BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006620
(638 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 152/260 (58%), Gaps = 16/260 (6%)
Query: 350 VAIKVLNETKGNGED--FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K L E + G + F EV IS H N++ L GFC R L+Y +++NGS+
Sbjct: 65 VAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 124
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E+ E+ L W +IA+G ARGL YLH C+ +I+H D+K NILLDE+F
Sbjct: 125 CLRERP--ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 182
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-TG 526
+ DFGLAK+ + ++ V RGTIG+IAPE + G+ S K+DV+ YG+M+ E+ TG
Sbjct: 183 VGDFGLAKLMDYKDXHVX-XAVRGTIGHIAPEYL--STGKSSEKTDVFGYGVMLLELITG 239
Query: 527 EKNNANVAVDRSSEIYFPHWVY-----KRLELEEDLGLQGIENEEDKEYARKMILVSLWC 581
++ + ++ WV K+LE D+ LQG N +D+E ++I V+L C
Sbjct: 240 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG--NYKDEE-VEQLIQVALLC 296
Query: 582 IQTNPSDRPSMNRVVEMLEG 601
Q++P +RP M+ VV MLEG
Sbjct: 297 TQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 151/260 (58%), Gaps = 16/260 (6%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K L E T+G F EV IS H N++ L GFC R L+Y +++NGS+
Sbjct: 57 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 116
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E+ E+ L W +IA+G ARGL YLH C+ +I+H D+K NILLDE+F
Sbjct: 117 CLRERP--ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-TG 526
+ DFGLAK+ + ++ V RG IG+IAPE + G+ S K+DV+ YG+M+ E+ TG
Sbjct: 175 VGDFGLAKLMDYKDXHVX-XAVRGXIGHIAPEYL--STGKSSEKTDVFGYGVMLLELITG 231
Query: 527 EKNNANVAVDRSSEIYFPHWVY-----KRLELEEDLGLQGIENEEDKEYARKMILVSLWC 581
++ + ++ WV K+LE D+ LQG N +D+E ++I V+L C
Sbjct: 232 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG--NYKDEE-VEQLIQVALLC 288
Query: 582 IQTNPSDRPSMNRVVEMLEG 601
Q++P +RP M+ VV MLEG
Sbjct: 289 TQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 132/233 (56%), Gaps = 18/233 (7%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
H ++V+L+GFC E + LIY+++ NG+L++ ++ L T + WE +I +G ARG
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS-DLPT-MSMSWEQRLEICIGAARG 151
Query: 437 LEYLHRGCNTR-ILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGY 495
L YLH TR I+H D+K NILLDE+F PKI+DFG++K + +GT+GY
Sbjct: 152 LHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEE 555
I PE F + G ++ KSDVYS+G+++FE+ ++ ++ R + W +E
Sbjct: 208 IDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-VNLAEWA---VESHN 261
Query: 556 DLGLQGI--ENEEDK---EYARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
+ L+ I N DK E RK ++ C+ + DRPSM V+ LE +L
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 131/233 (56%), Gaps = 18/233 (7%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
H ++V+L+GFC E + LIY+++ NG+L++ ++ L T + WE +I +G ARG
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS-DLPT-MSMSWEQRLEICIGAARG 151
Query: 437 LEYLHRGCNTR-ILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGY 495
L YLH TR I+H D+K NILLDE+F PKI+DFG++K +GT+GY
Sbjct: 152 LHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEE 555
I PE F + G ++ KSDVYS+G+++FE+ ++ ++ R + W +E
Sbjct: 208 IDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-VNLAEWA---VESHN 261
Query: 556 DLGLQGI--ENEEDK---EYARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
+ L+ I N DK E RK ++ C+ + DRPSM V+ LE +L
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 123/242 (50%), Gaps = 18/242 (7%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
+ F E+ +++ H N+V LLGF +G L+Y ++ NGSL + L+ L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPLS 131
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
W + KIA G A G+ +LH + +H DIK NILLDE F KISDFGLA+ E
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE-MTGEKNNANVAVDRSSEI 541
V + GT Y+APE GE++ KSD+YS+G+++ E +TG AVD E
Sbjct: 189 TVMXSRIVGTTAYMAPEAL---RGEITPKSDIYSFGVVLLEIITGLP-----AVDEHREP 240
Query: 542 YFPHWVYKRLELEEDLGLQGIE---NEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVEM 598
+ + +E EE I+ N+ D M V+ C+ + RP + +V ++
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 599 LE 600
L+
Sbjct: 301 LQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 18/242 (7%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
+ F E+ +++ H N+V LLGF +G L+Y ++ NGSL + L+ L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPLS 131
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
W + KIA G A G+ +LH + +H DIK NILLDE F KISDFGLA+ E
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE-MTGEKNNANVAVDRSSEI 541
V GT Y+APE GE++ KSD+YS+G+++ E +TG AVD E
Sbjct: 189 TVMXXRIVGTTAYMAPEAL---RGEITPKSDIYSFGVVLLEIITGLP-----AVDEHREP 240
Query: 542 YFPHWVYKRLELEEDLGLQGIE---NEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVEM 598
+ + +E EE I+ N+ D M V+ C+ + RP + +V ++
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 599 LE 600
L+
Sbjct: 301 LQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 18/242 (7%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
+ F E+ +++ H N+V LLGF +G L+Y ++ NGSL + L+ L
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPLS 125
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
W + KIA G A G+ +LH + +H DIK NILLDE F KISDFGLA+ E
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE-MTGEKNNANVAVDRSSEI 541
V GT Y+APE GE++ KSD+YS+G+++ E +TG AVD E
Sbjct: 183 XVMXXRIVGTTAYMAPEAL---RGEITPKSDIYSFGVVLLEIITGLP-----AVDEHREP 234
Query: 542 YFPHWVYKRLELEEDLGLQGIE---NEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVEM 598
+ + +E EE I+ N+ D M V+ C+ + RP + +V ++
Sbjct: 235 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 294
Query: 599 LE 600
L+
Sbjct: 295 LQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 118/242 (48%), Gaps = 18/242 (7%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
+ F E+ ++ H N+V LLGF +G L+Y + NGSL + L+ L
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL---LDRLSCLDGTPPLS 122
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
W KIA G A G+ +LH + +H DIK NILLDE F KISDFGLA+ E
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE-MTGEKNNANVAVDRSSEI 541
V + GT Y APE GE++ KSD+YS+G+++ E +TG AVD E
Sbjct: 180 XVXXSRIVGTTAYXAPEAL---RGEITPKSDIYSFGVVLLEIITGLP-----AVDEHREP 231
Query: 542 YFPHWVYKRLELEEDLGLQGIE---NEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVEM 598
+ + +E EE I+ N+ D V+ C+ + RP + +V ++
Sbjct: 232 QLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQL 291
Query: 599 LE 600
L+
Sbjct: 292 LQ 293
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 45 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 105 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 157
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 158 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 214
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 215 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 260
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 261 RPSFAEIHQAFE 272
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 45 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 104
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 105 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 157
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 158 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 214
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 215 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 260
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 261 RPSFAEIHQAFE 272
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 44 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 103
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 104 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 156
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 157 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 213
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 214 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 259
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 260 RPSFAEIHQAFE 271
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 45 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 105 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 157
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 158 ADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 214
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 215 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 260
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 261 RPSFAEIHQAFE 272
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 100 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 152
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 153 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 209
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 210 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 255
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 256 RPSFAEIHQAFE 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 100 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 152
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 153 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 209
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 210 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 255
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 256 RPSFAEIHQAFE 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 41 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 100
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 101 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 153
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 154 ADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 210
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 211 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 256
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 257 RPSFAEIHQAFE 268
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 42 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 102 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 154
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 155 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 211
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 212 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 257
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 258 RPSFAEIHQAFE 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 41 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 100
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 101 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 153
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 154 ADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 210
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 211 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 256
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 257 RPSFAEIHQAFE 268
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 42 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 102 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 154
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 155 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 211
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 212 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 257
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 258 RPSFAEIHQAFE 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 45 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 105 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 157
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 158 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 214
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 215 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 260
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 261 RPSFAEIHQAFE 272
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 53 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 112
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 113 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 165
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 166 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 222
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 223 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 268
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 269 RPSFAEIHQAFE 280
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 42 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E N VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 102 LRECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 154
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 155 ADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 211
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 212 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 257
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 258 RPSFAEIHQAFE 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 38 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 97
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + Q++ VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 98 LRECN----RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 150
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 151 ADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 207
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D P VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 208 MSPYPGID-------PSQVYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 253
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 254 RPSFAEIHQAFE 265
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 38 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + Q++ VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 98 LRECN----RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 150
