 CGKEGHFARRC 586
CG+ GH AR C
Sbjct: 126 CGESGHLAREC 136
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 57/135 (42%), Gaps = 37/135 (27%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSE-HLASDCPGT 482
TC NCG+ H A CK K+ + + C N G HLA DC
Sbjct: 38 TCYNCGRGGHIAKDCKEPKRER------------------EQCCYNCGKPGHLARDCDHA 79
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
D+ C CG+ GH D K++CY C GH+ +N S +V
Sbjct: 80 DEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCS--KTSEV 121
Query: 543 SCYNCGQSGHLGPEC 557
+CY CG+SGHL EC
Sbjct: 122 NCYRCGESGHLAREC 136
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P + C NCGK H A C + K C+ CG F H K+C + + C+ + H+
Sbjct: 54 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKVK-CYRCGETGHV 111
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE 509
A +C T + N C RCG+SGH C E
Sbjct: 112 AINCSKTSEVN------CYRCGESGHLARECTIE 139
>gi|15229296|ref|NP_189935.1| Zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
gi|7288027|emb|CAB81789.1| hypothetical protein [Arabidopsis thaliana]
gi|332644278|gb|AEE77799.1| Zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
Length = 260
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 386 AKDKVEDARKENEAKYNVVLRMLLRKPRYFDP--PGWNSETCSNCGKENHTAATC-KMQK 442
+D V ++ E N V+ LLR RYFDP GW TC +CG+++H +C +
Sbjct: 106 VEDVVRGEEEDGETTSNSVMTKLLRGARYFDPLDAGW--VTCYSCGEKDHITVSCPTLTN 163
Query: 443 QNKPCFLCGSFKHRWKNCKQGQDCFINKG 471
K CF+C S +H + C + D N G
Sbjct: 164 CRKSCFICASLEHGARQCTKVWDIDANLG 192
>gi|345561223|gb|EGX44319.1| hypothetical protein AOL_s00193g47 [Arthrobotrys oligospora ATCC
24927]
Length = 180
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 57/144 (39%), Gaps = 26/144 (18%)
Query: 464 QDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEY------------- 510
+ C+ +G H+ +DCP +S C CG GH +C G
Sbjct: 10 KQCYHCQGLGHVQADCPTLRINGGATSGRCYSCGQPGHLARNCPGNQRFQGGGFNGRNNM 69
Query: 511 --HADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKK 568
+A + CY C H + + + CY CG+ GH+ + C A NG
Sbjct: 70 RGYASAPRPATCYKCGGPNHY----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGP 121
Query: 569 SNL---ICYKCGKEGHFARRCGSN 589
N CY+CG+ GH +R C N
Sbjct: 122 LNTAGKTCYRCGEAGHISRDCPQN 145
Score = 47.0 bits (110), Expect = 0.029, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 34/153 (22%)
Query: 440 MQKQNKPCFLCGSFKHRWKNC--------KQGQDCFINKGSEHLASDCPGTDQ----GNN 487
+++ K C+ C H +C C+ HLA +CPG + G N
Sbjct: 5 IRQTTKQCYHCQGLGHVQADCPTLRINGGATSGRCYSCGQPGHLARNCPGNQRFQGGGFN 64
Query: 488 LSSNF-----------CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CV-- 532
+N C +CG H C+ + ++CY C GH+ C
Sbjct: 65 GRNNMRGYASAPRPATCYKCGGPNHYARDCQAQ-------AMKCYACGKLGHISRDCTAP 117
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
N + +CY CG++GH+ +C + N
Sbjct: 118 NGGPLNTAGKTCYRCGEAGHISRDCPQNATTSN 150
Score = 41.6 bits (96), Expect = 1.5, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 22/110 (20%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNK--------------------PCFLCGSFKHRWK 458
G S C +CG+ H A C ++ + C+ CG H +
Sbjct: 33 GATSGRCYSCGQPGHLARNCPGNQRFQGGGFNGRNNMRGYASAPRPATCYKCGGPNHYAR 92
Query: 459 NCK-QGQDCFINKGSEHLASDCPGTDQGN-NLSSNFCLRCGDSGHDLSSC 506
+C+ Q C+ H++ DC + G N + C RCG++GH C
Sbjct: 93 DCQAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYRCGEAGHISRDC 142
Score = 39.7 bits (91), Expect = 5.4, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---------KQGQDCFINKGSEH 474
TC CG NH A C Q Q C+ CG H ++C G+ C+ + H
Sbjct: 80 TCYKCGGPNHYARDC--QAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYRCGEAGH 137
Query: 475 LASDCPGTDQGNN 487
++ DCP +N
Sbjct: 138 ISRDCPQNATTSN 150
>gi|67423413|dbj|BAD99524.1| VASA RNA helicase [Moina macrocopa]
Length = 843
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF + H++ +CP + N S C CGDSGH C + + CY C+
Sbjct: 204 CFNCGDTNHMSRECPNPKKEGN-SRGTCYNCGDSGHMSRECPNP-KKESSSRGTCYNCQQ 261
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECAN---SCEALNGKKSNLICYKCGKEG 580
GH+ C N + + C NCG+ GH+ EC + + N C+ CG+EG
Sbjct: 262 EGHMSKDCPNPKV--ERSRGCRNCGEDGHMARECPSKNGDGNGGGDRGGNRACFNCGEEG 319
Query: 581 HFARRC 586
H ++ C
Sbjct: 320 HQSKDC 325
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQS 550
C CGD+ H C + + CY C GH+ C N + +CYNC Q
Sbjct: 204 CFNCGDTNHMSRECPNPKKEGNSRGT-CYNCGDSGHMSRECPNPKKESSSRGTCYNCQQE 262
Query: 551 GHLGPECANS-CEALNGKKSNLICYKCGKEGHFARRCGS 588
GH+ +C N E G C CG++GH AR C S
Sbjct: 263 GHMSKDCPNPKVERSRG------CRNCGEDGHMARECPS 295
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 61/179 (34%), Gaps = 35/179 (19%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQN----KPCFLCGSFKHRWKNCKQGQ-------DCF 467
G S C NCG NH + C K+ C+ CG H + C + C+
Sbjct: 198 GGGSRGCFNCGDTNHMSRECPNPKKEGNSRGTCYNCGDSGHMSRECPNPKKESSSRGTCY 257
Query: 468 INKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFG 527
+ H++ DCP S C CG+ GH C + + +
Sbjct: 258 NCQQEGHMSKDCPNPKV---ERSRGCRNCGEDGHMARECPSKNGDGNGGGDR-------- 306
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+C+NCG+ GH +C + G C++C H A+ C
Sbjct: 307 -----------GGNRACFNCGEEGHQSKDCEKPRTSKGGGGG--ACFRCQSTDHMAKDC 352
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 18/77 (23%)
Query: 422 SETCSNCGKENHTAATCKMQ----------KQNKPCFLCGSFKHRWKNCKQ--------G 463
S C NCG++ H A C + N+ CF CG H+ K+C++ G
Sbjct: 277 SRGCRNCGEDGHMARECPSKNGDGNGGGDRGGNRACFNCGEEGHQSKDCEKPRTSKGGGG 336
Query: 464 QDCFINKGSEHLASDCP 480
CF + ++H+A DCP
Sbjct: 337 GACFRCQSTDHMAKDCP 353
>gi|85098402|ref|XP_960605.1| hypothetical protein NCU08923 [Neurospora crassa OR74A]
gi|28922111|gb|EAA31369.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 183
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 37/181 (20%)
Query: 445 KPCFLCGSFKHRWKNC--KQGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGH 501
+ CF CG H+ ++C K C+ N G+E H++ DCP +G ++ C RCG +GH
Sbjct: 11 RACFTCGQTTHQARDCPNKGAAKCY-NCGNEGHMSRDCP---EGPKDNARTCYRCGQTGH 66
Query: 502 DLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIG-------------LKQVSCY 545
C + +CY C GH+ C + G Q +CY
Sbjct: 67 ISRDCS-QSGGGQSSGAECYKCGEVGHIARNCSKGGASYGGGYQNSGYGGGFGGPQKTCY 125
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFTAER 605
+CG GH+ +C +NG K CY CG+ GHF+R C KD + + ++
Sbjct: 126 SCGGIGHMSRDC------VNGSK----CYNCGESGHFSRDC---PKDSGSGEKICYKCQQ 172
Query: 606 P 606
P
Sbjct: 173 P 173
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 34/187 (18%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHLA 476
+ C CG+ H A C + K C+ CG+ H ++C +G + C+ + H++
Sbjct: 10 TRACFTCGQTTHQARDCPNKGAAK-CYNCGNEGHMSRDCPEGPKDNARTCYRCGQTGHIS 68
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE-------GEYH------ADDLKKIQCYIC 523
DC + G + + C +CG+ GH +C G Y + CY C
Sbjct: 69 RDCSQSGGGQSSGAE-CYKCGEVGHIARNCSKGGASYGGGYQNSGYGGGFGGPQKTCYSC 127
Query: 524 KSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
GH+ CVN S CYNCG+SGH +C ++ +G+K ICYKC + GH
Sbjct: 128 GGIGHMSRDCVNGS-------KCYNCGESGHFSRDCPK--DSGSGEK---ICYKCQQPGH 175
Query: 582 FARRCGS 588
+C S
Sbjct: 176 VQSQCPS 182
>gi|284434488|gb|ADB85258.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1711
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 76/202 (37%), Gaps = 44/202 (21%)
Query: 425 CSNCGKENHTAATCKMQKQNKP--CFLCGSFKHRWKNCKQ------GQDCFI---NKGSE 473
C +CG++ H A C +KQ + CF C S H +C Q + + N +E
Sbjct: 292 CFSCGEKGHFANRCPQRKQGQEIRCFYCASLGHHMNSCPQRNIEEPANNVIVTNLNLDNE 351
Query: 474 HLASDCPGTDQG---NNLSSN------FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICK 524
L D P Q LSSN C CG +GH C D +++ C+ C
Sbjct: 352 ELIKD-PSKKQAVPAEVLSSNPEALPNVCFECGKTGHVAQLCPPL--RQDARRV-CFTCG 407
Query: 525 SFGHLCCV-------------NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNG----- 566
+GH C S + V+C +CG+ GH +C C +
Sbjct: 408 QYGHYCYTCPVPYCSYCEEHHQSEDCPMNLVACTHCGEKGHQADKCCADCPNCDKDHQPG 467
Query: 567 --KKSNLICYKCGKEGHFARRC 586
S + C+ C + H + C
Sbjct: 468 ECPMSKVTCFLCEGQDHCPKDC 489
>gi|121702271|ref|XP_001269400.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
gi|119397543|gb|EAW07974.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
Length = 177
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 71/184 (38%), Gaps = 43/184 (23%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG + H + C + + K C+ CG + H+
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGV-------------------AGHI 62
Query: 476 ASDCPGTDQGNNLSSNF------CLRCGDSGHDLSSCE-------GEYHADDLKKIQCYI 522
+ +CP + G+N C +CG GH +C G ++ CY
Sbjct: 63 SRECPQSGAGDNYGGPSTGGGQECYKCGQVGHIARNCSQGGNYGGGYGGGFGGRQQTCYS 122
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
C FGH+ G K CYNCG+ GH+ +C K +CYKC + GH
Sbjct: 123 CGGFGHM--ARDCTQGQK---CYNCGEVGHVSRDCPTE------AKGERVCYKCKQPGHV 171
Query: 583 ARRC 586
C
Sbjct: 172 QAAC 175
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 16/105 (15%)
Query: 414 YFDPPGWNSETCSNCGKENHTAATCKM------------QKQNKPCFLCGSFKHRWKNCK 461
Y P + C CG+ H A C + + C+ CG F H ++C
Sbjct: 75 YGGPSTGGGQECYKCGQVGHIARNCSQGGNYGGGYGGGFGGRQQTCYSCGGFGHMARDCT 134
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
QGQ C+ H++ DCP +G + C +C GH ++C
Sbjct: 135 QGQKCYNCGEVGHVSRDCPTEAKGERV----CYKCKQPGHVQAAC 175
>gi|448086305|ref|XP_004196068.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
gi|359377490|emb|CCE85873.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
Length = 178
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 73/178 (41%), Gaps = 29/178 (16%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-----CFINKGSEHLASD 478
TC CG+ H A C Q+Q + C+ C H +C Q + C+ HL +
Sbjct: 8 TCYKCGEVGHLADNC--QQQERLCYNCREAGHESNDCPQPKQASQKQCYSCGDLGHLQGE 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGH---DLSSCEGEYH-------ADDLKKIQCYICKSFGH 528
CP QG+ C CG GH SS G+ A K CY C H
Sbjct: 66 CPTQSQGSK-----CYNCGQFGHISKQCSSASGQAAVPKKANGARFPKAATCYKCGGPNH 120
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GL V CY CG++GH+ EC A +G CY+CG+ GH ++ C
Sbjct: 121 F--ARDCQAGL--VKCYACGKTGHISKECP---AAASGDSLAKACYQCGQVGHISKEC 171
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 53/162 (32%), Gaps = 50/162 (30%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ--GQ---------- 464
P + + C +CG H C Q Q C+ CG F H K C GQ
Sbjct: 45 PKQASQKQCYSCGDLGHLQGECPTQSQGSKCYNCGQFGHISKQCSSASGQAAVPKKANGA 104
Query: 465 ------DCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
C+ G H A DC Q + C CG +GH C D L K
Sbjct: 105 RFPKAATCYKCGGPNHFARDC----QAGLVK---CYACGKTGHISKECPAAASGDSLAK- 156
Query: 519 QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+CY CGQ GH+ EC N+
Sbjct: 157 ------------------------ACYQCGQVGHISKECENA 174
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 20/99 (20%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS---CYNCGQ 549
C +CG+ GH +C+ ++ CY C+ GH ++ KQ S CY+CG
Sbjct: 9 CYKCGEVGHLADNCQ-------QQERLCYNCREAGH---ESNDCPQPKQASQKQCYSCGD 58
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
GHL EC G K CY CG+ GH +++C S
Sbjct: 59 LGHLQGECPTQ---SQGSK----CYNCGQFGHISKQCSS 90
>gi|426249735|ref|XP_004018605.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Ovis
aries]
Length = 169
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C+ CG K+ +G C+ H+A DC + C CG GH C
Sbjct: 47 CYRCGESGPPAKDWIRGGPCYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARDC 103
Query: 507 EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNG 566
+ HAD+ K CY C FGH+ +V CY CG++GH+ C+
Sbjct: 104 D---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCS-------- 143
Query: 567 KKSNLICYKCGKEGHFARRC 586
K S + CY+CG+ GH AR C
Sbjct: 144 KTSEVNCYRCGESGHLAREC 163
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 63/140 (45%), Gaps = 26/140 (18%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSE-HLAS 477
+ C CG+ A K + PC+ CG H K+CK+ + C N G HLA
Sbjct: 45 DICYRCGESGPPA---KDWIRGGPCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 101
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DC D+ C CG+ GH D K++CY C GH+ +N S
Sbjct: 102 DCDHADEQK------CYSCGEFGHI---------QKDCTKVKCYRCGETGHVA-INCSKT 145
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 146 --SEVNCYRCGESGHLAREC 163
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 26/114 (22%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG SGH C ++ + L I CY C G
Sbjct: 1 MSSNECFKCGRSGHWARECPAGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESG----- 54
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ ++ CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 55 PPAKDWIRGGPCYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 103
>gi|380489650|emb|CCF36563.1| cellular nucleic acid-binding protein [Colletotrichum higginsianum]
Length = 275
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 59/136 (43%), Gaps = 16/136 (11%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-PCFLCGSFKHRWKNC----KQGQDCFINKGSE--HLA 476
TC NCG+E H C + +K C CG H+ C K G D NK E H +
Sbjct: 99 TCYNCGEEGHRVRDCPTPRVDKFACKNCGQSGHKVSECPEPRKAGADVECNKCHEMGHFS 158
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DCP QG C CG+ GH C + +KI+C C GHL
Sbjct: 159 RDCP---QGGGGGGRACHNCGNEGHMSRECP------EPRKIKCRNCDEEGHLSKDCDKP 209
Query: 537 IGLKQVSCYNCGQSGH 552
I + ++ C NCG+ GH
Sbjct: 210 IDVSRIKCNNCGEMGH 225
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 90/240 (37%), Gaps = 42/240 (17%)
Query: 382 RVIEAKDKVEDARKENEAKYNVVLRMLLRKPRYFDPPGWNS------------------- 422
RV+ D + E KY V R + R + W S
Sbjct: 10 RVLAPTHTNMDLQGNLEKKYTVQYRFSAQPDRQREKAAWPSSPEENMARLEDAGEPVSRL 69
Query: 423 -ETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQ-DCFINKG---S 472
+ CSNC + H + +C + K C+ CG HR ++C + D F K S
Sbjct: 70 MQKCSNCNELGHISKSCPQEAMEKARVTITCYNCGEEGHRVRDCPTPRVDKFACKNCGQS 129
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCV 532
H S+CP + + C +C + GH C C+ C + GH+
Sbjct: 130 GHKVSECPEPRKAG--ADVECNKCHEMGHFSRDCP---QGGGGGGRACHNCGNEGHM--- 181
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
+ +++ C NC + GHL +C + S + C CG+ GH + RC S K+
Sbjct: 182 SRECPEPRKIKCRNCDEEGHLSKDCDKPIDV-----SRIKCNNCGEMGHKSYRCPSPPKE 236
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 46/126 (36%), Gaps = 21/126 (16%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C C + GH SC E I CY C GH + + + +C NCGQSGH
Sbjct: 73 CSNCNELGHISKSCPQEAMEKARVTITCYNCGEEGHRV-RDCPTPRVDKFACKNCGQSGH 131
Query: 553 LGPEC-----------ANSCEAL---------NGKKSNLICYKCGKEGHFARRCGSNFKD 592
EC N C + G C+ CG EGH +R C K
Sbjct: 132 KVSECPEPRKAGADVECNKCHEMGHFSRDCPQGGGGGGRACHNCGNEGHMSRECPEPRKI 191
Query: 593 RLRISD 598
+ R D
Sbjct: 192 KCRNCD 197
>gi|358390183|gb|EHK39589.1| hypothetical protein TRIATDRAFT_302941 [Trichoderma atroviride IMI
206040]
Length = 176
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 75/178 (42%), Gaps = 26/178 (14%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSEHLASDC 479
C +CG H A C + K C+ CG H ++C K + C+ H++ DC
Sbjct: 8 ACYSCGNAGHQARDCPTKGPAK-CYNCGGEGHLSRDCTEPMKDNKSCYKCGQPGHISRDC 66
Query: 480 PGTDQGNNLSSNF-CLRCGDSGHDLSSCE----------GEYHADDLKKIQCYICKSFGH 528
P + C +CG+ GH SC G CY C +GH
Sbjct: 67 PQAGAAGGGQAGTECYKCGEKGHIARSCPKSGFGGNSYGGNSGYGGGAGKTCYSCGGYGH 126
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ + G+K CYNCG+SGH +C EA G+K ICYKC + GH +C
Sbjct: 127 M--SRECVNGMK---CYNCGESGHYSRDCPK--EAAGGEK---ICYKCQQGGHVQAQC 174
>gi|241780604|ref|XP_002400201.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
gi|215510686|gb|EEC20139.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
Length = 181
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQ-DCFINKGSEHLAS 477
G + +C NCGK H A CK +Q K C++C H ++C+Q + C++ H++
Sbjct: 47 GPDEMSCYNCGKMGHIARECK--EQEKTCYICHKQGHISRDCEQDERRCYLCGKLGHISR 104
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DCP +++ + C CG GH C E +D CY C GH+ +
Sbjct: 105 DCPSSERDDRK----CYNCGHLGHISRDCP-EAGGNDTVADVCYRCNERGHI--ARNCRS 157
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
CY+CG+ GHL EC
Sbjct: 158 TRTNNRCYHCGEVGHLAREC 177
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLS 504
C+ C H ++CK+ +D C+ G+ H++ DC G D+ + C CG GH
Sbjct: 11 CYKCNRIGHFARDCKEAEDRCYRCNGTGHISKDCQHGPDEMS------CYNCGKMGHIAR 64
Query: 505 SC------------EGEYHAD-DLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQ 549
C +G D + + +CY+C GH+ C +S K CYNCG
Sbjct: 65 ECKEQEKTCYICHKQGHISRDCEQDERRCYLCGKLGHISRDCPSSERDDRK---CYNCGH 121
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
GH+ +C EA +CY+C + GH AR C S
Sbjct: 122 LGHISRDCP---EAGGNDTVADVCYRCNERGHIARNCRS 157
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +C GH C+ A+D +CY C GH+ G ++SCYNCG+ GH
Sbjct: 11 CYKCNRIGHFARDCK---EAED----RCYRCNGTGHI--SKDCQHGPDEMSCYNCGKMGH 61
Query: 553 LGPECA---NSCEALNGKKSNLI---------CYKCGKEGHFARRCGSNFKD 592
+ EC +C + K+ ++ CY CGK GH +R C S+ +D
Sbjct: 62 IARECKEQEKTCYICH-KQGHISRDCEQDERRCYLCGKLGHISRDCPSSERD 112
>gi|224137012|ref|XP_002322472.1| predicted protein [Populus trichocarpa]
gi|222869468|gb|EEF06599.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K G CFI K +H+A CP D+ + CL C GH L C + + + + + C
Sbjct: 73 KPGDSCFICKAKDHIAKLCPQKDEWE--KNKICLLCRHRGHSLKRCP-KKNDETMDQKLC 129
Query: 521 YICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
Y C GH C G K +C+ C + GHL +C + + K C CG
Sbjct: 130 YNCGETGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKGG--CCKLCG 187
Query: 578 KEGHFARRC 586
H AR C
Sbjct: 188 GVTHLARDC 196
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 65/174 (37%), Gaps = 31/174 (17%)
Query: 392 DARKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQ---KQNKPCF 448
D + N+A + LR P PG ++C C ++H A C + ++NK C
Sbjct: 50 DPKDPNKANKKGFRKQPLRVPGMK--PG---DSCFICKAKDHIAKLCPQKDEWEKNKICL 104
Query: 449 LCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG 508
LC H K C + D + C CG++GH LS C
Sbjct: 105 LCRHRGHSLKRCPKKND--------------------ETMDQKLCYNCGETGHSLSQCPQ 144
Query: 509 EYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
K C+IC GHL C N+ I K C CG HL +C +
Sbjct: 145 PREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKGGCCKLCGGVTHLARDCPD 198
>gi|343417191|emb|CCD20113.1| nucleic acid binding protein, putative [Trypanosoma vivax Y486]
Length = 502
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 59/152 (38%), Gaps = 39/152 (25%)
Query: 425 CSNCGKENHTAATC-------------------KMQKQNKPCFLCGSFKHRWKNCKQGQD 465
C +CG +H A C M Q + CF CG F H + C + +
Sbjct: 56 CRSCGSSSHAQAKCPERIKSVECFQCHQKGHMMPMCPQTR-CFNCGHFGHSSQLCAKKRA 114
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF H +++C D G C RC + GHD++ C + +C++C
Sbjct: 115 CFHFSMPGHTSTECTRKDMG-----RLCYRCKEPGHDMAKCP--------QSPRCHMCNQ 161
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
GHL + +V C C Q GH+ C
Sbjct: 162 TGHL------VAQCPEVLCNRCHQKGHMASAC 187
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 52/170 (30%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLA 476
P S C C ++ H C + CF CG F H + C + + CF H +
Sbjct: 70 PERIKSVECFQCHQKGHMMPMCPQTR----CFNCGHFGHSSQLCAKKRACFHFSMPGHTS 125
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
++C D G C RC + GHD++ C
Sbjct: 126 TECTRKDMGR-----LCYRCKEPGHDMAKCP----------------------------- 151
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ C+ C Q+GHL +C ++C +C ++GH A C
Sbjct: 152 ---QSPRCHMCNQTGHLVAQCPE-----------VLCNRCHQKGHMASAC 187
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 25/127 (19%)
Query: 474 HLASDCPGTDQGNNLSSNF--CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
H DCP + ++ C CG S H + C + +K ++C+ C GH+
Sbjct: 35 HFKEDCPHRRKRPRADNDIGICRSCGSSSHAQAKC-----PERIKSVECFQCHQKGHM-- 87
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECAN--SC--EALNGKKSN--------LICYKCGKE 579
+ Q C+NCG GH CA +C ++ G S +CY+C +
Sbjct: 88 ----MPMCPQTRCFNCGHFGHSSQLCAKKRACFHFSMPGHTSTECTRKDMGRLCYRCKEP 143
Query: 580 GHFARRC 586
GH +C
Sbjct: 144 GHDMAKC 150
>gi|156337146|ref|XP_001619808.1| hypothetical protein NEMVEDRAFT_v1g782 [Nematostella vectensis]
gi|156203704|gb|EDO27708.1| predicted protein [Nematostella vectensis]
Length = 624
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 53/128 (41%), Gaps = 20/128 (15%)
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC- 530
S H A DCP QG S C +C + GH C D +C+ C GH
Sbjct: 42 SGHFARDCP---QGGGGGSRTCHKCNEEGHFARECPNA----DSGGNKCFKCNESGHFAR 94
Query: 531 -CVNSSIIGLKQV------SCYNCGQSGHLGPECANS-----CEALNGKKSNLICYKCGK 578
C NS G +CY C ++GH EC N+ G S+ C+KC +
Sbjct: 95 ECPNSGGGGGGFGGGSSGSTCYKCNETGHFARECPNAESNGGGFGGGGGSSDSTCFKCQQ 154
Query: 579 EGHFARRC 586
GHFAR C
Sbjct: 155 TGHFAREC 162
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQS 550
C +CG+SGH C C+ C GH C N+ G K C+ C +S
Sbjct: 36 CRKCGESGHFARDCP---QGGGGGSRTCHKCNEEGHFARECPNADSGGNK---CFKCNES 89
Query: 551 GHLGPECANSCEALNGKKSNL---ICYKCGKEGHFARRC 586
GH EC NS G CYKC + GHFAR C
Sbjct: 90 GHFARECPNSGGGGGGFGGGSSGSTCYKCNETGHFAREC 128
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 48/137 (35%), Gaps = 24/137 (17%)
Query: 447 CFLCGSFKHRWKNCKQG-----QDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
C CG H ++C QG + C H A +CP D G N C +C +SGH
Sbjct: 36 CRKCGESGHFARDCPQGGGGGSRTCHKCNEEGHFARECPNADSGGNK----CFKCNESGH 91
Query: 502 DLSSCEGEYHADDLKKI-----QCYICKSFGHLC--CVNS--------SIIGLKQVSCYN 546
C CY C GH C N+ G +C+
Sbjct: 92 FARECPNSGGGGGGFGGGSSGSTCYKCNETGHFARECPNAESNGGGFGGGGGSSDSTCFK 151
Query: 547 CGQSGHLGPECANSCEA 563
C Q+GH EC N A
Sbjct: 152 CQQTGHFARECPNESAA 168
>gi|318087050|gb|ADV40117.1| putative E3 ubiquitin ligase [Latrodectus hesperus]
Length = 175
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 62/144 (43%), Gaps = 21/144 (14%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG--------QDCFINKGSEHL 475
+C NCG+ H A C+ + +K C+ CG H ++C QG C+ H
Sbjct: 41 SCYNCGRSGHFARECR--ESDKTCYSCGKSGHISRDCTQGGGGGSDRKMTCYTCGKPGHA 98
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVN 533
+ DCP N C CGD+GH C +A D CY C GH+ C N
Sbjct: 99 SRDCP-----NERDDRKCYSCGDTGHISRDCPEGGNAGDNDDTVCYRCNESGHIARNCRN 153
Query: 534 SSIIGLKQVSCYNCGQSGHLGPEC 557
S CY+CG+ GH+ EC
Sbjct: 154 S----RPSNKCYSCGEVGHIAREC 173
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC---GSNFKDRLRIS 597
+ SCYNCG+SGH EC ++S+ CY CGK GH +R C G DR
Sbjct: 39 RASCYNCGRSGHFAREC---------RESDKTCYSCGKSGHISRDCTQGGGGGSDRKMT- 88
Query: 598 DLLFTAERPPTRAR 611
+T +P +R
Sbjct: 89 --CYTCGKPGHASR 100
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 15/115 (13%)
Query: 488 LSSNFCLRCGDSGHDLSSC---------EGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
+SSN C +C SGH C + + CY C GH +
Sbjct: 1 MSSNECYKCHKSGHFARDCPSGDGGRGGGYRGDSRSSSRASCYNCGRSGHF----ARECR 56
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
+CY+CG+SGH+ +C G + CY CGK GH +R C + DR
Sbjct: 57 ESDKTCYSCGKSGHISRDCTQG--GGGGSDRKMTCYTCGKPGHASRDCPNERDDR 109
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD--------CFINKGSEHL 475
TC CGK H + C ++ ++ C+ CG H ++C +G + C+ S H+
Sbjct: 88 TCYTCGKPGHASRDCPNERDDRKCYSCGDTGHISRDCPEGGNAGDNDDTVCYRCNESGHI 147
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE 507
A +C N+ SN C CG+ GH CE
Sbjct: 148 ARNCR-----NSRPSNKCYSCGEVGHIARECE 174
>gi|388851384|emb|CCF54969.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Ustilago
hordei]
Length = 182
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 70/181 (38%), Gaps = 27/181 (14%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASDCP 480
TC NCG+ H AA C N C+ CG H C Q + C+ + H++ DCP
Sbjct: 6 TCFNCGQPGHNAAACPTAG-NPSCYNCGQQGHISSQCGMEAQPKTCYKCNETGHISRDCP 64
Query: 481 GTDQGNNLSSNF-CLRCGDSGHDLSSCE------GEYHADDLKKIQCYICKSFGHLC--C 531
C RCG GH +C CY C GHL C
Sbjct: 65 TNPAPAAGGPGGECYRCGQHGHIARACPDAGSSSRGGFGGARGGRSCYNCGGVGHLSRDC 124
Query: 532 VNSSIIGLKQVS------CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
+ + G + CYNC +SGH+ EC K CY+CG+EGH +
Sbjct: 125 TSPAGAGAGAGAGAGGQRCYNCNESGHISRECP--------KPQTKSCYRCGEEGHISSA 176
Query: 586 C 586
C
Sbjct: 177 C 177
>gi|225449579|ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding protein [Vitis vinifera]
gi|296086261|emb|CBI31702.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 76/200 (38%), Gaps = 36/200 (18%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
++P +F N C+NCG H AA C C+ C H C C +
Sbjct: 44 CKRPGHFARDCPNVTVCNNCGLPGHIAAECNSTTM---CWNCKESGHLASQCPNDPVCHM 100
Query: 469 NKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDLSSCE-----------GEYHADDL 515
HLA DC PG + + C C GH + C G D L
Sbjct: 101 CGKMGHLARDCSSPGLPAHD---ARLCNNCYKPGHIAADCTNEKACNNCHKTGHLARDCL 157
Query: 516 KKIQCYICKSFGHLC--CVNSSIIG-----LKQVSCYNCGQSGHLGPECANSCEALNGKK 568
+ C IC GH+ C S ++ + ++C+NCGQ GH+ +C
Sbjct: 158 NEPVCNICNISGHVARQCPKSRLVPETGGPFRDITCHNCGQPGHISRDCV---------- 207
Query: 569 SNLICYKCGKEGHFARRCGS 588
S +IC CG GH + C S
Sbjct: 208 SIVICNNCGGRGHQSFECPS 227
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 18/80 (22%)
Query: 520 CYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKS-------- 569
C CK GH C N ++ C NCG GH+ EC ++ N K+S
Sbjct: 41 CNKCKRPGHFARDCPNVTV-------CNNCGLPGHIAAECNSTTMCWNCKESGHLASQCP 93
Query: 570 -NLICYKCGKEGHFARRCGS 588
+ +C+ CGK GH AR C S
Sbjct: 94 NDPVCHMCGKMGHLARDCSS 113
>gi|255539441|ref|XP_002510785.1| actin depolymerizing factor, putative [Ricinus communis]
gi|223549900|gb|EEF51387.1| actin depolymerizing factor, putative [Ricinus communis]
Length = 498
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 55/141 (39%), Gaps = 26/141 (18%)
Query: 423 ETCSNCGKENHTAATCKMQ---KQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
E+C C ++H A C + ++NK C LC H K C +D
Sbjct: 78 ESCFICKAKDHIAKLCPQKAEWERNKICLLCRQRGHSLKRCPNKKD-------------- 123
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSI 536
N+ C CG++GH LS+C K C+IC GHL C N+
Sbjct: 124 ------ENVDRKLCYNCGETGHSLSNCPQPLKNGGTKYANCFICNESGHLSKDCPQNTRG 177
Query: 537 IGLKQVSCYNCGQSGHLGPEC 557
I K C CG HL +C
Sbjct: 178 IYPKGGCCKICGGVTHLARDC 198
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 425 CSNCGKENHTAATCKMQKQN-----KPCFLCGSFKHRWKNCKQ--------GQDCFINKG 471
C NCG+ H+ + C +N CF+C H K+C Q G C I G
Sbjct: 131 CYNCGETGHSLSNCPQPLKNGGTKYANCFICNESGHLSKDCPQNTRGIYPKGGCCKICGG 190
Query: 472 SEHLASDCPGTDQGNNLSSN 491
HLA DCP + +L+++
Sbjct: 191 VTHLARDCPEKGKRGSLAAS 210
>gi|342882084|gb|EGU82838.1| hypothetical protein FOXB_06641 [Fusarium oxysporum Fo5176]
Length = 181
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSEHLASDC 479
C +CG H A C + K C+ CG H ++C K + C+ H++ DC
Sbjct: 15 ACYSCGSTGHQARDCPTKGPAK-CYNCGGEGHMSRDCTEPMKDNKSCYKCGQPGHISRDC 73
Query: 480 P---GTDQGNNL--SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ---CYICKSFGHLC- 530
P G+ Q +S F L+ + +++SS G + CY C +GH+
Sbjct: 74 PMSGGSGQATECYKASLFVLQTTAAANNVSSSYGNNYGGGFGGGAGKTCYSCGGYGHMSR 133
Query: 531 -CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
CVN G+K CYNCG+SGH +C E+ G+K ICYKC + GH +C SN
Sbjct: 134 ECVN----GMK---CYNCGESGHYSRDCPK--ESAGGEK---ICYKCQQPGHVQSQCPSN 181
>gi|259484556|tpe|CBF80881.1| TPA: zinc knuckle domain protein (Byr3), putative (AFU_orthologue;
AFUA_1G07630) [Aspergillus nidulans FGSC A4]
Length = 171
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 72/181 (39%), Gaps = 36/181 (19%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG + H + C + + K C+ CG+ H + C Q + +E
Sbjct: 20 DCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGAVGHISRECPQAGE------NERP 73
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE-------GEYHADDLKKIQCYICKSFGH 528
A C +CG GH +C G ++ CY C FGH
Sbjct: 74 AG------------GQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGH 121
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+ G K CYNCG++GH+ +C K +CY+C + GH C +
Sbjct: 122 M--ARDCTQGQK---CYNCGETGHVSRDCPTE------AKGERVCYQCKQPGHIQSACPN 170
Query: 589 N 589
N
Sbjct: 171 N 171
>gi|449671299|ref|XP_002162674.2| PREDICTED: uncharacterized protein LOC100212542 [Hydra
magnipapillata]
Length = 512
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVS 543
N S C RC + GH C ++ K C+ C GH C N+ + +
Sbjct: 126 NETSKGACRRCNEEGHFAKDCTQAPASNGGNKGACHKCGGEGHFARECPNTETA-PRSGA 184
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
C+ CG+ GH +C S G C KC + GHFAR C N
Sbjct: 185 CHKCGEEGHFARQCPKS-----GPPGGGACRKCNEVGHFARECPQN 225
>gi|149237715|ref|XP_001524734.1| zinc-finger protein GIS2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451331|gb|EDK45587.1| zinc-finger protein GIS2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 178
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 57/145 (39%), Gaps = 15/145 (10%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
DP NS+ C +CG H C Q Q C+ CG F H KNC Q + G H
Sbjct: 44 DPKQTNSKQCYSCGDVGHIQTECPNQAQGTKCYNCGQFGHISKNCTQESN-----GQTHA 98
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCV 532
A + S C +CG H C+ ++CY C GH+ C
Sbjct: 99 APAFRKSYGRGPASGTTCYKCGGPNHFARDCQ-------AGNVKCYACGKAGHISKDCNS 151
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPEC 557
+CYNCG+ GH+ EC
Sbjct: 152 QGGAPNAGSKTCYNCGKPGHISKEC 176
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 66/178 (37%), Gaps = 35/178 (19%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H +C Q + C+ H + DCP Q N S C CGD GH +
Sbjct: 9 CYKCGEVGHVADDCTQEERLCYNCHKPGHESGDCPDPKQTN---SKQCYSCGDVGHIQTE 65
Query: 506 CEGEYHADDLKKIQCYICKSFGHLC--CVNSS------------IIGLKQVS---CYNCG 548
C + + +CY C FGH+ C S G S CY CG
Sbjct: 66 CP-----NQAQGTKCYNCGQFGHISKNCTQESNGQTHAAPAFRKSYGRGPASGTTCYKCG 120
Query: 549 QSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFTAERP 606
H +C + N+ CY CGK GH ++ C S S + +P
Sbjct: 121 GPNHFARDC---------QAGNVKCYACGKAGHISKDCNSQGGAPNAGSKTCYNCGKP 169
>gi|358057974|dbj|GAA96219.1| hypothetical protein E5Q_02883 [Mixia osmundae IAM 14324]
Length = 215
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 76/202 (37%), Gaps = 42/202 (20%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ-----GQDCFINKGS 472
P C CGK++H AA+C + K CF C S H C + C+ +G
Sbjct: 5 PARRPRGCFRCGKDDHLAASCP--SEVKLCFNCASPDHSLAECSEERKPMSMTCYNCQGQ 62
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADDL---------------- 515
H A+DC T+ C CG GH S+C +G+ L
Sbjct: 63 GHRAADC--TEARVARPEKLCYTCGQGGHVASACDQGQTAPAKLPAPVAEAPSRSKAPRQ 120
Query: 516 -KKIQCYICKSFGHLC--CVNSSIIGLKQVS--------CYNCGQSGHLGPECANSCEAL 564
+ + C+ C GH C + I ++ S C++CG HL C
Sbjct: 121 DRVLTCHRCGQDGHFARDCSAADPISPREPSARPPRTKTCHSCG-GAHL----IRDCPTA 175
Query: 565 NGKKSNLICYKCGKEGHFARRC 586
+ + CY CG GH +R C
Sbjct: 176 TDRPAAKTCYNCGLSGHLSRNC 197
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 68/168 (40%), Gaps = 33/168 (19%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF +HLA+ CP C C H L+ C E + CY C+
Sbjct: 12 CFRCGKDDHLAASCPS-------EVKLCFNCASPDHSLAECSEER---KPMSMTCYNCQG 61
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPEC-----------ANSCEALNGKKSN-- 570
GH C + + +++ CY CGQ GH+ C A EA + K+
Sbjct: 62 QGHRAADCTEARVARPEKL-CYTCGQGGHVASACDQGQTAPAKLPAPVAEAPSRSKAPRQ 120
Query: 571 ---LICYKCGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFVG 615
L C++CG++GHFAR C + IS +A P T+ H G
Sbjct: 121 DRVLTCHRCGQDGHFARDCSAADP----ISPREPSARPPRTKTCHSCG 164
>gi|121543757|gb|ABM55551.1| zinc finger protein-like protein [Maconellicoccus hirsutus]
Length = 142
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 26/146 (17%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE----YHADDLKKI 518
G C+ + + H A +CP + G + C +C GH C+ + Y +++ I
Sbjct: 4 GGMCYRCRETGHFARECPSFEPGKPIRREKCYKCNAFGHFARDCKEDQDRCYRCNEIGHI 63
Query: 519 -----------QCYICKSFGHLC--CVNSSIIGLKQVS--CYNCGQSGHLGPECANSCEA 563
QCY CK GH+ C +SS + S CYNC ++GH+ +C NS
Sbjct: 64 ARDCVRSDSSPQCYSCKGIGHIARDCPDSSSNNSRHFSANCYNCNKAGHMARDCPNS--- 120
Query: 564 LNGKKSNLICYKCGKEGHFARRCGSN 589
G K+ CY C K+GH +R C N
Sbjct: 121 -GGGKT---CYVCRKQGHISRDCPDN 142
>gi|354492644|ref|XP_003508457.1| PREDICTED: cellular nucleic acid-binding protein-like [Cricetulus
griseus]
Length = 172
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 42/164 (25%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C NCG+ +H A C +Q + C+ CG K+CK+ P
Sbjct: 45 DICYNCGESDHLAKDCDLQ-EGDACYNCGRGGLIAKDCKE-----------------PKR 86
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ NF G GH C+ HAD+ K CY C FGH+ V
Sbjct: 87 EREQCCCYNF----GKPGHLARDCD---HADEQK---CYSCSEFGHI------QKDCTSV 130
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CG+ GH+ C+ K S + CY+CG+ GH A+ C
Sbjct: 131 KCYRCGEPGHVATNCS--------KTSEVNCYRCGESGHLAQEC 166
>gi|407917903|gb|EKG11203.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 176
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 70/182 (38%), Gaps = 41/182 (22%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG++ H + C+ + KPC+ CG H + C +G + G E
Sbjct: 23 DCPTKGNPTCYNCGEQGHLSRDCQQPQAEKPCYRCGKVGHLSRECPEGGAPGMGAGQE-- 80
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ-----------CYICK 524
C +CG GH +C CY C
Sbjct: 81 -----------------CYKCGKVGHIARNCNSYGGGFGGGYGGGSGFGGPRGQTCYSCG 123
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
+GH+ G K CYNCG+ GHL +C + E N + +CYKC + GH
Sbjct: 124 GYGHM--SRDCTQGQK---CYNCGEVGHLSRDCPS--ETSNER----VCYKCKQPGHVQA 172
Query: 585 RC 586
C
Sbjct: 173 AC 174
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 39/96 (40%), Gaps = 14/96 (14%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV--SCYNCGQS 550
C CGD+ H C + CY C GHL S Q CY CG+
Sbjct: 11 CYNCGDTSHQARDCPTK------GNPTCYNCGEQGHL----SRDCQQPQAEKPCYRCGKV 60
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GHL EC G + CYKCGK GH AR C
Sbjct: 61 GHLSRECPEG--GAPGMGAGQECYKCGKVGHIARNC 94
>gi|427787167|gb|JAA59035.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 240
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Query: 415 FDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD---CFINKG 471
+ PP E C C + H A CK + C+ C H K+C+ G D C+
Sbjct: 54 YKPP--IREKCYKCNRIGHFARDCKEAEDR--CYRCNGTGHISKDCQHGPDEMSCYNCGK 109
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFGHLC 530
H+A +C ++ C C GH CE E + +QCY+C GH+
Sbjct: 110 MGHIARECKEQEK-------TCYICHKQGHISRDCEQDERRSGAGLSLQCYLCGKLGHIS 162
Query: 531 --CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
C NS K CYNCG GH+ +C EA +CY+C + GH AR C S
Sbjct: 163 RDCPNSERDDRK---CYNCGHLGHISRDCP---EAGGNDAVADVCYRCNERGHIARNCRS 216
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 18/148 (12%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQ---------DCFIN 469
G + +C NCGK H A CK +Q K C++C H ++C+Q + C++
Sbjct: 98 GPDEMSCYNCGKMGHIARECK--EQEKTCYICHKQGHISRDCEQDERRSGAGLSLQCYLC 155
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
H++ DCP +++ + C CG GH C E +D CY C GH+
Sbjct: 156 GKLGHISRDCPNSERDDRK----CYNCGHLGHISRDCP-EAGGNDAVADVCYRCNERGHI 210
Query: 530 CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+ CY+CG+ GHL EC
Sbjct: 211 --ARNCRSTRANNRCYHCGEVGHLAREC 236
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H A DC + + C RC +GH C+ H D ++ CY C GH+
Sbjct: 70 HFARDCKEAE-------DRCYRCNGTGHISKDCQ---HGPD--EMSCYNCGKMGHI---- 113
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
+ ++ +CY C + GH+ +C E +G +L CY CGK GH +R C ++ +D
Sbjct: 114 ARECKEQEKTCYICHKQGHISRDCEQD-ERRSGAGLSLQCYLCGKLGHISRDCPNSERD 171
>gi|358056756|dbj|GAA97419.1| hypothetical protein E5Q_04097 [Mixia osmundae IAM 14324]
Length = 735
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 78/223 (34%), Gaps = 60/223 (26%)
Query: 413 RYFD----P--PGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDC 466
RY+D P P ++ C CG++ H A C+ Q+ C CG+
Sbjct: 383 RYYDDEDGPARPRNDTVKCGRCGEQGHIAKDCEHQQ----CMTCGAM------------- 425
Query: 467 FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSF 526
+H DCP C RCG+ GH C + ++C C
Sbjct: 426 -----DDHEFRDCPLL--------KVCWRCGNKGHTNGKCNMP-----VASLRCPRCNQK 467
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH + NC + PE E K N CY CG GHF +C
Sbjct: 468 GH--------------ASDNCPTIWRVYPELP--LERHTAAKPNPCCYNCGHRGHFGEQC 511
Query: 587 GSNFKDRLRISD-LLFTAERPPTRARHF-VGSNGTPHGLGNAQ 627
+ SD +FT+ + PT R G PH L N Q
Sbjct: 512 PEPRGHPVASSDTTIFTSGQAPTSRRALPPGPARMPH-LVNGQ 553
>gi|357134970|ref|XP_003569087.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 945
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 437 TCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLR 495
T + + + C +CGS H +NC D S + G+ G N SS C +
Sbjct: 776 TSRATRYAQTCSVCGSNGHNAQNCPATMDDMHQPAPSVGFTASSYGSSAGGNASSGLCFK 835
Query: 496 CGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGP 555
C GH C G + S+G+ VN++ C+ C Q GH
Sbjct: 836 CNQPGHFSRDCPG-------------LTTSYGN-SAVNANA---SSNLCFKCNQPGHYSR 878
Query: 556 EC----ANSCEALNGKKSNLICYKCGKEGHFARRC 586
+C ++ + G +C+KC + GH+AR C
Sbjct: 879 DCPAQGSSYPSSAGGNSGANLCFKCNQPGHYARDC 913
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 100/265 (37%), Gaps = 49/265 (18%)
Query: 375 KKRRKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRYF--------------DPPGW 420
++ R + +++ K K E E KY + L PR+ PG
Sbjct: 668 QRARHQLFLLKLKVKEEIYNDEARVKYTIFKAEKLDDPRFLLGIIDRLLVEDDAGSTPGV 727
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
N +N G N A + N G G + F + S L++ P
Sbjct: 728 NHAAAANAGFTNSEAGQSVVTSNNTYAMNMG-----------GPNQFGQQAS--LSARVP 774
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC---YICKSFGHLCCVNSSII 537
T + + C CG +GH+ +C DD+ + + S+G N+S
Sbjct: 775 TTSRATRYAQT-CSVCGSNGHNAQNCPATM--DDMHQPAPSVGFTASSYGSSAGGNASS- 830
Query: 538 GLKQVSCYNCGQSGHLGPECANSC-----EALNGKKSNLICYKCGKEGHFARRC---GSN 589
GL C+ C Q GH +C A+N S+ +C+KC + GH++R C GS+
Sbjct: 831 GL----CFKCNQPGHFSRDCPGLTTSYGNSAVNANASSNLCFKCNQPGHYSRDCPAQGSS 886
Query: 590 FKDRL---RISDLLFTAERPPTRAR 611
+ ++L F +P AR
Sbjct: 887 YPSSAGGNSGANLCFKCNQPGHYAR 911
>gi|346320729|gb|EGX90329.1| zinc knuckle domain containing protein [Cordyceps militaris CM01]
Length = 296
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 69/196 (35%), Gaps = 44/196 (22%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASDC 479
C CG H A C + + C+ C H C + + C+ +G H+ +DC
Sbjct: 9 CYKCGNVGHYAEVCSSSE--RLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADC 66
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL------------------------ 515
P N +S C CG GH +C +
Sbjct: 67 PTLRLTGNATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGRGGYAGGNFGGRGGFAG 126
Query: 516 --KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL-- 571
+ CY C H + + + CY CG+ GH+ + C A NG N
Sbjct: 127 GPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAG 178
Query: 572 -ICYKCGKEGHFARRC 586
CY+CG+ GH +R C
Sbjct: 179 KTCYQCGEAGHISRDC 194
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS-- 543
++LS C +CG+ GH C + CY CK GH S+ L + +
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSSS-------ERLCYNCKQPGH----ESNGCPLPRTTEA 50
Query: 544 --CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY+C GH+ +C L G ++ CY CG+ GH AR C
Sbjct: 51 KQCYHCQGLGHVQADCPT--LRLTGNATSGRCYNCGQPGHLARAC 93
>gi|432846337|ref|XP_004065887.1| PREDICTED: zinc finger CCHC domain-containing protein 7-like
[Oryzias latipes]
Length = 592
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 70/185 (37%), Gaps = 48/185 (25%)
Query: 383 VIEAKDKVEDARKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQK 442
++ KDK +A+ N+ K + R L+ RY+ G N C NC K H + C K
Sbjct: 260 LVSEKDK--EAQIYNKEKSSRTTRQFLQN-RYYT--GKNIH-CKNCNKTGHLSKNCPEPK 313
Query: 443 QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHD 502
+ PCFLCG+ HL +CP + C CG GH
Sbjct: 314 KLVPCFLCGA-------------------PGHLVIECP---------NKHCNNCGHPGHL 345
Query: 503 LSSC-EGEYHADDLKKIQCYICKSFGHLCCVNSSI--------IGLKQVSCYNCGQSGHL 553
+SC E Y QC+ C GH + +G CYNC + GH
Sbjct: 346 FNSCSEKPYWYK-----QCHRCSMKGHFLDTENGPPVKKQAEDMGRSPAYCYNCSKKGHF 400
Query: 554 GPECA 558
G C
Sbjct: 401 GYACT 405
>gi|395754126|ref|XP_003779713.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Pongo abelii]
Length = 170
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 63/145 (43%), Gaps = 28/145 (19%)
Query: 447 CFLCGSFKHRWKNCKQ-GQDCFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG KNC G C+ S H+A DC P ++ + C CG GH
Sbjct: 47 CYCCGESSRHAKNCVLLGNICYNCGRSGHIAKDCKEPKRERHQH-----CYTCGRLGHLA 101
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C D K+ +CY C GH+ QV CY CG+ GH+ C+
Sbjct: 102 RDC------DRQKEQKCYSCGKLGHI------QKDCAQVKCYRCGEIGHVAINCS----- 144
Query: 564 LNGKKSNLICYKCGKEGHFARRCGS 588
K S + CY+CGK GH AR C S
Sbjct: 145 ---KASQVNCYRCGKSGHLARECPS 166
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ-----GQDCFINKGSEHLA 476
S TC CG+ + A C + C+ CG H K+CK+ Q C+ HLA
Sbjct: 44 SYTCYCCGESSRHAKNCVLL--GNICYNCGRSGHIAKDCKEPKRERHQHCYTCGRLGHLA 101
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DC + C CG GH D +++CY C GH+ +N S
Sbjct: 102 RDC------DRQKEQKCYSCGKLGHI---------QKDCAQVKCYRCGEIGHVA-INCS- 144
Query: 537 IGLKQVSCYNCGQSGHLGPEC 557
QV+CY CG+SGHL EC
Sbjct: 145 -KASQVNCYRCGKSGHLAREC 164
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C QK+ K C+ CG H K+C Q C+ H+A +C
Sbjct: 89 QHCYTCGRLGHLARDCDRQKEQK-CYSCGKLGHIQKDCAQ-VKCYRCGEIGHVAINCSKA 146
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGE 509
Q N C RCG SGH C E
Sbjct: 147 SQVN------CYRCGKSGHLARECPSE 167
>gi|452983542|gb|EME83300.1| hypothetical protein MYCFIDRAFT_136456, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 425
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 425 CSNCGKENHTAATCKMQKQNKP------CFLCGSFKHRWKNCKQGQDC----FINKGSE- 473
CSNC + H A C+ +KQ C +C + HR ++C Q + N GSE
Sbjct: 224 CSNCQQLGHIAKNCEQEKQEPAGKVVITCAVCNAEGHRARDCTQERKSDKRGCKNCGSED 283
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H+ +CP + + C CG+ GH + C E +++QC C +GH
Sbjct: 284 HMVKECP------TKAPDVCRNCGEEGHRKTECTNE------RQMQCRNCDKWGHASRDC 331
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +V C NC + GH +C + S + C C ++GH +RC
Sbjct: 332 PEPKNMDKVQCRNCDEFGHNSRDCPQPTDW-----SRVECSNCHEKGHTYKRC 379
>gi|297798314|ref|XP_002867041.1| hypothetical protein ARALYDRAFT_491032 [Arabidopsis lyrata subsp.
lyrata]
gi|297312877|gb|EFH43300.1| hypothetical protein ARALYDRAFT_491032 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 66/172 (38%), Gaps = 27/172 (15%)
Query: 425 CSNCGKENHTAATCKMQKQNKP---CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPG 481
C NCG+ H ++ C+ CG H ++C Q + G + A+ G
Sbjct: 101 CYNCGELGHIGGGSGGGERGSRREGCYNCGDAGHFARDCTQKS---VGNGDQRGAAG-AG 156
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEGE-----YHADDLKKIQCYICKSFGHLCCVNSSI 536
D C CGD GH C + CY C GH +
Sbjct: 157 KDG--------CYNCGDIGHFARDCGNQKVTAGSVRSGGGSGSCYTCGGVGH---IAREC 205
Query: 537 IGLKQVS--CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+Q S CY CG SGHL +C NG + CY CGKEGHFAR C
Sbjct: 206 ATKRQPSRGCYQCGGSGHLARDCDQRASGGNGGGNK--CYSCGKEGHFAREC 255
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 14/104 (13%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQK----------QNKPCFLCGSFKHRWKNC----KQ 462
G + C NCG H A C QK + C+ CG H + C +
Sbjct: 152 AAGAGKDGCYNCGDIGHFARDCGNQKVTAGSVRSGGGSGSCYTCGGVGHIARECATKRQP 211
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
+ C+ GS HLA DC G N N C CG GH C
Sbjct: 212 SRGCYQCGGSGHLARDCDQRASGGNGGGNKCYSCGKEGHFAREC 255
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 42/112 (37%), Gaps = 28/112 (25%)
Query: 520 CYICKSFGHLC--CVNSSI--------IGLKQVSCYNCGQSGHLGPECAN---SCEALNG 566
CY C GH C S+ G + CYNCG GH +C N + ++
Sbjct: 126 CYNCGDAGHFARDCTQKSVGNGDQRGAAGAGKDGCYNCGDIGHFARDCGNQKVTAGSVRS 185
Query: 567 KKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGSNG 618
+ CY CG GH AR C +R P+R + G +G
Sbjct: 186 GGGSGSCYTCGGVGHIAREC---------------ATKRQPSRGCYQCGGSG 222
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 520 CYICKSFGHLCCVNSSIIGLKQVS-CYNCGQSGHLGPECANSCEALNGKKSNLI------ 572
CY C GH+ + + CYNCG +GH +C NG +
Sbjct: 101 CYNCGELGHIGGGSGGGERGSRREGCYNCGDAGHFARDCTQK-SVGNGDQRGAAGAGKDG 159
Query: 573 CYKCGKEGHFARRCG 587
CY CG GHFAR CG
Sbjct: 160 CYNCGDIGHFARDCG 174
>gi|336269017|ref|XP_003349270.1| hypothetical protein SMAC_05554 [Sordaria macrospora k-hell]
gi|380089843|emb|CCC12376.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 184
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 37/184 (20%)
Query: 443 QNKPCFLCGSFKHRWKNC--KQGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDS 499
Q + CF CG H+ ++C K C+ N G+E H++ DCP +G ++ C RCG +
Sbjct: 8 QARACFTCGQTTHQARDCPNKGAAKCY-NCGNEGHMSRDCP---EGPKDNARTCYRCGQT 63
Query: 500 GHDLSSCEGEYHADDLKK-IQCYICKSFGHL---CCVNSSIIG-------------LKQV 542
GH C +CY C GH+ C + G
Sbjct: 64 GHISRDCSQSGGQGGQSSGAECYKCGEVGHIARNCSKGGAAYGGGFQNSGYGGGFGGPAK 123
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFT 602
+CY+CG GH+ +C +NG K CY CG+ GHF+R C KD + +
Sbjct: 124 TCYSCGGIGHMSRDC------VNGSK----CYNCGESGHFSRDC---PKDSGSGEKICYK 170
Query: 603 AERP 606
++P
Sbjct: 171 CQQP 174
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 34/188 (18%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHLA 476
+ C CG+ H A C + K C+ CG+ H ++C +G + C+ + H++
Sbjct: 9 ARACFTCGQTTHQARDCPNKGAAK-CYNCGNEGHMSRDCPEGPKDNARTCYRCGQTGHIS 67
Query: 477 SDCPGTDQGNNLSSNF-CLRCGDSGHDLSSCE--GEYHADDLKKIQ-----------CYI 522
DC + SS C +CG+ GH +C G + + CY
Sbjct: 68 RDCSQSGGQGGQSSGAECYKCGEVGHIARNCSKGGAAYGGGFQNSGYGGGFGGPAKTCYS 127
Query: 523 CKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
C GH+ CVN S CYNCG+SGH +C ++ +G+K ICYKC + G
Sbjct: 128 CGGIGHMSRDCVNGS-------KCYNCGESGHFSRDCPK--DSGSGEK---ICYKCQQPG 175
Query: 581 HFARRCGS 588
H +C S
Sbjct: 176 HVQSQCPS 183
>gi|71416083|ref|XP_810085.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|51340810|gb|AAU01009.1| nucleic acid binding protein [Trypanosoma cruzi]
gi|70874566|gb|EAN88234.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi]
Length = 134
Score = 55.8 bits (133), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
HL+ +CP G + C CG GH C + CY C GHL C
Sbjct: 21 HLSRECPTRPPGA-MGDRACYNCGRMGHLSRECPTR-PPGAMGDRACYNCGRMGHLSREC 78
Query: 532 VNSSIIGLKQVS---CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
N G + V+ CY+C Q GHL +C N+ G+++ CY CG+ GH +R C
Sbjct: 79 PNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPG--GERA---CYNCGQTGHTSRAC 131
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK 540
D S C CG GH C + CY C GHL C +
Sbjct: 3 DNAMTRGSRACYNCGQPGHLSRECPTR-PPGAMGDRACYNCGRMGHLSRECPTRPPGAMG 61
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GHL EC N + CY C +EGH AR C
Sbjct: 62 DRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDC 107
Score = 49.3 bits (116), Expect = 0.006, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 30/144 (20%)
Query: 422 SETCSNCGKENHTAATCKMQKQ----NKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLAS 477
S C NCG+ H + C + ++ C+ CG HL+
Sbjct: 10 SRACYNCGQPGHLSRECPTRPPGAMGDRACYNCGRMG-------------------HLSR 50
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD--DLKKIQCYICKSFGHLC--CVN 533
+CP G + C CG GH C + + CY C+ GHL C N
Sbjct: 51 ECPTRPPG-AMGDRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDCPN 109
Query: 534 SSIIGLKQVSCYNCGQSGHLGPEC 557
+ G + +CYNCGQ+GH C
Sbjct: 110 APPGG--ERACYNCGQTGHTSRAC 131
Score = 42.7 bits (99), Expect = 0.57, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 18/105 (17%)
Query: 417 PPG-WNSETCSNCGKENHTAATCKMQKQ----NKPCFLCGSFKHRWKNCKQGQD------ 465
PPG C NCG+ H + C + ++ C+ CG H + C
Sbjct: 30 PPGAMGDRACYNCGRMGHLSRECPTRPPGAMGDRACYNCGRMGHLSRECPNRPAGGFRGV 89
Query: 466 ----CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C+ + HLA DCP G + C CG +GH +C
Sbjct: 90 ARGACYHCQQEGHLARDCPNAPPGGERA---CYNCGQTGHTSRAC 131
>gi|123325507|gb|ABM74410.1| vasa protein [Botrylloides violaceus]
Length = 630
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 21/120 (17%)
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIG 538
G G S C +CG+ GH C + C+ C GH+ C + G
Sbjct: 31 GNGDGGGSRSKGCFKCGEEGHMSRDCP-SGGGGGSRSKGCFKCGEEGHMSRDCPSGGGGG 89
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNL------------ICYKCGKEGHFARRC 586
+ C+ CG+ GH+ +C N G+KS+ CYKCG+EGHF+R C
Sbjct: 90 SRSKGCFKCGEEGHISRDCPN------GQKSDFSRNGAGDCARSTACYKCGEEGHFSREC 143
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 443 QNKPCFLCGSFKHRWKNCKQGQD-------CFINKGSEHLASDCPGTDQGNNLSSNFCLR 495
++K CF CG H ++C G CF H++ DCP G + S C +
Sbjct: 39 RSKGCFKCGEEGHMSRDCPSGGGGGSRSKGCFKCGEEGHMSRDCPSGGGGGSRSKG-CFK 97
Query: 496 CGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGP 555
CG+ GH C +D + G C S+ +CY CG+ GH
Sbjct: 98 CGEEGHISRDCPNGQKSDFSRN---------GAGDCARST-------ACYKCGEEGHFSR 141
Query: 556 ECANSCE 562
EC + E
Sbjct: 142 ECPKAGE 148
>gi|328869417|gb|EGG17795.1| hypothetical protein DFA_08795 [Dictyostelium fasciculatum]
Length = 521
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 489 SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCG 548
SS C +CG GH +C +Y + C+ C GH+ CY CG
Sbjct: 283 SSIVCYKCGGEGHQQIACTSKYPS---TGGVCHSCSGRGHI------QYNCPSAKCYRCG 333
Query: 549 QSGHLGPECANSCEALNGKKSNLI-CYKCGKEGHFARRCGSNFKDRLRISDLLFTAERPP 607
Q+GH C + GK N+ CY CGKEGH A+ C D+ FT ++P
Sbjct: 334 QNGHQQKYCTYG-PSEGGKPKNVFPCYACGKEGHLAKDC-----------DVCFTCKQPG 381
Query: 608 TRAR 611
+++
Sbjct: 382 HKSK 385
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 67/187 (35%), Gaps = 47/187 (25%)
Query: 447 CFLCGSFKHRWKNCKQ-----GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
C+ CG H+ C G C G H+ +CP S C RCG +GH
Sbjct: 287 CYKCGGEGHQQIACTSKYPSTGGVCHSCSGRGHIQYNCP---------SAKCYRCGQNGH 337
Query: 502 DLSSCE-GEYHADDLKKI-QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPE 556
C G K + CY C GHL C V C+ C Q GH +
Sbjct: 338 QQKYCTYGPSEGGKPKNVFPCYACGKEGHLAKDCDV-----------CFTCKQPGHKSKD 386
Query: 557 CANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGS 616
C +C+ C + GH A+ C F+ R + + P + +H G+
Sbjct: 387 CD-------------VCHTCKERGHRAKECQLCFECR----KVGHKSWECPEKKQHQYGN 429
Query: 617 NGTPHGL 623
N + G
Sbjct: 430 NNSSSGW 436
>gi|348540581|ref|XP_003457766.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Oreochromis niloticus]
Length = 137
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 70/155 (45%), Gaps = 44/155 (28%)
Query: 447 CFLCGSFKHRWKNC-----------KQGQDCFINKGSE--HLASDCPGTDQGNNLSSNFC 493
CF CG H KNC +G+D F + E H+A DC T+ + C
Sbjct: 6 CFGCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHVARDCERTE-------DVC 58
Query: 494 LRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL--CCVNSSIIGLKQVSCYNCGQSG 551
CG +GH +C HA + K CY C SFGH+ CC ++V CY CG+ G
Sbjct: 59 YNCGKAGHMARNCN---HAHEQK---CYSCGSFGHIQKCC--------EKVKCYRCGEIG 104
Query: 552 HLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ C+ K S L CY GK GH A+ C
Sbjct: 105 HVAVHCS--------KASELNCYNYGKSGHLAKEC 131
>gi|354544631|emb|CCE41356.1| hypothetical protein CPAR2_303450 [Candida parapsilosis]
Length = 180
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 77/194 (39%), Gaps = 36/194 (18%)
Query: 378 RKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRY-----FDPPGWNSETCSNCGKEN 432
R + EA +D +E YN RKP + +P S+ C +CG
Sbjct: 7 RTCYKCGEAGHVADDCTQEERLCYN------CRKPGHESGDCPEPKQATSKQCYSCGDVG 60
Query: 433 HTAATCKMQKQNKPCFLCGSFKHRWKNCKQ---GQDCFINK---GSEHLASDCPGTDQGN 486
H + C Q Q C+ CG F H K+C Q GQ K GS G+
Sbjct: 61 HIQSECPNQAQGAKCYNCGQFGHISKDCDQPPSGQAPPFRKSFGGSR---------GGGH 111
Query: 487 NLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV---S 543
+ S C +CG H C+ ++CY C GH+ S G V +
Sbjct: 112 SASGTTCYKCGGPNHFARDCQ-------AGTVKCYACGKPGHISKDCHSAAGGSNVAAKT 164
Query: 544 CYNCGQSGHLGPEC 557
CYNCG+SGH+ EC
Sbjct: 165 CYNCGKSGHISREC 178
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 57/155 (36%), Gaps = 47/155 (30%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H +C Q + C+ + H + DCP Q +S C CGD GH S
Sbjct: 9 CYKCGEAGHVADDCTQEERLCYNCRKPGHESGDCPEPKQ---ATSKQCYSCGDVGHIQSE 65
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC--ANSCEA 563
C + + CYNCGQ GH+ +C S +A
Sbjct: 66 CPNQ-----------------------------AQGAKCYNCGQFGHISKDCDQPPSGQA 96
Query: 564 LNGKKS------------NLICYKCGKEGHFARRC 586
+KS CYKCG HFAR C
Sbjct: 97 PPFRKSFGGSRGGGHSASGTTCYKCGGPNHFARDC 131
>gi|330417907|ref|NP_001193408.1| zinc finger protein 9 [Bos taurus]
gi|296470847|tpg|DAA12962.1| TPA: zinc finger protein 9-like [Bos taurus]
Length = 171
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 62/142 (43%), Gaps = 26/142 (18%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG F H K+C D N G S H+A DC + C CG GH
Sbjct: 48 CYRCGKFGHYAKDCDLLDDICYNCGKSGHIAKDCA---EPKREGERCCYTCGRPGHLARD 104
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C D ++ +CY C GH+ QV CY CG+ GH+ A+N
Sbjct: 105 C------DRQEERKCYSCGKSGHI------QKYCTQVKCYRCGEIGHV---------AIN 143
Query: 566 GKKSNLI-CYKCGKEGHFARRC 586
+K N + CY+CG+ GH R C
Sbjct: 144 CRKMNEVNCYRCGESGHLTREC 165
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 25/138 (18%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSE-HLASDC 479
C CGK H A C + + C+ CG H K+C ++G+ C G HLA DC
Sbjct: 48 CYRCGKFGHYAKDCDLL--DDICYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDC 105
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
++ C CG SGH C +++CY C GH V + +
Sbjct: 106 DRQEERK------CYSCGKSGHIQKYCT---------QVKCYRCGEIGH---VAINCRKM 147
Query: 540 KQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 148 NEVNCYRCGESGHLTREC 165
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 24/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYH---------------ADDLKKIQCYICKSFGHLCCV 532
+SS C +CG GH +C + + CY C FGH
Sbjct: 1 MSSKECFKCGRVGHWAPACSKGGGARGRGARGRGHGAQCSSTTLPVICYRCGKFGHY--- 57
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L CYNCG+SGH+ +CA ++ CY CG+ GH AR C
Sbjct: 58 -AKDCDLLDDICYNCGKSGHIAKDCAEP-----KREGERCCYTCGRPGHLARDC 105
>gi|340914996|gb|EGS18337.1| DNA-binding protein hexbp-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 165
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSEHLA 476
+ + C CG+ H A C + K C+ CG ++C +G + C+ H++
Sbjct: 6 SGQACFTCGQTTHKARDCPNKAAAK-CYNCG------RDCPEGPKDTKTCYRCGQPGHIS 58
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE-------GEYHADDLKKIQCYICKSFGHL 529
DCP T G+ S C +CG+ GH +C + CY C GHL
Sbjct: 59 RDCP-TTGGSGQSGAECYKCGEIGHIARNCNKGAPYGGFNGGYGGYGQKTCYSCGGIGHL 117
Query: 530 C--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CVN + CYNCG SGHL EC + G+K ICYKC + GH +C
Sbjct: 118 SRDCVNGN-------KCYNCGVSGHLSRECP---KESGGEK---ICYKCQQPGHVQSQC 163
>gi|343420182|emb|CCD19181.1| nucleic acid binding protein, putative [Trypanosoma vivax Y486]
Length = 416
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 20/125 (16%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF G F H + C CF H +++CP D G C RC + GHD++ C
Sbjct: 10 CFNRGHFGHSSQLCASKPVCFHCSMPGHTSTECPRKDMG-----RLCYRCKEPGHDMAKC 64
Query: 507 EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANS-CEALN 565
+ QC++C GHL + +V C C Q GH+ C S C
Sbjct: 65 P--------QSPQCHMCNQTGHL------VAQCPEVLCNRCHQKGHMASACKMSPCSTDG 110
Query: 566 GKKSN 570
G S+
Sbjct: 111 GSHSS 115
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTD 483
C +C HT+ C + + C+ C H C Q C + + HL + CP
Sbjct: 28 VCFHCSMPGHTSTECPRKDMGRLCYRCKEPGHDMAKCPQSPQCHMCNQTGHLVAQCPEV- 86
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCE 507
C RC GH S+C+
Sbjct: 87 --------LCNRCHQKGHMASACK 102
>gi|46137541|ref|XP_390462.1| hypothetical protein FG10286.1 [Gibberella zeae PH-1]
Length = 185
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 78/190 (41%), Gaps = 48/190 (25%)
Query: 416 DPPGWNSETCSNCGKENHTAATC-KMQKQNKPCFLCGSFKHRWKNCK------QGQDCFI 468
D P C NCG E H + C + K NK C+ CG H ++C Q +C+
Sbjct: 28 DCPTKGPAKCYNCGGEGHMSRDCTEPMKDNKSCYKCGQPGHISRDCPMSGGSGQATECY- 86
Query: 469 NKGSE-------HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCY 521
K S H+A +C + GNN F CY
Sbjct: 87 -KASSNCRLLIGHIARNCNKSSYGNNYGGGF------------------QQQGGAGKTCY 127
Query: 522 ICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
C FGH+ CVN G+K CYNCG+SGH +C E+ G+K ICYKC +
Sbjct: 128 SCGGFGHMSRECVN----GMK---CYNCGESGHYSRDCPK--ESAGGEK---ICYKCQQP 175
Query: 580 GHFARRCGSN 589
GH +C N
Sbjct: 176 GHVQSQCPGN 185
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 65/163 (39%), Gaps = 43/163 (26%)
Query: 447 CFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHD 502
C+ CGS H+ ++C K C+ G H++ DC P D + C +CG GH
Sbjct: 16 CYSCGSTAHQARDCPTKGPAKCYNCGGEGHMSRDCTEPMKD------NKSCYKCGQPGHI 69
Query: 503 LSSCEGEYHADDLKKIQCYICKS-----FGHL---CCVNSSIIG-----------LKQVS 543
C + +CY S GH+ C N S G +
Sbjct: 70 SRDCP--MSGGSGQATECYKASSNCRLLIGHIARNC--NKSSYGNNYGGGFQQQGGAGKT 125
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY+CG GH+ EC N + CY CG+ GH++R C
Sbjct: 126 CYSCGGFGHMSRECVN----------GMKCYNCGESGHYSRDC 158
>gi|47223220|emb|CAG11355.1| unnamed protein product [Tetraodon nigroviridis]
Length = 167
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 30/144 (20%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C Q +D C+ S H++ DC + C CG +GH
Sbjct: 44 CYRCGDQGHMVKDCDQTEDSCYNCHKSGHISRDCK---EPKREREQQCYNCGKAGHMARE 100
Query: 506 CEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCE 562
C+ HA++ K C+ C + GH LC +V CY CG GH+ +C+
Sbjct: 101 CD---HANEQK---CFTCGTLGHIQKLC---------DKVKCYRCGGIGHVALQCS---- 141
Query: 563 ALNGKKSNLICYKCGKEGHFARRC 586
K S CY CGK GH A+ C
Sbjct: 142 ----KASETTCYNCGKAGHVAKDC 161
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 58/142 (40%), Gaps = 29/142 (20%)
Query: 465 DCFINKGSEHLASDCPGTDQGNNLSSN---------FCLRCGDSGHDLSSCEGEYHADDL 515
DCF H +CP T G FC RCGD GH + C D
Sbjct: 8 DCFGCGRPGHWVKNCP-TSSGLRGRGPRGRGRGKELFCYRCGDQGHMVKDC-------DQ 59
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC--AN-----SCEALNGKK 568
+ CY C GH+ ++ CYNCG++GH+ EC AN +C L G
Sbjct: 60 TEDSCYNCHKSGHISRDCKEPKREREQQCYNCGKAGHMARECDHANEQKCFTCGTL-GHI 118
Query: 569 SNLI----CYKCGKEGHFARRC 586
L CY+CG GH A +C
Sbjct: 119 QKLCDKVKCYRCGGIGHVALQC 140
>gi|400598844|gb|EJP66551.1| zinc knuckle protein [Beauveria bassiana ARSEF 2860]
Length = 224
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 71/196 (36%), Gaps = 43/196 (21%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSSERL--CYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCE----------------GEYHADDL------- 515
CP N +S C CG GH +C G Y +
Sbjct: 66 CPTLRLTGNATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGRGGYAGGNFGRGGFAG 125
Query: 516 --KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL-- 571
+ CY C H + + + CY CG+ GH+ + C A NG N
Sbjct: 126 GPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAG 177
Query: 572 -ICYKCGKEGHFARRC 586
CY+CG+ GH +R C
Sbjct: 178 KTCYQCGEAGHISRDC 193
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 49/147 (33%), Gaps = 49/147 (33%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEG-------------EYHADDLKKI----QCYICKSFGH 528
++LS C +CG+ GH C E + L + QCY C+ GH
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGH 61
Query: 529 LCCVNSSIIGLKQVS------CYNCGQSGHLGPECANSC--------------------- 561
V + L+ CYNCGQ GHL C N
Sbjct: 62 ---VQADCPTLRLTGNATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGRGGYAGGNF 118
Query: 562 --EALNGKKSNLICYKCGKEGHFARRC 586
G CYKCG HFAR C
Sbjct: 119 GRGGFAGGPRPATCYKCGGPNHFARDC 145
>gi|71418282|ref|XP_810805.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|16225904|gb|AAL16022.1|AF420314_1 zinc finger protein PDZ5 [Trypanosoma cruzi]
gi|70875394|gb|EAN88954.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi]
Length = 134
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
HL+ +CP G + C CG GH C + CY C GHL C
Sbjct: 21 HLSRECPTRPPGV-MGDRACYNCGRMGHLSRECPTR-PPGVMGDRACYNCGRMGHLSREC 78
Query: 532 VNSSIIGLKQVS---CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
N G + V+ CY+C Q GHL +C N+ G+++ CY CG+ GH +R C
Sbjct: 79 PNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPG--GERA---CYNCGQTGHTSRAC 131
Score = 53.5 bits (127), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK 540
D S C CG GH C + CY C GHL C +
Sbjct: 3 DNAMTRGSRACYNCGQPGHLSRECPTR-PPGVMGDRACYNCGRMGHLSRECPTRPPGVMG 61
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GHL EC N + CY C +EGH AR C
Sbjct: 62 DRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDC 107
Score = 49.3 bits (116), Expect = 0.006, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 30/144 (20%)
Query: 422 SETCSNCGKENHTAATCKMQKQ----NKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLAS 477
S C NCG+ H + C + ++ C+ CG HL+
Sbjct: 10 SRACYNCGQPGHLSRECPTRPPGVMGDRACYNCGRMG-------------------HLSR 50
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD--DLKKIQCYICKSFGHLC--CVN 533
+CP G + C CG GH C + + CY C+ GHL C N
Sbjct: 51 ECPTRPPG-VMGDRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDCPN 109
Query: 534 SSIIGLKQVSCYNCGQSGHLGPEC 557
+ G + +CYNCGQ+GH C
Sbjct: 110 APPGG--ERACYNCGQTGHTSRAC 131
Score = 43.1 bits (100), Expect = 0.45, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 18/105 (17%)
Query: 417 PPG-WNSETCSNCGKENHTAATCKMQKQ----NKPCFLCGSFKHRWKNCKQGQD------ 465
PPG C NCG+ H + C + ++ C+ CG H + C
Sbjct: 30 PPGVMGDRACYNCGRMGHLSRECPTRPPGVMGDRACYNCGRMGHLSRECPNRPAGGFRGV 89
Query: 466 ----CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C+ + HLA DCP G + C CG +GH +C
Sbjct: 90 ARGACYHCQQEGHLARDCPNAPPGGERA---CYNCGQTGHTSRAC 131
>gi|449514827|ref|XP_004174665.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCHC domain-containing
protein 7 [Taeniopygia guttata]
Length = 782
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 67/182 (36%), Gaps = 53/182 (29%)
Query: 413 RYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGS 472
RY+ G S TC NC + H + C K+ PC LC G
Sbjct: 466 RYYR--GDKSVTCRNCQRPGHLSKNCPTPKKAPPCCLCA-------------------GR 504
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC---------------EGEYHADDLKK 517
+HL CP + FCL C GH C +G Y AD +
Sbjct: 505 DHLQHSCP---------ARFCLNCCLPGHCFKECLERAYWNKHCNRCDMKGHY-ADACPE 554
Query: 518 I--QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNG---KKSNLI 572
I Q ++ G + +S V CYNC + GHLG EC+ + + G S +
Sbjct: 555 IWRQYHLTTKPGPIKAADSPSERAVSVYCYNCSRKGHLGYECSE--KRMQGNMFPTSPFV 612
Query: 573 CY 574
CY
Sbjct: 613 CY 614
>gi|403416646|emb|CCM03346.1| predicted protein [Fibroporia radiculosa]
Length = 641
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 60/145 (41%), Gaps = 16/145 (11%)
Query: 424 TCSNCGKE-NHTAATCKMQKQNKPCFLCGSF-KHRWKNCKQGQDCFINKGSEHLASDCPG 481
C NCG E +H C + C CG+ +H ++C + CF H+ DCP
Sbjct: 294 VCKNCGAEGDHKTYECPVLI----CLTCGARDEHSTRSCPISKTCFNCGMKGHINKDCPN 349
Query: 482 TDQGNNLSSNF--CLRCGDSGHDLSSCEGEY----HADDLKK---IQCYICKSFGHLCCV 532
G N ++ F C RCG H C + + DD ++ +Q K L
Sbjct: 350 RHSGRNSANYFNDCDRCGARSHTSDECPTLWRLYEYVDDTERQNILQTREAKQTLALGKG 409
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPEC 557
I + CYNCG GHLG +C
Sbjct: 410 GEGYIASDEW-CYNCGGCGHLGDDC 433
>gi|345562029|gb|EGX45101.1| hypothetical protein AOL_s00173g202 [Arthrobotrys oligospora ATCC
24927]
Length = 549
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 63/162 (38%), Gaps = 35/162 (21%)
Query: 425 CSNCGKENHTAATCKMQKQNK-----PCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
C NC + H + C ++Q + P C NC Q H A DC
Sbjct: 295 CYNCKETGHVSRACPQERQARDPSDIPSIKC-------VNCDQ---------EGHRARDC 338
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
P ++ + N C CG+ GH+ CE D +QC C+ GH +
Sbjct: 339 P-EERKQRRNPNACRNCGEEGHEAKECE---KPRDASNVQCRKCEKMGHF---SKDCPDA 391
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
+++C NC Q GH EC K + C CG+EGH
Sbjct: 392 PKMTCRNCDQEGHRAAECPEP-------KKGMTCNNCGEEGH 426
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 78/208 (37%), Gaps = 36/208 (17%)
Query: 404 VLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATC----KMQKQNKPCFLCGSFKHRWKN 459
V R ++ + DP S C NC +E H A C K ++ C CG H K
Sbjct: 304 VSRACPQERQARDPSDIPSIKCVNCDQEGHRARDCPEERKQRRNPNACRNCGEEGHEAKE 363
Query: 460 CKQGQD-----CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-------- 506
C++ +D C + H + DCP + C C GH + C
Sbjct: 364 CEKPRDASNVQCRKCEKMGHFSKDCP------DAPKMTCRNCDQEGHRAAECPEPKKGMT 417
Query: 507 ------EGEYHAD--DLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
EG D + +KI C C GH+ +V C NC + GH EC
Sbjct: 418 CNNCGEEGHRRVDCTNPRKIICNNCDEEGHVGRDCPKPRDPARVKCRNCDEMGHSAKECP 477
Query: 559 NSCEALNGKKSNLICYKCGKEGHFARRC 586
S + C +CG+ GH++R C
Sbjct: 478 KP-----RDMSRIKCNECGEMGHWSRNC 500
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 59/161 (36%), Gaps = 27/161 (16%)