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 151 ADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 207
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D P VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 208 MSPYPGID-------PSQVYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 253
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 254 RPSFAEIHQAFE 265
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 38 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + Q++ VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 98 LRECN----RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 150
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 151 ADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 207
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D P VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 208 MSPYPGID-------PSQVYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 253
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 254 RPSFAEIHQAFE 265
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 45 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + Q++ VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 105 LRECN----RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 157
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 158 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 214
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 215 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 260
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 261 RPSFAEIHQAFE 272
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + Q++ VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 100 LRECN----RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 152
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 153 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 209
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 210 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 255
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 256 RPSFAEIHQAFE 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + Q++ VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 100 LRECN----RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 152
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 153 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 209
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 210 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 255
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 256 RPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + Q++ VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 100 LRECN----RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 152
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 153 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 209
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 210 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 255
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 256 RPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L +
Sbjct: 40 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + Q++ VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 100 LRECN----RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 152
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 153 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYG 209
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY+ LE+D ++ E +K Y C Q NPSD
Sbjct: 210 MSPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSD 255
Query: 589 RPSMNRVVEMLE 600
RPS + + E
Sbjct: 256 RPSFAEIHQAFE 267
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 24/251 (9%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L ++
Sbjct: 287 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 346
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
E + E N VL +A I+ +EYL + +H ++ N L+ E+ K++
Sbjct: 347 RECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVA 399
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKN 529
DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 400 DFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGM 456
Query: 530 NANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDR 589
+ +D S VY+ LE+D ++ E +K Y C Q NPSDR
Sbjct: 457 SPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSDR 502
Query: 590 PSMNRVVEMLE 600
PS + + E
Sbjct: 503 PSFAEIHQAFE 513
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 43/274 (15%)
Query: 349 NVAIKVLNETKGNGE---DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+L E + E +F+ EVA + R H NIV +G + +++ E++S GSL
Sbjct: 62 DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Query: 406 EKFIHE---KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE 462
+ +H+ + L+ ++L +A +A+G+ YLH N I+H ++K N+L+D+
Sbjct: 122 YRLLHKSGAREQLDERRRL------SMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDK 174
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
+ K+ DFGL+++ + +S A GT ++APEV + KSDVYS+G++++
Sbjct: 175 KYTVKVCDFGLSRLKAS--TFLSSKSAAGTPEWMAPEVLRDE--PSNEKSDVYSFGVILW 230
Query: 523 EMT------GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMIL 576
E+ G N A V + KRLE+ +L Q E
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKC-------KRLEIPRNLNPQVAAIIEG--------- 274
Query: 577 VSLWCIQTNPSDRPSMNRVVEMLEGSLDSLQIPP 610
C P RPS ++++L + S PP
Sbjct: 275 ----CWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 24/251 (9%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L ++
Sbjct: 245 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 304
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
E + E N VL +A I+ +EYL + +H ++ N L+ E+ K++
Sbjct: 305 RECNRQEVNAV----VLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVA 357
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKN 529
DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 358 DFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGM 414
Query: 530 NANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDR 589
+ +D S VY+ LE+D ++ E +K Y C Q NPSDR
Sbjct: 415 SPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSDR 460
Query: 590 PSMNRVVEMLE 600
PS + + E
Sbjct: 461 PSFAEIHQAFE 471
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 125/251 (49%), Gaps = 24/251 (9%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L E E+F+ E A + H N+V LLG C +I EF++ G+L ++
Sbjct: 248 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 307
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
E + Q++ VL +A I+ +EYL + +H ++ N L+ E+ K++
Sbjct: 308 RECN----RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVA 360
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKN 529
DFGL+++ G ++ + GA+ I + APE N + S KSDV+++G++++E+
Sbjct: 361 DFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGM 417
Query: 530 NANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDR 589
+ +D S VY+ LE+D ++ E +K Y C Q NPSDR
Sbjct: 418 SPYPGIDLSQ-------VYEL--LEKDYRMERPEGCPEKVYELMRA-----CWQWNPSDR 463
Query: 590 PSMNRVVEMLE 600
PS + + E
Sbjct: 464 PSFAEIHQAFE 474
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 43/274 (15%)
Query: 349 NVAIKVLNETKGNGE---DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+L E + E +F+ EVA + R H NIV +G + +++ E++S GSL
Sbjct: 62 DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Query: 406 EKFIHE---KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE 462
+ +H+ + L+ ++L +A +A+G+ YLH N I+H D+K N+L+D+
Sbjct: 122 YRLLHKSGAREQLDERRRL------SMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDK 174
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
+ K+ DFGL+++ + A GT ++APEV + KSDVYS+G++++
Sbjct: 175 KYTVKVCDFGLSRLKAS--XFLXSKXAAGTPEWMAPEVLRDE--PSNEKSDVYSFGVILW 230
Query: 523 EMT------GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMIL 576
E+ G N A V + KRLE+ +L Q E
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKC-------KRLEIPRNLNPQVAAIIEG--------- 274
Query: 577 VSLWCIQTNPSDRPSMNRVVEMLEGSLDSLQIPP 610
C P RPS ++++L + S PP
Sbjct: 275 ----CWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 25/251 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK + E + EDFI E + + SH +V L G C E L++EF+ +G L +
Sbjct: 31 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 90
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ + L E L + + + G+ YL C ++H D+ N L+ E+ K+
Sbjct: 91 LRTQRGL-----FAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 142
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
SDFG+ + + S TG + + + +PEVF +F S KSDV+S+G++++E+ E
Sbjct: 143 SDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEG 199
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
P+ E+ ED+ G + + + + + C + P D
Sbjct: 200 K-------------IPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMNHCWKERPED 245
Query: 589 RPSMNRVVEML 599
RP+ +R++ L
Sbjct: 246 RPAFSRLLRQL 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 25/251 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK + E + EDFI E + + SH +V L G C E L++EF+ +G L +
Sbjct: 33 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ + L E L + + + G+ YL C ++H D+ N L+ E+ K+
Sbjct: 93 LRTQRGL-----FAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 144
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
SDFG+ + + S TG + + + +PEVF +F S KSDV+S+G++++E+ E
Sbjct: 145 SDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEG 201
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
P+ E+ ED+ G + + + + + C + P D
Sbjct: 202 K-------------IPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMNHCWKERPED 247
Query: 589 RPSMNRVVEML 599
RP+ +R++ L
Sbjct: 248 RPAFSRLLRQL 258
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 25/251 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK + E + EDFI E + + SH +V L G C E L++EF+ +G L +
Sbjct: 36 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ + L E L + + + G+ YL C ++H D+ N L+ E+ K+
Sbjct: 96 LRTQRGL-----FAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 147
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
SDFG+ + + S TG + + + +PEVF +F S KSDV+S+G++++E+ E
Sbjct: 148 SDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEG 204
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
P+ E+ ED+ G + + + + + C + P D
Sbjct: 205 K-------------IPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMNHCWRERPED 250
Query: 589 RPSMNRVVEML 599
RP+ +R++ L
Sbjct: 251 RPAFSRLLRQL 261
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 131/260 (50%), Gaps = 31/260 (11%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + + A++ ++ SL
Sbjct: 36 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSL 94
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H ET K + + L IA ARG++YLH I+H D+K +NI L ED
Sbjct: 95 ---YHHLHASET--KFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNT 146
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA + G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 147 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 206
Query: 524 MTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYA---RKMILVSLW 580
MTG+ +N+ R ++ E +G + + K + ++M +
Sbjct: 207 MTGQLPYSNIN--------------NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAE 252
Query: 581 CIQTNPSDRPSMNRVVEMLE 600
C++ +RPS R++ +E
Sbjct: 253 CLKKKRDERPSFPRILAEIE 272
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 25/251 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK + E + +DFI E + + SH +V L G C E L++EF+ +G L +
Sbjct: 53 KVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 112
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ + L E L + + + G+ YL C ++H D+ N L+ E+ K+
Sbjct: 113 LRTQRGL-----FAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 164
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
SDFG+ + + S TG + + + +PEVF +F S KSDV+S+G++++E+ E
Sbjct: 165 SDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEG 221
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
P+ E+ ED+ G + + + + + C + P D
Sbjct: 222 K-------------IPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMNHCWKERPED 267
Query: 589 RPSMNRVVEML 599
RP+ +R++ L
Sbjct: 268 RPAFSRLLRQL 278
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 25/251 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK + E + EDFI E + + SH +V L G C E L+ EF+ +G L +
Sbjct: 34 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ + L E L + + + G+ YL C ++H D+ N L+ E+ K+
Sbjct: 94 LRTQRGL-----FAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 145
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
SDFG+ + + S TG + + + +PEVF +F S KSDV+S+G++++E+ E
Sbjct: 146 SDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEG 202
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
P+ E+ ED+ G + + + + + C + P D
Sbjct: 203 K-------------IPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMNHCWRERPED 248
Query: 589 RPSMNRVVEML 599
RP+ +R++ L
Sbjct: 249 RPAFSRLLRQL 259
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 14/190 (7%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + + A++ ++ SL
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSL 95
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H +ET K + L IA A+G++YLH I+H D+K +NI L ED
Sbjct: 96 ---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLT 147
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA + G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 148 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
Query: 524 MTGEKNNANV 533
MTG+ +N+
Sbjct: 208 MTGQLPYSNI 217
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 14/190 (7%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + A++ ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 90
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H +ET K + L IA A+G++YLH I+H D+K +NI L ED
Sbjct: 91 ---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLT 142
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA + G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