Query: 421 NSETCSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQ--DCFINKGSEHLA 476
N C NCG+E H A C+ + N C C H K+C C H A
Sbjct: 347 NPNACRNCGEEGHEAKECEKPRDASNVQCRKCEKMGHFSKDCPDAPKMTCRNCDQEGHRA 406
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHD-----------LSSCEGEYHAD-------DLKKI 518
++CP +G C CG+ GH ++C+ E H D ++
Sbjct: 407 AECPEPKKGMT-----CNNCGEEGHRRVDCTNPRKIICNNCDEEGHVGRDCPKPRDPARV 461
Query: 519 QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
+C C GH + ++ C CG+ GH C N
Sbjct: 462 KCRNCDEMGHSAKECPKPRDMSRIKCNECGEMGHWSRNCTN 502
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 29/126 (23%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H A++CP + C CG GH S C +C IC + GH +
Sbjct: 64 HFAAECP---------NQKCSCCGQKGHSASKC---------PTPKCNICNTEGH---IP 102
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
+C +CG++GH+ EC ++N C C + GH A C + K +
Sbjct: 103 FECPQKDNQACRHCGETGHMVKECP--------IRANEPCRNCQQLGHRAAECTNQRKMQ 154
Query: 594 LRISDL 599
+DL
Sbjct: 155 FGGADL 160
>gi|390601378|gb|EIN10772.1| hypothetical protein PUNSTDRAFT_18872, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 128
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH--LCCVNSSIIGLKQVSCYNCGQS 550
C +CG+ GH +C E CY C+ GH C + + KQ CY+CG
Sbjct: 5 CFKCGNLGHIAENCSSEQRL-------CYNCRQAGHESSACPSPRTVSAKQ--CYSCGGV 55
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH+ EC +L + CY CG+ GH AR C
Sbjct: 56 GHIQAECP----SLRVQGGTQKCYNCGRFGHIARVC 87
Score = 47.8 bits (112), Expect = 0.017, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 54/142 (38%), Gaps = 18/142 (12%)
Query: 445 KPCFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
K CF CG+ H +NC Q C+ + + H +S CP +S+ C CG GH
Sbjct: 3 KGCFKCGNLGHIAENCSSEQRLCYNCRQAGHESSACPSP---RTVSAKQCYSCGGVGHIQ 59
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
+ C +K CY C FGH+ V C G A
Sbjct: 60 AECPSLRVQGGTQK--CYNCGRFGHIARV-----------CPGGAGGGGFASRIAPPGRG 106
Query: 564 LNGKK-SNLICYKCGKEGHFAR 584
LN + CY+CG H AR
Sbjct: 107 LNTSTLPPVKCYRCGGPNHMAR 128
>gi|168060692|ref|XP_001782328.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666187|gb|EDQ52848.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 188
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 28/129 (21%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K G+ CF+ K +H+A CP + ++ + CL C GH L +C E+ + D+K
Sbjct: 26 KPGEGCFLCKSKDHIAKHCPTKSEKDHRKNYMCLGCRMWGHTLKNCPSEFKSADVK---- 81
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
CYNCGQ GH +C N + +G + C+ C + G
Sbjct: 82 ----------------------LCYNCGQPGHSLDKCPNPLK--DGGSAFAECFLCKQRG 117
Query: 581 HFARRCGSN 589
H ++ C N
Sbjct: 118 HLSKNCPDN 126
>gi|259149113|emb|CAY82355.1| Gis2p [Saccharomyces cerevisiae EC1118]
gi|365763461|gb|EHN04989.1| Gis2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 153
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 15/137 (10%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NC K H C M + + K C+ CG H C Q CF + H++ +CP
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFKQCYNCGEIGHVRSECTV-QRCFNCNQTGHISRECPEP 83
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK 540
+ + S C +CG H C E D + ++CY C GH+ C N +
Sbjct: 84 KKTSRFSKVSCYKCGGPNHMAKDCMKE---DGISGLKCYTCGQAGHMSRDCQNDRL---- 136
Query: 541 QVSCYNCGQSGHLGPEC 557
CYNC ++GH+ +C
Sbjct: 137 ---CYNCNETGHISKDC 150
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 24/115 (20%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGE---YHADDLKKI-------------QCYICKSFGHLCC 531
+S C CG GH C+ E Y+ + + QCY C GH
Sbjct: 1 MSQKACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGEIGH--- 57
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
V S + C+NC Q+GH+ EC + S + CYKCG H A+ C
Sbjct: 58 VRSECTVQR---CFNCNQTGHISRECPEP--KKTSRFSKVSCYKCGGPNHMAKDC 107
>gi|331238075|ref|XP_003331693.1| hypothetical protein PGTG_12858 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310683|gb|EFP87274.1| hypothetical protein PGTG_12858 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 169
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQ-DCFINKGSEHLA 476
P + +C NCG E H + C K C+ CG H ++C Q + +CF H +
Sbjct: 19 PKSGTPSCYNCGGEGHISKDCSNPTAPKSCYTCGDSGHISRDCSQQKTNCFKCGEEGHYS 78
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DCP G GD G+ S CY C GHL +
Sbjct: 79 RDCPQAGGG-----------GDQGYQSYSGGRGRGGGGGGSRNCYTCGGVGHL---SRDC 124
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+G ++ C+NCG+ GH+ +C+ +A N CY CG+ GH ++ C
Sbjct: 125 VGDQK--CFNCGEVGHVSRDCSRP-QAKN-------CYACGQSGHISKDC 164
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 20/82 (24%)
Query: 520 CYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN-----SCEA----------L 564
CY C GHL ++ SCYNCG GH+ +C+N SC
Sbjct: 5 CYNCGGGGHL---AAACPKSGTPSCYNCGGEGHISKDCSNPTAPKSCYTCGDSGHISRDC 61
Query: 565 NGKKSNLICYKCGKEGHFARRC 586
+ +K+N C+KCG+EGH++R C
Sbjct: 62 SQQKTN--CFKCGEEGHYSRDC 81
>gi|449282915|gb|EMC89650.1| Zinc finger CCHC domain-containing protein 7, partial [Columba
livia]
Length = 450
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 58/156 (37%), Gaps = 29/156 (18%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHR---WKNCKQGQDCFINKGSEHLASDCPG 481
C NCG+ H + C K+ PC LCG H W C G C+ + L C
Sbjct: 249 CRNCGRAGHLSKNCPAPKKVPPCCLCGGRGHLQSGWPFCLPGH-CY----RQCLERAC-- 301
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
S C RC GH +C + Q ++ G + +
Sbjct: 302 -------WSKLCHRCHMKGHYADACPEIWR-------QYHLTTKPGPIKVAGAHTERSAS 347
Query: 542 VSCYNCGQSGHLGPECANSCEALNG---KKSNLICY 574
V CYNC Q GH G EC+ ++G S ICY
Sbjct: 348 VYCYNCSQEGHFGYECSE--RRMHGSMFPASPFICY 381
>gi|281200716|gb|EFA74934.1| hypothetical protein PPL_11968 [Polysphondylium pallidum PN500]
Length = 254
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 14/150 (9%)
Query: 447 CFLCGSFKHRWKNCKQG-------QDCFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGD 498
CF CG H + C QG +CF H++ +CP G N S C CG+
Sbjct: 39 CFKCGKPGHMSRECTQGGGSDRGGNNCFNCGKPGHISRECPDGAAGAGNTGS--CYNCGN 96
Query: 499 SGHDLSSCEGEYHADDLKKI--QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPE 556
+GH C + +D C+ C GH+ G C+ CG++GH+ +
Sbjct: 97 TGHISRECPNKSERNDRSGGDRACFNCGKTGHM--SRDCTQGGSSAGCFKCGKTGHISRD 154
Query: 557 CANSCEALNGKKSNLICYKCGKEGHFARRC 586
C S + G + C+KC + GH +R C
Sbjct: 155 CTESGGSDRGHGGDKKCFKCNQTGHISRDC 184
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 67/157 (42%), Gaps = 32/157 (20%)
Query: 425 CSNCGKENHTAATC----KMQKQNKPCFLCGSFKHRWKNC--------KQGQD--CFINK 470
C NCGK H + C C+ CG+ H + C + G D CF
Sbjct: 65 CFNCGKPGHISRECPDGAAGAGNTGSCYNCGNTGHISRECPNKSERNDRSGGDRACFNCG 124
Query: 471 GSEHLASDCPGTDQGNNLSSNFCLRCGDSGH---DLSSCEGE--YHADDLKKIQCYICKS 525
+ H++ DC QG SS C +CG +GH D + G H D K C+ C
Sbjct: 125 KTGHMSRDC---TQGG--SSAGCFKCGKTGHISRDCTESGGSDRGHGGDKK---CFKCNQ 176
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
GH+ C NS G SC+NCG+SGH EC S
Sbjct: 177 TGHISRDCPNSDSQG---PSCFNCGESGHKSRECTKS 210
>gi|147835847|emb|CAN70803.1| hypothetical protein VITISV_044067 [Vitis vinifera]
Length = 1850
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 73/193 (37%), Gaps = 54/193 (27%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----------KQGQDCFINKGSEH 474
C NC + HTA+ C C CG H ++C + +C+ +G H
Sbjct: 1621 CWNCQEPGHTASNCP---NEGICHTCGKTGHLARDCSAPPVPPGDLRLCNNCY-KQG--H 1674
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CV 532
+A+DC NN C +GH C + C +C GH+ C
Sbjct: 1675 IAADCTNDKACNN--------CRKTGHLARDCRND--------PVCNLCNVSGHVARQCP 1718
Query: 533 NSSIIG----------LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
++++G + + C NC Q GH+ +CA +IC CG GH
Sbjct: 1719 KANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCAAPL---------MICRNCGGRGHM 1769
Query: 583 ARRCGSN-FKDRL 594
A C S F DR
Sbjct: 1770 AFECPSGRFMDRF 1782
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 27/124 (21%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H+AS+C + + C C + GH S+C E C+ C GHL C
Sbjct: 1610 HIASECT--------TRSLCWNCQEPGHTASNCPNEG--------ICHTCGKTGHLARDC 1653
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKS---------NLICYKCGKEGHF 582
+ C NC + GH+ +C N N +K+ + +C C GH
Sbjct: 1654 SAPPVPPGDLRLCNNCYKQGHIAADCTNDKACNNCRKTGHLARDCRNDPVCNLCNVSGHV 1713
Query: 583 ARRC 586
AR+C
Sbjct: 1714 ARQC 1717
>gi|91179150|gb|ABE27759.1| vasa [Azumapecten farreri]
Length = 801
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Query: 474 HLASDCPGTDQGNNLSSNF-CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL--- 529
H A +CP G C +CG+ GH C + C+ C GH+
Sbjct: 178 HFARECPTGGGGRGGGGGGKCHKCGEEGHFARECPTGGGGGGGDR-SCFKCGEQGHMSRE 236
Query: 530 CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C G SC+ CG+ GH+ EC +S G + C+KCG++GHF+R C
Sbjct: 237 CPKGGGGGGGGDRSCFKCGEQGHMSRECPSS-GGGGGGGGDRGCFKCGEQGHFSREC 292
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C+ CG+ GH EC G C+KCG+EGHFAR C
Sbjct: 170 CHKCGEDGHFARECPTG-GGGRGGGGGGKCHKCGEEGHFAREC 211
>gi|393245308|gb|EJD52819.1| hypothetical protein AURDEDRAFT_181338 [Auricularia delicata
TFB-10046 SS5]
Length = 256
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 49/130 (37%), Gaps = 35/130 (26%)
Query: 466 CFINKGSEHLASDCPGTDQGNNL--------SSNFCLRCGDSGHDLSSCEGEYHADDLKK 517
CF +G H A DCP D +NL + C RCG + H L C + DD
Sbjct: 82 CFACRGKGHAAKDCP--DANSNLEGEEKPKPAMGICYRCGATNHSLKRCRRPENPDDP-- 137
Query: 518 IQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
L +C+ CG+ GHL CA + + + C CG
Sbjct: 138 ---------------------LPFATCFVCGRKGHLAGGCAKNARGVYPDGGS--CVLCG 174
Query: 578 KEGHFARRCG 587
K H AR CG
Sbjct: 175 KTTHLARDCG 184
>gi|296178353|dbj|BAJ07808.1| putative vasa protein [Oxycomanthus japonicus]
Length = 851
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGL 539
T++G+ + C +CG+ GH C C+ C GH C + G
Sbjct: 184 TNKGSRVGGRSCYKCGEDGHISRDCPSAGGGGGGGGRGCHKCGEEGHFARECPSGGGGGG 243
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+ +C+ CG+ GH EC + G C KCG+EGHFAR C S
Sbjct: 244 GR-ACHKCGEEGHFARECPSG--GGGGGGGGRACRKCGEEGHFARECPS 289
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 50/127 (39%), Gaps = 9/127 (7%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
G+ C+ H++ DCP G C +CG+ GH C + C+
Sbjct: 192 GRSCYKCGEDGHISRDCPSAGGGGGGGGRGCHKCGEEGHFARECPSGGGGGGGRA--CHK 249
Query: 523 CKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
C GH C G +C CG+ GH A C + G C+KCGK+
Sbjct: 250 CGEEGHFARECPSGGGGGGGGGRACRKCGEEGHF----ARECPSGGGGGGGRGCFKCGKD 305
Query: 580 GHFARRC 586
GH AR C
Sbjct: 306 GHQARDC 312
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 57/167 (34%), Gaps = 28/167 (16%)
Query: 445 KPCFLCGSFKHRWKNCKQGQD--------CFINKGSEHLASDCPGTDQGNNLSSNFCLRC 496
+ C+ CG H ++C C H A +CP G + C +C
Sbjct: 193 RSCYKCGEDGHISRDCPSAGGGGGGGGRGCHKCGEEGHFARECPSGGGGGGGRA--CHKC 250
Query: 497 GDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLG 554
G+ GH C C C GH C S G C+ CG+ GH
Sbjct: 251 GEEGHFARECPSGGGGGGGGGRACRKCGEEGHFAREC-PSGGGGGGGRGCFKCGKDGHQA 309
Query: 555 PECANSCEALNGK---------------KSNLICYKCGKEGHFARRC 586
+C + KS+ C KCG+EGHFAR C
Sbjct: 310 RDCTEEGSSGGRSGGFRGGFGNSSGGDGKSDTACRKCGEEGHFAREC 356
>gi|294948106|ref|XP_002785619.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239899598|gb|EER17415.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 141
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 15/129 (11%)
Query: 466 CFINKGSEHLASDCP--GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYIC 523
CFI H A DCP + + C CG H C E + C+ C
Sbjct: 18 CFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDCPNE----QTNQRPCFKC 73
Query: 524 KSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN------SCEALNGKKSNLICYKCG 577
GH +C+ CGQ+GHL +C N S A G+ C+KCG
Sbjct: 74 GKVGHF---ARDCTEPDTRACFRCGQTGHLARDCPNEDTRPESERAPRGRSEGRNCFKCG 130
Query: 578 KEGHFARRC 586
K GH AR C
Sbjct: 131 KPGHLARDC 139
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQN-KPCFLCGSFKHRWKNCKQG--QDCFINKGSE 473
P G C NCGK +H A C ++ N +PCF CG H ++C + + CF +
Sbjct: 39 PTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGKVGHFARDCTEPDTRACFRCGQTG 98
Query: 474 HLASDCPGTD---------QGNNLSSNFCLRCGDSGHDLSSC 506
HLA DCP D +G + N C +CG GH C
Sbjct: 99 HLARDCPNEDTRPESERAPRGRSEGRN-CFKCGKPGHLARDC 139
>gi|50422497|ref|XP_459816.1| DEHA2E11682p [Debaryomyces hansenii CBS767]
gi|49655484|emb|CAG88055.1| DEHA2E11682p [Debaryomyces hansenii CBS767]
Length = 172
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 44/173 (25%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H NC+Q Q C+ + H ++DCP Q C CGD GH S
Sbjct: 9 CYKCGEAGHLADNCQQEQRLCYNCRQPGHESNDCPAPKQATQKQ---CYSCGDLGHVQSD 65
Query: 506 CEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQ---------------------- 541
C + + +CY C FGH+ C + K+
Sbjct: 66 CPTQ-----SQGAKCYNCGQFGHISKNCTEAGNESAKKPASSKLQKPATTCYKCGGPNHY 120
Query: 542 --------VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
V CY CG++GH+ +C NS A G+ ++ CY CGK GH ++ C
Sbjct: 121 ARDCQAGVVKCYACGKTGHISKDC-NS--ASGGEFTSKTCYNCGKSGHISKEC 170
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 75/188 (39%), Gaps = 32/188 (17%)
Query: 378 RKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRY--FDPPGWNSET---CSNCGKEN 432
R + EA ++ ++E YN R+P + D P T C +CG
Sbjct: 7 RSCYKCGEAGHLADNCQQEQRLCYNC------RQPGHESNDCPAPKQATQKQCYSCGDLG 60
Query: 433 HTAATCKMQKQNKPCFLCGSFKHRWKNCKQ-GQDCFINKGSEHLASDCPGTDQGNNLSSN 491
H + C Q Q C+ CG F H KNC + G + S L P T
Sbjct: 61 HVQSDCPTQSQGAKCYNCGQFGHISKNCTEAGNESAKKPASSKLQK--PATT-------- 110
Query: 492 FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQ 549
C +CG H C+ ++CY C GH+ C ++S +CYNCG+
Sbjct: 111 -CYKCGGPNHYARDCQAGV-------VKCYACGKTGHISKDCNSASGGEFTSKTCYNCGK 162
Query: 550 SGHLGPEC 557
SGH+ EC
Sbjct: 163 SGHISKEC 170
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 425 CSNCGKENHTAATC--------------KMQKQNKPCFLCGSFKHRWKNCKQGQ-DCFIN 469
C NCG+ H + C K+QK C+ CG H ++C+ G C+
Sbjct: 75 CYNCGQFGHISKNCTEAGNESAKKPASSKLQKPATTCYKCGGPNHYARDCQAGVVKCYAC 134
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE 507
+ H++ DC + G +S C CG SGH C+
Sbjct: 135 GKTGHISKDC-NSASGGEFTSKTCYNCGKSGHISKECD 171
>gi|2895760|gb|AAC32813.1| universal minicircle sequence binding protein [Crithidia
fasciculata]
gi|2895761|gb|AAC32814.1| universal minicircle sequence binding protein [Crithidia
fasciculata]
Length = 116
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ +CP +S C CG +GH C E K CY C S
Sbjct: 7 CYKCGEAGHMSRECP-----KAAASRTCYNCGQTGHLSRECPSE-----RKPKACYNCGS 56
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G +CYNCGQSGHL +C + ++ CY CG H +
Sbjct: 57 TEHLSRECPNEAKTGADSRTCYNCGQSGHLSRDCPS-------ERKPKACYNCGSTEHLS 109
Query: 584 RRC 586
R C
Sbjct: 110 REC 112
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +CG++GH C CY C GHL K +CYNCG + H
Sbjct: 7 CYKCGEAGHMSREC-----PKAAASRTCYNCGQTGHL--SRECPSERKPKACYNCGSTEH 59
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
L EC N EA G S CY CG+ GH +R C S K +
Sbjct: 60 LSRECPN--EAKTGADSR-TCYNCGQSGHLSRDCPSERKPK 97
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASDCP 480
TC CG+ H + C ++ C+ CG H + C ++ + C+ +EHL+ +CP
Sbjct: 6 TCYKCGEAGHMSRECPKAAASRTCYNCGQTGHLSRECPSERKPKACYNCGSTEHLSRECP 65
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
+ S C CG SGH C E K CY C S HL
Sbjct: 66 -NEAKTGADSRTCYNCGQSGHLSRDCPSE-----RKPKACYNCGSTEHL 108
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
V+CY CG++GH+ EC + ++ CY CG+ GH +R C S K +
Sbjct: 5 VTCYKCGEAGHMSRECPKA-------AASRTCYNCGQTGHLSRECPSERKPK 49
>gi|148668646|gb|EDL00965.1| zinc finger, CCHC domain containing 9, isoform CRA_a [Mus musculus]
Length = 271
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 19/159 (11%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H++S C +
Sbjct: 125 KNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
+C++C GHL C N+ + SC CG GH +C N +I
Sbjct: 185 KCFVCGEMGHLSRSCPDNTKGVYADGGSCKLCGSVGHFKKDCRE-----NQNSDRIITV- 238
Query: 576 CGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFV 614
G +A+ ++++D L + L ++P T+ V
Sbjct: 239 ----GRWAKGMSADYEDVLDVPKL----QKPKTKVPKVV 269
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C + H A C +++ C+ CGS +H C+ D
Sbjct: 126 NAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG GH C ++D + +
Sbjct: 186 CFVCGEMGHLSRSCPDNTKGVYADGGSCKLCGSVGHFKKDCRENQNSDRIITV 238
>gi|433935|emb|CAA53777.1| UMS binding protein [Crithidia fasciculata]
Length = 116
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ +CP +S C CG +GH C E K CY C S
Sbjct: 7 CYKCGEAGHMSRECP-----KAAASRTCYNCGQTGHLSRECPSE-----RKPKACYNCGS 56
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G +CYNCGQ+GHL EC + ++ CY CG H +
Sbjct: 57 TEHLSRECPNEAKTGADSRTCYNCGQTGHLSRECPS-------ERKPKRCYNCGSTEHLS 109
Query: 584 RRC 586
R C
Sbjct: 110 REC 112
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +CG++GH C CY C GHL K +CYNCG + H
Sbjct: 7 CYKCGEAGHMSREC-----PKAAASRTCYNCGQTGHL--SRECPSERKPKACYNCGSTEH 59
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
L EC N EA G S CY CG+ GH +R C S K +
Sbjct: 60 LSRECPN--EAKTGADSR-TCYNCGQTGHLSRECPSERKPK 97
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASDCP 480
TC CG+ H + C ++ C+ CG H + C ++ + C+ +EHL+ +CP
Sbjct: 6 TCYKCGEAGHMSRECPKAAASRTCYNCGQTGHLSRECPSERKPKACYNCGSTEHLSRECP 65
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
+ S C CG +GH C E K +CY C S HL
Sbjct: 66 -NEAKTGADSRTCYNCGQTGHLSRECPSE-----RKPKRCYNCGSTEHL 108
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
V+CY CG++GH+ EC + ++ CY CG+ GH +R C S K +
Sbjct: 5 VTCYKCGEAGHMSRECPKA-------AASRTCYNCGQTGHLSRECPSERKPK 49
>gi|448531555|ref|XP_003870274.1| Gis2 transcription factor [Candida orthopsilosis Co 90-125]
gi|380354628|emb|CCG24144.1| Gis2 transcription factor [Candida orthopsilosis]
Length = 177
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 72/188 (38%), Gaps = 27/188 (14%)
Query: 378 RKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRY-----FDPPGWNSETCSNCGKEN 432
R + EA +D +E YN RKP + +P S+ C +CG
Sbjct: 7 RTCYKCGEAGHVADDCTQEERLCYN------CRKPGHESGDCPEPKQTTSKQCYSCGDVG 60
Query: 433 HTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNF 492
H C Q Q C+ CG F H KNC Q + S P +G + S
Sbjct: 61 HIQTECPNQAQGAKCYNCGQFGHISKNCDQAP---TGQAPPFKKSYGP---RGGSASGTT 114
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQ 549
C +CG H C+ +CY C GH+ C + +CYNCG+
Sbjct: 115 CYKCGGPNHFARDCQ-------AGNTKCYACGKPGHISKDCHSAAGGSNAGSKTCYNCGK 167
Query: 550 SGHLGPEC 557
SGH+ EC
Sbjct: 168 SGHISREC 175
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 56/152 (36%), Gaps = 44/152 (28%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H +C Q + C+ + H + DCP Q +S C CGD GH +
Sbjct: 9 CYKCGEAGHVADDCTQEERLCYNCRKPGHESGDCPEPKQ---TTSKQCYSCGDVGHIQTE 65
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC--ANSCEA 563
C + + CYNCGQ GH+ C A + +A
Sbjct: 66 CPNQ-----------------------------AQGAKCYNCGQFGHISKNCDQAPTGQA 96
Query: 564 L---------NGKKSNLICYKCGKEGHFARRC 586
G S CYKCG HFAR C
Sbjct: 97 PPFKKSYGPRGGSASGTTCYKCGGPNHFARDC 128
>gi|110759374|ref|XP_001119951.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|328780974|ref|XP_003249895.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|328780976|ref|XP_003249896.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|328780978|ref|XP_003249897.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|380028029|ref|XP_003697714.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028031|ref|XP_003697715.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028033|ref|XP_003697716.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028035|ref|XP_003697717.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028037|ref|XP_003697718.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
Length = 155
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ C F H + CK+ QD C+ +G H+A DC QG +S C C +GH S
Sbjct: 46 CYKCNQFGHFARECKEDQDLCYRCQGVGHIAKDC---QQGPEMS---CYNCNKTGHMARS 99
Query: 506 C-EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
C EG + CY C GH N + +G K +CY CG++GHL EC
Sbjct: 100 CPEGGNDSGRFGMQSCYNCNKTGHFA-RNCTEVGGK--ACYTCGKTGHLSREC 149
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +C GH C+ + DL CY C+ GH + ++SCYNC ++GH
Sbjct: 46 CYKCNQFGHFARECKED---QDL----CYRCQGVGH---IAKDCQQGPEMSCYNCNKTGH 95
Query: 553 LGPECANSCEALN--GKKSNLICYKCGKEGHFARRC 586
+ C E N G+ CY C K GHFAR C
Sbjct: 96 MARSCP---EGGNDSGRFGMQSCYNCNKTGHFARNC 128
>gi|340507460|gb|EGR33421.1| universal minicircle sequence binding protein, putative
[Ichthyophthirius multifiliis]
Length = 724
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 77/191 (40%), Gaps = 46/191 (24%)
Query: 425 CSNCGKENHTAATCK----MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
C CG+E H + C +K+N CF CG H++ +CP
Sbjct: 305 CFKCGEEGHMSRDCSNGNSREKKNNSCFNCGEIT-------------------HMSKECP 345
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEG--EYHADDLKKIQCYICKSFGHLC--CVNSSI 536
+ ++ C +C GH C +Y A +K C++CK GH C +
Sbjct: 346 NPKKPRSIQ---CYKCQQEGHMAKDCPNAQQYQARVMK---CFLCKKEGHKSNDCTEPPL 399
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR- 595
C C + GH +C N + +N + +C+ CG EGH + C N ++ R
Sbjct: 400 -------CMKCKEQGHQSKDCQNP-DHMNKR----VCFNCGDEGHPTKGCPQNQQNSFRN 447
Query: 596 ISDLLFTAERP 606
+D T ++P
Sbjct: 448 NNDTNSTYQKP 458
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 43/199 (21%)
Query: 410 RKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKP----CFLCGSFKHRWKNCKQGQD 465
+KPR S C C +E H A C +Q + CFLC H+ +C +
Sbjct: 348 KKPR--------SIQCYKCQQEGHMAKDCPNAQQYQARVMKCFLCKKEGHKSNDCTEPPL 399
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC----EGEYHADD------- 514
C K H + DC D ++ C CGD GH C + + ++
Sbjct: 400 CMKCKEQGHQSKDCQNPDH---MNKRVCFNCGDEGHPTKGCPQNQQNSFRNNNDTNSTYQ 456
Query: 515 -------LKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGK 567
+K +C+ C+ GH +I + C+ C Q+ H EC N K
Sbjct: 457 KPGGFQQREKPKCFKCQKEGHR-----AIDCTELPYCFKCLQNIHSSKECD---HPENSK 508
Query: 568 KSNLICYKCGKEGHFARRC 586
K +C+ CG E H ++ C
Sbjct: 509 K--RVCFNCGDEKHCSKDC 525
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 516 KKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLIC 573
+K C+ C GH+ C N + K SC+NCG+ H+ EC N K ++ C
Sbjct: 301 RKKGCFKCGEEGHMSRDCSNGNSREKKNNSCFNCGEITHMSKECPNP-----KKPRSIQC 355
Query: 574 YKCGKEGHFARRC 586
YKC +EGH A+ C
Sbjct: 356 YKCQQEGHMAKDC 368
>gi|319921907|gb|ADV78572.1| universal minicircle sequence-binding protein 2 [Leishmania
donovani]
Length = 175
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ CP ++ C CG++GH C E K CY C S
Sbjct: 66 CYKCGEAGHMSRSCP-----RAAATRSCYNCGETGHMSRDCPSE-----RKPKSCYNCGS 115
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G SCYNCG +GHL +C N ++ CY CG H +
Sbjct: 116 TDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPN-------ERKPKSCYNCGSTDHLS 168
Query: 584 RRC 586
R C
Sbjct: 169 REC 171
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNC 547
+S+ C +CG++GH SC CY C GH+ K SCYNC
Sbjct: 61 MSAITCYKCGEAGHMSRSCP-----RAAATRSCYNCGETGHM--SRDCPSERKPKSCYNC 113
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + HL EC N +A +S CY CG GH +R C
Sbjct: 114 GSTDHLSRECTNEAKAGADTRS---CYNCGGTGHLSRDC 149
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQD---CFINKGSEH 474
+ +C NCG+ H + C +++ K C+ CGS H + C K G D C+ G+ H
Sbjct: 85 TRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNCGGTGH 144
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGH 501
L+ DCP N C CG + H
Sbjct: 145 LSRDCP-----NERKPKSCYNCGSTDH 166
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 53/138 (38%), Gaps = 31/138 (22%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTD 483
TC CG+ H + +C + C+ CG + H++ DCP
Sbjct: 65 TCYKCGEAGHMSRSCPRAAATRSCYNCGE-------------------TGHMSRDCPSER 105
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQ 541
+ + C CG + H C E A + CY C GHL C N K
Sbjct: 106 KPKS-----CYNCGSTDHLSRECTNEAKAGADTR-SCYNCGGTGHLSRDCPNER----KP 155
Query: 542 VSCYNCGQSGHLGPECAN 559
SCYNCG + HL EC +
Sbjct: 156 KSCYNCGSTDHLSRECPD 173
>gi|441674301|ref|XP_004092503.1| PREDICTED: zinc finger CCHC domain-containing protein 13 [Nomascus
leucogenys]
Length = 170
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 63/145 (43%), Gaps = 28/145 (19%)
Query: 447 CFLCGSFKHRWKNCKQ-GQDCFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG KNC G C+ S H+A DC P ++ + C CG GH
Sbjct: 47 CYCCGESGRHAKNCVLLGNICYNCGRSGHIAKDCKEPKRERHQH-----CYNCGRLGHLA 101
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C D K+ +CY C GH+ QV CY CG+ GH+ C+
Sbjct: 102 RDC------DRQKEQKCYSCGKLGHI------QKDCAQVKCYRCGEIGHVSINCS----- 144
Query: 564 LNGKKSNLICYKCGKEGHFARRCGS 588
K S + CY+CGK GH A+ C S
Sbjct: 145 ---KASEVTCYRCGKSGHLAKECPS 166
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 59/141 (41%), Gaps = 25/141 (17%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ-----GQDCFINKGSEHLA 476
S TC CG+ A C + C+ CG H K+CK+ Q C+ HLA
Sbjct: 44 SYTCYCCGESGRHAKNCVLL--GNICYNCGRSGHIAKDCKEPKRERHQHCYNCGRLGHLA 101
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DC + C CG GH D +++CY C GH V+ +
Sbjct: 102 RDC------DRQKEQKCYSCGKLGHI---------QKDCAQVKCYRCGEIGH---VSINC 143
Query: 537 IGLKQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 144 SKASEVTCYRCGKSGHLAKEC 164
>gi|242807741|ref|XP_002485018.1| zinc knuckle domain protein (Byr3), putative [Talaromyces
stipitatus ATCC 10500]
gi|218715643|gb|EED15065.1| zinc knuckle domain protein (Byr3), putative [Talaromyces
stipitatus ATCC 10500]
Length = 181
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 25/177 (14%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG + H + C + K C+ CG H ++C+Q N G +
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTQAPKEKSCYRCGQTGHISRDCQQSGP--ANNGGNYR 79
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE------GEYHADDLKKIQCYICKSFGHL 529
C +CG GH +C G + ++ CY C +GH+
Sbjct: 80 GGF------SGGSGGQECYKCGQVGHIARNCSQGGGYGGGHGGFGGRQQTCYSCGGYGHM 133
Query: 530 CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G K CYNCG+ GH+ +C NG++ +CYKC + GH C
Sbjct: 134 --ARDCTQGQK---CYNCGEVGHVSRDCTTE---GNGER---VCYKCKQPGHVQSAC 179
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 39/169 (23%)
Query: 441 QKQNKPCFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGD 498
Q ++ CF CG H+ ++C K C+ G H++ +C + C RCG
Sbjct: 4 QTGSRGCFNCGEPSHQARDCPKKGTPTCYNCGGQGHVSRECTQAPK-----EKSCYRCGQ 58
Query: 499 SGHDLSSCE--------GEYHADDLKKI---QCYICKSFGHLCCVNSS----------II 537
+GH C+ G Y +CY C GH+ N S
Sbjct: 59 TGHISRDCQQSGPANNGGNYRGGFSGGSGGQECYKCGQVGHI-ARNCSQGGGYGGGHGGF 117
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G +Q +CY+CG GH+ +C G+K CY CG+ GH +R C
Sbjct: 118 GGRQQTCYSCGGYGHMARDC------TQGQK----CYNCGEVGHVSRDC 156
>gi|241911781|gb|ACS71750.1| RGD1 toxin protein [Lethenteron camtschaticum]
Length = 140
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 48/116 (41%), Gaps = 17/116 (14%)
Query: 488 LSSNFCLRCGDSGHDLSSCE-----------GEYHADDLKKIQCYICKSFGHL---CCVN 533
+SSN C RCG SGH C + CY C GH+ C +
Sbjct: 1 MSSNECFRCGGSGHWARECPNGAGGGRGPGGPVGRGGRGRGDGCYRCGEGGHIARECPLP 60
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
+ +CYNCG+ GH+ EC E + CY CGK+GH AR C S
Sbjct: 61 QDSVSSNTAACYNCGKGGHIARECP---EGRQDRGGGPSCYTCGKQGHLARECSSG 113
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 53/135 (39%), Gaps = 17/135 (12%)
Query: 465 DCFINKGSEHLASDCP-----------GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD 513
+CF GS H A +CP +G + C RCG+ GH C +
Sbjct: 5 ECFRCGGSGHWARECPNGAGGGRGPGGPVGRGGRGRGDGCYRCGEGGHIARECPLPQDSV 64
Query: 514 DLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL 571
CY C GH+ C SCY CG+ GHL EC++ G +
Sbjct: 65 SSNTAACYNCGKGGHIARECPEGRQDRGGGPSCYTCGKQGHLARECSSG----GGGPGDN 120
Query: 572 ICYKCGKEGHFARRC 586
CY CG+ GH R C
Sbjct: 121 KCYGCGQRGHMQRDC 135
>gi|149036677|gb|EDL91295.1| cellular nucleic acid binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 139
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 23/113 (20%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H+A DC + C CG GH C+ HAD+ K CY C FGH+
Sbjct: 44 HIAKDC---KEPKREREQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI---- 90
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+V CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 91 --QKDCTKVKCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNK--------PCFLCGSFKHRWKNCKQG----QDCFI 468
+S C CG+ H A C C+ CG H K+CK+ + C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRACYNCGRGGHIAKDCKEPKREREQCCY 61
Query: 469 NKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFG 527
N G HLA DC D+ C CG+ GH D K++CY C G
Sbjct: 62 NCGKPGHLARDCDHADE------QKCYSCGEFGHI---------QKDCTKVKCYRCGETG 106
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
H+ +N S +V+CY CG+SGHL EC
Sbjct: 107 HVA-INCSKT--SEVNCYRCGESGHLAREC 133
>gi|148666813|gb|EDK99229.1| cellular nucleic acid binding protein, isoform CRA_b [Mus musculus]
Length = 140
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 23/113 (20%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H+A DC + C CG GH C+ HAD+ K CY C FGH+
Sbjct: 45 HIAKDC---KEPKREREQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI---- 91
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+V CY CG++GH+ C+ K S + CY+CG+ GH AR C
Sbjct: 92 --QKDCTKVKCYRCGETGHVAINCS--------KTSEVNCYRCGESGHLAREC 134
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 63/151 (41%), Gaps = 32/151 (21%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNK---------PCFLCGSFKHRWKNCKQG----QDCF 467
+S C CG+ H A C C+ CG H K+CK+ + C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGACYNCGRGGHIAKDCKEPKREREQCC 61
Query: 468 INKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSF 526
N G HLA DC D+ C CG+ GH D K++CY C
Sbjct: 62 YNCGKPGHLARDCDHADE------QKCYSCGEFGHI---------QKDCTKVKCYRCGET 106
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
GH+ +N S +V+CY CG+SGHL EC
Sbjct: 107 GHVA-INCSKT--SEVNCYRCGESGHLAREC 134
>gi|395333861|gb|EJF66238.1| hypothetical protein DICSQDRAFT_48600 [Dichomitus squalens LYAD-421
SS1]
Length = 197
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 69/185 (37%), Gaps = 30/185 (16%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLAS 477
P + TC NCG E H + C + + K C+ CG H + C Q N
Sbjct: 20 PKAGTPTCYNCGLEGHVSKDCTAETKAKTCYKCGQEGHISRECPDNQ----NANGGTSGG 75
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCE-------------GEYHADDLKKIQCYICK 524
+N S C RCG GH SC G + ++ CY C
Sbjct: 76 GSYTAFSSSNSGSTECYRCGKVGHIARSCPEAPGGTSGGYGGGGYSNFGGGQQRTCYTCG 135
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GHL + G K CYNC GH+ +C + CY CG EGH +R
Sbjct: 136 GVGHL--SRDCVQGSK---CYNCSGFGHISKDCP--------QPQRRACYTCGSEGHISR 182
Query: 585 RCGSN 589
C +N
Sbjct: 183 DCPNN 187
>gi|119499962|ref|XP_001266738.1| zinc knuckle transcription factor (CnjB), putative [Neosartorya
fischeri NRRL 181]
gi|119414903|gb|EAW24841.1| zinc knuckle transcription factor (CnjB), putative [Neosartorya
fischeri NRRL 181]
Length = 491
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 70/171 (40%), Gaps = 22/171 (12%)
Query: 425 CSNCGKENHTAATCK-----MQKQNKPCFLCGSFKHRWKNCKQGQ-DCFI--NKGS-EHL 475
CSNCG+ HTA CK + + C C + HR ++C + + D F N GS EH
Sbjct: 281 CSNCGEMGHTARGCKEERALVDRVEVKCVNCNASGHRARDCTEPRVDRFACRNCGSPEHK 340
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
A+DCP + C RC + GH C C C S H+
Sbjct: 341 AADCPNPRSAEGVE---CKRCNEMGHFAKDC-----PQAPAPRTCRNCGSEDHMARDCDK 392
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ V+C NC + GH +C S + C CG+ GH +RC
Sbjct: 393 PRDVSTVTCRNCEEVGHFSRDCPQK-----KDWSKVKCNNCGEMGHIIKRC 438
>gi|321249525|ref|XP_003191481.1| translation initiation factor IF-2 [Cryptococcus gattii WM276]
gi|317457948|gb|ADV19694.1| Translation initiation factor IF-2, putative [Cryptococcus gattii
WM276]
Length = 1629
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 519 QCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
+C+ C GH+ C +S G C+ C Q GH+ EC N+ + +C+KC
Sbjct: 721 ECHHCGKTGHIARMCPDSGYSGSIN-DCFRCQQPGHMARECPNTPGGGD------VCFKC 773
Query: 577 GKEGHFARRC 586
G+ GHFAR C
Sbjct: 774 GQAGHFAREC 783
>gi|242018245|ref|XP_002429589.1| zinc finger protein cchc domain containing protein, putative
[Pediculus humanus corporis]
gi|212514556|gb|EEB16851.1| zinc finger protein cchc domain containing protein, putative
[Pediculus humanus corporis]
Length = 380
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF +GS H+ S CP + N + C +CG + H C+ + +C+ICK
Sbjct: 228 CFHCRGSGHVLSQCPSLTETENTGTGICYKCGSTEHSAIECK-VVKGSSFQFAECFICKE 286
Query: 526 FGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
GH+ C N + +C CG HL +C +
Sbjct: 287 QGHIARQCPDNPRGLYPHGGACRECGDVTHLRKDCPKT 324
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 515 LKKIQCYICKSFGHLCCVNSSIIGLKQVS---CYNCGQSGHLGPECANSCEALNGKKSNL 571
LKK C+ C+ GH+ S+ + CY CG + H EC + + G
Sbjct: 223 LKKSVCFHCRGSGHVLSQCPSLTETENTGTGICYKCGSTEHSAIEC----KVVKGSSFQF 278
Query: 572 I-CYKCGKEGHFARRCGSN 589
C+ C ++GH AR+C N
Sbjct: 279 AECFICKEQGHIARQCPDN 297
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG--LKQVSCY 545
L + C C SGH LS C ++ CY C S H + G + C+
Sbjct: 223 LKKSVCFHCRGSGHVLSQCPSLTETENTGTGICYKCGSTEHSAIECKVVKGSSFQFAECF 282
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C + GH+ +C ++ L C +CG H + C
Sbjct: 283 ICKEQGHIARQCPDNPRGLYPHGG--ACRECGDVTHLRKDC 321
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 12/95 (12%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-----PCFLCGSFKHRWKNCK-------QGQDCFINKG 471
C +C H + C + + C+ CGS +H CK Q +CFI K
Sbjct: 227 VCFHCRGSGHVLSQCPSLTETENTGTGICYKCGSTEHSAIECKVVKGSSFQFAECFICKE 286
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
H+A CP +G C CGD H C
Sbjct: 287 QGHIARQCPDNPRGLYPHGGACRECGDVTHLRKDC 321
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC----GSNF 590
S+ LK+ C++C SGH+ +C + E N ICYKCG H A C GS+F
Sbjct: 219 SLSRLKKSVCFHCRGSGHVLSQCPSLTETEN--TGTGICYKCGSTEHSAIECKVVKGSSF 276
Query: 591 K 591
+
Sbjct: 277 Q 277
>gi|347828527|emb|CCD44224.1| hypothetical protein [Botryotinia fuckeliana]
Length = 280
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 69/196 (35%), Gaps = 39/196 (19%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C + + C+ C H C + + C+ +G H+ +D
Sbjct: 61 ACYKCGNVGHYAEVCASAE--RLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 118
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE--------------------------YHA 512
CP ++ C CG GH +C A
Sbjct: 119 CPTLRISGAGTTGRCYNCGMPGHLARACPNPNNGMQGPPRGLGAPRGGFGGGFAPRGGFA 178
Query: 513 DDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI 572
+ CY C H + + + CY CG++GH EC + +N K+
Sbjct: 179 GGPRPATCYKCGGPNHF----ARDCQAQAMKCYACGRTGHSSRECTSPNGGVN--KAGKT 232
Query: 573 CYKCGKEGHFARRCGS 588
CY CG EGH AR C S
Sbjct: 233 CYTCGTEGHIARDCPS 248
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 50/145 (34%), Gaps = 44/145 (30%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEG-------------EYHADDLKKI----QCYICKSFGH 528
++LS C +CG+ GH C E + L + QCY C+ GH
Sbjct: 55 SSLSRRACYKCGNVGHYAEVCASAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGH 114
Query: 529 LC--CVNSSIIGLKQVS-CYNCGQSGHLGPECANSCEALNGKKSNL-------------- 571
+ C I G CYNCG GHL C N + G L
Sbjct: 115 VQADCPTLRISGAGTTGRCYNCGMPGHLARACPNPNNGMQGPPRGLGAPRGGFGGGFAPR 174
Query: 572 ----------ICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 175 GGFAGGPRPATCYKCGGPNHFARDC 199
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC--------KQGQDCFINK 470
G TC CG NH A C+ Q C+ CG H + C K G+ C+
Sbjct: 180 GPRPATCYKCGGPNHFARDCQAQAMK--CYACGRTGHSSRECTSPNGGVNKAGKTCYTCG 237
Query: 471 GSEHLASDCPGTDQGNNLS 489
H+A DCP +NL+
Sbjct: 238 TEGHIARDCPSKGLNDNLA 256
>gi|310796854|gb|EFQ32315.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 182
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 81/189 (42%), Gaps = 40/189 (21%)
Query: 428 CGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSEHLASDCP--- 480
CG H A C + K C+ CG+ H ++C +G + C+ + H++ DCP
Sbjct: 7 CGAAGHQARECPNRGAAK-CYNCGNEGHMSRDCPEGPKDTKSCYRCGQAGHISRDCPQGG 65
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCE------------------GEYHADDLKKIQCYI 522
G SS+ C +CG+ GH +C G + CY
Sbjct: 66 NVGGGGGPSSSECYKCGEVGHVARNCPKSGGGYGGGQGGYGGGYGGGGGYGGASQKTCYS 125
Query: 523 CKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
C +GH+ C N S CYNCG++GH +C E+ G+K ICYKC + G
Sbjct: 126 CGGYGHMSRDCTNGS-------KCYNCGENGHFSRDCPK--ESSGGEK---ICYKCQQPG 173
Query: 581 HFARRCGSN 589
H +C +N
Sbjct: 174 HVQSQCPNN 182
>gi|443735051|gb|ELU18906.1| hypothetical protein CAPTEDRAFT_180220 [Capitella teleta]
Length = 651
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQS 550
C +CG+ GH C A C+ C GH C + G C+ CG+
Sbjct: 50 CYKCGEDGHFARECPS---AGGGGGGGCHKCGEEGHFARECPKAGGGGGGGRGCHKCGEE 106
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH EC ++ +G C KCG+EGHFAR C
Sbjct: 107 GHFARECPSA--GSSGGGGGSGCRKCGEEGHFAREC 140
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 520 CYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
CY C GH S G C+ CG+ GH EC +A G C+KCG+E
Sbjct: 50 CYKCGEDGHFARECPSAGGGGGGGCHKCGEEGHFARECP---KAGGGGGGGRGCHKCGEE 106
Query: 580 GHFARRCGS 588
GHFAR C S
Sbjct: 107 GHFARECPS 115
>gi|401420364|ref|XP_003874671.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490907|emb|CBZ26171.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 566
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 34/134 (25%)
Query: 454 KHRWKNCKQGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA 512
++RW C+ N GS H+ ++CP Q C +C GH +++C
Sbjct: 100 EYRWSVCR-------NCGSSRHIQANCPVRYQALE-----CYQCHQLGHIMTTC------ 141
Query: 513 DDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI 572
+ +CY C +FGH SS I + C++C SGH EC + +
Sbjct: 142 ---PQTRCYNCGTFGH-----SSQICHSKPHCFHCSHSGHRSSECPM-------RSKGRV 186
Query: 573 CYKCGKEGHFARRC 586
CY+C + GH A C
Sbjct: 187 CYQCNEPGHEAANC 200
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 41/159 (25%)
Query: 420 WNSETCSNCGKENHTAATCKMQKQ------------------NKPCFLCGSFKHRWKNCK 461
W+ C NCG H A C ++ Q C+ CG+F H + C
Sbjct: 103 WS--VCRNCGSSRHIQANCPVRYQALECYQCHQLGHIMTTCPQTRCYNCGTFGHSSQICH 160
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADDLKKIQC 520
CF S H +S+CP +G C +C + GH+ ++C +G+ C
Sbjct: 161 SKPHCFHCSHSGHRSSECPMRSKG-----RVCYQCNEPGHEAANCPQGQL---------C 206
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
+C GH + +V C C GH C N
Sbjct: 207 RMCHRPGHF------VAHCPEVVCNLCHVKGHTAGVCDN 239
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C +C H ++ C M+ + + C+ C H NC QGQ C + H + CP
Sbjct: 165 CFHCSHSGHRSSECPMRSKGRVCYQCNEPGHEAANCPQGQLCRMCHRPGHFVAHCPEV-- 222
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADD 514
C C GH C+ H D+
Sbjct: 223 -------VCNLCHVKGHTAGVCD-NVHCDN 244
>gi|361124091|gb|EHK96212.1| putative ATP-dependent RNA helicase glh-4 [Glarea lozoyensis 74030]
Length = 452
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 70/180 (38%), Gaps = 27/180 (15%)
Query: 425 CSNCGKENHTAATCKMQKQNKP------CFLCGSFKHRWKNCKQGQ----DCFINKGSEH 474
CSNC + HT C +KQ K CF C HR ++C + C K S H
Sbjct: 226 CSNCDQLGHTFKGCPEEKQEKTDKIVVSCFNCSEVGHRMRDCPVPRVDKFACRNCKASGH 285
Query: 475 LASDC--PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCV 532
+ +C P + +G C +C ++GH C C+ C GH
Sbjct: 286 SSKECTEPRSAEGVE-----CKKCNETGHFAKDCP--QGGGGGGGGACHNCGEEGHR--- 335
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
K+V C NC + GH+G +C L S + C C K GH RC K+
Sbjct: 336 KQDCTNEKKVQCRNCDEFGHVGRDCP-----LPRDYSRVTCTNCQKTGHTKVRCKEPVKE 390
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C C + GH + C + K C CK+ GH + + V C C ++GH
Sbjct: 254 CFNCSEVGHRMRDCP----VPRVDKFACRNCKASGHSSKECTEPRSAEGVECKKCNETGH 309
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISD 598
A C G C+ CG+EGH + C + K + R D
Sbjct: 310 F----AKDCPQGGGGGGGGACHNCGEEGHRKQDCTNEKKVQCRNCD 351
>gi|365988276|ref|XP_003670969.1| hypothetical protein NDAI_0F04080 [Naumovozyma dairenensis CBS 421]
gi|343769740|emb|CCD25726.1| hypothetical protein NDAI_0F04080 [Naumovozyma dairenensis CBS 421]
Length = 158
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 31/150 (20%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C++CG H ++C + C+ H+ S+CP Q + C CG++GH S C
Sbjct: 6 CYVCGKIGHLAEDCDSEKLCYNCNQPGHVQSECP---QPRTVEHKQCYNCGETGHVRSEC 62
Query: 507 EGEYHADDLKKIQCYICKSFGHLC--CV--------NSSIIGLKQVSCYNCGQSGHLGPE 556
+ +CY C GH+ C N+ G +VSCY CG H+ +
Sbjct: 63 TVQ---------RCYNCNQTGHISKDCPEPKKPYNSNNRRGGNSRVSCYKCGGPNHMAKD 113
Query: 557 CANSCEALNGKKSNLICYKCGKEGHFARRC 586
C +S+ CY CG GH +R C
Sbjct: 114 CT---------ESDPKCYNCGNTGHLSRDC 134
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NC + H + C + ++K C+ CG H C Q C+ + H++ DCP
Sbjct: 25 CYNCNQPGHVQSECPQPRTVEHKQCYNCGETGHVRSECTV-QRCYNCNQTGHISKDCPEP 83
Query: 483 DQGNNLSSN-------FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
+ N ++ C +CG H C D K CY C + GHL
Sbjct: 84 KKPYNSNNRRGGNSRVSCYKCGGPNHMAKDCT----ESDPK---CYNCGNTGHL--SRDC 134
Query: 536 IIGLKQVSCYNCGQSGHLGPECAN 559
G ++ +CY C ++GH+ +C N
Sbjct: 135 PEGPREKTCYKCNETGHISRDCPN 158
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 27/120 (22%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGE---YHADDLKKI-------------QCYICKSFGHLCC 531
+S C CG GH C+ E Y+ + + QCY C GH
Sbjct: 1 MSQRACYVCGKIGHLAEDCDSEKLCYNCNQPGHVQSECPQPRTVEHKQCYNCGETGH--- 57
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN-----GKKSNLICYKCGKEGHFARRC 586
V S + CYNC Q+GH+ +C + N G S + CYKCG H A+ C
Sbjct: 58 VRSECTVQR---CYNCNQTGHISKDCPEPKKPYNSNNRRGGNSRVSCYKCGGPNHMAKDC 114
>gi|391339398|ref|XP_003744037.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Metaseiulus
occidentalis]
Length = 182
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 69/159 (43%), Gaps = 31/159 (19%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQ-DCFINKGSEHLASDCPGTD 483
C C + H A CK + C+ C H K+C+QG+ C+ + H+A +CP D
Sbjct: 54 CYKCNRLGHFARDCKETEDR--CYRCNGTGHIAKDCQQGEMSCYNCGKTGHIARECPEVD 111
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS 543
+ C RCG GH C +D +K CY C FGH S L +
Sbjct: 112 KS-------CYRCGKPGHIFRDC-----PEDGQK--CYTCGRFGHF----SRECPLDR-R 152
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
CY CGQ GH+ EC G+ N +CY + HF
Sbjct: 153 CYVCGQGGHISREC-------QGEGQNDLCY--ARPSHF 182
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 512 ADDLKKIQ--CYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA---NSCEALNG 566
A D K+ + CY C GH+ + ++SCYNCG++GH+ EC SC G
Sbjct: 64 ARDCKETEDRCYRCNGTGHI----AKDCQQGEMSCYNCGKTGHIARECPEVDKSCYRC-G 118
Query: 567 KKSNLI---------CYKCGKEGHFARRC 586
K ++ CY CG+ GHF+R C
Sbjct: 119 KPGHIFRDCPEDGQKCYTCGRFGHFSREC 147
>gi|401843026|gb|EJT44984.1| GIS2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 153
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NC K H C M + + K C+ CG H C Q CF + H++ +CP
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECAV-QRCFNCNQTGHISKECPEP 83
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK 540
+ S C +CG H C E D ++CY C GH+ C N +
Sbjct: 84 KKATRFSKVSCYKCGGPNHMAKDCMKE---DGASGLKCYTCGQAGHMSRDCQNDRL---- 136
Query: 541 QVSCYNCGQSGHLGPECA 558
CYNC ++GH+ +C+
Sbjct: 137 ---CYNCNETGHISKDCS 151
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 46/118 (38%), Gaps = 30/118 (25%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCY 545
+S C CG GH C+ E CY C GH+ C + KQ CY
Sbjct: 1 MSQKACYVCGKIGHLAEDCDSER--------LCYNCNKPGHVQTDCTMPRTVEFKQ--CY 50
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLI-----------------CYKCGKEGHFARRC 586
NCG++GH+ ECA N ++ I CYKCG H A+ C
Sbjct: 51 NCGETGHVRSECAVQ-RCFNCNQTGHISKECPEPKKATRFSKVSCYKCGGPNHMAKDC 107
>gi|224120076|ref|XP_002318236.1| predicted protein [Populus trichocarpa]
gi|222858909|gb|EEE96456.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K G CFI K +H+A CP + + CL C GH L C + + + + + C
Sbjct: 68 KPGDSCFICKAKDHIAKLCPQKSEWER--NKICLLCRHRGHSLKRCPNK-NDETMDQKSC 124
Query: 521 YICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
Y C GH C G K +C+ C + GHL +C + + K C CG
Sbjct: 125 YNCGEKGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKGG--CCKVCG 182
Query: 578 KEGHFARRC 586
H AR C
Sbjct: 183 GVTHLARDC 191
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 10/122 (8%)
Query: 447 CFLCGSFKHRWKNCKQGQD------CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSG 500
CF+C + H K C Q + C + + H CP + + C CG+ G
Sbjct: 73 CFICKAKDHIAKLCPQKSEWERNKICLLCRHRGHSLKRCPNKND-ETMDQKSCYNCGEKG 131
Query: 501 HDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
H LS C K C+IC GHL C N+ I K C CG HL +C
Sbjct: 132 HSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKGGCCKVCGGVTHLARDC 191
Query: 558 AN 559
+
Sbjct: 192 PD 193
>gi|365758739|gb|EHN00566.1| Gis2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 153
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NC K H C M + + K C+ CG H C Q CF + H++ +CP
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECAV-QRCFNCNQTGHISRECPEP 83
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK 540
+ S C +CG H C E D ++CY C GH+ C N +
Sbjct: 84 KKATRFSKVSCYKCGGPNHMAKDCMKE---DGASGLKCYTCGQAGHMSRDCQNDRL---- 136
Query: 541 QVSCYNCGQSGHLGPECA 558
CYNC ++GH+ +C+
Sbjct: 137 ---CYNCNETGHISKDCS 151
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 23/101 (22%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCY 545
+S C CG GH C+ E CY C GH+ C + KQ CY
Sbjct: 1 MSQKACYVCGKIGHLAEDCDSER--------LCYNCNKPGHVQTDCTMPRTVEFKQ--CY 50
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
NCG++GH+ ECA C+ C + GH +R C
Sbjct: 51 NCGETGHVRSECAVQ-----------RCFNCNQTGHISREC 80
>gi|146104100|ref|XP_001469726.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398024576|ref|XP_003865449.1| hypothetical protein, conserved [Leishmania donovani]
gi|134074096|emb|CAM72838.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322503686|emb|CBZ38772.1| hypothetical protein, conserved [Leishmania donovani]
Length = 566
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 454 KHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD 513
++RW C+ S H+ ++CP Q C +C GH +++C
Sbjct: 100 EYRWSVCRHC------GSSRHIQANCPVRYQALE-----CYQCHQLGHMMTTC------- 141
Query: 514 DLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLIC 573
+ +CY C +FGH SS I + C++C SGH EC + +C
Sbjct: 142 --PQTRCYNCGTFGH-----SSQICHSKPHCFHCSHSGHRSSECPM-------RSKGRVC 187
Query: 574 YKCGKEGHFARRC 586
Y+C + GH A C
Sbjct: 188 YQCNEPGHEAANC 200
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 25/144 (17%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLA 476
P + + C C + H TC + C+ CG+F H + C CF S H +
Sbjct: 120 PVRYQALECYQCHQLGHMMTTCPQTR----CYNCGTFGHSSQICHSKPHCFHCSHSGHRS 175
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLCCVNSS 535
S+CP +G C +C + GH+ ++C +G+ C +C GH
Sbjct: 176 SECPMRSKG-----RVCYQCNEPGHEAANCPQGQL---------CRMCHRPGHF------ 215
Query: 536 IIGLKQVSCYNCGQSGHLGPECAN 559
+ +V C C GH C N
Sbjct: 216 VAHCPEVVCNLCHVKGHTAGVCDN 239
>gi|154305372|ref|XP_001553088.1| hypothetical protein BC1G_08455 [Botryotinia fuckeliana B05.10]
Length = 737
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 51/126 (40%), Gaps = 26/126 (20%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C +CGS H C +HL CP + C +C + GH S C
Sbjct: 442 CLICGSSGHDRSVCSDNACSSCGSKGDHLTPACP--------RNTICGKCREVGHQTSHC 493
Query: 507 EGEYHA--DDLKKIQCYICKSFGHL---CCV--NSSIIGLKQVS--------CYNCGQSG 551
+ A DD+K C C+S HL C V S + G ++ CY CG+ G
Sbjct: 494 PEKLRAVKDDIK---CNTCQSTSHLEDQCHVIWRSFLPGPNEIKKVRNILAFCYFCGRPG 550
Query: 552 HLGPEC 557
H GPEC
Sbjct: 551 HFGPEC 556
>gi|353236645|emb|CCA68635.1| hypothetical protein PIIN_02500 [Piriformospora indica DSM 11827]
Length = 257
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 464 QDCFINKGSEHLASDCPGTDQ--GNNLSSNFCLRCGDSGHDLSSCEGEY-HADDLKKIQC 520
+ CF + H A DCP + + C RCG + H L+ C A+ L C
Sbjct: 93 KTCFACRQKGHAAKDCPSNSELGEKRPVTGICYRCGATKHTLAKCRKPIDEANPLPFASC 152
Query: 521 YICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+ICK GHL C N I SC CGQ+ HL C
Sbjct: 153 FICKGKGHLASSCPQNEKGIYPNGGSCKLCGQTDHLARAC 192
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Query: 423 ETCSNCGKENHTAATCKMQKQ---NKP----CFLCGSFKHRWKNCKQGQD---------C 466
+TC C ++ H A C + +P C+ CG+ KH C++ D C
Sbjct: 93 KTCFACRQKGHAAKDCPSNSELGEKRPVTGICYRCGATKHTLAKCRKPIDEANPLPFASC 152
Query: 467 FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
FI KG HLAS CP ++G + C CG + H +C
Sbjct: 153 FICKGKGHLASSCPQNEKGIYPNGGSCKLCGQTDHLARAC 192
>gi|49887107|gb|AAT68794.1| gag protein [Simian immunodeficiency virus]
Length = 535
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 24/108 (22%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
+Q+ C+NCGQ GHL +C +K+ C+KCG+EGH A+ CG + + +
Sbjct: 419 RQIRCFNCGQIGHLQKDCKRP------RKTK--CFKCGQEGHIAKNCGQTPRANF-LGNT 469
Query: 600 LFTAERPPTRARHFVGSNG--TPHGLGN---------AQGRENDDQRE 636
+ + RP R+F+ G P + QG+EN+ QRE
Sbjct: 470 PWASRRP----RNFLEGIGKYIPESTADQVYSTTRVPVQGQENNPQRE 513
>gi|401623989|gb|EJS42066.1| gis2p [Saccharomyces arboricola H-6]
Length = 153
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 59/137 (43%), Gaps = 15/137 (10%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NC K H C M + + K C+ CG H C Q CF + H++ +CP
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTV-QRCFNCNQTGHISRECPEP 83
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK 540
+ + S C +CG H C E D ++CY C GH+ C N +
Sbjct: 84 KKASRFSKVSCYKCGGPNHMAKDCMKE---DGGNGMKCYTCGQAGHMSRDCQNDKL---- 136
Query: 541 QVSCYNCGQSGHLGPEC 557
CYNC ++GH+ EC
Sbjct: 137 ---CYNCNETGHISKEC 150
>gi|347828632|emb|CCD44329.1| hypothetical protein [Botryotinia fuckeliana]
Length = 737
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 51/126 (40%), Gaps = 26/126 (20%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C +CGS H C +HL CP + C +C + GH S C
Sbjct: 442 CLICGSSGHDRSVCSDNACSSCGSKGDHLTPACP--------RNTICGKCREVGHQTSHC 493
Query: 507 EGEYHA--DDLKKIQCYICKSFGHL---CCV--NSSIIGLKQVS--------CYNCGQSG 551
+ A DD+K C C+S HL C V S + G ++ CY CG+ G
Sbjct: 494 PEKLRAVKDDIK---CNTCQSTSHLEDQCHVIWRSFLPGPNEIKKVRNILAFCYFCGRPG 550
Query: 552 HLGPEC 557
H GPEC
Sbjct: 551 HFGPEC 556
>gi|427787097|gb|JAA59000.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 554
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD-DLKKIQCYICK 524
CF + H SDCP Q ++ C +CG + H S+C + D + +C+ICK
Sbjct: 410 CFKCRQPGHRVSDCPQMLQDSSEPIGICFKCGSTEHFSSACTVQTSKDNEFPYAKCFICK 469
Query: 525 SFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
GHL C N + K C CG H EC
Sbjct: 470 QQGHLSRKCPRNDKGVYPKGGHCNFCGAIDHFKKEC 505
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 490 SNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIG-LKQVSCY 545
+ C +C GH +S C C+ C S H C V +S C+
Sbjct: 407 AKLCFKCRQPGHRVSDCPQMLQDSSEPIGICFKCGSTEHFSSACTVQTSKDNEFPYAKCF 466
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C Q GHL +C + + + K + C CG HF + C
Sbjct: 467 ICKQQGHLSRKCPRNDKGVYPKGGH--CNFCGAIDHFKKEC 505
>gi|229366404|gb|ACQ58182.1| Cellular nucleic acid-binding protein [Anoplopoma fimbria]
Length = 170
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 72/187 (38%), Gaps = 49/187 (26%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP---------------CFLCGSFKHRWKNCKQGQD 465
+S C CG+ H A C C+ CG H ++C Q +D
Sbjct: 6 SSSECYQCGRSGHWAKHCPSSSMGSSGRGRGRGRGRGKDLFCYRCGDQGHMARDCDQTED 65
Query: 466 -CFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
C+ S H++ DC P ++ C C +GH C HA++ K CY
Sbjct: 66 ACYNCHRSGHISRDCKEPKKER-----EQLCYICNKAGHMARDCG---HANNQK---CYS 114
Query: 523 CKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
C FGH LC +V CY CG GH+ CA K S CY CG
Sbjct: 115 CGGFGHIQKLC---------DKVKCYRCGDIGHVAVHCA--------KTSETNCYNCGTA 157
Query: 580 GHFARRC 586
GH AR C
Sbjct: 158 GHLARDC 164
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 59/140 (42%), Gaps = 25/140 (17%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHLASDC 479
C CG + H A C + C+ C H ++CK+ Q C+I + H+A DC
Sbjct: 47 CYRCGDQGHMARDC--DQTEDACYNCHRSGHISRDCKEPKKEREQLCYICNKAGHMARDC 104
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
NN C CG GH C+ K++CY C GH V
Sbjct: 105 G---HANNQK---CYSCGGFGHIQKLCD---------KVKCYRCGDIGH---VAVHCAKT 146
Query: 540 KQVSCYNCGQSGHLGPECAN 559
+ +CYNCG +GHL +C N
Sbjct: 147 SETNCYNCGTAGHLARDCTN 166
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 19/109 (17%)
Query: 489 SSNFCLRCGDSGHDLSSC----------EGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
SS+ C +CG SGH C K + CY C GH+ +
Sbjct: 6 SSSECYQCGRSGHWAKHCPSSSMGSSGRGRGRGRGRGKDLFCYRCGDQGHM----ARDCD 61
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG 587
+ +CYNC +SGH+ +C K+ +CY C K GH AR CG
Sbjct: 62 QTEDACYNCHRSGHISRDCKEP-----KKEREQLCYICNKAGHMARDCG 105
>gi|212538011|ref|XP_002149161.1| zinc knuckle domain protein (Byr3), putative [Talaromyces marneffei
ATCC 18224]
gi|210068903|gb|EEA22994.1| zinc knuckle domain protein (Byr3), putative [Talaromyces marneffei
ATCC 18224]
Length = 183
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 71/177 (40%), Gaps = 23/177 (12%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG + H + C + K C+ CG H ++C+Q N G
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTQAPKEKSCYRCGQTGHISRDCQQSAPAGGNNGGFSR 81
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE------GEYHADDLKKIQCYICKSFGHL 529
C +CG GH +C G + ++ CY C +GH+
Sbjct: 82 GGF------SGGAGGQECYKCGQVGHIARNCSQGGSYGGGHGGFGGRQQTCYSCGGYGHM 135
Query: 530 CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G K CYNCG+ GH+ +C NG++ +CYKC + GH C
Sbjct: 136 --ARDCTQGQK---CYNCGEVGHVSRDCTTE---ANGER---VCYKCKQPGHVQSAC 181
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 68/171 (39%), Gaps = 41/171 (23%)
Query: 441 QKQNKPCFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGD 498
Q ++ CF CG H+ ++C K C+ G H++ +C + C RCG
Sbjct: 4 QSGSRGCFNCGEPSHQARDCPKKGTPTCYNCGGQGHVSRECTQAPK-----EKSCYRCGQ 58
Query: 499 SGHDLSSCEGEYHADD-------------LKKIQCYICKSFGHLCCVNSS---------- 535
+GH C+ A +CY C GH+ N S
Sbjct: 59 TGHISRDCQQSAPAGGNNGGFSRGGFSGGAGGQECYKCGQVGHI-ARNCSQGGSYGGGHG 117
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G +Q +CY+CG GH+ +C G+K CY CG+ GH +R C
Sbjct: 118 GFGGRQQTCYSCGGYGHMARDC------TQGQK----CYNCGEVGHVSRDC 158
>gi|238504168|ref|XP_002383316.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
flavus NRRL3357]
gi|220690787|gb|EED47136.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
flavus NRRL3357]
Length = 482
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 68/173 (39%), Gaps = 22/173 (12%)
Query: 425 CSNCGKENHTAATCK-----MQKQNKPCFLCGSFKHRWKNCKQGQ----DCFINKGSEHL 475
CSNCG+ HTA CK ++ C C + HR ++C + + C SEH
Sbjct: 270 CSNCGEMGHTARGCKEEHVVHERVEVKCVNCSAVGHRARDCTEPRRDRFACRNCGSSEHK 329
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
A++CP + C RC + GH C C C S H+
Sbjct: 330 AAECPNPRSAEGVE---CKRCNEVGHFAKDC-----PQAPAPRTCRNCGSEDHIARDCDK 381
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+ V+C NC + GH +C S + C CG+ GH +RC S
Sbjct: 382 PRDISTVTCRNCDEVGHFSRDCPKK-----KDWSKVKCNNCGEMGHTVKRCPS 429
>gi|67968237|dbj|BAE00180.1| VASA RNA helicase [Daphnia magna]
Length = 779
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQ 549
C +CG+ GH C C+ C GH C G +C+ CG+
Sbjct: 141 CHKCGEEGHMARECPKGGGGGGGGSRACHKCGEEGHFSRECPQAGGGGGSGPRTCHKCGE 200
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH EC G + C+KCG+EGHF+R C
Sbjct: 201 EGHFSRECPQGGGGGGGGGGSRACHKCGEEGHFSREC 237
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 7/118 (5%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H+A +CP G S C +CG+ GH C C+ C GH C
Sbjct: 149 HMARECPKGGGGGGGGSRACHKCGEEGHFSRECPQAGGGGGSGPRTCHKCGEEGHFSREC 208
Query: 532 VNSSIIGLKQV---SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G +C+ CG+ GH EC C+KCG+EGH +R C
Sbjct: 209 PQGGGGGGGGGGSRACHKCGEEGHFSRECPQGGGGGGSGPRT--CHKCGEEGHMSRDC 264
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 425 CSNCGKENHTAATCK-----MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
C CG+E H A C ++ C CG ++G H + +C
Sbjct: 141 CHKCGEEGHMARECPKGGGGGGGGSRACHKCG---------EEG----------HFSREC 181
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ--CYICKSFGHL---CCVNS 534
P G C +CG+ GH C C+ C GH C
Sbjct: 182 PQAGGGGGSGPRTCHKCGEEGHFSRECPQGGGGGGGGGGSRACHKCGEEGHFSRECPQGG 241
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
G +C+ CG+ GH+ +C +GK C+KC + GH ++ C + F +
Sbjct: 242 GGGGSGPRTCHKCGEEGHMSRDCPQGGGGGDGK-----CFKCHEAGHTSKDCPNPFSE 294
>gi|260943696|ref|XP_002616146.1| hypothetical protein CLUG_03387 [Clavispora lusitaniae ATCC 42720]
gi|238849795|gb|EEQ39259.1| hypothetical protein CLUG_03387 [Clavispora lusitaniae ATCC 42720]
Length = 171
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 71/179 (39%), Gaps = 32/179 (17%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ-----GQDCFINKGSEHLASD 478
+C CG+ H A C Q+Q + C+ C H C + + C++ H+ D
Sbjct: 5 SCYKCGESGHIADNC--QQQERLCYNCRQAGHESSACPEPKTAESKQCYLCGDIGHIRGD 62
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSC---EGEYHADD--------LKKIQCYICKSFG 527
CP + QG+ C C + GH C EG A K CY C
Sbjct: 63 CPNSAQGSK-----CYNCSEFGHISRECPKNEGAAPAAPAHKKSGKFTKSPTCYKCGGPN 117
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H + V CY+CG+SGH+ EC L K CY CG+ GH A+ C
Sbjct: 118 HF----AKDCQAGSVKCYSCGKSGHISKECT-----LASDKVTKSCYNCGQTGHIAKDC 167
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 19/144 (13%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
+P S+ C CG H C Q C+ C F H + C + N+G+
Sbjct: 41 EPKTAESKQCYLCGDIGHIRGDCPNSAQGSKCYNCSEFGHISRECPK------NEGAAPA 94
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
A G S C +CG H C+ ++CY C GH+
Sbjct: 95 APA--HKKSGKFTKSPTCYKCGGPNHFAKDCQ-------AGSVKCYSCGKSGHI--SKEC 143
Query: 536 IIGLKQV--SCYNCGQSGHLGPEC 557
+ +V SCYNCGQ+GH+ +C
Sbjct: 144 TLASDKVTKSCYNCGQTGHIAKDC 167
>gi|157876783|ref|XP_001686734.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
gi|68129809|emb|CAJ09115.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
Length = 115
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ CP ++ C CG++GH C E K CY C S
Sbjct: 6 CYKCGEAGHMSRSCP-----RAAATRSCYNCGETGHMSRDCPSE-----RKPKSCYNCGS 55
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G SCYNCG +GHL +C N ++ CY CG H +
Sbjct: 56 TDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPN-------ERKPKSCYNCGSTDHLS 108
Query: 584 RRC 586
R C
Sbjct: 109 REC 111
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNC 547
+S+ C +CG++GH SC CY C GH+ K SCYNC
Sbjct: 1 MSAVTCYKCGEAGHMSRSCP-----RAAATRSCYNCGETGHM--SRDCPSERKPKSCYNC 53
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + HL EC N EA G + CY CG GH +R C
Sbjct: 54 GSTDHLSRECTN--EAKAGADTR-SCYNCGGTGHLSRDC 89
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQD---CFIN 469
P + +C NCG+ H + C +++ K C+ CGS H + C K G D C+
Sbjct: 20 PRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNC 79
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
G+ HL+ DCP N C CG + H
Sbjct: 80 GGTGHLSRDCP-----NERKPKSCYNCGSTDH 106
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 33/137 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASDCP 480
TC CG+ H + +C + C+ CG H ++C ++ + C+ ++HL+ +C
Sbjct: 5 TCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRECT 64
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+ + C CG +GH C E K
Sbjct: 65 NEAKA-GADTRSCYNCGGTGHLSRDCPNE-----------------------------RK 94
Query: 541 QVSCYNCGQSGHLGPEC 557
SCYNCG + HL EC
Sbjct: 95 PKSCYNCGSTDHLSREC 111
>gi|426257255|ref|XP_004022245.1| PREDICTED: cellular nucleic acid-binding protein-like [Ovis aries]
Length = 170
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 62/142 (43%), Gaps = 26/142 (18%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C D N G S H+A DC + C CG GH
Sbjct: 47 CYRCGESGHHAKDCDLLDDICYNCGKSGHIAKDCA---EPKREGERCCYTCGRPGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C D ++ +CY C GH+ QV CY CG+ GH+ A+N
Sbjct: 104 C------DHQEEQKCYSCGKRGHI------QKDCTQVKCYRCGEIGHV---------AIN 142
Query: 566 GKK-SNLICYKCGKEGHFARRC 586
+K S + CY+CG+ GH AR C
Sbjct: 143 CRKMSEVNCYRCGESGHLAREC 164
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 25/138 (18%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSE-HLASDC 479
C CG+ H A C + + C+ CG H K+C ++G+ C G HLA DC
Sbjct: 47 CYRCGESGHHAKDCDLL--DDICYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDC 104
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
++ C CG GH D +++CY C GH V + +
Sbjct: 105 ------DHQEEQKCYSCGKRGHI---------QKDCTQVKCYRCGEIGH---VAINCRKM 146
Query: 540 KQVSCYNCGQSGHLGPEC 557
+V+CY CG+SGHL EC
Sbjct: 147 SEVNCYRCGESGHLAREC 164
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 52/143 (36%), Gaps = 41/143 (28%)
Query: 444 NKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
+K CF CG H + C +G + C T C RCG+SGH
Sbjct: 3 SKECFKCGRIGHWARGCSRGGARGRGARGRGRGAQCSSTTL-----PVICYRCGESGHHA 57
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C+ DD+ CYNCG+SGH+ +CA
Sbjct: 58 KDCD---LLDDI----------------------------CYNCGKSGHIAKDCAEP--- 83
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
++ CY CG+ GH AR C
Sbjct: 84 --KREGERCCYTCGRPGHLARDC 104
>gi|294874952|ref|XP_002767169.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239868618|gb|EEQ99886.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 141
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 50/129 (38%), Gaps = 15/129 (11%)
Query: 466 CFINKGSEHLASDCP--GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYIC 523
CFI H A DCP + + C CG H C E + C+ C
Sbjct: 18 CFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDCPNE----QTNQRPCFKC 73
Query: 524 KSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN------SCEALNGKKSNLICYKCG 577
GH +C+ CG++GHL +C N S A G+ C+KCG
Sbjct: 74 GKVGHF---ARDCTEPDTRACFRCGETGHLARDCPNEDTRPESERAPRGRSEGRNCFKCG 130
Query: 578 KEGHFARRC 586
K GH AR C
Sbjct: 131 KPGHLARDC 139
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQN-KPCFLCGSFKHRWKNCKQG--QDCFINKGSE 473
P G C NCGK +H A C ++ N +PCF CG H ++C + + CF +
Sbjct: 39 PTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGKVGHFARDCTEPDTRACFRCGETG 98
Query: 474 HLASDCPGTD---------QGNNLSSNFCLRCGDSGHDLSSC 506
HLA DCP D +G + N C +CG GH C
Sbjct: 99 HLARDCPNEDTRPESERAPRGRSEGRN-CFKCGKPGHLARDC 139
>gi|157876786|ref|XP_001686735.1| universal minicircle sequence binding protein [Leishmania major
strain Friedlin]
gi|68129810|emb|CAJ09116.1| universal minicircle sequence binding protein [Leishmania major
strain Friedlin]
Length = 175
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ CP ++ C CG++GH C E K CY C S
Sbjct: 66 CYKCGEAGHMSRSCP-----RAAATRSCYNCGETGHMSRDCPSE-----RKPKSCYNCGS 115
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G SCYNCG +GHL +C N ++ CY CG H +
Sbjct: 116 TDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPN-------ERKPKSCYNCGSTDHLS 168
Query: 584 RRC 586
R C
Sbjct: 169 REC 171
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNC 547
+S+ C +CG++GH SC CY C GH+ K SCYNC
Sbjct: 61 MSAVTCYKCGEAGHMSRSCP-----RAAATRSCYNCGETGHM--SRDCPSERKPKSCYNC 113
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + HL EC N +A +S CY CG GH +R C
Sbjct: 114 GSTDHLSRECTNEAKAGADTRS---CYNCGGTGHLSRDC 149
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQD---CFIN 469
P + +C NCG+ H + C +++ K C+ CGS H + C K G D C+
Sbjct: 80 PRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNC 139
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
G+ HL+ DCP N C CG + H
Sbjct: 140 GGTGHLSRDCP-----NERKPKSCYNCGSTDH 166
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG 587
H C SII + V+CY CG++GH+ + SC +S CY CG+ GH +R C
Sbjct: 51 HFCRSRPSII-MSAVTCYKCGEAGHM----SRSCPRAAATRS---CYNCGETGHMSRDCP 102
Query: 588 SNFKDR 593
S K +
Sbjct: 103 SERKPK 108
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 33/139 (23%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASDCP 480
TC CG+ H + +C + C+ CG H ++C ++ + C+ ++HL+ +C
Sbjct: 65 TCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSREC- 123
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+ + C CG +GH C E K
Sbjct: 124 TNEAKAGADTRSCYNCGGTGHLSRDCPNE-----------------------------RK 154
Query: 541 QVSCYNCGQSGHLGPECAN 559
SCYNCG + HL EC +
Sbjct: 155 PKSCYNCGSTDHLSRECPD 173
>gi|322710312|gb|EFZ01887.1| zinc knuckle domain protein [Metarhizium anisopliae ARSEF 23]
Length = 182
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 76/179 (42%), Gaps = 27/179 (15%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSEHLASDC 479
C +CG H A C + K C+ CG H ++C K+ + C+ H++ +C
Sbjct: 13 ACYSCGNPGHQARDCPSKGPAK-CYNCGGEGHMSRDCSEPMKENKSCYKCGQPGHISREC 71
Query: 480 P--GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ----------CYICKSFG 527
P G S C +CG+ GH +C + CY C +G
Sbjct: 72 PLGGAGGAGGAQSTECYKCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYG 131
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G+K CYNCG+SGH +C E+ G+K ICYKC + GH C
Sbjct: 132 HM--SRECVNGMK---CYNCGESGHYSRDCPK--ESSGGEK---ICYKCQQAGHVQSAC 180
>gi|146104175|ref|XP_001469750.1| putative universal minicircle sequence binding protein [Leishmania
infantum JPCM5]
gi|398024244|ref|XP_003865283.1| universal minicircle sequence binding protein, putative [Leishmania
donovani]
gi|134074120|emb|CAM72862.1| putative universal minicircle sequence binding protein [Leishmania
infantum JPCM5]
gi|322503520|emb|CBZ38606.1| universal minicircle sequence binding protein, putative [Leishmania
donovani]
Length = 115
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ CP ++ C CG++GH C E K CY C S
Sbjct: 6 CYKCGEAGHMSRSCP-----RAAATRSCYNCGETGHMSRDCPSE-----RKPKSCYNCGS 55
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G SCYNCG +GHL +C N ++ CY CG H +
Sbjct: 56 TDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPN-------ERKPKSCYNCGSTDHLS 108
Query: 584 RRC 586
R C
Sbjct: 109 REC 111
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNC 547
+S+ C +CG++GH SC CY C GH+ K SCYNC
Sbjct: 1 MSAITCYKCGEAGHMSRSCP-----RAAATRSCYNCGETGHM--SRDCPSERKPKSCYNC 53
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + HL EC N EA G + CY CG GH +R C
Sbjct: 54 GSTDHLSRECTN--EAKAGADTR-SCYNCGGTGHLSRDC 89
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQD---CFIN 469
P + +C NCG+ H + C +++ K C+ CGS H + C K G D C+
Sbjct: 20 PRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNC 79
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
G+ HL+ DCP N C CG + H
Sbjct: 80 GGTGHLSRDCP-----NERKPKSCYNCGSTDH 106
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 33/137 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASDCP 480
TC CG+ H + +C + C+ CG H ++C ++ + C+ ++HL+ +C
Sbjct: 5 TCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRECT 64
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+ + C CG +GH C E K
Sbjct: 65 NEAKA-GADTRSCYNCGGTGHLSRDCPNE-----------------------------RK 94
Query: 541 QVSCYNCGQSGHLGPEC 557
SCYNCG + HL EC
Sbjct: 95 PKSCYNCGSTDHLSREC 111
>gi|401420040|ref|XP_003874509.1| putative poly-zinc finger protein 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490745|emb|CBZ26009.1| putative poly-zinc finger protein 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 135
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 52/137 (37%), Gaps = 17/137 (12%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC-----KQGQDCFINKGSEHLASD 478
C CG H + C + PCF CG H K C + CF + H A D
Sbjct: 2 VCYRCGGVGHQSRECTSAADSAPCFRCGKPGHVAKECVSTITAEEAPCFYCQKPGHRARD 61
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL--CCVNSSI 536
CP D + C C GH S C H CY+C GH+ C +
Sbjct: 62 CP--DAPPKSETVMCYNCSQKGHIASECPNPAH--------CYLCNEDGHIGRSCPTAPK 111
Query: 537 IGLKQVSCYNCGQSGHL 553
+ + SC CG+ GHL
Sbjct: 112 RSVAEKSCRKCGKKGHL 128
>gi|429862592|gb|ELA37234.1| zinc knuckle transcription factor [Colletotrichum gloeosporioides
Nara gc5]
Length = 460
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 62/169 (36%), Gaps = 40/169 (23%)
Query: 423 ETCSNCGKENHTAATCKMQKQNK-----PCFLCGSFKHRWKNCKQGQDCFINKGSEHLAS 477
+ C+NC + HTA C K C+ CG HR
Sbjct: 257 QKCNNCDELGHTAKACPQDPNEKVRVTITCYNCGEEGHR-------------------VR 297
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DCP + C CG S H +S C A+ ++C C GH +
Sbjct: 298 DCPTP----RIDKFACKNCGQSRHKVSECTEPRSAE---GVECNKCNEMGHFG-RDCPTA 349
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G SC+NCGQ GH+ EC + L C C +EGH +R C
Sbjct: 350 GGGGRSCHNCGQEGHISKECT--------EPRKLKCRNCDEEGHHSRDC 390
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 20/144 (13%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-PCFLCGSFKHRWKNC-----KQGQDCFINKGSE--HL 475
TC NCG+E H C + +K C CG +H+ C +G +C NK +E H
Sbjct: 285 TCYNCGEEGHRVRDCPTPRIDKFACKNCGQSRHKVSECTEPRSAEGVEC--NKCNEMGHF 342
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
DCP G C CG GH C + +K++C C GH
Sbjct: 343 GRDCPTAGGG----GRSCHNCGQEGHISKECT------EPRKLKCRNCDEEGHHSRDCDK 392
Query: 536 IIGLKQVSCYNCGQSGHLGPECAN 559
+ ++ C NCG+ GH +C N
Sbjct: 393 PQDVTRIKCMNCGEMGHKKYKCPN 416
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 10/125 (8%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H A CP + C CG+ GH + C + K C C H
Sbjct: 267 HTAKACPQDPNEKVRVTITCYNCGEEGHRVRDCP----TPRIDKFACKNCGQSRHKVSEC 322
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
+ + V C C + GH G +C A G +S C+ CG+EGH ++ C K +
Sbjct: 323 TEPRSAEGVECNKCNEMGHFGRDCPT---AGGGGRS---CHNCGQEGHISKECTEPRKLK 376
Query: 594 LRISD 598
R D
Sbjct: 377 CRNCD 381
>gi|444314443|ref|XP_004177879.1| hypothetical protein TBLA_0A05670 [Tetrapisispora blattae CBS 6284]
gi|387510918|emb|CCH58360.1| hypothetical protein TBLA_0A05670 [Tetrapisispora blattae CBS 6284]
Length = 173
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 28/169 (16%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NC + H + C M++ + K C+ CG H C Q C+ + H++ DCP
Sbjct: 26 CYNCNQPGHLQSECTMERTAEFKQCYACGETGHVRSECTA-QRCYSCGETGHMSRDCPSG 84
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK 540
+ F H+ G ++ CY C H+ C+ S
Sbjct: 85 NSNGRRGGRF--------HNNRGGAGG------SRVSCYKCGGPNHMARDCLQS------ 124
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSN-LICYKCGKEGHFARRCGS 588
+ CY+CG+ GHL +C S ++G SN +CY CG+ GH +R C S
Sbjct: 125 ESKCYSCGKFGHLARDCPAS--GMSGGASNDRVCYACGESGHISRDCPS 171
>gi|118485064|gb|ABK94395.1| unknown [Populus trichocarpa]
Length = 278
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 65/174 (37%), Gaps = 31/174 (17%)
Query: 392 DARKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQ---KQNKPCF 448
D + N+A + LR P PG ++C C ++H A C + ++NK C
Sbjct: 50 DPKDPNKANKKGFRKQPLRVPGMK--PG---DSCFICKAKDHIAKLCPQKDEWEKNKICL 104
Query: 449 LCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG 508
LC H K C + D + C CG++GH LS C
Sbjct: 105 LCRHRGHSLKRCPKKND--------------------ETMDQKLCYNCGETGHSLSQCPQ 144
Query: 509 EYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
K C+IC GHL C N+ I K C CG HL +C +
Sbjct: 145 PREDGGTKFANCFICNERGHLSKDCPKNNRGIYPKGGCCKLCGGVTHLARDCPD 198
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 29/129 (22%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K G CFI K +H+A CP D+ + CL C GH L C +
Sbjct: 73 KPGDSCFICKAKDHIAKLCPQKDEWE--KNKICLLCRHRGHSLKRCPKKNDET------- 123
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
+ Q CYNCG++GH +C E K +N C+ C + G
Sbjct: 124 ------------------MDQKLCYNCGETGHSLSQCPQPREDGGTKFAN--CFICNERG 163
Query: 581 HFARRCGSN 589
H ++ C N
Sbjct: 164 HLSKDCPKN 172
>gi|326513731|dbj|BAJ87884.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 85/187 (45%), Gaps = 43/187 (22%)
Query: 424 TCSNCGKENHTAATCKMQ-KQNK-PCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPG 481
TC CGKE H ++ C + K++K C +C H C C NK SE+ A
Sbjct: 91 TCLVCGKEGHYSSKCYFKDKEHKLICTVCSKNGHCSMWC-----CQQNK-SEYRA----- 139
Query: 482 TDQGNNLSSNFCLRCGDSGHD-------LSSCEGEYHADD---LKKIQCYICKSFGHL-- 529
C RCG+ GH SSC+ EYH D L +++C+IC+S H
Sbjct: 140 -----------CTRCGEIGHSTSTHGLGCSSCD-EYHDDGECRLSEVKCFICESQDHYLA 187
Query: 530 -CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCE--ALNGKKSNLICYKCGKEGHFARRC 586
C +N G Q++ G + +C+ E L KS+ IC+ C +EGHFA +C
Sbjct: 188 QCPLN--FQGALQLALSKQGNTSSAPAKCSAKSEGKVLTANKSSPICFTC-REGHFAFQC 244
Query: 587 GSNFKDR 593
N DR
Sbjct: 245 PQNSPDR 251
>gi|393217722|gb|EJD03211.1| prokaryotic type I DNA topoisomerase [Fomitiporia mediterranea
MF3/22]
Length = 1081
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 13/98 (13%)
Query: 490 SNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQ 549
S+ C CG SGH S+C A+ + + I S G++ SS +C+ CG+
Sbjct: 925 SDECFNCGQSGHWASACPNGAQANRNRAMS--IDSSAGNVNPNPSS----SSTACFKCGE 978
Query: 550 SGHLGPECANSCEALNGKKSNL-ICYKCGKEGHFARRC 586
GH C N GK S++ C+KCG EGH++ C
Sbjct: 979 EGHYSSACPN------GKNSSIGACFKCGDEGHYSNAC 1010
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 16/69 (23%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEA----------------LNGKKSNLICYKCG 577
S G + C+NCGQSGH C N +A N S+ C+KCG
Sbjct: 918 SVTAGTRSDECFNCGQSGHWASACPNGAQANRNRAMSIDSSAGNVNPNPSSSSTACFKCG 977
Query: 578 KEGHFARRC 586
+EGH++ C
Sbjct: 978 EEGHYSSAC 986
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQ---NKPCFLCGSFKHRWKNCKQGQDCFINKGSE-H 474
G S+ C NCG+ H A+ C Q N+ + S + N G E H
Sbjct: 922 GTRSDECFNCGQSGHWASACPNGAQANRNRAMSIDSSAGNVNPNPSSSSTACFKCGEEGH 981
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
+S CP G N S C +CGD GH ++C
Sbjct: 982 YSSACP---NGKNSSIGACFKCGDEGHYSNAC 1010
>gi|332021507|gb|EGI61872.1| CCHC-type zinc finger protein [Acromyrmex echinatior]
Length = 143
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
CF C F H + CK+ QD C+ G H+A DC QG LS C C +GH S
Sbjct: 34 CFKCNQFGHFARECKEDQDLCYRCNGVGHIAKDC---QQGPELS---CYNCNKTGHMARS 87
Query: 506 C-EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
C EG + CY C GH+ N + G K +CY CG++GH+ EC
Sbjct: 88 CPEGGNDSGRFAMQSCYNCNKTGHI-ARNCTEAGGK--TCYICGKTGHISREC 137
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +C GH C+ + DL CY C GH + ++SCYNC ++GH
Sbjct: 34 CFKCNQFGHFARECKED---QDL----CYRCNGVGH---IAKDCQQGPELSCYNCNKTGH 83
Query: 553 LGPECANSCEALN--GKKSNLICYKCGKEGHFARRC 586
+ C E N G+ + CY C K GH AR C
Sbjct: 84 MARSCP---EGGNDSGRFAMQSCYNCNKTGHIARNC 116
>gi|68482666|ref|XP_714730.1| hypothetical protein CaO19.10692 [Candida albicans SC5314]
gi|68482937|ref|XP_714599.1| hypothetical protein CaO19.3182 [Candida albicans SC5314]
gi|46436181|gb|EAK95548.1| hypothetical protein CaO19.3182 [Candida albicans SC5314]
gi|46436321|gb|EAK95685.1| hypothetical protein CaO19.10692 [Candida albicans SC5314]
gi|238882592|gb|EEQ46230.1| zinc-finger protein GIS2 [Candida albicans WO-1]
Length = 175
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 69/188 (36%), Gaps = 29/188 (15%)
Query: 378 RKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRY-----FDPPGWNSETCSNCGKEN 432
R + E +D ++E YN KP + DP ++ C +CG
Sbjct: 7 RTCYKCGEVGHVADDCQQEERLCYN------CHKPGHESNDCPDPKQNTAKQCYSCGDVG 60
Query: 433 HTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNF 492
H C Q Q C+ CG F H KNC N S S S
Sbjct: 61 HIQTECPNQAQGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPS--------GRASGTT 112
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQ 549
C +CG H C+ ++CY C GH+ C ++ +CYNCG+
Sbjct: 113 CYKCGGPNHFARDCQ-------ANTVKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGK 165
Query: 550 SGHLGPEC 557
SGH+ EC
Sbjct: 166 SGHISKEC 173
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 60/153 (39%), Gaps = 42/153 (27%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H +C+Q + C+ H ++DCP Q ++ C CGD GH +
Sbjct: 9 CYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQN---TAKQCYSCGDVGHIQTE 65
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C + + CYNCGQ GH+ C ++ + N
Sbjct: 66 CPNQ-----------------------------AQGAKCYNCGQFGHISKNCDSAPSSTN 96
Query: 566 ---------GKKSNLICYKCGKEGHFARRCGSN 589
G+ S CYKCG HFAR C +N
Sbjct: 97 NAPSFKRPSGRASGTTCYKCGGPNHFARDCQAN 129
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 71/179 (39%), Gaps = 29/179 (16%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
TC CG+ H A C Q++ + C+ C H +C + C+ H+ ++
Sbjct: 8 TCYKCGEVGHVADDC--QQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTE 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEY----HADDLKK-------IQCYICKSFG 527
CP QG C CG GH +C+ +A K+ CY C
Sbjct: 66 CPNQAQGAK-----CYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPN 120
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H + V CY CG+ GH+ +C +S A S CY CGK GH ++ C
Sbjct: 121 HF----ARDCQANTVKCYACGKVGHISKDCHSS--AGGSNFSAKTCYNCGKSGHISKEC 173
>gi|391339578|ref|XP_003744125.1| PREDICTED: uncharacterized protein LOC100903131 [Metaseiulus
occidentalis]
Length = 585
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 77/206 (37%), Gaps = 52/206 (25%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
LR+ RY S+ C NC + H C + ++ C LC
Sbjct: 273 LRRNRYH-----TSKECRNCRQSGHLTHECPLPERIV-CILCAD---------------- 310
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
+ H+A+ CP + C C + GH C Y A L + QC IC FGH
Sbjct: 311 ---TTHIAARCP---------NKICSTCKNEGHTWWRC---YRAQHLLETQCRICNIFGH 355
Query: 529 ---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
+C N ++ C + + PE E L+ K C CG+ GHFA
Sbjct: 356 KADICPDN-----WRRFHCTT-REGPPIAPEAG---EKLSLAKK--FCSWCGRRGHFATD 404
Query: 586 CGSNFKDRLRISDLLFTAERPPTRAR 611
CG + S + + + P T AR
Sbjct: 405 CGRAANSGI-ASRFVHSYKEPRTSAR 429
>gi|408396967|gb|EKJ76118.1| hypothetical protein FPSE_03593 [Fusarium pseudograminearum CS3096]
Length = 1380
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 69/188 (36%), Gaps = 40/188 (21%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C NC + NHT+ C ++ + C CG H + NC D
Sbjct: 1106 CGNCAEINHTSGECPLE--HFLCSACGRKGHHFFNCTTSAD------------------- 1144
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEG--EYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
+ +C +C GH C E+ D + +C+ C GH + +
Sbjct: 1145 -----TQWCTKCKTRGHTHFRCPETREHSQPDEFRFKCHNCDKQGHKAADCTEPPKTENR 1199
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR-LRISDLLF 601
C+NCG+ GH+ C C+ CG + H + C +R ++ L
Sbjct: 1200 KCFNCGEYGHMKSNCPER-----------QCHFCGDKDHLKKDCPHERCNRCFQLGHLAP 1248
Query: 602 TAERPPTR 609
T + PPT+
Sbjct: 1249 TCKNPPTQ 1256
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 54/146 (36%), Gaps = 27/146 (18%)
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLR--CGDSGHDLSSCEGEY--- 510
R+K+CK+ + +H A DC D N+S C R CGD GH + C +
Sbjct: 1057 RFKSCKKCET------HDHTADDCTADDI--NMSDKVCERTSCGDKGHTAAFCPKRFCGN 1108
Query: 511 -----HAD---DLKKIQCYICKSFGH--LCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
H L+ C C GH C S+ C C GH C +
Sbjct: 1109 CAEINHTSGECPLEHFLCSACGRKGHHFFNCTTSA----DTQWCTKCKTRGHTHFRCPET 1164
Query: 561 CEALNGKKSNLICYKCGKEGHFARRC 586
E + C+ C K+GH A C
Sbjct: 1165 REHSQPDEFRFKCHNCDKQGHKAADC 1190
>gi|157877134|ref|XP_001686898.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129973|emb|CAJ09281.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 566
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 34/134 (25%)
Query: 454 KHRWKNCKQGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA 512
++RW C+ N GS H+ ++CP Q C +C GH +++C
Sbjct: 100 EYRWSVCR-------NCGSSRHIQANCPVRYQALE-----CYQCHQLGHMMTTC------ 141
Query: 513 DDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI 572
+ +CY C +FGH SS I + C++C SGH EC + +
Sbjct: 142 ---PQTRCYNCGTFGH-----SSQICHSKPHCFHCSHSGHRSSECPM-------RSKGRV 186
Query: 573 CYKCGKEGHFARRC 586
CY+C + GH A C
Sbjct: 187 CYQCNEPGHEAANC 200
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 58/159 (36%), Gaps = 39/159 (24%)
Query: 420 WNSETCSNCGKENHTAATCKMQKQ------------------NKPCFLCGSFKHRWKNCK 461
+ C NCG H A C ++ Q C+ CG+F H + C
Sbjct: 101 YRWSVCRNCGSSRHIQANCPVRYQALECYQCHQLGHMMTTCPQTRCYNCGTFGHSSQICH 160
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADDLKKIQC 520
CF S H +S+CP +G C +C + GH+ ++C +G+ C
Sbjct: 161 SKPHCFHCSHSGHRSSECPMRSKG-----RVCYQCNEPGHEAANCPQGQL---------C 206
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
+C GH + +V C C GH C N
Sbjct: 207 RMCHRPGHF------VAHCPEVVCNLCHLKGHTAGVCDN 239
>gi|327263026|ref|XP_003216322.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Anolis carolinensis]
Length = 262
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 29/145 (20%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K CF + H +DCP + ++ + C RCG + H++S C +
Sbjct: 116 KNAMVCFHCRQPGHGVADCPAVLESQDMGTGICFRCGSTEHEISKCRAK----------- 164
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
++ ++ C+ CG+ GHL C ++ + L + C CG
Sbjct: 165 -----------IDPALGEFPYAKCFICGEMGHLSRSCPDNPKGLYAHGGS--CRICGSVE 211
Query: 581 HFARRCGSNFKDRLRISDLLFTAER 605
HF R C N + SD + T R
Sbjct: 212 HFKRDCPEN-----QSSDCVVTVGR 231
>gi|343427250|emb|CBQ70778.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Sporisorium
reilianum SRZ2]
Length = 180
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 447 CFLCGSFKHRWKNCK-QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C++CG H +NC + CF + H +S CP + C CG GH +
Sbjct: 7 CYVCGQLGHLAENCSFTDRRCFNCLEAGHESSACPAP---RTTETKQCYNCGGKGHIKAD 63
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL-KQVSCYNCGQSGHLGPECANSCEAL 564
C + +CY C GH V ++ + ++ C+ CG +GH+ CA
Sbjct: 64 CP------TIDTQECYGCGGKGH---VKANCPTVDREKKCFGCGGTGHVRANCAT---VR 111
Query: 565 NGKKSNLICYKCGKEGHFARRC 586
+G ++ L C KCG HFAR C
Sbjct: 112 SGGRAGLTCRKCGGPNHFARDC 133
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASDC 479
C CG+ H A C ++ CF C H C + + C+ G H+ +DC
Sbjct: 7 CYVCGQLGHLAENCSFT--DRRCFNCLEAGHESSACPAPRTTETKQCYNCGGKGHIKADC 64
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL--CCVNSSII 537
P D + C CG GH ++C D KK C+ C GH+ C
Sbjct: 65 PTID------TQECYGCGGKGHVKANCP---TVDREKK--CFGCGGTGHVRANCATVRSG 113
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G ++C CG H +C A NG K+ CY C + GH AR C
Sbjct: 114 GRAGLTCRKCGGPNHFARDCKAD-GAANGVKAK-TCYTCNQTGHIARLC 160
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC-------KQGQDCFI 468
D P +++ C CG + H A C + K CF CG H NC + G C
Sbjct: 63 DCPTIDTQECYGCGGKGHVKANCPTVDREKKCFGCGGTGHVRANCATVRSGGRAGLTCRK 122
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
G H A DC N + + C C +GH
Sbjct: 123 CGGPNHFARDCKADGAANGVKAKTCYTCNQTGH 155
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK---QGQDCFINKGSEHLASD 478
++ C NCG + H A C + C+ CG H NC + + CF G+ H+ ++
Sbjct: 48 TKQCYNCGGKGHIKADCPTIDTQE-CYGCGGKGHVKANCPTVDREKKCFGCGGTGHVRAN 106
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
C G C +CG H C+ + A+ +K CY C GH+
Sbjct: 107 CATVRSGGRAGLT-CRKCGGPNHFARDCKADGAANGVKAKTCYTCNQTGHI 156
>gi|58258751|ref|XP_566788.1| hypothetical protein CNA05020 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134106947|ref|XP_777786.1| hypothetical protein CNBA4840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260484|gb|EAL23139.1| hypothetical protein CNBA4840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222925|gb|AAW40969.1| hypothetical protein CNA05020 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1641
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 519 QCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
+C+ C GH+ C ++ G C+ C Q GH+ EC N+ + C+KC
Sbjct: 655 ECHHCGKTGHIARMCPDTGYSGSPN-DCFRCQQPGHMARECPNTFGGGD------ACFKC 707
Query: 577 GKEGHFARRC 586
G+ GHFAR C
Sbjct: 708 GQPGHFAREC 717
>gi|255082406|ref|XP_002504189.1| predicted protein [Micromonas sp. RCC299]
gi|226519457|gb|ACO65447.1| predicted protein [Micromonas sp. RCC299]
Length = 938
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 29/116 (25%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLC-- 530
H+A +CP C CG+ GH C +G ++ C++C GHL
Sbjct: 654 HIARECPNAPG----EQRTCHVCGEGGHIARDCPQGPSRPEERA---CHVCGESGHLARD 706
Query: 531 CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C Q +C+NCG+ GH EC + C +CG++GH AR C
Sbjct: 707 C--------PQSTCHNCGKPGHRAAECPEA-----------RCRRCGEKGHMARDC 743
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 47/144 (32%), Gaps = 49/144 (34%)
Query: 424 TCSNCGKENHTAATCK-MQKQNKPCFLCGSFKHRWKNCKQGQD------CFINKGSEHLA 476
TC CG H A C + + C +CG H ++C QG C + S HLA
Sbjct: 645 TCHKCGMPGHIARECPNAPGEQRTCHVCGEGGHIARDCPQGPSRPEERACHVCGESGHLA 704
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSI 536
DCP + C CG GH + C
Sbjct: 705 RDCP---------QSTCHNCGKPGHRAAEC------------------------------ 725
Query: 537 IGLKQVSCYNCGQSGHLGPECANS 560
+ C CG+ GH+ +C N
Sbjct: 726 ---PEARCRRCGEKGHMARDCVNP 746
>gi|56681248|gb|AAW21258.1| gag protein [Simian immunodeficiency virus]
Length = 527
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSNL-ICYKCGKEGHFARRCGSNFKDRLRISDL 599
Q+ CYNCG+ GH+ A +C A +K CYKCGK GH A++C S + L S
Sbjct: 407 QIRCYNCGKFGHI----AKNCPAPPRQKVPPGTCYKCGKPGHIAKQCSSAQANFLGKS-- 460
Query: 600 LFTAERPPTR-ARHF 613
F + PP R R+F
Sbjct: 461 -FLGKIPPVRGPRNF 474
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 517 KIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGK 567
+I+CY C FGH+ C + +CY CG+ GH+ +C+++ GK
Sbjct: 407 QIRCYNCGKFGHIAKNCPAPPRQKVPPGTCYKCGKPGHIAKQCSSAQANFLGK 459
>gi|417398164|gb|JAA46115.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 271
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALESQDMGTGICYRCGSTEHEITKCKANVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG GH +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGVYADGGCCRLCGSVGHFKKDCPQS 229
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +++ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALESQDMGTGICYRCGSTEHEITKCKANVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG GH C H+D + +
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGVYADGGCCRLCGSVGHFKKDCPQSQHSDQMVTV 238
>gi|326483283|gb|EGE07293.1| zinc knuckle domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 210
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 72/201 (35%), Gaps = 57/201 (28%)
Query: 413 RYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGS 472
R D P + TC NCG + H + C + K C+ CG +
Sbjct: 38 RARDCPKKGTPTCYNCGGQGHVSRECTQPPKEKSCYRCGM-------------------T 78
Query: 473 EHLASDCPGTDQGNN---------LSSNFCLRCGDSGHDLSSCEGE-------------- 509
H++ +CP + G+N C +CG GH +C +
Sbjct: 79 GHISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGS 138
Query: 510 ----YHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
+ CY C +GH+ G K CYNCG+ GH+ +C EA
Sbjct: 139 GSYGSGGYGGRSQTCYSCGGYGHM--ARDCTQGQK---CYNCGEVGHVSRDCPT--EA-- 189
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K +CYKC + GH C
Sbjct: 190 --KGERVCYKCKQAGHVQAAC 208
>gi|6324074|ref|NP_014144.1| Gis2p [Saccharomyces cerevisiae S288c]
gi|1730843|sp|P53849.1|GIS2_YEAST RecName: Full=Zinc finger protein GIS2
gi|1255963|emb|CAA65489.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1302303|emb|CAA96162.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45269894|gb|AAS56328.1| YNL255C [Saccharomyces cerevisiae]
gi|151944292|gb|EDN62570.1| gig suppressor [Saccharomyces cerevisiae YJM789]
gi|190409228|gb|EDV12493.1| zinc-finger protein GIS2 [Saccharomyces cerevisiae RM11-1a]
gi|256272390|gb|EEU07373.1| Gis2p [Saccharomyces cerevisiae JAY291]
gi|285814410|tpg|DAA10304.1| TPA: Gis2p [Saccharomyces cerevisiae S288c]
gi|323303323|gb|EGA57119.1| Gis2p [Saccharomyces cerevisiae FostersB]
gi|323307479|gb|EGA60750.1| Gis2p [Saccharomyces cerevisiae FostersO]
gi|323335863|gb|EGA77141.1| Gis2p [Saccharomyces cerevisiae Vin13]
gi|349580694|dbj|GAA25853.1| K7_Gis2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297096|gb|EIW08197.1| Gis2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 153
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 63/164 (38%), Gaps = 40/164 (24%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NC K H C M + + K C+ CG H C Q CF + H++ +CP
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTV-QRCFNCNQTGHISRECPEP 83
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
+ + S C +CG H C E I GLK
Sbjct: 84 KKTSRFSKVSCYKCGGPNHMAKDCMKE------------------------DGISGLK-- 117
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY CGQ+GH+ +C N + +CY C + GH ++ C
Sbjct: 118 -CYTCGQAGHMSRDCQN----------DRLCYNCNETGHISKDC 150
>gi|126631880|gb|AAI34046.1| Zcchc7l protein [Danio rerio]
Length = 512
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 20/141 (14%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPG 481
S TC NC K H + C K+ C LCG H + C + C H + DC
Sbjct: 248 SITCRNCNKTGHLSKNCPTLKKVPCCSLCGLRGHLLRTCP-NRHCSNCSLPGHTSDDC-- 304
Query: 482 TDQGNNLSSNF----CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
L F C RCG +GH + +C + L I KS C
Sbjct: 305 ------LERAFWYKRCHRCGMTGHFIDACPQIWRQYHLTTTAGPIRKSADPKAC------ 352
Query: 538 GLKQVSCYNCGQSGHLGPECA 558
K+ CYNC + GH G +C+
Sbjct: 353 -QKRAYCYNCSRKGHFGHQCS 372
>gi|171691679|ref|XP_001910764.1| hypothetical protein [Podospora anserina S mat+]
gi|170945788|emb|CAP72588.1| unnamed protein product [Podospora anserina S mat+]
Length = 723
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 28/132 (21%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C + SEH +++CP ++ FC + H +C + +C CK
Sbjct: 446 CVMCASSEHNSAECP------EMACKFCHK----DHPCWTCPA--------RQRCSKCKQ 487
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSN--------LICYK 575
GH C I+ ++ C CG H+ C N + SN + CY+
Sbjct: 488 LGHSVAECKERLILAQDEMDCALCGSRDHIEYSCVNLTRSFRPNPSNTPKVQSLPVFCYR 547
Query: 576 CGKEGHFARRCG 587
CG EGH+ CG
Sbjct: 548 CGAEGHYGGDCG 559
>gi|387019991|gb|AFJ52113.1| Zinc finger CCHC domain-containing protein 9-like [Crotalus
adamanteus]
Length = 263
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 24/124 (19%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF + H +DCP + ++ + C RCG + H+++ C+ +
Sbjct: 122 CFHCRKPGHGVADCPAVLESQDMGTGICYRCGSTEHEINKCKAK---------------- 165
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
++ ++ C+ CG+ GHL C ++ + L + + C CG HF R
Sbjct: 166 ------IDPALGEFPYAKCFICGEMGHLSRSCPDNPKGLYAEGGS--CRICGSVEHFKRD 217
Query: 586 CGSN 589
C N
Sbjct: 218 CPEN 221
>gi|348503938|ref|XP_003439519.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Oreochromis niloticus]
Length = 275
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 24/121 (19%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF + H +DCP D+ + C RCG + H++ C+ +
Sbjct: 136 CFNCRKPGHGLADCPEADRDEEMGRGICFRCGSTEHEIYKCKAK---------------- 179
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
V+ ++ C+ CGQ+GHL C ++ + L + C+ CG HF +
Sbjct: 180 ------VDPALGDYPYAKCFICGQTGHLSRSCPDNPKGLYAQGG--CCHVCGSVEHFQKD 231
Query: 586 C 586
C
Sbjct: 232 C 232
>gi|195619936|gb|ACG31798.1| cellular nucleic acid-binding protein [Zea mays]
gi|414873648|tpg|DAA52205.1| TPA: cellular nucleic acid-binding protein [Zea mays]
Length = 254
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 78/199 (39%), Gaps = 36/199 (18%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
R+P +F ++ C+NC H AA C +Q C+ C H CK C
Sbjct: 64 CRRPGHFAKECPSAPMCNNCNLPGHFAAECTLQTV---CWNCKESGHIASECKNEALCHA 120
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKK----------- 517
+ HLA DCP G N+ C +C SGH C E ++ ++
Sbjct: 121 CNKTGHLARDCP--TSGANVK--LCNKCFKSGHIAVDCTNERACNNCRQPGHIARECKND 176
Query: 518 IQCYICKSFGHLC--CVNSSIIGLKQ------VSCYNCGQSGHLGPECANSCEALNGKKS 569
C +C GH+ C +++ + Q + C CGQ GH+ C +
Sbjct: 177 PVCNLCNVSGHVARVCPKTTLASVIQGGPFRDILCRICGQPGHISRNC----------MA 226
Query: 570 NLICYKCGKEGHFARRCGS 588
+IC CG GH + C S
Sbjct: 227 TIICDTCGGRGHMSYECPS 245
>gi|21105474|gb|AAM34680.1|AF506236_1 FLJ22611-like protein [Danio rerio]
Length = 537
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 20/141 (14%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPG 481
S TC NC K H + C K+ C LCG H + C + C H + DC
Sbjct: 273 SITCRNCNKTGHLSKNCPTLKKVPCCSLCGLRGHLLRTCP-NRHCSNCSLPGHTSDDC-- 329
Query: 482 TDQGNNLSSNF----CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
L F C RCG +GH + +C + L I KS C
Sbjct: 330 ------LERAFWYKRCHRCGMTGHFIDACPQIWRQYHLTTTAGPIRKSADPKAC------ 377
Query: 538 GLKQVSCYNCGQSGHLGPECA 558
K+ CYNC + GH G +C+
Sbjct: 378 -QKRAYCYNCSRKGHFGHQCS 397
>gi|154346046|ref|XP_001568960.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066302|emb|CAM44093.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 573
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 63/171 (36%), Gaps = 28/171 (16%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTD 483
C NC H C K C LC H ++C Q + + +E+ D D
Sbjct: 51 VCDNCKTRGHLRRNCPTIK----CNLCKRLGHFRRDCPQDASKRV-RSAENAPCDDVNLD 105
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS 543
+ S C CG S H ++C Y A ++CY C GH+ + Q
Sbjct: 106 EEYRWS--VCRNCGSSRHIQANCPVRYQA-----LECYQCHQLGHM------MTTCPQTR 152
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRL 594
CYNCG GH C S C++C GH + C K RL
Sbjct: 153 CYNCGTFGHSSQIC----------HSKPHCFQCSHSGHRSSECPMRSKGRL 193
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 41/159 (25%)
Query: 420 WNSETCSNCGKENHTAATCKMQKQ------------------NKPCFLCGSFKHRWKNCK 461
W+ C NCG H A C ++ Q C+ CG+F H + C
Sbjct: 110 WS--VCRNCGSSRHIQANCPVRYQALECYQCHQLGHMMTTCPQTRCYNCGTFGHSSQICH 167
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADDLKKIQC 520
CF S H +S+CP +G C +C + GH+ ++C +G+ C
Sbjct: 168 SKPHCFQCSHSGHRSSECPMRSKG-----RLCYQCNEPGHEAANCPQGQL---------C 213
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
+C GH + +V C C GH C N
Sbjct: 214 RMCHRPGHF------VARCPEVVCNLCHVKGHTAGVCDN 246
>gi|240849635|ref|NP_001155824.1| Zinc finger, CCHC domain containing 9-like [Acyrthosiphon pisum]
gi|239787929|dbj|BAH70666.1| ACYPI009958 [Acyrthosiphon pisum]
Length = 263
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF + H+ + CP + G N + C +CG + H L C + D L +C+IC
Sbjct: 117 CFHCRQPGHMLNQCP--ELGTNTALGVCFKCGSTEHKLHECRNAGNNDQLDFAKCFICNE 174
Query: 526 FGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
GHL C N + +C +CG H +C
Sbjct: 175 EGHLSRQCPDNPMGLYPNGGACRSCGDVTHFAKDC 209
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 11/95 (11%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKP---CFLCGSFKHRWKNCKQGQD--------CFINKG 471
+ C +C + H C N CF CGS +H+ C+ + CFI
Sbjct: 115 KACFHCRQPGHMLNQCPELGTNTALGVCFKCGSTEHKLHECRNAGNNDQLDFAKCFICNE 174
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
HL+ CP G + C CGD H C
Sbjct: 175 EGHLSRQCPDNPMGLYPNGGACRSCGDVTHFAKDC 209
>gi|121708529|ref|XP_001272160.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
clavatus NRRL 1]
gi|119400308|gb|EAW10734.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
clavatus NRRL 1]
Length = 488
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 69/179 (38%), Gaps = 22/179 (12%)
Query: 425 CSNCGKENHTAATCK-----MQKQNKPCFLCGSFKHRWKNCKQGQ----DCFINKGSEHL 475
CSNCG+ HTA CK +++ C C + HR ++C + + C +H
Sbjct: 279 CSNCGEMGHTARGCKEERALIERVEVKCVNCNASGHRARDCPEVRRDRYACRNCGAPDHK 338
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
A+DCP + C RC + GH C C C S H+
Sbjct: 339 AADCPNPRSAEGVE---CKRCNEVGHFAKDC-----PQAPPPRTCRNCGSEDHIARDCDK 390
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRL 594
+ V+C NC + GH +C S + C CG+ GH +RC D L
Sbjct: 391 PRDVSTVTCRNCDEVGHFSRDCTKK-----KDWSKVKCNNCGEMGHTIKRCPQATSDDL 444
>gi|407925395|gb|EKG18406.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 244
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 67/191 (35%), Gaps = 38/191 (19%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG-----QDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + C+ +G H+ +D
Sbjct: 35 ACYKCGNVGHYAEVCSSSERL--CYNCKQPGHESNGCPHPRTTETKQCYHCQGLGHVQAD 92
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE--------------------YHADDLKKI 518
CP +S C CG GH SC A +
Sbjct: 93 CPTLRLSGAGTSGRCYSCGQPGHLARSCPNPAGGVGRGAGIPRGGYGGFRGGFAGGPRPA 152
Query: 519 QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---ICYK 575
CY C H + + + CY CG+ GH+ + C A NG N CY+
Sbjct: 153 TCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAGKTCYR 204
Query: 576 CGKEGHFARRC 586
CG+ GH +R C
Sbjct: 205 CGEAGHISREC 215
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 52/140 (37%), Gaps = 40/140 (28%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCE-----------------GEYHADDLKKIQCYICKSFGH 528
++LS C +CG+ GH C G H + QCY C+ GH
Sbjct: 29 SSLSRRACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPHPRTTETKQCYHCQGLGH 88
Query: 529 LC--CVNSSIIGLKQVS-CYNCGQSGHLGPECANSCEALNGKKSNL-------------- 571
+ C + G CY+CGQ GHL C N + G+ + +
Sbjct: 89 VQADCPTLRLSGAGTSGRCYSCGQPGHLARSCPNPAGGV-GRGAGIPRGGYGGFRGGFAG 147
Query: 572 -----ICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 148 GPRPATCYKCGGPNHFARDC 167
>gi|344301675|gb|EGW31980.1| zinc-finger protein GIS2 [Spathaspora passalidarum NRRL Y-27907]
Length = 173
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 30/153 (19%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H NC+Q + C+ H ++DCP Q ++ C CGD GH S
Sbjct: 9 CYKCGEVGHLADNCQQEERLCYNCHKPGHESTDCPDPKQ---PTTKQCYSCGDVGHVQSE 65
Query: 506 CEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQ----------VSCYNCGQSGHL 553
C + + +CY C FGH+ C + + G ++ +CY CG H
Sbjct: 66 CP-----NQAQGTKCYNCGQFGHISKNCDSEQVGGARKKFYPTKSAAGTTCYKCGGPNHF 120
Query: 554 GPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
A C+A + CY CGK GH ++ C
Sbjct: 121 ----ARDCQA-----GVVKCYACGKTGHISKDC 144
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 71/177 (40%), Gaps = 27/177 (15%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
TC CG+ H A C Q++ + C+ C H +C + C+ H+ S+
Sbjct: 8 TCYKCGEVGHLADNC--QQEERLCYNCHKPGHESTDCPDPKQPTTKQCYSCGDVGHVQSE 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE---------YHADDLKKIQCYICKSFGHL 529
CP QG C CG GH +C+ E Y CY C H
Sbjct: 66 CPNQAQGTK-----CYNCGQFGHISKNCDSEQVGGARKKFYPTKSAAGTTCYKCGGPNHF 120
Query: 530 CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G+ V CY CG++GH+ +C +S + + CY CGK GH ++ C
Sbjct: 121 --ARDCQAGV--VKCYACGKTGHISKDCTSS--SGGSNYGSKTCYNCGKSGHISKEC 171
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 58/145 (40%), Gaps = 20/145 (13%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
DP ++ C +CG H + C Q Q C+ CG F H KNC Q + +
Sbjct: 44 DPKQPTTKQCYSCGDVGHVQSECPNQAQGTKCYNCGQFGHISKNCDSEQ---VGGARKKF 100
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCV 532
+ + C +CG H C+ ++CY C GH+ C
Sbjct: 101 YPT-------KSAAGTTCYKCGGPNHFARDCQAGV-------VKCYACGKTGHISKDCTS 146
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPEC 557
+S +CYNCG+SGH+ EC
Sbjct: 147 SSGGSNYGSKTCYNCGKSGHISKEC 171
>gi|366986513|ref|XP_003673023.1| hypothetical protein NCAS_0A00720 [Naumovozyma castellii CBS 4309]
gi|342298886|emb|CCC66632.1| hypothetical protein NCAS_0A00720 [Naumovozyma castellii CBS 4309]
Length = 161
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 34/163 (20%)
Query: 445 KPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLS 504
K CF+CG H ++C + C+ H+ S+CP + + C CG++GH S
Sbjct: 4 KACFVCGKIGHLAEDCDSEKLCYNCNKPGHVQSECP---EPRTVEHKQCYNCGETGHVKS 60
Query: 505 SCEGEYHADDLKKIQCYICKSFGHLC--CV---------NSSIIGLKQ--VSCYNCGQSG 551
C + +CY C GH+ C N+ G + ++CY CG+
Sbjct: 61 ECTVQ---------RCYNCNQTGHISKDCPEPRKPREPRNNGRFGANRHGMTCYKCGEPN 111
Query: 552 HLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRL 594
H+ +C +S CY CGK GH +R C K+++
Sbjct: 112 HMAKDCP---------QSESKCYSCGKFGHMSRDCPDGPKEKV 145
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 22/147 (14%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NC K H + C + ++K C+ CG H C Q C+ + H++ DCP
Sbjct: 25 CYNCNKPGHVQSECPEPRTVEHKQCYNCGETGHVKSECTV-QRCYNCNQTGHISKDCPEP 83
Query: 483 DQ----------GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCV 532
+ G N C +CG+ H C + +CY C FGH+
Sbjct: 84 RKPREPRNNGRFGANRHGMTCYKCGEPNHMAKDCP-------QSESKCYSCGKFGHM--S 134
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECAN 559
G K+ CYNC ++GH+ +C N
Sbjct: 135 RDCPDGPKEKVCYNCNETGHISRDCPN 161
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 23/120 (19%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCY 545
+S C CG GH C+ E K+ CY C GH+ C + KQ CY
Sbjct: 1 MSQKACFVCGKIGHLAEDCDSE-------KL-CYNCNKPGHVQSECPEPRTVEHKQ--CY 50
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFTAER 605
NCG++GH+ EC + CY C + GH ++ C K R ++ F A R
Sbjct: 51 NCGETGHVKSEC-----------TVQRCYNCNQTGHISKDCPEPRKPREPRNNGRFGANR 99
>gi|15237136|ref|NP_200051.1| vascular-related NAC-domain 6 protein [Arabidopsis thaliana]
gi|10177404|dbj|BAB10535.1| unnamed protein product [Arabidopsis thaliana]
gi|90962970|gb|ABE02409.1| At5g52380 [Arabidopsis thaliana]
gi|332008824|gb|AED96207.1| vascular-related NAC-domain 6 protein [Arabidopsis thaliana]
Length = 268
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 447 CFLCGSFKHRWKNCKQGQD------CFINKGSEHLASDCPGTDQGNNLSS--NFCLRCGD 498
CF+C S H K C + + C + H +CP + NN SS C CGD
Sbjct: 76 CFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCP---EKNNESSEKKLCYNCGD 132
Query: 499 SGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGP 555
+GH LS C K C+ICK GH+ C N I C CG HL
Sbjct: 133 TGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPMGGCCKVCGSVAHLVK 192
Query: 556 ECAN 559
+C +
Sbjct: 193 DCPD 196
>gi|357606571|gb|EHJ65114.1| putative zinc finger protein [Danaus plexippus]
Length = 420
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKP--------CFLCGSFKHRWKNCKQGQD-------CF 467
E C NC K H + C K + P CF CGS +HR CK +D CF
Sbjct: 277 EVCYNCRKGGHNLSDCPDLKSHIPGVDSAEGVCFKCGSTEHRQFECKVQKDKEFRFATCF 336
Query: 468 INKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
I + H+A CP +G + C CGD H C
Sbjct: 337 ICREPGHIARQCPDNPKGLYPNGGSCKLCGDVTHLRKDC 375
>gi|297744732|emb|CBI37994.3| unnamed protein product [Vitis vinifera]
Length = 259
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 75/210 (35%), Gaps = 45/210 (21%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC- 479
N C NC H A+ C + C+ C H NC C + HLA DC
Sbjct: 58 NVAVCHNCSLPGHIASECTTRSL---CWNCQEPGHTASNCPNEGICHTCGKTGHLARDCS 114
Query: 480 -PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ-----------CYICKSFG 527
P G+ C C GH + C + ++ +K C +C G
Sbjct: 115 APPVPPGD---LRLCNNCYKQGHIAADCTNDKACNNCRKTGHLARDCRNDPVCNLCNVSG 171
Query: 528 HLC--CVNSSIIG----------LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
H+ C ++++G + + C NC Q GH+ +CA +IC
Sbjct: 172 HVARQCPKANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCA---------APLMICRN 222
Query: 576 CGKEGHFARRCGSN-----FKDRLRISDLL 600
CG GH A C S F RLR L
Sbjct: 223 CGGRGHMAFECPSGRFMDRFPRRLRFEPLW 252
>gi|395847274|ref|XP_003796305.1| PREDICTED: cellular nucleic acid-binding protein [Otolemur
garnettii]
Length = 185
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 20/110 (18%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ-----------CYICKSFGHLCCVNSSI 536
+SSN C +CG SGH C + + CY C GHL +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHL----AKD 56
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 CDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 101
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 55/133 (41%), Gaps = 26/133 (19%)
Query: 465 DCFINKGSEHLASDCPGTDQGNNLSS-----------NFCLRCGDSGHDLSSCEGEYHAD 513
+CF S H A +CP + C RCG+SGH C
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDC------- 57
Query: 514 DLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLIC 573
DL++ CY C GH+ ++ CYNCG+ GHL A C+ + +K C
Sbjct: 58 DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHL----ARDCDHADEQK----C 109
Query: 574 YKCGKEGHFARRC 586
Y CG+ GH + C
Sbjct: 110 YSCGEFGHIQKDC 122
>gi|407919077|gb|EKG12332.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 495
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 115/298 (38%), Gaps = 49/298 (16%)
Query: 308 ERSVEDMGKAVQTTATITGANDGVKSV---------EMNNLYSLRLEDDKPLSDMRLGRR 358
+R ++D A++T A N+ S+ E N+Y + +E K +SD+
Sbjct: 174 DRDLDDFKTALRTYAKALKLNNVPVSLAQIEKTLRDEKRNVYLIAIE--KEVSDVMTSVN 231
Query: 359 VEDTVSVGPIVGERQQKKRRKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRYFDPP 418
E + ++G K ++K V ED E V R R P+
Sbjct: 232 FEGKLDCKYVLGFYFSDKPKRKMAVEGWPADAEDNFARLEDAGFVEDR---RVPK----- 283
Query: 419 GWNSETCSNCGKENHTAATCKMQKQ---NKP---CFLCGSFKHRWKNCKQGQ-DCFINKG 471
C NCG HT CK +++ +P C +C HR ++CKQ + + F+ +
Sbjct: 284 ------CDNCGGLGHTRRACKEEREEPAGRPEVKCMVCSELGHRARDCKQERINPFLCRN 337
Query: 472 SE---HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
+ H + DCP + C +C + GH + C + K+ C C GH
Sbjct: 338 CKQFGHNSRDCPEPRSAEGVE---CRKCHEMGHFSNDCP------NTPKMTCRNCGEEGH 388
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
S V+C NC + GH EC S + C C + GH +RC
Sbjct: 389 KASECSKPRDPSTVTCRNCDELGHFSKECPKP-----RDWSRVKCSICEEMGHGPKRC 441
>gi|294942030|ref|XP_002783361.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239895776|gb|EER15157.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 135
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 16/132 (12%)
Query: 464 QDCFINKGSEHLASDCP---GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
Q CFI + H A +CP D C CG H C + D C
Sbjct: 8 QACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDR----PC 63
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC------ANSCEALNGKKSNLICY 574
+ C+ GH +C+ CGQSGHL EC ++ G C+
Sbjct: 64 FKCQQVGHFA---RDCPSADTRNCFRCGQSGHLARECPNEENNQDNNNNNRGGGGGRNCF 120
Query: 575 KCGKEGHFARRC 586
CGK GH AR C
Sbjct: 121 HCGKPGHLARNC 132
Score = 48.9 bits (115), Expect = 0.007, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 56/151 (37%), Gaps = 34/151 (22%)
Query: 422 SETCSNCGKENHTAATCKMQ--------KQNKPCFLCGSFKHRWKNCKQGQD----CFIN 469
S+ C C + H A C Q ++ + C+ CG H ++C + Q CF
Sbjct: 7 SQACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDRPCFKC 66
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
+ H A DCP D N C RCG SGH C E + D
Sbjct: 67 QQVGHFARDCPSADTRN------CFRCGQSGHLARECPNEENNQDNNNNNRGGGGG---- 116
Query: 530 CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++CG+ GHL C NS
Sbjct: 117 ------------RNCFHCGKPGHLARNCRNS 135
Score = 41.6 bits (96), Expect = 1.3, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 12/75 (16%)
Query: 520 CYICKSFGHLC--CV----NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLIC 573
C+IC GH C + S + +CYNCGQ HL +C + ++ C
Sbjct: 10 CFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKD------QSNDRPC 63
Query: 574 YKCGKEGHFARRCGS 588
+KC + GHFAR C S
Sbjct: 64 FKCQQVGHFARDCPS 78
>gi|225427758|ref|XP_002267480.1| PREDICTED: zinc finger protein GIS2-like isoform 1 [Vitis vinifera]
Length = 258
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 78/212 (36%), Gaps = 41/212 (19%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
++P ++ N C NC H A+ C + C+ C H NC C
Sbjct: 58 CKRPGHYARECPNVAVCHNCSLPGHIASECTTRSL---CWNCQEPGHTASNCPNEGICHT 114
Query: 469 NKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ------- 519
+ HLA DC P G+ C C GH + C + ++ +K
Sbjct: 115 CGKTGHLARDCSAPPVPPGD---LRLCNNCYKQGHIAADCTNDKACNNCRKTGHLARDCR 171
Query: 520 ----CYICKSFGHLC--CVNSSIIG----------LKQVSCYNCGQSGHLGPECANSCEA 563
C +C GH+ C ++++G + + C NC Q GH+ +CA
Sbjct: 172 NDPVCNLCNVSGHVARQCPKANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCA----- 226
Query: 564 LNGKKSNLICYKCGKEGHFARRCGSN-FKDRL 594
+IC CG GH A C S F DR
Sbjct: 227 ----APLMICRNCGGRGHMAFECPSGRFMDRF 254
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 54/147 (36%), Gaps = 30/147 (20%)
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLS-----------SNFCLRCGDSGHDLSSCEGEY 510
QG C K H A +CP +N S + C C + GH S+C E
Sbjct: 51 QGNLCKNCKRPGHYARECPNVAVCHNCSLPGHIASECTTRSLCWNCQEPGHTASNCPNEG 110
Query: 511 HADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKK 568
C+ C GHL C + C NC + GH+ +C N N +K
Sbjct: 111 --------ICHTCGKTGHLARDCSAPPVPPGDLRLCNNCYKQGHIAADCTNDKACNNCRK 162
Query: 569 S---------NLICYKCGKEGHFARRC 586
+ + +C C GH AR+C
Sbjct: 163 TGHLARDCRNDPVCNLCNVSGHVARQC 189
>gi|241955521|ref|XP_002420481.1| zinc finger protein, putative [Candida dubliniensis CD36]
gi|223643823|emb|CAX41560.1| zinc finger protein, putative [Candida dubliniensis CD36]
Length = 175
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 69/188 (36%), Gaps = 29/188 (15%)
Query: 378 RKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRY-----FDPPGWNSETCSNCGKEN 432
R + E +D ++E YN KP + DP ++ C +CG
Sbjct: 7 RTCYKCGEVGHLADDCQQEERLCYN------CHKPGHESNDCPDPKQNTAKQCYSCGDVG 60
Query: 433 HTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNF 492
H C Q Q C+ CG F H KNC ++H S S
Sbjct: 61 HIQTECPNQAQGAKCYNCGQFGHISKNCDAAPS-----STDHAPSF---KRSSGRASGTT 112
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQ 549
C +CG H C+ ++CY C GH+ C + +CYNCG+
Sbjct: 113 CYKCGGPNHFARDCQ-------ANTVKCYACGKVGHISKDCHSAAGGSNFSAKTCYNCGK 165
Query: 550 SGHLGPEC 557
SGH+ EC
Sbjct: 166 SGHISKEC 173
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 71/179 (39%), Gaps = 29/179 (16%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
TC CG+ H A C Q++ + C+ C H +C + C+ H+ ++
Sbjct: 8 TCYKCGEVGHLADDC--QQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTE 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEY----HADDLKK-------IQCYICKSFG 527
CP QG C CG GH +C+ HA K+ CY C
Sbjct: 66 CPNQAQGAK-----CYNCGQFGHISKNCDAAPSSTDHAPSFKRSSGRASGTTCYKCGGPN 120
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H + V CY CG+ GH+ +C ++ A S CY CGK GH ++ C
Sbjct: 121 HF----ARDCQANTVKCYACGKVGHISKDCHSA--AGGSNFSAKTCYNCGKSGHISKEC 173
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 60/153 (39%), Gaps = 42/153 (27%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H +C+Q + C+ H ++DCP Q ++ C CGD GH +
Sbjct: 9 CYKCGEVGHLADDCQQEERLCYNCHKPGHESNDCPDPKQN---TAKQCYSCGDVGHIQTE 65
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC-------- 557
C + + CYNCGQ GH+ C
Sbjct: 66 CPNQ-----------------------------AQGAKCYNCGQFGHISKNCDAAPSSTD 96
Query: 558 -ANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
A S + +G+ S CYKCG HFAR C +N
Sbjct: 97 HAPSFKRSSGRASGTTCYKCGGPNHFARDCQAN 129
>gi|26452133|dbj|BAC43155.1| unknown protein [Arabidopsis thaliana]
Length = 268
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 447 CFLCGSFKHRWKNCKQGQD------CFINKGSEHLASDCPGTDQGNNLSS--NFCLRCGD 498
CF+C S H K C + + C + H +CP + NN SS C CGD
Sbjct: 76 CFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCP---EKNNESSERKLCYNCGD 132
Query: 499 SGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGP 555
+GH LS C K C+ICK GH+ C N I C CG HL
Sbjct: 133 TGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPMGGCCKVCGSVAHLVK 192
Query: 556 ECAN 559
+C +
Sbjct: 193 DCPD 196
>gi|401626485|gb|EJS44430.1| air2p [Saccharomyces arboricola H-6]
Length = 344
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 30/135 (22%)
Query: 440 MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDS 499
++K + C C H K+C + +H + CP + C +CG+
Sbjct: 56 IKKAARKCVNCFERGHLKKHCPHILCSYCGTADDHYSKHCPKAIK--------CSKCGEV 107
Query: 500 GHDLSSCEGEYHADDLKKIQCYICKSFGHL---C--------------CVNSSIIGLKQV 542
GH S C ++ KIQC +CKS HL C S ++ +
Sbjct: 108 GHYGSQCPHKW-----NKIQCTLCKSEKHLKERCPSIWRAYILVDDSKMAKSKVLPFHTI 162
Query: 543 SCYNCGQSGHLGPEC 557
CYNCG+ GH G +C
Sbjct: 163 YCYNCGEKGHFGDDC 177
>gi|326663946|ref|XP_001332542.4| PREDICTED: zinc finger CCHC domain-containing protein 7 [Danio
rerio]
Length = 691
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 20/141 (14%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPG 481
S TC NC K H + C K+ C LCG H + C + C H + DC
Sbjct: 337 SITCRNCNKTGHLSKNCPTLKKVPCCSLCGLRGHLLRTCP-NRHCSNCSLPGHTSDDC-- 393
Query: 482 TDQGNNLSSNF----CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
L F C RCG +GH + +C + L I KS C
Sbjct: 394 ------LERAFWYKRCHRCGMTGHFIDACPQIWRQYHLTTTAGPIRKSADPKAC------ 441
Query: 538 GLKQVSCYNCGQSGHLGPECA 558
K+ CYNC + GH G +C+
Sbjct: 442 -QKRAYCYNCSRKGHFGHQCS 461
>gi|156044332|ref|XP_001588722.1| hypothetical protein SS1G_10269 [Sclerotinia sclerotiorum 1980]
gi|154694658|gb|EDN94396.1| hypothetical protein SS1G_10269 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 794
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 22/124 (17%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C +CGS H C +HL CP T + C +C H S C
Sbjct: 503 CLVCGSSGHDRALCPDSACSSCGSTGDHLTPACPRT--------SVCGKCRGVDHQTSHC 554
Query: 507 EGEYHADDLKKIQCYICKSFGHL-----CCVNSSIIGLKQ--------VSCYNCGQSGHL 553
+ A + +C +C+S HL S + G+++ V CY CG++GH
Sbjct: 555 PEKLRAAK-EDTKCIMCQSPSHLENQCHLIWRSFLPGIEEIKKVRNISVYCYFCGRAGHF 613
Query: 554 GPEC 557
GPEC
Sbjct: 614 GPEC 617
>gi|332224858|ref|XP_003261585.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 3
[Nomascus leucogenys]
Length = 327
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 181 KNAMVCFHCRKAGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 240
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 241 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 285
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 182 NAMVCFHCRKAGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 241
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 242 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 282
>gi|343416638|emb|CCD20307.1| hypothetical protein, conserved in T. vivax, (fragment)
[Trypanosoma vivax Y486]
Length = 241
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 23/133 (17%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C C + H C + CF CG F H + C CF H +++CP D
Sbjct: 78 CFQCHQNGHMMPMCPRTR----CFNCGHFGHSSQLCASKSVCFHCSMPGHTSTECPRKDM 133
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSC 544
G C RC + GHD++ C + QC++ GHL + +V C
Sbjct: 134 G-----RLCYRCKEPGHDMAKCP--------QSPQCHMWDQTGHL------VAQCPEVLC 174
Query: 545 YNCGQSGHLGPEC 557
C Q GH+ C
Sbjct: 175 NRCHQKGHMASTC 187
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 66/173 (38%), Gaps = 40/173 (23%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLC---GSFK----HRWKNCKQGQD---CFINKGSE 473
TC NC H C + K C C G FK HR K + D C S
Sbjct: 8 TCKNCFSTGHLRRDCPLIK----CAACSRLGHFKEDCPHRRKRPRPDSDIGICRSCGSSS 63
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H + CP + S C +C +GH + C + +C+ C FGH +
Sbjct: 64 HAQAKCP-----ERIKSVECFQCHQNGHMMPMCP---------RTRCFNCGHFGH----S 105
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
S + K V C++C GH EC K +CY+C + GH +C
Sbjct: 106 SQLCASKSV-CFHCSMPGHTSTECPR-------KDMGRLCYRCKEPGHDMAKC 150
>gi|332224854|ref|XP_003261583.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 1
[Nomascus leucogenys]
gi|332224856|ref|XP_003261584.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Nomascus leucogenys]
Length = 271
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKAGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKAGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
>gi|343417616|emb|CCD19979.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 278
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 63/167 (37%), Gaps = 38/167 (22%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCG------------------SFKHRWKNCKQGQDC 466
C +CG N A C +K++ CF C F H + C + C
Sbjct: 56 CRSCGSSNRAQAKCPERKKSVECFQCHQKGHMMPMCPQTRCFNCDHFGHSSQLCGSKEVC 115
Query: 467 FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSF 526
F H +++CP D G C RC + GHD + C + QC++C
Sbjct: 116 FHCSMPWHTSTECPRKDMG-----RLCYRCKEPGHDEAKCP--------QIPQCHMCNQT 162
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANS-CEALNGKKSNLI 572
HL + +V C C Q GH+ C S C G S++I
Sbjct: 163 AHL------VAQCPEVLCNRCHQKGHMAIACKMSPCSTDGGSHSSII 203
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 21/94 (22%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +C GH + C + +C+ C FGH +S + G K+V C++C H
Sbjct: 78 CFQCHQKGHMMPMCP---------QTRCFNCDHFGH----SSQLCGSKEV-CFHCSMPWH 123
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
EC K +CY+C + GH +C
Sbjct: 124 TSTECPR-------KDMGRLCYRCKEPGHDEAKC 150
>gi|307198051|gb|EFN79104.1| Cellular nucleic acid-binding protein [Harpegnathos saltator]
Length = 154
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 60/142 (42%), Gaps = 40/142 (28%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
CF C F H + CK+ QD C+ G H+A DC QG LS C C +GH S
Sbjct: 45 CFKCNQFGHFARECKEDQDLCYRCNGVGHIAKDC---QQGPELS---CYNCNKTGHMARS 98
Query: 506 C-EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEAL 564
C EG +D + SCYNC ++GH+ A +C
Sbjct: 99 CPEG---GNDSGR---------------------FAMQSCYNCNKTGHI----ARNCTEA 130
Query: 565 NGKKSNLICYKCGKEGHFARRC 586
GK CY CGK GH +R C
Sbjct: 131 GGK----TCYICGKTGHISREC 148
>gi|307183595|gb|EFN70327.1| Cellular nucleic acid-binding protein [Camponotus floridanus]
Length = 154
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 60/142 (42%), Gaps = 40/142 (28%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
CF C F H + CK+ QD C+ G H+A DC QG LS C C +GH S
Sbjct: 45 CFKCNQFGHFARECKEDQDLCYRCNGVGHIAKDC---QQGPELS---CYNCNKTGHMARS 98
Query: 506 C-EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEAL 564
C EG +D + SCYNC ++GH+ A +C
Sbjct: 99 CPEG---GNDSGR---------------------FAMQSCYNCNKTGHI----ARNCTEA 130
Query: 565 NGKKSNLICYKCGKEGHFARRC 586
GK CY CGK GH +R C
Sbjct: 131 GGK----TCYICGKTGHISREC 148
>gi|156230672|gb|AAI52526.1| Zcchc7l protein [Danio rerio]
Length = 539
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 20/141 (14%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPG 481
S TC NC K H + C K+ C LCG H + C + C H + DC
Sbjct: 276 SITCRNCNKTGHLSKNCPTLKKVPCCSLCGLRGHLLRTCP-NRHCSNCSLPGHTSDDC-- 332
Query: 482 TDQGNNLSSNF----CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
L F C RCG +GH + +C + L I KS C
Sbjct: 333 ------LERAFWYKRCHRCGMTGHFIDACPQIWRQYHLTTTAGPIRKSADPKAC------ 380
Query: 538 GLKQVSCYNCGQSGHLGPECA 558
K+ CYNC + GH G +C+
Sbjct: 381 -QKRAYCYNCSRKGHFGHQCS 400
>gi|242032467|ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
gi|241917482|gb|EER90626.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
Length = 258
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 73/180 (40%), Gaps = 21/180 (11%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
R+P +F ++ TC+NC H AA C Q C+ C H CK C
Sbjct: 66 CRRPGHFAKECPSAPTCNNCNLPGHFAAECTSQTI---CWNCKESGHIASECKNEALCHT 122
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
+ HLA DCP G N+ C +C GH C E ++ C+ GH
Sbjct: 123 CNKTGHLARDCP--TSGANVK--LCNKCFKPGHFAVDCTNERACNN--------CRQPGH 170
Query: 529 LC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ C N + L VS G + P+ + E G +++C CG+ GH +R C
Sbjct: 171 IARECKNDPVCNLCNVS----GHVARVCPKTTLASEIQGGPFRDILCRICGQPGHISRNC 226
>gi|24658883|ref|NP_611739.1| CG3800, isoform A [Drosophila melanogaster]
gi|320544295|ref|NP_001188992.1| CG3800, isoform B [Drosophila melanogaster]
gi|74866354|sp|Q8T8R1.1|Y3800_DROME RecName: Full=CCHC-type zinc finger protein CG3800
gi|18447272|gb|AAL68216.1| GM14667p [Drosophila melanogaster]
gi|21428610|gb|AAM49965.1| LD48005p [Drosophila melanogaster]
gi|23240122|gb|AAN16117.1| CG3800, isoform A [Drosophila melanogaster]
gi|220944564|gb|ACL84825.1| CG3800-PA [synthetic construct]
gi|220954442|gb|ACL89764.1| CG3800-PA [synthetic construct]
gi|318068677|gb|ADV37238.1| CG3800, isoform B [Drosophila melanogaster]
Length = 165
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 440 MQKQNKPCFLCGSFKHRWKNC-KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGD 498
M++ + C+ C F H + C ++ + C+ G H++ DC Q +N + C RC
Sbjct: 50 MRRNREKCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC---TQADNPT---CYRCNK 103
Query: 499 SGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+GH + +C + + CY C GH+ S +CY CG+SGHL EC
Sbjct: 104 TGHWVRNCPEAVNERGPTNVSCYKCNRTGHI----SKNCPETSKTCYGCGKSGHLRREC 158
>gi|224134074|ref|XP_002327749.1| predicted protein [Populus trichocarpa]
gi|222836834|gb|EEE75227.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQS 550
C +CG+SGH C CY C FGH+ C S +CYNCG
Sbjct: 146 CYKCGNSGHFAREC-----TKGNNNNGCYSCGGFGHVARDCPGGS------GACYNCGGH 194
Query: 551 GHLGPECANSCEALNGKKSNL---ICYKCGKEGHFARRC 586
GHL +C ++ + G+ + C+ CGK+GHFAR C
Sbjct: 195 GHLARDCTSARGSGGGRFGSGNTGGCFNCGKDGHFARDC 233
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGT- 482
C CG H A C N C+ CG F H ++C G C+ G HLA DC
Sbjct: 146 CYKCGNSGHFARECTKGNNNNGCYSCGGFGHVARDCPGGSGACYNCGGHGHLARDCTSAR 205
Query: 483 ----DQGNNLSSNFCLRCGDSGHDLSSC 506
+ + ++ C CG GH C
Sbjct: 206 GSGGGRFGSGNTGGCFNCGKDGHFARDC 233
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 37/114 (32%), Gaps = 23/114 (20%)
Query: 487 NLSSNFCLRCGDSGHDLSSCEGEYHADDLKK------------IQCYICKSFGHLCCVNS 534
N + C CG+ GH C CY C + GH
Sbjct: 101 NTNGGGCFNCGNPGHIARECNNNSSKSYNYNNNNNRTGGGGGDFGCYKCGNSGHF--ARE 158
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
G CY+CG GH+ +C A CY CG GH AR C S
Sbjct: 159 CTKGNNNNGCYSCGGFGHVARDCPGGSGA---------CYNCGGHGHLARDCTS 203
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 48/157 (30%), Gaps = 46/157 (29%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNK-----------------PCFLCGSFKHRWKNCKQG 463
N C NCG H A C C+ CG+ H + C +G
Sbjct: 103 NGGGCFNCGNPGHIARECNNNSSKSYNYNNNNNRTGGGGGDFGCYKCGNSGHFARECTKG 162
Query: 464 QD---CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
+ C+ G H+A DCPG S C CG GH C + +
Sbjct: 163 NNNNGCYSCGGFGHVARDCPG-------GSGACYNCGGHGHLARDCTSARGSGGGRFGS- 214
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
C+NCG+ GH +C
Sbjct: 215 ------------------GNTGGCFNCGKDGHFARDC 233
>gi|321259015|ref|XP_003194228.1| DNA-binding protein hexbp [Cryptococcus gattii WM276]
gi|317460699|gb|ADV22441.1| DNA-binding protein hexbp, putative [Cryptococcus gattii WM276]
Length = 200
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 70/192 (36%), Gaps = 39/192 (20%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD--CFINKGSEHLASDCPG 481
+C CG++ H AA C + C+ CG H + C Q ++ C+ HL+S CP
Sbjct: 9 SCFKCGQQGHVAAACPAEAPT--CYNCGLSGHLSRECPQPKNKACYTCGQEGHLSSACPQ 66
Query: 482 TDQGNNLSSNF----CLRCGDSGHDLSSCE--GEYHADDLKKI--------------QCY 521
C RCG GH C G+ A CY
Sbjct: 67 GPGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAGGYGYAGGAGFGNKSCY 126
Query: 522 ICKSFGHL---CCVNSSIIGLKQVS----CYNCGQSGHLGPECANSCEALNGKKSNLICY 574
C GH+ C +S CYNCGQ GH+ EC ++ CY
Sbjct: 127 TCGGVGHISRECPSGASRGFGGGFGGPRKCYNCGQDGHISRECP--------QEQGKTCY 178
Query: 575 KCGKEGHFARRC 586
CG+ GH A C
Sbjct: 179 SCGQPGHIASAC 190
>gi|117647247|ref|NP_663428.2| zinc finger CCHC domain-containing protein 9 [Mus musculus]
Length = 271
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 19/159 (11%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H++S C +
Sbjct: 125 KNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
+C++C GHL C N+ + SC CG H +C N +I
Sbjct: 185 KCFVCGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDCRE-----NQNSDRIITV- 238
Query: 576 CGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFV 614
G +A+ ++++D L + L ++P T+ V
Sbjct: 239 ----GRWAKGMSADYEDVLDVPKL----QKPKTKVPKVV 269
>gi|402077716|gb|EJT73065.1| zinc knuckle domain-containing protein, variant [Gaeumannomyces
graminis var. tritici R3-111a-1]
gi|402077717|gb|EJT73066.1| zinc knuckle domain-containing protein [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 206
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 77/204 (37%), Gaps = 51/204 (25%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD----CFINKGSEHLASDC 479
C CG+ NH A C + K C+ CG H ++C +GQ C+ H++ DC
Sbjct: 16 ACYTCGQPNHQARDCPNRGAAK-CYNCGGEGHISRDCPEGQKEQKICYRCSQPGHISRDC 74
Query: 480 PGTDQGNNL----------SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ---------- 519
P + G S C +CG+ GH +C
Sbjct: 75 PQSGGGGGGGGGGGGGGGQSGAECYKCGEVGHIARNCSKAAGYGGGGGGGYGGGGGYSGG 134
Query: 520 ------------CYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
CY C GH+ CVN S CYNCG++GH +C +
Sbjct: 135 GGSYGGGGGGKTCYSCGGIGHMSRDCVNGS-------KCYNCGETGHFSRDCPKG--SST 185
Query: 566 GKKSNLICYKCGKEGHFARRCGSN 589
G+K ICYKC + GH C SN
Sbjct: 186 GEK---ICYKCQQPGHVQAECPSN 206
>gi|431907878|gb|ELK11485.1| Zinc finger CCHC domain-containing protein 9 [Pteropus alecto]
Length = 271
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRQPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + SC CG H +C S
Sbjct: 185 KCFVCGEMGHLSRACPDNPKGLYADGGSCRLCGSVEHFKKDCPQS 229
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 41/113 (36%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C + H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRQPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C +D + +
Sbjct: 186 CFVCGEMGHLSRACPDNPKGLYADGGSCRLCGSVEHFKKDCPQSQSSDRMVTV 238
>gi|57648427|gb|AAW55908.1| zinc finger protein 7 [Trypanosoma cruzi]
Length = 101
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVS---CYNC 547
C CG GH C + CY C GHL C N G + V+ CY+C
Sbjct: 6 CYNCGRMGHLSRECPTR-PPGAMGDRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHC 64
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
Q GHL +C N+ G+++ CY CG+ GH +R C
Sbjct: 65 QQEGHLARDCPNAPPG--GERA---CYNCGQTGHISRAC 98
Score = 44.7 bits (104), Expect = 0.15, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GHL EC G ++ CY CG+ GH +R C
Sbjct: 5 ACYNCGRMGHLSRECPTRPPGAMGDRA---CYNCGRMGHLSREC 45
Score = 40.0 bits (92), Expect = 4.0, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 425 CSNCGKENHTAATCKMQKQ----NKPCFLCGSFKHRWKNCKQGQD----------CFINK 470
C NCG+ H + C + ++ C+ CG H + C C+ +
Sbjct: 6 CYNCGRMGHLSRECPTRPPGAMGDRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQ 65
Query: 471 GSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
HLA DCP G + C CG +GH +C
Sbjct: 66 QEGHLARDCPNAPPGGERA---CYNCGQTGHISRAC 98
>gi|47117592|sp|Q8R1J3.1|ZCHC9_MOUSE RecName: Full=Zinc finger CCHC domain-containing protein 9
gi|19353581|gb|AAH24496.1| Zinc finger, CCHC domain containing 9 [Mus musculus]
Length = 273
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 19/159 (11%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H++S C +
Sbjct: 125 KNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
+C++C GHL C N+ + SC CG H +C N +I
Sbjct: 185 KCFVCGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDCRE-----NQNSDRIITV- 238
Query: 576 CGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFV 614
G +A+ ++++D L + L ++P T+ V
Sbjct: 239 ----GRWAKGMSADYEDVLDVPKL----QKPKTKVPKVV 269
>gi|118401479|ref|XP_001033060.1| Zinc knuckle family protein [Tetrahymena thermophila]
gi|89287406|gb|EAR85397.1| Zinc knuckle family protein [Tetrahymena thermophila SB210]
Length = 352
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 425 CSNCGKENHTAATCKMQKQNKP----CFLCGSFKHRWKNCKQGQD-------CFINKGSE 473
C C + H A C K +K C+ CGS +H K+CK+ + CF+ +
Sbjct: 216 CLGCREVGHLVADCPNAKSSKAKQNICYNCGSNEHTLKDCKKKKTGALKFAFCFVCQKQG 275
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
H++ DCP D+G C CGD H ++C
Sbjct: 276 HISRDCPENDKGLYYKGGGCFICGDVHHTQANC 308
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 518 IQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
+QC C+ GHL C N+ KQ CYNCG + H +C + G C+
Sbjct: 214 LQCLGCREVGHLVADCPNAKSSKAKQNICYNCGSNEHTLKDCK---KKKTGALKFAFCFV 270
Query: 576 CGKEGHFARRCGSNFK 591
C K+GH +R C N K
Sbjct: 271 CQKQGHISRDCPENDK 286
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---C 530
HL +DCP + + N C CG + H L C+ + LK C++C+ GH+ C
Sbjct: 224 HLVADCPNA-KSSKAKQNICYNCGSNEHTLKDCKKK-KTGALKFAFCFVCQKQGHISRDC 281
Query: 531 CVNSSIIGLKQVSCYNCGQSGHLGPECA-NSCEALNGKKSNL 571
N + K C+ CG H C N +L K+ +
Sbjct: 282 PENDKGLYYKGGGCFICGDVHHTQANCPKNPVNSLKAKQDDF 323
>gi|67537882|ref|XP_662715.1| hypothetical protein AN5111.2 [Aspergillus nidulans FGSC A4]
gi|40743102|gb|EAA62292.1| hypothetical protein AN5111.2 [Aspergillus nidulans FGSC A4]
Length = 176
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 72/186 (38%), Gaps = 41/186 (22%)
Query: 416 DPPGWNSETCSNCG-----KENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
D P + TC NCG + H + C + + K C+ CG+ H + C Q +
Sbjct: 20 DCPKKGTPTCYNCGVLDRLGQGHVSRECTVAPKEKSCYRCGAVGHISRECPQAGE----- 74
Query: 471 GSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE-------GEYHADDLKKIQCYIC 523
+E A C +CG GH +C G ++ CY C
Sbjct: 75 -NERPAG------------GQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSC 121
Query: 524 KSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
FGH+ G K CYNCG++GH+ +C K +CY+C + GH
Sbjct: 122 GGFGHM--ARDCTQGQK---CYNCGETGHVSRDCPTE------AKGERVCYQCKQPGHIQ 170
Query: 584 RRCGSN 589
C +N
Sbjct: 171 SACPNN 176
>gi|297836502|ref|XP_002886133.1| hypothetical protein ARALYDRAFT_480687 [Arabidopsis lyrata subsp.
lyrata]
gi|297331973|gb|EFH62392.1| hypothetical protein ARALYDRAFT_480687 [Arabidopsis lyrata subsp.