Query: 524 MTGEKNNANV 533
MTG+ +N+
Sbjct: 203 MTGQLPYSNI 212
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 14/190 (7%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + + A++ ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSL 90
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H +ET K + L IA A+G++YLH I+H D+K +NI L ED
Sbjct: 91 ---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLT 142
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA + G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
Query: 524 MTGEKNNANV 533
MTG+ +N+
Sbjct: 203 MTGQLPYSNI 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 14/190 (7%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + + A++ ++ SL
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSL 95
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H +ET K + L IA A+G++YLH I+H D+K +NI L ED
Sbjct: 96 ---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLT 147
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA + G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 148 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
Query: 524 MTGEKNNANV 533
MTG+ +N+
Sbjct: 208 MTGQLPYSNI 217
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 14/190 (7%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + + A++ ++ SL
Sbjct: 34 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSL 92
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H +ET K + L IA A+G++YLH I+H D+K +NI L ED
Sbjct: 93 ---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLT 144
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA + G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 145 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 204
Query: 524 MTGEKNNANV 533
MTG+ +N+
Sbjct: 205 MTGQLPYSNI 214
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 14/190 (7%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + + A++ ++ SL
Sbjct: 59 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSL 117
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H +ET K + L IA A+G++YLH I+H D+K +NI L ED
Sbjct: 118 ---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLT 169
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA + G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 170 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 229
Query: 524 MTGEKNNANV 533
MTG+ +N+
Sbjct: 230 MTGQLPYSNI 239
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 14/190 (7%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + + A++ ++ SL
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSL 118
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H +ET K + L IA A+G++YLH I+H D+K +NI L ED
Sbjct: 119 ---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLT 170
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA + G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 171 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
Query: 524 MTGEKNNANV 533
MTG+ +N+
Sbjct: 231 MTGQLPYSNI 240
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 101/178 (56%), Gaps = 11/178 (6%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
+KV++ T + F NEVA + +T HVNI+ +G+ + + A++ ++ SL K +H
Sbjct: 66 LKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHV 124
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
+ ET K + L IA A+G++YLH I+H D+K +NI L E KI DF
Sbjct: 125 Q---ET--KFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDF 176
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE-MTGE 527
GLA + + G++ ++APEV ++ S++SDVYSYG++++E MTGE
Sbjct: 177 GLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 25/251 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK + E + EDFI E + + SH +V L G C E L++EF+ +G L +
Sbjct: 33 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ + L E L + + + G+ YL ++H D+ N L+ E+ K+
Sbjct: 93 LRTQRGL-----FAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKV 144
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
SDFG+ + + S TG + + + +PEVF +F S KSDV+S+G++++E+ E
Sbjct: 145 SDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEG 201
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
P+ E+ ED+ G + + + + + C + P D
Sbjct: 202 K-------------IPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMNHCWKERPED 247
Query: 589 RPSMNRVVEML 599
RP+ +R++ L
Sbjct: 248 RPAFSRLLRQL 258
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 129/260 (49%), Gaps = 31/260 (11%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + A++ ++ SL
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 106
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H ET K + + L IA ARG++YLH I+H D+K +NI L ED
Sbjct: 107 ---YHHLHASET--KFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNT 158
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 159 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
Query: 524 MTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYA---RKMILVSLW 580
MTG+ +N+ R ++ E +G + + K + ++M +
Sbjct: 219 MTGQLPYSNIN--------------NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAE 264
Query: 581 CIQTNPSDRPSMNRVVEMLE 600
C++ +RPS R++ +E
Sbjct: 265 CLKKKRDERPSFPRILAEIE 284
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 31/260 (11%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + + A++ ++ SL
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSL 106
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H ET K + + L IA ARG++YLH I+H D+K +NI L ED
Sbjct: 107 ---YHHLHASET--KFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNT 158
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 159 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
Query: 524 MTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYA---RKMILVSLW 580
MTG+ +N+ R ++ E +G + + K + ++M +
Sbjct: 219 MTGQLPYSNIN--------------NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAE 264
Query: 581 CIQTNPSDRPSMNRVVEMLE 600
C++ +RPS R++ +E
Sbjct: 265 CLKKKRDERPSFPRILAEIE 284
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 101/178 (56%), Gaps = 15/178 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK+LNET G +F++E ++ H ++V LLG C + L+ + + +G L +
Sbjct: 47 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLE 105
Query: 408 FIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++HE K + + L W V IA+G+ YL R++H D+ N+L+
Sbjct: 106 YVHEHKDNIGSQLLLNW------CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHV 156
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLA++ EG E + G + I ++A E C ++ + +++SDV+SYG+ ++E+
Sbjct: 157 KITDFGLARLLEGDEKEYNADGGKMPIKWMALE--CIHYRKFTHQSDVWSYGVTIWEL 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 101/178 (56%), Gaps = 15/178 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK+LNET G +F++E ++ H ++V LLG C + L+ + + +G L +
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLE 128
Query: 408 FIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++HE K + + L W V IA+G+ YL R++H D+ N+L+
Sbjct: 129 YVHEHKDNIGSQLLLNW------CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHV 179
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLA++ EG E + G + I ++A E C ++ + +++SDV+SYG+ ++E+
Sbjct: 180 KITDFGLARLLEGDEKEYNADGGKMPIKWMALE--CIHYRKFTHQSDVWSYGVTIWEL 235
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 14/190 (7%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + + A++ ++ SL
Sbjct: 52 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSL 110
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H +ET K + L IA A+G++YLH I+H D+K +NI L ED
Sbjct: 111 ---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLT 162
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 163 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 222
Query: 524 MTGEKNNANV 533
MTG+ +N+
Sbjct: 223 MTGQLPYSNI 232
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 14/190 (7%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + + A++ ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSL 90
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H +ET K + L IA A+G++YLH I+H D+K +NI L ED
Sbjct: 91 ---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLT 142
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 143 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
Query: 524 MTGEKNNANV 533
MTG+ +N+
Sbjct: 203 MTGQLPYSNI 212
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 14/190 (7%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+VA+K+LN T + F NEV + +T HVNI+ +G+ + + A++ ++ SL
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSL 118
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H H +ET K + L IA A+G++YLH I+H D+K +NI L ED
Sbjct: 119 ---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLT 170
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI DFGLA G+I ++APEV ++ S++SDVY++G++++E
Sbjct: 171 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
Query: 524 MTGEKNNANV 533
MTG+ +N+
Sbjct: 231 MTGQLPYSNI 240
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 24/252 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E E+F+ E A + H N+V LLG C ++ E++ G+L +
Sbjct: 59 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + E VL +A I+ +EYL + +H D+ N L+ E+ K+
Sbjct: 119 LRECNREEVTAV----VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHVVKV 171
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+DFGL+++ G ++ + GA+ I + APE N S KSDV+++G++++E+
Sbjct: 172 ADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--TFSIKSDVWAFGVLLWEIATYG 228
Query: 529 NNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSD 588
+ +D S VY LE +G E+ + K+ + C + +P+D
Sbjct: 229 MSPYPGIDLSQ-------VYDLLE-------KGYRMEQPEGCPPKVYELMRACWKWSPAD 274
Query: 589 RPSMNRVVEMLE 600
RPS + E
Sbjct: 275 RPSFAETHQAFE 286
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S GSL F
Sbjct: 34 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDF 92
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ ET + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 93 LKG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 145
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 146 ADFGLARLIEDNEX-TARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 199
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VAIK L + E F+ E + + H +V L E ++ E++S GSL F+
Sbjct: 294 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL 352
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
ET + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K++
Sbjct: 353 KG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVA 405
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 406 DFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 458
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 38/267 (14%)
Query: 350 VAIKVL--NETKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L + T+ + D I+E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 407 KFIHEKHP--LE--------TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPH 456
+++ + P LE ++L + L A +ARG+EYL + + +H D+
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 457 NILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVY 515
N+L+ ED KI+DFGLA+ + T R + ++APE +F R + +++SDV+
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 236
Query: 516 SYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
S+G++++E+ G V V+ ++K L+ +G ++ +
Sbjct: 237 SFGVLLWEIFTLGGSPYPGVPVEE---------LFKLLK-------EGHRMDKPSNCTNE 280
Query: 574 MILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ ++ C PS RP+ ++VE L+
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S GSL F
Sbjct: 37 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 95
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ ET + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 96 LKG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 148
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 149 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 202
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 98/178 (55%), Gaps = 13/178 (7%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T+ DF+ E + + SH NI+ L G + +I E++ NG+L+K
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ EK + + L + GIA G++YL N +H D+ NIL++ + K
Sbjct: 136 FLREK-----DGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCK 187
Query: 468 ISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL+++ E E+ + +G + I + APE ++ + + SDV+S+G++++E+
Sbjct: 188 VSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI--SYRKFTSASDVWSFGIVMWEV 243
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VAIK L + E F+ E + + H +V L E ++ E++S GSL F+
Sbjct: 211 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL 269
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
ET + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K++
Sbjct: 270 KG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVA 322
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 323 DFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 375
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VAIK L + E F+ E + + H +V L E ++ E++S GSL F+
Sbjct: 211 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL 269
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
ET + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K++
Sbjct: 270 KG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVA 322
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 323 DFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 375
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 38/267 (14%)
Query: 350 VAIKVL--NETKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L + T+ + D I+E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 407 KFIHEKHP--LE--------TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPH 456
+++ + P LE ++L + L A +ARG+EYL + + +H D+
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 457 NILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVY 515
N+L+ ED KI+DFGLA+ + T R + ++APE +F R + +++SDV+
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 236
Query: 516 SYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
S+G++++E+ G V V+ ++K L+ +G ++ +
Sbjct: 237 SFGVLLWEIFTLGGSPYPGVPVEE---------LFKLLK-------EGHRMDKPSNCTNE 280
Query: 574 MILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ ++ C PS RP+ ++VE L+
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 38/267 (14%)
Query: 350 VAIKVL--NETKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L + T+ + D I+E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 407 KFIHEKHP--LE--------TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPH 456
+++ + P LE ++L + L A +ARG+EYL + + +H D+
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 168
Query: 457 NILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVY 515
N+L+ ED KI+DFGLA+ + T R + ++APE +F R + +++SDV+
Sbjct: 169 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 225
Query: 516 SYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
S+G++++E+ G V V+ ++K L+ +G ++ +
Sbjct: 226 SFGVLLWEIFTLGGSPYPGVPVEE---------LFKLLK-------EGHRMDKPSNCTNE 269
Query: 574 MILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ ++ C PS RP+ ++VE L+
Sbjct: 270 LYMMMRDCWHAVPSQRPTFKQLVEDLD 296
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 38/267 (14%)
Query: 350 VAIKVL--NETKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L + T+ + D I+E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 407 KFIHEKHP--LE--------TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPH 456
+++ + P LE ++L + L A +ARG+EYL + + +H D+
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 164
Query: 457 NILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVY 515
N+L+ ED KI+DFGLA+ + T R + ++APE +F R + +++SDV+
Sbjct: 165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 221
Query: 516 SYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
S+G++++E+ G V V+ ++K L+ +G ++ +
Sbjct: 222 SFGVLLWEIFTLGGSPYPGVPVEE---------LFKLLK-------EGHRMDKPSNCTNE 265
Query: 574 MILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ ++ C PS RP+ ++VE L+
Sbjct: 266 LYMMMRDCWHAVPSQRPTFKQLVEDLD 292
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 38/267 (14%)
Query: 350 VAIKVL--NETKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L + T+ + D I+E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 407 KFIHEKHP--LE--------TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPH 456
+++ + P LE ++L + L A +ARG+EYL + + +H D+
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 457 NILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVY 515
N+L+ ED KI+DFGLA+ + T R + ++APE +F R + +++SDV+
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 236
Query: 516 SYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
S+G++++E+ G V V+ ++K L+ +G ++ +
Sbjct: 237 SFGVLLWEIFTLGGSPYPGVPVEE---------LFKLLK-------EGHRMDKPSNCTNE 280
Query: 574 MILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ ++ C PS RP+ ++VE L+
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 38/267 (14%)
Query: 350 VAIKVL--NETKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L + T+ + D I+E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 407 KFIHEKHP--LE--------TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPH 456
+++ + P LE ++L + L A +ARG+EYL + + +H D+
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 457 NILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVY 515
N+L+ ED KI+DFGLA+ + T R + ++APE +F R + +++SDV+
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 236
Query: 516 SYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
S+G++++E+ G V V+ ++K L+ +G ++ +
Sbjct: 237 SFGVLLWEIFTLGGSPYPGVPVEE---------LFKLLK-------EGHRMDKPSNCTNE 280
Query: 574 MILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ ++ C PS RP+ ++VE L+
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VAIK L + E F+ E + + H +V L E ++ E++S GSL F+
Sbjct: 211 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFL 269
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
ET + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K++
Sbjct: 270 KG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVA 322
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 323 DFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 375
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 38/267 (14%)
Query: 350 VAIKVL--NETKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L + T+ + D I+E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 407 KFIHEKHP--LE--------TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPH 456
+++ + P LE ++L + L A +ARG+EYL + + +H D+
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 171
Query: 457 NILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVY 515
N+L+ ED KI+DFGLA+ + T R + ++APE +F R + +++SDV+
Sbjct: 172 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 228
Query: 516 SYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
S+G++++E+ G V V+ ++K L+ +G ++ +
Sbjct: 229 SFGVLLWEIFTLGGSPYPGVPVEE---------LFKLLK-------EGHRMDKPSNCTNE 272
Query: 574 MILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ ++ C PS RP+ ++VE L+
Sbjct: 273 LYMMMRDCWHAVPSQRPTFKQLVEDLD 299
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 38/267 (14%)
Query: 350 VAIKVL--NETKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L + T+ + D I+E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 407 KFIHEKHP--LE--------TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPH 456
+++ + P LE ++L + L A +ARG+EYL + + +H D+
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 172
Query: 457 NILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVY 515
N+L+ ED KI+DFGLA+ + T R + ++APE +F R + +++SDV+
Sbjct: 173 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 229
Query: 516 SYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
S+G++++E+ G V V+ ++K L+ +G ++ +
Sbjct: 230 SFGVLLWEIFTLGGSPYPGVPVEE---------LFKLLK-------EGHRMDKPSNCTNE 273
Query: 574 MILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ ++ C PS RP+ ++VE L+
Sbjct: 274 LYMMMRDCWHAVPSQRPTFKQLVEDLD 300
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 38/267 (14%)
Query: 350 VAIKVL--NETKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L + T+ + D I+E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 407 KFIHEKHP--LE--------TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPH 456
+++ + P LE ++L + L A +ARG+EYL + + +H D+
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 220
Query: 457 NILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVY 515
N+L+ ED KI+DFGLA+ + T R + ++APE +F R + +++SDV+
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 277
Query: 516 SYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
S+G++++E+ G V V+ ++K L+ +G ++ +
Sbjct: 278 SFGVLLWEIFTLGGSPYPGVPVEE---------LFKLLK-------EGHRMDKPSNCTNE 321
Query: 574 MILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ ++ C PS RP+ ++VE L+
Sbjct: 322 LYMMMRDCWHAVPSQRPTFKQLVEDLD 348
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S GSL F
Sbjct: 44 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDF 102
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 103 LKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 155
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 156 ADFGLARLIEDNEX-TARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 209
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 42/274 (15%)
Query: 348 QNVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
++VAIK + E++ + FI E+ +SR +H NIV L G C + L+ E+ GSL
Sbjct: 33 KDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN 89
Query: 408 FIHEKHPLE---TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL-DED 463
+H PL + W + ++G+ YLH ++H D+KP N+LL
Sbjct: 90 VLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 143
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVF 522
KI DFG A C+ + MT +G+ ++APEVF N+ E K DV+S+G++++
Sbjct: 144 TVLKICDFGTA--CDIQ---THMTNNKGSAAWMAPEVFEGSNYSE---KCDVFSWGIILW 195
Query: 523 EMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCI 582
E+ + + + I + R L ++L + IE+ + C
Sbjct: 196 EVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLP-KPIESLMTR------------CW 242
Query: 583 QTNPSDRPSMNRVVEML-------EGSLDSLQIP 609
+PS RPSM +V+++ G+ + LQ P
Sbjct: 243 SKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 276
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S GSL F
Sbjct: 35 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 93
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 94 LKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 146
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 147 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 200
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S GSL F
Sbjct: 44 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDF 102
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 103 LKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 155
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 156 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S GSL F
Sbjct: 44 RVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 103 LKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 155
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 156 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 209
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 42/274 (15%)
Query: 348 QNVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
++VAIK + E++ + FI E+ +SR +H NIV L G C + L+ E+ GSL
Sbjct: 32 KDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN 88
Query: 408 FIHEKHPLE---TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL-DED 463
+H PL + W + ++G+ YLH ++H D+KP N+LL
Sbjct: 89 VLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 142
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVF 522
KI DFG A C+ + MT +G+ ++APEVF N+ E K DV+S+G++++
Sbjct: 143 TVLKICDFGTA--CDIQ---THMTNNKGSAAWMAPEVFEGSNYSE---KCDVFSWGIILW 194
Query: 523 EMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCI 582
E+ + + + I + R L ++L + IE+ + C
Sbjct: 195 EVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLP-KPIESLMTR------------CW 241
Query: 583 QTNPSDRPSMNRVVEML-------EGSLDSLQIP 609
+PS RPSM +V+++ G+ + LQ P
Sbjct: 242 SKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 275
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S GSL F
Sbjct: 44 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 103 LKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 155
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 156 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 109/208 (52%), Gaps = 24/208 (11%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
+VA+K++ E + ++F E ++ + SH +V G C + + ++ E++SNG L +
Sbjct: 34 DVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY 93
Query: 409 I--HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ H K LE +Q L E+ Y + G+A LE + + +H D+ N L+D D C
Sbjct: 94 LRSHGK-GLEPSQLL--EMCYDVCEGMAF-LE------SHQFIHRDLAARNCLVDRDLCV 143
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
K+SDFG+ + + VS G + + + APEVF ++ + S KSDV+++G++++E+
Sbjct: 144 KVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVF--HYFKYSSKSDVWAFGILMWEVFS 200
Query: 527 ---------EKNNANVAVDRSSEIYFPH 545
+ + V + +Y PH
Sbjct: 201 LGKMPYDLYTNSEVVLKVSQGHRLYRPH 228
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S GSL F
Sbjct: 33 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 91
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 92 LKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 144
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 145 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 198
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 21/190 (11%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSH-VNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ AIK + E +K + DF E+ + + H NI+ LLG C L E+ +G+L
Sbjct: 44 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 103
Query: 406 EKFIHEKHPLETN----------QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKP 455
F+ + LET+ L + L A +ARG++YL + + +H D+
Sbjct: 104 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAA 160
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVY 515
NIL+ E++ KI+DFGL++ G+E V T R + ++A E N+ + SDV+
Sbjct: 161 RNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESL--NYSVYTTNSDVW 215
Query: 516 SYGMMVFEMT 525
SYG++++E+
Sbjct: 216 SYGVLLWEIV 225
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 21/190 (11%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSH-VNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ AIK + E +K + DF E+ + + H NI+ LLG C L E+ +G+L
Sbjct: 54 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 113
Query: 406 EKFIHEKHPLETN----------QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKP 455
F+ + LET+ L + L A +ARG++YL + + +H D+
Sbjct: 114 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAA 170
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVY 515
NIL+ E++ KI+DFGL++ G+E V T R + ++A E N+ + SDV+
Sbjct: 171 RNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESL--NYSVYTTNSDVW 225
Query: 516 SYGMMVFEMT 525
SYG++++E+
Sbjct: 226 SYGVLLWEIV 235
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E+++ GSL F
Sbjct: 41 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDF 99
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ ET + L+ L ++ IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 100 LKG----ETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 152
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 153 ADFGLARLIEDNE-WTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 206
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E+++ GSL F
Sbjct: 41 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDF 99
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ ET + L+ L ++ IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 100 LKG----ETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 152