lyrata]
Length = 299
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 78/212 (36%), Gaps = 48/212 (22%)
Query: 421 NSETCSNCGKENHTAATC--------------KMQKQNKPCFLCGSFKHRWKNCKQGQD- 465
N +C NCG+ H A C + C++CG H ++C+Q
Sbjct: 90 NGGSCFNCGEVGHMAKDCDGGGGGRSYGGGGGRRSGGEGTCYVCGDVGHFARDCRQSGGG 149
Query: 466 ----------CFINKGSEHLASDCPGTDQGNNLSSNF-------CLRCGDSGHDLSSCE- 507
C+ HLA DC G GN C CG GH C
Sbjct: 150 NSGGGGGGGPCYSCGEVGHLAKDCRGGSGGNRYGGGGRGSGSDGCYLCGGVGHFARDCRQ 209
Query: 508 ---GEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS---CYNCGQSGHLGPEC---- 557
G CY C GH+ + + K+ S CY CG++GHL +C
Sbjct: 210 NGGGNVGGGGGGGNTCYTCGGVGHI----ARVCTSKRPSGGACYECGETGHLARDCDRRG 265
Query: 558 -ANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+S G + C+ CGKEGHFAR C S
Sbjct: 266 SGSSGGGGGGGGGSGKCFNCGKEGHFARECSS 297
>gi|302422156|ref|XP_003008908.1| cellular nucleic acid-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261352054|gb|EEY14482.1| cellular nucleic acid-binding protein [Verticillium albo-atrum
VaMs.102]
gi|346970067|gb|EGY13519.1| cellular nucleic acid-binding protein [Verticillium dahliae
VdLs.17]
Length = 189
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 71/190 (37%), Gaps = 38/190 (20%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSEHLASDC 479
TC CG H A C QK C+ CG+ H + C G + C+ H++ DC
Sbjct: 12 TCYTCGVVGHQARECP-QKGPAKCYNCGNEGHLSRECPDGPKDNKSCYRCGQPGHISRDC 70
Query: 480 PGTDQGNNLSSNF---CLRCGDSGHDLSSCE----------------GEYHADDLKKIQC 520
P + C +CG+ GH C C
Sbjct: 71 PQSGGSMGGGGGGGGECYKCGELGHMARQCPKAGGGFGGGYGGGAGGYSGGGGYGAPKTC 130
Query: 521 YICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGK 578
Y C FGH+ C N S CYNCG++GH +C G+ + ICYKC +
Sbjct: 131 YSCGGFGHMSRDCTNGS-------KCYNCGENGHFSRDCPK-----GGEGGDKICYKCQQ 178
Query: 579 EGHFARRCGS 588
GH +C S
Sbjct: 179 PGHIQSQCPS 188
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
Query: 509 EYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKK 568
+Y CY C GH CYNCG GHL EC + G K
Sbjct: 2 DYQGSAPAPRTCYTCGVVGHQ---ARECPQKGPAKCYNCGNEGHLSRECPD------GPK 52
Query: 569 SNLICYKCGKEGHFARRC 586
N CY+CG+ GH +R C
Sbjct: 53 DNKSCYRCGQPGHISRDC 70
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK-QV 542
QG+ + C CG GH C +CY C + GHL G K
Sbjct: 4 QGSAPAPRTCYTCGVVGHQARECP------QKGPAKCYNCGNEGHL--SRECPDGPKDNK 55
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLI-CYKCGKEGHFARRC 586
SCY CGQ GH+ +C S ++ G CYKCG+ GH AR+C
Sbjct: 56 SCYRCGQPGHISRDCPQSGGSMGGGGGGGGECYKCGELGHMARQC 100
>gi|294873524|ref|XP_002766658.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239867715|gb|EEQ99375.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 144
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 51/131 (38%), Gaps = 17/131 (12%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNF---CLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
CFI H A DCP + C CG H C E + C+
Sbjct: 19 CFICNEPGHFARDCPQASSSTRPTGRRPMNCYNCGKPDHLARDCPNE----QTNQRPCFK 74
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN------SCEALNGKKS-NLICYK 575
C GH +C+ CG++GHL +C N S A G+ + C+K
Sbjct: 75 CGQVGHF---ARDCTAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFK 131
Query: 576 CGKEGHFARRC 586
CG+ GHFAR C
Sbjct: 132 CGQPGHFARDC 142
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQN-KPCFLCGSFKHRWKNC--KQGQDCFINKGSE 473
P G C NCGK +H A C ++ N +PCF CG H ++C + CF +
Sbjct: 41 PTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGQVGHFARDCTAPDTRACFRCGETG 100
Query: 474 HLASDCPGTD---------QGNNLSSNFCLRCGDSGHDLSSC 506
HLA DCP D +G C +CG GH C
Sbjct: 101 HLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHFARDC 142
>gi|14150027|ref|NP_115656.1| zinc finger CCHC domain-containing protein 9 [Homo sapiens]
gi|196259803|ref|NP_001124507.1| zinc finger CCHC domain-containing protein 9 [Homo sapiens]
gi|196259805|ref|NP_001124508.1| zinc finger CCHC domain-containing protein 9 [Homo sapiens]
gi|426349360|ref|XP_004042275.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 1
[Gorilla gorilla gorilla]
gi|426349362|ref|XP_004042276.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Gorilla gorilla gorilla]
gi|426349364|ref|XP_004042277.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 3
[Gorilla gorilla gorilla]
gi|116242852|sp|Q8N567.2|ZCHC9_HUMAN RecName: Full=Zinc finger CCHC domain-containing protein 9
gi|12224957|emb|CAC21654.1| hypothetical protein [Homo sapiens]
gi|119616276|gb|EAW95870.1| zinc finger, CCHC domain containing 9, isoform CRA_a [Homo sapiens]
gi|119616277|gb|EAW95871.1| zinc finger, CCHC domain containing 9, isoform CRA_a [Homo sapiens]
gi|119616279|gb|EAW95873.1| zinc finger, CCHC domain containing 9, isoform CRA_a [Homo sapiens]
gi|189054324|dbj|BAG36844.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
>gi|405120721|gb|AFR95491.1| DNA-binding protein hexbp [Cryptococcus neoformans var. grubii H99]
Length = 201
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 70/193 (36%), Gaps = 40/193 (20%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD--CFINKGSEHLASDCPG 481
+C CG++ H AA C + C+ CG H + C Q ++ C+ HL+S CP
Sbjct: 9 SCFKCGQQGHVAAACPAEAPT--CYNCGLSGHLSRECPQPKNKACYTCGQEGHLSSACPQ 66
Query: 482 TDQGNNLSSNF----CLRCGDSGHDLSSCE--GEYHADDLKKI---------------QC 520
C RCG GH C G+ A C
Sbjct: 67 GPGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAGGYGGYGGGAGFGNKSC 126
Query: 521 YICKSFGHL---CCVNSSIIGLKQVS----CYNCGQSGHLGPECANSCEALNGKKSNLIC 573
Y C GH+ C +S CYNCGQ GH+ EC ++ C
Sbjct: 127 YTCGGVGHISRECPSGASRGFGGGFGGPRKCYNCGQDGHISRECP--------QEQGKTC 178
Query: 574 YKCGKEGHFARRC 586
Y CG+ GH A C
Sbjct: 179 YSCGQPGHIASAC 191
>gi|221222214|gb|ACM09768.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 143
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 61/165 (36%), Gaps = 46/165 (27%)
Query: 440 MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDS 499
M+ + CF CG H KNC + A FC RCG+
Sbjct: 1 MEMSSSECFRCGRPGHWIKNCPE-------------AGGRGRGRGRGRGKDLFCYRCGEQ 47
Query: 500 GHDLSSCEGEYHADDLKKIQCYICKSFGHL-------------CCVNSSIIGLKQ----- 541
GH CE +D CY C GH+ CC + G Q
Sbjct: 48 GHIARDCE---QTEDA----CYNCHRSGHISRDCKEPKKEREQCCYSCGKAGHIQKLCDK 100
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
V CY CG+ GH+ +C+ K S + CYKCG GH A+ C
Sbjct: 101 VKCYRCGEIGHVAVQCS--------KASEVNCYKCGNTGHLAKEC 137
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 38/134 (28%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTD 483
C CG++ H A ++C+Q +D C+ S H++ DC
Sbjct: 41 CYRCGEQGHIA----------------------RDCEQTEDACYNCHRSGHISRDC---K 75
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS 543
+ C CG +GH C+ K++CY C GH V +V+
Sbjct: 76 EPKKEREQCCYSCGKAGHIQKLCD---------KVKCYRCGEIGH---VAVQCSKASEVN 123
Query: 544 CYNCGQSGHLGPEC 557
CY CG +GHL EC
Sbjct: 124 CYKCGNTGHLAKEC 137
>gi|294882220|ref|XP_002769652.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239873234|gb|EER02370.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 144
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 52/131 (39%), Gaps = 17/131 (12%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNF---CLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
CFI H A DCP + + C CG H C E + C+
Sbjct: 19 CFICNEPGHFARDCPQATSSSRPTGRRPMNCYNCGKPDHLARDCPNE----QTNQRPCFK 74
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN------SCEALNGKKS-NLICYK 575
C GH +C+ CG++GHL +C N S A G+ + C+K
Sbjct: 75 CGQVGHF---ARDCTAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFK 131
Query: 576 CGKEGHFARRC 586
CG+ GHFAR C
Sbjct: 132 CGQPGHFARDC 142
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQN-KPCFLCGSFKHRWKNC--KQGQDCFINKGSE 473
P G C NCGK +H A C ++ N +PCF CG H ++C + CF +
Sbjct: 41 PTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGQVGHFARDCTAPDTRACFRCGETG 100
Query: 474 HLASDCPGTD---------QGNNLSSNFCLRCGDSGHDLSSC 506
HLA DCP D +G C +CG GH C
Sbjct: 101 HLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHFARDC 142
>gi|146104178|ref|XP_001469751.1| universal minicircle sequence binding protein [Leishmania infantum
JPCM5]
gi|134074121|emb|CAM72863.1| universal minicircle sequence binding protein [Leishmania infantum
JPCM5]
Length = 115
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ CP + C CG++GH C E K CY C S
Sbjct: 6 CYKCGEAGHMSRSCP-----RAAVTRSCYNCGETGHMSRDCPSE-----RKPKSCYNCGS 55
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G SCYNCG +GH+ +C N ++ CY CG H +
Sbjct: 56 TDHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPN-------ERKPKSCYNCGSTDHLS 108
Query: 584 RRC 586
R C
Sbjct: 109 REC 111
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNC 547
+S+ C +CG++GH SC CY C GH+ K SCYNC
Sbjct: 1 MSAITCYKCGEAGHMSRSCP-----RAAVTRSCYNCGETGHM--SRDCPSERKPKSCYNC 53
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + HL EC N +A +S CY CG GH +R C
Sbjct: 54 GSTDHLSRECTNEAKAGADTRS---CYNCGGTGHMSRDC 89
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQD---CFINKGSEH 474
+ +C NCG+ H + C +++ K C+ CGS H + C K G D C+ G+ H
Sbjct: 25 TRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNCGGTGH 84
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGH 501
++ DCP N C CG + H
Sbjct: 85 MSRDCP-----NERKPKSCYNCGSTDH 106
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 33/139 (23%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASDCP 480
TC CG+ H + +C + C+ CG H ++C ++ + C+ ++HL+ +C
Sbjct: 5 TCYKCGEAGHMSRSCPRAAVTRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRECT 64
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+ + C CG +GH C E K
Sbjct: 65 NEAKA-GADTRSCYNCGGTGHMSRDCPNE-----------------------------RK 94
Query: 541 QVSCYNCGQSGHLGPECAN 559
SCYNCG + HL EC +
Sbjct: 95 PKSCYNCGSTDHLSRECPD 113
>gi|21595704|gb|AAH32736.1| ZCCHC9 protein [Homo sapiens]
Length = 271
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
>gi|401420034|ref|XP_003874506.1| universal minicircle sequence binding protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322490742|emb|CBZ26006.1| universal minicircle sequence binding protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 115
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ CP ++ C CG++GH C E K CY C S
Sbjct: 6 CYKCGEAGHMSRSCP-----RAAATRSCYNCGETGHLSRDCPSE-----RKPKSCYNCGS 55
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G SCYNCG +GH+ +C N ++ CY CG H +
Sbjct: 56 TEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPN-------ERKPKSCYNCGSTEHLS 108
Query: 584 RRC 586
R C
Sbjct: 109 REC 111
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNC 547
+S+ C +CG++GH SC CY C GHL K SCYNC
Sbjct: 1 MSAITCYKCGEAGHMSRSC-----PRAAATRSCYNCGETGHL--SRDCPSERKPKSCYNC 53
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + HL EC N EA G + CY CG GH +R C
Sbjct: 54 GSTEHLSRECTN--EAKAGADTR-SCYNCGGTGHMSRDC 89
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQD---CFIN 469
P + +C NCG+ H + C +++ K C+ CGS +H + C K G D C+
Sbjct: 20 PRAAATRSCYNCGETGHLSRDCPSERKPKSCYNCGSTEHLSRECTNEAKAGADTRSCYNC 79
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
G+ H++ DCP N C CG + H
Sbjct: 80 GGTGHMSRDCP-----NERKPKSCYNCGSTEH 106
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 33/137 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASDCP 480
TC CG+ H + +C + C+ CG H ++C ++ + C+ +EHL+ +C
Sbjct: 5 TCYKCGEAGHMSRSCPRAAATRSCYNCGETGHLSRDCPSERKPKSCYNCGSTEHLSRECT 64
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+ + C CG +GH C E K
Sbjct: 65 NEAKA-GADTRSCYNCGGTGHMSRDCPNE-----------------------------RK 94
Query: 541 QVSCYNCGQSGHLGPEC 557
SCYNCG + HL EC
Sbjct: 95 PKSCYNCGSTEHLSREC 111
>gi|194220088|ref|XP_001504692.2| PREDICTED: zinc finger CCHC domain-containing protein 9-like [Equus
caballus]
Length = 271
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + +++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGVADCPAALENHDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVAHFQKDCPES 229
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGVADCPAALENHDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD 513
CF+ HL+ CP +G C CG H C ++D
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVAHFQKDCPESQNSD 233
>gi|209413744|ref|NP_001127522.1| zinc finger CCHC domain-containing protein 9 [Pongo abelii]
gi|55730972|emb|CAH92203.1| hypothetical protein [Pongo abelii]
Length = 271
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
>gi|114599363|ref|XP_526871.2| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 6
[Pan troglodytes]
gi|114599365|ref|XP_001149663.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 3
[Pan troglodytes]
gi|114599369|ref|XP_001149795.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 5
[Pan troglodytes]
gi|410222042|gb|JAA08240.1| zinc finger, CCHC domain containing 9 [Pan troglodytes]
gi|410264124|gb|JAA20028.1| zinc finger, CCHC domain containing 9 [Pan troglodytes]
gi|410297934|gb|JAA27567.1| zinc finger, CCHC domain containing 9 [Pan troglodytes]
Length = 271
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
>gi|304434516|dbj|BAJ15435.1| VASA-like gene [Mytilus galloprovincialis]
Length = 745
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 493 CLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLC--CVNS--SIIGLKQVSCYNC 547
C +CG+SGH C E C+ C GH+ C N+ G + +C+ C
Sbjct: 148 CFKCGESGHMSRECPSAEQGGGGGGNRNCFKCNESGHMARECPNAEQGGGGGRSGNCFKC 207
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+SGH+ +C NS N C+KC + GH AR C
Sbjct: 208 QESGHMARDCPNSDSKGNA------CFKCNEGGHMARDC 240
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 19/97 (19%)
Query: 425 CSNCGKENHTAATCKMQKQ------NKPCFLCGSFKHRWKNCKQGQ---------DCFIN 469
C CG+ H + C +Q N+ CF C H + C + +CF
Sbjct: 148 CFKCGESGHMSRECPSAEQGGGGGGNRNCFKCNESGHMARECPNAEQGGGGGRSGNCFKC 207
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
+ S H+A DCP +D N C +C + GH C
Sbjct: 208 QESGHMARDCPNSDS----KGNACFKCNEGGHMARDC 240
>gi|387019989|gb|AFJ52112.1| Zinc finger CCHC domain-containing protein 7-like [Crotalus
adamanteus]
Length = 584
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 52/135 (38%), Gaps = 12/135 (8%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTD 483
TC NC K H + C K+ PC LC H +C + C H + +CP
Sbjct: 273 TCRNCDKRGHLSKNCPTPKKIPPCCLCAQRGHLQNSCP-ARFCLNCCLPGHCSRECP--- 328
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS 543
C RC GH +C + Q ++ G L +S +
Sbjct: 329 -EKMYWKKHCNRCDMRGHYADACPEIWR-------QYHLTTRPGPLKKADSYSVRPASAY 380
Query: 544 CYNCGQSGHLGPECA 558
CYNCG+ GH G EC+
Sbjct: 381 CYNCGEKGHYGFECS 395
>gi|397503391|ref|XP_003822308.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 1
[Pan paniscus]
gi|397503393|ref|XP_003822309.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Pan paniscus]
gi|397503395|ref|XP_003822310.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 3
[Pan paniscus]
Length = 271
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
>gi|46111529|ref|XP_382822.1| hypothetical protein FG02646.1 [Gibberella zeae PH-1]
gi|408400341|gb|EKJ79423.1| hypothetical protein FPSE_00354 [Fusarium pseudograminearum CS3096]
Length = 236
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 68/195 (34%), Gaps = 42/195 (21%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL--CYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL----------------------- 515
CP +S C CG GH +C +
Sbjct: 66 CPTLRLSGTGTSGRCYNCGQPGHLARACPNPVGPGPMGRGAPMGRGGFPGGYGRGGFAGG 125
Query: 516 -KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL--- 571
+ CY C H + + + CY CG+ GH+ + C A NG N
Sbjct: 126 PRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAGK 177
Query: 572 ICYKCGKEGHFARRC 586
CY+CG+ GH +R C
Sbjct: 178 TCYQCGEAGHISRDC 192
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS-- 543
++LS C +CG+ GH C A+ L CY CK GH S+ L + +
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSS---AERL----CYNCKQPGH----ESNGCPLPRTTEA 50
Query: 544 --CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY+C GH+ +C L+G ++ CY CG+ GH AR C
Sbjct: 51 KQCYHCQGLGHVQADCPT--LRLSGTGTSGRCYNCGQPGHLARAC 93
>gi|346970998|gb|EGY14450.1| zinc finger protein GIS2 [Verticillium dahliae VdLs.17]
Length = 204
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 55/150 (36%), Gaps = 33/150 (22%)
Query: 462 QGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC--------------- 506
+ + C+ +G H+ +DCP +S C CG GH +C
Sbjct: 30 EAKQCYHCQGLGHVQADCPTLRLSGAGTSGRCYNCGQPGHLARTCPTPAGVGLGRGAPVP 89
Query: 507 -------EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
A + CY C H + + + CY CG+ GH+ +
Sbjct: 90 RGGYGGFARGGFAGGPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SR 141
Query: 560 SCEALNGKKSNL---ICYKCGKEGHFARRC 586
C A NG N CY+CG+ GH +R C
Sbjct: 142 DCTAPNGGPLNTAGKTCYQCGEAGHISRDC 171
Score = 41.2 bits (95), Expect = 1.6, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 11/66 (16%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---------KQGQDCFINKGSEH 474
TC CG NH A C Q Q C+ CG H ++C G+ C+ + H
Sbjct: 109 TCYKCGGPNHFARDC--QAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAGH 166
Query: 475 LASDCP 480
++ DCP
Sbjct: 167 ISRDCP 172
>gi|134140561|gb|ABO61035.1| gag protein [Simian immunodeficiency virus]
Length = 516
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CYNCGQ GHL +C K + C+KCGKEGH AR+C
Sbjct: 402 CYNCGQFGHLARDCP--------KPKSTRCFKCGKEGHLARQC 436
>gi|291394962|ref|XP_002713967.1| PREDICTED: zinc finger, CCHC domain containing 9 [Oryctolagus
cuniculus]
Length = 263
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKIQCYIC 523
CF + H +DCP + + + C RCG + H+++ C+ + + +C++C
Sbjct: 122 CFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKIDPALGEFPFAKCFVC 181
Query: 524 KSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
GHL C N + C CG HL +C EA N ++S + G
Sbjct: 182 GEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCP---EAQNSERSVTV-------G 231
Query: 581 HFARRCGSNFKDRLRI 596
+A+ ++ +D L +
Sbjct: 232 RWAKGMSADHEDILDV 247
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C + H A C +N+ C+ CGS +H CK D
Sbjct: 118 NAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKIDPALGEFPFAK 177
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 178 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 218
>gi|358395035|gb|EHK44428.1| hypothetical protein TRIATDRAFT_300647 [Trichoderma atroviride IMI
206040]
Length = 222
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 68/194 (35%), Gaps = 41/194 (21%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C + + C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSAE--RLCYNCKQPGHESNGCPLPRSTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE-----------------------YHADDL 515
CP + C CG GH +C A+
Sbjct: 66 CPTLRLSGTATGGRCYNCGQPGHLARACPNPGNPGMGRGAPMGRGGFVGGYGRGGFANGP 125
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---I 572
+ CY C H + + + CY CG+ GH+ + C A NG N
Sbjct: 126 RPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAGKT 177
Query: 573 CYKCGKEGHFARRC 586
CY+CG+ GH +R C
Sbjct: 178 CYQCGEAGHISRDC 191
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 52/145 (35%), Gaps = 47/145 (32%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEG-------------EYHADDLKKI----QCYICKSFGH 528
++LS C +CG+ GH C E + L + QCY C+ GH
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRSTEAKQCYHCQGLGH 61
Query: 529 LCCVNSSIIGLKQVS------CYNCGQSGHLGPECANSCEALNGKKSNL----------- 571
V + L+ CYNCGQ GHL C N G+ + +
Sbjct: 62 ---VQADCPTLRLSGTATGGRCYNCGQPGHLARACPNPGNPGMGRGAPMGRGGFVGGYGR 118
Query: 572 ----------ICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 119 GGFANGPRPATCYKCGGPNHFARDC 143
>gi|90086147|dbj|BAE91626.1| unnamed protein product [Macaca fascicularis]
Length = 270
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 124 KNAMVCFHCRKPGHGVADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 183
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 184 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 228
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 125 NAMVCFHCRKPGHGVADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 184
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 185 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 225
>gi|403256355|ref|XP_003920846.1| PREDICTED: zinc finger CCHC domain-containing protein 9 [Saimiri
boliviensis boliviensis]
Length = 272
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 126 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 185
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 186 KCFVCGEMGHLSRACPDNPKGLYADGGGCKLCGSVEHLKKDCPES 230
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 127 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 186
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C ++D + +
Sbjct: 187 CFVCGEMGHLSRACPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSDRMVTV 239
>gi|261192892|ref|XP_002622852.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239588987|gb|EEQ71630.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|327352663|gb|EGE81520.1| hypothetical protein BDDG_04462 [Ajellomyces dermatitidis ATCC
18188]
Length = 190
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 71/197 (36%), Gaps = 56/197 (28%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG + H + C + K C+ CG + H+
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQ-------------------TGHI 62
Query: 476 ASDCPGTDQGNNLSSNF-----------CLRCGDSGHDLSSCE---------------GE 509
+ DC G+N +S C +CG GH +C
Sbjct: 63 SRDCTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQSGGYGSAGYGGAGGYG 122
Query: 510 YHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKS 569
++ CY C +GH+ G K CYNCG+ GH+ +C EA K
Sbjct: 123 GGYGGGRQQTCYSCGGYGHM--ARDCTQGQK---CYNCGEVGHVSRDCPT--EA----KG 171
Query: 570 NLICYKCGKEGHFARRC 586
+CYKC + GH C
Sbjct: 172 ERVCYKCKQTGHVQAAC 188
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 48/179 (26%)
Query: 440 MQKQNKPCFLCGSFKHRWKNC-KQGQ-DCFINKGSEHLASDCPGTDQGNNLSSNFCLRCG 497
Q ++ CF CG H+ ++C K+G C+ G H++ +C + C RCG
Sbjct: 3 YQSGSRGCFNCGEASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPK-----EKTCYRCG 57
Query: 498 DSGHDLSSCEGEYHADDLKKI-----------QCYICKSFGHLCCVNSS----------- 535
+GH C D+ +CY C GH+ N S
Sbjct: 58 QTGHISRDCTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIA-RNCSQSGGYGSAGYG 116
Query: 536 --------IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G +Q +CY+CG GH+ +C G+K CY CG+ GH +R C
Sbjct: 117 GAGGYGGGYGGGRQQTCYSCGGYGHMARDC------TQGQK----CYNCGEVGHVSRDC 165
>gi|449549455|gb|EMD40420.1| hypothetical protein CERSUDRAFT_43704, partial [Ceriporiopsis
subvermispora B]
Length = 125
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 51/124 (41%), Gaps = 17/124 (13%)
Query: 500 GHDLSSCEGEYHADDLKKIQCYICKSFGHL--CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
GH +C E CY C+ GH C + + KQ CY+CG GH+ EC
Sbjct: 2 GHIAENCTSEQRL-------CYNCRQPGHESNACPSPRSVAAKQ--CYSCGGVGHIQAEC 52
Query: 558 ANSCEALNGKKSNLICYKCGKEGHFARRC---GSNFKDRL-RISDLLFTAERPPTRARHF 613
+ +N N CY CG+ GH AR C F R + L T+ PP +
Sbjct: 53 PSL--RVNNNNHNQKCYNCGRFGHIARNCPNAAGGFASRAPPVGRALNTSALPPVKCYRC 110
Query: 614 VGSN 617
G N
Sbjct: 111 GGPN 114
Score = 45.8 bits (107), Expect = 0.076, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 25/126 (19%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H+A +C + C C GH+ ++C + QCY C GH+
Sbjct: 3 HIAENCTSEQR-------LCYNCRQPGHESNACPS---PRSVAAKQCYSCGGVGHIQAEC 52
Query: 534 SSII---GLKQVSCYNCGQSGHLGPECANSC-----------EALNGKK-SNLICYKCGK 578
S+ CYNCG+ GH+ C N+ ALN + CY+CG
Sbjct: 53 PSLRVNNNNHNQKCYNCGRFGHIARNCPNAAGGFASRAPPVGRALNTSALPPVKCYRCGG 112
Query: 579 EGHFAR 584
H AR
Sbjct: 113 PNHMAR 118
>gi|67423403|dbj|BAD99522.1| VASA RNA helicase [Daphnia magna]
Length = 775
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
H+A +CP G S C +CG+ GH C C+ C GH C
Sbjct: 149 HMARECP-KGGGGGGGSRACHKCGEEGHFSRECPQAGGGGGSGPRTCHKCGEEGHFSREC 207
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G +C+ CG+ GH EC C+KCG+EGH +R C
Sbjct: 208 PQGGGGGGGSRACHKCGEEGHFSRECPQGGGGGGSGPRT--CHKCGEEGHVSRDC 260
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQ 549
C +CG+ GH C + C+ C GH C G +C+ CG+
Sbjct: 141 CHKCGEEGHMARECPKGGGGGGGSR-ACHKCGEEGHFSRECPQAGGGGGSGPRTCHKCGE 199
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH EC G ++ C+KCG+EGHF+R C
Sbjct: 200 EGHFSRECPQGGGGGGGSRA---CHKCGEEGHFSREC 233
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 64/175 (36%), Gaps = 32/175 (18%)
Query: 425 CSNCGKENHTAATCK----MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
C CG+E H A C ++ C CG ++G H + +CP
Sbjct: 141 CHKCGEEGHMARECPKGGGGGGGSRACHKCG---------EEG----------HFSRECP 181
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSII 537
G C +CG+ GH C + C+ C GH C
Sbjct: 182 QAGGGGGSGPRTCHKCGEEGHFSRECPQGGGGGGGSR-ACHKCGEEGHFSRECPQGGGGG 240
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
G +C+ CG+ GH+ +C G + C+KC + GH ++ C + F +
Sbjct: 241 GSGPRTCHKCGEEGHVSRDCPQ-----GGGGGDSKCFKCHEAGHTSKDCPNPFSE 290
>gi|322705172|gb|EFY96760.1| zinc knuckle domain containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 223
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 69/194 (35%), Gaps = 41/194 (21%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSSERL--CYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEY-----------------------HADDL 515
CP + +S C CG GH +C +
Sbjct: 66 CPTLRLSGSATSGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGGFAGGFAGRGGFSGGP 125
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---I 572
+ CY C H + + + CY CG+ GH+ + C A NG N
Sbjct: 126 RPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAGKT 177
Query: 573 CYKCGKEGHFARRC 586
CY+CG+ GH +R C
Sbjct: 178 CYQCGEAGHISRDC 191
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 53/146 (36%), Gaps = 49/146 (33%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEG-------------EYHADDLKKI----QCYICKSFGH 528
++LS C +CG+ GH C E + L + QCY C+ GH
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGH 61
Query: 529 LCCVNSSIIGLKQVS------CYNCGQSGHLGPECANSCEALNGKKSNL----------- 571
V + L+ CYNCGQ GHL C N + G+ + +
Sbjct: 62 ---VQADCPTLRLSGSATSGRCYNCGQPGHLARACPNPVGPM-GRGAPMGRGGFAGGFAG 117
Query: 572 -----------ICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 118 RGGFSGGPRPATCYKCGGPNHFARDC 143
>gi|412986462|emb|CCO14888.1| predicted protein [Bathycoccus prasinos]
Length = 206
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 409 LRKPRYFDPPGWNS----ETCSNCGKENHTAATCKMQKQN---KPCFLCGSFKHRWKNCK 461
LR RY + NS + C NCG H C N CF+C H +NC
Sbjct: 69 LRDCRYHNGGDANSSRGQKICYNCGSSEHALRDCTEPNSNFAFAKCFVCDKVGHLSRNCP 128
Query: 462 Q--------GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
+ G C I KG +HLA DCP QG CLRCG+ GH
Sbjct: 129 ENKSGLYVNGGQCRICKGVDHLARDCP--KQG------ACLRCGEEGH 168
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 18/124 (14%)
Query: 447 CFLCGSFKHRWKNCK----------QGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLR 495
CF C H ++C+ +GQ C+ SEH DC T+ +N + C
Sbjct: 59 CFGCRRTGHSLRDCRYHNGGDANSSRGQKICYNCGSSEHALRDC--TEPNSNFAFAKCFV 116
Query: 496 CGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGP 555
C GH +C + QC ICK HL + KQ +C CG+ GHL
Sbjct: 117 CDKVGHLSRNCPENKSGLYVNGGQCRICKGVDHL-----ARDCPKQGACLRCGEEGHLSK 171
Query: 556 ECAN 559
EC N
Sbjct: 172 ECPN 175
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 49/127 (38%), Gaps = 18/127 (14%)
Query: 466 CFINKGSEHLASDC---PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
CF + + H DC G D ++ C CG S H L C + +C++
Sbjct: 59 CFGCRRTGHSLRDCRYHNGGDANSSRGQKICYNCGSSEHALRDCTEP--NSNFAFAKCFV 116
Query: 523 CKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
C GHL C N S + + C C HL +C C +CG+E
Sbjct: 117 CDKVGHLSRNCPENKSGLYVNGGQCRICKGVDHLARDCP----------KQGACLRCGEE 166
Query: 580 GHFARRC 586
GH ++ C
Sbjct: 167 GHLSKEC 173
>gi|71023633|ref|XP_762046.1| hypothetical protein UM05899.1 [Ustilago maydis 521]
gi|46101611|gb|EAK86844.1| hypothetical protein UM05899.1 [Ustilago maydis 521]
Length = 466
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 441 QKQNK-PCFLCGSFKHRWKNCKQGQDC-FINKGSEHLASDCP--GTDQGNNLSSNFCLRC 496
Q+Q+K CF C H K+C D I+ ++ SD P G D + C RC
Sbjct: 272 QRQSKLKCFACRGMGHSAKDCPNALDAQSISLKADTAPSDSPMIGRD-----AVGICFRC 326
Query: 497 GDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGL--KQVSCYNCGQSG 551
G + H LS C + D L C+IC S GHL C N++ G+ + SC C
Sbjct: 327 GSTEHTLSKCRKPALKNDALPYATCFICHSKGHLSSKCPNNAGRGVYPEGGSCKLCSSVE 386
Query: 552 HLGPEC 557
HL +C
Sbjct: 387 HLAKDC 392
>gi|355691442|gb|EHH26627.1| hypothetical protein EGK_16646 [Macaca mulatta]
Length = 270
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 124 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 183
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 184 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 228
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 125 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 184
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 185 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 225
>gi|319921905|gb|ADV78571.1| universal minicircle sequence-binding protein 1 [Leishmania
donovani]
Length = 115
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ CP ++ C CG++ H C E K CY C S
Sbjct: 6 CYKCGEAGHMSRSCP-----RAAATRSCYNCGETSHMSRDCPSE-----RKPKSCYNCGS 55
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G SCYNCG +GHL +C N ++ CY CG H +
Sbjct: 56 TDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPN-------ERKPKSCYNCGSTDHLS 108
Query: 584 RRC 586
R C
Sbjct: 109 REC 111
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNC 547
+S+ C +CG++GH SC CY C H+ K SCYNC
Sbjct: 1 MSAVTCYKCGEAGHMSRSCP-----RAAATRSCYNCGETSHM--SRDCPSERKPKSCYNC 53
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + HL EC N EA G + CY CG GH +R C
Sbjct: 54 GSTDHLSRECTN--EAKAGADTR-SCYNCGGTGHLSRDC 89
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQD---CFIN 469
P + +C NCG+ +H + C +++ K C+ CGS H + C K G D C+
Sbjct: 20 PRAAATRSCYNCGETSHMSRDCPSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNC 79
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
G+ HL+ DCP N C CG + H
Sbjct: 80 GGTGHLSRDCP-----NERKPKSCYNCGSTDH 106
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 33/137 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASDCP 480
TC CG+ H + +C + C+ CG H ++C ++ + C+ ++HL+ +C
Sbjct: 5 TCYKCGEAGHMSRSCPRAAATRSCYNCGETSHMSRDCPSERKPKSCYNCGSTDHLSRECT 64
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+ + C CG +GH C E K
Sbjct: 65 NEAKA-GADTRSCYNCGGTGHLSRDCPNE-----------------------------RK 94
Query: 541 QVSCYNCGQSGHLGPEC 557
SCYNCG + HL EC
Sbjct: 95 PKSCYNCGSTDHLSREC 111
>gi|444729593|gb|ELW70004.1| Zinc finger CCHC domain-containing protein 9 [Tupaia chinensis]
Length = 270
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 124 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 183
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 184 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLMKDCPKS 228
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 125 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 184
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H + C ++D + +
Sbjct: 185 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLMKDCPKSQNSDRMVTV 237
>gi|339245201|ref|XP_003378526.1| zinc finger CCHC domain-containing protein 9 [Trichinella spiralis]
gi|316972556|gb|EFV56229.1| zinc finger CCHC domain-containing protein 9 [Trichinella spiralis]
Length = 275
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 9/94 (9%)
Query: 424 TCSNCGKENHTAATCKMQKQNKP---CFLCGSFKHRWKNCKQGQD------CFINKGSEH 474
C C K+ HT A C+ + CF CGS +H KNCK + CF+ G H
Sbjct: 112 VCYCCRKKGHTLANCERNNDTQKLGVCFKCGSLEHTLKNCKSKANGLPYAFCFVCNGHGH 171
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG 508
LA C G + C +CG H + CE
Sbjct: 172 LAKSCKENPNGIYPNGGSCKKCGSIYHLVKDCEA 205
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 9/105 (8%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKI-QCYICKSFGH-LCCVNSSIIGLKQVSCY 545
+ C C GH L++CE +D +K+ C+ C S H L S GL C+
Sbjct: 108 MKQTVCYCCRKKGHTLANCE---RNNDTQKLGVCFKCGSLEHTLKNCKSKANGLPYAFCF 164
Query: 546 NCGQSGHLGPECANSCEALNGKKSNL-ICYKCGKEGHFARRCGSN 589
C GHL C E NG N C KCG H + C +N
Sbjct: 165 VCNGHGHLAKSCK---ENPNGIYPNGGSCKKCGSIYHLVKDCEAN 206
>gi|343422531|emb|CCD18439.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 361
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 59/154 (38%), Gaps = 37/154 (24%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCF----------LC--------GSFKHRWKNCKQGQDC 466
C +CG +H A C + ++ CF +C G F + C C
Sbjct: 56 CRSCGSSSHGQAKCPERIKSVECFQYHQKGHMIPMCPQTRCLNFGHFCQSSQLCASKPVC 115
Query: 467 FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSF 526
F H +++CP D G C RC + GHD++ C L+ QC++C
Sbjct: 116 FHCSMPGHTSTECPRKDMG-----RLCYRCKEPGHDMAKC--------LQSHQCHMCNQT 162
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
HL + +V C C QS H+ C S
Sbjct: 163 WHL------VTQCPEVLCNRCHQSAHMASACKMS 190
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 31/130 (23%)
Query: 474 HLASDCPGTDQGN--NLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI--------- 522
H DCP + ++ C CG S H + C + +K ++C+
Sbjct: 35 HFKEDCPHRRKRPRADIDIGICRSCGSSSHGQAKCP-----ERIKSVECFQYHQKGHMIP 89
Query: 523 ------CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
C +FGH C SS + + C++C GH EC K +CY+C
Sbjct: 90 MCPQTRCLNFGHFC--QSSQLCASKPVCFHCSMPGHTSTECPR-------KDMGRLCYRC 140
Query: 577 GKEGHFARRC 586
+ GH +C
Sbjct: 141 KEPGHDMAKC 150
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTD 483
C +C HT+ C + + C+ C H C Q C + + HL + CP
Sbjct: 114 VCFHCSMPGHTSTECPRKDMGRLCYRCKEPGHDMAKCLQSHQCHMCNQTWHLVTQCPEV- 172
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCE 507
C RC S H S+C+
Sbjct: 173 --------LCNRCHQSAHMASACK 188
>gi|145229969|ref|XP_001389293.1| zinc knuckle transcription factor (CnjB) [Aspergillus niger CBS
513.88]
gi|134055407|emb|CAK37116.1| unnamed protein product [Aspergillus niger]
Length = 481
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 72/171 (42%), Gaps = 22/171 (12%)
Query: 425 CSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQG-QDCFI--NKGSE-HL 475
CSNCG HTA CK +++ + C C + HR ++C + ++ F N G+E H
Sbjct: 273 CSNCGVLGHTARGCKEEREERERVGVKCVNCSADGHRARDCPEPRRNVFACRNCGAEDHK 332
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
AS+CP N+ C RC + GH C C C S H+
Sbjct: 333 ASECPNPRSAENVE---CKRCNEMGHFAKDC-----PQAPPPRTCRNCGSEDHIAKDCDK 384
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ V+C NC + GH +C S + C CG+ GH +RC
Sbjct: 385 PRDVSTVTCRNCDEVGHFSRDCPKK-----RDYSRVKCNNCGEMGHTIKRC 430
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFI--NKGSE 473
P N C NCG E+H A+ C + +N C C H K+C Q N GSE
Sbjct: 316 PRRNVFACRNCGAEDHKASECPNPRSAENVECKRCNEMGHFAKDCPQAPPPRTCRNCGSE 375
Query: 474 -HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
H+A DC D+ ++S+ C C + GH C + D +++C C GH
Sbjct: 376 DHIAKDC---DKPRDVSTVTCRNCDEVGHFSRDCPKKR---DYSRVKCNNCGEMGH 425
>gi|297796051|ref|XP_002865910.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311745|gb|EFH42169.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 268
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 447 CFLCGSFKHRWKNCKQGQD------CFINKGSEHLASDCPGTDQGNNLSS--NFCLRCGD 498
CF+C S H K C + + C + H +CP + N+ SS C CGD
Sbjct: 76 CFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCP---EKNDESSEKKLCYNCGD 132
Query: 499 SGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGP 555
+GH LS C K C+ICK GH+ C N I C CG HL
Sbjct: 133 TGHSLSHCPYPLEDGGTKFASCFICKGQGHISKNCPQNKHGIYPMGGCCKVCGSVAHLVK 192
Query: 556 ECAN 559
+C +
Sbjct: 193 DCPD 196
>gi|190347077|gb|EDK39288.2| hypothetical protein PGUG_03386 [Meyerozyma guilliermondii ATCC
6260]
Length = 175
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C +CG H + C Q C+ CG F H KNC +G G AS G+
Sbjct: 53 CYSCGDLGHVQSDCPTSAQGAKCYNCGQFGHISKNCSEG-------GRPAAAST--GSAP 103
Query: 485 GNNLSSN--FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK 540
S N C +CG H C+ A LK CY C GH+ C G K
Sbjct: 104 APKFSKNGTTCYKCGGPNHFARDCQ----AGSLK---CYACGKAGHISKDCNAGGDAGAK 156
Query: 541 QVSCYNCGQSGHLGPEC 557
+CYNCG++GH+ +C
Sbjct: 157 --TCYNCGKAGHISRDC 171
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 56/141 (39%), Gaps = 23/141 (16%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H NC+Q + C+ + H +++CP Q S C CGD GH S
Sbjct: 9 CYKCGEVGHLADNCQQTERLCYNCRKPGHESTECPEPKQ---PSQKQCYSCGDLGHVQSD 65
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C + +CY C FGH+ NC + G S A
Sbjct: 66 CP-----TSAQGAKCYNCGQFGHIS--------------KNCSEGGRPAAASTGSAPAPK 106
Query: 566 GKKSNLICYKCGKEGHFARRC 586
K+ CYKCG HFAR C
Sbjct: 107 FSKNGTTCYKCGGPNHFARDC 127
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 67/180 (37%), Gaps = 33/180 (18%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-----CFINKGSEHLASD 478
TC CG+ H A C Q+ + C+ C H C + + C+ H+ SD
Sbjct: 8 TCYKCGEVGHLADNC--QQTERLCYNCRKPGHESTECPEPKQPSQKQCYSCGDLGHVQSD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCE----------GEYHADDLKK--IQCYICKSF 526
CP + QG C CG GH +C G A K CY C
Sbjct: 66 CPTSAQGAK-----CYNCGQFGHISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGP 120
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H + + CY CG++GH+ +C G CY CGK GH +R C
Sbjct: 121 NHF----ARDCQAGSLKCYACGKAGHISKDCN-----AGGDAGAKTCYNCGKAGHISRDC 171
>gi|395825575|ref|XP_003786003.1| PREDICTED: zinc finger CCHC domain-containing protein 9 [Otolemur
garnettii]
Length = 271
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAFGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVKHLKKDCPES 229
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAFGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C ++D + +
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVKHLKKDCPESQNSDQMVTV 238
>gi|308805915|ref|XP_003080269.1| zinc finger, CCHC domain containing 9 (ISS) [Ostreococcus tauri]
gi|116058729|emb|CAL54436.1| zinc finger, CCHC domain containing 9 (ISS) [Ostreococcus tauri]
Length = 238
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 18/95 (18%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKP---CFLCGSFKHRWKNCKQ--------GQDCFINKG 471
+TC NCG HTA+ C + N CF+CG H ++C + G C I +
Sbjct: 81 KTCYNCGSREHTASACAEKWTNYAHAKCFVCGETGHLSRSCGKNANGVYINGGCCKICRA 140
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
+HL DCP +G++ C+RCG+ GH + C
Sbjct: 141 KDHLVKDCP--HKGDS-----CIRCGERGHFAAQC 168
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 17/127 (13%)
Query: 466 CFINKGSEHLASDC---PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
CF +G H DC G G+ C CG H S+C ++ + +C++
Sbjct: 53 CFGCRGVGHTLRDCRVAKGGAAGSVRGEKTCYNCGSREHTASACAEKW--TNYAHAKCFV 110
Query: 523 CKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
C GHL C N++ + + C C HL +C + ++ C +CG+
Sbjct: 111 CGETGHLSRSCGKNANGVYINGGCCKICRAKDHLVKDCPHKGDS---------CIRCGER 161
Query: 580 GHFARRC 586
GHFA +C
Sbjct: 162 GHFAAQC 168
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 55/147 (37%), Gaps = 34/147 (23%)
Query: 420 WNSE-TCSNCGKENHTAATCKMQKQN--------KPCFLCGSFKHRWKNCKQGQDCFINK 470
W S+ TC C HT C++ K K C+ CGS
Sbjct: 47 WRSKVTCFGCRGVGHTLRDCRVAKGGAAGSVRGEKTCYNCGS------------------ 88
Query: 471 GSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC 530
EH AS C ++ N + C CG++GH SC + + C IC++ HL
Sbjct: 89 -REHTASACA--EKWTNYAHAKCFVCGETGHLSRSCGKNANGVYINGGCCKICRAKDHL- 144
Query: 531 CVNSSIIGLKQVSCYNCGQSGHLGPEC 557
K SC CG+ GH +C
Sbjct: 145 ---VKDCPHKGDSCIRCGERGHFAAQC 168
>gi|440470333|gb|ELQ39408.1| zinc finger protein GIS2 [Magnaporthe oryzae Y34]
Length = 230
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 71/195 (36%), Gaps = 42/195 (21%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL--CYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD------------------------D 514
CP S+ C CG GH +C A+
Sbjct: 66 CPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGYDGGYGGRGGFAGG 125
Query: 515 LKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI-- 572
+ CY C H + + + CY CG+ GH+ + C A NG N +
Sbjct: 126 ARPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTVGK 177
Query: 573 -CYKCGKEGHFARRC 586
CY+CG+ GH +R+C
Sbjct: 178 TCYQCGEAGHISRQC 192
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS-- 543
++LS C +CG+ GH C A+ L CY CK GH S+ L + +
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSS---AERL----CYNCKQPGH----ESNGCPLPRTTEA 50
Query: 544 --CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY+C GH+ +C L+G SN CY CG+ GH AR C
Sbjct: 51 KQCYHCQGLGHVQADCPT--LRLSGAGSNGRCYSCGQPGHLARAC 93
>gi|351706763|gb|EHB09682.1| Zinc finger CCHC domain-containing protein 9 [Heterocephalus
glaber]
Length = 271
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKIQCYIC 523
CF + H +DCP + ++ + C RCG + H+++ C + + +C++C
Sbjct: 130 CFHCRKPGHGVADCPAALENQDMGTGICYRCGSTEHEITKCRAKVDPALGEFPFAKCFVC 189
Query: 524 KSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
GHL C N + C CG HL +C
Sbjct: 190 GEMGHLSRSCPDNPKGLYADGGGCKVCGSVEHLKKDC 226
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H C+ D
Sbjct: 126 NTMVCFHCRKPGHGVADCPAALENQDMGTGICYRCGSTEHEITKCRAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCKVCGSVEHLKKDC 226
>gi|389626373|ref|XP_003710840.1| zinc finger protein GIS2 [Magnaporthe oryzae 70-15]
gi|351650369|gb|EHA58228.1| zinc finger protein GIS2 [Magnaporthe oryzae 70-15]
gi|440480347|gb|ELQ61019.1| zinc finger protein GIS2 [Magnaporthe oryzae P131]
Length = 230
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 71/195 (36%), Gaps = 42/195 (21%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL--CYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD------------------------D 514
CP S+ C CG GH +C A+
Sbjct: 66 CPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGYGGGYGGRGGFAGG 125
Query: 515 LKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI-- 572
+ CY C H + + + CY CG+ GH+ + C A NG N +
Sbjct: 126 ARPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTVGK 177
Query: 573 -CYKCGKEGHFARRC 586
CY+CG+ GH +R+C
Sbjct: 178 TCYQCGEAGHISRQC 192
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS-- 543
++LS C +CG+ GH C A+ L CY CK GH S+ L + +
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSS---AERL----CYNCKQPGH----ESNGCPLPRTTEA 50
Query: 544 --CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY+C GH+ +C L+G SN CY CG+ GH AR C
Sbjct: 51 KQCYHCQGLGHVQADCPT--LRLSGAGSNGRCYSCGQPGHLARAC 93
>gi|409073472|gb|EKM74103.1| hypothetical protein AGABI1DRAFT_133631 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 297
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRI 596
C+ CG+ GH+G C + G+K N C+ CGK GH A+ C SN R+R+
Sbjct: 224 CHKCGKFGHIGKNCEEKKKNF-GEKKNFKCFSCGKFGHIAKDCRSNRSGRIRV 275
>gi|336372146|gb|EGO00486.1| hypothetical protein SERLA73DRAFT_136388 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384888|gb|EGO26036.1| hypothetical protein SERLADRAFT_466996 [Serpula lacrymans var.
lacrymans S7.9]
Length = 330
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 466 CFINKGSEHLASDCPGTDQG--NNLSSNFCLRCGDSGHDLSSC-EGEYHADDLKKIQCYI 522
CF + H A DCP +G NN C RCG S H+L+ C + E + L C++
Sbjct: 152 CFACRKKGHAARDCPTATEGRKNNKIVGICYRCGSSRHNLARCKKPEDPLNPLPFASCFV 211
Query: 523 CKSFGHLC--CVNSSIIGLKQVS--CYNCGQSGHLGPEC 557
C GHL C + G+ C CG + HL C
Sbjct: 212 CSGKGHLASSCPKNKERGIYPDGGCCKLCGDTTHLAKNC 250
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 425 CSNCGKENHTAATCKM----QKQNKP---CFLCGSFKHRWKNCKQGQD---------CFI 468
C C K+ H A C +K NK C+ CGS +H CK+ +D CF+
Sbjct: 152 CFACRKKGHAARDCPTATEGRKNNKIVGICYRCGSSRHNLARCKKPEDPLNPLPFASCFV 211
Query: 469 NKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSC 506
G HLAS CP ++G C CGD+ H +C
Sbjct: 212 CSGKGHLASSCPKNKERGIYPDGGCCKLCGDTTHLAKNC 250
>gi|378734858|gb|EHY61317.1| cellular nucleic acid-binding protein [Exophiala dermatitidis
NIH/UT8656]
Length = 182
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 70/178 (39%), Gaps = 21/178 (11%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG E H + C + K C+ CG+ H ++C+ G ++
Sbjct: 17 DCPKKGTPTCYNCGAEGHVSRECTAAPKPKSCYKCGNEGHLARDCQAAPAGGAGGGWGNV 76
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ-------CYICKSFGH 528
+ G S+ C RCG GH C CY C GH
Sbjct: 77 GGNAYGGG-----SARECYRCGGQGHIARDCTSGGQGGYGGGYSRGGGGQTCYSCGGVGH 131
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ G Q CYNCG+ GHL +C + EA S ICYKC + GH C
Sbjct: 132 M--SRDCTQGRAQ-KCYNCGEQGHLSRDCPS--EA----SSERICYKCKQPGHLQSAC 180
>gi|322697703|gb|EFY89480.1| zinc knuckle domain containing protein [Metarhizium acridum CQMa
102]
Length = 223
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 69/194 (35%), Gaps = 41/194 (21%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSSERL--CYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEY-----------------------HADDL 515
CP + +S C CG GH +C +
Sbjct: 66 CPTLRLSGSATSGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGGFAGGFAGRGGFSGGP 125
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---I 572
+ CY C H + + + CY CG+ GH+ + C A NG N
Sbjct: 126 RPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAGKT 177
Query: 573 CYKCGKEGHFARRC 586
CY+CG+ GH +R C
Sbjct: 178 CYQCGEAGHISRDC 191
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 53/146 (36%), Gaps = 49/146 (33%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEG-------------EYHADDLKKI----QCYICKSFGH 528
++LS C +CG+ GH C E + L + QCY C+ GH
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGH 61
Query: 529 LCCVNSSIIGLKQVS------CYNCGQSGHLGPECANSCEALNGKKSNL----------- 571
V + L+ CYNCGQ GHL C N + G+ + +
Sbjct: 62 ---VQADCPTLRLSGSATSGRCYNCGQPGHLARACPNPVGPM-GRGAPMGRGGFAGGFAG 117
Query: 572 -----------ICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 118 RGGFSGGPRPATCYKCGGPNHFARDC 143
>gi|307691190|ref|NP_001182668.1| zinc finger, CCHC domain containing 9 [Macaca mulatta]
gi|402871993|ref|XP_003899928.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 1
[Papio anubis]
gi|402871995|ref|XP_003899929.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Papio anubis]
gi|380817128|gb|AFE80438.1| zinc finger CCHC domain-containing protein 9 [Macaca mulatta]
gi|383422143|gb|AFH34285.1| zinc finger CCHC domain-containing protein 9 [Macaca mulatta]
gi|384949794|gb|AFI38502.1| zinc finger CCHC domain-containing protein 9 [Macaca mulatta]
Length = 270
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 124 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 183
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 184 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 228
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 125 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 184
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 185 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 225
>gi|384486824|gb|EIE79004.1| hypothetical protein RO3G_03709 [Rhizopus delemar RA 99-880]
Length = 160
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 64/171 (37%), Gaps = 35/171 (20%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ-----GQDCFINKGSEHLASDC 479
C NC +E H + C K C+ C H ++C Q G C+ H++ DC
Sbjct: 20 CYNCRQEGHMSKDCTEPPAEKLCYKCSQPGHMSRDCTQSSYTDGPTCYSCNQVGHMSRDC 79
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
P +GN+ + + CY C GH +
Sbjct: 80 P---EGNSGGYS-----------------SRGGYGGSRASCYTCGQSGHF---SRDCTAG 116
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNF 590
+ CYNCG SGH+ +C +A CYKC + GH AR C S F
Sbjct: 117 QSPKCYNCGNSGHISRDCDQPAQA-------RACYKCQQVGHIARDCPSEF 160
>gi|50761973|ref|XP_424900.1| PREDICTED: zinc finger CCHC domain-containing protein 9 [Gallus
gallus]
Length = 235
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 24/129 (18%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K CF + H +DCP + ++ + C RCG + HD+ C+ +
Sbjct: 90 KNAMVCFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDIGKCKAK----------- 138
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
++ ++ C+ CG+ GHL C ++ + L + C CG
Sbjct: 139 -----------IDPAVGAFPYAKCFICGEMGHLSRSCPDNPKGLYAEGG--CCRLCGSVE 185
Query: 581 HFARRCGSN 589
H+ + C N
Sbjct: 186 HYRKDCPEN 194
>gi|18398546|ref|NP_565427.1| cold shock domain protein 3 [Arabidopsis thaliana]
gi|75165198|sp|Q94C69.1|CSP3_ARATH RecName: Full=Cold shock domain-containing protein 3; Short=AtCSP3
gi|14334920|gb|AAK59638.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis
thaliana]
gi|17104541|gb|AAL34159.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis
thaliana]
gi|148726892|dbj|BAF63841.1| cold shock domain protein 3 [Arabidopsis thaliana]
gi|330251603|gb|AEC06697.1| cold shock domain protein 3 [Arabidopsis thaliana]
Length = 301
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 75/204 (36%), Gaps = 40/204 (19%)
Query: 425 CSNCGKENHTAATC--------------KMQKQNKPCFLCGSFKHRWKNCKQG------- 463
C NCG+ H A C + C++CG H ++C+Q
Sbjct: 96 CFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGGNSGG 155
Query: 464 -----QDCFINKGSEHLASDCPGTDQGNNLSSNF--------CLRCGDSGHDLSSC-EGE 509
+ C+ HLA DC G GN C CG GH C +
Sbjct: 156 GGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNG 215
Query: 510 YHADDLKKIQCYICKSFGHLCCVNSSII----GLKQVSCYNCGQSGHLGPECANSCEALN 565
CY C GH+ V +S I G +CY CG +GHL +C +
Sbjct: 216 GGNVGGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSS 275
Query: 566 GKKSNL-ICYKCGKEGHFARRCGS 588
G C+ CGKEGHFAR C S
Sbjct: 276 GGGGGSNKCFICGKEGHFARECTS 299
>gi|358389553|gb|EHK27145.1| hypothetical protein TRIVIDRAFT_188061 [Trichoderma virens Gv29-8]
Length = 458
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 425 CSNCGKENHTAATCKMQK----QNKP---CFLCGSFKHRWKNCKQGQ-DCFINKG---SE 473
C NCG+ HT C +K KP C+ CG+ HR ++C + + D F K S
Sbjct: 260 CYNCGELGHTTKGCSQEKTEPSSEKPKISCYNCGAEGHRVRDCPEPRVDKFACKNCGKSG 319
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H A +C ++ N+ + C +C +GH C D C C GH+
Sbjct: 320 HNAKEC---EEPPNMDNVECRKCNKTGHFAKDCP------DGGSRACRNCGQEGHISKEC 370
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ V+C NC ++GH EC + S + C C + GH RC
Sbjct: 371 DQPKNMDNVTCRNCEETGHFSKECPKPRDW-----SKVQCSNCEQFGHTKVRC 418
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 53/140 (37%), Gaps = 15/140 (10%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-PCFLCGSFKHRWKNCKQGQ-----DCFINKGSEHLAS 477
+C NCG E H C + +K C CG H K C++ +C + H A
Sbjct: 288 SCYNCGAEGHRVRDCPEPRVDKFACKNCGKSGHNAKECEEPPNMDNVECRKCNKTGHFAK 347
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DCP + S C CG GH C+ ++ + C C+ GH
Sbjct: 348 DCP------DGGSRACRNCGQEGHISKECD---QPKNMDNVTCRNCEETGHFSKECPKPR 398
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V C NC Q GH C
Sbjct: 399 DWSKVQCSNCEQFGHTKVRC 418
>gi|378732167|gb|EHY58626.1| cellular nucleic acid-binding protein [Exophiala dermatitidis
NIH/UT8656]
Length = 464
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 70/177 (39%), Gaps = 32/177 (18%)
Query: 425 CSNCGKENHTAATCKMQKQNK-----PCFLCGSFKHRWKNCKQ-----GQDCFINKGSEH 474
C NC K H C +K + C+LCG HR ++C Q G+ C I + +H
Sbjct: 247 CRNCEKVGHKTKDCPEEKMVREQLIVTCYLCGEQGHRVRDCTQERKKPGRACRICEAEDH 306
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CV 532
+A DCP N C CG H C D +K C C H+ C
Sbjct: 307 IAKDCP------NREKQTCRNCGAEDHMARECP------DREKRTCRKCGEEDHIARECP 354
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCE-ALNGKK--SNLICYKCGKEGHFARRC 586
N+ + +C C H +C E L ++ S ++C C ++GH RC
Sbjct: 355 NAP-----KQTCNICDAEDHFAKDCPKKGEPGLRPRRDWSQVVCSLCEQKGHGRARC 406
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 14/125 (11%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H DCP C CG+ GH + C E C IC++ H +
Sbjct: 255 HKTKDCPEEKMVREQLIVTCYLCGEQGHRVRDCTQERKKPGRA---CRICEAEDH---IA 308
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
++ +C NCG H+ EC + + C KCG+E H AR C + K
Sbjct: 309 KDCPNREKQTCRNCGAEDHMARECPD--------REKRTCRKCGEEDHIARECPNAPKQT 360
Query: 594 LRISD 598
I D
Sbjct: 361 CNICD 365
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 8/98 (8%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG--QDCFINKGSE 473
D P +TC NCG E+H A C ++ + C CG H + C Q C I +
Sbjct: 310 DCPNREKQTCRNCGAEDHMARECP-DREKRTCRKCGEEDHIARECPNAPKQTCNICDAED 368
Query: 474 HLASDC-----PGTDQGNNLSSNFCLRCGDSGHDLSSC 506
H A DC PG + S C C GH + C
Sbjct: 369 HFAKDCPKKGEPGLRPRRDWSQVVCSLCEQKGHGRARC 406
>gi|315272237|gb|ADU02689.1| gag protein [Equine infectious anemia virus]
Length = 482
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 11/50 (22%)
Query: 537 IGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+G KQ +CYNCG+SGH +C K+ IC+KC + GHF+R+C
Sbjct: 375 LGAKQ-TCYNCGKSGHFSSQC----------KAPKICFKCKQPGHFSRQC 413
>gi|238490081|ref|XP_002376278.1| zinc knuckle domain protein (Byr3), putative [Aspergillus flavus
NRRL3357]
gi|83770972|dbj|BAE61105.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698666|gb|EED55006.1| zinc knuckle domain protein (Byr3), putative [Aspergillus flavus
NRRL3357]
gi|391871140|gb|EIT80305.1| E3 ubiquitin ligase interacting with arginine methyltransferase
[Aspergillus oryzae 3.042]
Length = 190
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 18/128 (14%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNF----CLRCGDSGHDLSSCE---GEYHADDLKKI 518
C+ G H++ DCP G+ S C +CG GH +C ++
Sbjct: 72 CYRCSGVGHISRDCPQAPSGDGYSGATGGQECYKCGHVGHIARNCSQGGYSGDGYGGRQH 131
Query: 519 QCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGK 578
CY C GH+ G K CYNCG+ GH+ +C + + +CYKC +
Sbjct: 132 TCYSCGGHGHM--ARDCTHGQK---CYNCGEVGHVSRDCPSE------ARGERVCYKCKQ 180
Query: 579 EGHFARRC 586
GH C
Sbjct: 181 PGHVQAAC 188
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 12/92 (13%)
Query: 423 ETCSNCGKENHTAATCKMQK--------QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEH 474
+ C CG H A C + C+ CG H ++C GQ C+ H
Sbjct: 101 QECYKCGHVGHIARNCSQGGYSGDGYGGRQHTCYSCGGHGHMARDCTHGQKCYNCGEVGH 160
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
++ DCP +G + C +C GH ++C
Sbjct: 161 VSRDCPSEARGERV----CYKCKQPGHVQAAC 188
>gi|409078190|gb|EKM78554.1| hypothetical protein AGABI1DRAFT_129654 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 369
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRI 596
C+ CG+ GH+G C + G+K N C+ CGK GH + C SN R+R+
Sbjct: 296 CHKCGKFGHIGKNCEEKKKNF-GEKKNFKCFSCGKFGHIVKNCRSNRSGRIRV 347
>gi|37728001|gb|AAR02367.1| gag protein [Simian immunodeficiency virus]
Length = 509
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 8/46 (17%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
CYNCGQ GH+ +C K N C+KCG+EGH AR+C S+
Sbjct: 399 CYNCGQYGHVARDCP--------KPRNKKCFKCGREGHLARQCRSD 436
>gi|402871997|ref|XP_003899930.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 3
[Papio anubis]
Length = 327
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 181 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 240
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG HL +C S
Sbjct: 241 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPES 285
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 182 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 241
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CF+ HL+ CP +G C CG H C
Sbjct: 242 CFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 282
>gi|346318384|gb|EGX87987.1| zinc knuckle transcription factor (CnjB), putative [Cordyceps
militaris CM01]
Length = 487
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 29/172 (16%)
Query: 425 CSNCGKENHTAATCKMQK-----QNKPCFLCGSFKHRWKNCKQG-QDCFI--NKGSEHLA 476
CSNC + H A C +K + + C+ C HR ++C + +D F N G +++
Sbjct: 256 CSNCDELGHIAKQCPQEKVVREVKVQTCYNCSGEGHRVRDCPEPRKDRFACRNCGYVNMS 315
Query: 477 SDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNS 534
P N+ + SGH + CE E +L + C C+ GH C
Sbjct: 316 PRSPYLFIDVNVGDS------KSGHRATDCEEE---PNLDNVTCRKCEETGHFAKDCPKG 366
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G C NCGQ GH +C N++C C K GHF+R C
Sbjct: 367 GARG-----CRNCGQEGHFAADCDQP-----PNLDNVVCRNCEKNGHFSRDC 408
>gi|70991320|ref|XP_750509.1| zinc knuckle domain protein (Byr3) [Aspergillus fumigatus Af293]
gi|66848141|gb|EAL88471.1| zinc knuckle domain protein (Byr3), putative [Aspergillus fumigatus
Af293]
gi|159130982|gb|EDP56095.1| zinc knuckle domain protein (Byr3), putative [Aspergillus fumigatus
A1163]
Length = 190
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 36/182 (19%)
Query: 416 DPPGWNSETCSNCGK---ENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGS 472
D P + TC NCG + H + C + + K C+ CG H + C Q GS
Sbjct: 32 DCPKKGTPTCYNCGATIGQGHVSRECTVAPKEKSCYRCGVAGHISRECSQ-------AGS 84
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE--------GEYHADDLKKIQCYICK 524
+ P Q C +CG GH +C + ++ CY C
Sbjct: 85 GDNYNGAPSGGQ-------ECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCG 137
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
FGH+ G K CYNCG GH+ +C K +CYKC + GH
Sbjct: 138 GFGHM--ARDCTHGQK---CYNCGDVGHVSRDCPTE------AKGERVCYKCKQPGHVQA 186
Query: 585 RC 586
C
Sbjct: 187 AC 188
>gi|380494230|emb|CCF33305.1| zinc knuckle [Colletotrichum higginsianum]
Length = 226
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 68/193 (35%), Gaps = 40/193 (20%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL--CYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD----------------------DLK 516
CP +S C CG GH +C + +
Sbjct: 66 CPTLRLSGAGTSGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRGAFGGYGRGGFAGGPR 125
Query: 517 KIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---IC 573
CY C H + + + CY CG+ GH+ + C A NG N C
Sbjct: 126 PATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAGKTC 177
Query: 574 YKCGKEGHFARRC 586
Y+CG+ GH +R C
Sbjct: 178 YQCGEAGHISRDC 190
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 17/107 (15%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS-- 543
++LS C +CG+ GH C A+ L CY CK GH S+ L + +
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSS---AERL----CYNCKQPGH----ESNGCPLPRTTEA 50
Query: 544 --CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
CY+C GH+ +C L+G ++ CY CG+ GH AR C S
Sbjct: 51 KQCYHCQGLGHVQADCPT--LRLSGAGTSGRCYNCGQPGHLARACPS 95
>gi|270017203|gb|EFA13649.1| hypothetical protein TcasGA2_TC004984 [Tribolium castaneum]
Length = 765
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 50/188 (26%)
Query: 354 RLGRRVEDTVSVGPIVGERQQKKRRKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPR 413
++GR ++ + +G + RQ + + + K K E+ KE + +V + R+
Sbjct: 577 KVGRLDQNEIQLGQL---RQNRGETQAATIRMVKKKAEEILKEKTIQVGMVRAQVERRVE 633
Query: 414 YFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSE 473
C NC NH A+ C +K+NK C+ CG G +
Sbjct: 634 VL--------RCFNCLGYNHKASECTKEKRNKSCYRCG-------------------GED 666
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGH------------DLSSCEGEYHADDLKKI-QC 520
H+A DC T + FC+ C +GH L++ + E+ + +KI +C
Sbjct: 667 HMAKDCKSTVE-------FCVVCRSAGHRAGSGKCRLFKQALAAAKKEHKSRGGQKISRC 719
Query: 521 YICKSFGH 528
CK GH
Sbjct: 720 QTCKVDGH 727
>gi|155371841|ref|NP_001094525.1| zinc finger CCHC domain-containing protein 9 [Bos taurus]
gi|148877390|gb|AAI46121.1| ZCCHC9 protein [Bos taurus]
Length = 271
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + + H +DCP + + + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRQTGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H+ +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPES 229
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C + H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRQTGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C ++D + +
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPESQNSDRVVTV 238
>gi|342186041|emb|CCC95526.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 492
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 30/165 (18%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPG 481
+ C CG H+ ++C ++ ++ CF C H C Q + C+ H + C
Sbjct: 55 ASVCRGCGSSRHSQSSCPVRARSMECFQCHQKGHTMPTCPQTR-CYNCGNFGHSSQRC-- 111
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQ 541
LS C C GH + C+ + + CY CK GH + S+ L
Sbjct: 112 ------LSRPLCFHCSAPGHRSTDCQLK-----TRGRVCYRCKEPGHE-MADCSLTAL-- 157
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C+ C Q+GH+ C +C +C GH A C
Sbjct: 158 --CFTCHQAGHVAARCPEG-----------LCSRCNARGHTAAAC 189
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 66/175 (37%), Gaps = 42/175 (24%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASD 478
G + CSNC E+H C + K C +CG H +C + G E AS
Sbjct: 3 GSLTVACSNCLAEDHFFQNCPLVK----CLVCGETGHSRDDCTNAKK-RPRSGEEEEASV 57
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
C G CG S H SSC + ++C+ C GH ++
Sbjct: 58 CRG--------------CGSSRHSQSSCPVR-----ARSMECFQCHQKGH------TMPT 92
Query: 539 LKQVSCYNCGQSGHLGPECAN-----SCEALNGKKSNL-------ICYKCGKEGH 581
Q CYNCG GH C + C A + ++ +CY+C + GH
Sbjct: 93 CPQTRCYNCGNFGHSSQRCLSRPLCFHCSAPGHRSTDCQLKTRGRVCYRCKEPGH 147
>gi|327297590|ref|XP_003233489.1| zinc knuckle domain-containing protein [Trichophyton rubrum CBS
118892]
gi|326464795|gb|EGD90248.1| zinc knuckle domain-containing protein [Trichophyton rubrum CBS
118892]
Length = 190
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 71/197 (36%), Gaps = 56/197 (28%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG + H + C + K C+ CG + H+
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTQPPKEKSCYRCGM-------------------TGHI 62
Query: 476 ASDCPGTDQGNN---------LSSNFCLRCGDSGHDLSSCEGE----------------- 509
+ +CP + G+N C +CG GH +C +
Sbjct: 63 SRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSY 122
Query: 510 YHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKS 569
+ CY C +GH+ G K CYNCG+ GH+ +C EA K
Sbjct: 123 SGGYGGRSQTCYSCGGYGHM--ARGCTQGQK---CYNCGEVGHVSRDCPT--EA----KG 171
Query: 570 NLICYKCGKEGHFARRC 586
+CYKC + GH C
Sbjct: 172 ERVCYKCKQAGHVQAAC 188
>gi|154345718|ref|XP_001568796.1| putative universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066138|emb|CAM43928.1| putative universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|449310630|gb|AGE92542.1| universal minicircle sequence binding protein [Leishmania
braziliensis]
Length = 115
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ CP ++ C CG++GH C E K C+ C S
Sbjct: 6 CYKCGEAGHMSRSCPRV-----AATRSCYNCGETGHMSRDCPSE-----RKPKSCFNCGS 55
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G SCYNCG +GHL +C N ++ CY CG H +
Sbjct: 56 TEHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPN-------ERKPKSCYNCGSTEHLS 108
Query: 584 RRC 586
R C
Sbjct: 109 REC 111
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNC 547
+S+ C +CG++GH SC CY C GH+ K SC+NC
Sbjct: 1 MSALTCYKCGEAGHMSRSC-----PRVAATRSCYNCGETGHM--SRDCPSERKPKSCFNC 53
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + HL EC N EA G + CY CG GH +R C
Sbjct: 54 GSTEHLSRECTN--EAKAGADTR-SCYNCGGTGHLSRDC 89
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQD---CFINKGSEH 474
+ +C NCG+ H + C +++ K CF CGS +H + C K G D C+ G+ H
Sbjct: 25 TRSCYNCGETGHMSRDCPSERKPKSCFNCGSTEHLSRECTNEAKAGADTRSCYNCGGTGH 84
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGH 501
L+ DCP N C CG + H
Sbjct: 85 LSRDCP-----NERKPKSCYNCGSTEH 106
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 52/137 (37%), Gaps = 33/137 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASDCP 480
TC CG+ H + +C + C+ CG H ++C ++ + CF +EHL+ +C
Sbjct: 5 TCYKCGEAGHMSRSCPRVAATRSCYNCGETGHMSRDCPSERKPKSCFNCGSTEHLSRECT 64
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+ + C CG +GH C E K
Sbjct: 65 NEAKA-GADTRSCYNCGGTGHLSRDCPNE-----------------------------RK 94
Query: 541 QVSCYNCGQSGHLGPEC 557
SCYNCG + HL EC
Sbjct: 95 PKSCYNCGSTEHLSREC 111
>gi|255716112|ref|XP_002554337.1| KLTH0F02904p [Lachancea thermotolerans]
gi|238935720|emb|CAR23900.1| KLTH0F02904p [Lachancea thermotolerans CBS 6340]
Length = 162
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 32/158 (20%)
Query: 440 MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDS 499
M K C++CG H ++C+ + C+ H+ SDC + C CG++
Sbjct: 1 MSGSQKACYVCGKIGHLAEDCESERLCYNCNQPGHVQSDC---TMAKTVEFKQCYNCGET 57
Query: 500 GHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVN---------SSIIGLKQVSCYNCG 548
GH S C+ + +CY C GH+ C + ++ +VSCY CG
Sbjct: 58 GHVKSECDVQ---------RCYNCNQTGHISRDCADPKKPRFAGGAAPSRANKVSCYRCG 108
Query: 549 QSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ +C +S+ CY CGK GH ++ C
Sbjct: 109 GPNHMAKDCL---------QSDSKCYACGKVGHISKDC 137
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 48/124 (38%), Gaps = 30/124 (24%)
Query: 489 SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYN 546
S C CG GH CE E CY C GH+ C + + KQ CYN
Sbjct: 4 SQKACYVCGKIGHLAEDCESER--------LCYNCNQPGHVQSDCTMAKTVEFKQ--CYN 53
Query: 547 CGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFTAERP 606
CG++GH+ EC CY C + GH +R C K R F
Sbjct: 54 CGETGHVKSEC-----------DVQRCYNCNQTGHISRDCADPKKPR-------FAGGAA 95
Query: 607 PTRA 610
P+RA
Sbjct: 96 PSRA 99
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 26/146 (17%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP-- 480
C NC + H + C M K + K C+ CG H C Q C+ + H++ DC
Sbjct: 27 CYNCNQPGHVQSDCTMAKTVEFKQCYNCGETGHVKSECDV-QRCYNCNQTGHISRDCADP 85
Query: 481 ---------GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
+ N +S C RCG H C +D +CY C GH+
Sbjct: 86 KKPRFAGGAAPSRANKVS---CYRCGGPNHMAKDC---LQSDS----KCYACGKVGHI-- 133
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPEC 557
G +CYNC ++GH+ +C
Sbjct: 134 SKDCPAGSSAKTCYNCNEAGHISRDC 159
>gi|118344198|ref|NP_001071924.1| zinc finger protein [Ciona intestinalis]
gi|92081548|dbj|BAE93321.1| zinc finger protein [Ciona intestinalis]
Length = 432
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 60/149 (40%), Gaps = 30/149 (20%)
Query: 413 RYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGS 472
RYF G ++ C NC H A C K+ KPCF CG KG
Sbjct: 174 RYF---GDSNVRCKNCDLTGHIANECSKPKKVKPCFQCGI-----------------KG- 212
Query: 473 EHLASDCPGTDQGNNLSSNF-CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
H+A CP + +F C RC GH S C DL + Q + G L
Sbjct: 213 -HMAKFCPKHIPVSRRHLSFSCNRCEQMGHIQSECP------DLWR-QYHKTTKAGSLVT 264
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+ + K+ CYNCG+ GH G +C S
Sbjct: 265 SSLPLPMSKKKCCYNCGKRGHFGFDCKKS 293
>gi|392863891|gb|EAS35332.2| zinc knuckle transcription factor [Coccidioides immitis RS]
Length = 482
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 60/157 (38%), Gaps = 25/157 (15%)
Query: 440 MQKQNKPCFLCGSFKHRWKNCKQGQ--------DCFINKGSEHLASDC--PGTDQGNNLS 489
M +Q C CG H + CKQ C I K H A DC P D+
Sbjct: 260 MDRQVPKCDNCGEIGHTRRGCKQEPATVERVEVKCVICKEIGHRARDCIQPRIDKSG--- 316
Query: 490 SNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQ 549
C CG+ H C A+ ++C C+ GH + G+ +C NCG+
Sbjct: 317 ---CRNCGNPDHHAKQCPEPRSAEG---VECKKCQQVGHFA-KDCPEKGVNSRACRNCGE 369
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH+ EC N+ C C K GH +R C
Sbjct: 370 EGHMSKECDKP-----RNMDNVTCRNCEKTGHMSRDC 401
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 40/162 (24%)
Query: 425 CSNCGKENHTAATCK-----MQKQNKPCFLCGSFKHRWKNCKQ----------------- 462
C NCG+ HT CK +++ C +C HR ++C Q
Sbjct: 267 CDNCGEIGHTRRGCKQEPATVERVEVKCVICKEIGHRARDCIQPRIDKSGCRNCGNPDHH 326
Query: 463 -----------GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYH 511
G +C + H A DCP ++G ++S C CG+ GH C+ +
Sbjct: 327 AKQCPEPRSAEGVECKKCQQVGHFAKDCP--EKG--VNSRACRNCGEEGHMSKECDKPRN 382
Query: 512 ADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHL 553
D+ + C C+ GH+ +V C NC + GH
Sbjct: 383 MDN---VTCRNCEKTGHMSRDCPEEKDWSKVQCTNCKEMGHT 421
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN--FKDRLRI 596
+C+NCGQ GH EC +K++ C+ CG+EGH C + FK RI
Sbjct: 51 ACHNCGQPGHFSRECPEP------RKASGACFNCGEEGHNKAECPNPRVFKGTCRI 100
>gi|322698317|gb|EFY90088.1| zinc knuckle transcription factor (CnjB), putative [Metarhizium
acridum CQMa 102]
Length = 452
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 425 CSNCGKENHTAATC---KMQKQNKP---CFLCGSFKHRWKNCKQGQ-DCFINKG---SEH 474
C NCG+ H++ C K++K+ +P C CG HR ++C + + D F + S H
Sbjct: 248 CQNCGELGHSSKFCTQEKVEKKAQPAISCSNCGDEGHRIRDCPEPRVDKFACRNCGKSGH 307
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLCCVN 533
ASDC ++ NL + C +CG+ GH C +G A C C GH+
Sbjct: 308 RASDC---EEPPNLENMECRKCGEKGHMGKDCPQGGSRA-------CRNCGQEGHIAKDC 357
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ V+C NC ++GH +C S + C C K GH RC
Sbjct: 358 DQPRNMDNVTCRNCEKTGHFSRDCPEP-----KDWSKVQCSNCQKFGHTKVRC 405
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 54/132 (40%), Gaps = 33/132 (25%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-PCFLCGSFKHRWKNCKQ------------------GQ 464
+CSNCG E H C + +K C CG HR +C++ G+
Sbjct: 275 SCSNCGDEGHRIRDCPEPRVDKFACRNCGKSGHRASDCEEPPNLENMECRKCGEKGHMGK 334
Query: 465 DC-------FINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLK 516
DC N G E H+A DC DQ N+ + C C +GH C D
Sbjct: 335 DCPQGGSRACRNCGQEGHIAKDC---DQPRNMDNVTCRNCEKTGHFSRDCP---EPKDWS 388
Query: 517 KIQCYICKSFGH 528
K+QC C+ FGH
Sbjct: 389 KVQCSNCQKFGH 400
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 474 HLASDCPG--TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
H +CP T+ GN+ ++N C CG++GH + C + C CK GH+
Sbjct: 36 HEEPNCPNQHTEAGNDDANNKCFNCGETGHRAADCP------TPRDTACRYCKKEGHMI- 88
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+ C NCGQ GH+ C N+
Sbjct: 89 --RDCPDKPPMVCDNCGQEGHVRKNCENA 115
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 17/100 (17%)
Query: 419 GWNSET--CSNCGKENHTAATCKMQKQ-------NKPCFLCGSFKHRWKNCKQGQD--CF 467
GWN C C +E H C Q N CF CG HR +C +D C
Sbjct: 20 GWNQPQVKCGACSQEGHEEPNCPNQHTEAGNDDANNKCFNCGETGHRAADCPTPRDTACR 79
Query: 468 INKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE 507
K H+ DCP + C CG GH +CE
Sbjct: 80 YCKKEGHMIRDCP------DKPPMVCDNCGQEGHVRKNCE 113
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 13/108 (12%)
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEY--HADDLKKIQCYICKSFGHLCCVNSSIIG 538
G D G N C C GH+ +C ++ +D +C+ C GH +
Sbjct: 16 GNDSGWNQPQVKCGACSQEGHEEPNCPNQHTEAGNDDANNKCFNCGETGHR---AADCPT 72
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +C C + GH+ +C + K ++C CG+EGH + C
Sbjct: 73 PRDTACRYCKKEGHMIRDCPD--------KPPMVCDNCGQEGHVRKNC 112
>gi|359475089|ref|XP_003631583.1| PREDICTED: zinc finger protein GIS2-like isoform 2 [Vitis vinifera]
Length = 246
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 79/212 (37%), Gaps = 41/212 (19%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
++P ++ N C NC H A+ C + C+ C H NC C
Sbjct: 46 CKRPGHYARECPNVAVCHNCSLPGHIASECTTRSL---CWNCQEPGHTASNCPNEGICHT 102
Query: 469 NKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ------- 519
+ HLA DC P G+ N C + GH + C + ++ +K
Sbjct: 103 CGKTGHLARDCSAPPVPPGDLRLCNNCYK---QGHIAADCTNDKACNNCRKTGHLARDCR 159
Query: 520 ----CYICKSFGHLC--CVNSSIIG----------LKQVSCYNCGQSGHLGPECANSCEA 563
C +C GH+ C ++++G + + C NC Q GH+ +CA
Sbjct: 160 NDPVCNLCNVSGHVARQCPKANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCA----- 214
Query: 564 LNGKKSNLICYKCGKEGHFARRCGSN-FKDRL 594
+IC CG GH A C S F DR
Sbjct: 215 ----APLMICRNCGGRGHMAFECPSGRFMDRF 242
>gi|348587606|ref|XP_003479558.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like [Cavia
porcellus]
Length = 271
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + + + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGVADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+C++C GHL C N + C CG HL +C
Sbjct: 185 KCFVCGEMGHLSRSCPENPKGLYADGGGCKLCGSVEHLKRDC 226
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 40/108 (37%), Gaps = 15/108 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGVADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD 513
CF+ HL+ CP +G C CG H C HAD
Sbjct: 186 CFVCGEMGHLSRSCPENPKGLYADGGGCKLCGSVEHLKRDCPEGQHAD 233
>gi|119196333|ref|XP_001248770.1| hypothetical protein CIMG_02541 [Coccidioides immitis RS]
Length = 300
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 48/118 (40%), Gaps = 25/118 (21%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDL--------------------KKIQCYICKSFGHL--- 529
C CGDS H ++ + A D K+ CY C GH+
Sbjct: 132 CFTCGDSAHQVNMMRAPFVARDCPKKGSVICYNCGGRDCNEPAKEKSCYRCGLTGHISRD 191
Query: 530 CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG 587
C G + CY CGQ GH+ EC E+ G+ CYKCG+ GH +R CG
Sbjct: 192 CPQAGESGGARGQECYKCGQVGHISRECPQGGES--GEARGQECYKCGQVGHISRNCG 247
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 66/185 (35%), Gaps = 36/185 (19%)
Query: 408 LLRKPRYF-DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDC 466
++R P D P S C NCG + C + K C+ CG
Sbjct: 144 MMRAPFVARDCPKKGSVICYNCGGRD-----CNEPAKEKSCYRCGL-------------- 184
Query: 467 FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSF 526
+ H++ DCP + C +CG GH C + + + +CY C
Sbjct: 185 -----TGHISRDCPQAGESGGARGQECYKCGQVGHISRECPQGGESGEARGQECYKCGQV 239
Query: 527 GHLC--CVNSS---IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
GH+ C S G S G++GH+ +C K +CYKC + GH
Sbjct: 240 GHISRNCGQYSGYNGGGYNAGSYRYGGETGHVSRDCTTE------GKGERVCYKCKQPGH 293
Query: 582 FARRC 586
C
Sbjct: 294 VQAAC 298
>gi|149739143|ref|XP_001504345.1| PREDICTED: zinc finger CCHC domain-containing protein 7-like
isoform 1 [Equus caballus]
Length = 547
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 53/140 (37%), Gaps = 22/140 (15%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDCPG 481
TC NC + H + C ++ +PC LC H C + DC + S H + P
Sbjct: 242 TCRNCDRCGHLSKNCPFPQKVRPCCLCSERGHLQYACPARFCLDCSLPMSSTHRCLERPS 301
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCE---GEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
+ C RC GH +C +YH G S++
Sbjct: 302 WRKR-------CDRCDMIGHHADACPEIWRQYHLTTKPGPPKKPKTPSG-----QSAL-- 347
Query: 539 LKQVSCYNCGQSGHLGPECA 558
V CYNCGQ GH G ECA
Sbjct: 348 ---VYCYNCGQEGHYGHECA 364
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 22/148 (14%)
Query: 451 GSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEY 510
G + HR+ + + C HL+ +CP + C C + GH +C +
Sbjct: 228 GRWTHRYYSANKNVTCRNCDRCGHLSKNCPFPQKVRP-----CCLCSERGHLQYACPARF 282
Query: 511 HADDLKKIQCYICKSFGHLC---------CVNSSIIGLKQVSCYNCGQSGHLGPECANSC 561
D C + S H C C +IG +C + HL +
Sbjct: 283 CLD------CSLPMSSTHRCLERPSWRKRCDRCDMIGHHADACPEIWRQYHLTTKPGPPK 336
Query: 562 EAL--NGKKSNLICYKCGKEGHFARRCG 587
+ +G+ + + CY CG+EGH+ C
Sbjct: 337 KPKTPSGQSALVYCYNCGQEGHYGHECA 364
>gi|409076434|gb|EKM76805.1| hypothetical protein AGABI1DRAFT_130835 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 368
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + G+K N C+ CGK GH A+ C SN R+R
Sbjct: 295 CHKCGKFGHIGKNCKEKKKNF-GEKKNFKCFSCGKLGHIAKDCRSNRSGRIR 345
>gi|403169101|ref|XP_003328636.2| hypothetical protein PGTG_10595 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167802|gb|EFP84217.2| hypothetical protein PGTG_10595 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 227
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 56/146 (38%), Gaps = 33/146 (22%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF HLA CP S C C SGH+ +SC + QC+ C
Sbjct: 9 CFKCGALGHLAEQCPA-------ESRLCYNCKQSGHESASCPNP-RTGGVDGRQCFTCGG 60
Query: 526 FGHLC--CVNSSIIG--------LKQVSCYNCGQSGHLGPECANSCEA---------LNG 566
FGHL C +++ +G CY CGQ GH+ C +S + G
Sbjct: 61 FGHLAADCPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSCNHSGNGVGQGAFQSRIGG 120
Query: 567 KKSN------LICYKCGKEGHFARRC 586
K + CYKC H+AR C
Sbjct: 121 YKPRPAPSQPVQCYKCQGMNHYARDC 146
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH--LCCVNSSIIGLKQVS 543
+ LS+ C +CG GH C E CY CK GH C N G+
Sbjct: 2 SGLSNRACFKCGALGHLAEQCPAE-------SRLCYNCKQSGHESASCPNPRTGGVDGRQ 54
Query: 544 CYNCGQSGHLGPECANSCEALN-----GKKSNLICYKCGKEGHFARRC 586
C+ CG GHL +C ++ N G CY CG+ GH +R C
Sbjct: 55 CFTCGGFGHLAADCPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSC 102
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 69/181 (38%), Gaps = 41/181 (22%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ-------GQDCFINKG 471
G ++ C CG H A C +++ C+ C H +C G+ CF G
Sbjct: 3 GLSNRACFKCGALGHLAEQCP--AESRLCYNCKQSGHESASCPNPRTGGVDGRQCFTCGG 60
Query: 472 SEHLASDCP-GTDQGNNLSS--NF----CLRCGDSGHDLSSC--------EGEYHA---- 512
HLA+DCP T GN ++ +F C CG GH SC +G + +
Sbjct: 61 FGHLAADCPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSCNHSGNGVGQGAFQSRIGG 120
Query: 513 -----DDLKKIQCYICKSFGHL---CCVNSSIIGL-----KQVSCYNCGQSGHLGPECAN 559
+ +QCY C+ H C L K +C+NC Q H+ C
Sbjct: 121 YKPRPAPSQPVQCYKCQGMNHYARDCMAIQPPPALQPRYLKTRTCFNCQQPEHIASNCPG 180
Query: 560 S 560
S
Sbjct: 181 S 181
>gi|218195961|gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indica Group]
Length = 988
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 61/162 (37%), Gaps = 43/162 (26%)
Query: 427 NCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGN 486
+ G AAT +Q C +CG+ H +NC G D D T G
Sbjct: 837 SAGMSTPLAATRNLQS----CNICGANGHSAQNCHVGADM-----------DMQETSAGG 881
Query: 487 NLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSC 544
+ N+ G+ + CY CK GH C S GL+ C
Sbjct: 882 SSMGNYNSIAGNGSSE-----------------CYKCKQPGHYARDCPGQSTGGLE---C 921
Query: 545 YNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ C Q GH +C ++ G + C+KC + GHFAR C
Sbjct: 922 FKCKQPGHFSRDCP--VQSTGGSE----CFKCKQPGHFARDC 957
>gi|296412703|ref|XP_002836061.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629863|emb|CAZ80218.1| unnamed protein product [Tuber melanosporum]
Length = 183
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 74/187 (39%), Gaps = 34/187 (18%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKP-CFLCGSFKHRWKNC---KQGQDCFINKGSEH 474
G N+ C NCG+ H A C K+ P C+ CG ++C + + C+ + H
Sbjct: 6 GNNARACYNCGEGGHQARECP--KRGTPVCYNCGRMFFPRRDCTGPAKEKSCYRCGQTGH 63
Query: 475 LASDCPGTDQ---------GNNLSSNFCLRCGDSGHDLSSCEGE------YHADDLKKIQ 519
L+ DC Q + C +CG GH C ++
Sbjct: 64 LSRDCNDAPQQVGSFGGGSYGSGGGAECYKCGKVGHIARQCTASGAGYGGPPGGGARQQT 123
Query: 520 CYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
CY C +GHL G K CYNCGQ GHL +C + + + +CYKC +
Sbjct: 124 CYSCGGYGHL--SRDCTQGQK---CYNCGQIGHLSRDCPS--------EQDRVCYKCKQP 170
Query: 580 GHFARRC 586
GH C
Sbjct: 171 GHVMASC 177
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 17/112 (15%)
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG-LKQ 541
D G+ ++ C CG+ GH A + K +C + G + G K+
Sbjct: 2 DFGSGNNARACYNCGEGGHQ---------ARECPKRGTPVCYNCGRMFFPRRDCTGPAKE 52
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLI-------CYKCGKEGHFARRC 586
SCY CGQ+GHL +C ++ + + CYKCGK GH AR+C
Sbjct: 53 KSCYRCGQTGHLSRDCNDAPQQVGSFGGGSYGSGGGAECYKCGKVGHIARQC 104
>gi|443897220|dbj|GAC74561.1| vesicle coat complex AP-2, alpha subunit [Pseudozyma antarctica T-34]
Length = 1140
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 56/169 (33%), Gaps = 50/169 (29%)
Query: 425 CSNCGKENHTAATCKMQKQN--KPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NC + H ++ C+ + K C+ CG G H+ +DCP
Sbjct: 996 CFNCLEPGHESSACEAPRTADAKQCYGCG-------------------GKGHIRADCPTP 1036
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
G ++ C CGD GH C + K V
Sbjct: 1037 ASG---AAKACYTCGDQGHRARDCPQNPKPPAAAES---------------------KPV 1072
Query: 543 SCYNCGQSGHLGPEC-----ANSCEALNGKKSNLICYKCGKEGHFARRC 586
+C NCGQ H +C + + K CY C + GH A+ C
Sbjct: 1073 TCRNCGQPNHFAKDCKAPAAPGTAQPKPKKSKLKSCYTCNQPGHIAKEC 1121
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 48/141 (34%), Gaps = 45/141 (31%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C C + GH+ S+CE AD KQ CY CG GH
Sbjct: 996 CFNCLEPGHESSACEAPRTADA-------------------------KQ--CYGCGGKGH 1028
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRAR- 611
+ +C A K+ CY CG +GH AR C N K AE P R
Sbjct: 1029 IRADCPTP--ASGAAKA---CYTCGDQGHRARDCPQNPKPPA-------AAESKPVTCRN 1076
Query: 612 -----HFVGSNGTPHGLGNAQ 627
HF P G AQ
Sbjct: 1077 CGQPNHFAKDCKAPAAPGTAQ 1097
>gi|77416879|sp|P05960.3|POL_HV1C4 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin
Length = 550
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C+A K C+KCG+EGH + C + LR DL
Sbjct: 388 KTVKCFNCGKEGHI----ARNCKAPRKKG----CWKCGREGHQMKDCTERQANFLR-EDL 438
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P +AR F +N G GR+N+ E G
Sbjct: 439 AF----PQGKAREFSSEQTRANSPTRGELQVWGRDNNSLSEAG 477
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
C NCGKE H A CK ++ K C+ CG H+ K+C + Q F+
Sbjct: 392 CFNCGKEGHIARNCKAPRK-KGCWKCGREGHQMKDCTERQANFL 434
>gi|296194212|ref|XP_002744881.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Callithrix jacchus]
Length = 271
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+C++C GHL C N + C CG HL +C
Sbjct: 185 KCFVCGEMGHLSRACPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 15/117 (12%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
CF+ HL+ CP +G C CG H C ++D + + ++
Sbjct: 186 CFVCGEMGHLSRACPDNPKGLYADGGGCKLCGSVEHLKKDCPENQNSDRMVTVGRWV 242
>gi|449267847|gb|EMC78743.1| Zinc finger CCHC domain-containing protein 9, partial [Columba
livia]
Length = 169
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 24/126 (19%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K CF + H +DCP + ++ + C RCG + HD+S C+ +
Sbjct: 24 KNAMVCFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDISKCKAK----------- 72
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
V+ ++ C+ CG+ GHL C ++ + L + + C CG