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 153 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 206
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 42/265 (15%)
Query: 350 VAIK--VLNETKGNGE------DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVS 401
VAIK +L +++G E +F EV +S +H NIV L G R ++ EFV
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
Query: 402 NGSL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL 460
G L + + + HP+ KW V ++ + IA G+EY+ + N I+H D++ NI L
Sbjct: 105 CGDLYHRLLDKAHPI------KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFL 157
Query: 461 ---DED--FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVY 515
DE+ C K++DFGL++ +S+ S++G G ++APE + K+D Y
Sbjct: 158 QSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 516 SYGMMVFE-MTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
S+ M+++ +TGE F + Y +++ + +G+ ++ ++
Sbjct: 213 SFAMILYTILTGEGP-------------FDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEML 599
V C +P RP + +V+ L
Sbjct: 260 RNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S GSL F
Sbjct: 44 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDF 102
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 103 LKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 155
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 156 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 209
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 96/178 (53%), Gaps = 13/178 (7%)
Query: 350 VAIKVL--NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T+ DF+ E + + + H N+V L G G ++ EF+ NG+L+
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ KH + + L + GIA G+ YL + +H D+ NIL++ + K
Sbjct: 134 FLR-KH----DGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCK 185
Query: 468 ISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL+++ E E++ + TG + + + APE + + + SDV+SYG++++E+
Sbjct: 186 VSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI--QYRKFTSASDVWSYGIVMWEV 241
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 136/271 (50%), Gaps = 38/271 (14%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+TLLG C + +I E+ S G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNL 128
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDV 242
Query: 515 YSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYAR 572
+S+G++++E+ G + V+ ++K L+ +G ++
Sbjct: 243 WSFGVLMWEIFTLGGSPYPGIPVEE---------LFKLLK-------EGHRMDKPANCTN 286
Query: 573 KMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
++ ++ C PS RP+ ++VE L+ L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S GSL F
Sbjct: 44 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + L+ L +A IA G+ Y+ R +H D+ NIL+ E+ K+
Sbjct: 103 LKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKV 155
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 156 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 209
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 145/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E++ NGSL+
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 135 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGLA++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 187 KVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 245 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 289 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 338
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VAIK L + E F+ E + + H +V L E ++ E++S GSL F+
Sbjct: 212 VAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL 270
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
E + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K++
Sbjct: 271 KG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVA 323
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGL ++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 324 DFGLGRLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 376
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T+ DF++E + + + H NI+ L G G ++ E++ NGSL+
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + L + G+ G+ YL + +H D+ N+L+D + K
Sbjct: 140 FLRTH-----DGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCK 191
Query: 468 ISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT- 525
+SDFGL+++ E ++ + TG + I + APE F S SDV+S+G++++E+
Sbjct: 192 VSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMWEVLA 249
Query: 526 -GEKNNANV 533
GE+ N+
Sbjct: 250 YGERPYWNM 258
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 145/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E++ NGSL+
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 135 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVC 186
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL+++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 245 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 289 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 338
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T+ DF++E + + + H NI+ L G G ++ E++ NGSL+
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + L + G+ G+ YL + +H D+ N+L+D + K
Sbjct: 140 FLRTH-----DGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCK 191
Query: 468 ISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT- 525
+SDFGL+++ E ++ + TG + I + APE F S SDV+S+G++++E+
Sbjct: 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMWEVLA 249
Query: 526 -GEKNNANV 533
GE+ N+
Sbjct: 250 YGERPYWNM 258
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 105/190 (55%), Gaps = 20/190 (10%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 129 REYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVY---THQSDV 242
Query: 515 YSYGMMVFEM 524
+S+G++++E+
Sbjct: 243 WSFGVLMWEI 252
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 105/190 (55%), Gaps = 20/190 (10%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVY---THQSDV 242
Query: 515 YSYGMMVFEM 524
+S+G++++E+
Sbjct: 243 WSFGVLMWEI 252
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 49/266 (18%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T+ DF++E + + + H N++ L G + +I EF+ NGSL+
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + + L + GIA G++YL + +H D+ NIL++ + K
Sbjct: 124 FLR-----QNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCK 175
Query: 468 ISDFGLAKICEGRESIVSMTGARG---TIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL++ E S + T A G I + APE + + + SDV+SYG++++E+
Sbjct: 176 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI--QYRKFTSASDVWSYGIVMWEV 233
Query: 525 T--GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY--------ARKM 574
GE+ P+W D+ Q + N +++Y +
Sbjct: 234 MSYGER---------------PYW---------DMTNQDVINAIEQDYRLPPPMDCPSAL 269
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ L C Q + + RP ++V L+
Sbjct: 270 HQLMLDCWQKDRNHRPKFGQIVNTLD 295
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S G L F
Sbjct: 44 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDF 102
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 103 LKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 155
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 156 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 209
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 21/190 (11%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSH-VNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ AIK + E +K + DF E+ + + H NI+ LLG C L E+ +G+L
Sbjct: 51 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 110
Query: 406 EKFIHEKHPLETN----------QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKP 455
F+ + LET+ L + L A +ARG++YL + + +H ++
Sbjct: 111 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAA 167
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVY 515
NIL+ E++ KI+DFGL++ G+E V T R + ++A E N+ + SDV+
Sbjct: 168 RNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESL--NYSVYTTNSDVW 222
Query: 516 SYGMMVFEMT 525
SYG++++E+
Sbjct: 223 SYGVLLWEIV 232
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VAIK L + E F+ E + + H +V L E ++ E++S G L F
Sbjct: 44 RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDF 102
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ E + L+ L +A IA G+ Y+ R +H D++ NIL+ E+ K+
Sbjct: 103 LKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 155
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+T
Sbjct: 156 ADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELT 209
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 145/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVL--NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E++ NGSL+
Sbjct: 73 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 133 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 184
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL+++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 185 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 242
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 243 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 286
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 287 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 336
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 145/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E++ NGSL+
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 135 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL+++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 245 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 289 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 338
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 145/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVL--NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E++ NGSL+
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 135 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL+++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 245 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 289 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 338
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 145/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E++ NGSL+
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 135 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL+++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 245 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 289 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 338
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 145/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E++ NGSL+
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 135 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL+++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 245 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 289 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 338
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 144/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVL--NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E++ NGSL+
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 135 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL ++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 245 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 289 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 338
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 42/265 (15%)
Query: 350 VAIK--VLNETKGNGE------DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVS 401
VAIK +L +++G E +F EV +S +H NIV L G R ++ EFV
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
Query: 402 NGSL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL 460
G L + + + HP+ KW V ++ + IA G+EY+ + N I+H D++ NI L
Sbjct: 105 CGDLYHRLLDKAHPI------KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFL 157
Query: 461 ---DED--FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVY 515
DE+ C K++DFG ++ +S+ S++G G ++APE + K+D Y
Sbjct: 158 QSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 516 SYGMMVFE-MTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
S+ M+++ +TGE F + Y +++ + +G+ ++ ++
Sbjct: 213 SFAMILYTILTGEGP-------------FDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEML 599
V C +P RP + +V+ L
Sbjct: 260 RNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 145/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E++ NGSL+
Sbjct: 63 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 123 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 174
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL+++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 175 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 232
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 233 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 276
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 277 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 326
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 105/190 (55%), Gaps = 20/190 (10%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 115 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 174
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 231
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDV 288
Query: 515 YSYGMMVFEM 524
+S+G++++E+
Sbjct: 289 WSFGVLMWEI 298
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 43/262 (16%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T DF++E + + + H NI+ L G + +I E++ NGSL+
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + + L + GI G++YL + +H D+ NIL++ + K
Sbjct: 120 FLR-----KNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCK 171
Query: 468 ISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT- 525
+SDFG++++ E E+ + G + I + APE + + + SDV+SYG++++E+
Sbjct: 172 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMS 229
Query: 526 -GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN------EEDKEYARKMILVS 578
GE+ P+W ++ ++ IE D A +++
Sbjct: 230 YGER---------------PYW-----DMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD 269
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
W Q SDRP ++V ML+
Sbjct: 270 CW--QKERSDRPKFGQIVNMLD 289
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 145/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E++ NGSL+
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 106 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 157
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL+++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 215
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 216 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 259
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 260 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 309
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 135/271 (49%), Gaps = 38/271 (14%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 56 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTA 172
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDV 229
Query: 515 YSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYAR 572
+S+G++++E+ G + V+ ++K L+ +G ++
Sbjct: 230 WSFGVLMWEIFTLGGSPYPGIPVEE---------LFKLLK-------EGHRMDKPANCTN 273
Query: 573 KMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
++ ++ C PS RP+ ++VE L+ L
Sbjct: 274 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 304
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 106/190 (55%), Gaps = 20/190 (10%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + + T R + ++APE +F R + +++SDV
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVY---THQSDV 242
Query: 515 YSYGMMVFEM 524
+S+G++++E+
Sbjct: 243 WSFGVLMWEI 252
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 135/271 (49%), Gaps = 38/271 (14%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 61 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 177
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDV 234
Query: 515 YSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYAR 572
+S+G++++E+ G + V+ ++K L+ +G ++
Sbjct: 235 WSFGVLMWEIFTLGGSPYPGIPVEE---------LFKLLK-------EGHRMDKPANCTN 278
Query: 573 KMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
++ ++ C PS RP+ ++VE L+ L
Sbjct: 279 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 309
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 42/265 (15%)
Query: 350 VAIK--VLNETKGNGE------DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVS 401
VAIK +L +++G E +F EV +S +H NIV L G R ++ EFV
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
Query: 402 NGSL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL 460
G L + + + HP+ KW V ++ + IA G+EY+ + N I+H D++ NI L
Sbjct: 105 CGDLYHRLLDKAHPI------KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFL 157
Query: 461 ---DED--FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVY 515
DE+ C K++DF L++ +S+ S++G G ++APE + K+D Y
Sbjct: 158 QSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 516 SYGMMVFE-MTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
S+ M+++ +TGE F + Y +++ + +G+ ++ ++
Sbjct: 213 SFAMILYTILTGEGP-------------FDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEML 599
V C +P RP + +V+ L
Sbjct: 260 RNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 43/262 (16%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T DF++E + + + H NI+ L G + +I E++ NGSL+
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + + L + GI G++YL + +H D+ NIL++ + K
Sbjct: 105 FLR-----KNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCK 156
Query: 468 ISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT- 525
+SDFG++++ E E+ + G + I + APE + + + SDV+SYG++++E+
Sbjct: 157 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMS 214
Query: 526 -GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN------EEDKEYARKMILVS 578
GE+ P+W ++ ++ IE D A +++
Sbjct: 215 YGER---------------PYW-----DMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD 254
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
W Q SDRP ++V ML+
Sbjct: 255 CW--QKERSDRPKFGQIVNMLD 274
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 135/271 (49%), Gaps = 38/271 (14%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 58 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 174
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDV 231
Query: 515 YSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYAR 572
+S+G++++E+ G + V+ ++K L+ +G ++
Sbjct: 232 WSFGVLMWEIFTLGGSPYPGIPVEE---------LFKLLK-------EGHRMDKPANCTN 275
Query: 573 KMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
++ ++ C PS RP+ ++VE L+ L
Sbjct: 276 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 306
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 43/262 (16%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T DF++E + + + H NI+ L G + +I E++ NGSL+
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + + L + GI G++YL + +H D+ NIL++ + K
Sbjct: 99 FLR-----KNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCK 150
Query: 468 ISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT- 525
+SDFG++++ E E+ + G + I + APE + + + SDV+SYG++++E+
Sbjct: 151 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMS 208
Query: 526 -GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN------EEDKEYARKMILVS 578
GE+ P+W ++ ++ IE D A +++
Sbjct: 209 YGER---------------PYW-----DMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD 248
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
W Q SDRP ++V ML+
Sbjct: 249 CW--QKERSDRPKFGQIVNMLD 268
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 105/190 (55%), Gaps = 20/190 (10%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 69 TVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDV 242
Query: 515 YSYGMMVFEM 524
+S+G++++E+
Sbjct: 243 WSFGVLMWEI 252
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 135/271 (49%), Gaps = 38/271 (14%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNL 128
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDV 242
Query: 515 YSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYAR 572
+S+G++++E+ G + V+ ++K L+ +G ++
Sbjct: 243 WSFGVLMWEIFTLGGSPYPGIPVEE---------LFKLLK-------EGHRMDKPANCTN 286
Query: 573 KMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
++ ++ C PS RP+ ++VE L+ L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 29/267 (10%)
Query: 349 NVAIKVL---NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRAL-----IYEFV 400
VA+K + N ++ E+F++E A + SH N++ LLG C E + + I F+
Sbjct: 64 KVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 401 SNGSLEKFIHEKHPLETNQK-LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
G L ++ LET K + + L K V IA G+EYL N LH D+ N +
Sbjct: 124 KYGDLHTYLLYSR-LETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCM 179
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
L +D ++DFGL+K + A+ + +IA E + KSDV+++G+
Sbjct: 180 LRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRV--YTSKSDVWAFGV 237
Query: 520 MVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSL 579
++E+ V ++ E+Y D L G ++ ++ ++ +
Sbjct: 238 TMWEIATRGMTPYPGV-QNHEMY-------------DYLLHGHRLKQPEDCLDELYEIMY 283
Query: 580 WCIQTNPSDRPSMNRVVEMLEGSLDSL 606
C +T+P DRP+ + + LE L+SL
Sbjct: 284 SCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 144/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E + NGSL+
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 135 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVC 186
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL+++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 245 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 289 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 338
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 105/190 (55%), Gaps = 20/190 (10%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I E+ S G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ +I+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 186 RNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDV 242
Query: 515 YSYGMMVFEM 524
+S+G++++E+
Sbjct: 243 WSFGVLMWEI 252
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
+VAIK++ E + ++FI E + SH +V L G C + +I E+++NG L +
Sbjct: 50 DVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 409 IHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E +H +T Q L ++ + +EYL + + LH D+ N L+++ K
Sbjct: 110 LREMRHRFQTQQ------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVK 160
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL++ E S G++ + + PEV + + S KSD++++G++++E+
Sbjct: 161 VSDFGLSRYVLDDEE-TSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 144/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVL--NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E + NGSL+
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 135 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL+++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 245 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 289 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 338
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 144/297 (48%), Gaps = 41/297 (13%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIK L T+ DF+ E + + + H NI+ L G + ++ E + NGSL+
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ KH + + L + GIA G++YL + +H D+ NIL++ +
Sbjct: 106 SFLR-KH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVC 157
Query: 467 KISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K+SDFGL+++ E E+ + G + I + +PE + + + SDV+SYG++++E+
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 215
Query: 526 --GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQ 583
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 216 SYGER---------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQ 259
Query: 584 TNPSDRPSMNRVVEMLEGSL---DSLQIPPRPFLLSSGSQPDFSSILVRQTESSMAT 637
+ ++RP ++V +L+ + SL+I + S+ ++P S++L+ Q+ + T
Sbjct: 260 KDRNNRPKFEQIVSILDKLIRNPGSLKI-----ITSAAARP--SNLLLDQSNVDITT 309
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
+VAIK++ E + ++FI E + SH +V L G C + +I E+++NG L +
Sbjct: 30 DVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 89
Query: 409 IHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E +H +T Q L ++ + +EYL + + LH D+ N L+++ K
Sbjct: 90 LREMRHRFQTQQ------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVK 140
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL++ E S G++ + + PEV + + S KSD++++G++++E+
Sbjct: 141 VSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 194
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
+VAIK++ E + ++FI E + SH +V L G C + +I E+++NG L +
Sbjct: 34 DVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 93
Query: 409 IHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E +H +T Q L ++ + +EYL + + LH D+ N L+++ K
Sbjct: 94 LREMRHRFQTQQ------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVK 144
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL++ E S G++ + + PEV + + S KSD++++G++++E+
Sbjct: 145 VSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 198
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L + + F+ E + H +V L +I E+++ GSL F
Sbjct: 39 KVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDF 98
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ + K+ L + IA G+ Y+ R +H D++ N+L+ E KI
Sbjct: 99 LKS----DEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKI 151
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE NFG + KSDV+S+G++++E+
Sbjct: 152 ADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGCFTIKSDVWSFGILLYEIV 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
+VAIK++ E + ++FI E + SH +V L G C + +I E+++NG L +
Sbjct: 50 DVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 409 IHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E +H +T Q L ++ + +EYL + + LH D+ N L+++ K
Sbjct: 110 LREMRHRFQTQQ------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVK 160
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL++ E S G++ + + PEV + + S KSD++++G++++E+
Sbjct: 161 VSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
+VAIK++ E + ++FI E + SH +V L G C + +I E+++NG L +
Sbjct: 35 DVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 409 IHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E +H +T Q L ++ + +EYL + + LH D+ N L+++ K
Sbjct: 95 LREMRHRFQTQQ------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVK 145
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL++ E S G++ + + PEV + + S KSD++++G++++E+
Sbjct: 146 VSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 199
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 31/256 (12%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T+ DF+ E + + + H NI+ L G + ++ E++ NGSL+
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + + L + GI+ G++YL + +H D+ NIL++ + K
Sbjct: 113 FLK-----KNDGQFTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCK 164
Query: 468 ISDFGLAKICEGR-ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT- 525
+SDFGL+++ E E+ + G + I + APE F + + SDV+SYG++++E+
Sbjct: 165 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--FRKFTSASDVWSYGIVMWEVVS 222
Query: 526 -GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQT 584
GE+ P+W ++ + + +G + + + L C Q
Sbjct: 223 YGER---------------PYWEMTNQDVIKAVE-EGYRLPSPMDCPAALYQLMLDCWQK 266
Query: 585 NPSDRPSMNRVVEMLE 600
+ RP + +V ML+
Sbjct: 267 ERNSRPKFDEIVNMLD 282
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 49/266 (18%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T+ DF++E + + + H N++ L G + +I EF+ NGSL+
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + + L + GIA G++YL + +H + NIL++ + K
Sbjct: 98 FLR-----QNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCK 149
Query: 468 ISDFGLAKICEGRESIVSMTGARG---TIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL++ E S + T A G I + APE + + + SDV+SYG++++E+