Sbjct: 73 -----------VDPAVGPFPYAKCFICGEMGHLSRSCPDNPKGLYAEGGS--CRLCGSVE 119
Query: 581 HFARRC 586
HF + C
Sbjct: 120 HFRKDC 125
>gi|338720647|ref|XP_003364217.1| PREDICTED: zinc finger CCHC domain-containing protein 7-like
isoform 2 [Equus caballus]
Length = 544
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 53/140 (37%), Gaps = 22/140 (15%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDCPG 481
TC NC + H + C ++ +PC LC H C + DC + S H + P
Sbjct: 239 TCRNCDRCGHLSKNCPFPQKVRPCCLCSERGHLQYACPARFCLDCSLPMSSTHRCLERPS 298
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEG---EYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
+ C RC GH +C +YH G S++
Sbjct: 299 WRKR-------CDRCDMIGHHADACPEIWRQYHLTTKPGPPKKPKTPSG-----QSAL-- 344
Query: 539 LKQVSCYNCGQSGHLGPECA 558
V CYNCGQ GH G ECA
Sbjct: 345 ---VYCYNCGQEGHYGHECA 361
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 22/148 (14%)
Query: 451 GSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEY 510
G + HR+ + + C HL+ +CP + C C + GH +C +
Sbjct: 225 GRWTHRYYSANKNVTCRNCDRCGHLSKNCPFPQKVRP-----CCLCSERGHLQYACPARF 279
Query: 511 HADDLKKIQCYICKSFGHLC---------CVNSSIIGLKQVSCYNCGQSGHLGPECANSC 561
D C + S H C C +IG +C + HL +
Sbjct: 280 CLD------CSLPMSSTHRCLERPSWRKRCDRCDMIGHHADACPEIWRQYHLTTKPGPPK 333
Query: 562 EAL--NGKKSNLICYKCGKEGHFARRCG 587
+ +G+ + + CY CG+EGH+ C
Sbjct: 334 KPKTPSGQSALVYCYNCGQEGHYGHECA 361
>gi|195997645|ref|XP_002108691.1| hypothetical protein TRIADDRAFT_51887 [Trichoplax adhaerens]
gi|190589467|gb|EDV29489.1| hypothetical protein TRIADDRAFT_51887 [Trichoplax adhaerens]
Length = 361
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 35/132 (26%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
HL+ CP + C CG+ GH L+SC ++ CY C GH C
Sbjct: 138 HLSYQCPMKKKMT------CRICGEIGHKLNSCPNQF---------CYKCDQQGHRGKEC 182
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSC-----------------EALNGKKSNLICY 574
N + K+ +C C GH+ EC + E LN + + CY
Sbjct: 183 PNG-LAKDKRKTCRRCFMRGHVEKECPDRWRQYYATTKFGPPKKPPDELLNAQNPRVYCY 241
Query: 575 KCGKEGHFARRC 586
CGK+GH+ C
Sbjct: 242 NCGKKGHYGHEC 253
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 20/161 (12%)
Query: 404 VLRMLLRKPRYFDPPGWN-SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ 462
V+ + +K RYF+ + C C + H + C M+K+ C +CG H+ +C
Sbjct: 108 VMGTIGKKFRYFNNTNHVINRKCHICLELGHLSYQCPMKKK-MTCRICGEIGHKLNSCPN 166
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSN---FCLRCGDSGHDLSSCEGEYHADDLKKIQ 519
Q C+ H +CP N L+ + C RC GH C + Q
Sbjct: 167 -QFCYKCDQQGHRGKECP-----NGLAKDKRKTCRRCFMRGHVEKECPDRWR-------Q 213
Query: 520 CYICKSFGHLCCVNSSIIGLK--QVSCYNCGQSGHLGPECA 558
Y FG ++ + +V CYNCG+ GH G EC
Sbjct: 214 YYATTKFGPPKKPPDELLNAQNPRVYCYNCGKKGHYGHECV 254
>gi|171677448|ref|XP_001903675.1| hypothetical protein [Podospora anserina S mat+]
gi|170936792|emb|CAP61450.1| unnamed protein product [Podospora anserina S mat+]
Length = 229
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 61/163 (37%), Gaps = 38/163 (23%)
Query: 464 QDCFINKGSEHLASDCPGT--DQGNNLSSNFCLRCGDSGHDLSSCE-------------- 507
+ C+ +G H+ ++CP + G N C CG H +C
Sbjct: 57 KQCYHCQGVGHVQAECPTMRLNGGPGGPHNRCYTCGQPNHIARNCPSAQGGMAPGPMPGR 116
Query: 508 -------GEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
G +H + CY C H + + + CY CG+ GH+ +
Sbjct: 117 GGFGPARGGFHPGGARHATCYKCGGPNHY----ARDCQAQAMKCYACGKLGHI----SRD 168
Query: 561 CEALNGKKSNL---ICYKCGKEGHFARRC----GSNFKDRLRI 596
C A NG N CY+CG+ GH +R C G+N D +
Sbjct: 169 CTAPNGGPLNTAGKTCYQCGEAGHISRDCPKRNGANGADAPEV 211
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 53/149 (35%), Gaps = 20/149 (13%)
Query: 422 SETCSNCGKENHTAATCKMQKQNK----P---CFLCGSFKHRWKNCKQGQDCFINKGSEH 474
S+ C +C H A C + N P C+ CG H +NC Q
Sbjct: 56 SKQCYHCQGVGHVQAECPTMRLNGGPGGPHNRCYTCGQPNHIARNCPSAQGGMAPGPMPG 115
Query: 475 LASDCP--GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL--- 529
P G C +CG H C+ + ++CY C GH+
Sbjct: 116 RGGFGPARGGFHPGGARHATCYKCGGPNHYARDCQAQ-------AMKCYACGKLGHISRD 168
Query: 530 CCV-NSSIIGLKQVSCYNCGQSGHLGPEC 557
C N + +CY CG++GH+ +C
Sbjct: 169 CTAPNGGPLNTAGKTCYQCGEAGHISRDC 197
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 11/75 (14%)
Query: 415 FDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---------KQGQD 465
F P G TC CG NH A C+ Q C+ CG H ++C G+
Sbjct: 126 FHPGGARHATCYKCGGPNHYARDCQAQAMK--CYACGKLGHISRDCTAPNGGPLNTAGKT 183
Query: 466 CFINKGSEHLASDCP 480
C+ + H++ DCP
Sbjct: 184 CYQCGEAGHISRDCP 198
>gi|326437736|gb|EGD83306.1| hypothetical protein PTSG_03915 [Salpingoeca sp. ATCC 50818]
Length = 315
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 58/169 (34%), Gaps = 41/169 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTD 483
TC CG + H A C + K+ +C + G H + CP
Sbjct: 107 TCYKCGGQGHIAVMCPSPEGA-------------KDSPSESECHLCHGKGHFQARCP--- 150
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEG------EYHADDLKKIQCYICKSFGHLCCVNSSII 537
N + N C +CG GH C G Y D
Sbjct: 151 --NTVPRNVCWKCGMYGHIGRECGGGMGYADPYAPHDPYGRP------------PYYGGG 196
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G +CY CG+ GHL C S NG+K +C+ C K GH AR C
Sbjct: 197 GGFDRTCYVCGERGHLAARCPRS--TYNGEK---LCHVCRKPGHIARDC 240
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 24/127 (18%)
Query: 480 PGTDQGNNLSSN-FCLRCGDSGHDLSSCEGEYHA-DDLKKIQCYICKSFGHLC--CVNSS 535
P ++G + C +CG GH C A D + +C++C GH C N+
Sbjct: 94 PAAEEGQQPAGGRTCYKCGGQGHIAVMCPSPEGAKDSPSESECHLCHGKGHFQARCPNT- 152
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSN----------------LICYKCGKE 579
+ + C+ CG GH+G EC + + CY CG+
Sbjct: 153 ---VPRNVCWKCGMYGHIGRECGGGMGYADPYAPHDPYGRPPYYGGGGGFDRTCYVCGER 209
Query: 580 GHFARRC 586
GH A RC
Sbjct: 210 GHLAARC 216
>gi|330915239|ref|XP_003296952.1| hypothetical protein PTT_07202 [Pyrenophora teres f. teres 0-1]
gi|311330642|gb|EFQ94956.1| hypothetical protein PTT_07202 [Pyrenophora teres f. teres 0-1]
Length = 389
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 518 IQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
CY C+ GHL + + K CY C ++GH+ +C A KK CY CG
Sbjct: 282 FMCYKCRGEGHLARNCTVKLEPKPAICYKCHEAGHIARKCTKVPPAPITKKP-FTCYNCG 340
Query: 578 KEGHFARRCGSNFKDRLRISDLL 600
+ GH AR C DR + ++
Sbjct: 341 ESGHMAREC--TLLDRRHVVPVI 361
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C-- 531
A + P + C +C GH +C + + K CY C GH+ C
Sbjct: 267 ARNTPAIQGAKSQVPFMCYKCRGEGHLARNCTVKL---EPKPAICYKCHEAGHIARKCTK 323
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPEC 557
V + I K +CYNCG+SGH+ EC
Sbjct: 324 VPPAPITKKPFTCYNCGESGHMAREC 349
>gi|322710166|gb|EFZ01741.1| hypothetical protein MAA_02970 [Metarhizium anisopliae ARSEF 23]
Length = 452
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 425 CSNCGKENHTAATC---KMQKQNKP---CFLCGSFKHRWKNCKQGQ-DCFINKG---SEH 474
C NCG+ H++ C K++K+ +P C CG HR ++C + + D F + S H
Sbjct: 248 CHNCGELGHSSKFCTQEKVEKKAQPAISCSNCGGEGHRIRDCPEPRVDKFACRNCGKSGH 307
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLCCVN 533
ASDC ++ NL + C +CG+ GH C +G A C C GH+
Sbjct: 308 RASDC---EEPPNLDNMECRKCGEKGHMGKDCPQGGSRA-------CRNCGQEGHMAKEC 357
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ V+C NC ++GH +C S + C C K GH RC
Sbjct: 358 DQPRNMDNVTCRNCEKTGHFSRDCPEP-----KDWSKVQCSNCQKFGHTKVRC 405
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 56/140 (40%), Gaps = 15/140 (10%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-PCFLCGSFKHRWKNCKQ-----GQDCFINKGSEHLAS 477
+CSNCG E H C + +K C CG HR +C++ +C H+
Sbjct: 275 SCSNCGGEGHRIRDCPEPRVDKFACRNCGKSGHRASDCEEPPNLDNMECRKCGEKGHMGK 334
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DCP QG S C CG GH C+ + D+ + C C+ GH
Sbjct: 335 DCP---QG---GSRACRNCGQEGHMAKECDQPRNMDN---VTCRNCEKTGHFSRDCPEPK 385
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V C NC + GH C
Sbjct: 386 DWSKVQCSNCQKFGHTKVRC 405
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 474 HLASDCPG--TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
H ++CP T+ GN+ ++N C CG++GH + C + C CK GH+
Sbjct: 36 HEEANCPNQHTEAGNDDANNKCFNCGETGHRAADCP------TPRDTACRYCKKEGHMI- 88
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+ C NCGQ GH+ C N+
Sbjct: 89 --RDCPDKPPMVCDNCGQEGHMRKNCENA 115
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 17/100 (17%)
Query: 419 GWNSET--CSNCGKENHTAATCKMQKQ-------NKPCFLCGSFKHRWKNCKQGQD--CF 467
GWN C C +E H A C Q N CF CG HR +C +D C
Sbjct: 20 GWNQPQVKCGACSQEGHEEANCPNQHTEAGNDDANNKCFNCGETGHRAADCPTPRDTACR 79
Query: 468 INKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE 507
K H+ DCP + C CG GH +CE
Sbjct: 80 YCKKEGHMIRDCP------DKPPMVCDNCGQEGHMRKNCE 113
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEY--HADDLKKIQCYICKSFGHLCCVNSSIIG 538
G D G N C C GH+ ++C ++ +D +C+ C GH +
Sbjct: 16 GNDSGWNQPQVKCGACSQEGHEEANCPNQHTEAGNDDANNKCFNCGETGHR---AADCPT 72
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC-GSNFKDRLRIS 597
+ +C C + GH+ +C + K ++C CG+EGH + C + +R ++
Sbjct: 73 PRDTACRYCKKEGHMIRDCPD--------KPPMVCDNCGQEGHMRKNCENARVINRDHVA 124
Query: 598 DL 599
D+
Sbjct: 125 DI 126
>gi|354497833|ref|XP_003511022.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Cricetulus griseus]
gi|344251598|gb|EGW07702.1| Zinc finger CCHC domain-containing protein 9 [Cricetulus griseus]
Length = 271
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C +
Sbjct: 125 KNAMVCFHCRRPGHGVADCPAALESQDMGTGICYRCGSTEHEITKCRARVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+C++C GHL C N + C CG H +C
Sbjct: 185 KCFVCGEMGHLSRSCSENPKGVYADGGGCTLCGSVEHFKKDC 226
>gi|432954505|ref|XP_004085510.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Oryzias latipes]
Length = 259
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 24/121 (19%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF + H +DCP D + C RCG + H++ C +
Sbjct: 120 CFNCRKPGHGLADCPEADADREMGRGICYRCGSTEHEIHKCRAK---------------- 163
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
V+ ++ C+ CGQ+GHL C ++ + L + + C CG HF +
Sbjct: 164 ------VDPALGDYPYAKCFICGQTGHLSRSCPDNPKGLYAEGGS--CRLCGSVEHFQKD 215
Query: 586 C 586
C
Sbjct: 216 C 216
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 36/101 (35%), Gaps = 15/101 (14%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N C NC K H A C ++ C+ CGS +H C+ D
Sbjct: 116 NKMLCFNCRKPGHGLADCPEADADREMGRGICYRCGSTEHEIHKCRAKVDPALGDYPYAK 175
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
CFI + HL+ CP +G C CG H C
Sbjct: 176 CFICGQTGHLSRSCPDNPKGLYAEGGSCRLCGSVEHFQKDC 216
>gi|50304733|ref|XP_452322.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641455|emb|CAH01173.1| KLLA0C02805p [Kluyveromyces lactis]
Length = 156
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 44/170 (25%)
Query: 445 KPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHD 502
K C++CG H +C + C+ H+ S+C P T + C CG++GH
Sbjct: 4 KACYICGKLGHLASDCDSEKLCYNCNKPGHVQSECTVPKT-----VEFKQCYNCGETGHV 58
Query: 503 LSSCEGE--YHADDL--------------------KKIQCYICKSFGHLC--CVNSSIIG 538
+ C + Y+ D K+ CY C H+ C+ S
Sbjct: 59 KTECTVQKCYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLKS---- 114
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+ +CYNCGQ+GHL +C N ++ +CY C GH A+ C S
Sbjct: 115 --EPTCYNCGQAGHLSKDCQNG-------ENEKVCYNCNGVGHIAKDCSS 155
>gi|355729967|gb|AES10044.1| zinc finger, CCHC domain containing 9 [Mustela putorius furo]
Length = 270
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVDHFKKDCPES 229
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C ++D + +
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVDHFKKDCPESQNSDRMVTV 238
>gi|402224353|gb|EJU04416.1| hypothetical protein DACRYDRAFT_114745 [Dacryopinax sp. DJM-731
SS1]
Length = 356
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSN----------FCLRCGDSGHDLSSC-EGEYHADD 514
CF + H DCP G+ SN C RCG + H L C + E + D
Sbjct: 190 CFACRQPGHSVRDCPDI-SGSAAPSNTNKVALKGEALCYRCGSTQHTLGRCRKPELPSGD 248
Query: 515 LKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
L +C+IC GHL C N + + +C CG+ HL +C
Sbjct: 249 LPFAKCFICGGTGHLAGQCGKNKHGVYPRGGNCKVCGEVTHLAKDC 294
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 512 ADDLKKIQCYICKSFGH-----------LCCVNSSIIGLK-QVSCYNCGQSGHLGPECAN 559
AD + C+ C+ GH N++ + LK + CY CG + H C
Sbjct: 182 ADRQAQTICFACRQPGHSVRDCPDISGSAAPSNTNKVALKGEALCYRCGSTQHTLGRCRK 241
Query: 560 SCEALNGKKSNLICYKCGKEGHFARRCGSN 589
E +G C+ CG GH A +CG N
Sbjct: 242 P-ELPSGDLPFAKCFICGGTGHLAGQCGKN 270
>gi|146416071|ref|XP_001484005.1| hypothetical protein PGUG_03386 [Meyerozyma guilliermondii ATCC
6260]
Length = 175
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C +CG H C Q C+ CG F H KNC +G G AS G+
Sbjct: 53 CYSCGDLGHVQLDCPTSAQGAKCYNCGQFGHISKNCSEG-------GRPAAAST--GSAP 103
Query: 485 GNNLSSN--FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK 540
S N C +CG H C+ A LK CY C GH+ C G K
Sbjct: 104 APKFSKNGTTCYKCGGPNHFARDCQ----AGSLK---CYACGKAGHISKDCNAGGDAGAK 156
Query: 541 QVSCYNCGQSGHLGPEC 557
+CYNCG++GH+ +C
Sbjct: 157 --TCYNCGKAGHISRDC 171
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 53/126 (42%), Gaps = 28/126 (22%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---C 530
HLA +C T++ C C GH+ + C + QCY C GH+ C
Sbjct: 17 HLADNCQQTER-------LCYNCRKPGHESTECP---EPKQPSQKQCYSCGDLGHVQLDC 66
Query: 531 CVNSSIIGLKQVSCYNCGQSGHLGPECA----------NSCEALNGKKSNLICYKCGKEG 580
+S G K CYNCGQ GH+ C+ S A K+ CYKCG
Sbjct: 67 --PTSAQGAK---CYNCGQFGHISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGPN 121
Query: 581 HFARRC 586
HFAR C
Sbjct: 122 HFARDC 127
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 61/157 (38%), Gaps = 35/157 (22%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H NC+Q + C+ + H +++CP Q S C CGD GH
Sbjct: 9 CYKCGEVGHLADNCQQTERLCYNCRKPGHESTECPEPKQ---PSQKQCYSCGDLGHVQLD 65
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV----------------SCYNCGQ 549
C + +CY C FGH+ N S G +CY CG
Sbjct: 66 CP-----TSAQGAKCYNCGQFGHIS-KNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGG 119
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H +C + +L CY CGK GH ++ C
Sbjct: 120 PNHFARDC---------QAGSLKCYACGKAGHISKDC 147
>gi|85099515|ref|XP_960800.1| hypothetical protein NCU08933 [Neurospora crassa OR74A]
gi|28922325|gb|EAA31564.1| predicted protein [Neurospora crassa OR74A]
gi|28950135|emb|CAD70993.1| conserved hypothetical protein [Neurospora crassa]
Length = 449
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CG+ GH SC E + I+C+ C+ GH + I + + +C NCGQSGH
Sbjct: 239 CGNCGELGHIRKSCPEEGAEKEELVIKCFNCEEVGHR-IRDCPIPRVDKFACKNCGQSGH 297
Query: 553 LGPECAN--SCEALNGKKSNLI---------------CYKCGKEGHFARRC 586
+C S E + +K N + C CG+EGH A+ C
Sbjct: 298 RASDCTEPRSAEGVECRKCNEMGHFSKDCPQGGGPRGCRNCGQEGHMAKEC 348
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 78/224 (34%), Gaps = 46/224 (20%)
Query: 400 KYNVVLRMLLRKPRYFDPPGWNSET--------------------CSNCGKENHTAATCK 439
KY V R PR D W ++ C NCG+ H +C
Sbjct: 194 KYTVTYRFQWNPPRPRDRELWPADVAENLERLQDAGEVVSRGIPKCGNCGELGHIRKSCP 253
Query: 440 MQKQNKP-----CFLCGSFKHRWKNCKQGQ-DCFINKG---SEHLASDC--PGTDQGNNL 488
+ K CF C HR ++C + D F K S H ASDC P + +G
Sbjct: 254 EEGAEKEELVIKCFNCEEVGHRIRDCPIPRVDKFACKNCGQSGHRASDCTEPRSAEGVE- 312
Query: 489 SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCG 548
C +C + GH C C C GH+ + + V C NC
Sbjct: 313 ----CRKCNEMGHFSKDC-----PQGGGPRGCRNCGQEGHMAKECTEPKNMDNVQCRNCD 363
Query: 549 QSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
+ GH EC + K SN C + GH+ +C + D
Sbjct: 364 EFGHFSKECPKPRDITRVKCSN-----CQQMGHYKSKCPNPLVD 402
>gi|383858694|ref|XP_003704834.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Megachile
rotundata]
Length = 155
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 40/142 (28%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ C + H + CK+ QD C+ G H+A DC QG +S C C +GH S
Sbjct: 46 CYKCNQYGHFARECKEDQDLCYRCSGVGHIAKDC---QQGPEMS---CYNCNKTGHIARS 99
Query: 506 C-EGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEAL 564
C EG +D + SCYNC ++GH+ A +C
Sbjct: 100 CPEG---GNDSGR---------------------FAMQSCYNCNKTGHI----ARNCTEA 131
Query: 565 NGKKSNLICYKCGKEGHFARRC 586
GK CY CGK GH +R C
Sbjct: 132 GGK----TCYMCGKPGHISREC 149
>gi|223947177|gb|ACN27672.1| unknown [Zea mays]
gi|413932600|gb|AFW67151.1| hypothetical protein ZEAMMB73_637389 [Zea mays]
Length = 256
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 29/185 (15%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
R+P +F ++ TC+NC H AA C + C+ C H CK C
Sbjct: 62 CRRPGHFAKECPSAPTCNNCNLPGHFAAECTSKTV---CWNCKEPGHIASECKNEALCHT 118
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
+ HLA DCP G N+ C +C SGH C E ++ C+ GH
Sbjct: 119 CNKTGHLARDCP--TSGANVK--LCNKCFKSGHIAVDCTNERACNN--------CRQPGH 166
Query: 529 LC--CVNSSIIGLKQVSCYNCGQSGHLGPEC-----ANSCEALNGKKSNLICYKCGKEGH 581
+ C N + L C SGH+ C A+ G +++C CG+ GH
Sbjct: 167 IARECKNDPVCNL-------CNVSGHVARVCPKTTLASEIHIQGGPFRDILCRICGQPGH 219
Query: 582 FARRC 586
+R C
Sbjct: 220 ISRNC 224
>gi|410948894|ref|XP_003981162.1| PREDICTED: zinc finger CCHC domain-containing protein 9 [Felis
catus]
Length = 271
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPES 229
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C ++D + +
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPESQNSDRMVTV 238
>gi|296485065|tpg|DAA27180.1| TPA: zinc finger, CCHC domain containing 9 [Bos taurus]
gi|440898449|gb|ELR49947.1| Zinc finger CCHC domain-containing protein 9 [Bos grunniens mutus]
Length = 271
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + + + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H+ +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPES 229
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C + H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C ++D + +
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPESQNSDRVVTV 238
>gi|225465385|ref|XP_002273825.1| PREDICTED: zinc finger protein GIS2-like [Vitis vinifera]
Length = 158
Score = 49.7 bits (117), Expect = 0.005, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 51/131 (38%), Gaps = 28/131 (21%)
Query: 458 KNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKK 517
+N Q C K H A DCP NN CG GH + C
Sbjct: 44 QNLTQDYLCNKCKRPGHFARDCPNVTVCNN--------CGLPGHIAAECN--------ST 87
Query: 518 IQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
C+ CK GHL C N + C+ CG+ GHL +C SC +L + L C
Sbjct: 88 TICWNCKESGHLASQCPNDLV-------CHMCGKMGHLARDC--SCPSLPTHDARL-CNN 137
Query: 576 CGKEGHFARRC 586
C K GH A C
Sbjct: 138 CYKPGHIATDC 148
Score = 38.9 bits (89), Expect = 7.6, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
Query: 410 RKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFIN 469
++P +F N C+NCG H AA C C+ C H C C +
Sbjct: 56 KRPGHFARDCPNVTVCNNCGLPGHIAAEC---NSTTICWNCKESGHLASQCPNDLVCHMC 112
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE 509
HLA DC + + C C GH + C E
Sbjct: 113 GKMGHLARDCSCPSLPTH-DARLCNNCYKPGHIATDCTNE 151
>gi|426230074|ref|XP_004023537.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCHC domain-containing
protein 9 [Ovis aries]
Length = 271
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + + + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H+ +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPES 229
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C + H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C ++D + +
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPESQNSDRMVTV 238
>gi|342888969|gb|EGU88180.1| hypothetical protein FOXB_01318 [Fusarium oxysporum Fo5176]
Length = 223
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 68/194 (35%), Gaps = 41/194 (21%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL--CYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEY-----------------------HADDL 515
CP +S C CG GH +C A
Sbjct: 66 CPTLRLSGTGTSGRCYNCGQPGHLARACPNPVGPTMGRGAPMGRGGFPGGYGRGGFAGGP 125
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---I 572
+ CY C H + + + CY CG+ GH+ + C A NG N
Sbjct: 126 RPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAGKT 177
Query: 573 CYKCGKEGHFARRC 586
CY+CG+ GH +R C
Sbjct: 178 CYQCGEAGHISRDC 191
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 52/145 (35%), Gaps = 47/145 (32%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEG-------------EYHADDLKKI----QCYICKSFGH 528
++LS C +CG+ GH C E + L + QCY C+ GH
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGH 61
Query: 529 LCCVNSSIIGLKQVS------CYNCGQSGHLGPECANSCEALNGKKSNL----------- 571
V + L+ CYNCGQ GHL C N G+ + +
Sbjct: 62 ---VQADCPTLRLSGTGTSGRCYNCGQPGHLARACPNPVGPTMGRGAPMGRGGFPGGYGR 118
Query: 572 ----------ICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 119 GGFAGGPRPATCYKCGGPNHFARDC 143
>gi|201067640|gb|ACH92926.1| vasa protein [Parhyale hawaiensis]
Length = 707
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 9/104 (8%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC-------CVNSSIIGLKQVSCY 545
C +CG+ GH C + C+ C GH+ + G C+
Sbjct: 56 CRKCGEEGHRAFECTSGGGGGGNRA--CFKCGEEGHMSRECPQGGGQSFGGGGGGNRGCF 113
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
CG+ GH+ +C NS G C+KCG+EGH +R C S+
Sbjct: 114 KCGEEGHMSRDCPNSVNGGGGASGGKGCFKCGEEGHMSRDCPSS 157
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 58/157 (36%), Gaps = 25/157 (15%)
Query: 425 CSNCGKENHTAATCK---MQKQNKPCFLCGSFKHRWKNCKQ------------GQDCFIN 469
C CG+E H A C N+ CF CG H + C Q + CF
Sbjct: 56 CRKCGEEGHRAFECTSGGGGGGNRACFKCGEEGHMSRECPQGGGQSFGGGGGGNRGCFKC 115
Query: 470 KGSEHLASDCPGT--DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFG 527
H++ DCP + G C +CG+ GH C + + C+ C G
Sbjct: 116 GEEGHMSRDCPNSVNGGGGASGGKGCFKCGEEGHMSRDCPS---SGNGGGKGCFKCGEDG 172
Query: 528 HLC--CVNSSIIGLKQV---SCYNCGQSGHLGPECAN 559
H+ C G C+NCG+ GH +C N
Sbjct: 173 HMARDCPQGGDGGGGGGGNRGCFNCGEQGHNKADCPN 209
>gi|363744931|ref|XP_424418.3| PREDICTED: zinc finger CCHC domain-containing protein 7 [Gallus
gallus]
Length = 348
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 58/152 (38%), Gaps = 46/152 (30%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTD 483
TC NCG+ H + C + K+ PC LC +G HL + CP
Sbjct: 42 TCRNCGRPGHLSKNCPVPKKTPPCCLCA-----------------ERG--HLQNTCP--- 79
Query: 484 QGNNLSSNFCLRCGDSGHDLSSC---------------EGEYHADDLKKI--QCYICKSF 526
+ FCL C GH C +G Y AD +I Q ++ +
Sbjct: 80 ------ARFCLNCCLPGHYFRECLERSYWNKHCSRCDMKGHY-ADACPEIWRQYHLTTNP 132
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
G + +S V CYNC + GH G EC+
Sbjct: 133 GPIKAASSHSEHSAAVYCYNCSRKGHFGYECS 164
>gi|326927837|ref|XP_003210095.1| PREDICTED: cellular nucleic acid-binding protein-like [Meleagris
gallopavo]
Length = 149
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG---------------EYHADDLKKIQCYICKSFGHLCCV 532
+SSN C +CG +GH C ++ + L I CY C GHL
Sbjct: 1 MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDI-CYRCGESGHL--- 56
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ L++ +CYNCG+ GH+ +C ++ CY CGK GH AR C
Sbjct: 57 -AKDCDLQEDACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARDC 104
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKG-SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG H K+C +D N G H+A DC + C CG GH
Sbjct: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC---KEPKREREQCCYNCGKPGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
C+ HAD+ K CY C FGH+ +V CY CG+SGHL EC
Sbjct: 104 CD---HADEQK---CYSCGEFGHI------QKDCTKVKCYRCGESGHLAREC 143
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 491 NFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQS 550
+ C RCG+SGH C DL++ CY C GH+ ++ CYNCG+
Sbjct: 45 DICYRCGESGHLAKDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKP 97
Query: 551 GHLGPEC-------ANSCEALNGKKSNLI---CYKCGKEGHFARRC 586
GHL +C SC + + CY+CG+ GH AR C
Sbjct: 98 GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGESGHLAREC 143
>gi|116784713|gb|ABK23446.1| unknown [Picea sitchensis]
Length = 243
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 79/210 (37%), Gaps = 44/210 (20%)
Query: 391 EDARKENEAKYNVVLRMLLRK-----PRYFDPPGWNS------ETCSNCGKENHTAATCK 439
E +R+ + +VV R R+ P D G+ E C+NC + H A C
Sbjct: 6 EGSRRGRRIQSDVVGRRTFRRSEPYRPYPHDRNGYGPRSSRPVELCNNCKRTGHYARECP 65
Query: 440 MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDS 499
C CG H C + Q C K HLA+DC + C CG +
Sbjct: 66 NASV---CNNCGVSGHIASKCPKEQLCRNCKKPGHLAADC--------RNEPVCNMCGKT 114
Query: 500 GHDLSSCEGEYHADDLKK-IQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPE 556
GH C H L K C C GH+ C N +C NC Q+GHL +
Sbjct: 115 GHLAKECSA--HELGLPKSALCKKCYLPGHIMADCPNDK-------ACNNCRQTGHLARD 165
Query: 557 CANSCEALNGKKSNLICYKCGKEGHFARRC 586
C NS +C CG+ GH R C
Sbjct: 166 CVNS----------PVCNGCGEPGHLVRDC 185
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 21/140 (15%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
N+ C+NCG H A+ C ++ C C H +C+ C + + HLA +C
Sbjct: 66 NASVCNNCGVSGHIASKCPKEQL---CRNCKKPGHLAADCRNEPVCNMCGKTGHLAKECS 122
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIG 538
+ G S+ C +C GH ++ C + ++ C+ GHL CVNS +
Sbjct: 123 AHELGLPKSA-LCKKCYLPGHIMADCPNDKACNN--------CRQTGHLARDCVNSPV-- 171
Query: 539 LKQVSCYNCGQSGHLGPECA 558
C CG+ GHL +C
Sbjct: 172 -----CNGCGEPGHLVRDCP 186
>gi|156544377|ref|XP_001607405.1| PREDICTED: hypothetical protein LOC100123711 [Nasonia vitripennis]
Length = 531
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 464 QDCFINKGSEHLASDCP--GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCY 521
Q CF + + H SDCP G ++ + C +CG + H C+ +DD + +C+
Sbjct: 392 QVCFHCRKAGHNLSDCPELGKEEA---GTGICFKCGSTEHTHFECKVN-KSDDYRYAKCF 447
Query: 522 ICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
IC+ GH+ C N + SC CG HL +C +
Sbjct: 448 ICREQGHIAKQCPDNPKGLYPDGGSCKICGDVTHLKKDCPD 488
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQ 549
C C +GH+LS C E ++ C+ C S H C VN S + C+ C +
Sbjct: 394 CFHCRKAGHNLSDC-PELGKEEAGTGICFKCGSTEHTHFECKVNKSD-DYRYAKCFICRE 451
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFT 602
GH+ +C ++ + L + C CG H + C K++ + L T
Sbjct: 452 QGHIAKQCPDNPKGLYPDGGS--CKICGDVTHLKKDCPDLVKEKEETAITLDT 502
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 423 ETCSNCGKENHTAATC----KMQKQNKPCFLCGSFKHRWKNCKQGQD-------CFINKG 471
+ C +C K H + C K + CF CGS +H CK + CFI +
Sbjct: 392 QVCFHCRKAGHNLSDCPELGKEEAGTGICFKCGSTEHTHFECKVNKSDDYRYAKCFICRE 451
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
H+A CP +G C CGD H C
Sbjct: 452 QGHIAKQCPDNPKGLYPDGGSCKICGDVTHLKKDC 486
>gi|147854282|emb|CAN79118.1| hypothetical protein VITISV_005773 [Vitis vinifera]
Length = 1368
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 48/135 (35%), Gaps = 52/135 (38%)
Query: 464 QDCFINKGSE--HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCY 521
QD NK H A DCP NN CG GH + C
Sbjct: 884 QDYLCNKCKRPGHFARDCPNVTVCNN--------CGLPGHIAAEC--------------- 920
Query: 522 ICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
NS+ I C+NC +S HL +C N + +C+ CGK GH
Sbjct: 921 -----------NSTTI------CWNCKESRHLASQCPN----------DPVCHMCGKMGH 953
Query: 582 FARRCGSNFKDRLRI 596
AR C +D L I
Sbjct: 954 LARDCSCPARDSLHI 968
>gi|154345720|ref|XP_001568797.1| universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066139|emb|CAM43929.1| universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|449310608|gb|AGE92531.1| universal minicircle sequence binding protein [Leishmania
braziliensis]
Length = 115
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ + H++ CP ++ C CG++GH C E K C+ C S
Sbjct: 6 CYKCGEAGHMSRSCPRV-----AATRSCYNCGETGHMSRDCPSE-----RKPKSCFNCGS 55
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFA 583
HL C N + G SCYNCG +GH+ +C N ++ CY CG H +
Sbjct: 56 TEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPN-------ERKPKSCYNCGSTEHLS 108
Query: 584 RRC 586
R C
Sbjct: 109 REC 111
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNC 547
+S+ C +CG++GH SC CY C GH+ K SC+NC
Sbjct: 1 MSALTCYKCGEAGHMSRSC-----PRVAATRSCYNCGETGHM--SRDCPSERKPKSCFNC 53
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + HL EC N EA G + CY CG GH +R C
Sbjct: 54 GSTEHLSRECTN--EAKAGADTR-SCYNCGGTGHMSRDC 89
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQD---CFINKGSEH 474
+ +C NCG+ H + C +++ K CF CGS +H + C K G D C+ G+ H
Sbjct: 25 TRSCYNCGETGHMSRDCPSERKPKSCFNCGSTEHLSRECTNEAKAGADTRSCYNCGGTGH 84
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGH 501
++ DCP N C CG + H
Sbjct: 85 MSRDCP-----NERKPKSCYNCGSTEH 106
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 52/137 (37%), Gaps = 33/137 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC---KQGQDCFINKGSEHLASDCP 480
TC CG+ H + +C + C+ CG H ++C ++ + CF +EHL+ +C
Sbjct: 5 TCYKCGEAGHMSRSCPRVAATRSCYNCGETGHMSRDCPSERKPKSCFNCGSTEHLSRECT 64
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
+ + C CG +GH C E K
Sbjct: 65 NEAKA-GADTRSCYNCGGTGHMSRDCPNE-----------------------------RK 94
Query: 541 QVSCYNCGQSGHLGPEC 557
SCYNCG + HL EC
Sbjct: 95 PKSCYNCGSTEHLSREC 111
>gi|63014536|gb|AAY25700.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A SC A K C+KCGKEGH + C +NF RL
Sbjct: 382 GQKRIKCFNCGKEGHL----ARSCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 433
Query: 595 RISD 598
S+
Sbjct: 434 WPSN 437
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A +C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 388 CFNCGKEGHLARSCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 432
>gi|57084761|ref|XP_536305.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Canis lupus familiaris]
Length = 271
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPES 229
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C ++D + +
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPESQNSDRMVTV 238
>gi|115385941|ref|XP_001209517.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114187964|gb|EAU29664.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 184
Score = 49.3 bits (116), Expect = 0.006, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 55/162 (33%), Gaps = 37/162 (22%)
Query: 434 TAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFC 493
T C + + K C+ CG+ H + C Q G C
Sbjct: 49 TCRECTVAPKEKSCYRCGTTGHISRECPQAAGE---------------GYGGGAPGGQEC 93
Query: 494 LRCGDSGHDLSSC-------EGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSC 544
+CG GH +C G ++ CY C FGH+ C + C
Sbjct: 94 YKCGRVGHIARNCPQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTHGQ-------KC 146
Query: 545 YNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
YNCG+ GH+ +C K +CY C + GH C
Sbjct: 147 YNCGEVGHVSRDCPTEA------KGERVCYNCKQPGHVQAAC 182
Score = 48.5 bits (114), Expect = 0.012, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 16/96 (16%)
Query: 423 ETCSNCGKENHTAATCKMQK------------QNKPCFLCGSFKHRWKNCKQGQDCFINK 470
+ C CG+ H A C + + C+ CG F H ++C GQ C+
Sbjct: 91 QECYKCGRVGHIARNCPQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTHGQKCYNCG 150
Query: 471 GSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
H++ DCP +G + C C GH ++C
Sbjct: 151 EVGHVSRDCPTEAKGERV----CYNCKQPGHVQAAC 182
Score = 44.3 bits (103), Expect = 0.18, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 24/113 (21%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKI----QCYICKSFGHLC----------CVNSSIIG 538
C RCG +GH C +CY C GH+ G
Sbjct: 62 CYRCGTTGHISRECPQAAGEGYGGGAPGGQECYKCGRVGHIARNCPQGGSYGGGFGGGYG 121
Query: 539 LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK 591
+Q +CY+CG GH+ +C +G+K CY CG+ GH +R C + K
Sbjct: 122 GRQQTCYSCGGFGHMARDCT------HGQK----CYNCGEVGHVSRDCPTEAK 164
>gi|10039329|dbj|BAB13307.1| vasa-related protein CnVAS1 [Hydra vulgaris]
Length = 797
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 55/166 (33%), Gaps = 57/166 (34%)
Query: 424 TCSNCGKENHTAATCK---MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
C CGKE H + C + CF C K H++ DCP
Sbjct: 70 ACHKCGKEGHMSRECPDGGGGGGGRACFKC-------------------KQEGHMSRDCP 110
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
QG + C +CG GH C G
Sbjct: 111 ---QGGSGGGRACHKCGKEGHMSRECPDG----------------------------GGG 139
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+C+ C Q GH+ +C +G + C+KCGKEGH +R C
Sbjct: 140 GRACFKCKQEGHMSKDCPQG----SGGGGSRTCHKCGKEGHMSREC 181
>gi|406606389|emb|CCH42163.1| Gag-Pol polyprotein [Wickerhamomyces ciferrii]
Length = 180
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 67/176 (38%), Gaps = 46/176 (26%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C++CG H + C Q + C+ H A+DCP Q C CG GH S+
Sbjct: 9 CYVCGQAGHLAEACTQEERLCYNCSNPGHQANDCPEPRQDTQKQ---CYGCGGVGHVQSN 65
Query: 506 CEGEYHADDLKKIQCYICKSFGHLC--CV------------------NSSIIGLKQ---- 541
C + K +CY C FGH+ C N + K
Sbjct: 66 C-----TEQAKGTRCYNCSQFGHISKECPEPQQERPQRSFNQRPRSNNKATTCYKCGGPN 120
Query: 542 ----------VSCYNCG-QSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
V CY CG Q GHL +C ++ +N S CYKCG GH +R C
Sbjct: 121 HFARDCQAGVVKCYACGSQDGHLAKDCTSASGGVN--TSTKTCYKCGDVGHISRDC 174
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 60/153 (39%), Gaps = 27/153 (17%)
Query: 425 CSNCGKENHTAATCKMQKQN--KPCFLCGSFKHRWKNCKQ---GQDCFINKGSEHLASDC 479
C NC H A C +Q+ K C+ CG H NC + G C+ H++ +C
Sbjct: 29 CYNCSNPGHQANDCPEPRQDTQKQCYGCGGVGHVQSNCTEQAKGTRCYNCSQFGHISKEC 88
Query: 480 PGTDQG-----------NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSF-G 527
P Q +N + C +CG H C+ ++CY C S G
Sbjct: 89 PEPQQERPQRSFNQRPRSNNKATTCYKCGGPNHFARDCQ-------AGVVKCYACGSQDG 141
Query: 528 HL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
HL C S + +CY CG GH+ +C
Sbjct: 142 HLAKDCTSASGGVNTSTKTCYKCGDVGHISRDC 174
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 425 CSNCGKENHTAATCKMQKQNKP----------------CFLCGSFKHRWKNCKQGQDCFI 468
C NC + H + C +Q +P C+ CG H ++C+ G
Sbjct: 75 CYNCSQFGHISKECPEPQQERPQRSFNQRPRSNNKATTCYKCGGPNHFARDCQAGVVKCY 134
Query: 469 NKGSE--HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE 509
GS+ HLA DC G N S+ C +CGD GH C GE
Sbjct: 135 ACGSQDGHLAKDCTSASGGVNTSTKTCYKCGDVGHISRDCRGE 177
>gi|315044853|ref|XP_003171802.1| hypothetical protein MGYG_06345 [Arthroderma gypseum CBS 118893]
gi|311344145|gb|EFR03348.1| hypothetical protein MGYG_06345 [Arthroderma gypseum CBS 118893]
Length = 192
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 72/199 (36%), Gaps = 58/199 (29%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG + H + C + K C+ CG + H+
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTQPPKEKSCYRCGM-------------------TGHI 62
Query: 476 ASDCPGTDQGNN----------LSSNFCLRCGDSGHDLSSCEGE---------------- 509
+ +CP + G+N C +CG GH +C +
Sbjct: 63 SRECPSSGSGDNNYSGGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGS 122
Query: 510 --YHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGK 567
+ + CY C +GH+ G K CYNCG+ GH+ +C EA
Sbjct: 123 YGGGSYGGRSQTCYSCGGYGHM--ARDCTQGQK---CYNCGEVGHVSRDCPT--EA---- 171
Query: 568 KSNLICYKCGKEGHFARRC 586
K +CYKC + GH C
Sbjct: 172 KGERVCYKCKQAGHVQAAC 190
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 30/175 (17%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG---QDCFINKGSEHLASDCPG 481
C NCG+ +H A C +K C+ CG H + C Q + C+ + H++ +CP
Sbjct: 10 CFNCGESSHQARDCP-KKGTPTCYNCGGQGHVSRECTQPPKEKSCYRCGMTGHISRECPS 68
Query: 482 TDQGNN----------LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
+ G+N C +CG GH +C + + S
Sbjct: 69 SGSGDNNYSGGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGS------ 122
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + +CY+CG GH+ +C G+K CY CG+ GH +R C
Sbjct: 123 YGGGSYGGRSQTCYSCGGYGHMARDC------TQGQK----CYNCGEVGHVSRDC 167
>gi|294470716|gb|ADE80750.1| cold shock domain protein 3 [Eutrema salsugineum]
Length = 295
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKI----QCYICKSFGHLCCVNSS----IIGLKQVSC 544
C CGD GH C D CY C FGH+ V +S G +C
Sbjct: 192 CYMCGDVGHFARDCRQNVGGDVGGGGGGGNTCYTCGGFGHMARVCTSKRPSGGGGGVGAC 251
Query: 545 YNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
Y CG GHL +C G + C+ CGKEGHFAR C S
Sbjct: 252 YECGGIGHLARDCDR--RGSGGGSGSSKCFTCGKEGHFARECSS 293
>gi|408398051|gb|EKJ77187.1| hypothetical protein FPSE_02637 [Fusarium pseudograminearum CS3096]
Length = 435
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 69/189 (36%), Gaps = 58/189 (30%)
Query: 425 CSNCGKENHTAATC---KMQKQNKP---CFLCGSFKHRWKNCKQGQDCFINKGSEHLASD 478
C+NC + H + C KM++ + P C+ CG+ HR ++C + +
Sbjct: 244 CNNCKELGHVSKFCTQEKMERTDGPKISCYNCGADGHRVRDCPEPR-------------- 289
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC-------- 530
+ N C CG SGH ++ CE + ++C C GH
Sbjct: 290 ---------IDKNACKNCGKSGHKVADCE---EPPNPANVECRKCSEVGHFAKDCPQGGG 337
Query: 531 --CVNSSIIG-----------LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
C N G + V+C NC Q GH EC L S + C C
Sbjct: 338 RACRNCGQEGHMAKECDQPRDMSTVTCRNCEQQGHYSKEC-----PLPRDWSKVQCSNCQ 392
Query: 578 KEGHFARRC 586
+ GH RC
Sbjct: 393 EYGHTKVRC 401
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 424 TCSNCGKENHTAATCK--MQKQNKPCFLCGSFKHRWKNCKQGQD-CFINKGSE-HLASDC 479
C NCGK H A C+ N C C H K+C QG N G E H+A +C
Sbjct: 294 ACKNCGKSGHKVADCEEPPNPANVECRKCSEVGHFAKDCPQGGGRACRNCGQEGHMAKEC 353
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
DQ ++S+ C C GH C D K+QC C+ +GH
Sbjct: 354 ---DQPRDMSTVTCRNCEQQGHYSKECP---LPRDWSKVQCSNCQEYGH 396
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 15/140 (10%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-PCFLCGSFKHRWKNCKQGQ-----DCFINKGSEHLAS 477
+C NCG + H C + +K C CG H+ +C++ +C H A
Sbjct: 271 SCYNCGADGHRVRDCPEPRIDKNACKNCGKSGHKVADCEEPPNPANVECRKCSEVGHFAK 330
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DCP QG + C CG GH C+ D+ + C C+ GH
Sbjct: 331 DCP---QGGGRA---CRNCGQEGHMAKECD---QPRDMSTVTCRNCEQQGHYSKECPLPR 381
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V C NC + GH C
Sbjct: 382 DWSKVQCSNCQEYGHTKVRC 401
>gi|367023629|ref|XP_003661099.1| hypothetical protein MYCTH_2300115 [Myceliophthora thermophila ATCC
42464]
gi|347008367|gb|AEO55854.1| hypothetical protein MYCTH_2300115 [Myceliophthora thermophila ATCC
42464]
Length = 705
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 49/134 (36%), Gaps = 27/134 (20%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C + +H A++CP T C CGD+GH C +++C CK
Sbjct: 439 CHMCASRDHDATECPET---------ACRFCGDAGHRSFGCP--------TRLRCTKCKQ 481
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECA--------NSCEALNGKKSNLICYK 575
GH C + +V C C H+ C N + + CY
Sbjct: 482 LGHQKKDCSEKLALPPDEVECIFCQSRDHVDASCHEIWRSFKFNPATVRRVRSLPVFCYC 541
Query: 576 CGKEGHFARRCGSN 589
CG EGH+ CG N
Sbjct: 542 CGSEGHYGPACGLN 555
>gi|301761700|ref|XP_002916268.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Ailuropoda melanoleuca]
gi|281350303|gb|EFB25887.1| hypothetical protein PANDA_004333 [Ailuropoda melanoleuca]
Length = 271
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C + +
Sbjct: 125 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCRAKVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H +C S
Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPES 229
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H C+ D
Sbjct: 126 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCRAKVDPALGEFPFAK 185
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C ++D + +
Sbjct: 186 CFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPESQNSDRMVTV 238
>gi|145238910|ref|XP_001392102.1| cellular nucleic acid-binding protein [Aspergillus niger CBS
513.88]
gi|134076603|emb|CAK45156.1| unnamed protein product [Aspergillus niger]
Length = 171
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 63/174 (36%), Gaps = 29/174 (16%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG + H + C + + K C+ CG H + C+
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGGVGHISRECQASPA---------- 71
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE---GEYHADDLKKIQCYICKSFGHLCCV 532
C +CG GH +C G ++ CY C FGH+
Sbjct: 72 -----EGFGAAAGGGQECYKCGRVGHIARNCPQSGGYSGGFGGRQQTCYSCGGFGHM--A 124
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G K CYNCG+ GH+ +C K +CY C + GH C
Sbjct: 125 RDCTNGQK---CYNCGEVGHVSRDCPTE------AKGERVCYNCKQPGHVQAAC 169
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 66/159 (41%), Gaps = 27/159 (16%)
Query: 440 MQKQNKPCFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCG 497
Q + CF CG H+ ++C K C+ G H++ +C + C RCG
Sbjct: 3 FQAGGRGCFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTVAPK-----EKSCYRCG 57
Query: 498 DSGHDLSSCEGEYHADDLKKI----QCYICKSFGHLC--C----VNSSIIGLKQVSCYNC 547
GH C+ +CY C GH+ C S G +Q +CY+C
Sbjct: 58 GVGHISRECQASPAEGFGAAAGGGQECYKCGRVGHIARNCPQSGGYSGGFGGRQQTCYSC 117
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G GH+ +C NG+K CY CG+ GH +R C
Sbjct: 118 GGFGHMARDC------TNGQK----CYNCGEVGHVSRDC 146
>gi|448510245|ref|XP_003866311.1| hypothetical protein CORT_0A04830 [Candida orthopsilosis Co 90-125]
gi|380350649|emb|CCG20871.1| hypothetical protein CORT_0A04830 [Candida orthopsilosis Co 90-125]
Length = 401
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 62/169 (36%), Gaps = 57/169 (33%)
Query: 413 RYF---DPPGWNSET----CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD 465
RYF DP N ++ C NC + H A CK+ C CG
Sbjct: 72 RYFGVIDPDNENQQSSGPICDNCQERGHRRAQCKVVI----CHKCG-------------- 113
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
K +H S CP S+ CLRCG+ GH +S C+ + K+ C C +
Sbjct: 114 ----KVGDHYESQCP--------STVVCLRCGEKGHYISQCKSKVR----KRQYCRSCDT 157
Query: 526 FGHLCCVNSSI----------------IGLKQVSCYNCGQSGHLGPECA 558
F H SI + L + CYNCG H G EC
Sbjct: 158 FQHGDEDCPSIWRSYLTKRTANEDEESLVLPNIYCYNCGSDEHFGDECG 206
>gi|336268999|ref|XP_003349261.1| hypothetical protein SMAC_05545 [Sordaria macrospora k-hell]
gi|380089834|emb|CCC12367.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 436
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CG+ GH SC E + I+C+ C GH + I + + +C NCGQ+GH
Sbjct: 234 CGNCGELGHIRKSCPEEPEQKEEVVIKCFNCDEVGHR-IRDCPIPRVDKFACKNCGQNGH 292
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+C A N+ C KC + GHF++ C
Sbjct: 293 KVADCTEPRSA-----ENVECRKCNETGHFSKDC 321
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 43/222 (19%)
Query: 400 KYNVVLRMLLRKPRYFDPPGWNSET--------------------CSNCGKENHTAATCK 439
KY V R PR D W ++ C NCG+ H +C
Sbjct: 189 KYTVTYRFNWNPPRPRDRDLWPADVAENLERLQDAGEVVAHGIPKCGNCGELGHIRKSCP 248
Query: 440 MQKQNKP-----CFLCGSFKHRWKNCKQGQ-DCFINKG---SEHLASDCPGTDQGNNLSS 490
+ + K CF C HR ++C + D F K + H +DC N+
Sbjct: 249 EEPEQKEEVVIKCFNCDEVGHRIRDCPIPRVDKFACKNCGQNGHKVADCTEPRSAENVE- 307
Query: 491 NFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQS 550
C +C ++GH C C C GH+ + + V C NC +
Sbjct: 308 --CRKCNETGHFSKDCP------KTGPRGCRNCGQEGHMSKECTEPKNMDNVQCRNCDEM 359
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
GH EC + K SN C + GH+ +C + D
Sbjct: 360 GHFSKECPKPRDITRVKCSN-----CQEMGHYKSKCPNPLVD 396
>gi|254667068|gb|ACT76468.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 374 AHIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 425
Query: 587 G---SNFKDRLRISD 598
+NF RL S+
Sbjct: 426 TERQANFLGRLWPSN 440
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 391 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 435
>gi|254667062|gb|ACT76464.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 372 AHIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 423
Query: 587 G---SNFKDRLRISD 598
+NF RL S+
Sbjct: 424 TERQANFLGRLWPSN 438
>gi|341875989|gb|EGT31924.1| hypothetical protein CAEBREN_06592 [Caenorhabditis brenneri]
Length = 395
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 484 QGNNLSSNFCLRCGDSGHDLSSC--EGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGL 539
Q ++ + C C + GH L+ C H+D + C+ C S H C + G
Sbjct: 226 QEQKITGSACFHCREPGHRLADCPKRNSSHSDGV----CFKCGSMEHSIHECKKKGVKGF 281
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSN-LICYKCGKEGHFARRC 586
+C+ C Q GH+ +C + LNG + C CG GH R C
Sbjct: 282 PFATCFVCKQVGHISRDCHQN---LNGVYPDGGACNVCGAVGHLKRDC 326
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 424 TCSNCGKENHTAATCKMQKQNKP---CFLCGSFKHRWKNCKQG-------QDCFINKGSE 473
C +C + H A C + + CF CGS +H CK+ CF+ K
Sbjct: 234 ACFHCREPGHRLADCPKRNSSHSDGVCFKCGSMEHSIHECKKKGVKGFPFATCFVCKQVG 293
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
H++ DC G C CG GH C
Sbjct: 294 HISRDCHQNLNGVYPDGGACNVCGAVGHLKRDC 326
>gi|259128239|gb|ACV94875.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C AL K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRALRKKG----CWKCGKEGHQMKDCTERQANFLGRI 435
Query: 595 RISD 598
S
Sbjct: 436 WPSS 439
>gi|126321496|ref|XP_001363296.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Monodelphis domestica]
Length = 262
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K + C+ + H +DCP + ++ + C RCG + H+++ C+ +
Sbjct: 116 KNAKVCYHCRKQGHGVADCPAVLESQDMGTGICYRCGSTEHEITKCKAK----------- 164
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
V+ ++ C+ CG+ GHL C ++ + L + C CG
Sbjct: 165 -----------VDPAMGEFPFAKCFICGEMGHLSRSCPDNPKGLYAEGGG--CRLCGSVE 211
Query: 581 HFARRCGSN 589
HF + C N
Sbjct: 212 HFKKDCPEN 220
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N++ C +C K+ H A C +++ C+ CGS +H CK D
Sbjct: 117 NAKVCYHCRKQGHGVADCPAVLESQDMGTGICYRCGSTEHEITKCKAKVDPAMGEFPFAK 176
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CFI HL+ CP +G C CG H C ++D + +
Sbjct: 177 CFICGEMGHLSRSCPDNPKGLYAEGGGCRLCGSVEHFKKDCPENQNSDHMVTV 229
>gi|395511351|ref|XP_003759923.1| PREDICTED: zinc finger CCHC domain-containing protein 9
[Sarcophilus harrisii]
Length = 262
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
+ Q C+ + H +DCP + ++ + C RCG + H+++ C+ +
Sbjct: 116 RNSQVCYHCRKPGHGIADCPAVLESQDIGTGICYRCGSTEHEITKCKAK----------- 164
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
V+ ++ C+ CG+ GHL C ++ + L + C CG
Sbjct: 165 -----------VDPAMGEFPFAKCFICGEMGHLSRSCPDNPKGLYAEGGG--CRLCGSVE 211
Query: 581 HFARRCGSN 589
HF + C N
Sbjct: 212 HFKKDCPEN 220
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
NS+ C +C K H A C +++ C+ CGS +H CK D
Sbjct: 117 NSQVCYHCRKPGHGIADCPAVLESQDIGTGICYRCGSTEHEITKCKAKVDPAMGEFPFAK 176
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CFI HL+ CP +G C CG H C ++D++ +
Sbjct: 177 CFICGEMGHLSRSCPDNPKGLYAEGGGCRLCGSVEHFKKDCPENQNSDNMVTV 229
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 520 CYICKSFGHLCCVNSSIIGLKQVS---CYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
CY C+ GH +++ + + CY CG + H +C + G+ C+ C
Sbjct: 121 CYHCRKPGHGIADCPAVLESQDIGTGICYRCGSTEHEITKCKAKVDPAMGEFPFAKCFIC 180
Query: 577 GKEGHFARRCGSNFK 591
G+ GH +R C N K
Sbjct: 181 GEMGHLSRSCPDNPK 195
>gi|426200376|gb|EKV50300.1| hypothetical protein AGABI2DRAFT_115358 [Agaricus bisporus var.
bisporus H97]
Length = 369
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G +C + G+K + C+ CGK GH A+ C SN R+R
Sbjct: 296 CHKCGKFGHIGKDCEEKKKNF-GEKKSFKCFSCGKFGHIAKNCRSNRSGRIR 346
>gi|426194239|gb|EKV44171.1| hypothetical protein AGABI2DRAFT_121363 [Agaricus bisporus var.
bisporus H97]
Length = 369
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G +C + G+K + C+ CGK GH A+ C SN R+R
Sbjct: 296 CHKCGKFGHIGKDCKEKKKNF-GEKKSFKCFSCGKFGHIAKNCRSNRSGRIR 346
>gi|344272696|ref|XP_003408167.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Loxodonta africana]
Length = 270
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 124 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 183
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H +C S
Sbjct: 184 KCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHYKKDCPES 228
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 125 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 184
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C ++D + +
Sbjct: 185 CFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHYKKDCPESKNSDQIVTV 237
>gi|116197715|ref|XP_001224669.1| hypothetical protein CHGG_07013 [Chaetomium globosum CBS 148.51]
gi|88178292|gb|EAQ85760.1| hypothetical protein CHGG_07013 [Chaetomium globosum CBS 148.51]
Length = 200
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 71/161 (44%), Gaps = 34/161 (21%)
Query: 447 CFLCGSFKHRWKNCKQG----QDCFINKGSEHLASDCPGTDQGNNLSSNF----CLRCGD 498
C+ CG H ++C +G + C+ H++ +CP TD G S C +CG+
Sbjct: 51 CYNCGGEGHMSRDCPEGPKDTKTCYRCGQPGHISRNCP-TDGGGGHSGGQSGAECYKCGE 109
Query: 499 SGHDLSSCE-----------GEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCY 545
GH +C G + + CY C GH+ CVN S CY
Sbjct: 110 IGHIARNCSKGNAYGGGYGGGGFGGGGYGQKTCYSCGGVGHVSRDCVNGS-------KCY 162
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
NCG SGH+ +C E+ G+K ICYKC + GH +C
Sbjct: 163 NCGVSGHVSRDCPK--ESTGGEK---ICYKCQQPGHVQSQC 198
>gi|402077536|gb|EJT72885.1| zinc finger protein GIS2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 259
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 68/195 (34%), Gaps = 42/195 (21%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C + + C+ C H C + + C+ +G H+ +D
Sbjct: 40 ACYKCGNVGHYAEVCSSAE--RLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 97
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD------------------------D 514
CP + C CG GH +C A+
Sbjct: 98 CPTLRLSGAGAGGRCYNCGQPGHLARACPNPAGANMGRGAPVPRGGFTGGFPQRGGFAGG 157
Query: 515 LKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL--- 571
+ CY C H + + + CY CG+ GH+ + C A NG N
Sbjct: 158 PRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAGK 209
Query: 572 ICYKCGKEGHFARRC 586
CY+CG+ GH +R C
Sbjct: 210 TCYQCGEAGHISRDC 224
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 53/143 (37%), Gaps = 42/143 (29%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEG-------------EYHADDLKKI----QCYICKSFGH 528
++LS C +CG+ GH C E + L + QCY C+ GH
Sbjct: 34 SSLSRRACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGH 93
Query: 529 LC--CVNSSIIGLKQVS-CYNCGQSGHLGPECANSCEALNGKKSNL-------------- 571
+ C + G CYNCGQ GHL C N A G+ + +
Sbjct: 94 VQADCPTLRLSGAGAGGRCYNCGQPGHLARACPNPAGANMGRGAPVPRGGFTGGFPQRGG 153
Query: 572 --------ICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 154 FAGGPRPATCYKCGGPNHFARDC 176
>gi|322695117|gb|EFY86931.1| hypothetical protein MAC_07048 [Metarhizium acridum CQMa 102]
Length = 156
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 73/175 (41%), Gaps = 46/175 (26%)
Query: 427 NCGKENHTAATC-KMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP--GTD 483
NCG E H + C + K+NK C+ CG H++ +CP G
Sbjct: 11 NCGGEGHMSRDCSEPMKENKSCYKCGQ-------------------PGHISRECPLGGAG 51
Query: 484 QGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ----------CYICKSFGHLC--C 531
+ S C +CG+ GH +C + CY C +GH+ C
Sbjct: 52 GASGAQSTECYKCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGHMSREC 111
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
VN G+K CYNCG+SGH +C E+ G+K ICYKC + GH C
Sbjct: 112 VN----GMK---CYNCGESGHYSRDCPK--ESSGGEK---ICYKCQQAGHVQSAC 154
>gi|125811606|ref|XP_001361942.1| GA17695 [Drosophila pseudoobscura pseudoobscura]
gi|54637118|gb|EAL26521.1| GA17695 [Drosophila pseudoobscura pseudoobscura]
Length = 159
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 447 CFLCGSFKHRWKNC-KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ C F H + C ++ + C+ G H++ DC Q +N + C RC +GH + +
Sbjct: 51 CYKCNQFGHFARACPEEAERCYRCNGIGHISKDC---TQADNPT---CYRCNKTGHWVRN 104
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
C + + CY C GH+ S +CY CG+SGHL EC
Sbjct: 105 CPEAVNERGPANVSCYKCNRTGHI----SKNCPETSKTCYGCGKSGHLRREC 152
>gi|299930027|gb|ADJ58221.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH+ + G K++ C+NCG+ GHL A +C A K C+KCG+EGH + C
Sbjct: 373 GHIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGQEGHQMKDC 424
Query: 587 G---SNFKDRLRISD 598
+NF +L S+
Sbjct: 425 TERQANFLGKLWPSN 439
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGQEGHQMKDCTERQANFLGK 434
>gi|16610191|emb|CAD10638.1| PBF68 protein [Nicotiana tabacum]
Length = 594
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 15/63 (23%)
Query: 539 LKQVSCYNCGQSGHLGPECA----NSCEALNGKKSNLI-----------CYKCGKEGHFA 583
L + CYNCG+ GH+ C CE NG++S I CY CGKEGH +
Sbjct: 490 LSKKQCYNCGKEGHISKYCTERNYQGCEKSNGRESETIPVVTEAKINGQCYNCGKEGHIS 549
Query: 584 RRC 586
+ C
Sbjct: 550 KYC 552
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 34/105 (32%)
Query: 514 DLKKIQCYICKSFGHLC--CVNSSIIGLKQVS------------------CYNCGQSGHL 553
DL K QCY C GH+ C + G ++ + CYNCG+ GH+
Sbjct: 489 DLSKKQCYNCGKEGHISKYCTERNYQGCEKSNGRESETIPVVTEAKINGQCYNCGKEGHI 548
Query: 554 GPECA----NSCEALNGKKSNLI----------CYKCGKEGHFAR 584
C E NGK+S I CY CGKEGH +
Sbjct: 549 SKYCTERNYQVLENSNGKESETIPVTEAKINGQCYICGKEGHLKK 593
>gi|3386540|gb|AAC28387.1| germline RNA helicase-4 [Caenorhabditis elegans]
Length = 1156
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 66/184 (35%), Gaps = 57/184 (30%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C NCG+E H + C K P F C +NC+Q H ASDC DQ
Sbjct: 572 CHNCGEEGHISKEC--DKPKVPRFPC-------RNCEQ---------LGHFASDC---DQ 610
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSC 544
+ C CG GH C D K+ + C
Sbjct: 611 -PRVPRGPCRNCGIEGHFAVDC-------DQPKV---------------------PRGPC 641
Query: 545 YNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR----LRISDLL 600
NCGQ GH +C N + + C +C +EGH+ C + KD L D +
Sbjct: 642 RNCGQEGHFAKDCQNERVRM---EPTEPCRRCAEEGHWGYECPTRPKDLQGNFLESYDFV 698
Query: 601 FTAE 604
FT +
Sbjct: 699 FTPD 702
>gi|258569739|ref|XP_002543673.1| zinc finger CCHC domain-containing protein 13 [Uncinocarpus reesii
1704]
gi|237903943|gb|EEP78344.1| zinc finger CCHC domain-containing protein 13 [Uncinocarpus reesii
1704]
Length = 170
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 71/178 (39%), Gaps = 33/178 (18%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG---QDCFINKGSEHLASDCPG 481
C NCG H A C +K + C+ CG ++C + + C+ + H++ DCP
Sbjct: 8 CFNCGDSAHQARDCP-KKGSLVCYNCGG-----RDCSEPAKEKSCYRCGLTGHISRDCPQ 61
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL-------------KKIQCYICKSFGH 528
+ S C +CG GH +C ++ + CY C +GH
Sbjct: 62 GGESGETRSQECYKCGQVGHIARNCSQNTGYNNSGYGAGSYGGGYGSRPQTCYSCGGYGH 121
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ G K CYNCG+ GH+ EC K +CYKC + GH C
Sbjct: 122 M--ARDCTQGQK---CYNCGEVGHVSRECTTE------GKGERVCYKCKQPGHVQAAC 168
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 34/163 (20%)
Query: 440 MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDS 499
M + CF CG H+ ++C + KGS + +C G D C RCG +
Sbjct: 1 MDSYQRGCFNCGDSAHQARDCPK-------KGSL-VCYNCGGRDCSEPAKEKSCYRCGLT 52
Query: 500 GHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSI-------------IGLKQVS 543
GH C + + + +CY C GH+ C N+ G + +
Sbjct: 53 GHISRDCPQGGESGETRSQECYKCGQVGHIARNCSQNTGYNNSGYGAGSYGGGYGSRPQT 112
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY+CG GH+ +C G+K CY CG+ GH +R C
Sbjct: 113 CYSCGGYGHMARDC------TQGQK----CYNCGEVGHVSREC 145
>gi|46137255|ref|XP_390319.1| hypothetical protein FG10143.1 [Gibberella zeae PH-1]
Length = 434
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 69/189 (36%), Gaps = 58/189 (30%)
Query: 425 CSNCGKENHTAATC---KMQKQNKP---CFLCGSFKHRWKNCKQGQDCFINKGSEHLASD 478
CSNC + H + C KM++ + P C+ CG+ HR ++C +
Sbjct: 244 CSNCRELGHISKFCTQEKMERTDGPKISCYNCGADGHRVRDCPE---------------- 287
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC-------- 530
P D+ N C CG SGH + CE + ++C C GH
Sbjct: 288 -PRVDK------NACKNCGKSGHKVVDCE---EPPNPANVECRKCSEVGHFAKDCPQGGG 337
Query: 531 --CVNSSIIG-----------LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
C N G + V+C NC Q GH EC L S + C C
Sbjct: 338 RACRNCGQEGHMAKECDQPRDMSTVTCRNCEQQGHYSKEC-----PLPRDWSKVQCSNCQ 392
Query: 578 KEGHFARRC 586
+ GH RC
Sbjct: 393 EYGHTKVRC 401
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 424 TCSNCGKENHTAATCK--MQKQNKPCFLCGSFKHRWKNCKQGQD-CFINKGSE-HLASDC 479
C NCGK H C+ N C C H K+C QG N G E H+A +C
Sbjct: 294 ACKNCGKSGHKVVDCEEPPNPANVECRKCSEVGHFAKDCPQGGGRACRNCGQEGHMAKEC 353
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
DQ ++S+ C C GH C D K+QC C+ +GH
Sbjct: 354 ---DQPRDMSTVTCRNCEQQGHYSKECP---LPRDWSKVQCSNCQEYGH 396
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 15/140 (10%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-PCFLCGSFKHRWKNCKQGQ-----DCFINKGSEHLAS 477
+C NCG + H C + +K C CG H+ +C++ +C H A
Sbjct: 271 SCYNCGADGHRVRDCPEPRVDKNACKNCGKSGHKVVDCEEPPNPANVECRKCSEVGHFAK 330
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DCP QG + C CG GH C+ D+ + C C+ GH
Sbjct: 331 DCP---QGGGRA---CRNCGQEGHMAKECD---QPRDMSTVTCRNCEQQGHYSKECPLPR 381
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V C NC + GH C
Sbjct: 382 DWSKVQCSNCQEYGHTKVRC 401
>gi|449707704|gb|EMD47315.1| cellular nucleic acid binding protein, putative [Entamoeba
histolytica KU27]
Length = 396
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
KG H + P T N C +CG GH C DD K+ C+ C GH+
Sbjct: 285 KGYRHGDTSTPETASLNKSIQKVCFKCGKPGHIGRDCS---QPDD--KV-CFHCGKLGHI 338
Query: 530 ---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSN 570
C QV+CY CGQ GH +C + E +KSN
Sbjct: 339 GKNCPEQEVPESSDQVTCYKCGQVGHKSVDCPENTEGGFKRKSN 382
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 12/55 (21%)
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+N SI Q C+ CG+ GH+G +C+ + +C+ CGK GH + C
Sbjct: 300 LNKSI----QKVCFKCGKPGHIGRDCSQP--------DDKVCFHCGKLGHIGKNC 342
>gi|388854770|emb|CCF51663.1| uncharacterized protein [Ustilago hordei]
Length = 460
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 441 QKQNK-PCFLCGSFKHRWKNCKQGQDC--FINKGSEHLASDCP--GTDQGNNLSSNFCLR 495
Q+Q+K CF C H K+C D K S+ + D P G D + C R
Sbjct: 262 QRQSKLKCFACRGMGHSAKDCPNALDAQSISLKKSDDTSGDRPMIGRD-----AVGICFR 316
Query: 496 CGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQV--SCYNCGQS 550
CG + H LS C + D+L C+IC S GHL C +++ G+ SC C
Sbjct: 317 CGSTEHTLSKCRKAAMKNDELPYATCFICHSKGHLSSKCPHNAGRGVYPEGGSCKLCSSV 376
Query: 551 GHLGPEC 557
HL +C
Sbjct: 377 EHLAKDC 383
>gi|156082886|ref|XP_001608927.1| zinc knuckle domain containing protein [Babesia bovis T2Bo]
gi|154796177|gb|EDO05359.1| zinc knuckle domain containing protein [Babesia bovis]
Length = 200
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-------CFINKGSEHL 475
+TC C K HT C + CF CGS H ++C+ + CFI K + H+
Sbjct: 102 KTCFKCRKRGHTLRECSAAEVGI-CFRCGSTDHILRDCQDPDNGTLPFTSCFICKKNGHI 160
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
AS CP D+G + C CG H + C
Sbjct: 161 ASQCPDNDKGIYPNGGCCFFCGSVTHLKAMC 191
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 10/97 (10%)
Query: 464 QDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYIC 523
+ CF + H +C + G C RCG + H L C+ + L C+IC
Sbjct: 102 KTCFKCRKRGHTLRECSAAEVG------ICFRCGSTDHILRDCQDPDNG-TLPFTSCFIC 154
Query: 524 KSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
K GH+ C N I C+ CG HL C
Sbjct: 155 KKNGHIASQCPDNDKGIYPNGGCCFFCGSVTHLKAMC 191
>gi|71990816|ref|NP_491207.3| Protein GLH-4 [Caenorhabditis elegans]
gi|51338745|sp|O76743.2|GLH4_CAEEL RecName: Full=ATP-dependent RNA helicase glh-4; AltName:
Full=Germline helicase 4
gi|373219730|emb|CCD69784.1| Protein GLH-4 [Caenorhabditis elegans]
Length = 1156
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 66/184 (35%), Gaps = 57/184 (30%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C NCG+E H + C K P F C +NC+Q H ASDC DQ
Sbjct: 572 CHNCGEEGHISKEC--DKPKVPRFPC-------RNCEQ---------LGHFASDC---DQ 610
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSC 544
+ C CG GH C D K+ + C
Sbjct: 611 -PRVPRGPCRNCGIEGHFAVDC-------DQPKV---------------------PRGPC 641
Query: 545 YNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR----LRISDLL 600
NCGQ GH +C N + + C +C +EGH+ C + KD L D +
Sbjct: 642 RNCGQEGHFAKDCQNERVRMEPTEP---CRRCAEEGHWGYECPTRPKDLQGNFLESYDFV 698
Query: 601 FTAE 604
FT +
Sbjct: 699 FTPD 702
>gi|320590859|gb|EFX03302.1| zinc knuckle domain containing protein [Grosmannia clavigera
kw1407]
Length = 190
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 81/201 (40%), Gaps = 44/201 (21%)
Query: 420 WNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG----QDCFINKGSEHL 475
+ C +CG H A C + K C+ CG H ++C +G + C+ + H+
Sbjct: 3 FQGRACFSCGATTHQARDCPNRGAAK-CYNCGGEGHMSRDCPEGPKETKTCYRCGQAGHI 61
Query: 476 ASDCPGTDQGNNLSSNF--CLRCGDSGHDLSSCE-----------------------GEY 510
+ DCP + + C +CG+ GH +C G
Sbjct: 62 SRDCPQSAGPGGSGPSGAECYKCGEVGHIARNCPKGGFGGNPSGGAGGYGNSYGGGGGGG 121
Query: 511 HADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKK 568
+ CY C GH+ CVN S CYNCG++GH +C + + +G+K
Sbjct: 122 GYGGNQNKTCYSCGGVGHMSRDCVNGS-------KCYNCGETGHFSRDCPKA--STSGEK 172
Query: 569 SNLICYKCGKEGHFARRCGSN 589
ICYKC + GH C +N
Sbjct: 173 ---ICYKCQQPGHIQADCPNN 190
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 70/177 (39%), Gaps = 44/177 (24%)
Query: 440 MQKQNKPCFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCG 497
M+ Q + CF CG+ H+ ++C + C+ G H++ DCP + + C RCG
Sbjct: 1 MEFQGRACFSCGATTHQARDCPNRGAAKCYNCGGEGHMSRDCPEGPK----ETKTCYRCG 56
Query: 498 DSGHDLSSCE--GEYHADDLKKIQCYICKSFGHLC--C---------------------- 531
+GH C +CY C GH+ C
Sbjct: 57 QAGHISRDCPQSAGPGGSGPSGAECYKCGEVGHIARNCPKGGFGGNPSGGAGGYGNSYGG 116
Query: 532 --VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + +CY+CG GH+ +C +NG K CY CG+ GHF+R C
Sbjct: 117 GGGGGGYGGNQNKTCYSCGGVGHMSRDC------VNGSK----CYNCGETGHFSRDC 163
>gi|299929693|gb|ADJ58054.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH+ + G K++ C+NCG+ GHL A +C A K C+KCG+EGH + C
Sbjct: 373 GHIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGQEGHQMKDC 424
Query: 587 G---SNFKDRLRISD 598
+NF +L S+
Sbjct: 425 TERQANFLGKLWPSN 439
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGQEGHQMKDCTERQANFLGK 434
>gi|164418880|gb|ABY54742.1| gag protein [Human immunodeficiency virus 1]
Length = 483
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRI 596
+ V C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 374 RTVKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWP 425
Query: 597 SDLL----FTAERPPTRARHFVGSNGTP 620
S F RP A HF+ S P
Sbjct: 426 SQKGRPGNFLQSRPEPTAPHFLQSRPEP 453
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 378 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 422
>gi|149408507|ref|XP_001509827.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Ornithorhynchus anatinus]
Length = 270
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 24/129 (18%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K CF + H +DCP + ++ + C RCG + H+++ C +
Sbjct: 124 KNAMVCFHCRKPGHGLADCPAVLESQDMGTGICYRCGSTEHEINKCRAK----------- 172
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
++ ++ C+ CG+ GHL C ++ + L + C CG
Sbjct: 173 -----------IDPALGEFSFAKCFICGEMGHLSRSCPDNPKGLYAEGG--CCRLCGSVE 219
Query: 581 HFARRCGSN 589
HF + C N
Sbjct: 220 HFKKDCPEN 228
>gi|254667125|gb|ACT76506.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKXCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|259126237|gb|ACV94123.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKKIKCFNCGKDGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRI 435
Query: 595 RISD 598
SD
Sbjct: 436 WPSD 439
>gi|52345636|ref|NP_001004865.1| zinc finger protein 9 [Xenopus (Silurana) tropicalis]
gi|49257796|gb|AAH74704.1| CCHC-type zinc finger, nucleic acid binding protein [Xenopus
(Silurana) tropicalis]
Length = 138
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 491 NFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQS 550
+ C RCG+SGH C DL++ CY C GH+ ++ CYNCG+
Sbjct: 52 DICYRCGESGHLAKDC-------DLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKP 104
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GHL A C+ + +K CY CG+ GH AR C
Sbjct: 105 GHL----ARDCDHADEQK----CYSCGEFGHLAREC 132
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 32/121 (26%)
Query: 488 LSSNFCLRCGDSGHDLSSC----------------------EGEYHADDLKKIQCYICKS 525
+SSN C +CG +GH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDI-CYRCGE 59
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
GHL + L++ +CYNCG+ GH+ +C K+ CY CGK GH AR
Sbjct: 60 SGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGHLARD 110
Query: 586 C 586
C
Sbjct: 111 C 111
>gi|47228551|emb|CAG05371.1| unnamed protein product [Tetraodon nigroviridis]
Length = 274
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 24/121 (19%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF + H +DCP D+ + C RCG + H++ C +
Sbjct: 135 CFNCRKPGHGLADCPEADRDEEMGRGICYRCGSTEHEIQKCRAK---------------- 178
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
V+ ++ C+ CG++GHL C ++ + L + C CG HF +
Sbjct: 179 ------VDPALGEFPYAKCFICGETGHLSRTCPDNPKGLYAQGG--CCRVCGSVEHFQKD 230
Query: 586 C 586
C
Sbjct: 231 C 231
>gi|308152398|emb|CBX25651.1| gag-pol polyprotein, intergenic region [Small ruminant lentivirus]
Length = 214
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 10/49 (20%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G K+ +CYNCG+ GHL +C +S CYKCGK GH R C
Sbjct: 171 GAKEQTCYNCGKPGHLARQC----------RSGKTCYKCGKRGHVQRDC 209
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 374 QKKRRKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENH 433
QK KK + ++K++ R+ + Y +++L + R G +TC NCGK H
Sbjct: 128 QKVLGKKAQASTVEEKLQACREVESSTYK--MQLLAQALRPTGERGAKEQTCYNCGKPGH 185
Query: 434 TAATCKMQKQNKPCFLCGSFKHRWKNCKQG 463
A C + K C+ CG H ++C+QG
Sbjct: 186 LARQC---RSGKTCYKCGKRGHVQRDCRQG 212
>gi|241022874|ref|XP_002406044.1| cellular nucleic acid binding protein, putative [Ixodes scapularis]
gi|215491870|gb|EEC01511.1| cellular nucleic acid binding protein, putative [Ixodes scapularis]
Length = 239
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 475 LASDCPGTDQGNNLSSNF-CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--C 531
++ +CP D G S C +CG+ GH C D K C+ C GH+ C
Sbjct: 1 MSRECPSADSGGGRSGGRACFKCGEEGHMSRDCPSAGGDGDRPKRGCFNCGEDGHMSRDC 60
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK 591
N + C+ CG+ GH+ +C + E + + C+KC +EGH A+ C +
Sbjct: 61 PNPKQ--ERSKGCFKCGEEGHMSRDCPTAGEGGDSDRPK-GCFKCQQEGHMAKDCTNEAV 117
Query: 592 DRL 594
R+
Sbjct: 118 PRM 120
>gi|164418894|gb|ABY54749.1| gag protein [Human immunodeficiency virus 1]
Length = 483
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRI 596
+ V C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 374 RTVKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWP 425
Query: 597 SDLL----FTAERPPTRARHFVGSNGTP 620
S F RP A HF+ S P
Sbjct: 426 SQKGRPGNFLQSRPEPTAPHFLQSRPEP 453
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 378 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 422
>gi|164418886|gb|ABY54745.1| gag protein [Human immunodeficiency virus 1]
Length = 483
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRI 596
+ V C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 374 RTVKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWP 425
Query: 597 SDLL----FTAERPPTRARHFVGSNGTP 620
S F RP A HF+ S P
Sbjct: 426 SQKGRPGNFLQSRPEPTAPHFLQSRPEP 453
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 378 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 422
>gi|57868008|gb|AAW57370.1| gag protein [Human immunodeficiency virus 1]
Length = 211
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH+ S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 106 GHILMQRSNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 157
Query: 587 G---SNFKDRLRIS 597
+NF ++ S
Sbjct: 158 TERQANFLGKIWPS 171
>gi|410079168|ref|XP_003957165.1| hypothetical protein KAFR_0D03820 [Kazachstania africana CBS 2517]
gi|372463750|emb|CCF58030.1| hypothetical protein KAFR_0D03820 [Kazachstania africana CBS 2517]
Length = 159
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 30/159 (18%)
Query: 445 KPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLS 504
K C++CG H ++C + C+ H+ S+C + +S+ C CG++GH S
Sbjct: 5 KACYICGKLGHLAEDCDSEKLCYNCNKPGHVQSEC---TEPRTVSNKQCYNCGETGHIQS 61
Query: 505 SCEGEYHADDLKKIQCYICKSFGHL---C------CVNSSIIGLKQVSCYNCGQSGHLGP 555
C + +CY C GH+ C N++ ++SCY CG H+
Sbjct: 62 ECTVQ---------RCYNCNEVGHISRDCDQPKRFNNNNNKRFNSRLSCYKCGGPNHMAK 112
Query: 556 ECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRL 594
+C + + + CY CG+ GH A+ C ++ +++
Sbjct: 113 DC---------RSAEVKCYTCGRFGHVAKDCSADPNEKV 142
>gi|14530237|gb|AAK65970.1|AF286237_1 gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 21/106 (19%)
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII-------GLKQVSCYNCGQSGHLGP 555
+++C+G ++ + ++ H+ N++I+ G K++ C+NCG+ GHL
Sbjct: 343 MTACQGVGGPSHKARV---LAEAMSHVQSTNTNIMMQRGNFRGQKRIKCFNCGKEGHL-- 397
Query: 556 ECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRISD 598
A +C A K C+KCGKEGH + C +NF ++ S+
Sbjct: 398 --ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWPSN 437
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 388 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 432
>gi|403264382|ref|XP_003924463.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Saimiri boliviensis boliviensis]
Length = 272
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C+ + +
Sbjct: 126 KNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFA 185
Query: 519 QCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GH C N + C CG HL +C S
Sbjct: 186 KCFVCGEMGHPSRACPDNPKGLYADGGGCKLCGSVEHLKKDCPES 230
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C K H A C +N+ C+ CGS +H CK D
Sbjct: 127 NAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAK 186
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ H + CP +G C CG H C ++D + ++
Sbjct: 187 CFVCGEMGHPSRACPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSDRMVRV 239
>gi|328863685|gb|EGG12784.1| hypothetical protein MELLADRAFT_101315 [Melampsora larici-populina
98AG31]
Length = 385
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 21/137 (15%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSF-KHRWKNCKQGQDCFINKGSEHLASDCPGT 482
TC+ C + +H+A C+ + C CG+ +H + C CF HL+ CP +
Sbjct: 81 TCTICQEPDHSAKNCEHEL----CLTCGAIDEHITRLCPVSLVCFACGSRGHLSRHCPSS 136
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
+ L + C++CG + H +C + + KI KS
Sbjct: 137 SETRILGKD-CIKCGSTNHLSLNCPSIWRCYEEIKIPNRKPKSL--------------VP 181
Query: 543 SCYNCGQSG-HLGPECA 558
SCYNCG +G H G EC
Sbjct: 182 SCYNCGDNGDHFGDECP 198
>gi|357510711|ref|XP_003625644.1| Serine carboxypeptidase [Medicago truncatula]
gi|355500659|gb|AES81862.1| Serine carboxypeptidase [Medicago truncatula]
Length = 712
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 16/107 (14%)
Query: 517 KIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
+I CY C GH S++ G C+ CGQ GH EC K+ +++CY C
Sbjct: 337 EIVCYKCGEKGH----KSNVCGRDDRKCFRCGQKGHSLAEC---------KRGDIVCYNC 383
Query: 577 GKEGHFARRCGSNFKDRLRISDLLFTAERPPTRARHFVGS---NGTP 620
EGH + +C K R+ T + P R G+ N TP
Sbjct: 384 NGEGHISSQCPEPKKTRIGGKVFALTGTQTPNEDRLIRGTCFFNSTP 430
>gi|255947154|ref|XP_002564344.1| Pc22g03000 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591361|emb|CAP97588.1| Pc22g03000 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 487
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 14/135 (10%)
Query: 425 CSNCGKENHTAATCKMQKQNKP-CFLCGSFKHRWKNCKQGQ-----DCFINKGSEHLASD 478
CSNC H C+ Q++NK C CGS +H C + + +C + H A D
Sbjct: 309 CSNCDGVGHRVRDCRQQRRNKHGCRNCGSVEHIASECTEPRSAADVECRKCNETGHFAKD 368
Query: 479 CPGT-DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
CP D+G C CG H C+ D+ + C C+ GH
Sbjct: 369 CPNVADRG----PRTCRNCGSEDHIARDCD---QPRDVSTVTCRNCEKTGHYSRDCDQPK 421
Query: 538 GLKQVSCYNCGQSGH 552
+V C NCG+ GH
Sbjct: 422 DWSKVQCKNCGEMGH 436
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 21/172 (12%)
Query: 425 CSNCGKENHTAATCKMQKQNK------PCFLCGSFKHRWKNCKQG----QDCFINKGSEH 474
C NCG+ H + +CK ++ + C C HR ++C+Q C EH
Sbjct: 281 CLNCGELGHISRSCKEERADGNDRTEIKCSNCDGVGHRVRDCRQQRRNKHGCRNCGSVEH 340
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNS 534
+AS+C ++ C +C ++GH C + D C C S H+
Sbjct: 341 IASECTEPRSAADVE---CRKCNETGHFAKDCP---NVADRGPRTCRNCGSEDHIARDCD 394
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ V+C NC ++GH +C S + C CG+ GH RC
Sbjct: 395 QPRDVSTVTCRNCEKTGHYSRDCDQP-----KDWSKVQCKNCGEMGHTVVRC 441
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQ----DCFINKGSEHLASDC 479
C NCG+E H+ A C ++ CF CG H C + + C I + H A DC
Sbjct: 66 ACYNCGQEGHSKAECPEPRKTGSCFNCGQEGHSKSECTKPRVFKGTCRICEKEGHPAVDC 125
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSC 506
P + C C GH C
Sbjct: 126 P------ERPPDVCKNCQTEGHKTMEC 146
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 14/72 (19%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN--FKDRLRISD-- 598
+CYNCGQ GH EC + C+ CG+EGH C FK RI +
Sbjct: 66 ACYNCGQEGHSKAECPEP-------RKTGSCFNCGQEGHSKSECTKPRVFKGTCRICEKE 118
Query: 599 ---LLFTAERPP 607
+ ERPP
Sbjct: 119 GHPAVDCPERPP 130
>gi|145518073|ref|XP_001444914.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412347|emb|CAK77517.1| unnamed protein product [Paramecium tetraurelia]
Length = 243
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 424 TCSNCGKENHTAATCKMQKQNKP---CFLCGSFKHRWKNCKQGQD-------CFINKGSE 473
C C K HTA C+ Q C+ CGS KH K+C++ + CF+ K +
Sbjct: 128 VCLVCKKVGHTAQHCRENVQPTTDVICYNCGSQKHTLKDCQKPKSGSLKFATCFVCKEAG 187
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
H++ DCP +G C C + H ++C
Sbjct: 188 HISRDCPKNPKGLYAYGGGCYICSSTHHTQANC 220
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 6/105 (5%)
Query: 492 FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQ 549
CL C GH C + + CY C S H C LK +C+ C +
Sbjct: 128 VCLVCKKVGHTAQHCRE--NVQPTTDVICYNCGSQKHTLKDCQKPKSGSLKFATCFVCKE 185
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRL 594
+GH+ +C + + L CY C H C N K+R+
Sbjct: 186 AGHISRDCPKNPKGLYAYGGG--CYICSSTHHTQANCPQNPKNRI 228
>gi|357114909|ref|XP_003559236.1| PREDICTED: DNA-binding protein HEXBP-like [Brachypodium distachyon]
Length = 301
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 69/183 (37%), Gaps = 28/183 (15%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
R+ +F ++ TC+NC H AA C + C+ C H C C
Sbjct: 110 CRRSGHFARDCPSASTCNNCNLPGHFAAECTSKTV---CWNCKKSGHIATECTNEALCHT 166
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
S HLA DCP + S+ C C GH C + C C+ GH
Sbjct: 167 CSKSGHLARDCPTSG-----SAKLCNNCFQPGHIAVDCTNDR--------ACNNCRQSGH 213
Query: 529 LC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSC---EALNGKKSNLICYKCGKEGHFA 583
+ C N + L C SGHL C + E G +++C CG+ GH +
Sbjct: 214 IARECTNDPVCNL-------CNVSGHLARACPKTTLASEIHGGPFRDILCRMCGQPGHIS 266
Query: 584 RRC 586
R C
Sbjct: 267 RNC 269
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 53/155 (34%), Gaps = 44/155 (28%)
Query: 472 SEHLASDCPGTDQGNNL-----------SSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
S H A DCP NN S C C SGH + C E C
Sbjct: 113 SGHFARDCPSASTCNNCNLPGHFAAECTSKTVCWNCKKSGHIATECTNE--------ALC 164
Query: 521 YICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI------ 572
+ C GHL C S L C NC Q GH+ +C N N ++S I
Sbjct: 165 HTCSKSGHLARDCPTSGSAKL----CNNCFQPGHIAVDCTNDRACNNCRQSGHIARECTN 220
Query: 573 ---CYKCGKEGHFARRC----------GSNFKDRL 594
C C GH AR C G F+D L
Sbjct: 221 DPVCNLCNVSGHLARACPKTTLASEIHGGPFRDIL 255
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 54/145 (37%), Gaps = 18/145 (12%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
N C C K H A C K C C H +C + C + S H+A +C
Sbjct: 160 NEALCHTCSKSGHLARDCPTSGSAKLCNNCFQPGHIAVDCTNDRACNNCRQSGHIAREC- 218
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCE-----GEYHADDLKKIQCYICKSFGHLCCVNSS 535
D NL C SGH +C E H + I C +C GH+ S
Sbjct: 219 TNDPVCNL-------CNVSGHLARACPKTTLASEIHGGPFRDILCRMCGQPGHI-----S 266
Query: 536 IIGLKQVSCYNCGQSGHLGPECANS 560
+ V C CG GH+ EC ++
Sbjct: 267 RNCMATVICDTCGGRGHMSYECPSA 291
>gi|409684443|gb|AFV34347.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRI 596
K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 386 KRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHLMKDCTERQANFLGRLWP 437
Query: 597 SD 598
S+
Sbjct: 438 SN 439
>gi|295658168|ref|XP_002789646.1| DNA-binding protein HEXBP [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283131|gb|EEH38697.1| DNA-binding protein HEXBP [Paracoccidioides sp. 'lutzii' Pb01]
Length = 190
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 72/185 (38%), Gaps = 32/185 (17%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG + H + C + K C+ CG H ++C + GS
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQGGHISRDC-------TSAGSGDS 74
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL--------------KKIQCY 521
+ G G SS C +CG GH +C Y + ++ CY
Sbjct: 75 YTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYSSGGYGSGAGGYGGGYGGNRQQTCY 134
Query: 522 ICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
C FGH+ G K CYNCG+ GH+ +C K +CYKC + GH
Sbjct: 135 SCGGFGHM--ARDCTQGQK---CYNCGEVGHVSRDCPTE------VKGERVCYKCKQPGH 183
Query: 582 FARRC 586
C
Sbjct: 184 VQAAC 188
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CGD+ H C CY C GH+ K+ +CY CGQ GH
Sbjct: 10 CFNCGDASHQARDCP------KKGTPTCYNCGGQGHV--SRECTAAPKEKTCYRCGQGGH 61
Query: 553 LGPEC--ANSCEALNGKKSNLI--------CYKCGKEGHFARRC 586
+ +C A S ++ CYKCG+ GH AR C
Sbjct: 62 ISRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNC 105
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 66/183 (36%), Gaps = 46/183 (25%)
Query: 440 MQKQNKPCFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCG 497
Q + CF CG H+ ++C K C+ G H++ +C + C RCG
Sbjct: 3 YQSGGRGCFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPK-----EKTCYRCG 57
Query: 498 DSGHDLSSCEGEYHADDLKKI------------QCYICKSFGHLC--CVNSSIIGL---- 539
GH C D +CY C GH+ C G
Sbjct: 58 QGGHISRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYSSGGYGSG 117
Query: 540 -----------KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+Q +CY+CG GH+ +C G+K CY CG+ GH +R C +
Sbjct: 118 AGGYGGGYGGNRQQTCYSCGGFGHMARDC------TQGQK----CYNCGEVGHVSRDCPT 167
Query: 589 NFK 591
K
Sbjct: 168 EVK 170
>gi|225684876|gb|EEH23160.1| cellular nucleic acid-binding protein [Paracoccidioides
brasiliensis Pb03]
gi|226287748|gb|EEH43261.1| DNA-binding protein HEXBP [Paracoccidioides brasiliensis Pb18]
Length = 190
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 72/185 (38%), Gaps = 32/185 (17%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NCG + H + C + K C+ CG H ++C + GS
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQGGHISRDC-------TSAGSGDS 74
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL--------------KKIQCY 521
+ G G SS C +CG GH +C Y + ++ CY
Sbjct: 75 YTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYGSGGYGGGAGGYGGGYGGNRQQTCY 134
Query: 522 ICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
C FGH+ G K CYNCG+ GH+ +C K +CYKC + GH
Sbjct: 135 SCGGFGHM--ARDCTQGQK---CYNCGEVGHVSRDCPTE------VKGERVCYKCKQPGH 183
Query: 582 FARRC 586
C
Sbjct: 184 VQAAC 188
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CGD+ H C CY C GH+ K+ +CY CGQ GH
Sbjct: 10 CFNCGDASHQARDCP------KKGTPTCYNCGGQGHV--SRECTAAPKEKTCYRCGQGGH 61
Query: 553 LGPEC--ANSCEALNGKKSNLI--------CYKCGKEGHFARRC 586
+ +C A S ++ CYKCG+ GH AR C
Sbjct: 62 ISRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNC 105
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 66/183 (36%), Gaps = 46/183 (25%)
Query: 440 MQKQNKPCFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCG 497
Q + CF CG H+ ++C K C+ G H++ +C + C RCG
Sbjct: 3 YQSGGRGCFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPK-----EKTCYRCG 57
Query: 498 DSGHDLSSCEGEYHADDLKKI------------QCYICKSFGHLC--CVNSSIIGL---- 539
GH C D +CY C GH+ C G
Sbjct: 58 QGGHISRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYGSGGYGGG 117
Query: 540 -----------KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+Q +CY+CG GH+ +C G+K CY CG+ GH +R C +
Sbjct: 118 AGGYGGGYGGNRQQTCYSCGGFGHMARDC------TQGQK----CYNCGEVGHVSRDCPT 167
Query: 589 NFK 591
K
Sbjct: 168 EVK 170
>gi|164418890|gb|ABY54747.1| gag protein [Human immunodeficiency virus 1]
Length = 483
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRI 596
+ V C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 374 RTVKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWP 425
Query: 597 SDLL----FTAERPPTRARHFVGSNGTP 620
S F RP A HF+ S P
Sbjct: 426 SQKGRPGNFLQSRPEPTAPHFLQSRPEP 453
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 378 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 422
>gi|68464905|ref|XP_723530.1| hypothetical protein CaO19.4844 [Candida albicans SC5314]
gi|68465282|ref|XP_723340.1| hypothetical protein CaO19.12307 [Candida albicans SC5314]
gi|46445367|gb|EAL04636.1| hypothetical protein CaO19.12307 [Candida albicans SC5314]
gi|46445564|gb|EAL04832.1| hypothetical protein CaO19.4844 [Candida albicans SC5314]
Length = 381
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 86/226 (38%), Gaps = 71/226 (31%)
Query: 369 VGERQQKKRRKKTRVIEAKDKVEDARKENEA----KYNVV------LRMLLRKPRYF--- 415
GE+ ++++ K+ +E+K++ KE+ Y+ V L L + RYF
Sbjct: 12 TGEKFKRQKYKEQSFVESKERGSRDTKEHTPTTALSYDEVNDDLDELVALRGEGRYFGVT 71
Query: 416 ---DPPGWNSET----CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
D G + ++ C+NC K HT A C + C CG+
Sbjct: 72 DPDDESGISRQSLGPLCANCYKRGHTRAKCTVVI----CHKCGAI--------------- 112
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
+H S CP T C RCG+ GH +S C+ + K+ C C SF H
Sbjct: 113 ---DDHYESQCPTTI--------ICSRCGEKGHIVSQCKSKIR----KRQYCRTCDSFKH 157
Query: 529 ----LCCVNSSIIG-------------LKQVSCYNCGQSGHLGPEC 557
+ S I L ++ CYNC + H G EC
Sbjct: 158 GDENCPSIWRSYITKSPSQGENEESSVLPRIYCYNCASNEHFGDEC 203
>gi|426201984|gb|EKV51907.1| hypothetical protein AGABI2DRAFT_114629 [Agaricus bisporus var.
bisporus H97]
Length = 369
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + G+K + C+ CGK GH A+ C SN R+R
Sbjct: 296 CHKCGKFGHIGKNCEEKKKNF-GEKKSFKCFSCGKFGHIAKNCRSNRSGRIR 346
>gi|426202029|gb|EKV51952.1| hypothetical protein AGABI2DRAFT_114687 [Agaricus bisporus var.
bisporus H97]
Length = 369
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + G+K + C+ CGK GH A+ C SN R+R
Sbjct: 296 CHKCGKFGHIGKNCEEKKKNF-GEKKSFKCFSCGKFGHIAKNCRSNRSGRIR 346
>gi|384496468|gb|EIE86959.1| hypothetical protein RO3G_11670 [Rhizopus delemar RA 99-880]
Length = 229
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 74/187 (39%), Gaps = 37/187 (19%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG+ H C + + C+ K H ++DC + C CG GH S
Sbjct: 8 CYKCGNVGHFANVCPEAERLCYNCKQPGHYSADC---TTPKVVEPKQCFNCGGVGHIQSQ 64
Query: 506 CEGEYHADDLKK------IQCYICKSFGHLC--CV---------NSSIIGLKQ---VSCY 545
C + QC+ C+ GHL C N+S+ ++ + C+
Sbjct: 65 CTSPRSTAPVATKPSRALPQCFNCQQHGHLAKECTQPSQPREPRNNSLRKPRRQRNIICH 124
Query: 546 NCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS-NFKDRLRISDLLFTAE 604
CG H +C K S+++CY C K GH AR C S FK + + F +
Sbjct: 125 KCGGINHFAKDC---------KASDILCYNCNKYGHIARECTSPGFKPKPKT---CFVCQ 172
Query: 605 RPPTRAR 611
+P AR
Sbjct: 173 KPGHIAR 179
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 63/177 (35%), Gaps = 38/177 (21%)
Query: 425 CSNCGKENHTAATCKMQKQNKP--CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NC + H +A C K +P CF CG H C + + +A T
Sbjct: 28 CYNCKQPGHYSADCTTPKVVEPKQCFNCGGVGHIQSQCTSP------RSTAPVA-----T 76
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEG-----EYHADDLKK------IQCYICKSFGHLC- 530
L C C GH C E + L+K I C+ C H
Sbjct: 77 KPSRALPQ--CFNCQQHGHLAKECTQPSQPREPRNNSLRKPRRQRNIICHKCGGINHFAK 134
Query: 531 -CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C S I+ CYNC + GH+ A C + K C+ C K GH AR C
Sbjct: 135 DCKASDIL------CYNCNKYGHI----ARECTSPGFKPKPKTCFVCQKPGHIARNC 181
>gi|67472483|ref|XP_652045.1| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|56468849|gb|EAL46657.1| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 391
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
KG H + P T N C +CG GH C DD K+ C+ C GH+
Sbjct: 280 KGYRHGDTSTPETASLNKSIQKVCFKCGKPGHIGRDCS---QPDD--KV-CFHCGKLGHI 333
Query: 530 ---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSN 570
C QV+CY CGQ GH +C + E +KSN
Sbjct: 334 GKNCPEQEVPESSDQVTCYKCGQVGHKSVDCPENTEGGFKRKSN 377
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 12/55 (21%)
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+N SI Q C+ CG+ GH+G +C+ + +C+ CGK GH + C
Sbjct: 295 LNKSI----QKVCFKCGKPGHIGRDCSQP--------DDKVCFHCGKLGHIGKNC 337
>gi|255728315|ref|XP_002549083.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133399|gb|EER32955.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 396
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 67/190 (35%), Gaps = 47/190 (24%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
CSNC K H A CK+ C CG+ +H S CP T
Sbjct: 89 CSNCHKRGHIRAKCKVVI----CHKCGAI------------------DDHYESQCPTTI- 125
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSC 544
C RCG+ GH +SSC+ + K+ C C +F H +C
Sbjct: 126 -------ICARCGEKGHIVSSCKSKVK----KRQYCRSCDTFKH-----------SDENC 163
Query: 545 YNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFTAE 604
+ +S + P + S + + + CY CG + H+ C K R+ F+
Sbjct: 164 PSIWRSYIIKP--SQSGDDVRDALPRIYCYNCGSDEHYGDECSEQRKSRIPNLGSAFSGN 221
Query: 605 RPPTRARHFV 614
P R
Sbjct: 222 NLPKEFRELY 231
>gi|41353552|gb|AAS01339.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
SS G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SSFRGPKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRIS 597
R+ S
Sbjct: 432 LGRIWPS 438
>gi|393245699|gb|EJD53209.1| hypothetical protein AURDEDRAFT_54325 [Auricularia delicata
TFB-10046 SS5]
Length = 177
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 60/145 (41%), Gaps = 26/145 (17%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLAS 477
P + TC NCG E H + C +++ K C+ C+ +DC N G+ +
Sbjct: 44 PKAGTPTCYNCGGEGHLSRDCTTEQKAKACY----------KCQLSRDCPDNTGARNGG- 92
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSC-----EGEYHADDLKKIQCYICKSFGHLCCV 532
G GN SS C RCG +GH +C G Y + Y C GHL
Sbjct: 93 ---GPFSGN--SSAECYRCGKAGHIARACPDAQSSGGYGNFSSSSSRTYTCGGVGHL--- 144
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPEC 557
S + CYNC SGH+ +C
Sbjct: 145 --SRDCTQGAKCYNCNGSGHISRDC 167
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Query: 419 GWNSETCSNCGKENHTAATCK----------MQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
G +S C CGK H A C + + CG H ++C QG C+
Sbjct: 97 GNSSAECYRCGKAGHIARACPDAQSSGGYGNFSSSSSRTYTCGGVGHLSRDCTQGAKCYN 156
Query: 469 NKGSEHLASDCPG 481
GS H++ DCPG
Sbjct: 157 CNGSGHISRDCPG 169
>gi|310792945|gb|EFQ28406.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 229
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 68/193 (35%), Gaps = 40/193 (20%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL--CYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD----------------------DLK 516
CP +S C CG GH +C + +
Sbjct: 66 CPTLRLSGAGTSGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRGAYGGYGRGGFTGGPR 125
Query: 517 KIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---IC 573
CY C H + + + CY CG+ GH+ + C A NG N C
Sbjct: 126 PATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAGKTC 177
Query: 574 YKCGKEGHFARRC 586
Y+CG+ GH +R C
Sbjct: 178 YQCGEAGHISRDC 190
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 17/107 (15%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS-- 543
++LS C +CG+ GH C A+ L CY CK GH S+ L + +
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSS---AERL----CYNCKQPGH----ESNGCPLPRTTEA 50
Query: 544 --CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
CY+C GH+ +C L+G ++ CY CG+ GH AR C S
Sbjct: 51 KQCYHCQGLGHVQADCPT--LRLSGAGTSGRCYNCGQPGHLARACPS 95
>gi|327277239|ref|XP_003223373.1| PREDICTED: zinc finger CCHC domain-containing protein 7-like
[Anolis carolinensis]
Length = 580
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 57/150 (38%), Gaps = 44/150 (29%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTD 483
TC NC K H + C K+ PC LC ++G HL + CP
Sbjct: 262 TCRNCDKRGHLSKNCPAPKKIPPCCLCS---------QRG----------HLQNSCP--- 299
Query: 484 QGNNLSSNFCLRCGDSGHDLSSC-EGEY-------------HADDLKKI--QCYICKSFG 527
+ FCL C GH C E EY +AD +I Q ++ G
Sbjct: 300 ------ARFCLNCCLPGHCSRECLEREYWRKHCNRCAMRGHYADACPEIWRQYHLTTKPG 353
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
L + S + CYNCG+ GH G EC
Sbjct: 354 PLKRADFSSDHSPSMYCYNCGEEGHYGYEC 383
>gi|225458095|ref|XP_002279453.1| PREDICTED: zinc finger protein GIS2-like isoform 1 [Vitis vinifera]
Length = 254
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 77/212 (36%), Gaps = 41/212 (19%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
++P +F N C+NC H A+ C Q C+ C H NC C
Sbjct: 54 CKRPGHFARECPNVAICNNCNLPGHIASECTTQSL---CWNCREPGHMASNCPNEGICHS 110
Query: 469 NKGSEHLASDCP--GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ------- 519
+ H A DCP G G+ C C GH + C + + +K
Sbjct: 111 CNKTGHRARDCPTPGLPSGD---LRLCNNCYKQGHIAADCTNDKACKNCRKTGHIARDCQ 167
Query: 520 ----CYICKSFGHLC--CVNSSIIG----------LKQVSCYNCGQSGHLGPECANSCEA 563
C +C GH+ C + I G + V C +C Q GH+ +C
Sbjct: 168 NEPVCNLCNIAGHVARQCPKAEIFGERGGGGRNTGFRDVICRSCNQVGHMSRDCM----- 222
Query: 564 LNGKKSNLICYKCGKEGHFARRCGSN-FKDRL 594
S +IC CG GH A C S F DR+
Sbjct: 223 ----VSLVICNNCGGRGHMAFECPSGRFMDRM 250
>gi|9369368|gb|AAF87117.1|AC006434_13 F10A5.22 [Arabidopsis thaliana]
Length = 265
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 75/191 (39%), Gaps = 55/191 (28%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
++P +F N C+NCG H AA C + R NC++
Sbjct: 68 CKRPGHFARDCSNVSVCNNCGLPGHIAAECTAES-------------RCWNCRE------ 108
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFG 527
H+AS+C +++G C CG SGH C + A DL+ C C G
Sbjct: 109 ---PGHVASNC--SNEG------ICHSCGKSGHRARDCSNSDSRAGDLR--LCNNCFKQG 155
Query: 528 HLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
HL C N +C NC SGH+ +C N + +C C GH AR
Sbjct: 156 HLAADCTNDK-------ACKNCRTSGHIARDCRN----------DPVCNICSISGHVARH 198
Query: 586 C---GSNFKDR 593
C SN+ DR
Sbjct: 199 CPKGDSNYSDR 209
>gi|82568575|dbj|BAE48531.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 884
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCGKEGH + C + R DL
Sbjct: 388 KTVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFFR-EDL 438
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P AR F +N G GR+N+ E G
Sbjct: 439 AF----PQGEAREFSSEQTRANSPTRGELQVWGRDNNSLSEAG 477
>gi|5931493|dbj|BAA84670.1| Gag polyprotein precursor [Human immunodeficiency virus 1]
Length = 498
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C AL K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRALRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRALRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|225708204|gb|ACO09948.1| Zinc finger CCHC domain-containing protein 9 [Osmerus mordax]
Length = 293
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKIQCYIC 523
CF + H +DCP ++ + + C RCG + H++ C + D+ +C+IC
Sbjct: 154 CFNCRKPGHGLADCPEAERDEEMGRDICYRCGSTEHEIQRCRAKIDPALDEYPYAKCFIC 213
Query: 524 KSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
GHL C N + SC CG H +C A N
Sbjct: 214 GKMGHLSRSCSDNPKGLYAAGGSCRVCGSVEHFQKDCPEHQAATN 258
>gi|340923585|gb|EGS18488.1| hypothetical protein CTHT_0050900 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 642
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 53/140 (37%), Gaps = 27/140 (19%)
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE----GEYHADDLKKIQCYI------ 522
EH A PG + + FC+ C SGH + C AD + QC
Sbjct: 365 EHRAHYFPGAE----IHETFCIVCASSGHSSNHCPELTCKHCQADWHRPWQCPTRQRCGK 420
Query: 523 CKSFGHL--CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEAL---NGKKSNL------ 571
CK GH C I+ + + C +C H +C ++ G++S L
Sbjct: 421 CKQLGHHKRQCREKLILPVDERDCAHCASRDHQDHQCPTLVKSFIVREGEESRLRKVQAV 480
Query: 572 --ICYKCGKEGHFARRCGSN 589
CY CG +GH+ C N
Sbjct: 481 PIYCYSCGAKGHYGPECWVN 500
>gi|403216232|emb|CCK70729.1| hypothetical protein KNAG_0F00600 [Kazachstania naganishii CBS
8797]
Length = 157
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC--- 479
C NCG+ H + C + + ++K C+ CG H C Q CF + H++ DC
Sbjct: 25 CYNCGQPGHVQSECTLPRTVEHKQCYNCGETGHVKSECSV-QRCFNCNQTGHISKDCTEP 83
Query: 480 ----PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
G +S C +CG H C+ E +CY C +FGH+
Sbjct: 84 RKPRAQAAGGRGMS---CYKCGGPNHLARDCQQE-------DTKCYSCGNFGHI--SRDC 131
Query: 536 IIGLKQVSCYNCGQSGHLGPEC 557
G CYNC QSGH+ +C
Sbjct: 132 PDGPGDKVCYNCNQSGHISRDC 153
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 444 NKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGH 501
+K CF+CG H + C + C+ H+ S+C P T + C CG++GH
Sbjct: 3 SKACFVCGKIGHLAEECDSDKLCYNCGQPGHVQSECTLPRT-----VEHKQCYNCGETGH 57
Query: 502 DLSSCEGEYHADDLKKIQCYICKSFGHLC--CVN-----SSIIGLKQVSCYNCGQSGHLG 554
S C + +C+ C GH+ C + G + +SCY CG HL
Sbjct: 58 VKSECSVQ---------RCFNCNQTGHISKDCTEPRKPRAQAAGGRGMSCYKCGGPNHLA 108
Query: 555 PECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRL 594
+C ++ + CY CG GH +R C D++
Sbjct: 109 RDC---------QQEDTKCYSCGNFGHISRDCPDGPGDKV 139
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 410 RKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD---C 466
RKPR G +C CG NH A C Q+++ C+ CG+F H ++C G C
Sbjct: 84 RKPR-AQAAGGRGMSCYKCGGPNHLARDC--QQEDTKCYSCGNFGHISRDCPDGPGDKVC 140
Query: 467 FINKGSEHLASDCPGT 482
+ S H++ DCP T
Sbjct: 141 YNCNQSGHISRDCPET 156
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 48/123 (39%), Gaps = 36/123 (29%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV---SC 544
+SS C CG GH C+ +D L CY C GH V S + V C
Sbjct: 1 MSSKACFVCGKIGHLAEECD----SDKL----CYNCGQPGH---VQSECTLPRTVEHKQC 49
Query: 545 YNCGQSGHLGPECANSCEALNGKKSNLI---------------------CYKCGKEGHFA 583
YNCG++GH+ EC+ N ++ I CYKCG H A
Sbjct: 50 YNCGETGHVKSECSVQ-RCFNCNQTGHISKDCTEPRKPRAQAAGGRGMSCYKCGGPNHLA 108
Query: 584 RRC 586
R C
Sbjct: 109 RDC 111
>gi|82568581|dbj|BAE48535.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 884
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCGKEGH + C + R DL
Sbjct: 388 KTVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFFR-EDL 438
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P AR F +N G GR+N+ E G
Sbjct: 439 AF----PQGEAREFSSEQTRANSPTRGELQVWGRDNNSISEAG 477
>gi|405953737|gb|EKC21340.1| Zinc finger CCHC domain-containing protein 9 [Crassostrea gigas]
Length = 232
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C+ +GS HL SDCP + + C +CG + H S C + +C+IC
Sbjct: 125 CYNCRGSGHLMSDCPEAKRDIEQGTGICFKCGSTEHSASRCSVKLPPGKFPYAKCFICGE 184
Query: 526 FGHL 529
GHL
Sbjct: 185 TGHL 188
>gi|146104184|ref|XP_001469753.1| putative poly-zinc finger protein 2 [Leishmania infantum JPCM5]
gi|398024250|ref|XP_003865286.1| poly-zinc finger protein 2, putative [Leishmania donovani]
gi|134074123|emb|CAM72865.1| putative poly-zinc finger protein 2 [Leishmania infantum JPCM5]
gi|322503523|emb|CBZ38609.1| poly-zinc finger protein 2, putative [Leishmania donovani]
Length = 135
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 54/144 (37%), Gaps = 17/144 (11%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC-----KQGQDCFINKGSEHLASD 478
C CG H + C + PCF CG H K C + CF + H A D
Sbjct: 2 VCYRCGGVGHQSRECTSAADSAPCFRCGKPGHVAKECVSTITAEEAPCFYCQKPGHRARD 61
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL--CCVNSSI 536
CP + + C C GH S C H CY+C GH+ C +
Sbjct: 62 CP--EAPPKSETVMCYNCSQKGHIASECTNPAH--------CYLCNEDGHIGRSCPTAPK 111
Query: 537 IGLKQVSCYNCGQSGHLGPECANS 560
+C CG+ GHL +C ++
Sbjct: 112 RSAADKTCRKCGKKGHLRKDCPDA 135
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 492 FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQ 549
C RCG GH C AD C+ C GH+ CV S I ++ C+ C +
Sbjct: 2 VCYRCGGVGHQSRECTSA--ADSAP---CFRCGKPGHVAKECV--STITAEEAPCFYCQK 54
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH A C K ++CY C ++GH A C
Sbjct: 55 PGHR----ARDCPEAPPKSETVMCYNCSQKGHIASEC 87
>gi|426194506|gb|EKV44437.1| hypothetical protein AGABI2DRAFT_120567 [Agaricus bisporus var.
bisporus H97]
Length = 369
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + G+K + C+ CGK GH A+ C SN R+R
Sbjct: 296 CHKCGKFGHIGKNCEEKKKNF-GEKKSFKCFSCGKFGHIAKNCRSNRSGRIR 346
>gi|345308224|ref|XP_001509565.2| PREDICTED: zinc finger CCHC domain-containing protein 7-like
[Ornithorhynchus anatinus]
Length = 564
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 59/155 (38%), Gaps = 32/155 (20%)
Query: 413 RYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC--KQGQDCFINK 470
RY+ G + TC NC + H + C + +++ C LCG H NC + DC +
Sbjct: 245 RYYS--GNKNVTCRNCRERGHLSKNCPLPQKSPTCCLCGVRGHLQYNCPARLCLDCSLPA 302
Query: 471 GSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG---EYH----ADDLKKIQCYIC 523
H + P + C RC GH +C +YH KK + Y
Sbjct: 303 SYPHKCFEKPSWKKN-------CHRCDMMGHYADACPEIWRQYHLTTRPGPPKKPKTYSG 355
Query: 524 KSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
+S V CYNC Q GH G EC
Sbjct: 356 RS--------------ALVYCYNCSQKGHYGFECT 376
>gi|427783995|gb|JAA57449.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 178
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +C GH C+ A+D +CY C GH+ G ++SCYNCG+ GH
Sbjct: 62 CYKCNRIGHFARDCK---EAED----RCYRCNGTGHI--SKDCQHGPDEMSCYNCGKMGH 112
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLL---FTAERPPTR 609
+ EC K+ CY C K+GH +R C +D R+S + FT P R
Sbjct: 113 IAREC---------KEQEKTCYICHKQGHISRDCE---QDERRVSTAVSTAFTTLWPLFR 160
Query: 610 A 610
A
Sbjct: 161 A 161
>gi|426192171|gb|EKV42109.1| hypothetical protein AGABI2DRAFT_123230 [Agaricus bisporus var.
bisporus H97]
Length = 369
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + G+K + C+ CGK GH A+ C SN R+R
Sbjct: 296 CHKCGKFGHIGKNCEEKKKNF-GEKKSFKCFSCGKFGHIAKNCRSNRSGRIR 346
>gi|334884422|gb|AEH21322.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|426195236|gb|EKV45166.1| hypothetical protein AGABI2DRAFT_120132 [Agaricus bisporus var.
bisporus H97]
Length = 369
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + G+K + C+ CGK GH A+ C SN R+R
Sbjct: 296 CHKCGKFGHIGKNCEEKKKNF-GEKKSFKCFSCGKFGHIAKNCRSNRSGRIR 346
>gi|299929951|gb|ADJ58183.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH+ + G +++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 373 GHIMMQGGNFKGPRRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 424
Query: 587 G---SNFKDRLRISD 598
+NF ++ S+
Sbjct: 425 TERQANFLGKIWPSN 439
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCG+E H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGREGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|254667128|gb|ACT76508.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|426200391|gb|EKV50315.1| hypothetical protein AGABI2DRAFT_115378 [Agaricus bisporus var.
bisporus H97]
Length = 338
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + G+K + C+ CGK GH A+ C SN R+R
Sbjct: 265 CHKCGKFGHIGKNCEEKKKNF-GEKKSFKCFSCGKFGHIAKNCRSNRSGRIR 315
>gi|334884426|gb|AEH21324.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 497
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GXKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|324121179|gb|ADY18650.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C+A K C+KCGKEGH + C +NF R+
Sbjct: 380 GQKRIKCFNCGKEGHL----ARNCKAPRRKG----CWKCGKEGHQMKDCTERQANFLGRI 431
Query: 595 RISDLL----FTAERPPTRARHFVGSNGTPHG-----LGNAQG 628
S F RP A F S+ P LG A+G
Sbjct: 432 WPSHKGRPGNFPQSRPEPTAPPFPQSSLEPTAPPAESLGKAEG 474
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A CK ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 386 CFNCGKEGHLARNCKAPRR-KGCWKCGKEGHQMKDCTERQANFLGR 430
>gi|307170501|gb|EFN62746.1| hypothetical protein EAG_09711 [Camponotus floridanus]
Length = 306
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 532 VNSSIIGL--KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
VN+ I L +Q+ C+ C + GH+ +C++ G CY+CGKEGH AR C S
Sbjct: 119 VNARIEALEPRQLQCFKCLEKGHVQAQCSS------GVNRAACCYRCGKEGHIARDCQSP 172
Query: 590 FK 591
K
Sbjct: 173 VK 174
>gi|429249268|gb|AFZ77678.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|429249228|gb|AFZ77658.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|254667173|gb|ACT76538.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|114841981|dbj|BAF32408.1| Gag [Human immunodeficiency virus 1]
Length = 494
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
S H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH R
Sbjct: 368 SQAHIMMQRGNFKGQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMR 419
Query: 585 RCGS----NFKDRLRISD 598
C + NF ++ S+
Sbjct: 420 DCTTERQVNFLGKIWPSN 437
>gi|429249218|gb|AFZ77653.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|374429988|gb|AEZ51269.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 490
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 379 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 430
Query: 595 RISD 598
S+
Sbjct: 431 WPSN 434
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 385 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 429
>gi|374429925|gb|AEZ51222.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 491
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 380 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 431
Query: 595 RISD 598
S+
Sbjct: 432 WPSN 435
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 386 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 430
>gi|449514793|ref|XP_004174662.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCHC domain-containing
protein 9 [Taeniopygia guttata]
Length = 232
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEY--HADDLKKI 518
K CF + H +DCP + ++ + C RCG + HDLS+ + + A
Sbjct: 87 KNAMVCFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDLSNXQSQVDPAAGPFPYA 146
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+C+IC GHL C N + + C CG H +C
Sbjct: 147 KCFICGEMGHLSRSCPDNPKGLYAEGGGCKLCGSVEHFKKDC 188
>gi|226246544|ref|NP_001139665.1| vasa protein [Strongylocentrotus purpuratus]
gi|223056284|gb|ACM80369.1| vasa [Strongylocentrotus purpuratus]
Length = 766
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQ---CYICKSFGHLC--------CVNSSIIGLKQ 541
C +C + GH C + + CY C GH+ G
Sbjct: 146 CYKCQEEGHMARDCPNGDSSGGGRGGGDRSCYNCGETGHMSRECPTKDSSGGGRGGGGGD 205
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
SCYNCG++GH+ EC + G C++C +EGHFA+ C
Sbjct: 206 RSCYNCGETGHMSRECPTKDSSGGGGGGGGKCFRCQEEGHFAKEC 250
>gi|390602049|gb|EIN11442.1| hypothetical protein PUNSTDRAFT_83058 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 356
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 466 CFINKGSEHLASDCP-----GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADD-LKKIQ 519
CF + H A+DCP T QG ++ C RCG S H LS C ++ L
Sbjct: 143 CFACRERGHAAADCPKAGESSTSQG--ATTGICYRCGSSRHTLSRCRKTADPENPLPFAS 200
Query: 520 CYICKSFGHLC--CVNSSIIGLKQVS--CYNCGQSGHLGPEC 557
C++C GHL C +++ G+ C C Q HL +C
Sbjct: 201 CFVCSGKGHLASTCPSNAEKGIYPNGGCCKLCSQKTHLARDC 242
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 18/101 (17%)
Query: 424 TCSNCGKENHTAATCKMQKQNKP--------CFLCGSFKHRWKNCKQGQD---------C 466
TC C + H AA C ++ C+ CGS +H C++ D C
Sbjct: 142 TCFACRERGHAAADCPKAGESSTSQGATTGICYRCGSSRHTLSRCRKTADPENPLPFASC 201
Query: 467 FINKGSEHLASDCPG-TDQGNNLSSNFCLRCGDSGHDLSSC 506
F+ G HLAS CP ++G + C C H C
Sbjct: 202 FVCSGKGHLASTCPSNAEKGIYPNGGCCKLCSQKTHLARDC 242
>gi|254667182|gb|ACT76544.1| gag protein [Human immunodeficiency virus 1]
Length = 466
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 352 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 403
Query: 595 RISD 598
S+
Sbjct: 404 WPSN 407
>gi|255931619|ref|XP_002557366.1| Pc12g05190 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581985|emb|CAP80146.1| Pc12g05190 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 182
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 69/187 (36%), Gaps = 45/187 (24%)
Query: 416 DPPGWNSETCSN---CGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGS 472
D P + TC N C + H + C+ + K C+ CG H + C QG D GS
Sbjct: 23 DCPKKGNPTCPNSYNCNGQGHLSRECQEPAKEKSCYRCGQTGHLSRECPQGGDSNYGGGS 82
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE-------------GEYHADDLKKIQ 519
+ C +CG GH +C G + ++
Sbjct: 83 QE------------------CYKCGQVGHIARNCSQGGNYGGYSAGGYGGFGGAGGRQQT 124
Query: 520 CYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
CY C FGH+ G K CYNCG+ GH+ +C K +CYKC +
Sbjct: 125 CYSCGGFGHM--ARDCTQGQK---CYNCGEVGHVSRDCPTE------AKGERMCYKCKQP 173
Query: 580 GHFARRC 586
GH C
Sbjct: 174 GHVQSAC 180
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 31/179 (17%)
Query: 415 FDPPGWNSETCSNCGKENHTAATCKMQKQNKPC---FLCGSFKHRWKNCKQG---QDCFI 468
F P G C NCG+ +H A C +K N C + C H + C++ + C+
Sbjct: 3 FPPAGRGG--CFNCGEASHQAKDCP-KKGNPTCPNSYNCNGQGHLSRECQEPAKEKSCYR 59
Query: 469 NKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFG 527
+ HL+ +CP G D S C +CG GH +C +
Sbjct: 60 CGQTGHLSRECPQGGDSNYGGGSQECYKCGQVGHIARNCSQGGNYGGYSAGGY------- 112
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G +Q +CY+CG GH+ +C G+K CY CG+ GH +R C
Sbjct: 113 ----GGFGGAGGRQQTCYSCGGFGHMARDC------TQGQK----CYNCGEVGHVSRDC 157
>gi|61557124|ref|NP_001013174.1| zinc finger CCHC domain-containing protein 9 [Rattus norvegicus]
gi|54035475|gb|AAH83695.1| Zinc finger, CCHC domain containing 9 [Rattus norvegicus]
gi|149059001|gb|EDM10008.1| zinc finger, CCHC domain containing 9, isoform CRA_b [Rattus
norvegicus]
Length = 271
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + ++ + C RCG + H+++ C +
Sbjct: 125 KNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMTKCRANVDPALGEFPFA 184
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+C++C GHL C N+ + C CG H +C
Sbjct: 185 KCFVCGEMGHLSRSCPDNTKGVYADGGGCKLCGSVEHFKKDC 226
>gi|403343293|gb|EJY70972.1| Arginine methyltransferase-interacting protein, contains RING
Zn-finger [Oxytricha trifallax]
Length = 869
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C NC + H A C + + C LCG H +C + + CF HLAS C
Sbjct: 395 CRNCLEYGHIARECTNKTKRPNCILCGKDTHDSFSCNE-KSCFKCNKIGHLASQCTER-- 451
Query: 485 GNNLSSNFCLRCGDSGHDLSSC----EGEYHADDLKKIQCYICKSFGHLCCV 532
N++ C RC GH + C +G Y+ + ++C C S GHL C+
Sbjct: 452 --NVTR--CNRCDLVGHKEARCLKVWKGNYNDSQMSLLRCIQCGSKGHLKCL 499
>gi|254667083|gb|ACT76478.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|407733805|gb|AFU27479.1| gag protein [Human immunodeficiency virus 1]
gi|407733813|gb|AFU27486.1| gag protein [Human immunodeficiency virus 1]
gi|407733853|gb|AFU27521.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 370 AHIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 421
Query: 587 G---SNFKDRLRISD 598
+NF R+ S+
Sbjct: 422 TERQANFLGRIWPSN 436
>gi|264687819|gb|ACY73900.1| gag protein [Small ruminant lentivirus]
Length = 242
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 10/44 (22%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GHL +C +S ICYKCGK+GH + C
Sbjct: 206 TCYNCGKPGHLARQC----------RSGKICYKCGKKGHLQKDC 239
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 386 AKDKVEDARKENEAKYNV-VLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQN 444
++K++ R+ + Y + +L LR R D G +TC NCGK H A C +
Sbjct: 170 VEEKLQACREVESSTYKMQLLAQALRPTRETDARG---QTCYNCGKPGHLARQC---RSG 223
Query: 445 KPCFLCGSFKHRWKNCKQG 463
K C+ CG H K+C+QG
Sbjct: 224 KICYKCGKKGHLQKDCRQG 242
>gi|389746630|gb|EIM87809.1| hypothetical protein STEHIDRAFT_24788, partial [Stereum hirsutum
FP-91666 SS1]
Length = 174
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH--LCCVNSSIIGLKQVSCYNCGQS 550
C +CG+ GH +C E + CY C+ GH C + + KQ CY+CG
Sbjct: 5 CFKCGNLGHIAENCSSE-------QRLCYNCRQPGHESSACPSPRTVSSKQ--CYSCGGV 55
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFTAERPPTRA 610
GH+ E C +L + N CY CG+ GH AR C + + A R P
Sbjct: 56 GHIQAE----CPSLRVQGGNQKCYNCGRFGHIARVCPGGAGLPGGLGGAMGFATRAPPPG 111
Query: 611 R 611
R
Sbjct: 112 R 112
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 64/183 (34%), Gaps = 54/183 (29%)
Query: 445 KPCFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
K CF CG+ H +NC Q C+ + H +S CP +SS C CG GH
Sbjct: 3 KGCFKCGNLGHIAENCSSEQRLCYNCRQPGHESSACPSP---RTVSSKQCYSCGGVGHIQ 59
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLC--C--------------------------VNSS 535
+ C +K CY C FGH+ C +N+S
Sbjct: 60 AECPSLRVQGGNQK--CYNCGRFGHIARVCPGGAGLPGGLGGAMGFATRAPPPGRGLNTS 117
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL--------------ICYKCGKEGH 581
L V CY CG H+ A C A G CYKC +EGH
Sbjct: 118 A--LPPVKCYRCGGPNHM----ARDCLAAAGTDGAAINGGGAGGGFTKSKTCYKCQQEGH 171
Query: 582 FAR 584
R
Sbjct: 172 VCR 174
>gi|326417084|gb|ADZ73385.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|326416979|gb|ADZ73334.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|299930139|gb|ADJ58277.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKKIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|82568569|dbj|BAE48527.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 884
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCGKEGH + C + R DL
Sbjct: 388 KTVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFFR-EDL 438
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P AR F +N G GR+N+ E G
Sbjct: 439 AF----PQGEAREFSSEQTRANSPTRGELQVWGRDNNSISEAG 477
>gi|443894984|dbj|GAC72330.1| E3 ubiquitin ligase interacting with arginine methyltransferase
[Pseudozyma antarctica T-34]
Length = 446
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 20/112 (17%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLS---------------SNFCLRCGDSGHDLSSC-EGE 509
CF +G H A DCP +++ C RCG + H LS C +
Sbjct: 261 CFACRGMGHSAKDCPNALDAQSIALKSDRADAPMVGRDAVGICFRCGSTEHTLSKCRKPA 320
Query: 510 YHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQV--SCYNCGQSGHLGPEC 557
D+L C+IC + GHL C N++ G+ SC C HL +C
Sbjct: 321 LKNDELPYATCFICHAKGHLSSKCPNNAGRGVYPEGGSCKLCSSVEHLAKDC 372
>gi|374430152|gb|AEZ51392.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKKIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|238878610|gb|EEQ42248.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 381
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 86/226 (38%), Gaps = 71/226 (31%)
Query: 369 VGERQQKKRRKKTRVIEAKDK----VEDARKENEAKYNVV------LRMLLRKPRYF--- 415
GE+ ++++ K+ +E+K++ +++ Y+ V L L + RYF
Sbjct: 12 TGEKFKRQKYKEQSFVESKERGSRDIKEHTPTTALSYDEVNDDLDELVALRGEGRYFGVT 71
Query: 416 ---DPPGWNSET----CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
D G + ++ C+NC K HT A C + C CG+
Sbjct: 72 DPDDESGISRQSLGPLCANCYKRGHTRAKCTVVI----CHKCGAI--------------- 112
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
+H S CP T C RCG+ GH +S C+ + K+ C C SF H
Sbjct: 113 ---DDHYESQCPTTI--------ICSRCGEKGHIVSQCKSKIR----KRQYCRTCDSFKH 157
Query: 529 ----LCCVNSSIIG-------------LKQVSCYNCGQSGHLGPEC 557
+ S I L ++ CYNC + H G EC
Sbjct: 158 GDENCPSIWRSYITKSPSQGENEESSVLPRIYCYNCASNEHFGDEC 203
>gi|58267432|ref|XP_570872.1| DNA-binding protein hexbp [Cryptococcus neoformans var. neoformans
JEC21]
gi|134111917|ref|XP_775494.1| hypothetical protein CNBE2080 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258153|gb|EAL20847.1| hypothetical protein CNBE2080 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227106|gb|AAW43565.1| DNA-binding protein hexbp, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 204
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 68/196 (34%), Gaps = 43/196 (21%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD--CFINKGSEHLASDCPG 481
+C CG++ H AA C + C+ CG H + C Q ++ C+ HL+S CP
Sbjct: 9 SCFKCGQQGHVAAACPAEAPT--CYNCGLSGHLSRECPQPKNKACYTCGQEGHLSSACPQ 66
Query: 482 TDQGNNLSSNF----CLRCGDSGHDLSSCEGEYHADDLKKI-----------------QC 520
C RCG GH C A C
Sbjct: 67 GSGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAGGYGGFGGGAGFGNKSC 126
Query: 521 YICKSFGHL---CCVNSSIIGLKQVS-------CYNCGQSGHLGPECANSCEALNGKKSN 570
Y C GH+ C +S CYNCGQ GH+ EC ++
Sbjct: 127 YTCGGVGHISRECPSGASRGFGGGGGGFGGPRKCYNCGQDGHISRECP--------QEQG 178
Query: 571 LICYKCGKEGHFARRC 586
CY CG+ GH A C
Sbjct: 179 KTCYSCGQPGHIASAC 194
>gi|409684520|gb|AFV34416.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|409079955|gb|EKM80316.1| hypothetical protein AGABI1DRAFT_14624, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426198281|gb|EKV48207.1| hypothetical protein AGABI2DRAFT_43852, partial [Agaricus bisporus
var. bisporus H97]
Length = 130
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH--LCCVNSSIIGLKQVSCYNCGQS 550
C +CG+ GH +C E + CY C+ GH C + + KQ CY+CG
Sbjct: 5 CFKCGNLGHIAENCSSE-------QRLCYNCRQAGHESSACPSPRTVATKQ--CYSCGGV 55
Query: 551 GHLGPECANSCEALNGKKS-NLICYKCGKEGHFARRC 586
GH+ EC +L ++ N CY CG+ GHFAR C
Sbjct: 56 GHIQAEC----PSLRVQQGGNQKCYNCGRFGHFARSC 88
>gi|355679967|gb|AER96442.1| CCHC-type zinc finger, nucleic acid binding protein [Mustela
putorius furo]
Length = 162
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 42/153 (27%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C +Q+ + C+ CG H K+CK+ P
Sbjct: 52 DICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKE-----------------PKR 94
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C+ HAD+ K CY C FGH+ +V
Sbjct: 95 ER-----EQCCYNCGKPGHLARDCD---HADEQK---CYSCGEFGHI------QKDCTKV 137
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
CY CG++GH+ C+ K S + CY+
Sbjct: 138 KCYGCGETGHVAINCS--------KTSEVNCYR 162
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 30/121 (24%)
Query: 488 LSSNFCLRCGDSGHDLSSCEG----------------------EYHADDLKKIQCYICKS 525
+SSN C +CG SGH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDI-CYRCGE 59
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
GHL + +CYNCG+ GH+ +C ++ CY CGK GH AR
Sbjct: 60 SGHL--AKDCDLQEDVEACYNCGRGGHIAKDCKEP-----KREREQCCYNCGKPGHLARD 112
Query: 586 C 586
C
Sbjct: 113 C 113
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 34/143 (23%)
Query: 465 DCFINKGSEHLASDCPG-----------------TDQGNNLSS----NFCLRCGDSGHDL 503
+CF S H A +CP +D+G S + C RCG+SGH
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLA 64
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
C+ + +D++ CY C GH+ ++ CYNCG+ GHL A C+
Sbjct: 65 KDCDLQ---EDVEA--CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHL----ARDCDH 115
Query: 564 LNGKKSNLICYKCGKEGHFARRC 586
+ +K CY CG+ GH + C
Sbjct: 116 ADEQK----CYSCGEFGHIQKDC 134
>gi|326935322|ref|XP_003213722.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like,
partial [Meleagris gallopavo]
Length = 200
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 24/129 (18%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
K CF + H +DCP + ++ + C RCG + HD+ C+ +
Sbjct: 93 KNAMVCFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDIGKCKAK----------- 141
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
++ ++ C+ CG+ GHL C ++ + L + C CG
Sbjct: 142 -----------IDPAVGAFPYAKCFICGEMGHLSRSCPDNPKGLYAEGG--CCRLCGSVE 188
Query: 581 HFARRCGSN 589
H+ + C N
Sbjct: 189 HYRKDCPEN 197
>gi|255710801|ref|XP_002551684.1| KLTH0A05214p [Lachancea thermotolerans]
gi|238933061|emb|CAR21242.1| KLTH0A05214p [Lachancea thermotolerans CBS 6340]
Length = 396
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 66/162 (40%), Gaps = 31/162 (19%)
Query: 405 LRMLLRKPRYF---DP--PGWNSET-CSNCGKENHTAATCKMQKQNKPCFLCGSFK-HRW 457
LR L K RYF DP P ++E C+NC + H C C CG H
Sbjct: 68 LRYLRGKGRYFGVDDPSDPSLDAEPKCNNCSQRGHLKRNCPHVI----CAYCGIMDDHYT 123
Query: 458 KNCKQGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLK 516
+ C + C N G E H S CP Q + +C C H C + + L+
Sbjct: 124 QQCPKAIKC-ANCGEEGHYRSQCP--RQARRI---YCTECNSKNHARERCPSIWRSYYLR 177
Query: 517 KIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
+ ++F + +++V CYNCG GH G +C+
Sbjct: 178 E------RTF-------HRTLHIERVFCYNCGHQGHFGDDCS 206
>gi|31559652|dbj|BAC77477.1| Gag-Pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 1434
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCGKEGH + C + R DL
Sbjct: 387 KIVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFFR-EDL 437
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P +AR F +N G GR+N+ E G
Sbjct: 438 AF----PQGKAREFPSEQTRANSPTRGELQVWGRDNNLISEAG 476
>gi|407737295|gb|AFU30424.1| gag protein [Human immunodeficiency virus 1]
gi|407737303|gb|AFU30431.1| gag protein [Human immunodeficiency virus 1]
gi|407737311|gb|AFU30438.1| gag protein [Human immunodeficiency virus 1]
gi|407737319|gb|AFU30445.1| gag protein [Human immunodeficiency virus 1]
gi|407737335|gb|AFU30459.1| gag protein [Human immunodeficiency virus 1]
gi|407737343|gb|AFU30466.1| gag protein [Human immunodeficiency virus 1]
gi|407737351|gb|AFU30473.1| gag protein [Human immunodeficiency virus 1]
gi|407737359|gb|AFU30480.1| gag protein [Human immunodeficiency virus 1]
gi|407737367|gb|AFU30487.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|299929691|gb|ADJ58053.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 390 GQKKIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 441
Query: 595 RISD 598
S+
Sbjct: 442 WPSN 445
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 396 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 440
>gi|343420304|emb|CCD19151.1| hypothetical protein, conserved in T. vivax [Trypanosoma vivax
Y486]
Length = 605
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 23/126 (18%)
Query: 474 HLASDCPGTDQGNNLSSNF--CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
H DCP + S+ C CG S H + C + +K ++C+ C GH+
Sbjct: 35 HFKEDCPHRRKRPRADSDIGICRSCGSSSHAQAKCP-----ERIKSVECFQCHQKGHM-- 87
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFK 591
+ Q C+NCG G+ C N +C+ C GH + C N
Sbjct: 88 ----MPMCPQTRCFNCGHFGYGSELCTN----------KPVCFHCSMPGHTSTECLVNGM 133
Query: 592 DRLRIS 597
RLR S
Sbjct: 134 GRLRYS 139
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 34/164 (20%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C +CG +H A C + ++ CF C H C Q + CF +C
Sbjct: 56 CRSCGSSSHAQAKCPERIKSVECFQCHQKGHMMPMCPQTR-CF----------NCGHFGY 104
Query: 485 GNNLSSN--FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
G+ L +N C C GH + C + + +++ Y C+ GH +
Sbjct: 105 GSELCTNKPVCFHCSMPGHTSTECL----VNGMGRLR-YSCEEPGH-----DMAKCPQSP 154
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY C Q+GHL +C ++C +C ++GH A C
Sbjct: 155 QCYMCNQTGHLVAQCPE-----------VLCNRCHQKGHMASAC 187
>gi|254667143|gb|ACT76518.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GPKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLAKNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|124299461|gb|ABN04665.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 469
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 20/100 (20%)
Query: 532 VNSSIIGL---------KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
VNS+ I + K V C+NCG+ GH+ A +C A K C+KCG+EGH
Sbjct: 340 VNSATIMMQKGNFRNQRKPVKCFNCGKEGHV----ARNCRAPRKKG----CWKCGREGHQ 391
Query: 583 ARRCG---SNFKDRLRISDLLFTAERPPTRARHFVGSNGT 619
+ C +NF ++ S L T PTR VG T
Sbjct: 392 MKDCTERQANFLGKIWPSFLRXTRANSPTRRELQVGEETT 431
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 361 CFNCGKEGHVARNCRAPRK-KGCWKCGREGHQMKDCTERQANFLGK 405
>gi|429249160|gb|AFZ77624.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|407737327|gb|AFU30452.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|357619173|gb|EHJ71850.1| zinc finger protein [Danaus plexippus]
Length = 144
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 18/118 (15%)
Query: 474 HLASDCPGT-----DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
H A +C + D G N C +C +GH C+ E AD +CY C GH
Sbjct: 14 HFARECTQSGVGALDAGFNRQREKCFKCNRTGHFARDCKEE--AD-----RCYRCNGTGH 66
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ + SCYNC ++GH+ A +C SN CY C K GH +R C
Sbjct: 67 I--ARECAQSPDEPSCYNCNKTGHI----ARNCPEGGRDNSNQTCYNCNKTGHISRNC 118
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 26/129 (20%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
+Q + CF + H A DC ++ C RC +GH C A + C
Sbjct: 33 RQREKCFKCNRTGHFARDC-------KEEADRCYRCNGTGHIAREC-----AQSPDEPSC 80
Query: 521 YICKSFGHLCCVNSSIIGLKQVS---CYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
Y C GH+ + G + S CYNC ++GH+ C + G K+ CY CG
Sbjct: 81 YNCNKTGHI--ARNCPEGGRDNSNQTCYNCNKTGHISRNCPD------GTKT---CYVCG 129
Query: 578 KEGHFARRC 586
K GH +R C
Sbjct: 130 KPGHISRDC 138
>gi|253771018|gb|ACT35657.1| vasa-like protein [Haliotis asinina]
Length = 763
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C+ CG+ GH EC N+ ++ G+ + C+KCG+EGH +R C
Sbjct: 209 CFKCGEEGHFSRECPNA-DSSGGRGGSRACFKCGEEGHMSREC 250
>gi|409181590|gb|AFV26813.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K + C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 381 GQKTIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 432
Query: 595 RISDLL----FTAERPPTRARHFVGSNGTPHGLGNAQGRENDDQREKG 638
S+ F RP A S G + ++Q +E + R+KG
Sbjct: 433 WPSNKGRPGNFPQSRPEPTAPP-AESVGMGEEITSSQQQEQKEPRDKG 479
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 387 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 431
>gi|407740614|gb|AFU33193.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|407740569|gb|AFU33157.1| gag protein [Human immunodeficiency virus 1]
gi|407740574|gb|AFU33161.1| gag protein [Human immunodeficiency virus 1]
gi|407740584|gb|AFU33169.1| gag protein [Human immunodeficiency virus 1]
gi|407740594|gb|AFU33177.1| gag protein [Human immunodeficiency virus 1]
gi|407740599|gb|AFU33181.1| gag protein [Human immunodeficiency virus 1]
gi|407740609|gb|AFU33189.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|320591231|gb|EFX03670.1| arginine methyltransferase-interacting ring finger protein
[Grosmannia clavigera kw1407]
Length = 482
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 59/146 (40%), Gaps = 29/146 (19%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLS- 504
C C S+ HR K C F SE HL CP C + G+D +
Sbjct: 192 CISCSSYGHRAKQCPAKTCKFCGDKSENHLTLGCP--------KYRICQQHQQPGNDTAV 243
Query: 505 -----SCEGEYHADDLKKIQCYICKSFGH------------LCCVNSS-IIGLKQVSCYN 546
+G+ + KI C +C S+GH L C N + + V CY
Sbjct: 244 GVDRVPADGKSATEPEPKISCAMCGSWGHSMDKCSQIWCTYLPCPNKARKVRELPVFCYY 303
Query: 547 CGQSGHLGPECA-NSCEALNGKKSNL 571
CG++ H G +C N E L+G++ +L
Sbjct: 304 CGEAAHFGADCVLNYGEHLSGRQYSL 329
>gi|425774261|gb|EKV12574.1| hypothetical protein PDIG_43280 [Penicillium digitatum PHI26]
gi|425778540|gb|EKV16664.1| hypothetical protein PDIP_34510 [Penicillium digitatum Pd1]
Length = 185
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CG++ H C CY C GHL K+ SCY CGQ+GH
Sbjct: 11 CFNCGEASHQAKDC------PKKGNPTCYNCNGQGHL--SRECQEPAKEKSCYRCGQTGH 62
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
L EC + + CYKCG+ GH AR C
Sbjct: 63 LSRECPQGGDGNYSGGGSQECYKCGQVGHIARNC 96
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 69/191 (36%), Gaps = 50/191 (26%)
Query: 416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
D P + TC NC + H + C+ + K C+ CG + HL
Sbjct: 23 DCPKKGNPTCYNCNGQGHLSRECQEPAKEKSCYRCGQ-------------------TGHL 63
Query: 476 ASDCP--GTDQGNNLSSNFCLRCGDSGHDLSSCE------------------GEYHADDL 515
+ +CP G + S C +CG GH +C G
Sbjct: 64 SRECPQGGDGNYSGGGSQECYKCGQVGHIARNCSQGGNYGGGYSTGGYGGGFGGPGGAGG 123
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYK 575
++ CY C FGH+ G K CYNCG+ GH+ +C K +CYK
Sbjct: 124 RQQTCYSCGGFGHM--ARDCTQGQK---CYNCGEVGHVSRDCPTE------AKGERMCYK 172
Query: 576 CGKEGHFARRC 586
C + GH C
Sbjct: 173 CKQPGHVQSAC 183
>gi|77416882|sp|P12498.4|POL_HV1J3 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin
Length = 532
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K + C+NCG+ GHL A +C A K C+KCGKEGH + C + LR DL
Sbjct: 388 KIIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLR-EDL 438
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F +AR F +N G GR+N+ E G
Sbjct: 439 AFLQ----GKAREFSSEQTRANSPSRGELQVWGRDNNPLSEAG 477
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFL 434
>gi|407740589|gb|AFU33173.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|407740579|gb|AFU33165.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|254667098|gb|ACT76488.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|254667080|gb|ACT76476.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|405954050|gb|EKC21588.1| hypothetical protein CGI_10003680 [Crassostrea gigas]
Length = 241
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECA--------NSCEALN-GKKSNLICYKCGKEGHFARRCGS 588
G K SCY CG+ GH P+C S ++ N + SN C+ C KEGH+ + C
Sbjct: 94 GKKPGSCYTCGEPGHYSPDCPTKENNRGLTSQQSTNYSRPSNNNCFICKKEGHWMKDCPE 153
Query: 589 NFKDRL------RISDLLFTAERPPT 608
N K++ D RPPT
Sbjct: 154 NLKNKYWADQEHEAQDCPEKENRPPT 179
>gi|334884500|gb|AEH21361.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 487
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|299930101|gb|ADJ58258.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|254667086|gb|ACT76480.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|300123580|emb|CBK24852.2| unnamed protein product [Blastocystis hominis]
Length = 335
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 63/181 (34%), Gaps = 20/181 (11%)
Query: 422 SETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG---QDCFINKGSEHLASD 478
+ TC CG H + C + CF C H ++C + FI+ L
Sbjct: 125 TRTCHLCGNPGHLSRNCPLANTTNVCFFCAQPTHNSRSCPLVVCRRSIFISP----LMYR 180
Query: 479 CPGTDQGNNLSSN-----FCLRCGDSGHDLSSCEGEYHADD---LKKIQCYICKSFGHLC 530
C +N S FC C H C H D + + C C GHL
Sbjct: 181 CHKPGHESNACSEKSIPPFCHYCSSRLHQPDDCPIIPHPYDKAVFQLMHCVCCGKQGHLV 240
Query: 531 CVNSSIIGLKQVS-CYNCGQSGHLGPEC----ANSCEALNGKKSNLICYKCGKEGHFARR 585
C + C CG H +C ++ +++ C+ CGK GHFA +
Sbjct: 241 CKPQPALSKGYGGRCAVCGSPNHSYVQCPSRNSHRTAHTAAQENGGACFICGKMGHFASK 300
Query: 586 C 586
C
Sbjct: 301 C 301
>gi|254667056|gb|ACT76460.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|409684473|gb|AFV34374.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|254667107|gb|ACT76494.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFK 591
+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 381 NFTGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFL 432
Query: 592 DRLRISD 598
RL S+
Sbjct: 433 GRLWPSN 439
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|429249260|gb|AFZ77674.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|407733837|gb|AFU27507.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 370 AHIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 421
Query: 587 G---SNFKDRLRISD 598
+NF R+ S+
Sbjct: 422 TERQANFLGRIWPSN 436
>gi|346716306|ref|NP_001231149.1| zinc finger CCHC domain-containing protein 9 [Sus scrofa]
Length = 270
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Query: 461 KQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA--DDLKKI 518
K CF + H +DCP + + + C RCG + H++ C+ + +
Sbjct: 124 KNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEIIKCKAQVDPALGEFPFA 183
Query: 519 QCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+C++C GHL C N + C CG H +C S
Sbjct: 184 KCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPES 228
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 421 NSETCSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQGQD---------- 465
N+ C +C + H A C +N+ C+ CGS +H CK D
Sbjct: 125 NAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEIIKCKAQVDPALGEFPFAK 184
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKI 518
CF+ HL+ CP +G C CG H C ++D + +
Sbjct: 185 CFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPESKNSDQMVTV 237
>gi|426195603|gb|EKV45532.1| hypothetical protein AGABI2DRAFT_119218 [Agaricus bisporus var.