Sbjct: 150 VSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI--QYRKFTSASDVWSYGIVMWEV 207
Query: 525 T--GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY--------ARKM 574
GE+ P+W D+ Q + N +++Y +
Sbjct: 208 MSYGER---------------PYW---------DMTNQDVINAIEQDYRLPPPMDCPSAL 243
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ L C Q + + RP ++V L+
Sbjct: 244 HQLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
+VAIK++ E + ++FI E + SH +V L G C + +I E+++NG L +
Sbjct: 41 DVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 100
Query: 409 IHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E +H +T Q L ++ + +EYL + + LH D+ N L+++ K
Sbjct: 101 LREMRHRFQTQQ------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVK 151
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL++ E S G++ + + PEV + + S KSD++++G++++E+
Sbjct: 152 VSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 205
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
+VAIK++ E + ++FI E + SH +V L G C + +I E+++NG L +
Sbjct: 35 DVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 409 IHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E +H +T Q L ++ + +EYL + + LH D+ N L+++ K
Sbjct: 95 LREMRHRFQTQQ------LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVK 145
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL++ E S G++ + + PEV + + S KSD++++G++++E+
Sbjct: 146 VSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 199
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 134/271 (49%), Gaps = 38/271 (14%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I + S G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNL 128
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDV 242
Query: 515 YSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYAR 572
+S+G++++E+ G + V+ ++K L+ +G ++
Sbjct: 243 WSFGVLMWEIFTLGGSPYPGIPVEE---------LFKLLK-------EGHRMDKPANCTN 286
Query: 573 KMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
++ ++ C PS RP+ ++VE L+ L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L + + F+ E + H +V L + +I EF++ GSL F
Sbjct: 38 KVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDF 97
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ + K+ L + IA G+ Y+ R +H D++ N+L+ E KI
Sbjct: 98 LKS----DEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKI 150
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE NFG + KS+V+S+G++++E+
Sbjct: 151 ADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGCFTIKSNVWSFGILLYEIV 204
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 133/268 (49%), Gaps = 38/268 (14%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + T+ + D ++E+ + H NI+ LLG C + +I + S G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNL 128
Query: 406 EKFIHEKHP------LETNQKLKWEVLYKIAVG----IARGLEYLHRGCNTRILHFDIKP 455
+++ + P + N+ + ++ +K V +ARG+EYL + + +H D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
N+L+ E+ KI+DFGLA+ + T R + ++APE +F R + +++SDV
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSDV 242
Query: 515 YSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYAR 572
+S+G++++E+ G + V+ ++K L+ +G ++
Sbjct: 243 WSFGVLMWEIFTLGGSPYPGIPVEE---------LFKLLK-------EGHRMDKPANCTN 286
Query: 573 KMILVSLWCIQTNPSDRPSMNRVVEMLE 600
++ ++ C PS RP+ ++VE L+
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 22/174 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
E+ E + H NI+ L G C + L+ EF G L + + + +++
Sbjct: 51 ENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL-------SGKRIP 103
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF--------CPKISDFGLA 474
++L AV IARG+ YLH I+H D+K NIL+ + KI+DFGLA
Sbjct: 104 PDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
Query: 475 KICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE-MTGE 527
+ E + + A G ++APEV + S SDV+SYG++++E +TGE
Sbjct: 164 R--EWHRT--TKMSAAGAYAWMAPEVIRASM--FSKGSDVWSYGVLLWELLTGE 211
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 38/275 (13%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGCNTRILHFDI 453
+L ++ K K+ E LYK + +A+G+E+L + + +H D+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKS 512
NILL E KI DFGLA+ V AR + ++APE +F R + + +S
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY---TIQS 231
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+S+G++++E+ G V +D +RL+ +G
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYT 276
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDS 605
+M L C PS RP+ + +VE L L +
Sbjct: 277 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VAIK L + E F+ E + + H +V L E ++ E+++ GSL F+
Sbjct: 36 VAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFL 94
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
+ + LK L +A +A G+ Y+ R +H D++ NIL+ KI+
Sbjct: 95 KDGE----GRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLICKIA 147
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE +G + KSDV+S+G+++ E+
Sbjct: 148 DFGLARLIEDNEX-TARQGAKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELV 200
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 34/265 (12%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 404 SLEKFIHEKH----PLETNQK--LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 457
+L ++ K P + K L E L + +A+G+E+L + + +H D+ N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARN 174
Query: 458 ILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVYS 516
ILL E KI DFGLA+ V AR + ++APE +F R + + +SDV+S
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWS 231
Query: 517 YGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
+G++++E+ G V +D +RL+ +G +M
Sbjct: 232 FGVLLWEIFSLGASPYPGVKIDEE--------FXRRLK-------EGTRMRAPDYTTPEM 276
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEML 599
L C PS RP+ + +VE L
Sbjct: 277 YQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 38/275 (13%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGCNTRILHFDI 453
+L ++ K K+ E LYK + +A+G+E+L + + +H D+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKS 512
NILL E KI DFGLA+ V AR + ++APE +F R + + +S
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY---TIQS 222
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+S+G++++E+ G V +D +RL+ +G
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYT 267
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDS 605
+M L C PS RP+ + +VE L L +
Sbjct: 268 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 38/275 (13%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGCNTRILHFDI 453
+L ++ K K+ E LYK + +A+G+E+L + + +H D+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKS 512
NILL E KI DFGLA+ V AR + ++APE +F R + + +S
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQS 231
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+S+G++++E+ G V +D +RL+ +G
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYT 276
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDS 605
+M L C PS RP+ + +VE L L +
Sbjct: 277 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 38/275 (13%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGCNTRILHFDI 453
+L ++ K K+ E LYK + +A+G+E+L + + +H D+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKS 512
NILL E KI DFGLA+ V AR + ++APE +F R + + +S
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVY---TIQS 231
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+S+G++++E+ G V +D +RL+ +G
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYT 276
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDS 605
+M L C PS RP+ + +VE L L +
Sbjct: 277 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G++YL + + +H D+ N +LDE F
Sbjct: 140 FIRNETH----NPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 190
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 191 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 248
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 38/275 (13%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGCNTRILHFDI 453
+L ++ K K+ E LYK + +A+G+E+L + + +H D+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKS 512
NILL E KI DFGLA+ V AR + ++APE +F R + + +S
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY---TIQS 222
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+S+G++++E+ G V +D +RL+ +G
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYT 267
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDS 605
+M L C PS RP+ + +VE L L +
Sbjct: 268 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 37/274 (13%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 404 SLEKFIHEKH----PLETNQKL-----KWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
+L ++ K P +T + L E L + +A+G+E+L + + +H D+
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 455 PHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSD 513
NILL E KI DFGLA+ V AR + ++APE +F R + + +SD
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY---TIQSD 232
Query: 514 VYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYA 571
V+S+G++++E+ G V +D +RL+ +G
Sbjct: 233 VWSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYTT 277
Query: 572 RKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDS 605
+M L C PS RP+ + +VE L L +
Sbjct: 278 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G++YL + + +H D+ N +LDE F
Sbjct: 141 FIRNETH----NPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 191
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 192 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 249
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G++YL + + +H D+ N +LDE F
Sbjct: 114 FIRNETH----NPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 164
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 165 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 222
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G++YL + + +H D+ N +LDE F
Sbjct: 121 FIRNETH----NPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 171
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 172 KVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 46 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 104
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 105 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 157
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 158 DFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 210
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 38/275 (13%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGCNTRILHFDI 453
+L ++ K K+ E LYK + +A+G+E+L + + +H D+
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 211
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKS 512
NILL E KI DFGLA+ V AR + ++APE +F R + + +S
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQS 268
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+S+G++++E+ G V +D +RL+ +G
Sbjct: 269 DVWSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYT 313
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDS 605
+M L C PS RP+ + +VE L L +
Sbjct: 314 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G++YL + + +H D+ N +LDE F
Sbjct: 122 FIRNETH----NPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 173 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 230
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 48 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 106
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 107 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 159
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 160 DFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 212
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 42/275 (15%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGCNTRILHFDI 453
+L ++ K N+ + ++ LYK + +A+G+E+L + + +H D+
Sbjct: 118 NLSTYLRSKR----NEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDL 170
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKS 512
NILL E KI DFGLA+ V AR + ++APE +F R + + +S
Sbjct: 171 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQS 227
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+S+G++++E+ G V +D +RL+ +G
Sbjct: 228 DVWSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYT 272
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDS 605
+M L C PS RP+ + +VE L L +
Sbjct: 273 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 38/275 (13%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGCNTRILHFDI 453
+L ++ K K+ E LYK + +A+G+E+L + + +H D+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKS 512
NILL E KI DFGLA+ V AR + ++APE +F R + + +S
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQS 222
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+S+G++++E+ G V +D +RL+ +G
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYT 267
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDS 605
+M L C PS RP+ + +VE L L +
Sbjct: 268 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 18/180 (10%)
Query: 350 VAIKVL----NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VAIK + E + + F EV + S+ SH NIV+++ E L+ E++ +L
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL 98
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++I PL + + + I G+++ H + RI+H DIKP NIL+D +
Sbjct: 99 SEYIESHGPLSVDTAINF------TNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKT 149
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYK-SDVYSYGMMVFEM 524
KI DFG+AK S+ GT+ Y +PE + GE + + +D+YS G++++EM
Sbjct: 150 LKIFDFGIAKAL-SETSLTQTNHVLGTVQYFSPE---QAKGEATDECTDIYSIGIVLYEM 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 27/265 (10%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 49 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 107
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 108 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 160
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKN 529
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 161 DFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTH-- 215
Query: 530 NANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDR 589