bisporus H97]
Length = 369
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + G+K + C+ CGK GH A+ C SN R+R
Sbjct: 296 CHKCGKFGHIGKNCEEKKKNF-GEKKSFKCFSCGKLGHIAKNCRSNRSGRIR 346
>gi|409684463|gb|AFV34365.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|407734319|gb|AFU27920.1| gag protein [Human immunodeficiency virus 1]
gi|407734327|gb|AFU27927.1| gag protein [Human immunodeficiency virus 1]
gi|407734335|gb|AFU27934.1| gag protein [Human immunodeficiency virus 1]
gi|407734343|gb|AFU27941.1| gag protein [Human immunodeficiency virus 1]
gi|407734364|gb|AFU27959.1| gag protein [Human immunodeficiency virus 1]
gi|407734369|gb|AFU27963.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 380 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTEKQANFLGRI 431
Query: 595 RISD 598
S+
Sbjct: 432 WPSN 435
>gi|299930059|gb|ADJ58237.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|409068612|gb|EKM73374.1| hypothetical protein AGABI1DRAFT_134904 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 196
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + G+K N C+ CGK GH A+ C SN R+R
Sbjct: 103 CHKCGKFGHIGKNCKEKKKNF-GEKKNFKCFSCGKFGHIAKDCRSNRSGRIR 153
>gi|321469269|gb|EFX80250.1| putative germ-line specific RNA helicase vasa protein [Daphnia
pulex]
Length = 761
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQS 550
C +CG+ GH C C+ C+ GH+ C G +C+ C Q
Sbjct: 131 CYKCGEEGHMSRECPNSNSGGGGGDRTCHKCQQPGHMARDCPTGGGGGGGDRTCHKCQQP 190
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH+ +C G + C+KC + GH AR C
Sbjct: 191 GHMARDCPT-----GGGGGDRACHKCQETGHMARDC 221
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 57/150 (38%), Gaps = 18/150 (12%)
Query: 445 KPCFLCGSFKHRWKNCKQG--------QDCFINKGSEHLASDCPGTDQGNNLSSNFCLRC 496
+ C+ CG H + C + C + H+A DCP T G C +C
Sbjct: 129 RACYKCGEEGHMSRECPNSNSGGGGGDRTCHKCQQPGHMARDCP-TGGGGGGGDRTCHKC 187
Query: 497 GDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPE 556
GH C D C+ C+ GH+ + G +C CG +GH+ E
Sbjct: 188 QQPGHMARDCPTGGGGGDRA---CHKCQETGHMARDCPTGGGGGPRTCNKCGDAGHMARE 244
Query: 557 CANSCEALNGKKSNLICYKCGKEGHFARRC 586
C + G + C+KC K GH + C
Sbjct: 245 CPS------GGGGDTKCFKCYKLGHSTKEC 268
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
H++ +CP ++ G C +C GH C + C+ C+ GH+
Sbjct: 139 HMSRECPNSNSGGGGGDRTCHKCQQPGHMARDCPTGGGGGGGDRT-CHKCQQPGHMARDC 197
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
+ G +C+ C ++GH+ +C G C KCG GH AR C S
Sbjct: 198 PTGGGGGDRACHKCQETGHMARDCPTG-----GGGGPRTCNKCGDAGHMARECPS 247
>gi|299930269|gb|ADJ58342.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|134140571|gb|ABO61044.1| gag protein [Simian immunodeficiency virus]
Length = 505
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 8/45 (17%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
CYNCGQ GH+ A SC +K C+KCG+EGH A++C S
Sbjct: 395 CYNCGQFGHM----ARSCPKPKTRK----CFKCGREGHLAKQCRS 431
>gi|31980426|dbj|BAC77746.1| Gag polyprotein [Human immunodeficiency virus 1]
gi|31980436|dbj|BAC77755.1| Gag polyprotein [Human immunodeficiency virus 1]
Length = 498
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 11/66 (16%)
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFK 591
SI G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 381 SIRGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFL 432
Query: 592 DRLRIS 597
++ S
Sbjct: 433 GKIWPS 438
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|264687815|gb|ACY73898.1| gag protein [Small ruminant lentivirus]
Length = 242
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 10/44 (22%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GHL +C +S ICYKCGK+GH + C
Sbjct: 206 TCYNCGKPGHLARQC----------RSGKICYKCGKKGHMQKDC 239
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 388 DKVEDARKENEAKYNV-VLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKP 446
+K++ R+ + Y + +L LR R D G +TC NCGK H A C + K
Sbjct: 172 EKLQACREVESSTYKMQLLAQALRPTREKDARG---QTCYNCGKPGHLARQC---RSGKI 225
Query: 447 CFLCGSFKHRWKNCKQG 463
C+ CG H K+C+QG
Sbjct: 226 CYKCGKKGHMQKDCRQG 242
>gi|429249166|gb|AFZ77627.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|77416884|sp|P04588.3|POL_HV1MA RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1440
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRIS 597
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C + LR
Sbjct: 392 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLR-E 442
Query: 598 DLLFTAERPPTRARHF 613
+L F P +AR F
Sbjct: 443 NLAF----PQGKAREF 454
>gi|409684453|gb|AFV34356.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|343427414|emb|CBQ70941.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 454
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 47/115 (40%), Gaps = 23/115 (20%)
Query: 466 CFINKGSEHLASDCPG----------TDQGNNLSS--------NFCLRCGDSGHDLSSC- 506
CF +G H A DCP TD ++ + C RCG + H LS C
Sbjct: 267 CFACRGMGHSAKDCPNALDAQSISLKTDTASSTDTPMIGRDAVGICFRCGSTEHTLSKCR 326
Query: 507 EGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQV--SCYNCGQSGHLGPEC 557
+ D L C+IC + GHL C N++ G+ SC C HL +C
Sbjct: 327 KPTLKNDALPYATCFICHAKGHLSSKCPNNAGRGVYPEGGSCKLCSSVEHLAKDC 381
>gi|264687817|gb|ACY73899.1| gag protein [Small ruminant lentivirus]
Length = 242
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 10/44 (22%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GHL +C +S ICYKCGK+GH + C
Sbjct: 206 TCYNCGKPGHLARQC----------RSGKICYKCGKKGHMQKDC 239
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 388 DKVEDARKENEAKYNV-VLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKP 446
+K++ R+ + Y + +L LR R D G +TC NCGK H A C + K
Sbjct: 172 EKLQACREVESSTYKMQLLAQALRPTREKDARG---QTCYNCGKPGHLARQC---RSGKI 225
Query: 447 CFLCGSFKHRWKNCKQG 463
C+ CG H K+C+QG
Sbjct: 226 CYKCGKKGHMQKDCRQG 242
>gi|254667140|gb|ACT76516.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 18/110 (16%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI------NKG------- 471
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ NKG
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGRLWPSNKGRPGNFPQ 448
Query: 472 --SEHLASDCPGTDQGNNLSSNFCLRCGDSGH--DLSSCEGEYHADDLKK 517
+E A G ++S+ D GH L S + + D L +
Sbjct: 449 SRTEPTAPPAENWGMGEEITSSLKQEQKDQGHPPPLVSLKSLFGNDPLSQ 498
>gi|2745748|gb|AAC97532.1| gag-pol polyprotein [Human immunodeficiency virus 1]
Length = 1433
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 8/49 (16%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G K++ C+NCG+ GHL A +C AL K C+KCGKEGH + C
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRALRKKG----CWKCGKEGHQMKDC 424
>gi|409684503|gb|AFV34401.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|70993356|ref|XP_751525.1| zinc knuckle transcription factor (CnjB) [Aspergillus fumigatus
Af293]
gi|66849159|gb|EAL89487.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
fumigatus Af293]
Length = 509
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 64/167 (38%), Gaps = 45/167 (26%)
Query: 425 CSNCGKENHTAATCK-----MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
C NCG+ HTA CK + + C C + HR ++C + + +++ EH A+DC
Sbjct: 287 CGNCGEMGHTARGCKEERALVDRVEVKCVNCNASGHRARDCTEPR---VDRSPEHKAADC 343
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
P + C RC + GH C H +
Sbjct: 344 PNPRSAEGVE---CKRCNEMGHFAKDC----HQAPAPR---------------------- 374
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+C NCG H+ +C +A S + C C + GHF+R C
Sbjct: 375 ---TCRNCGSEDHMARDCDKPRDA-----SIVTCRNCEEVGHFSRDC 413
>gi|407734359|gb|AFU27955.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 380 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTEKQANFLGRI 431
Query: 595 RISD 598
S+
Sbjct: 432 WPSN 435
>gi|326416995|gb|ADZ73342.1| gag protein [Human immunodeficiency virus 1]
Length = 505
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 380 AHIMMQRGNFKGQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 431
Query: 587 G---SNFKDRLRISD 598
+NF +L S+
Sbjct: 432 TERQANFLGKLWPSN 446
>gi|301108595|ref|XP_002903379.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097751|gb|EEY55803.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 157
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 27/169 (15%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASD 478
G + C NCG+ H C + F G + G CF + HL D
Sbjct: 5 GADQRKCHNCGQGGHLRRDCPEAPSQEGGF--GGYN-------SGAACFGCGKTGHLKRD 55
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
CP + C CG GH C ++ + +C+ C GHL
Sbjct: 56 CP-----TSAGGRACHNCGQVGHIRRDC-----PEEAQPPKCHNCGESGHL--RRDCPQE 103
Query: 539 LKQV-SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
L++ C++CGQSGHL +C + + S CY+CG GH+AR C
Sbjct: 104 LRESRKCHHCGQSGHLRRDCPD-----DSGPSEDKCYQCGDTGHWARNC 147
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ----GQDCFINKGSEHLASDC 479
C NCG+ H C + Q C CG H ++C Q + C S HL DC
Sbjct: 64 ACHNCGQVGHIRRDCPEEAQPPKCHNCGESGHLRRDCPQELRESRKCHHCGQSGHLRRDC 123
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEG 508
P D G S + C +CGD+GH +C G
Sbjct: 124 P-DDSG--PSEDKCYQCGDTGHWARNCPG 149
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 536 IIGLKQVSCYNCGQSGHL---GPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
G Q C+NCGQ GHL PE + G S C+ CGK GH R C ++
Sbjct: 3 TTGADQRKCHNCGQGGHLRRDCPEAPSQEGGFGGYNSGAACFGCGKTGHLKRDCPTSAGG 62
Query: 593 R 593
R
Sbjct: 63 R 63
>gi|2745744|gb|AAC97528.1| Gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C AL K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRALRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRALRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|5931492|dbj|BAA84669.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 1433
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 8/49 (16%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G K++ C+NCG+ GHL A +C AL K C+KCGKEGH + C
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRALRKKG----CWKCGKEGHQMKDC 424
>gi|358365333|dbj|GAA81955.1| zinc knuckle transcription factor [Aspergillus kawachii IFO 4308]
Length = 489
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 71/171 (41%), Gaps = 22/171 (12%)
Query: 425 CSNCGKENHTAATCKMQKQNKP-----CFLCGSFKHRWKNCKQG-QDCFI--NKGSE-HL 475
C+NCG HT CK +++ + C C + HR ++C + ++ F N GSE H
Sbjct: 273 CNNCGALGHTFRGCKEEREERERVGVKCVNCSADGHRARDCPEPRRNVFACRNCGSEDHK 332
Query: 476 ASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSS 535
AS+CP N+ C RC + GH C C C S H+
Sbjct: 333 ASECPNPRSAENVE---CKRCNEMGHFAKDC-----PQKPPPRTCRNCGSEDHVAKECDK 384
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ V+C NC + GH +C S + C CG+ GH +RC
Sbjct: 385 PRDVSTVTCRNCDEVGHFSRDCPKK-----RDYSRVKCNNCGEMGHTIKRC 430
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 59/155 (38%), Gaps = 22/155 (14%)
Query: 440 MQKQNKPCFLCGSFKHRWKNCKQ--------GQDCFINKGSEHLASDCPGTDQGNNLSSN 491
+Q C CG+ H ++ CK+ G C H A DCP + N+ +
Sbjct: 266 YDRQVPKCNNCGALGHTFRGCKEEREERERVGVKCVNCSADGHRARDCP--EPRRNVFA- 322
Query: 492 FCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSG 551
C CG H S C A++ ++C C GH +C NCG
Sbjct: 323 -CRNCGSEDHKASECPNPRSAEN---VECKRCNEMGHF--AKDCPQKPPPRTCRNCGSED 376
Query: 552 HLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ EC + S + C C + GHF+R C
Sbjct: 377 HVAKECDKPRDV-----STVTCRNCDEVGHFSRDC 406
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 421 NSETCSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQ---GQDCFINKGSE-H 474
N C NCG E+H A+ C + +N C C H K+C Q + C N GSE H
Sbjct: 319 NVFACRNCGSEDHKASECPNPRSAENVECKRCNEMGHFAKDCPQKPPPRTC-RNCGSEDH 377
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
+A +C D+ ++S+ C C + GH C + D +++C C GH
Sbjct: 378 VAKEC---DKPRDVSTVTCRNCDEVGHFSRDCPKKR---DYSRVKCNNCGEMGH 425
>gi|355729961|gb|AES10042.1| zinc finger, CCHC domain containing 7 [Mustela putorius furo]
Length = 545
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 52/140 (37%), Gaps = 22/140 (15%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDCPG 481
TC NC K H + C ++ +PC LC H C + C + S H + P
Sbjct: 241 TCRNCDKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPARFCLGCSLPMSSTHRCLERPS 300
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCEG---EYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
+ C RCG GH +C +YH G S++
Sbjct: 301 WRKR-------CDRCGMIGHYADACPEIWRQYHLTTKPGPPKKPKTPSG-----QSAL-- 346
Query: 539 LKQVSCYNCGQSGHLGPECA 558
V CYNCGQ GH G EC
Sbjct: 347 ---VYCYNCGQEGHYGHECT 363
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 52/151 (34%), Gaps = 30/151 (19%)
Query: 451 GSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEY 510
G + HR+ + + C HL+ +CP + C C + GH +C +
Sbjct: 227 GRWTHRYYSANKNVTCRNCDKCGHLSKNCPFPQKVRP-----CCLCSERGHLQYACPARF 281
Query: 511 HADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN----- 565
+ C + S H C S + C CG GH C +
Sbjct: 282 ------CLGCSLPMSSTHRCLERPSW----RKRCDRCGMIGHYADACPEIWRQYHLTTKP 331
Query: 566 ----------GKKSNLICYKCGKEGHFARRC 586
G+ + + CY CG+EGH+ C
Sbjct: 332 GPPKKPKTPSGQSALVYCYNCGQEGHYGHEC 362
>gi|18699193|gb|AAL78453.1|AF413987_8 gag polyprotein [Human immunodeficiency virus 1]
Length = 497
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 379 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKNCTERQANF 430
Query: 591 KDRLRIS 597
R+ S
Sbjct: 431 LGRIWPS 437
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ KNC + Q F+ +
Sbjct: 389 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKNCTERQANFLGR 433
>gi|378730825|gb|EHY57284.1| cellular nucleic acid-binding protein [Exophiala dermatitidis
NIH/UT8656]
Length = 231
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 69/190 (36%), Gaps = 38/190 (20%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASDC 479
C CG H A C + + C+ C H C + + C+ +G H+ +DC
Sbjct: 9 CYKCGNVGHYAEVCTSSE--RLCYNCKQPGHESNQCPLPRTTETKQCYHCQGLGHVQADC 66
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCE--------------------GEYHADDLKKIQ 519
P + C CG GH +C G Y + +
Sbjct: 67 PTLRISGGPAGGRCYSCGQIGHLARNCPTPSAAPAPRGGRGGYGSGFRGGYSVVNNRAAT 126
Query: 520 CYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---ICYKC 576
CY C H + + + CY CG+ GH+ + C A NG N CYKC
Sbjct: 127 CYKCGGPNHY----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNAAGKTCYKC 178
Query: 577 GKEGHFARRC 586
G+ GH ++ C
Sbjct: 179 GQPGHISKDC 188
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 61/171 (35%), Gaps = 43/171 (25%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQ--------GQDCFINKGSEH 474
C NC + H + C + + + K C+ C H +C G C+ H
Sbjct: 29 CYNCKQPGHESNQCPLPRTTETKQCYHCQGLGHVQADCPTLRISGGPAGGRCYSCGQIGH 88
Query: 475 LASDCPGTDQG---------------------NNLSSNFCLRCGDSGHDLSSCEGEYHAD 513
LA +CP NN ++ C +CG H C+ +
Sbjct: 89 LARNCPTPSAAPAPRGGRGGYGSGFRGGYSVVNNRAAT-CYKCGGPNHYARDCQAQ---- 143
Query: 514 DLKKIQCYICKSFGHL---CCV-NSSIIGLKQVSCYNCGQSGHLGPECANS 560
++CY C GH+ C N + +CY CGQ GH+ +C +
Sbjct: 144 ---AMKCYACGKLGHISRDCTAPNGGPLNAAGKTCYKCGQPGHISKDCTTA 191
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS-- 543
++L+ C +CG+ GH C + CY CK GH S+ L + +
Sbjct: 2 SSLTRRACYKCGNVGHYAEVCTSS-------ERLCYNCKQPGH----ESNQCPLPRTTET 50
Query: 544 --CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY+C GH+ +C ++G + CY CG+ GH AR C
Sbjct: 51 KQCYHCQGLGHVQADCPT--LRISGGPAGGRCYSCGQIGHLARNC 93
>gi|159125542|gb|EDP50659.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
fumigatus A1163]
Length = 509
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 64/167 (38%), Gaps = 45/167 (26%)
Query: 425 CSNCGKENHTAATCK-----MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
C NCG+ HTA CK + + C C + HR ++C + + +++ EH A+DC
Sbjct: 287 CGNCGEMGHTARGCKEERALVDRVEVKCVNCNASGHRARDCTEPR---VDRSPEHKAADC 343
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
P + C RC + GH C H +
Sbjct: 344 PNPRSAEGVE---CKRCNEMGHFAKDC----HQAPAPR---------------------- 374
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+C NCG H+ +C +A S + C C + GHF+R C
Sbjct: 375 ---TCRNCGSEDHMARDCDKPRDA-----SIVTCRNCEEVGHFSRDC 413
>gi|442762043|gb|JAA73180.1| Putative e3 ubiquitin ligase, partial [Ixodes ricinus]
Length = 179
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 18/94 (19%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +C GH C+ A+D +CY C GH+ G ++SCYNCG+ GH
Sbjct: 95 CYKCNRIGHFARDCK---EAED----RCYRCNGTGHI--SKDCQHGPDEMSCYNCGKMGH 145
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ EC K+ CY C K+GH +R C
Sbjct: 146 IAREC---------KEQEKTCYICHKQGHISRDC 170
>gi|56266772|gb|AAV85016.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+I G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 381 SNIRGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKNCTERQANF 432
Query: 591 KDRLRISD 598
++ S
Sbjct: 433 LGKIWPSS 440
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ KNC + Q F+ K
Sbjct: 391 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKNCTERQANFLGK 435
>gi|354545207|emb|CCE41934.1| hypothetical protein CPAR2_804830 [Candida parapsilosis]
Length = 388
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 60/168 (35%), Gaps = 57/168 (33%)
Query: 413 RYF---DPPGWNSET----CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD 465
RYF DP N ++ C NC + H A CK+ C CG
Sbjct: 73 RYFGATDPDSENQQSSGPICDNCHERGHKRAQCKVVI----CHKCG-------------- 114
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
K +H S CP T CLRCG+ GH +S C+ + KK C C +
Sbjct: 115 ----KVGDHYESQCPSTL--------VCLRCGEKGHYISQCKSKVR----KKQYCRNCDT 158
Query: 526 FGHLCCVNSSI----------------IGLKQVSCYNCGQSGHLGPEC 557
F H SI + L + CYNC H G EC
Sbjct: 159 FQHGDEDCPSIWRSYLTKRNHDEEKESLVLPNIYCYNCASDEHFGDEC 206
>gi|395824290|ref|XP_003785403.1| PREDICTED: zinc finger CCHC domain-containing protein 7 [Otolemur
garnettii]
Length = 542
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 56/162 (34%), Gaps = 14/162 (8%)
Query: 413 RYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGS 472
RY+ + + C NC K H + C + ++ +PCFLC H +C C
Sbjct: 233 RYYS--DYKNVICRNCDKRGHLSKNCPLPQKVRPCFLCSERGHLLYSCPAAH-CVNCPLP 289
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCV 532
+ L C S C RC GH +C + Q ++ G
Sbjct: 290 KKLGHRCLFRYSW----SKQCDRCHMQGHYTDACPEIWR-------QYHLTTKPGPPIKP 338
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICY 574
+ V CY C Q GH G EC E S I Y
Sbjct: 339 KTPSRPSALVYCYLCAQKGHYGHECTEKNEYEEYVVSPFISY 380
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 43/128 (33%), Gaps = 30/128 (23%)
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVN 533
HL+ +CP + C C + GH L SC + + C + K GH C
Sbjct: 251 HLSKNCPLPQKVRP-----CFLCSERGHLLYSCPAAH------CVNCPLPKKLGHRCLFR 299
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALN--------------GKKSNLI-CYKCGK 578
S C C GH C + + S L+ CY C +
Sbjct: 300 YSW----SKQCDRCHMQGHYTDACPEIWRQYHLTTKPGPPIKPKTPSRPSALVYCYLCAQ 355
Query: 579 EGHFARRC 586
+GH+ C
Sbjct: 356 KGHYGHEC 363
>gi|225431120|ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vitis vinifera]
Length = 241
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 39/115 (33%), Gaps = 21/115 (18%)
Query: 493 CLRCGDSGHDLSSC-------EGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVS 543
C CG +GH C G CY C GHL C S G
Sbjct: 121 CYNCGGTGHLARDCVRRNNGGGGGGSGGGGGGGGCYTCGQPGHLARDCSRPSGGGGGGGG 180
Query: 544 CYNCGQSGHLGPECA------------NSCEALNGKKSNLICYKCGKEGHFARRC 586
CYNCG GHL +C CY CG+EGHFAR C
Sbjct: 181 CYNCGDYGHLARDCTLESGSAGRFGGGGGGGGGRFGGGGGGCYNCGQEGHFAREC 235
>gi|326500674|dbj|BAJ95003.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 75/200 (37%), Gaps = 37/200 (18%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
R+P + ++ TC+NC H AA C + C+ C H CK C
Sbjct: 113 CRRPGHIARDCPSASTCNNCNLPGHFAAECTSKTV---CWNCKKSGHIATECKNEALCHT 169
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKK----------- 517
+ H+A DCP + L +N C GH C + ++ ++
Sbjct: 170 CSKTGHMARDCPASGSNAKLCNN----CFKPGHIAVDCTNDRACNNCRQPGHIARECKND 225
Query: 518 IQCYICKSFGHLC--CVNSSIIG-------LKQVSCYNCGQSGHLGPECANSCEALNGKK 568
C +C GHL C ++ + + +SC CGQ GH+ C +
Sbjct: 226 PVCNLCNVSGHLARSCPKTTTLASEIHGGPFRDISCRICGQPGHISRNCMVT-------- 277
Query: 569 SNLICYKCGKEGHFARRCGS 588
+IC CG GH + C S
Sbjct: 278 --VICDTCGGRGHMSYECPS 295
>gi|254667179|gb|ACT76542.1| gag protein [Human immunodeficiency virus 1]
Length = 452
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 338 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 389
Query: 595 RIS 597
S
Sbjct: 390 WPS 392
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 344 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 388
>gi|14571896|gb|AAK67313.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 21/106 (19%)
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII-------GLKQVSCYNCGQSGHLGP 555
+++C+G ++ + ++ H+ N++I+ G K++ C+NCG+ GHL
Sbjct: 343 MTACQGVGGPSHKARV---LAEAMSHVQNTNANIMMQRGNFRGQKRIKCFNCGKEGHL-- 397
Query: 556 ECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRISD 598
A +C A K C+KCGKEGH + C +NF ++ S+
Sbjct: 398 --ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWPSN 437
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 388 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 432
>gi|341942259|sp|P12497.4|POL_HV1N5 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1435
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 13/74 (17%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCGKEGH + C + LR DL
Sbjct: 388 KTVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLR-EDL 438
Query: 600 LFTAERPPTRARHF 613
F P +AR F
Sbjct: 439 AF----PQGKAREF 448
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+
Sbjct: 392 CFNCGKEGHIAKNCRAPRK-KGCWKCGKEGHQMKDCTERQANFL 434
>gi|254667134|gb|ACT76512.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RISD 598
S
Sbjct: 436 WPSS 439
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|374429781|gb|AEZ51114.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 490
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 21/105 (20%)
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII-------GLKQVSCYNCGQSGHLGP 555
+++C+G ++ + ++ H+ N++I+ G K++ C+NCG+ GHL
Sbjct: 340 MTACQGVAGPSHKARV---LAEAMSHVQQANTNIMMQRGNFKGQKRIKCFNCGKEGHL-- 394
Query: 556 ECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRIS 597
A +C A K C+KCGKEGH + C +NF ++ S
Sbjct: 395 --ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWPS 433
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 385 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 429
>gi|198401785|gb|ACH87542.1| Air1 domain containing protein [Platynereis dumerilii]
Length = 489
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CG +GH C + + I C+ C+ GH SS + + C+ C GH
Sbjct: 346 CFECGGAGHLAPHCPTRHQ----RSIHCFECEGVGHPAPQCSSRRHVSII-CHQCRGRGH 400
Query: 553 LGPECANSC---EALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
+ CA SC + +++ Y+C GH AR C + +R S+
Sbjct: 401 IAKNCAFSCGPASHFSPRRNITRGYECWNYGHIARNCIDSTSSIVRASNY 450
>gi|254667161|gb|ACT76530.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQXKDCTERQANFLGRL 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
>gi|189195318|ref|XP_001933997.1| cellular nucleic acid binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979876|gb|EDU46502.1| cellular nucleic acid binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 189
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 69/190 (36%), Gaps = 42/190 (22%)
Query: 413 RYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGS 472
R + P + TC NCG++ H + C + K C+ CG H + C +
Sbjct: 24 RAAECPTKGTPTCYNCGEKGHVSRECTSPQAEKTCYRCGGTGHISRECTK---------- 73
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE--GEY--------------HADDLK 516
D G S C +CG GH +C G Y +
Sbjct: 74 -----DGGAPMGGRGGGSQECYKCGQVGHIARNCSQGGGYSAGSRGGYGGGAAGGYGGAR 128
Query: 517 KIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
+ CY C FGH+ G K CYNCG+ GHL +C S +CY+C
Sbjct: 129 QTTCYSCGGFGHM--SRDCTQGQK---CYNCGEVGHLSRDCPQE------TSSERVCYRC 177
Query: 577 GKEGHFARRC 586
+ GH C
Sbjct: 178 KQPGHVQSAC 187
>gi|407734560|gb|AFU28129.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K+V C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 389 GQKRVKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRI 440
Query: 595 RISD 598
S+
Sbjct: 441 WPSN 444
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 395 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 439
>gi|345564451|gb|EGX47414.1| hypothetical protein AOL_s00083g507 [Arthrobotrys oligospora ATCC
24927]
Length = 196
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 35/184 (19%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQG---QDCFINKGSEHLASDCP 480
+C NCG H A C ++ N C+ CG H + C+ + C+ + H++ +C
Sbjct: 20 SCYNCGGSGHQAKDCP-KRGNPVCYNCGQDGHLSRECQSPPKEKSCYRCGQTGHISRECT 78
Query: 481 GTDQGNNLSSNF----------CLRCGDSGHDLSSCEGEYHADDLKKIQ--------CYI 522
G++ S C +CG GH +C+ + + CY
Sbjct: 79 NESSGSSYSGGNSGGAAGSGAECYKCGKVGHIARNCQSGDNGGFGGGNRYASGRGQTCYS 138
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
C FGH+ G K CYNCGQ GHL +C + + + +CYKC K GH
Sbjct: 139 CGGFGHM--SRDCTQGQK---CYNCGQIGHLSRDCTS--------EQDRVCYKCKKPGHI 185
Query: 583 ARRC 586
C
Sbjct: 186 MSNC 189
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 42/104 (40%), Gaps = 16/104 (15%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CG SGH C CY C GHL K+ SCY CGQ+GH
Sbjct: 21 CYNCGGSGHQAKDCP------KRGNPVCYNCGQDGHL--SRECQSPPKEKSCYRCGQTGH 72
Query: 553 LGPECANSCEALNGKKSNLI--------CYKCGKEGHFARRCGS 588
+ EC N + N CYKCGK GH AR C S
Sbjct: 73 ISRECTNESSGSSYSGGNSGGAAGSGAECYKCGKVGHIARNCQS 116
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
SCYNCG SGH +C K+ N +CY CG++GH +R C S K++
Sbjct: 20 SCYNCGGSGHQAKDCP--------KRGNPVCYNCGQDGHLSRECQSPPKEK 62
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 39/174 (22%)
Query: 444 NKPCFLCGSFKHRWKNC-KQGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGH 501
N+ C+ CG H+ K+C K+G N G + HL+ +C + C RCG +GH
Sbjct: 18 NRSCYNCGGSGHQAKDCPKRGNPVCYNCGQDGHLSRECQSPPK-----EKSCYRCGQTGH 72
Query: 502 DLSSCEGEYHADDLKKI----------QCYICKSFGHLC--CVNSS---------IIGLK 540
C E +CY C GH+ C + +
Sbjct: 73 ISRECTNESSGSSYSGGNSGGAAGSGAECYKCGKVGHIARNCQSGDNGGFGGGNRYASGR 132
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRL 594
+CY+CG GH+ +C G+K CY CG+ GH +R C S +DR+
Sbjct: 133 GQTCYSCGGFGHMSRDCTQ------GQK----CYNCGQIGHLSRDCTSE-QDRV 175
>gi|254667101|gb|ACT76490.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|209980285|gb|ACJ04836.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|409684246|gb|AFV34170.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ CYNCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GPKRIKCYNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CYNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|195954533|gb|ACG58959.1| gag protein [Human immunodeficiency virus 1]
Length = 338
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 220 SNFRGTKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 271
Query: 591 KDRLRIS 597
R+ S
Sbjct: 272 LGRIWPS 278
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 230 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 274
>gi|449664234|ref|XP_002161873.2| PREDICTED: probable ATP-dependent RNA helicase DDX4 [Hydra
magnipapillata]
Length = 815
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 53/166 (31%), Gaps = 57/166 (34%)
Query: 424 TCSNCGKENHTAATCK---MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP 480
C CGKE H + C + CF C K H++ DCP
Sbjct: 71 ACHKCGKEGHMSRECPDGGGGGGGRACFKC-------------------KQEGHMSRDCP 111
Query: 481 GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLK 540
QG + C +CG GH C G
Sbjct: 112 ---QGGSGGGRACHKCGKEGHMSRECPDG----------------------------GGG 140
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+C+ C Q GH+ +C + C+KCGKEGH +R C
Sbjct: 141 GRACFKCKQEGHMSKDCPQGGGGGGSR----TCHKCGKEGHMSREC 182
>gi|31980416|dbj|BAC77737.1| Gag polyprotein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A C AL K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----AKHCRALRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLAKHCRALRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|406855971|gb|AFS63978.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|67467476|ref|XP_649839.1| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|56466350|gb|EAL44453.1| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449701896|gb|EMD42631.1| zinc finger protein, putative [Entamoeba histolytica KU27]
Length = 389
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 425 CSNCGKENHTAATCKMQKQNKP---CFLCGSFKHRWKNCKQGQ-DCFINKGSEHLASDCP 480
C CGK HT+ C Q +NK CF+CG H K+C + CF+ + H + DCP
Sbjct: 269 CIICGKIGHTSKDCP-QNENKGSDCCFICGETGHISKDCPNAERKCFVCGKTGHKSRDCP 327
Query: 481 GTDQGNNLSSNFCLRCGDSGH 501
+GNN C CG+ GH
Sbjct: 328 KA-KGNNRP---CFICGEIGH 344
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 493 CLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQ 549
C+ CG GH C + E D C+IC GH+ C N+ + C+ CG+
Sbjct: 269 CIICGKIGHTSKDCPQNENKGSDC----CFICGETGHISKDCPNA------ERKCFVCGK 318
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+GH +C + K +N C+ CG+ GH R C
Sbjct: 319 TGHKSRDCPKA------KGNNRPCFICGEIGHLDRDC 349
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 40/116 (34%)
Query: 447 CFLCGSFKHRWKNCKQGQD-----CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
C +CG H K+C Q ++ CFI + H++ DCP ++ C CG +GH
Sbjct: 269 CIICGKIGHTSKDCPQNENKGSDCCFICGETGHISKDCPNAERK-------CFVCGKTGH 321
Query: 502 DLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
C K+ G+ C+ CG+ GHL +C
Sbjct: 322 KSRDCP----------------KAKGN------------NRPCFICGEIGHLDRDC 349
>gi|148469886|gb|ABQ65876.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 378 SNFRGTKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 429
Query: 591 KDRLRIS 597
R+ S
Sbjct: 430 LGRIWPS 436
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 388 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 432
>gi|49887119|gb|AAT68802.1| gag protein [Simian immunodeficiency virus]
Length = 532
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 13/73 (17%)
Query: 542 VSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLF 601
+ C+NCGQ GH+ +C K + C+KCGKEGH A+ CG ++ ++ L
Sbjct: 418 LRCFNCGQIGHVQRDCK--------KPRKVKCFKCGKEGHIAKNCG-----QVPRANFLG 464
Query: 602 TAERPPTRARHFV 614
A R R+F+
Sbjct: 465 NAPWASRRPRNFL 477
>gi|259128799|gb|ACV95097.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGEEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|409070402|gb|EKM73407.1| hypothetical protein AGABI1DRAFT_134830 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 176
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + G+K N C+ CGK GH A+ C SN R+R
Sbjct: 103 CHKCGKFGHIGKNCEEKKKNF-GEKKNFKCFSCGKFGHIAKDCRSNRSGRIR 153
>gi|407740984|gb|AFU33495.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKKIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGRI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGR 434
>gi|358395603|gb|EHK44990.1| hypothetical protein TRIATDRAFT_166172, partial [Trichoderma
atroviride IMI 206040]
Length = 404
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 43/170 (25%)
Query: 425 CSNCGKENHTAATCKMQK----QNKP---CFLCGSFKHRWKNCKQGQDCFINKGSEHLAS 477
C NC + +HT+ C ++ KP C+ CG+ HR ++C +
Sbjct: 237 CYNCSELSHTSKACTQERVEHASEKPKISCYNCGNEGHRVRDCPE--------------- 281
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
P D+ C CG SGH ++ C ++ ++C C GH
Sbjct: 282 --PRVDKF------ACKNCGKSGHKIAECP---EPPNMDNVECRKCNKTGHF--AKDCPD 328
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI-CYKCGKEGHFARRC 586
G + +C NCGQ GH+ +C + +L+ C C + GH+++ C
Sbjct: 329 GGSR-ACRNCGQEGHISKDCDQP------RNMDLVTCRNCEETGHYSKEC 371
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 45/109 (41%), Gaps = 10/109 (9%)
Query: 424 TCSNCGKENHTAATCKMQKQ--NKPCFLCGSFKHRWKNCKQGQD-CFINKGSE-HLASDC 479
C NCGK H A C N C C H K+C G N G E H++ DC
Sbjct: 288 ACKNCGKSGHKIAECPEPPNMDNVECRKCNKTGHFAKDCPDGGSRACRNCGQEGHISKDC 347
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH 528
DQ N+ C C ++GH C D K+QC C+ +GH
Sbjct: 348 ---DQPRNMDLVTCRNCEETGHYSKECP---KPRDWSKVQCTNCEEYGH 390
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 53/140 (37%), Gaps = 15/140 (10%)
Query: 424 TCSNCGKENHTAATCKMQKQNK-PCFLCGSFKHRWKNCKQGQ-----DCFINKGSEHLAS 477
+C NCG E H C + +K C CG H+ C + +C + H A
Sbjct: 265 SCYNCGNEGHRVRDCPEPRVDKFACKNCGKSGHKIAECPEPPNMDNVECRKCNKTGHFAK 324
Query: 478 DCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSII 537
DCP D G S C CG GH C+ ++ + C C+ GH
Sbjct: 325 DCP--DGG----SRACRNCGQEGHISKDCD---QPRNMDLVTCRNCEETGHYSKECPKPR 375
Query: 538 GLKQVSCYNCGQSGHLGPEC 557
+V C NC + GH C
Sbjct: 376 DWSKVQCTNCEEYGHTKVRC 395
>gi|158295392|ref|XP_316189.4| AGAP006128-PA [Anopheles gambiae str. PEST]
gi|157016015|gb|EAA11249.5| AGAP006128-PA [Anopheles gambiae str. PEST]
Length = 1762
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 52/140 (37%), Gaps = 21/140 (15%)
Query: 463 GQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
G DC N + + D+ NL S DS H + Y K+I C
Sbjct: 816 GPDCAWNDEMKQFYNTS-WADEDLNLKSILRQMPRDSRHWYLLLKDRYPDPPRKEIICSN 874
Query: 523 CKSFGHL--CCVNSSIIGLKQVSCYNCGQSGHLGPECANS-CEALNGKKSNL-------- 571
C GH+ C N+ K V+CY CG+ GH P C + C K N
Sbjct: 875 CGERGHVRFKCRNAP----KLVTCYMCGEQGHREPRCPKTVCLNCGAKTRNFVRGCKTCA 930
Query: 572 -----ICYKCGKEGHFARRC 586
IC+ CG GH R C
Sbjct: 931 RDADTICFSCGVRGHTQRSC 950
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 51/132 (38%), Gaps = 10/132 (7%)
Query: 407 MLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDC 466
LL K RY DPP CSNCG+ H C+ + C++CG HR C +
Sbjct: 855 YLLLKDRYPDPPR-KEIICSNCGERGHVRFKCRNAPKLVTCYMCGEQGHREPRCPKTVCL 913
Query: 467 FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEG---EYHA---DDLKKIQC 520
+ + C + + C CG GH SC YH+ D++ +
Sbjct: 914 NCGAKTRNFVRGCKTCARD---ADTICFSCGVRGHTQRSCPDLWRRYHSTIEDNVPLKED 970
Query: 521 YICKSFGHLCCV 532
++ CCV
Sbjct: 971 FVKNPKARWCCV 982
>gi|407739522|gb|AFU32291.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGRI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLAKNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGR 434
>gi|374429901|gb|AEZ51204.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 383 NGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQAN 434
Query: 590 FKDRLRISD 598
F R S+
Sbjct: 435 FLGRFWPSN 443
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 394 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 438
>gi|409074125|gb|EKM74540.1| hypothetical protein AGABI1DRAFT_133138 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 369
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + G+K + C+ CGK GH A+ C SN R+R
Sbjct: 296 CHKCGKFGHIGKNCEEKRKNF-GEKKSFKCFSCGKFGHIAKDCRSNRSGRIR 346
>gi|407738260|gb|AFU31234.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|326417078|gb|ADZ73382.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G++ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 373 GNIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 424
Query: 587 G---SNFKDRLRISD 598
+NF R+ S+
Sbjct: 425 TERQANFLGRMWPSN 439
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|15054664|gb|AAK82677.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A SC A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGEEGHL----ARSCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCG+E H A +C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGEEGHLARSCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|349605188|gb|AEQ00508.1| Zinc finger CCHC domain-containing protein 7-like protein, partial
[Equus caballus]
Length = 344
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 53/140 (37%), Gaps = 22/140 (15%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC--KQGQDCFINKGSEHLASDCPG 481
TC NC + H + C ++ +PC LC H C + DC + S H + P
Sbjct: 39 TCRNCDRCGHLSKNCPFPQKVRPCCLCSERGHLQYACPARFCLDCSLPMSSTHRCLERPS 98
Query: 482 TDQGNNLSSNFCLRCGDSGHDLSSCE---GEYHADDLKKIQCYICKSFGHLCCVNSSIIG 538
+ C RC GH +C +YH G S++
Sbjct: 99 WRKR-------CDRCDMIGHHADACPEIWRQYHLTTKPGPPKKPKTPSG-----QSAL-- 144
Query: 539 LKQVSCYNCGQSGHLGPECA 558
V CYNCGQ GH G ECA
Sbjct: 145 ---VYCYNCGQEGHYGHECA 161
>gi|259128729|gb|ACV95071.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 424
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 311 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 362
Query: 595 RIS 597
S
Sbjct: 363 WPS 365
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 317 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 361
>gi|299115494|emb|CBN75658.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 351
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHAD-DLKKIQCYICK 524
C + H+ ++CP ++ C CG + H L C D L C+ICK
Sbjct: 99 CLGCRAWGHIVANCPEA----KAATGICFNCGSAKHALRVCPAPKQKDGSLPYATCFICK 154
Query: 525 SFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
+ GH+ C N++ + K C CG HL +C S
Sbjct: 155 AKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSWDCPES 193
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 11/97 (11%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQNKP-CFLCGSFKHRWKNCKQGQD---------CF 467
PG N C C H A C K CF CGS KH + C + CF
Sbjct: 92 PGANKTRCLGCRAWGHIVANCPEAKAATGICFNCGSAKHALRVCPAPKQKDGSLPYATCF 151
Query: 468 INKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLS 504
I K H+++ C G FC CG S H LS
Sbjct: 152 ICKAKGHISAHCKQNANGVYPKGGFCKWCG-SKHHLS 187
>gi|409684483|gb|AFV34383.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 536 IIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKD 592
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 382 FTGHKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQLKDCTERQANFLG 433
Query: 593 RLRISD 598
RL S
Sbjct: 434 RLWPSS 439
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQLKDCTERQANFLGR 434
>gi|407739537|gb|AFU32303.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGRI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLAKNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGR 434
>gi|407739532|gb|AFU32299.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGRI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGR 434
>gi|407739517|gb|AFU32287.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGRI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGR 434
>gi|407739507|gb|AFU32279.1| gag protein [Human immunodeficiency virus 1]
gi|407739527|gb|AFU32295.1| gag protein [Human immunodeficiency virus 1]
gi|407739542|gb|AFU32307.1| gag protein [Human immunodeficiency virus 1]
gi|407739547|gb|AFU32311.1| gag protein [Human immunodeficiency virus 1]
gi|407739552|gb|AFU32315.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGRI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGR 434
>gi|299929997|gb|ADJ58206.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 385 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 436
Query: 595 RISD 598
S+
Sbjct: 437 WPSN 440
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 391 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 435
>gi|407738250|gb|AFU31226.1| gag protein [Human immunodeficiency virus 1]
gi|407738255|gb|AFU31230.1| gag protein [Human immunodeficiency virus 1]
gi|407738265|gb|AFU31238.1| gag protein [Human immunodeficiency virus 1]
gi|407738270|gb|AFU31242.1| gag protein [Human immunodeficiency virus 1]
gi|407738280|gb|AFU31250.1| gag protein [Human immunodeficiency virus 1]
gi|407738285|gb|AFU31254.1| gag protein [Human immunodeficiency virus 1]
gi|407738290|gb|AFU31258.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|259124630|gb|ACV93451.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K+V C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRVKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|57869542|gb|AAW57595.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 383 GQKKIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 434
Query: 595 RIS 597
S
Sbjct: 435 WPS 437
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 389 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 433
>gi|554970|gb|AAA44694.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 487
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
>gi|407740989|gb|AFU33499.1| gag protein [Human immunodeficiency virus 1]
gi|407740994|gb|AFU33503.1| gag protein [Human immunodeficiency virus 1]
gi|407740999|gb|AFU33507.1| gag protein [Human immunodeficiency virus 1]
gi|407741004|gb|AFU33511.1| gag protein [Human immunodeficiency virus 1]
gi|407741009|gb|AFU33515.1| gag protein [Human immunodeficiency virus 1]
gi|407741019|gb|AFU33523.1| gag protein [Human immunodeficiency virus 1]
gi|407741024|gb|AFU33527.1| gag protein [Human immunodeficiency virus 1]
gi|407741029|gb|AFU33531.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGRI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGR 434
>gi|407738295|gb|AFU31262.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|346322682|gb|EGX92280.1| zinc finger CCHC domain-containing protein [Cordyceps militaris
CM01]
Length = 202
Score = 47.4 bits (111), Expect = 0.025, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
SCY CGQ GHL EC + G + CYKCG GH AR C
Sbjct: 32 SCYKCGQPGHLSRECPTA----GGNGQSTECYKCGDMGHIARHC 71
>gi|308152396|emb|CBX25650.1| gag-pol polyprotein, intergenic region [Small ruminant lentivirus]
Length = 214
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 10/49 (20%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G K+ +CYNCG+ GHL +C +S CYKCGK GH + C
Sbjct: 171 GAKEQTCYNCGKPGHLARQC----------RSGKTCYKCGKRGHVQKDC 209
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 374 QKKRRKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENH 433
QK KK + ++K++ R+ + Y +++L + R G +TC NCGK H
Sbjct: 128 QKVLGKKAQASTVEEKLQACREVESSTYK--MQLLAQALRPTGERGAKEQTCYNCGKPGH 185
Query: 434 TAATCKMQKQNKPCFLCGSFKHRWKNCKQG 463
A C + K C+ CG H K+C+QG
Sbjct: 186 LARQC---RSGKTCYKCGKRGHVQKDCRQG 212
>gi|407738275|gb|AFU31246.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|37220736|gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]
Length = 244
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 25/200 (12%)
Query: 392 DARKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCG 451
D R+ + +V+ + ++P +F + C+NCG H AA C + C+ C
Sbjct: 32 DPREHRGFRQDVICKNC-KRPGHFARDCSHIAVCNNCGLPGHIAAECTAKTL---CWNCK 87
Query: 452 SFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYH 511
H C C + HLA DC + ++ + C C GH + C +
Sbjct: 88 EPGHMANECSNEAVCHNCNKTGHLARDCSASGL-SSFDTRLCNNCHRPGHIAADCTNDK- 145
Query: 512 ADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANS---CEALNG 566
C C+ GHL C N + C C SGH+ +C S E G
Sbjct: 146 -------TCNNCRKPGHLARECTNDPV-------CNVCNVSGHVARQCPKSNLPSEIHGG 191
Query: 567 KKSNLICYKCGKEGHFARRC 586
++IC C + GH +R C
Sbjct: 192 PFRDIICRVCNQPGHISRDC 211
>gi|55416407|gb|AAV50167.1| gag protein [Human immunodeficiency virus 1]
Length = 485
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 377 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGRI 428
Query: 595 RISD 598
S
Sbjct: 429 WPSS 432
>gi|260408201|gb|ACX37415.1| vasa [Botryllus schlosseri]
Length = 655
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 10/96 (10%)
Query: 415 FDPPGWNSETCSNCGKENHTAATCK---MQKQNKPCFLCGSFKHRWKNCKQG------QD 465
F G NS C CG+E H + C + K CF CG H + C G +
Sbjct: 43 FGKSGSNSRACFKCGQEGHMSRECPEGGGGSRPKGCFKCGEEGHMSRECPSGGGDSRPKG 102
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
CF H++ +CP T G + C +CG+ GH
Sbjct: 103 CFKCGEEGHMSRECP-TGGGGDSRPKGCFKCGEEGH 137
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 490 SNFCLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLCCVNSSIIG-LKQVSCYNC 547
S C +CG GH C EG + C+ C GH+ S G + C+ C
Sbjct: 50 SRACFKCGQEGHMSRECPEG---GGGSRPKGCFKCGEEGHMSRECPSGGGDSRPKGCFKC 106
Query: 548 GQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G+ GH+ EC G C+KCG+EGH +R C
Sbjct: 107 GEEGHMSRECPT---GGGGDSRPKGCFKCGEEGHMSREC 142
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
+C+ CGQ GH+ EC G C+KCG+EGH +R C S D
Sbjct: 52 ACFKCGQEGHMSRECPEG----GGGSRPKGCFKCGEEGHMSRECPSGGGD 97
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF H++ +CP + G C +CG+ GH C D + C+ C
Sbjct: 53 CFKCGQEGHMSRECP--EGGGGSRPKGCFKCGEEGHMSRECPS--GGGDSRPKGCFKCGE 108
Query: 526 FGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECAN 559
GH+ C + C+ CG+ GH+ EC N
Sbjct: 109 EGHMSRECPTGGGGDSRPKGCFKCGEEGHMSRECPN 144
>gi|259128793|gb|ACV95094.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 434
>gi|195954541|gb|ACG58963.1| gag protein [Human immunodeficiency virus 1]
gi|238734313|gb|ACR55532.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFRGPKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRIS 597
R+ S
Sbjct: 432 LGRIWPS 438
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLAKNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|259129141|gb|ACV95238.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCAERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCAERQANFLGR 434
>gi|259128816|gb|ACV95105.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 434
>gi|158297099|ref|XP_317381.3| AGAP008075-PA [Anopheles gambiae str. PEST]
gi|157015032|gb|EAA12317.4| AGAP008075-PA [Anopheles gambiae str. PEST]
Length = 153
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +C GH C+ +DL + CY C GH+ + CYNC QSGH
Sbjct: 46 CYKCNQMGHFARDCK-----EDLDR--CYRCNGSGHI--ARDCSLSPDDSCCYNCNQSGH 96
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
L A +C + + N+ CY C K GH +R C S
Sbjct: 97 L----ARNCPEKSDRDMNVSCYNCNKSGHISRNCPS 128
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 57/144 (39%), Gaps = 41/144 (28%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ C H ++CK+ D C+ GS H+A DC + + C C SGH +
Sbjct: 46 CYKCNQMGHFARDCKEDLDRCYRCNGSGHIARDCSLSPD-----DSCCYNCNQSGHLARN 100
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C + D VSCYNC +SGH+ C +
Sbjct: 101 CPEKSDRD--------------------------MNVSCYNCNKSGHISRNCPS------ 128
Query: 566 GKKSNLICYKCGKEGHFARRCGSN 589
G KS CY CGK GH +R C N
Sbjct: 129 GDKS---CYSCGKIGHLSRDCTEN 149
>gi|326417102|gb|ADZ73393.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ CYNCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 381 GQKRIKCYNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 432
Query: 595 RISD 598
S+
Sbjct: 433 WPSN 436
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 387 CYNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 431
>gi|259129051|gb|ACV95199.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQTKDCTERQANFLGRI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|401841429|gb|EJT43819.1| AIR2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 344
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 30/128 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C C H K+C + +H + CP + C +C + GH S C
Sbjct: 63 CNNCSQRGHLKKDCPHIICSYCGSTDDHYSQHCPKAIK--------CSKCDEVGHYRSQC 114
Query: 507 EGEYHADDLKKIQCYICKSFGHL---C--------------CVNSSIIGLKQVSCYNCGQ 549
++ KK+QC +CKS H C V ++ + CYNCG+
Sbjct: 115 PHKW-----KKVQCSLCKSKKHSKERCPSIWRAYILIDDDQMVKPKVLPFHTIYCYNCGE 169
Query: 550 SGHLGPEC 557
GH G +C
Sbjct: 170 KGHFGDDC 177
>gi|259128826|gb|ACV95109.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 434
>gi|259128797|gb|ACV95096.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 434
>gi|259128778|gb|ACV95087.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 434
>gi|224074255|ref|XP_002304323.1| predicted protein [Populus trichocarpa]
gi|222841755|gb|EEE79302.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQS 550
C +CG SGH C CY C GH+ C S +CYNCG
Sbjct: 135 CYKCGSSGHFARECT------KGNNNGCYSCGGIGHVARDCPGGS------GACYNCGGY 182
Query: 551 GHLGPECAN---SCEALNGKKSNLICYKCGKEGHFARRC 586
GHL +C + + G ++ C+ CG EGHFAR C
Sbjct: 183 GHLARDCTSARVTGGGRFGGGNSGGCFNCGNEGHFARDC 221
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 24/99 (24%)
Query: 425 CSNCGKENHTAATC---------------KMQKQNKPCFLCGSFKHRWKNCKQGQD--CF 467
C NCG H A C + + C+ CGS H + C +G + C+
Sbjct: 98 CFNCGNPGHIARDCNNNSSKSYNNYNNNNNNRGADFGCYKCGSSGHFARECTKGNNNGCY 157
Query: 468 INKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
G H+A DCPG S C CG GH C
Sbjct: 158 SCGGIGHVARDCPG-------GSGACYNCGGYGHLARDC 189
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Query: 542 VSCYNCGQSGHLGPECANSCEALNG--------KKSNLICYKCGKEGHFARRC 586
V C+NCG GH+ +C N+ + ++ CYKCG GHFAR C
Sbjct: 96 VGCFNCGNPGHIARDCNNNSSKSYNNYNNNNNNRGADFGCYKCGSSGHFAREC 148
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGT- 482
C CG H A C + N C+ CG H ++C G C+ G HLA DC
Sbjct: 135 CYKCGSSGHFAREC-TKGNNNGCYSCGGIGHVARDCPGGSGACYNCGGYGHLARDCTSAR 193
Query: 483 ----DQGNNLSSNFCLRCGDSGHDLSSC 506
+ +S C CG+ GH C
Sbjct: 194 VTGGGRFGGGNSGGCFNCGNEGHFARDC 221
>gi|116201047|ref|XP_001226335.1| hypothetical protein CHGG_08408 [Chaetomium globosum CBS 148.51]
gi|88176926|gb|EAQ84394.1| hypothetical protein CHGG_08408 [Chaetomium globosum CBS 148.51]
Length = 222
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 62/170 (36%), Gaps = 42/170 (24%)
Query: 425 CSNCGKENHTAATCKMQKQNKP--CFLCGSFKHRWKNCK--------QGQDCFINKGSEH 474
C NC + NH + C M + K C+ C H C G C+ H
Sbjct: 29 CYNCKQPNHESNECPMPRTTKAKQCYHCQGLGHVQAECPTLRLSGAGAGNRCYNCDSIGH 88
Query: 475 LASDCP-----GTDQGNNLS----------------SNFCLRCGDSGHDLSSCEGEYHAD 513
LA +CP G +G + C +CG H C+ +
Sbjct: 89 LARNCPNPPVPGAGRGGMVPRGGFAPVRGGFVGGPRPATCYKCGGPNHFARDCQAQ---- 144
Query: 514 DLKKIQCYICKSFGHL---CCV-NSSIIGLKQVSCYNCGQSGHLGPECAN 559
++CY C GH+ C N + +CY CG++GH+ +CAN
Sbjct: 145 ---AMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAGHISRDCAN 191
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 50/143 (34%), Gaps = 45/143 (31%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEY----------HADD-------LKKIQCYICKSFGH 528
+++S C +CG+ GH +C + H + K QCY C+ GH
Sbjct: 2 SSVSRRACYKCGELGHHAEACASPHRLCYNCKQPNHESNECPMPRTTKAKQCYHCQGLGH 61
Query: 529 LCCVNSSIIGLKQVS------CYNCGQSGHLGPECANSCEALNGKKSNL----------- 571
V + L+ CYNC GHL C N G+ +
Sbjct: 62 ---VQAECPTLRLSGAGAGNRCYNCDSIGHLARNCPNPPVPGAGRGGMVPRGGFAPVRGG 118
Query: 572 --------ICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 119 FVGGPRPATCYKCGGPNHFARDC 141
>gi|56609311|gb|AAW03265.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 378 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 429
Query: 591 KDRLRIS 597
R+ S
Sbjct: 430 LGRIWPS 436
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 388 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 432
>gi|56609271|gb|AAW03229.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 378 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 429
Query: 591 KDRLRISD 598
R+ S
Sbjct: 430 LGRIWPSS 437
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 388 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 432
>gi|407734565|gb|AFU28133.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 11/67 (16%)
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFK 591
++ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 386 NVKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFL 437
Query: 592 DRLRISD 598
R+ S+
Sbjct: 438 GRIWPSN 444
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 395 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 439
>gi|407732463|gb|AFU26362.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 379 SNFKGQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 430
Query: 591 KDRLRISD 598
+L S+
Sbjct: 431 LGKLWPSN 438
>gi|259128810|gb|ACV95102.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 434
>gi|241949687|ref|XP_002417566.1| mRNA processing and export modulator, putative [Candida
dubliniensis CD36]
gi|223640904|emb|CAX45221.1| mRNA processing and export modulator, putative [Candida
dubliniensis CD36]
Length = 380
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 54/150 (36%), Gaps = 51/150 (34%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C+NC K HT A C + C CG+ +H S CP T
Sbjct: 88 CANCHKRGHTRAKCTVVI----CHKCGAV------------------DDHYESQCPTTI- 124
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH----LCCVNSSIIG-- 538
C RCG+ GH +S C+ + K+ C C SF H + S I
Sbjct: 125 -------ICGRCGEKGHIVSQCKSKIR----KRQYCRTCDSFKHGDENCPSIWRSYITKS 173
Query: 539 -----------LKQVSCYNCGQSGHLGPEC 557
L ++ CYNC + H G EC
Sbjct: 174 QSQDSNEESSVLPRIYCYNCASNEHFGDEC 203
>gi|195954537|gb|ACG58961.1| gag protein [Human immunodeficiency virus 1]
gi|238734305|gb|ACR55525.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRISD 598
R+ S
Sbjct: 432 LGRIWPSS 439
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|371559445|gb|AEX36630.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 381 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 432
Query: 591 KDRLRIS 597
R+ S
Sbjct: 433 LGRIWPS 439
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 391 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 435
>gi|255710197|gb|ACU30918.1| E3 ubiquitin ligase methyltransferase [Ochlerotatus triseriatus]
Length = 136
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +C GH C+ +DL + CY C GH+ + CYNC QSGH
Sbjct: 29 CYKCNQMGHFARDCK-----EDLDR--CYRCNGSGHI--ARDCSLSPDDSCCYNCNQSGH 79
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
L A +C + + N+ CY C K GH +R C
Sbjct: 80 L----ARNCPEKSDRDMNVSCYNCNKSGHISRNC 109
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 56/144 (38%), Gaps = 41/144 (28%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ C H ++CK+ D C+ GS H+A DC + + C C SGH +
Sbjct: 29 CYKCNQMGHFARDCKEDLDRCYRCNGSGHIARDCSLSPD-----DSCCYNCNQSGHLARN 83
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C + D VSCYNC +SGH+ C
Sbjct: 84 CPEKSDRD--------------------------MNVSCYNCNKSGHISRNCPT------ 111
Query: 566 GKKSNLICYKCGKEGHFARRCGSN 589
G KS CY CGK GH +R C N
Sbjct: 112 GDKS---CYSCGKIGHLSRDCTEN 132
>gi|119710439|gb|ABL96416.1| gag-pol fusion protein [Human immunodeficiency virus 1]
Length = 275
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCGKEGH + C + R DL
Sbjct: 55 KTVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFFR-EDL 105
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P AR F +N G GR+N+ E G
Sbjct: 106 AF----PQGEAREFSSEQTRANSPTRGELQVWGRDNNSTAEAG 144
>gi|56609241|gb|AAW03202.1| gag protein [Human immunodeficiency virus 1]
gi|56609291|gb|AAW03247.1| gag protein [Human immunodeficiency virus 1]
gi|56609327|gb|AAW03279.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 378 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 429
Query: 591 KDRLRIS 597
R+ S
Sbjct: 430 LGRIWPS 436
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 388 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 432
>gi|56609261|gb|AAW03220.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 378 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 429
Query: 591 KDRLRIS 597
R+ S
Sbjct: 430 LGRIWPS 436
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 388 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 432
>gi|114689169|ref|XP_529043.2| PREDICTED: zinc finger CCHC domain-containing protein 13 [Pan
troglodytes]
gi|397507945|ref|XP_003824438.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like [Pan
paniscus]
Length = 170
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 47/116 (40%), Gaps = 26/116 (22%)
Query: 488 LSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC----------CVNSSII 537
L N C CG SGH C+ ++ CY C GHL C + +
Sbjct: 62 LLGNICYNCGRSGHIAKDCK---EPKRERRQHCYTCGRLGHLARDCDRQKEQKCYSCGKL 118
Query: 538 G-----LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS 588
G QV CY CG+ GH+ C+ K CY+CGK GH A+ C S
Sbjct: 119 GHIQKDCAQVKCYRCGEIGHVAINCS--------KTRPGQCYRCGKSGHLAKECPS 166
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 52/135 (38%), Gaps = 39/135 (28%)
Query: 425 CSNCGKENHTAATCKMQKQNK--PCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NCG+ H A CK K+ + C+ CG H LA DC
Sbjct: 67 CYNCGRSGHIAKDCKEPKRERRQHCYTCGRLGH-------------------LARDC--- 104
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
+ C CG GH D +++CY C GH+ +N S Q
Sbjct: 105 ---DRQKEQKCYSCGKLGHI---------QKDCAQVKCYRCGEIGHVA-INCSKTRPGQ- 150
Query: 543 SCYNCGQSGHLGPEC 557
CY CG+SGHL EC
Sbjct: 151 -CYRCGKSGHLAKEC 164
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C CG+ H A C QK+ K C+ CG H K+C Q C+ H+A +C T
Sbjct: 89 QHCYTCGRLGHLARDCDRQKEQK-CYSCGKLGHIQKDCAQ-VKCYRCGEIGHVAINCSKT 146
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGE 509
G C RCG SGH C E
Sbjct: 147 RPGQ------CYRCGKSGHLAKECPSE 167
>gi|50545241|ref|XP_500158.1| YALI0A17292p [Yarrowia lipolytica]
gi|49646023|emb|CAG84090.1| YALI0A17292p [Yarrowia lipolytica CLIB122]
Length = 351
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 59/149 (39%), Gaps = 26/149 (17%)
Query: 413 RYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFK-HRWKNCKQGQDCFINKG 471
RYF TC C K H +A CK+ + CF CG+ + H +C + C
Sbjct: 64 RYFGKEEEQGPTCRTCHKRGHISADCKVMR----CFTCGALEDHDTADCTMLRKCSNCGE 119
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
S HL ++C + + + FC RC H C + D +K +
Sbjct: 120 SGHLRAECTQSKR-----TIFCWRCDSRIHTEDKCHLIWR-DYVKDRR------------ 161
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANS 560
G V CY+CG GH G EC ++
Sbjct: 162 ---GPHGTNCVFCYHCGGQGHYGDECTDT 187
>gi|195954508|gb|ACG58947.1| gag protein [Human immunodeficiency virus 1]
gi|238733932|gb|ACR55196.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRIS 597
R+ S
Sbjct: 432 LGRIWPS 438
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|58004795|gb|AAW62458.1| cellular nucleic acid binding protein mutant 1-4 [synthetic
construct]
Length = 126
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 488 LSSNFCLRCGDSGHDLSSC-----------------------EGEYHADDLKKIQCYICK 524
+SSN C +CG +GH C ++ + L I CY C
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDI-CYRCG 59
Query: 525 SFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
GHL + L++ +CYNCG+ GH+ +C K+ CY CGK GH AR
Sbjct: 60 ESGHL----AKDCDLQEDACYNCGRGGHIAKDCKEP-----RKEREQCCYNCGKPGHLAR 110
Query: 585 RC 586
C
Sbjct: 111 DC 112
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 491 NFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQS 550
+ C RCG+SGH C DL++ CY C GH+ ++ CYNCG+
Sbjct: 53 DICYRCGESGHLAKDC-------DLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKP 105
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGK 578
GHL A CE + +K CY CG+
Sbjct: 106 GHL----ARDCEHADEQK----CYSCGE 125
>gi|407735689|gb|AFU29069.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 384 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 435
Query: 591 KDRLRIS 597
R+ S
Sbjct: 436 LGRIWPS 442
>gi|158967318|gb|ABW86670.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C+A K C+KCGKEGH + C +NF R+
Sbjct: 385 GQKRIKCFNCGKEGHL----ARNCKAPRKKG----CWKCGKEGHQMKDCTERQANFLGRI 436
Query: 595 RIS 597
S
Sbjct: 437 WPS 439
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A CK ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 391 CFNCGKEGHLARNCKAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 435
>gi|119710435|gb|ABL96414.1| gag-pol fusion protein [Human immunodeficiency virus 1]
Length = 275
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCGKEGH + C + R DL
Sbjct: 55 KTVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFFR-EDL 105
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P AR F +N G GR+N+ E G
Sbjct: 106 AF----PQGEAREFSSEQTRANSPTRGELQVWGRDNNSTAEAG 144
>gi|407735705|gb|AFU29083.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 384 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 435
Query: 591 KDRLRIS 597
R+ S
Sbjct: 436 LGRIWPS 442
>gi|347596128|gb|AEP14040.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 27/106 (25%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 385 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 436
Query: 595 RISDLLFTAERPPTRAR--HFVGSNGTPHGLGNAQGRENDDQREKG 638
PP + R +F S P A EN + RE+G
Sbjct: 437 ----------WPPNKGRPGNFPQSRPEP----TAPPAENWEMREEG 468
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 391 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 435
>gi|56609301|gb|AAW03256.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 378 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 429
Query: 591 KDRLRIS 597
R+ S
Sbjct: 430 LGRIWPS 436
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 388 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 432
>gi|308152394|emb|CBX25649.1| gag-pol polyprotein, intergenic region [Small ruminant lentivirus]
Length = 214
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 10/49 (20%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G K+ +CYNCG+ GHL +C +S CYKCG++GH + C
Sbjct: 171 GAKEQTCYNCGKPGHLARQC----------RSGKTCYKCGRKGHIQKDC 209
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 374 QKKRRKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENH 433
QK KK + ++K++ R+ + Y +++L + R G +TC NCGK H
Sbjct: 128 QKVLGKKAQASTVEEKLQACREVESSTYK--MQLLAQALRPTGERGAKEQTCYNCGKPGH 185
Query: 434 TAATCKMQKQNKPCFLCGSFKHRWKNCKQG 463
A C + K C+ CG H K+C+QG
Sbjct: 186 LARQC---RSGKTCYKCGRKGHIQKDCRQG 212
>gi|259122651|gb|ACV92619.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C +NF ++
Sbjct: 383 GQKKIKCFNCGKDGHL----ARNCRAPRKKG----CWKCGKEGHQMRDCTERQANFLGKI 434
Query: 595 RISD 598
S+
Sbjct: 435 WPSN 438
>gi|409181520|gb|AFV26750.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRISD 598
R+ S
Sbjct: 432 LGRIWPSS 439
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|407735681|gb|AFU29062.1| gag protein [Human immunodeficiency virus 1]
gi|407735721|gb|AFU29097.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 384 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 435
Query: 591 KDRLRIS 597
R+ S
Sbjct: 436 LGRIWPS 442
>gi|37934014|gb|AAO43844.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 570
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A + C+KCGKEGH + C + R DL
Sbjct: 31 KXVKCFNCGKEGHI----ARNCRAPRKRG----CWKCGKEGHQMKDCTERQANFFR-EDL 81
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P AR F +N G GR N+ E G
Sbjct: 82 AF----PQGEAREFXSEQTRANSPTRGELQVWGRXNNSPSEAG 120
>gi|56609321|gb|AAW03274.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 378 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 429
Query: 591 KDRLRIS 597
R+ S
Sbjct: 430 LGRIWPS 436
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 388 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 432
>gi|407735697|gb|AFU29076.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 384 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 435
Query: 591 KDRLRIS 597
R+ S
Sbjct: 436 LGRIWPS 442
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 394 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 438
>gi|195954510|gb|ACG58948.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRIS 597
R+ S
Sbjct: 432 LGRIWPS 438
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|389628260|ref|XP_003711783.1| zinc knuckle domain-containing protein [Magnaporthe oryzae 70-15]
gi|351644115|gb|EHA51976.1| zinc knuckle domain-containing protein [Magnaporthe oryzae 70-15]
Length = 199
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 76/198 (38%), Gaps = 45/198 (22%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQDCFINKGSEHLASDC 479
TC CG+ NH A C + K C+ CG H + C K + C+ H++ DC
Sbjct: 15 TCYTCGQPNHQARDCPNRGAAK-CYNCGGEGHISRACPEEPKDQKICYRCSQPGHISRDC 73
Query: 480 PGTDQGNNLSSNF-------CLRCGDSGHDLSSCEGEYHADDLKKIQ------------- 519
P G C +CG+ GH +C +
Sbjct: 74 PSGGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSKGGYGGGGGGGYSGGGGGYGGGYGG 133
Query: 520 ------CYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL 571
CY C GH+ CVN S CYNCG++GH +C+ + G+K
Sbjct: 134 GAGGKTCYSCGGVGHMSRDCVNGS-------KCYNCGETGHFSRDCSK--RSTTGEK--- 181
Query: 572 ICYKCGKEGHFARRCGSN 589
+CYKC + GH C +N
Sbjct: 182 MCYKCQQPGHVQAECPNN 199
>gi|6651471|gb|AAF22319.1|AF193276_1 gag polyprotein [HIV-1 CRF03_AB]
Length = 498
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRIS 597
R+ S
Sbjct: 432 LGRIWPS 438
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|407733077|gb|AFU26872.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|259128801|gb|ACV95098.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 434
>gi|156720287|dbj|BAF76796.1| Vasa-related protein [Enchytraeus japonensis]
Length = 990
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 73/194 (37%), Gaps = 26/194 (13%)
Query: 419 GWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKN------------CKQGQDC 466
G + C NCG++ H + C ++++ R N + + C
Sbjct: 265 GSQNRGCFNCGQDGHMSRDCPEPRRDRGAMPNDRGDSRRTNDGMRNDGMRGEGARGPRAC 324
Query: 467 FINKGSEHLASDCPGTDQGNNLSSN---FCLRCGDSGHDLSSC----EGEYHADDLKKIQ 519
+ H++ DCP + + S C CG+ GH C + + +
Sbjct: 325 YNCGSDAHMSRDCPEPRKERSNDSRPLRACYNCGNEGHMTRDCTEPRKERSNENSRPPRA 384
Query: 520 CYICKSFGHLC--CVNS-----SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI 572
C+ C S H+ C + +C+NCG H+ EC + G K + +
Sbjct: 385 CFNCGSEAHMSRDCPEPKKERPNDNSRPPRACFNCGSEAHMSRECPEPKKEREGGKPSGV 444
Query: 573 CYKCGKEGHFARRC 586
C++C EGH A+ C
Sbjct: 445 CFRCDLEGHMAKDC 458
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 543 SCYNCGQSGHLGPECANS-CEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
+CYNCG H+ +C E N + CY CG EGH R C K+R
Sbjct: 323 ACYNCGSDAHMSRDCPEPRKERSNDSRPLRACYNCGNEGHMTRDCTEPRKER 374
>gi|157876790|ref|XP_001686737.1| putative poly-zinc finger protein 2 [Leishmania major strain
Friedlin]
gi|68129812|emb|CAJ09118.1| putative poly-zinc finger protein 2 [Leishmania major strain
Friedlin]
Length = 135
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 17/144 (11%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC-----KQGQDCFINKGSEHLASD 478
C CG H + C + PCF CG H + C + CF + H A +
Sbjct: 2 VCYRCGGVGHQSRECTSAADSAPCFRCGKPGHVARECVSTITAEEAPCFYCQKPGHRARE 61
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL--CCVNSSI 536
CP + + C C GH S C H CY+C GH+ C +
Sbjct: 62 CP--EAPPKSETVICYNCSQKGHIASECTNPAH--------CYLCNEDGHIGRSCPTAPK 111
Query: 537 IGLKQVSCYNCGQSGHLGPECANS 560
+ +C CG+ GHL +C ++
Sbjct: 112 RSVADKTCRKCGRKGHLRKDCPDA 135
>gi|308809325|ref|XP_003081972.1| putative DAK2 domain containing protein (ISS) [Ostreococcus tauri]
gi|116060439|emb|CAL55775.1| putative DAK2 domain containing protein (ISS), partial
[Ostreococcus tauri]
Length = 843
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 418 PGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHR-WKNCKQGQDCFINKGSEHLA 476
P ++ C+ CG+ H A C + P G+ R + G C G H A
Sbjct: 14 PSRGTDRCNRCGQIGHWAGECALPDTRGP----GASPMRPMGGARPGDKCSRCGGLGHYA 69
Query: 477 SDCP---GTDQGNNLSSNFCLRCGDSGHDLSSCE----GEYHADDLKKIQ----CYICKS 525
DCP G G C CG GH C G Y A + C C
Sbjct: 70 RDCPSPVGAIMGVGARDGACRICGRMGHFARECRDRAGGGYDAPRRRLAGAEDVCNRCGE 129
Query: 526 FGHLCCV-----NSSIIGLKQV-SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKE 579
GH + N K++ +C NCG+ GH+ EC +C C +E
Sbjct: 130 KGHWANMCPQPDNRPESERKKLGACRNCGEEGHIAKECPKP----------QMCRICKQE 179
Query: 580 GHFARRC 586
GH A+ C
Sbjct: 180 GHIAKEC 186
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKP---------CFLCGSFKHRWKNCKQGQDCFINKGSE 473
+ C+ CG++ H A C Q N+P C CG H K C + Q C I K
Sbjct: 122 DVCNRCGEKGHWANMCP-QPDNRPESERKKLGACRNCGEEGHIAKECPKPQMCRICKQEG 180
Query: 474 HLASDCP 480
H+A +CP
Sbjct: 181 HIAKECP 187
>gi|238733941|gb|ACR55204.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRIS 597
R+ S
Sbjct: 432 LGRIWPS 438
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|227133688|gb|ACP19724.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 377 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 428
Query: 591 KDRLRIS 597
R+ S
Sbjct: 429 LGRIWPS 435
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 387 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 431
>gi|440298472|gb|ELP91108.1| cellular nucleic acid binding protein, putative [Entamoeba invadens
IP1]
Length = 427
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 60/161 (37%), Gaps = 26/161 (16%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC----- 479
C CG HT C ++ CF+CG H C Q ++ + H ++
Sbjct: 123 CYTCGLFGHTTKYCPNSQEAGKCFICGESGHFSNKCPQREEYYNTNKQNHQGTNEEEYYE 182
Query: 480 -----PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI---CKSFGHLCC 531
P TDQ C +CG S H +C + D+ K Q K F
Sbjct: 183 EQEEDPHTDQQ-------CYKCGSSDHIAKNCPDAWKYDEKMKEQITHENGSKEFQENEP 235
Query: 532 VNSSII------GLKQVSCYNCGQSGHLGPECANSCEALNG 566
V I KQV CY CG H+G +C ++ + +G
Sbjct: 236 VQEKSIEKVKEKKTKQVGCYKCGSLDHIGRDCPDAWKYHDG 276
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 26/99 (26%)
Query: 515 LKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSN-- 570
++ ++CY C FGH C NS G C+ CG+SGH +C E N K N
Sbjct: 118 VETMKCYTCGLFGHTTKYCPNSQEAG----KCFICGESGHFSNKCPQREEYYNTNKQNHQ 173
Query: 571 ------------------LICYKCGKEGHFARRCGSNFK 591
CYKCG H A+ C +K
Sbjct: 174 GTNEEEYYEEQEEDPHTDQQCYKCGSSDHIAKNCPDAWK 212
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 63/161 (39%), Gaps = 15/161 (9%)
Query: 447 CFLCGSFKHRWKNCKQGQD---CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDL 503
C+ CG F H K C Q+ CFI S H ++ CP ++ N + G +
Sbjct: 123 CYTCGLFGHTTKYCPNSQEAGKCFICGESGHFSNKCPQREEYYNTNKQ-----NHQGTNE 177
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK---QVSCYNCGQSGHLG-PEC 557
E D QCY C S H+ C ++ K Q++ N + P
Sbjct: 178 EEYYEEQEEDPHTDQQCYKCGSSDHIAKNCPDAWKYDEKMKEQITHENGSKEFQENEPVQ 237
Query: 558 ANSCEALNGKKSNLI-CYKCGKEGHFARRCGSNFKDRLRIS 597
S E + KK+ + CYKCG H R C +K +S
Sbjct: 238 EKSIEKVKEKKTKQVGCYKCGSLDHIGRDCPDAWKYHDGVS 278
>gi|18699114|gb|AAL78393.1|AF413968_1 gag protein [Human immunodeficiency virus 1]
Length = 219
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 101 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKNCTERQANF 152
Query: 591 KDRLRIS 597
R+ S
Sbjct: 153 LGRIWPS 159
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ KNC + Q F+ +
Sbjct: 111 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKNCTERQANFLGR 155
>gi|371559484|gb|AEX36665.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRIS 597
R+ S
Sbjct: 432 LGRIWPS 438
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|348682102|gb|EGZ21918.1| hypothetical protein PHYSODRAFT_251378 [Phytophthora sojae]
Length = 367
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 10/133 (7%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C +CG+ H A+ C K PC+ C H+ C C H DC
Sbjct: 238 CFHCGEVGHMASVCMNDKLQPPCYYCALRGHQSWACPN-LPCTNCLQLGHQERDC----S 292
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSC 544
+L + C CG +GH +C+ + D+ + +F + G +C
Sbjct: 293 NRSLDIDPCSICGRAGHIEDNCDNNHTLDECDTYREPTATNFAA-----RTASGRTVQTC 347
Query: 545 YNCGQSGHLGPEC 557
Y C ++GH+ EC
Sbjct: 348 YECNEAGHIAAEC 360
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 48/128 (37%), Gaps = 39/128 (30%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH-------LCCVNSSIIGLKQVSCY 545
C CG+ GH S C +D + CY C GH L C N +G ++ C
Sbjct: 238 CFHCGEVGHMASVC-----MNDKLQPPCYYCALRGHQSWACPNLPCTNCLQLGHQERDCS 292
Query: 546 N----------CGQSGHLGPECANS-----CEALN------------GKKSNLICYKCGK 578
N CG++GH+ C N+ C+ ++ CY+C +
Sbjct: 293 NRSLDIDPCSICGRAGHIEDNCDNNHTLDECDTYREPTATNFAARTASGRTVQTCYECNE 352
Query: 579 EGHFARRC 586
GH A C
Sbjct: 353 AGHIAAEC 360
>gi|227057923|gb|ACP18927.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKBCTERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ KBC + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKBCTERQANFLGR 434
>gi|406864044|gb|EKD17090.1| zinc knuckle protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 223
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 70/200 (35%), Gaps = 48/200 (24%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL--CYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSC-----------------------------EGE 509
CP +S C CG GH SC G
Sbjct: 66 CPTLRLSGAGTSGRCYNCGLPGHLARSCPAPAGPGPIPGVGRGLGAPRGGFGGGYAPRGA 125
Query: 510 YHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKS 569
+ A + CY C H + + + CY CG+ GH+ + C A NG
Sbjct: 126 F-AGGPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPL 176
Query: 570 NL---ICYKCGKEGHFARRC 586
N CY+CG+ GH +R C
Sbjct: 177 NTAGKTCYQCGEAGHISRDC 196
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS-- 543
++LS C +CG+ GH C A+ L CY CK GH S+ L + +
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCS---SAERL----CYNCKQPGH----ESNGCPLPRTTEA 50
Query: 544 --CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY+C GH+ +C L+G ++ CY CG GH AR C
Sbjct: 51 KQCYHCQGLGHVQADCPT--LRLSGAGTSGRCYNCGLPGHLARSC 93
>gi|300719904|gb|ADK32908.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 377 SNFXGXKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANF 428
Query: 591 KDRLRIS 597
++ S
Sbjct: 429 LGKIWPS 435
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 387 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGK 431
>gi|259127941|gb|ACV94742.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQTKDCTERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
>gi|259124937|gb|ACV93545.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C+A K C+KCGKEGH + C +NF R+
Sbjct: 381 GQKRIKCFNCGKEGHL----ARNCKAPRKKG----CWKCGKEGHQMKDCTERQANFLGRI 432
Query: 595 RIS 597
S
Sbjct: 433 WPS 435
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A CK ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 387 CFNCGKEGHLARNCKAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 431
>gi|224986132|gb|ACN74715.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 17/103 (16%)
Query: 503 LSSCEG----EYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
+++C+G + A L + ++ ++ H+ + G K++ C+NCG+ GHL A
Sbjct: 347 MTACQGVGGPSHKARVLAEAMSHVQQT--HVMMQRGNFKGQKRIKCFNCGKEGHL----A 400
Query: 559 NSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRISD 598
+C A K C+KCGKEGH + C +NF ++ S+
Sbjct: 401 RNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWPSN 439
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|407739343|gb|AFU32139.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
GL+++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GLRKIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCG+E H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGREGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|225710718|gb|ACO11205.1| Zinc finger CCHC domain-containing protein 9 [Caligus
rogercresseyi]
Length = 402
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 466 CFINKGSEHLASDCP---GTDQGNNLSS-NFCLRCGDSGHDLSSCEGEYHADDLKKIQ-C 520
C++ + H SDCP G+ + + C +CG + H C+ + + + C
Sbjct: 256 CYLCRKPGHFLSDCPEAEGSKSAKTVGTMGSCFKCGSAEHSSKDCQSKLKGEAAYRFAVC 315
Query: 521 YICKSFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEAL 564
+IC GHL C N + K C CG HL EC E +
Sbjct: 316 FICNQTGHLAKACPDNPKGLYPKGGGCRFCGSVEHLKSECKRKMEKV 362
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQV-------SCYNCGQSGHLGPECANSCEALNGKK 568
KK+ CY+C+ GH G K SC+ CG + H +C + L G+
Sbjct: 252 KKLVCYLCRKPGHFLSDCPEAEGSKSAKTVGTMGSCFKCGSAEHSSKDCQSK---LKGEA 308
Query: 569 SN--LICYKCGKEGHFARRCGSNFK 591
+ +C+ C + GH A+ C N K
Sbjct: 309 AYRFAVCFICNQTGHLAKACPDNPK 333
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
Query: 375 KKRRKKTRVIEAKDKVEDARKENE-AKYNVVLRMLLRKPRYFDPPGWNSETCSNCGKENH 433
K+++ + +E K E R ENE A+ ++ L RKP +F S+C E
Sbjct: 224 KEKKIMNKELEETLKKERRRAENELARSKKLVCYLCRKPGHF---------LSDC-PEAE 273
Query: 434 TAATCKMQKQNKPCFLCGSFKHRWKNCK---QGQD------CFINKGSEHLASDCPGTDQ 484
+ + K CF CGS +H K+C+ +G+ CFI + HLA CP +
Sbjct: 274 GSKSAKTVGTMGSCFKCGSAEHSSKDCQSKLKGEAAYRFAVCFICNQTGHLAKACPDNPK 333
Query: 485 GNNLSSNFCLRCGDSGHDLSSC 506
G C CG H S C
Sbjct: 334 GLYPKGGGCRFCGSVEHLKSEC 355
>gi|114841961|dbj|BAF32390.1| Gag [Human immunodeficiency virus 1]
gi|114841991|dbj|BAF32417.1| Gag [Human immunodeficiency virus 1]
Length = 495
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDCTTERQVNFLGK 435
Query: 594 LRISD 598
+ S+
Sbjct: 436 IWPSN 440
>gi|371559514|gb|AEX36692.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRIS 597
R+ S
Sbjct: 432 LGRIWPS 438
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|259128835|gb|ACV95113.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 434
>gi|407739353|gb|AFU32147.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
GL+++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GLRKIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCG+E H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGREGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|371559464|gb|AEX36647.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRISD 598
R+ S
Sbjct: 432 LGRIWPSS 439
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGR 434
>gi|315043931|ref|XP_003171341.1| DNA-binding protein HEXBP [Arthroderma gypseum CBS 118893]
gi|311343684|gb|EFR02887.1| DNA-binding protein HEXBP [Arthroderma gypseum CBS 118893]
Length = 208
Score = 47.0 bits (110), Expect = 0.033, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 67/184 (36%), Gaps = 35/184 (19%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQK-----QNKPCFLCGSFKHRWKNCKQGQDCFINKG 471
P ++ C +C H A C + N C+ C H +NC G +
Sbjct: 13 PRTTETKQCYHCQGLGHVQADCPTLRLNGGASNARCYNCNMPGHLARNCPSGG--MQQQN 70
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
+ + + P NN R G +G+ ++ CY C H
Sbjct: 71 PQPVRNTGPARGAFNNAG----FRGGSAGYPRAA-------------TCYKCGGPNHF-- 111
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNG---KKSNLICYKCGKEGHFARRCGS 588
+ + + CY CG+ GH+ + C A NG +CYKC + GH +R C +
Sbjct: 112 --ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLSSVGKVCYKCSQAGHISRDCPT 165
Query: 589 NFKD 592
N D
Sbjct: 166 NNPD 169
>gi|114841971|dbj|BAF32399.1| Gag [Human immunodeficiency virus 1]
Length = 495
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDCTTERQVNFLGK 435
Query: 594 LRISD 598
+ S+
Sbjct: 436 IWPSN 440
>gi|407739323|gb|AFU32123.1| gag protein [Human immunodeficiency virus 1]
gi|407739333|gb|AFU32131.1| gag protein [Human immunodeficiency virus 1]
gi|407739338|gb|AFU32135.1| gag protein [Human immunodeficiency virus 1]
gi|407739348|gb|AFU32143.1| gag protein [Human immunodeficiency virus 1]
gi|407739358|gb|AFU32151.1| gag protein [Human immunodeficiency virus 1]
gi|407739363|gb|AFU32155.1| gag protein [Human immunodeficiency virus 1]
gi|407739368|gb|AFU32159.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
GL+++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GLRKIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCG+E H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGREGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|112982721|ref|NP_001037117.1| zinc finger protein [Bombyx mori]
gi|59858992|gb|AAX09282.1| zinc finger protein [Bombyx mori]
Length = 143
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 62/156 (39%), Gaps = 39/156 (25%)
Query: 447 CFLCGSFKHRWKNCKQG-------------QDCFINKGSEHLASDCPGTDQGNNLSSNFC 493
C+ C H + C QG + CF + H A DC ++ C
Sbjct: 6 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC-------KEEADRC 58
Query: 494 LRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV---SCYNCGQS 550
RC +GH C A + CY C GH+ + G ++ +CYNC +S
Sbjct: 59 YRCNGTGHIAREC-----AQSPDEPSCYNCNKTGHI--ARNCPEGGRESATQTCYNCNKS 111
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH+ C + G K+ CY CGK GH +R C
Sbjct: 112 GHISRNCPD------GTKT---CYVCGKPGHISREC 138
>gi|300720135|gb|ADK33062.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G++ S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 369 GNIMMQKSNFKGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 420
>gi|119710449|gb|ABL96421.1| gag-pol fusion protein [Human immunodeficiency virus 1]
Length = 275
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCGKEGH + C + R DL
Sbjct: 55 KTVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFFR-EDL 105
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P AR F +N G GR+N+ E G
Sbjct: 106 AF----PQGEAREFSSEQTRANSPTRGGLQVWGRDNNSTAEAG 144
>gi|114841811|dbj|BAF32255.1| Gag [Human immunodeficiency virus 1]
gi|114841821|dbj|BAF32264.1| Gag [Human immunodeficiency virus 1]
gi|114841831|dbj|BAF32273.1| Gag [Human immunodeficiency virus 1]
gi|114841851|dbj|BAF32291.1| Gag [Human immunodeficiency virus 1]
gi|114841861|dbj|BAF32300.1| Gag [Human immunodeficiency virus 1]
gi|114841891|dbj|BAF32327.1| Gag [Human immunodeficiency virus 1]
gi|114841911|dbj|BAF32345.1| Gag [Human immunodeficiency virus 1]
gi|114841921|dbj|BAF32354.1| Gag [Human immunodeficiency virus 1]
gi|114841931|dbj|BAF32363.1| Gag [Human immunodeficiency virus 1]
gi|114841941|dbj|BAF32372.1| Gag [Human immunodeficiency virus 1]
gi|114842001|dbj|BAF32426.1| Gag [Human immunodeficiency virus 1]
gi|114842011|dbj|BAF32435.1| Gag [Human immunodeficiency virus 1]
Length = 497
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDCTTERQVNFLGK 435
Query: 594 LRISD 598
+ S+
Sbjct: 436 IWPSN 440
>gi|374429809|gb|AEZ51135.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 373 AHIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 424
Query: 587 G---SNFKDRLRISD 598
+NF ++ S+
Sbjct: 425 TERQANFLGKIWPSN 439
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|114841701|dbj|BAF32156.1| Gag [Human immunodeficiency virus 1]
Length = 497
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDCTTERQANFLGK 435
Query: 594 LRISD 598
+ S+
Sbjct: 436 IWPSN 440
>gi|114841841|dbj|BAF32282.1| Gag [Human immunodeficiency virus 1]
gi|114841871|dbj|BAF32309.1| Gag [Human immunodeficiency virus 1]
gi|114841881|dbj|BAF32318.1| Gag [Human immunodeficiency virus 1]
gi|114841901|dbj|BAF32336.1| Gag [Human immunodeficiency virus 1]
Length = 497
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDCTTERQVNFLGK 435
Query: 594 LRISD 598
+ S+
Sbjct: 436 IWPSN 440
>gi|114841951|dbj|BAF32381.1| Gag [Human immunodeficiency virus 1]
Length = 497
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDCTTERQVNFLGK 435
Query: 594 LRISD 598
+ S+
Sbjct: 436 IWPSN 440
>gi|114841711|dbj|BAF32165.1| Gag [Human immunodeficiency virus 1]
gi|114841731|dbj|BAF32183.1| Gag [Human immunodeficiency virus 1]
Length = 497
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDCTTERQANFLGK 435
Query: 594 LRISD 598
+ S+
Sbjct: 436 IWPSN 440
>gi|77416888|sp|P20892.3|POL_HV1OY RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1434
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 13/74 (17%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCG+EGH + C + LR DL
Sbjct: 387 KTVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGREGHQMKDCTERQANFLR-EDL 437
Query: 600 LFTAERPPTRARHF 613
F P +AR F
Sbjct: 438 AF----PQGKAREF 447
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+
Sbjct: 391 CFNCGKEGHIAKNCRAPRK-KGCWKCGREGHQMKDCTERQANFL 433
>gi|407739328|gb|AFU32127.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
GL+++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GLRKIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCG+E H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGREGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|299929725|gb|ADJ58070.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 19/104 (18%)
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVN-----SSIIGLKQVSCYNCGQSGHLGPEC 557
+++C+G ++ + ++ H+ VN + G K++ C+NCG+ GHL
Sbjct: 347 MTACQGVGGPSHKARV---LAEAMSHVQPVNIMMQRGNFKGQKRIKCFNCGKEGHL---- 399
Query: 558 ANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRISD 598
A +C A K C+KCGKEGH + C +NF ++ S+
Sbjct: 400 ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKIWPSN 439
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|403183422|gb|EJY58088.1| AAEL017419-PA [Aedes aegypti]
Length = 157
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +C GH C+ +DL + CY C GH+ + CYNC QSGH
Sbjct: 50 CYKCNQMGHFARDCK-----EDLDR--CYRCNGSGHI--ARDCSLSPDDSCCYNCNQSGH 100
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
L A +C + + N+ CY C K GH +R C
Sbjct: 101 L----ARNCPEKSDRDMNVSCYNCNKSGHISRNC 130
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 58/146 (39%), Gaps = 45/146 (30%)
Query: 447 CFLCGSFKHRWKNCKQGQD-CFINKGSEHLASDCPGTDQGNNLSSN--FCLRCGDSGHDL 503
C+ C H ++CK+ D C+ GS H+A DC +LS + C C SGH
Sbjct: 50 CYKCNQMGHFARDCKEDLDRCYRCNGSGHIARDC-------SLSPDDSCCYNCNQSGHLA 102
Query: 504 SSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEA 563
+C + D VSCYNC +SGH+ C
Sbjct: 103 RNCPEKSDRD--------------------------MNVSCYNCNKSGHISRNCPT---- 132
Query: 564 LNGKKSNLICYKCGKEGHFARRCGSN 589
G KS CY CGK GH +R C N
Sbjct: 133 --GDKS---CYSCGKIGHLSRDCTEN 153
>gi|114841761|dbj|BAF32210.1| Gag [Human immunodeficiency virus 1]
Length = 497
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDCTTERQANFLGK 435
Query: 594 LRISD 598
+ S+
Sbjct: 436 IWPSN 440
>gi|299930203|gb|ADJ58309.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 19/103 (18%)
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVN-----SSIIGLKQVSCYNCGQSGHLGPEC 557
+++C+G ++ + ++ GH+ N + G K++ C+NCG+ GHL
Sbjct: 347 MTACQGVGGPSQKARV---LAEAMGHVQHANIMMQRGNFKGQKRIKCFNCGKEGHL---- 399
Query: 558 ANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRIS 597
A +C A K C+KCGKEGH + C +NF +L S
Sbjct: 400 ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKLWPS 438
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|115461691|ref|NP_001054445.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|52353639|gb|AAU44205.1| unknown protein [Oryza sativa Japonica Group]
gi|113577996|dbj|BAF16359.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|222629944|gb|EEE62076.1| hypothetical protein OsJ_16860 [Oryza sativa Japonica Group]
Length = 951
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 519 QCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKC 576
+CY CK GH C S GL+ C+ C Q GH +C ++ G + C+KC
Sbjct: 860 ECYKCKQPGHYARDCPGQSTGGLE---CFKCKQPGHFSRDCP--VQSTGGSE----CFKC 910
Query: 577 GKEGHFARRC 586
+ GHFAR C
Sbjct: 911 KQPGHFARDC 920
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 16/115 (13%)
Query: 421 NSETCSNCGKENHTAATCK------MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEH 474
N +TCS CG H+A C MQ+ + G++ N +C+ K H
Sbjct: 812 NLQTCSICGANGHSAQICHVGADMDMQETSAGGSSMGNYNSIAGNGS--SECYKCKQPGH 869
Query: 475 LASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL 529
A DCPG G C +C GH C + +C+ CK GH
Sbjct: 870 YARDCPGQSTGGLE----CFKCKQPGHFSRDCPVQSTGGS----ECFKCKQPGHF 916
>gi|114842021|dbj|BAF32444.1| Gag [Human immunodeficiency virus 1]
Length = 497
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDCTTERQVNFLGK 435
Query: 594 LRISD 598
+ S+
Sbjct: 436 IWPSN 440
>gi|264687821|gb|ACY73901.1| gag protein [Small ruminant lentivirus]
Length = 242
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 10/44 (22%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GHL +C +S ICYKCG++GH + C
Sbjct: 206 TCYNCGKPGHLARQC----------RSGKICYKCGRKGHMQKDC 239
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 388 DKVEDARKENEAKYNV-VLRMLLRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKP 446
+K++ R+ + Y + +L LR R D G +TC NCGK H A C + K
Sbjct: 172 EKLQACREVESSTYKMQLLAQALRPTREKDARG---QTCYNCGKPGHLARQC---RSGKI 225
Query: 447 CFLCGSFKHRWKNCKQG 463
C+ CG H K+C+QG
Sbjct: 226 CYKCGRKGHMQKDCRQG 242
>gi|121945885|dbj|BAF44661.1| RNA helicase [Neobenedenia girellae]
Length = 634
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 62/174 (35%), Gaps = 53/174 (30%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+TC CG+ H C ++ C C + + HLA +CP
Sbjct: 9 QTCRKCGETGHIGRDCPTVGDDRACNFC-------------------QETGHLAKECP-- 47
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLK 540
C CG+ GH C +C C++ GH C +
Sbjct: 48 -------KKPCRNCGELGHHRDECPA--------PPKCGNCRAEGHFIEDCP-------E 85
Query: 541 QVSCYNCGQSGHLGPECANS--CEALN--GKKS----NLICYKCGKEGHFARRC 586
++C NCGQ GH+ C C N G ++ N C CG+ GH +R C
Sbjct: 86 PLTCRNCGQEGHMSSACTEPAKCRECNEEGHQAKDCPNAKCRNCGELGHRSREC 139
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 45/113 (39%), Gaps = 26/113 (23%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQS 550
C +CG++GH C DD C C+ GHL C + C NCG+
Sbjct: 11 CRKCGETGHIGRDCPTV--GDDRA---CNFCQETGHLAKEC--------PKKPCRNCGEL 57
Query: 551 GH------LGPECANSCEA----LNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
GH P+C N C A + L C CG+EGH + C K R
Sbjct: 58 GHHRDECPAPPKCGN-CRAEGHFIEDCPEPLTCRNCGQEGHMSSACTEPAKCR 109
>gi|114841691|dbj|BAF32147.1| Gag [Human immunodeficiency virus 1]
gi|114841791|dbj|BAF32237.1| Gag [Human immunodeficiency virus 1]
Length = 497
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDCTTERQANFLGK 435
Query: 594 LRISD 598
+ S+
Sbjct: 436 IWPSN 440
>gi|87131079|gb|ABD24149.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C G GH + A+ + +IQ G++ + G K++ C+NCG+ GH
Sbjct: 348 CQGVGGPGH-----KARVLAEAMSQIQQ------GNIMMQRGNFRGQKRIKCFNCGKEGH 396
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRISD 598
L A +C A K C+KCGKEGH + C +NF ++ S+
Sbjct: 397 L----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWPSN 437
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 388 CFNCGKEGHLAKNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 432
>gi|149689038|gb|ABR27834.1| E3 ubiquitin ligase [Triatoma infestans]
Length = 136
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 17/129 (13%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNF--------CLRCGDSGHDLSSCEGEYHADDLKK 517
C+ S H A +CP + C +C GH C+ + +
Sbjct: 6 CYRCNRSGHFARECPQGGDRGSGGGGGGGYRGREKCYKCNRFGHFARECKED-------Q 58
Query: 518 IQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
+CY C + GH+ + SCYNC ++GH+ EC E G S+ CY C
Sbjct: 59 DRCYRCNNVGHI--AKDCQQSTDEPSCYNCNKTGHIARECPEQRENSRGGYSSGPCYTCN 116
Query: 578 KEGHFARRC 586
K GH AR C
Sbjct: 117 KPGHMARDC 125
>gi|33088350|gb|AAP93217.1| gag protein [Human immunodeficiency virus 1]
Length = 154
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C AL + C+KCGKEGH + C +NF R+
Sbjct: 43 GQKRIKCFNCGKEGHL----ARNCRALRKRG----CWKCGKEGHQMKECNERQANFLGRI 94
Query: 595 RISD 598
S
Sbjct: 95 WPSS 98
>gi|392593774|gb|EIW83099.1| hypothetical protein CONPUDRAFT_52948 [Coniophora puteana
RWD-64-598 SS2]
Length = 220
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 21/109 (19%)
Query: 420 WNSETCSNCGKENHTAATCKMQKQNKP-----------CFLCGSFKHRWKNCKQGQD--- 465
+ TC C ++ H A C K + C+ CGS +H CK+ +D
Sbjct: 35 FQDTTCFACRQKGHAAKDCPDTKADGTEQKHSGKVVGICYRCGSTRHNLSRCKEPEDPLI 94
Query: 466 ------CFINKGSEHLASDCP-GTDQGNNLSSNFCLRCGDSGHDLSSCE 507
CF+ G HLAS CP ++G + C CG + H CE
Sbjct: 95 PLPFASCFVCSGKGHLASLCPKNKERGVYPNGGCCKLCGSTAHLAKDCE 143
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
Query: 462 QGQDCFINKGSEHLASDCP-----GTDQGNN-LSSNFCLRCGDSGHDLSSC-EGEYHADD 514
Q CF + H A DCP GT+Q ++ C RCG + H+LS C E E
Sbjct: 36 QDTTCFACRQKGHAAKDCPDTKADGTEQKHSGKVVGICYRCGSTRHNLSRCKEPEDPLIP 95
Query: 515 LKKIQCYICKSFGHLC--CVNSSIIGLKQ--VSCYNCGQSGHLGPEC 557
L C++C GHL C + G+ C CG + HL +C
Sbjct: 96 LPFASCFVCSGKGHLASLCPKNKERGVYPNGGCCKLCGSTAHLAKDC 142
>gi|225710484|gb|ACO11088.1| DNA-binding protein HEXBP [Caligus rogercresseyi]
Length = 397
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C +CG GH C + + C+ C GH + G K C+NC Q GH
Sbjct: 280 CFKCGKEGHFSREC-----TESVGGSNCFKCGEVGHFSRECPTGGGDK---CFNCKQEGH 331
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+ +C +K N+ CY C + GH +R C
Sbjct: 332 ISRDCP--------EKRNVSCYNCNETGHMSREC 357
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQ--GQDCFINKGSEHLASDCPGT 482
C CGKE H + C CF CG H + C G CF K H++ DCP
Sbjct: 280 CFKCGKEGHFSRECTESVGGSNCFKCGEVGHFSRECPTGGGDKCFNCKQEGHISRDCP-- 337
Query: 483 DQGNNLSSNFCLRCGDSGH 501
+ N+S C C ++GH
Sbjct: 338 -EKRNVS---CYNCNETGH 352
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 20/95 (21%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE---GEYHADDLKKIQCYI 522
CF H + +C + G+N C +CG+ GH C G+ +C+
Sbjct: 280 CFKCGKEGHFSRECTESVGGSN-----CFKCGEVGHFSRECPTGGGD---------KCFN 325
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
CK GH ++ + VSCYNC ++GH+ EC
Sbjct: 326 CKQEGH---ISRDCPEKRNVSCYNCNETGHMSREC 357
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
C+ CG+ GH EC S N C+KCG+ GHF+R C + D+
Sbjct: 280 CFKCGKEGHFSRECTESVGGSN-------CFKCGEVGHFSRECPTGGGDK 322
>gi|38198649|ref|NP_938184.1| zinc finger CCHC domain-containing protein 9 [Danio rerio]
gi|29124585|gb|AAH49028.1| Zinc finger, CCHC domain containing 9 [Danio rerio]
Length = 256
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 24/121 (19%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF + H +DCP + + C RCG + H++ C +
Sbjct: 117 CFNCRKPGHGLADCPEANNDEEMGRGICYRCGSTEHEIQRCRAK---------------- 160
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
V+ ++ C+ CGQ+GHL C ++ + L + C CG HF +
Sbjct: 161 ------VDPAMGNYPYAKCFVCGQTGHLSKACPDNPKGLYA--AGGCCRVCGSVEHFQKD 212
Query: 586 C 586
C
Sbjct: 213 C 213
>gi|296484090|tpg|DAA26205.1| TPA: zinc finger protein 9-like [Bos taurus]
Length = 170
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 27/142 (19%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSE-HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSS 505
C+ CG F H K+C D N G H+A DC + ++ + +GH
Sbjct: 48 CYRCGKFGHYAKDCDLLDDICYNCGKXGHIAKDCAEPKREESVLLHL----WQTGHLARD 103
Query: 506 CEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALN 565
C D ++ +CY C GH+ QV CY CG+ H+ A+N
Sbjct: 104 C------DRQEERKCYSCGKXGHI------QQYCTQVKCYRCGEIVHV---------AIN 142
Query: 566 GKKSNLI-CYKCGKEGHFARRC 586
+K N + CY+CG+ GH R C
Sbjct: 143 CRKMNEVNCYRCGESGHLTREC 164
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 54/135 (40%), Gaps = 36/135 (26%)
Query: 423 ETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
+ C NCGK H A C K+ + L H W+ + HLA DC
Sbjct: 66 DICYNCGKXGHIAKDCAEPKREESVLL-----HLWQ-------------TGHLARDCDRQ 107
Query: 483 DQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQV 542
++ C CG GH C +++CY C H V + + +V
Sbjct: 108 EERK------CYSCGKXGHIQQYC---------TQVKCYRCGEIVH---VAINCRKMNEV 149
Query: 543 SCYNCGQSGHLGPEC 557
+CY CG+SGHL EC
Sbjct: 150 NCYRCGESGHLTREC 164
>gi|374429881|gb|AEZ51189.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 19/104 (18%)
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVN-----SSIIGLKQVSCYNCGQSGHLGPEC 557
+++C+G ++ + ++ GH+ N + G K++ C+NCG+ GHL
Sbjct: 347 MTACQGVGGPSHKARV---LAEAMGHIQQANVMMQKGNFKGQKRIKCFNCGKEGHL---- 399
Query: 558 ANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRISD 598
A +C A K C+KCGKEGH + C +NF ++ S+
Sbjct: 400 ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWPSN 439
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|294961|gb|AAA74706.1| gag protein [Simian immunodeficiency virus]
Length = 554
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G + CYNCGQ GH+ +C +A C+ CGK GH AR C
Sbjct: 408 GRSMIKCYNCGQIGHMQKDCKKPLKAK--------CFNCGKTGHLARAC 448
>gi|357518027|ref|XP_003629302.1| Major cold-shock protein [Medicago truncatula]
gi|355523324|gb|AET03778.1| Major cold-shock protein [Medicago truncatula]
Length = 329
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 44/114 (38%), Gaps = 23/114 (20%)
Query: 493 CLRCGDSGHDLSSCEGEYHAD----------DLKKIQCYICKSFGHLC--CV-------- 532
C CGD+GH C+ D + CY C SF H C+
Sbjct: 105 CYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNN 164
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G SCY CG GH+ +CA +G CYKCG+ GH AR C
Sbjct: 165 GGGGYGGGGTSCYRCGGVGHIARDCAT---PSSGGGGGGACYKCGEVGHIARDC 215
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 28/95 (29%)
Query: 520 CYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL------ 571
CY C GH+ C S G +CY CG+ GH+ +C+N +G
Sbjct: 176 CYRCGGVGHIARDCATPSSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGR 235
Query: 572 --------------------ICYKCGKEGHFARRC 586
C+ CGK GHFAR C
Sbjct: 236 FGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDC 270
>gi|259125596|gb|ACV93847.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A SC A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARSCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RISD 598
S
Sbjct: 436 WPSS 439
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A +C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARSCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|66800555|ref|XP_629203.1| hypothetical protein DDB_G0293328 [Dictyostelium discoideum AX4]
gi|60462584|gb|EAL60788.1| hypothetical protein DDB_G0293328 [Dictyostelium discoideum AX4]
Length = 131
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 464 QDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKK--IQCY 521
+ C+ K H++ +CP + + + C C GH C KK I+CY
Sbjct: 7 KSCYKCKEVGHISRNCPKNPEAGDRA---CYVCNVVGHLSRECPQNPQPTFEKKDPIKCY 63
Query: 522 ICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGH 581
C FGH + CYNCG GH+ +C + G+ + CYKC + GH
Sbjct: 64 QCNGFGHF---ARDCRRGRDNKCYNCGGLGHISKDCPSPSTRGQGRDA-AKCYKCNQPGH 119
Query: 582 FARRCGSN 589
A+ C N
Sbjct: 120 IAKACPEN 127
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 514 DLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL 571
++K+ CY CK GH+ C + G + +CY C GHL EC + + KK +
Sbjct: 3 EIKEKSCYKCKEVGHISRNCPKNPEAGDR--ACYVCNVVGHLSRECPQNPQPTFEKKDPI 60
Query: 572 ICYKCGKEGHFARRC 586
CY+C GHFAR C
Sbjct: 61 KCYQCNGFGHFARDC 75
>gi|114841751|dbj|BAF32201.1| Gag [Human immunodeficiency virus 1]
Length = 497
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDCTTERQANFLGK 435
Query: 594 LRISD 598
+ S+
Sbjct: 436 IWPSN 440
>gi|426199186|gb|EKV49111.1| hypothetical protein AGABI2DRAFT_116162 [Agaricus bisporus var.
bisporus H97]
Length = 368
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G +C + G+K + C+ CGK GH + C SN R+R
Sbjct: 295 CHKCGKFGHIGKDCEEKKKNF-GEKKSFKCFSCGKFGHIEKNCRSNRSGRIR 345
>gi|320591584|gb|EFX04023.1| zinc knuckle nucleic acid-binding protein [Grosmannia clavigera
kw1407]
Length = 228
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 66/195 (33%), Gaps = 42/195 (21%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C ++ C+ C H C + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL--CYNCKQPGHESNGCPLPRTTDAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHA------------------------DD 514
CP + C CG GH +C A
Sbjct: 66 CPTLRLSGAATGGRCYSCGQQGHLARACPTPNAAGLGRGVALPPRGGFAGYGRGGFAVGG 125
Query: 515 LKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL--- 571
+ CY C H + + + CY CG+ GH+ E C A NG N
Sbjct: 126 PRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHISRE----CTAPNGGPLNTAGK 177
Query: 572 ICYKCGKEGHFARRC 586
CY+CG+ GH +R C
Sbjct: 178 TCYQCGEAGHISRDC 192
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS-- 543
++LS C +CG+ GH C A+ L CY CK GH S+ L + +
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSS---AERL----CYNCKQPGH----ESNGCPLPRTTDA 50
Query: 544 --CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CY+C GH+ +C L+G + CY CG++GH AR C
Sbjct: 51 KQCYHCQGLGHVQADCPT--LRLSGAATGGRCYSCGQQGHLARAC 93
>gi|259128315|gb|ACV94911.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C R G GH + A+ + ++Q ++ + G K++ C+NCG+ GH
Sbjct: 350 CQRVGGPGH-----KARVLAEAMSQVQ------HTNIMMQRGNFRGQKRIKCFNCGKEGH 398
Query: 553 LGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRIS 597
L A +C A K C+KCGKEGH + C +NF ++ S
Sbjct: 399 L----AKNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGKIWPS 438
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLAKNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGK 434
>gi|171694371|ref|XP_001912110.1| hypothetical protein [Podospora anserina S mat+]
gi|170947134|emb|CAP73939.1| unnamed protein product [Podospora anserina S mat+]
Length = 145
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 65/163 (39%), Gaps = 49/163 (30%)
Query: 442 KQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCP------GTDQGNNLSSNFCLR 495
K K C+ CG + H++ DCP G SS C +
Sbjct: 10 KDTKTCYRCGQ-------------------AGHISRDCPTGGDQGPRQGGGGGSSAECYK 50
Query: 496 CGDSGHDLSSCE----------GEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVS 543
CG+ GH +C+ + + + CY C GHL CVN +
Sbjct: 51 CGEVGHIARNCQKGGNSYGGGYNSGYGGNFNQKTCYSCGGMGHLSRDCVNGN-------K 103
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
CYNCG SGHL EC E+ G+K ICYKC + GH +C
Sbjct: 104 CYNCGVSGHLSRECPK--ESTGGEK---ICYKCQQSGHVQSQC 141
>gi|302142593|emb|CBI19796.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 77/219 (35%), Gaps = 45/219 (20%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
++P +F N C+NC H A+ C Q C+ C H NC C
Sbjct: 54 CKRPGHFARECPNVAICNNCNLPGHIASECTTQSL---CWNCREPGHMASNCPNEGICHS 110
Query: 469 NKGSEHLASDCP--GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ------- 519
+ H A DCP G G+ C C GH + C + + +K
Sbjct: 111 CNKTGHRARDCPTPGLPSGD---LRLCNNCYKQGHIAADCTNDKACKNCRKTGHIARDCQ 167
Query: 520 ----CYICKSFGHLC--CVNSSIIG----------LKQVSCYNCGQSGHLGPECANSCEA 563
C +C GH+ C + I G + V C +C Q GH+ +C
Sbjct: 168 NEPVCNLCNIAGHVARQCPKAEIFGERGGGGRNTGFRDVICRSCNQVGHMSRDCM----- 222
Query: 564 LNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDLLFT 602
S +IC CG GH A C S R DL+
Sbjct: 223 ----VSLVICNNCGGRGHMAFECPSG-----RFMDLVIC 252
>gi|388524679|gb|AFK50258.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 141
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG 587
H+ S G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 20 HIMMQKGSFKGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCT 71
Query: 588 ---SNFKDRLRISD 598
+NF ++ S+
Sbjct: 72 ERQANFLGKIWPSN 85
>gi|114842031|dbj|BAF32453.1| Gag [Human immunodeficiency virus 1]
gi|114842041|dbj|BAF32462.1| Gag [Human immunodeficiency virus 1]
gi|114842051|dbj|BAF32471.1| Gag [Human immunodeficiency virus 1]
gi|114842061|dbj|BAF32480.1| Gag [Human immunodeficiency virus 1]
gi|114842071|dbj|BAF32489.1| Gag [Human immunodeficiency virus 1]
gi|114842081|dbj|BAF32498.1| Gag [Human immunodeficiency virus 1]
gi|114842091|dbj|BAF32507.1| Gag [Human immunodeficiency virus 1]
gi|114842101|dbj|BAF32516.1| Gag [Human immunodeficiency virus 1]
gi|114842111|dbj|BAF32525.1| Gag [Human immunodeficiency virus 1]
gi|114842121|dbj|BAF32534.1| Gag [Human immunodeficiency virus 1]
gi|114842131|dbj|BAF32543.1| Gag [Human immunodeficiency virus 1]
gi|114842141|dbj|BAF32552.1| Gag [Human immunodeficiency virus 1]
Length = 493
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C + NF +
Sbjct: 380 GQKRIKCFNCGKEGHL----AKNCRAPRRKG----CWKCGKEGHQMRDCTTERQVNFLGK 431
Query: 594 LRISD 598
+ S+
Sbjct: 432 IWPSN 436
>gi|190345729|gb|EDK37659.2| hypothetical protein PGUG_01757 [Meyerozyma guilliermondii ATCC
6260]
Length = 352
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 69/206 (33%), Gaps = 59/206 (28%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C+NC + H A CK C CG +H + CP T
Sbjct: 125 CANCHRRGHIRAKCKTVV----CHKCGVV------------------GDHYETQCPTT-- 160
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH-----LCCVNSSIIG- 538
C RCG GH + C + K+ C C +F H S + G
Sbjct: 161 ------MVCSRCGQKGHMAAGCTNKAK----KRQYCKTCDTFSHGDDRCPSIWRSYLTGT 210
Query: 539 --------LKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNF 590
L QV CYNCG H G EC E + N I + R + +
Sbjct: 211 TDAPVSNTLPQVYCYNCGSDVHYGDECP---EPRTSRVPN-ITGTAFSGSNLPRHLRAKY 266
Query: 591 KDRLRISD-------LLFTAERPPTR 609
DR+R + F ++PP+R
Sbjct: 267 FDRIRGARPRPSRGVAHFAPQKPPSR 292
>gi|428162034|gb|EKX31242.1| hypothetical protein GUITHDRAFT_52883, partial [Guillardia theta
CCMP2712]
gi|428163073|gb|EKX32165.1| hypothetical protein GUITHDRAFT_62571, partial [Guillardia theta
CCMP2712]
Length = 73
Score = 46.6 bits (109), Expect = 0.042, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 544 CYNCGQSGHLGPEC-ANSCEALNG---KKSNLICYKCGKEGHFARRCGSNFKDR 593
CY+CG+ GH+ PEC NS A++ + C++CGK GHFA C +N + R
Sbjct: 1 CYHCGRWGHIAPECWTNSRYAVSEWSVTSNRRTCFQCGKTGHFASECYANKRRR 54
Score = 45.8 bits (107), Expect = 0.074, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 520 CYICKSFGHL---CCVNSSI------IGLKQVSCYNCGQSGHLGPEC-ANSCEALNGKKS 569
CY C +GH+ C NS + + +C+ CG++GH EC AN +
Sbjct: 1 CYHCGRWGHIAPECWTNSRYAVSEWSVTSNRRTCFQCGKTGHFASECYANK----RRRTE 56
Query: 570 NLICYKCGKEGHFARRC 586
+ C+ CGK GHFA C
Sbjct: 57 TVECFNCGKPGHFASEC 73
>gi|317138215|ref|XP_001816756.2| zinc knuckle transcription factor (CnjB) [Aspergillus oryzae RIB40]
Length = 484
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 59/158 (37%), Gaps = 25/158 (15%)
Query: 425 CSNCGKENHTAATCK-----MQKQNKPCFLCGSFKHRWKNCKQGQ----DCFINKGSEHL 475
CSNCG+ HTA CK ++ C C + HR ++C + + C SEH
Sbjct: 278 CSNCGEMGHTARGCKEEHVVHERVEVKCVNCSAVGHRARDCTEPRRDRFACRNCGSSEHK 337
Query: 476 ASDCP-------------GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYI 522
A++CP D + C CG H C+ D+ + C
Sbjct: 338 AAECPNPRSAEGVEFGHFAKDCPQAPAPRTCRNCGSEDHIARDCD---KPRDISTVTCRN 394
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANS 560
C GH +V C NCG+ GH C ++
Sbjct: 395 CDEVGHFSRDCPKKKDWSKVKCNNCGEMGHTVKRCPSA 432
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 12/105 (11%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGH 552
C CG+ GH C+ E+ + +++C C + GH + + + +C NCG S H
Sbjct: 278 CSNCGEMGHTARGCKEEHVVHERVEVKCVNCSAVGHR-ARDCTEPRRDRFACRNCGSSEH 336
Query: 553 LGPECANSCEALNGKKSNL-----------ICYKCGKEGHFARRC 586
EC N A + + C CG E H AR C
Sbjct: 337 KAAECPNPRSAEGVEFGHFAKDCPQAPAPRTCRNCGSEDHIARDC 381
>gi|299929849|gb|ADJ58132.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 19/104 (18%)
Query: 503 LSSCEGEYHADDLKKIQCYICKSFGHLCCVN-----SSIIGLKQVSCYNCGQSGHLGPEC 557
+++C+G ++ + ++ H+ VN + G K++ C+NCG+ GHL
Sbjct: 347 MTACQGVGGPSHKARV---LAEAMSHVQPVNIMMQRGNFKGQKRIKCFNCGKEGHL---- 399
Query: 558 ANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRISD 598
A +C A K C+KCGKEGH + C +NF ++ S+
Sbjct: 400 ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKIWPSN 439
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|336266584|ref|XP_003348059.1| hypothetical protein SMAC_03905 [Sordaria macrospora k-hell]
gi|380090993|emb|CCC11199.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 775
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 49/133 (36%), Gaps = 22/133 (16%)
Query: 438 CKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCG 497
C ++ C C S+ H C + +EH CP + C C
Sbjct: 448 CGLEHNQLFCVECASYSHGSSQCPLLTCRWCRAVAEHPYYACP--------TRRRCTECR 499
Query: 498 DSGHDLSSCEGEYHADDLKKIQCYICKSFGHL--CCV-----------NSSIIGLKQVSC 544
GHD SC E A ++ C IC S HL CV SS + V C
Sbjct: 500 QLGHDAESCT-ERLALPRDQMDCAICGSTDHLEETCVELWRTYKPDPLTSSKVKALPVYC 558
Query: 545 YNCGQSGHLGPEC 557
Y CG +GH G +C
Sbjct: 559 YCCGNAGHYGADC 571
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 23/121 (19%)
Query: 492 FCLRCGDSGHDLSSC------------EGEYHADDLKKIQCYICKSFGHLC--CVNSSII 537
FC+ C H S C E Y+A ++ +C C+ GH C +
Sbjct: 456 FCVECASYSHGSSQCPLLTCRWCRAVAEHPYYACPTRR-RCTECRQLGHDAESCTERLAL 514
Query: 538 GLKQVSCYNCGQSGHLGPECA--------NSCEALNGKKSNLICYKCGKEGHFARRCGSN 589
Q+ C CG + HL C + + K + CY CG GH+ CG N
Sbjct: 515 PRDQMDCAICGSTDHLEETCVELWRTYKPDPLTSSKVKALPVYCYCCGNAGHYGADCGMN 574
Query: 590 F 590
Sbjct: 575 M 575
>gi|281331917|emb|CAY83136.1| gag polyprotein [Human immunodeficiency virus 1]
Length = 500
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANF 431
Query: 591 KDRLRISD 598
++ S+
Sbjct: 432 LGKIWPSN 439
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGK 434
>gi|238734330|gb|ACR55547.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 11/60 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 386 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 437
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 436
>gi|195954549|gb|ACG58967.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 11/60 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 386 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANFLGRI 437
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCSERQANFLGR 436
>gi|37682742|gb|AAQ98331.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 496
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 371 AHIMMQRGNFKGQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 422
Query: 587 G---SNFKDRLRISD 598
+NF ++ S+
Sbjct: 423 TERQANFLGKIWPSN 437
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCG+E H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 388 CFNCGREGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 432
>gi|299929809|gb|ADJ58112.1| gag protein [Human immunodeficiency virus 1]
gi|299930115|gb|ADJ58265.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHHMKDCTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|156848103|ref|XP_001646934.1| hypothetical protein Kpol_2000p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156117616|gb|EDO19076.1| hypothetical protein Kpol_2000p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 158
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 23/150 (15%)
Query: 419 GWNSE-TCSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHL 475
G +SE C NC + H + C M + ++K C+ CG H C Q C+ + H+
Sbjct: 18 GCDSEKLCYNCNQPGHVQSECTMARTVEHKQCYNCGETGHVKTECTI-QRCYNCNQTGHI 76
Query: 476 ASDCPGTDQGNNLSSN------FCLRCGDSGHDLSSCEGEYHADDLKKI--QCYICKSFG 527
+ +CP +G S+ C CG H A D + +CY C FG
Sbjct: 77 SRECPEPKKGRFSGSSKPNPRVACYNCGGPNHM---------AKDCLQTGSKCYSCGKFG 127
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
HL G + CYNC Q+GH+ EC
Sbjct: 128 HL--SKDCPSGAGEKVCYNCNQTGHISREC 155
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 445 KPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLS 504
K C++CG H + C + C+ H+ S+C + C CG++GH +
Sbjct: 4 KACYICGKLGHLAEGCDSEKLCYNCNQPGHVQSEC---TMARTVEHKQCYNCGETGHVKT 60
Query: 505 SCEGEYHADDLKKIQ-CYICKSFGHLC--C-------VNSSIIGLKQVSCYNCGQSGHLG 554
C IQ CY C GH+ C + S +V+CYNCG H+
Sbjct: 61 EC----------TIQRCYNCNQTGHISRECPEPKKGRFSGSSKPNPRVACYNCGGPNHMA 110
Query: 555 PECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRL 594
+C + G K CY CGK GH ++ C S +++
Sbjct: 111 KDCLQT-----GSK----CYSCGKFGHLSKDCPSGAGEKV 141
>gi|407044490|gb|EKE42624.1| zinc finger protein, putative [Entamoeba nuttalli P19]
Length = 389
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 493 CLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQ 549
C+ CG+ GH C + E D C+IC GH+ C N+ + C+ CG+
Sbjct: 269 CIICGEIGHTSKDCPQNENKGSDC----CFICGETGHISKDCPNA------ERKCFVCGK 318
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+GH +C + K +N C+ CG+ GH R C
Sbjct: 319 TGHKSRDCPKA------KGNNRPCFICGEIGHLDRDC 349
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 40/116 (34%)
Query: 447 CFLCGSFKHRWKNCKQGQD-----CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGH 501
C +CG H K+C Q ++ CFI + H++ DCP ++ C CG +GH
Sbjct: 269 CIICGEIGHTSKDCPQNENKGSDCCFICGETGHISKDCPNAERK-------CFVCGKTGH 321
Query: 502 DLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
C K+ G+ C+ CG+ GHL +C
Sbjct: 322 KSRDCP----------------KAKGN------------NRPCFICGEIGHLDRDC 349
>gi|259128714|gb|ACV95064.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 424
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C +NF ++
Sbjct: 311 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMRDCTERQANFLGKI 362
Query: 595 RIS 597
S
Sbjct: 363 WPS 365
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ ++C + Q F+ K
Sbjct: 317 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMRDCTERQANFLGK 361
>gi|357467429|ref|XP_003603999.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355493047|gb|AES74250.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|388502654|gb|AFK39393.1| unknown [Medicago truncatula]
Length = 269
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 77/224 (34%), Gaps = 53/224 (23%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
++P ++ N C NCG H A+ C + C+ C H NC C
Sbjct: 56 CKRPGHYARECPNVAVCHNCGLPGHIASECSTKSV---CWNCKESGHMASNCPNEGICHT 112
Query: 469 NKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ------- 519
+ H A +C P G+ C C GH + C E ++ +K
Sbjct: 113 CGKTGHRARECSAPSLPPGD---LRLCHNCYKQGHIAAECTNEKACNNCRKTGHLARDCP 169
Query: 520 ----CYICKSFGHLC--CVNSSIIG----------------------LKQVSCYNCGQSG 551
C +C GHL C S +IG + V C NC Q G
Sbjct: 170 NDPICNVCNVSGHLARQCPKSDVIGDHRGRGSFRGAGGGVAAGGGGGYRDVVCRNCQQFG 229
Query: 552 HLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN-FKDRL 594
H+ +C +IC+ CG GH A C S F DR
Sbjct: 230 HMSRDCMGP---------LMICHNCGGRGHLAYECPSGRFVDRY 264
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 59/172 (34%), Gaps = 47/172 (27%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C NC + H A C C CG H C C+ K S H+AS+CP
Sbjct: 53 CKNCKRPGHYARECPNVAV---CHNCGLPGHIASECSTKSVCWNCKESGHMASNCP---- 105
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEG-EYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVS 543
+ C CG +GH C DL+
Sbjct: 106 ----NEGICHTCGKTGHRARECSAPSLPPGDLRL-------------------------- 135
Query: 544 CYNCGQSGHLGPECANSCEALNGKKS---------NLICYKCGKEGHFARRC 586
C+NC + GH+ EC N N +K+ + IC C GH AR+C
Sbjct: 136 CHNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNVCNVSGHLARQC 187
>gi|259127828|gb|ACV94705.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A SC A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARSCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A +C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARSCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|117581762|gb|ABK41297.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 8/49 (16%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G K++ C+NCG+ GHL A +C A K C+KCGKEGH R C
Sbjct: 384 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMRDC 424
>gi|87131046|gb|ABD24127.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 383 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLGRI 434
Query: 595 RIS 597
S
Sbjct: 435 WPS 437
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ +
Sbjct: 389 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGR 433
>gi|119710445|gb|ABL96419.1| gag-pol fusion protein [Human immunodeficiency virus 1]
Length = 275
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCGKEGH + C + R DL
Sbjct: 55 KTVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGKEGHQIKDCTERQANFFR-EDL 105
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P AR F +N G GR+N+ E G
Sbjct: 106 AF----PQGEAREFSSEQTRANSPTRGELQVWGRDNNSVTEAG 144
>gi|299930375|gb|ADJ58395.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|119710431|gb|ABL96412.1| gag-pol fusion protein [Human immunodeficiency virus 1]
Length = 275
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCGKEGH + C + R DL
Sbjct: 55 KTVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGKEGHQIKDCTERQANFFR-EDL 105
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P AR F +N G GR+N+ E G
Sbjct: 106 AF----PQGEAREFSSEQTRANSPTRGELQVWGRDNNSVTEAG 144
>gi|259126756|gb|ACV94283.1| gag protein [Human immunodeficiency virus 1]
gi|259126781|gb|ACV94294.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|259126754|gb|ACV94282.1| gag protein [Human immunodeficiency virus 1]
gi|259126774|gb|ACV94291.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|124389810|gb|ABN11087.1| gag protein [Human immunodeficiency virus 1]
Length = 248
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 535 SIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFK 591
+I G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 139 NIKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFL 190
Query: 592 DRLRISD 598
R+ S
Sbjct: 191 GRMWPSS 197
>gi|281331893|emb|CAY83099.1| gag polyprotein [Human immunodeficiency virus 1]
Length = 497
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFXGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRIS 597
++ S
Sbjct: 432 LGKIWPS 438
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|21537255|gb|AAM61596.1| DNA-binding protein [Arabidopsis thaliana]
Length = 254
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 74/189 (39%), Gaps = 51/189 (26%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
++P +F N C+NCG H AA C + R NC++
Sbjct: 57 CKRPGHFARDCSNVSVCNNCGLPGHIAAECTAES-------------RCWNCRE------ 97
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFG 527
H+AS+C +++G C CG SGH C + A DL+ C C G
Sbjct: 98 ---PGHVASNC--SNEG------ICHSCGKSGHRARDCSNSDSRAGDLR--LCNNCFKQG 144
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC- 586
HL + +C NC SGH+ +C N + +C C GH AR C
Sbjct: 145 HL-----AADCTNDKACKNCRTSGHIARDCRN----------DPVCNICSISGHVARHCP 189
Query: 587 --GSNFKDR 593
SN+ DR
Sbjct: 190 KGDSNYSDR 198
>gi|18410883|ref|NP_565112.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|145327705|ref|NP_001077828.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|26451654|dbj|BAC42924.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|28973609|gb|AAO64129.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|51968528|dbj|BAD42956.1| DNA-binding protein [Arabidopsis thaliana]
gi|51968680|dbj|BAD43032.1| DNA-binding protein [Arabidopsis thaliana]
gi|51968750|dbj|BAD43067.1| DNA-binding protein [Arabidopsis thaliana]
gi|51969824|dbj|BAD43604.1| DNA-binding protein [Arabidopsis thaliana]
gi|51970558|dbj|BAD43971.1| DNA-binding protein [Arabidopsis thaliana]
gi|51971174|dbj|BAD44279.1| DNA-binding protein [Arabidopsis thaliana]
gi|51971429|dbj|BAD44379.1| DNA-binding protein [Arabidopsis thaliana]
gi|51971449|dbj|BAD44389.1| DNA-binding protein [Arabidopsis thaliana]
gi|332197612|gb|AEE35733.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|332197613|gb|AEE35734.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
Length = 257
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 74/189 (39%), Gaps = 51/189 (26%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
++P +F N C+NCG H AA C + R NC++
Sbjct: 60 CKRPGHFARDCSNVSVCNNCGLPGHIAAECTAES-------------RCWNCRE------ 100
Query: 469 NKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCE-GEYHADDLKKIQCYICKSFG 527
H+AS+C +++G C CG SGH C + A DL+ C C G
Sbjct: 101 ---PGHVASNC--SNEG------ICHSCGKSGHRARDCSNSDSRAGDLR--LCNNCFKQG 147
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC- 586
HL + +C NC SGH+ +C N + +C C GH AR C
Sbjct: 148 HL-----AADCTNDKACKNCRTSGHIARDCRN----------DPVCNICSISGHVARHCP 192
Query: 587 --GSNFKDR 593
SN+ DR
Sbjct: 193 KGDSNYSDR 201
>gi|259125587|gb|ACV93843.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A SC A K C+KCGKEGH + C +NF ++
Sbjct: 384 GRKRIKCFNCGKEGHL----ARSCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 435
Query: 595 RISD 598
S
Sbjct: 436 WPSS 439
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A +C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARSCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|25167021|gb|AAN73790.1|AF484517_1 gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 1434
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 13/76 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRIS 597
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C + R
Sbjct: 382 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFFR-E 432
Query: 598 DLLFTAERPPTRARHF 613
+L F P +AR F
Sbjct: 433 NLAF----PQGKAREF 444
>gi|407734094|gb|AFU27729.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANF 431
Query: 591 KDRLRISD 598
++ S+
Sbjct: 432 LGKIWPSN 439
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGK 434
>gi|407734102|gb|AFU27736.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANF 431
Query: 591 KDRLRISD 598
++ S+
Sbjct: 432 LGKIWPSN 439
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGK 434
>gi|227057850|gb|ACP18904.1| gag protein [Human immunodeficiency virus 1]
Length = 505
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G++ S+ G K++ C+NCG+ GHL A +C A K C+KCG+EGH + C
Sbjct: 370 GNILMQRSNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGQEGHQMKDC 421
Query: 587 G---SNFKDRLRIS 597
+NF ++ S
Sbjct: 422 TERQANFLGKIWPS 435
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 387 CFNCGKEGHLARNCRAPRK-KGCWKCGQEGHQMKDCTERQANFLGK 431
>gi|119710437|gb|ABL96415.1| gag-pol fusion protein [Human immunodeficiency virus 1]
Length = 275
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K V C+NCG+ GH+ A +C A K C+KCGKEGH + C + R DL
Sbjct: 55 KTVKCFNCGKEGHI----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFFR-EDL 105
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P AR F +N G GR+N+ E G
Sbjct: 106 AF----PQGEAREFPSEQTRANSPTRGELQVWGRDNNSIAEAG 144
>gi|326476591|gb|EGE00601.1| zinc knuckle domain-containing protein [Trichophyton tonsurans CBS
112818]
gi|326483934|gb|EGE07944.1| zinc knuckle domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 208
Score = 46.2 bits (108), Expect = 0.049, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 66/181 (36%), Gaps = 36/181 (19%)
Query: 417 PPGWNSETCSNCGKENHTAATCKMQK-----QNKPCFLCGSFKHRWKNCKQGQDCFINKG 471
P ++ C +C H A C + N C+ C H +NC G I +
Sbjct: 13 PRTTETKQCYHCQGLGHVQADCPTLRLNGGASNARCYSCNLPGHLARNCPSGG---IQQQ 69
Query: 472 SEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCC 531
+ + T G N R G +G+ ++ CY C H
Sbjct: 70 NPQAVRNAGSTRGGFNAG----FRGGPAGYPRAA-------------TCYKCGGPNHF-- 110
Query: 532 VNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNG---KKSNLICYKCGKEGHFARRCGS 588
+ + + CY CG+ GH+ + C A NG +CYKC + GH +R C +
Sbjct: 111 --ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLSSVGKVCYKCSQAGHISRDCPT 164
Query: 589 N 589
N
Sbjct: 165 N 165
>gi|300720462|gb|ADK33280.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH+ S+ G + V C+NCG+ GH+ A +C A + C+KCGKEGH + C
Sbjct: 370 GHIMMQKSNFKGKRIVKCFNCGKEGHI----ARNCRAPRKRG----CWKCGKEGHQMKDC 421
Query: 587 G---SNFKDRLRIS 597
+NF ++ S
Sbjct: 422 TERQANFLGKIWPS 435
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ + C+ CG H+ K+C + Q F+ K
Sbjct: 387 CFNCGKEGHIARNCRAPRK-RGCWKCGKEGHQMKDCTERQANFLGK 431
>gi|407741665|gb|AFU34051.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG 587
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 374 HVMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCT 425
Query: 588 ---SNFKDRLRISD 598
+NF ++ S+
Sbjct: 426 ERQANFLGKIWPSN 439
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|407734086|gb|AFU27722.1| gag protein [Human immunodeficiency virus 1]
gi|407734110|gb|AFU27743.1| gag protein [Human immunodeficiency virus 1]
gi|407734118|gb|AFU27750.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANF 431
Query: 591 KDRLRISD 598
++ S+
Sbjct: 432 LGKIWPSN 439
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGK 434
>gi|224986262|gb|ACN74832.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRISD 598
++ S+
Sbjct: 432 LGKIWPSN 439
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|149392141|emb|CAM35540.2| gag protein [Small ruminant lentivirus]
Length = 241
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 10/53 (18%)
Query: 541 QVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
Q CYNCG+ GHL +C + +IC++CGK+GH R C +R
Sbjct: 176 QQKCYNCGKIGHLARQC----------RQGIICHRCGKKGHMQRDCRQKXNER 218
>gi|374350433|gb|AEZ35914.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|299929995|gb|ADJ58205.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|46946985|gb|AAT06723.1| gag protein [Human immunodeficiency virus 1]
Length = 349
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 12/64 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC----GSNFKDR 593
G K++ C+NCG+ GHL A +C+A K C+KCGKEGH + C G NF +
Sbjct: 234 GQKRIKCFNCGKEGHL----ARNCKAPRKKG----CWKCGKEGHQMKDCTERQGRNFLGK 285
Query: 594 LRIS 597
S
Sbjct: 286 FWPS 289
>gi|326417111|gb|ADZ73397.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|374429905|gb|AEZ51207.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 11/67 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS---NF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C NF
Sbjct: 380 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQVNF 431
Query: 591 KDRLRIS 597
+L S
Sbjct: 432 LGKLWPS 438
>gi|254667205|gb|ACT76559.1| gag protein [Human immunodeficiency virus 1]
Length = 166
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 52 GQKRIKCFNCGKEGHL----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 103
Query: 595 RISD 598
S+
Sbjct: 104 WPSN 107
>gi|281331916|emb|CAY83134.1| gag-pol fusion polyprotein precursor [Human immunodeficiency virus
1]
Length = 1435
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDR 593
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +
Sbjct: 380 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCSERQANF 431
Query: 594 LR 595
LR
Sbjct: 432 LR 433
>gi|407739649|gb|AFU32395.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 381 SNFKGQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 432
Query: 591 KDRLRISD 598
++ S+
Sbjct: 433 LGKIWPSN 440
>gi|365761736|gb|EHN03373.1| Air2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 374
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 30/128 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C C H K+C + +H + CP + C +C + GH S C
Sbjct: 93 CNNCSQRGHLXKDCPHIICSYCGSTDDHYSQHCPKAIK--------CSKCDEVGHYRSQC 144
Query: 507 EGEYHADDLKKIQCYICKSFGHL---C--------------CVNSSIIGLKQVSCYNCGQ 549
++ KK+QC +CKS H C ++ + CYNCG+
Sbjct: 145 PHKW-----KKVQCSLCKSKKHSKERCPSIWRAYILIDDDQMAKPKVLPFHTIYCYNCGE 199
Query: 550 SGHLGPEC 557
GH G +C
Sbjct: 200 KGHFGDDC 207
>gi|407733789|gb|AFU27465.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 370 AHIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 421
Query: 587 G---SNFKDR 593
+NF R
Sbjct: 422 TERQANFLGR 431
>gi|259126529|gb|ACV94235.1| gag protein [Human immunodeficiency virus 1]
gi|259126562|gb|ACV94250.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 385 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 436
Query: 595 RISD 598
S+
Sbjct: 437 WPSN 440
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 391 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 435
>gi|209576091|gb|ACI64015.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 19 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 70
Query: 591 KDRLRISD 598
RL S
Sbjct: 71 LGRLWPSS 78
>gi|407735173|gb|AFU28647.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 373 AHIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 424
Query: 587 G---SNFKDRLRIS 597
+NF ++ S
Sbjct: 425 TERQANFLGKIWPS 438
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|254667208|gb|ACT76561.1| gag protein [Human immunodeficiency virus 1]
Length = 166
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 52 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 103
Query: 595 RISD 598
S+
Sbjct: 104 WPSN 107
>gi|299930001|gb|ADJ58208.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKKIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|299929891|gb|ADJ58153.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKKIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RISD 598
S+
Sbjct: 436 WPSN 439
>gi|429848776|gb|ELA24219.1| zinc knuckle domain containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 220
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 67/193 (34%), Gaps = 43/193 (22%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG H A C + + C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGNVGHYAEVCSSAE--RLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE----------------------YHADDLK 516
CP +S C CG GH +C A +
Sbjct: 66 CPTLRLSGAGTSGRCYNCGQPGHLARACPNPAGVGIGRGAPVPRGAFGGYGRGGFAGGPR 125
Query: 517 KIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---IC 573
CY C H + + + CY CG+ GH+ C A NG N C
Sbjct: 126 PATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------CTAPNGGPLNTAGKTC 174
Query: 574 YKCGKEGHFARRC 586
Y+CG+ GH +R C
Sbjct: 175 YQCGEAGHISRDC 187
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 52/144 (36%), Gaps = 46/144 (31%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEG-------------EYHADDLKKI----QCYICKSFGH 528
++LS C +CG+ GH C E + L + QCY C+ GH
Sbjct: 2 SSLSRRACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGH 61
Query: 529 LCCVNSSIIGLKQVS------CYNCGQSGHLGPECANSCEALNGKKSNL----------- 571
V + L+ CYNCGQ GHL C N G+ + +
Sbjct: 62 ---VQADCPTLRLSGAGTSGRCYNCGQPGHLARACPNPAGVGIGRGAPVPRGAFGGYGRG 118
Query: 572 ---------ICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 119 GFAGGPRPATCYKCGGPNHFARDC 142
>gi|50290839|ref|XP_447852.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527163|emb|CAG60801.1| unnamed protein product [Candida glabrata]
Length = 427
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 52/148 (35%), Gaps = 50/148 (33%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
CSNC + H C + C CG +H + CP T +
Sbjct: 53 CSNCSETGHFKRDCP----HVICSYCGVM------------------DDHYSQQCPTTMR 90
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCV--------- 532
C C +SGH C ++ KK+ C +C S HL C
Sbjct: 91 --------CALCNESGHYRMHCPLKW-----KKLNCTLCNSPKHLRNRCPSVWRVYLLKN 137
Query: 533 ---NSSIIGLKQVSCYNCGQSGHLGPEC 557
++ + Q+ CYNCG GH G EC
Sbjct: 138 EDNKRKVLPMHQIYCYNCGDKGHYGDEC 165
>gi|407732455|gb|AFU26355.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 379 SNFKGQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 430
Query: 591 KDRLRISD 598
++ S+
Sbjct: 431 LGKIWPSN 438
>gi|190406294|gb|EDV09561.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|207344349|gb|EDZ71522.1| YIL079Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273738|gb|EEU08664.1| Air1p [Saccharomyces cerevisiae JAY291]
gi|323333153|gb|EGA74553.1| Air1p [Saccharomyces cerevisiae AWRI796]
gi|323337177|gb|EGA78431.1| Air1p [Saccharomyces cerevisiae Vin13]
gi|323354583|gb|EGA86419.1| Air1p [Saccharomyces cerevisiae VL3]
gi|392298837|gb|EIW09933.1| Air1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 360
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 57/163 (34%), Gaps = 30/163 (18%)
Query: 405 LRMLLRKPRYFDPPGWNSE--------TCSNCGKENHTAATCKMQKQNKPCFLCGSFK-H 455
LR L + RYF ++S C+NC + H C + C CG H
Sbjct: 48 LRTLRGQGRYFGITDYDSNGAIMEAEPKCNNCSQRGHLKRNCP----HVICTYCGFMDDH 103
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
++C + C + H S CP + FC C H C + + L
Sbjct: 104 YSQHCPKAIICTNCNANGHYKSQCP-----HKWKKVFCTLCNSKRHSRERCPSIWRSYLL 158
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
K N + V CYNCG +GH G +CA
Sbjct: 159 KTKD------------TNQGDFDFQTVFCYNCGNAGHFGDDCA 189
>gi|389624465|ref|XP_003709886.1| hypothetical protein MGG_09256 [Magnaporthe oryzae 70-15]
gi|351649415|gb|EHA57274.1| hypothetical protein MGG_09256 [Magnaporthe oryzae 70-15]
gi|440472467|gb|ELQ41325.1| hypothetical protein OOU_Y34scaffold00283g18 [Magnaporthe oryzae
Y34]
gi|440483150|gb|ELQ63582.1| hypothetical protein OOW_P131scaffold00971g7 [Magnaporthe oryzae
P131]
Length = 695
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 51/134 (38%), Gaps = 29/134 (21%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
C I + H A+DCP C C + H + C K+++C C+
Sbjct: 401 CVICAKNGHRANDCPPP---------TCRHCQNQDHTSAQCP--------KRVRCTKCQH 443
Query: 526 FGHL--CCVN--SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI--------C 573
GH+ C +S G ++ C C + HL +C + N++ C
Sbjct: 444 LGHIKKSCPEKLASAAGEAELECAVCCATDHLEDDCESLWCTYYPDPENIVKVQSIPAFC 503
Query: 574 YKCGKEGHFARRCG 587
Y CG + HF CG
Sbjct: 504 YSCGADNHFGGDCG 517
>gi|116197647|ref|XP_001224635.1| hypothetical protein CHGG_06979 [Chaetomium globosum CBS 148.51]
gi|88178258|gb|EAQ85726.1| hypothetical protein CHGG_06979 [Chaetomium globosum CBS 148.51]
Length = 446
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 62/186 (33%), Gaps = 47/186 (25%)
Query: 400 KYNVVLRMLLRKPRYFDPPGWNSET--------------------CSNCGKENHTAATCK 439
KY V R PR D W + CSNC H + +C
Sbjct: 226 KYTVTYRFQWNPPRPRDRELWPKDVNENIERLSDAGEVVYGGLPKCSNCDGLGHISKSCP 285
Query: 440 MQKQNKP------CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFC 493
K K CF C HR ++ S H + DCP QG + C
Sbjct: 286 QDKVEKANTFEILCFNCNEPGHRVRD------------SGHFSRDCP---QG---GPSGC 327
Query: 494 LRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHL 553
CG GH C ++ +QC C FGH+ + +V C NC + GH
Sbjct: 328 RNCGQEGHMSRDCT---EPRNMALVQCRNCDEFGHMNKECPKPRDMARVKCANCQEMGHY 384
Query: 554 GPECAN 559
C N
Sbjct: 385 KSRCPN 390
>gi|307206122|gb|EFN84202.1| Zinc finger CCHC domain-containing protein 9 [Harpegnathos
saltator]
Length = 404
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADD-LKKIQCYICK 524
CF + S H+ SDCP + C +CG + H C + H D K +C+IC+
Sbjct: 286 CFNCRKSGHVLSDCPELGGREEAGTGICFKCGSTEHTHFEC--KVHKDSTYKYAKCFICR 343
Query: 525 SFGHL---CCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLI 572
GH+ C N + C CG HL +C + + K+ N+I
Sbjct: 344 EQGHISSQCPDNPKGVYPDGGCCKICGAVTHLKKDCP---DLIKTKEDNII 391
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 12/94 (12%)
Query: 425 CSNCGKENHTAATC-----KMQKQNKPCFLCGSFKHRWKNCKQGQD-------CFINKGS 472
C NC K H + C + + CF CGS +H CK +D CFI +
Sbjct: 286 CFNCRKSGHVLSDCPELGGREEAGTGICFKCGSTEHTHFECKVHKDSTYKYAKCFICREQ 345
Query: 473 EHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
H++S CP +G C CG H C
Sbjct: 346 GHISSQCPDNPKGVYPDGGCCKICGAVTHLKKDC 379
>gi|294943015|ref|XP_002783737.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239896385|gb|EER15533.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 110
Score = 46.2 bits (108), Expect = 0.058, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 18/97 (18%)
Query: 422 SETCSNCGKENHTAATCKMQ--------KQNKPCFLCGSFKHRWKNCKQGQD----CFIN 469
S+ C C + H A C Q ++ + C+ CG H ++C + Q CF
Sbjct: 7 SQACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDRPCFKC 66
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
+ H A DCP D N C RCG SGH C
Sbjct: 67 QQVGHFARDCPSADTRN------CFRCGQSGHLAREC 97
Score = 45.1 bits (105), Expect = 0.13, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 412 PRYFDPPGW---NSETCSNCGKENHTAATC-KMQKQNKPCFLCGSFKHRWKNCKQG--QD 465
PR FD + C NCG+ +H A C K Q ++PCF C H ++C ++
Sbjct: 24 PRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDRPCFKCQQVGHFARDCPSADTRN 83
Query: 466 CFINKGSEHLASDCP 480
CF S HLA +CP
Sbjct: 84 CFRCGQSGHLARECP 98
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 18/103 (17%)
Query: 490 SNFCLRCGDSGHDLSSCEGEYHADDLKKIQ---CYICKSFGHL---CCVNSSIIGLKQVS 543
S C C ++GH +C ++ D + + CY C HL C + S
Sbjct: 7 SQACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQS----NDRP 62
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
C+ C Q GH +C S + N C++CG+ GH AR C
Sbjct: 63 CFKCQQVGHFARDCP-SADTRN-------CFRCGQSGHLAREC 97
Score = 41.6 bits (96), Expect = 1.4, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 12/75 (16%)
Query: 520 CYICKSFGHLC--CV----NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLIC 573
C+IC GH C + S + +CYNCGQ HL +C + ++ C
Sbjct: 10 CFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKD------QSNDRPC 63
Query: 574 YKCGKEGHFARRCGS 588
+KC + GHFAR C S
Sbjct: 64 FKCQQVGHFARDCPS 78
Score = 41.6 bits (96), Expect = 1.4, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 36/97 (37%), Gaps = 10/97 (10%)
Query: 464 QDCFINKGSEHLASDCP---GTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
Q CFI + H A +CP D C CG H C + D C
Sbjct: 8 QACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDR----PC 63
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+ C+ GH +C+ CGQSGHL EC
Sbjct: 64 FKCQQVGHFA---RDCPSADTRNCFRCGQSGHLAREC 97
>gi|449461615|ref|XP_004148537.1| PREDICTED: DNA-binding protein HEXBP-like [Cucumis sativus]
gi|449519884|ref|XP_004166964.1| PREDICTED: DNA-binding protein HEXBP-like [Cucumis sativus]
Length = 260
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 78/222 (35%), Gaps = 51/222 (22%)
Query: 409 LRKPRYFDPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFI 468
++P +F N C NCG H A+ C + C+ C H +C C
Sbjct: 50 CKRPGHFARECPNVAICHNCGLPGHIASECTTKSL---CWNCREPGHMASSCPNEGICHT 106
Query: 469 NKGSEHLASDC--PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ------- 519
+ H A DC P G+ C C GH + C E ++ +K
Sbjct: 107 CGKAGHRARDCTAPPMPPGD---LRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCP 163
Query: 520 ----CYICKSFGHLC--CVNSSIIG--------------------LKQVSCYNCGQSGHL 553
C +C GH+ C S+++G + V C NC Q GH+
Sbjct: 164 NDPICNLCNVSGHVARQCPKSNVLGDRGDRGISSGGGSGRGSGSGYRDVVCRNCQQLGHM 223
Query: 554 GPECANSCEALNGKKSNLICYKCGKEGHFARRCGSN-FKDRL 594
+C +IC+ CG GH A C S F DR
Sbjct: 224 SRDCMGP---------LMICHNCGGRGHLAYECPSGRFMDRF 256
>gi|365765108|gb|EHN06622.1| Air1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 360
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 57/163 (34%), Gaps = 30/163 (18%)
Query: 405 LRMLLRKPRYFDPPGWNSE--------TCSNCGKENHTAATCKMQKQNKPCFLCGSFK-H 455
LR L + RYF ++S C+NC + H C + C CG H
Sbjct: 48 LRTLRGQGRYFGITDYDSNGAIMEAEPKCNNCSQRGHLKRNCP----HVICTYCGFMDDH 103
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
++C + C + H S CP + FC C H C + + L
Sbjct: 104 YSQHCPKAIICTNCNANGHYKSQCP-----HKWKKVFCTLCNSKRHSRERCPSIWRSYLL 158
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
K N + V CYNCG +GH G +CA
Sbjct: 159 KTKD------------TNQGDFDFQTVFCYNCGNAGHFGDDCA 189
>gi|315056357|ref|XP_003177553.1| hypothetical protein MGYG_01625 [Arthroderma gypseum CBS 118893]
gi|311339399|gb|EFQ98601.1| hypothetical protein MGYG_01625 [Arthroderma gypseum CBS 118893]
Length = 472
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQVSCYNCGQS 550
C CG GH + SC+ E+ + +++C CK GH C + + + +C NCG+
Sbjct: 265 CSNCGQMGHIMKSCKEEHSVVERVEVKCVNCKQPGHRARDCKEARV---DRFACRNCGKG 321
Query: 551 GHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
GH EC A + C +C + GHFA+ C
Sbjct: 322 GHRSNECTEPRSA-----EGVECKRCNEVGHFAKDC 352
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 38/167 (22%)
Query: 425 CSNCGKENHTAATCK-----MQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDC 479
CSNCG+ H +CK +++ C C HR ++CK+ +
Sbjct: 265 CSNCGQMGHIMKSCKEEHSVVERVEVKCVNCKQPGHRARDCKEAR--------------- 309
Query: 480 PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
+ C CG GH + C A+ ++C C GH G
Sbjct: 310 --------VDRFACRNCGKGGHRSNECTEPRSAEG---VECKRCNEVGHF--AKDCPQGG 356
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+C NCG H+ +C + + C+ C + GHF+R C
Sbjct: 357 GSRACRNCGSEDHMVKDCDQP-----RNMATVTCHNCEEMGHFSRDC 398
>gi|167522491|ref|XP_001745583.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775932|gb|EDQ89554.1| predicted protein [Monosiga brevicollis MX1]
Length = 231
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNC----KQGQD------CFINKGSE 473
TC C + HT TC Q CF CGS +H C GQ CFI KG
Sbjct: 69 TCFGCRQRGHTLETCPAS-QTGICFRCGSTEHTTAKCTVKVPAGQPQFPYATCFICKGKG 127
Query: 474 HLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
HL+ +CP +G C CG H C
Sbjct: 128 HLSRECPDNPKGLYPDGGGCGFCGSVEHFKRDC 160
>gi|407735330|gb|AFU28775.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NFNFKGQKKIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQAN 432
Query: 590 FKDRLRIS 597
F ++ S
Sbjct: 433 FLGKIWPS 440
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGK 436
>gi|407735073|gb|AFU28563.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQAN 432
Query: 590 FKDRLRISD 598
F ++ S
Sbjct: 433 FLGKIWPSS 441
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 436
>gi|407735063|gb|AFU28555.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQAN 432
Query: 590 FKDRLRISD 598
F ++ S
Sbjct: 433 FLGKIWPSS 441
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 436
>gi|407735305|gb|AFU28755.1| gag protein [Human immunodeficiency virus 1]
gi|407735325|gb|AFU28771.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NFNFKGQKKIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQAN 432
Query: 590 FKDRLRIS 597
F ++ S
Sbjct: 433 FLGKIWPS 440
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGK 436
>gi|257449255|gb|ACV53612.1| gag polyprotein [Caprine arthritis encephalitis virus]
Length = 442
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 10/47 (21%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
K +CYNCG+ GHL +C +S CYKCGK+GH + C
Sbjct: 378 KSQTCYNCGKPGHLARQC----------RSGKTCYKCGKKGHMQKDC 414
>gi|86753602|gb|ABD15025.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
G++ S+ G K++ C+NCG+ GHL A +C A K C+KCG+EGH + C
Sbjct: 369 GNIMMQKSNFKGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGQEGHQMKDC 420
Query: 587 G---SNFKDRLRIS 597
+NF ++ S
Sbjct: 421 TERQANFLGKIWPS 434
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 386 CFNCGKEGHLARNCRAPRK-KGCWKCGQEGHQMKDCTERQANFLGK 430
>gi|407735300|gb|AFU28751.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NFNFKGQKKIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQAN 432
Query: 590 FKDRLRIS 597
F ++ S
Sbjct: 433 FLGKIWPS 440
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGK 436
>gi|345809573|gb|AEO17491.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFKGQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRISD 598
++ S+
Sbjct: 432 LGKIWPSN 439
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCG+E H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGREGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|259147176|emb|CAY80429.1| Air1p [Saccharomyces cerevisiae EC1118]
Length = 360
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 57/163 (34%), Gaps = 30/163 (18%)
Query: 405 LRMLLRKPRYFDPPGWNSE--------TCSNCGKENHTAATCKMQKQNKPCFLCGSFK-H 455
LR L + RYF ++S C+NC + H C + C CG H
Sbjct: 48 LRTLRGQGRYFGITDYDSNGAIMEAEPKCNNCSQRGHLKRNCP----HVICTYCGFMDDH 103
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
++C + C + H S CP + FC C H C + + L
Sbjct: 104 YSQHCPKAIICTNCNANGHYKSQCP-----HKWKKVFCTLCNSKRHSRERCPSIWRSYLL 158
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
K N + V CYNCG +GH G +CA
Sbjct: 159 KTKD------------TNQGDFDFQTVFCYNCGNAGHFGDDCA 189
>gi|407735315|gb|AFU28763.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NFNFKGQKKIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQAN 432
Query: 590 FKDRLRIS 597
F ++ S
Sbjct: 433 FLGKIWPS 440
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGK 436
>gi|367007884|ref|XP_003688671.1| hypothetical protein TPHA_0P00790 [Tetrapisispora phaffii CBS 4417]
gi|357526981|emb|CCE66237.1| hypothetical protein TPHA_0P00790 [Tetrapisispora phaffii CBS 4417]
Length = 339
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 30/129 (23%)
Query: 447 CFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC 506
C C H ++C + EH + DC T FC +CG++GH + C
Sbjct: 35 CRQCRQEGHMQRDCPHTVCSYCGVLDEHASKDCKLTI--------FCKKCGETGHYFNHC 86
Query: 507 EGEYHADDLKKIQCYICKSFGHLCCVNSSI------------------IGLKQVSCYNCG 548
+ DD I C +C S H+ + SS+ + +++ CYNCG
Sbjct: 87 PLRF--DD--NIYCTVCNSNRHVEKMCSSVWRSYALRDDNTDADLGQQLDMEKFYCYNCG 142
Query: 549 QSGHLGPEC 557
SGHLG +C
Sbjct: 143 SSGHLGDDC 151
>gi|50291237|ref|XP_448051.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527362|emb|CAG61002.1| unnamed protein product [Candida glabrata]
Length = 155
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 425 CSNCGKENHTAATCKMQK--QNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGT 482
C NC + H + C M + ++K C+ CG H C Q CF + H++ +CP
Sbjct: 25 CYNCNQPGHVQSECTMPRTVEHKQCYNCGETGHVKSECSI-QRCFNCNQTGHVSRECPEP 83
Query: 483 DQG--NNLSSNF-CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGL 539
+G S N C +CG H C D K CY C FGH+ G
Sbjct: 84 RKGRFGAASKNVSCYKCGGPNHVARDCM----QTDTK---CYSCGRFGHV--SRDCPNGP 134
Query: 540 KQVSCYNCGQSGHLGPEC 557
+ CYNC ++GH+ +C
Sbjct: 135 NEKVCYNCNETGHISRDC 152
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 56/143 (39%), Gaps = 37/143 (25%)
Query: 445 KPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLS 504
K C++CG HLA DC S C C GH S
Sbjct: 4 KACYVCGKIG-------------------HLADDCD--------SERLCYNCNQPGHVQS 36
Query: 505 SCEGEYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEAL 564
C ++ QCY C GH+ S +++ C+NC Q+GH+ EC +
Sbjct: 37 ECT---MPRTVEHKQCYNCGETGHV----KSECSIQR--CFNCNQTGHVSRECPEPRKGR 87
Query: 565 NGKKS-NLICYKCGKEGHFARRC 586
G S N+ CYKCG H AR C
Sbjct: 88 FGAASKNVSCYKCGGPNHVARDC 110
>gi|264687829|gb|ACY73905.1| gag protein [Small ruminant lentivirus]
Length = 242
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 10/44 (22%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GHL +C NGK CYKCGK+GH + C
Sbjct: 206 TCYNCGKPGHLARQCR------NGK----TCYKCGKKGHMQKDC 239
>gi|254667214|gb|ACT76565.1| gag protein [Human immunodeficiency virus 1]
Length = 165
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF RL
Sbjct: 52 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGRL 103
Query: 595 RISD 598
S+
Sbjct: 104 WPSN 107
>gi|407735320|gb|AFU28767.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NFNFKGQKKIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQAN 432
Query: 590 FKDRLRIS 597
F ++ S
Sbjct: 433 FLGKIWPS 440
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGK 436
>gi|407735285|gb|AFU28739.1| gag protein [Human immunodeficiency virus 1]
gi|407735290|gb|AFU28743.1| gag protein [Human immunodeficiency virus 1]
gi|407735310|gb|AFU28759.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NFNFKGQKKIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQAN 432
Query: 590 FKDRLRIS 597
F ++ S
Sbjct: 433 FLGKIWPS 440
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGK 436
>gi|407735038|gb|AFU28535.1| gag protein [Human immunodeficiency virus 1]
gi|407735053|gb|AFU28547.1| gag protein [Human immunodeficiency virus 1]
gi|407735068|gb|AFU28559.1| gag protein [Human immunodeficiency virus 1]
gi|407735078|gb|AFU28567.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQAN 432
Query: 590 FKDRLRISD 598
F ++ S
Sbjct: 433 FLGKIWPSS 441
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 436
>gi|300720594|gb|ADK33368.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 8/53 (15%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
S+ G K+V C+NCG+ GH+ A +C A K C+KCGKEGH + C
Sbjct: 377 SNFXGTKRVKCFNCGKEGHI----ARNCRAPRKKG----CWKCGKEGHQMKDC 421
>gi|264687797|gb|ACY73889.1| gag protein [Small ruminant lentivirus]
Length = 242
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 10/47 (21%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
K +CYNCG+ GHL +C +S CYKCGK+GH + C
Sbjct: 203 KSQTCYNCGKPGHLARQC----------RSGKTCYKCGKKGHMQKDC 239
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 374 QKKRRKKTRVIEAKDKVEDARKENEAKYNV-VLRMLLRKPRYFDPPGWNSETCSNCGKEN 432
QK K + ++K++ R+ + Y + +L LR R D S+TC NCGK
Sbjct: 158 QKVLGTKAQTSTVEEKLQACREVESSTYKMQLLAQALRPAREKDT---KSQTCYNCGKPG 214
Query: 433 HTAATCKMQKQNKPCFLCGSFKHRWKNCKQG 463
H A C + K C+ CG H K+C+QG
Sbjct: 215 HLARQC---RSGKTCYKCGKKGHMQKDCRQG 242
>gi|407735083|gb|AFU28571.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQAN 432
Query: 590 FKDRLRISD 598
F ++ S
Sbjct: 433 FLGKIWPSS 441
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 436
>gi|299930393|gb|ADJ58404.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 373 AHIMMQRGNFKGQKRIKCFNCGKDGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 424
>gi|259126776|gb|ACV94292.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|407734779|gb|AFU28313.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG 587
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 374 HVMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCT 425
Query: 588 ---SNFKDRLRIS 597
+NF ++ S
Sbjct: 426 ERQANFLGKIWPS 438
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|374350392|gb|AEZ35887.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS---NF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C NF
Sbjct: 380 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQVNF 431
Query: 591 KDRLRISD 598
+L S+
Sbjct: 432 LGKLWPSN 439
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQVNFLGK 434
>gi|299930327|gb|ADJ58371.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 18/75 (24%)
Query: 533 NSSII-------GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARR 585
N+SI+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH +
Sbjct: 372 NTSIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKE 423
Query: 586 CG---SNFKDRLRIS 597
C +NF ++ S
Sbjct: 424 CTERQANFLGKIWPS 438
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|259126793|gb|ACV94298.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|209576195|gb|ACI64067.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 19 SNFRGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 70
Query: 591 KDRLRISD 598
RL S
Sbjct: 71 LGRLWPSS 78
>gi|407735058|gb|AFU28551.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQAN 432
Query: 590 FKDRLRISD 598
F ++ S
Sbjct: 433 FLGKIWPSS 441
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 436
>gi|409072262|gb|EKM73604.1| hypothetical protein AGABI1DRAFT_134416 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 175
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 544 CYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
C+ CG+ GH+G C + N +K N C+ CGK GH A+ C SN R+R
Sbjct: 103 CHKCGKFGHIGKNCEE--KRKNFEKKNFKCFSCGKFGHIAKDCRSNKSGRIR 152
>gi|6815637|gb|AAF28587.1|AF184455_1 gag protein [Human immunodeficiency virus 1]
Length = 183
Score = 45.8 bits (107), Expect = 0.066, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 11/60 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF R+
Sbjct: 131 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGRI 182
Score = 40.8 bits (94), Expect = 2.4, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ +
Sbjct: 137 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGR 181
>gi|333034125|gb|AEF12568.1| gag protein [Caprine arthritis encephalitis virus]
Length = 240
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 10/47 (21%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
K +CYNCG+ GHL +C +S CYKCGK+GH + C
Sbjct: 197 KSQTCYNCGKPGHLARQC----------RSGKTCYKCGKKGHMQKDC 233
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 374 QKKRRKKTRVIEAKDKVEDARKENEAKYNV-VLRMLLRKPRYFDPPGWNSETCSNCGKEN 432
QK K + ++K++ R+ + Y + +L LR R D S+TC NCGK
Sbjct: 152 QKVLGTKAQTSTVEEKLQACREVESSTYKMQLLAQALRPAREKDT---KSQTCYNCGKPG 208
Query: 433 HTAATCKMQKQNKPCFLCGSFKHRWKNCKQG 463
H A C + K C+ CG H K+C+QG
Sbjct: 209 HLARQC---RSGKTCYKCGKKGHMQKDCRQG 236
>gi|323331856|gb|EGA73268.1| Gis2p [Saccharomyces cerevisiae AWRI796]
gi|323346793|gb|EGA81072.1| Gis2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352848|gb|EGA85150.1| Gis2p [Saccharomyces cerevisiae VL3]
Length = 114
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 16/97 (16%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHL---CCVNSSIIGLKQVSCYNCGQ 549
C C +GH C K+ CY C H+ C I GLK CY CGQ
Sbjct: 28 CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISGLK---CYTCGQ 84
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+GH+ +C N + +CY C + GH ++ C
Sbjct: 85 AGHMSRDCQN----------DRLCYNCNETGHISKDC 111
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 35/135 (25%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C NCG+ H + C +Q+ CF NC Q + H++ +CP +
Sbjct: 10 CYNCGETGHVRSECTVQR----CF----------NCNQ---------TGHISRECPEPKK 46
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQV 542
+ S C +CG H C E D + ++CY C GH+ C N +
Sbjct: 47 TSRFSKVSCYKCGGPNHMAKDCMKE---DGISGLKCYTCGQAGHMSRDCQNDRL------ 97
Query: 543 SCYNCGQSGHLGPEC 557
CYNC ++GH+ +C
Sbjct: 98 -CYNCNETGHISKDC 111
>gi|407735295|gb|AFU28747.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 533 NSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SN 589
N + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +N
Sbjct: 381 NFNFKGQKKIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQAN 432
Query: 590 FKDRLRIS 597
F ++ S
Sbjct: 433 FLGKIWPS 440
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCNERQANFLGK 436
>gi|41052630|dbj|BAD08139.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|41052743|dbj|BAD07599.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|125580606|gb|EAZ21537.1| hypothetical protein OsJ_05164 [Oryza sativa Japonica Group]
gi|187609561|gb|ACD13288.1| cold shock domain protein 1 [Oryza sativa Japonica Group]
gi|215767546|dbj|BAG99774.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 241
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 20/114 (17%)
Query: 493 CLRCGDSGHDLSSC--------EGEYHADDLKKIQCYICKSFGHLC--CVNSSIIGLKQV 542
C +CG+SGH C G C+ C GH+ C NS G
Sbjct: 126 CFKCGESGHMARDCFNGGGVGVGGGGGGGGGAGGGCFKCGEMGHMARDCFNSGGGGGGGG 185
Query: 543 ------SCYNCGQSGHLGPECANSCEALNGKKSNLI----CYKCGKEGHFARRC 586
+CYNCG++GHL +C N G + CY CG+ GH AR C
Sbjct: 186 GGGGGGACYNCGETGHLARDCYNGGGGGGGGRFGGGGDRSCYNCGEAGHIARDC 239
>gi|6322111|ref|NP_012186.1| Air1p [Saccharomyces cerevisiae S288c]
gi|731833|sp|P40507.1|AIR1_YEAST RecName: Full=Protein AIR1; AltName: Full=Arginine
methyltransferase-interacting RING finger protein 1
gi|556868|emb|CAA86091.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151943084|gb|EDN61419.1| arginine methyltransferase-interacting ring finger protein
[Saccharomyces cerevisiae YJM789]
gi|285812572|tpg|DAA08471.1| TPA: Air1p [Saccharomyces cerevisiae S288c]
gi|349578874|dbj|GAA24038.1| K7_Air1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 360
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 57/163 (34%), Gaps = 30/163 (18%)
Query: 405 LRMLLRKPRYFDPPGWNSE--------TCSNCGKENHTAATCKMQKQNKPCFLCGSFK-H 455
LR L + RYF ++S C+NC + H C + C CG H
Sbjct: 48 LRTLRGQGRYFGITDYDSNGAIMEAEPKCNNCSQRGHLKRNCP----HVICTYCGFMDDH 103
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
++C + C + H S CP + FC C H C + + L
Sbjct: 104 YSQHCPKAIICTNCNANGHYKSQCP-----HKWKKVFCTLCNSKRHSRERCPSIWRSYLL 158
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
K N + V CYNCG +GH G +CA
Sbjct: 159 KTKD------------ANQGDFDFQTVFCYNCGNAGHFGDDCA 189
>gi|259126764|gb|ACV94287.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|353683120|gb|AER12463.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 523 CKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
+ G++ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH
Sbjct: 370 AQQHGNIMMQRGNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQ 421
Query: 583 ARRCG---SNFKDRLRISD 598
+ C +NF ++ S+
Sbjct: 422 MKDCTERQANFLGKIWPSN 440
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 391 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 435
>gi|259126762|gb|ACV94286.1| gag protein [Human immunodeficiency virus 1]
gi|259126766|gb|ACV94288.1| gag protein [Human immunodeficiency virus 1]
gi|259126778|gb|ACV94293.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|259126758|gb|ACV94284.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|403410299|dbj|BAM42612.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 18/76 (23%)
Query: 532 VNSSII-------GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFAR 584
NS+I+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH +
Sbjct: 368 TNSTILMQRSNFKGSKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMK 419
Query: 585 RCG---SNFKDRLRIS 597
C +NF ++ S
Sbjct: 420 DCTERQANFLGKIWPS 435
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 387 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 431
>gi|323348120|gb|EGA82374.1| Air1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 333
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 57/163 (34%), Gaps = 30/163 (18%)
Query: 405 LRMLLRKPRYFDPPGWNSE--------TCSNCGKENHTAATCKMQKQNKPCFLCGSFK-H 455
LR L + RYF ++S C+NC + H C + C CG H
Sbjct: 48 LRTLRGQGRYFGITDYDSNGAIMEAEPKCNNCSQRGHLKRNCP----HVICTYCGFMDDH 103
Query: 456 RWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDL 515
++C + C + H S CP + FC C H C + + L
Sbjct: 104 YSQHCPKAIICTNCNANGHYKSQCP-----HKWKKVFCTLCNSKRHSRERCPSIWRSYLL 158
Query: 516 KKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
K N + V CYNCG +GH G +CA
Sbjct: 159 KTKD------------TNQGDFDFQTVFCYNCGNAGHFGDDCA 189
>gi|259126799|gb|ACV94300.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|264687811|gb|ACY73896.1| gag protein [Small ruminant lentivirus]
Length = 242
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 10/47 (21%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
K +CYNCG+ GHL +C +S CYKCGK+GH + C
Sbjct: 203 KSQTCYNCGKPGHLARQC----------RSGKTCYKCGKKGHMQKDC 239
>gi|224986202|gb|ACN74778.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 15/102 (14%)
Query: 503 LSSCEG----EYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
+++C+G + A L + ++ ++ ++ + G K++ C+NCG+ GHL A
Sbjct: 347 MTACQGVGGPSHKARVLAEAMSHVQQANVNVMMQRGNFKGQKRIKCFNCGKEGHL----A 402
Query: 559 NSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRIS 597
+C A K C+KCGKEGH + C +NF ++ S
Sbjct: 403 RNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWPS 440
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 392 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 436
>gi|86371857|gb|ABC94971.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF +L
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKL 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|37934126|gb|AAO43900.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 575
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 540 KQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLRISDL 599
K + C+NCG+ GH+ A +C A K C+KCGKEGH + C + R +L
Sbjct: 35 KTIKCFNCGREGHI----AKNCRAPRKKG----CWKCGKEGHQMKDCTERQANFFR-ENL 85
Query: 600 LFTAERPPTRARHFVG----SNGTPHGLGNAQGRENDDQREKG 638
F P +AR F +N QGR+N+ E G
Sbjct: 86 AF----PQGKAREFPSEQTRANSPTRREPQVQGRDNNSLSEAG 124
>gi|264687795|gb|ACY73888.1| gag protein [Small ruminant lentivirus]
Length = 242
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 10/44 (22%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GHL +C +S CYKCGK+GH + C
Sbjct: 206 TCYNCGKPGHLARQC----------RSGKTCYKCGKKGHMQKDC 239
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 374 QKKRRKKTRVIEAKDKVEDARKENEAKYNV-VLRMLLRKPRYFDPPGWNSETCSNCGKEN 432
QK K + ++K++ R+ + Y + +L LR R D G +TC NCGK
Sbjct: 158 QKVLGTKAQTSTVEEKLQACREVESSTYKMQLLAQALRPTREKDARG---QTCYNCGKPG 214
Query: 433 HTAATCKMQKQNKPCFLCGSFKHRWKNCKQG 463
H A C + K C+ CG H K+C+QG
Sbjct: 215 HLARQC---RSGKTCYKCGKKGHMQKDCRQG 242
>gi|259127618|gb|ACV94625.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 383 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 434
Query: 595 RIS 597
S
Sbjct: 435 WPS 437
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 389 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 433
>gi|254580111|ref|XP_002496041.1| ZYRO0C09108p [Zygosaccharomyces rouxii]
gi|238938932|emb|CAR27108.1| ZYRO0C09108p [Zygosaccharomyces rouxii]
Length = 362
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 75/211 (35%), Gaps = 39/211 (18%)
Query: 353 MRLGRRVEDTVSVGPIVGERQQKKRRKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKP 412
M + R E T+ P V E + R K V D+V+D ++ LR + +
Sbjct: 1 MSMLREFE-TMDTLPFVKETAPQPRDKV--VAPTIDEVDDNPED--------LRDMRGQG 49
Query: 413 RYFDPPGWNS-----ETCSNCGKENHTAATCKMQKQNKPCFLCGSFK-HRWKNCKQGQDC 466
RYF G + C+NC + H C C CG+ H +C + C
Sbjct: 50 RYFGVAGEDGINEAEPKCNNCSQRGHFKRNCPHVI----CTYCGAMDDHYSHHCLKAIKC 105
Query: 467 FINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSF 526
S H S CP N FC C H C + + YI K
Sbjct: 106 SNCNESGHYRSQCP-----NKWKRVFCTLCNSKRHSRDRCPSVW--------RVYILKDE 152
Query: 527 GHLCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+ + + CYNCG GHLG EC
Sbjct: 153 N-----SKRTLPMHAFYCYNCGGKGHLGDEC 178
>gi|63014447|gb|AAY25621.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 528 HLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
H+ + G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C
Sbjct: 372 HIMMQRGNFKGQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDC 422
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCG+E H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 388 CFNCGREGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 432
>gi|55416329|gb|AAV50133.1| gag protein [Human immunodeficiency virus 1]
Length = 468
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 367 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKI 418
Query: 595 RISDLL----FTAERPPTRARHFVGSNGTPHGLGNAQGRENDDQ 634
S+ F RP A S G + +Q +E D+
Sbjct: 419 WPSNKGRPGNFLQNRPEPTAPPLAESFGFGEEITPSQKQEQKDK 462
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 373 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 417
>gi|407734723|gb|AFU28264.1| gag protein [Human immunodeficiency virus 1]
Length = 486
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 503 LSSCEG----EYHADDLKKIQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECA 558
+++C+G + A L + ++ + H+ + G K++ C+NCG+ GHL A
Sbjct: 347 MTACQGVGGPSHKARVLAEAMSHVQNT--HVMMQRGNFKGQKRIKCFNCGKEGHL----A 400
Query: 559 NSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRLRIS 597
+C A K C+KCGKEGH + C +NF ++ S
Sbjct: 401 RNCRAPRKKG----CWKCGKEGHQMKDCTERQANFLGKIWPS 438
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|281331900|emb|CAY83110.1| gag-pol fusion polyprotein precursor [Human immunodeficiency virus
1]
Length = 1428
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKDRLR 595
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C + LR
Sbjct: 379 GPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCNERQANFLR 428
>gi|259126788|gb|ACV94296.1| gag protein [Human immunodeficiency virus 1]
gi|259126790|gb|ACV94297.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|6643026|gb|AAF20387.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 380 SNFKGQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 431
Query: 591 KDRLRISD 598
++ S+
Sbjct: 432 LGKIWPSN 439
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K+C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|407732431|gb|AFU26334.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 378 SNFKGQKRIKCFNCGREGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 429
Query: 591 KDRLRISD 598
++ S+
Sbjct: 430 LGKIWSSN 437
>gi|299930213|gb|ADJ58314.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|264687805|gb|ACY73893.1| gag protein [Small ruminant lentivirus]
Length = 242
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 10/44 (22%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GHL +C +S CYKCGK+GH + C
Sbjct: 206 TCYNCGKPGHLARQC----------RSGKTCYKCGKKGHMQKDC 239
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 374 QKKRRKKTRVIEAKDKVEDARKENEAKYNV-VLRMLLRKPRYFDPPGWNSETCSNCGKEN 432
QK K + ++K++ R+ + Y + +L LR R D G +TC NCGK
Sbjct: 158 QKVLGTKAQTSTVEEKLQACREVESSTYKMQLLAQALRPTREKDARG---QTCYNCGKPG 214
Query: 433 HTAATCKMQKQNKPCFLCGSFKHRWKNCKQG 463
H A C + K C+ CG H K+C+QG
Sbjct: 215 HLARQC---RSGKTCYKCGKKGHMQKDCRQG 242
>gi|260950189|ref|XP_002619391.1| hypothetical protein CLUG_00550 [Clavispora lusitaniae ATCC 42720]
gi|238846963|gb|EEQ36427.1| hypothetical protein CLUG_00550 [Clavispora lusitaniae ATCC 42720]
Length = 399
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 51/146 (34%), Gaps = 47/146 (32%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C NC K H + CK C CG +H + CP T
Sbjct: 134 CDNCHKRGHVRSKCKTVV----CHKCGVV------------------GDHYETQCPTT-- 169
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH----LCCVNSSIIG-- 538
C RCG+ GH +S C+ + K+ C C +F H + S I
Sbjct: 170 ------MICSRCGERGHMVSMCK----SKTRKRQYCRHCDTFSHGDDNCPSIWRSYITKV 219
Query: 539 -------LKQVSCYNCGQSGHLGPEC 557
L +SCYNCG H G EC
Sbjct: 220 QKDEEYVLPAISCYNCGDDTHFGDEC 245
>gi|183206858|gb|ACC54596.1| gag protein [Human immunodeficiency virus 1]
Length = 175
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 534 SSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNF 590
S+ G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF
Sbjct: 58 SNFKGPKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTERQANF 109
Query: 591 KDRLRISD 598
R+ S+
Sbjct: 110 LGRIWPSN 117
>gi|85095325|ref|XP_960060.1| hypothetical protein NCU05800 [Neurospora crassa OR74A]
gi|28921519|gb|EAA30824.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 225
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 70/192 (36%), Gaps = 39/192 (20%)
Query: 424 TCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCK-----QGQDCFINKGSEHLASD 478
C CG+ H A C ++ C+ C H C + + C+ +G H+ +D
Sbjct: 8 ACYKCGELGHHAEACS--SPHRLCYNCKQPNHESSECPLPRSTEAKQCYHCQGLGHVQAD 65
Query: 479 CPGTDQGNNLSSNFCLRCGDSGHDLSSCEGE---------------------YHADDLKK 517
CP S++ C CG GH + +C A +
Sbjct: 66 CPTLRISGAGSTSRCYNCGQPGHYMRACPNPPTGIPRGAPVGRGGFGGFGRGGFAGGARP 125
Query: 518 IQCYICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNL---ICY 574
CY C H + + + CY CG+ GH+ + C A NG N CY
Sbjct: 126 ATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----SRDCTAPNGGPLNTAGKTCY 177
Query: 575 KCGKEGHFARRC 586
+C + GH +R C
Sbjct: 178 QCSETGHISRDC 189
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 49/140 (35%), Gaps = 39/140 (27%)
Query: 486 NNLSSNFCLRCGDSGHDLSSCEGEYH-----------------ADDLKKIQCYICKSFGH 528
++LS C +CG+ GH +C + + QCY C+ GH
Sbjct: 2 SSLSRRACYKCGELGHHAEACSSPHRLCYNCKQPNHESSECPLPRSTEAKQCYHCQGLGH 61
Query: 529 LC--CVNSSIIGLKQVS-CYNCGQSGHLGPECANSCEAL-------------------NG 566
+ C I G S CYNCGQ GH C N + G
Sbjct: 62 VQADCPTLRISGAGSTSRCYNCGQPGHYMRACPNPPTGIPRGAPVGRGGFGGFGRGGFAG 121
Query: 567 KKSNLICYKCGKEGHFARRC 586
CYKCG HFAR C
Sbjct: 122 GARPATCYKCGGPNHFARDC 141
>gi|259127597|gb|ACV94615.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 383 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 434
Query: 595 RIS 597
S
Sbjct: 435 WPS 437
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 389 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 433
>gi|259127594|gb|ACV94614.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 383 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 434
Query: 595 RIS 597
S
Sbjct: 435 WPS 437
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 389 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 433
>gi|259126783|gb|ACV94295.1| gag protein [Human immunodeficiency virus 1]
gi|259126795|gb|ACV94299.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|219109499|ref|XP_002176504.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411039|gb|EEC50967.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 109
Score = 45.8 bits (107), Expect = 0.071, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 43/130 (33%), Gaps = 29/130 (22%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQ 484
C C + H A C + + KPC C H C CF
Sbjct: 1 CFRCDEVGHIEAECPNKPKPKPCSFCAQTDHEMYRCPLKVVCF----------------- 43
Query: 485 GNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQ-CYICKSFGHLCCVNSS-IIGLKQV 542
CG GH +C + + C+ C GH C GL+ V
Sbjct: 44 ----------NCGIPGHPSRACNMPRGLPERRVCSICFHCGRPGHFLCKEMRWYFGLEGV 93
Query: 543 SCYNCGQSGH 552
+C NCGQ+GH
Sbjct: 94 TCANCGQAGH 103
Score = 40.4 bits (93), Expect = 2.6, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 17/93 (18%)
Query: 493 CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH---LCCVNSSIIGLKQVSCYNCGQ 549
C RC + GH + C + K C C H C + +V C+NCG
Sbjct: 1 CFRCDEVGHIEAEC-----PNKPKPKPCSFCAQTDHEMYRCPL--------KVVCFNCGI 47
Query: 550 SGHLGPECANSCEALNGKKSNLICYKCGKEGHF 582
GH C N L ++ IC+ CG+ GHF
Sbjct: 48 PGHPSRAC-NMPRGLPERRVCSICFHCGRPGHF 79
>gi|403220935|dbj|BAM39068.1| uncharacterized protein TOT_010000531 [Theileria orientalis strain
Shintoku]
Length = 297
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEH-LASDCPGTD 483
C C K H C+ + CF CGS +H KNCK + + ++ L + PG
Sbjct: 158 CFGCRKRGHLLKDCRENRSETVCFRCGSKEHTLKNCKFKSNSTVVIAEDYTLGKEGPGVA 217
Query: 484 QGNNLSSNF--CLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
+ + + C CG GH S C K CY C S
Sbjct: 218 EETKVELPYASCFVCGQVGHLSSQCPQNPKGMYPKGSGCYFCGS 261
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 466 CFINKGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKS 525
CF + HL DC N S C RCG H L +C+ + ++ + + K
Sbjct: 158 CFGCRKRGHLLKDC-----RENRSETVCFRCGSKEHTLKNCKFKSNSTVVIAEDYTLGKE 212
Query: 526 FGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCG 577
+ + + L SC+ CGQ GHL +C + + + K S CY CG
Sbjct: 213 GPGV--AEETKVELPYASCFVCGQVGHLSSQCPQNPKGMYPKGSG--CYFCG 260
>gi|260103571|gb|ACX31802.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|259127601|gb|ACV94617.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 383 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 434
Query: 595 RIS 597
S
Sbjct: 435 WPS 437
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 389 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 433
>gi|259126770|gb|ACV94290.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|259126768|gb|ACV94289.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|350432388|gb|AEQ28456.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 12/64 (18%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGS----NFKDR 593
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C S NF +
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKDCTSGRQANFLGK 435
Query: 594 LRIS 597
+ S
Sbjct: 436 IWPS 439
>gi|264687823|gb|ACY73902.1| gag protein [Small ruminant lentivirus]
Length = 242
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 10/44 (22%)
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRC 586
+CYNCG+ GHL +C +S CYKCGK+GH + C
Sbjct: 206 TCYNCGKPGHLARQC----------RSGKTCYKCGKKGHMQKDC 239
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 374 QKKRRKKTRVIEAKDKVEDARKENEAKYNV-VLRMLLRKPRYFDPPGWNSETCSNCGKEN 432
QK K + ++K++ R+ + Y + +L LR R D G +TC NCGK
Sbjct: 158 QKVLGTKAQTSTVEEKLQACREVESSTYKMQLLAQALRPTREKDARG---QTCYNCGKPG 214
Query: 433 HTAATCKMQKQNKPCFLCGSFKHRWKNCKQG 463
H A C + K C+ CG H K+C+QG
Sbjct: 215 HLARQC---RSGKTCYKCGKKGHMQKDCRQG 242
>gi|389608533|dbj|BAM17876.1| similar to CG3800 [Papilio xuthus]
Length = 144
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 18/126 (14%)
Query: 466 CFINKGSEHLASDC-----PGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQC 520
C+ + H A +C D G N C +C +GH C+ E AD +C
Sbjct: 6 CYKCNRTGHFARECTQGGVASRDTGFNRQREKCFKCNRTGHFARDCKEE--AD-----RC 58
Query: 521 YICKSFGHLCCVNSSIIGLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEG 580
Y C GH+ + SCYNC ++GH+ A +C S CY C K G
Sbjct: 59 YRCNGTGHI--ARECAQSPDEPSCYNCNKTGHI----ARNCPEGGRDSSGQTCYTCNKAG 112
Query: 581 HFARRC 586
H +R C
Sbjct: 113 HISRNC 118
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 24/149 (16%)
Query: 421 NSETCSNCGKENHTAATCK----------MQKQNKPCFLCGSFKHRWKNCKQGQD-CFIN 469
+S C C + H A C +Q + CF C H ++CK+ D C+
Sbjct: 2 SSSVCYKCNRTGHFARECTQGGVASRDTGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 61
Query: 470 KGSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSC-EGEYHADDLKKIQCYICKSFGH 528
G+ H+A +C Q + S C C +GH +C EG D CY C GH
Sbjct: 62 NGTGHIARECA---QSPDEPS--CYNCNKTGHIARNCPEG---GRDSSGQTCYTCNKAGH 113
Query: 529 LCCVNSSIIGLKQVSCYNCGQSGHLGPEC 557
+ + G K +CY CG+ GH+ +C
Sbjct: 114 I--SRNCPDGTK--TCYVCGKPGHISRDC 138
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 16/110 (14%)
Query: 488 LSSNFCLRCGDSGHDLSSC-EGEYHADDL----KKIQCYICKSFGHLCCVNSSIIGLKQV 542
+SS+ C +C +GH C +G + D ++ +C+ C GH + +
Sbjct: 1 MSSSVCYKCNRTGHFARECTQGGVASRDTGFNRQREKCFKCNRTGHF----ARDCKEEAD 56
Query: 543 SCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCGSNFKD 592
CY C +GH+ ECA S CY C K GH AR C +D
Sbjct: 57 RCYRCNGTGHIARECAQS-------PDEPSCYNCNKTGHIARNCPEGGRD 99
>gi|259126752|gb|ACV94281.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 538 GLKQVSCYNCGQSGHLGPECANSCEALNGKKSNLICYKCGKEGHFARRCG---SNFKDRL 594
G K++ C+NCG+ GHL A +C A K C+KCGKEGH + C +NF ++
Sbjct: 384 GQKRIKCFNCGKEGHL----ARNCRAPRKKG----CWKCGKEGHQMKECTERQANFLGKI 435
Query: 595 RIS 597
S
Sbjct: 436 WPS 438
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 425 CSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
C NCGKE H A C+ ++ K C+ CG H+ K C + Q F+ K
Sbjct: 390 CFNCGKEGHLARNCRAPRK-KGCWKCGKEGHQMKECTERQANFLGK 434
>gi|149246838|ref|XP_001527844.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447798|gb|EDK42186.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 444
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 78/233 (33%), Gaps = 78/233 (33%)
Query: 413 RYF--DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINK 470
RYF P C NC K H A CK+ C CG K
Sbjct: 87 RYFGVSDPKKEGPICDNCHKRGHKRANCKVVI----CHKCG------------------K 124
Query: 471 GSEHLASDCPGTDQGNNLSSNFCLRCGDSGHDLSSCEGEYHADDLKKIQCYICKSFGH-- 528
+H + CP T CLRCG+ GH + C+ + K+ C C +F H
Sbjct: 125 VGDHYETHCPTT--------LICLRCGEKGHYVLECK----SKTRKRQYCRTCDTFQHGD 172
Query: 529 --LCCVNSSIIG---------------LKQVSCYNCGQSGHLGPECANSCEALNGKKSNL 571
+ S I L + CYNCG H G EC E + + NL
Sbjct: 173 ENCPTIWRSYITNPQSRAMDEQGESSVLPVICCYNCGSKVHYGDECP---EPRSSRVPNL 229
Query: 572 ICYKCGKEGHFARRCGSNFKDRLRISDLLFTA--------ERPPTRARHFVGS 616
+ G+N RLR L F E P R+RH G+
Sbjct: 230 ----------GSAFSGNNLPKRLR--PLYFLGLKRDSGYDEYDPLRSRHDYGT 270
>gi|85089923|ref|XP_958173.1| hypothetical protein NCU04617 [Neurospora crassa OR74A]
gi|21622510|emb|CAD37057.1| conserved hypothetical protein [Neurospora crassa]
gi|28919506|gb|EAA28937.1| predicted protein [Neurospora crassa OR74A]
Length = 787
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 23/134 (17%)
Query: 438 CKMQKQNKPCFLCGSFKHRWKNCKQGQDCFINKGSEHLASDCPGTDQGNNLSSNFCLRCG 497
C +++ C C S+ H C + + +EH + CP S C C
Sbjct: 441 CGLEQDQLFCIECASYSHDSSQCPLLTCRWCSAVAEHPSYACP--------SRRRCTECR 492
Query: 498 DSGHDLSSCEGEYHADDLKKIQCYICKSF-GHL--CCV-----------NSSIIGLKQVS 543
GH+ SC E A +++C IC S GHL CV SS + +
Sbjct: 493 QLGHESESCT-EKLALPRDQMECAICGSRDGHLEDSCVELWRTFKPDPLTSSKVQALPIY 551
Query: 544 CYNCGQSGHLGPEC 557
CY CG +GH G +C
Sbjct: 552 CYCCGNAGHYGADC 565
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,966,002,844
Number of Sequences: 23463169
Number of extensions: 432609080
Number of successful extensions: 1712881
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 25115
Number of HSP's that attempted gapping in prelim test: 1490472
Number of HSP's gapped (non-prelim): 156546
length of query: 638
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 489
effective length of database: 8,863,183,186
effective search space: 4334096577954
effective search space used: 4334096577954
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)