I +P + + G + + + E +++ + C + P DR
Sbjct: 216 ---------GRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 263
Query: 590 PSMNRVVEMLEGSLDSL--QIPPRP 612
P+ + + +LE + Q P+P
Sbjct: 264 PTFDYLRSVLEDFFTATEGQFQPQP 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G++YL + + +H D+ N +LDE F
Sbjct: 119 FIRNETH----NPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 169
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 170 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 227
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G++YL + + +H D+ N +LDE F
Sbjct: 121 FIRNETH----NPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 171
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 172 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 229
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 38/275 (13%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGCNTRILHFDI 453
+L ++ K K+ E LYK + +A+G+E+L + + +H D+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKS 512
NILL E KI DFGLA+ V AR + ++APE +F R + + +S
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQS 222
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+S+G++++E+ G V +D +RL+ +G
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYT 267
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDS 605
+M L C PS RP+ + +VE L L +
Sbjct: 268 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ K P + KL L +A IA G+ ++ +H D++ NIL+ + KI
Sbjct: 98 L--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKI 150
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 151 ADFGLARLIEDAEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G++YL + + +H D+ N +LDE F
Sbjct: 122 FIRNETH----NPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 173 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 230
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 40 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 98
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 99 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 151
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 152 DFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G++YL + + +H D+ N +LDE F
Sbjct: 120 FIRNETH----NPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 170
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 171 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G++YL + + +H D+ N +LDE F
Sbjct: 117 FIRNETH----NPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 167
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 168 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 225
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 42 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 100
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 101 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 153
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 154 DFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 206
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 46 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 104
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 105 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 157
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 158 DFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 41 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 99
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 100 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 152
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 153 DFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 40 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 98
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 99 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 151
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 152 DFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 45 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 103
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 104 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 156
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 157 DFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 50 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 108
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 109 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 161
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 162 DFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 214
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 16/178 (8%)
Query: 350 VAIKVLNET--KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K ET F+ E + + SH NIV L+G C + ++ E V G
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + +L+ + L ++ A G+EYL C +H D+ N L+ E K
Sbjct: 202 FLRTE-----GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLK 253
Query: 468 ISDFGLAKICEGRESIVSMTGA--RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
ISDFG+++ E + + + +G + + + APE N+G S +SDV+S+G++++E
Sbjct: 254 ISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEAL--NYGRYSSESDVWSFGILLWE 307
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 123/275 (44%), Gaps = 38/275 (13%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGCNTRILHFDI 453
+L ++ K K E LYK + +A+G+E+L + + +H D+
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 176
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKS 512
NILL E KI DFGLA+ V AR + ++APE +F R + + +S
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQS 233
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+S+G++++E+ G V +D +RL+ +G
Sbjct: 234 DVWSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYT 278
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDS 605
+M L C PS RP+ + +VE L L +
Sbjct: 279 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 313
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 40 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 98
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 99 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 151
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 152 DFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 35 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 93
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H D++ NIL+ + KI+
Sbjct: 94 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIA 146
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 147 DFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 199
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 36/267 (13%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 404 SLEKFIHEKH----PLETNQK----LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKP 455
+L ++ K P + L E L + +A+G+E+L + + +H D+
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAA 176
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDV 514
NILL E KI DFGLA+ V AR + ++APE +F R + + +SDV
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY---TIQSDV 233
Query: 515 YSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYAR 572
+S+G++++E+ G V +D +RL+ +G
Sbjct: 234 WSFGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYTTP 278
Query: 573 KMILVSLWCIQTNPSDRPSMNRVVEML 599
+M L C PS RP+ + +VE L
Sbjct: 279 EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 16/178 (8%)
Query: 350 VAIKVLNET--KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K ET F+ E + + SH NIV L+G C + ++ E V G
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + +L+ + L ++ A G+EYL C +H D+ N L+ E K
Sbjct: 202 FLRTE-----GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLK 253
Query: 468 ISDFGLAKICEGRESIVSMTGA--RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
ISDFG+++ E + + + +G + + + APE N+G S +SDV+S+G++++E
Sbjct: 254 ISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEAL--NYGRYSSESDVWSFGILLWE 307
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G+++L + + +H D+ N +LDE F
Sbjct: 181 FIRNETH----NPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 231
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 232 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 289
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI EF+ GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 105 EYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 156
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G+++L + + +H D+ N +LDE F
Sbjct: 120 FIRNETH----NPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 170
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 171 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 228
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G+++L + + +H D+ N +LDE F
Sbjct: 122 FIRNETH----NPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 173 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G+++L + + +H D+ N +LDE F
Sbjct: 122 FIRNETH----NPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 173 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G+++L + + +H D+ N +LDE F
Sbjct: 127 FIRNETH----NPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 177
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 178 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 235
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G+++L + + +H D+ N +LDE F
Sbjct: 123 FIRNETH----NPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 173
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 174 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 17/180 (9%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSNGSLEK 407
A+K LN GE F+ E + SH N+++LLG C L+ ++ +G L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 408 FI-HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
FI +E H N +K L + +A+G+++L + + +H D+ N +LDE F
Sbjct: 123 FIRNETH----NPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 173
Query: 467 KISDFGLAKICEGRE--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K++DFGLA+ +E S+ + TGA+ + ++A E + + KSDV+S+G++++E+
Sbjct: 174 KVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWEL 231
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 20/181 (11%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIKVL + K + E+ + E + + + IV L+G C + L+ E G L
Sbjct: 39 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLH 97
Query: 407 KFI---HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
KF+ E+ P+ E+L+++++G ++YL +H D+ N+LL
Sbjct: 98 KFLVGKREEIPVSNVA----ELLHQVSMG----MKYLE---EKNFVHRDLAARNVLLVNR 146
Query: 464 FCPKISDFGLAKICEGRESIVSMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KISDFGL+K +S + A + + + APE C NF + S +SDV+SYG+ ++
Sbjct: 147 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--CINFRKFSSRSDVWSYGVTMW 204
Query: 523 E 523
E
Sbjct: 205 E 205
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 133 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 184
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 185 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 241
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 106 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 157
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 158 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 214
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 108 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 159
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 160 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 105 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 156
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 101 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 152
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 153 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 209
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 100 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 151
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 152 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 208
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
Q VAIK L + K G E+F +E +R H N+V LLG + ++I+ + S+G
Sbjct: 57 QAVAIKTLKD-KAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 115
Query: 405 LEKFIHEKHP----------LETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
L +F+ + P L+ + IA G+EYL + ++H D+
Sbjct: 116 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLA 172
Query: 455 PHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDV 514
N+L+ + KISD GL + + + + I ++APE +G+ S SD+
Sbjct: 173 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDI 230
Query: 515 YSYGMMVFEM--------TGEKNNANVAVDRSSEIY-----FPHWVY 548
+SYG++++E+ G N V + R+ ++ P WVY
Sbjct: 231 WSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVY 277
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 107 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 158
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 159 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 215
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
VA+K L + + + F+ E + + H +V L + +I E++ NGSL F+
Sbjct: 36 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL 94
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
K P + KL L +A IA G+ ++ +H +++ NIL+ + KI+
Sbjct: 95 --KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIA 147
Query: 470 DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
DFGLA++ E E + GA+ I + APE N+G + KSDV+S+G+++ E+
Sbjct: 148 DFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 200
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 102 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 153
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 154 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 109 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 160
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 161 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 217
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 49/266 (18%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T+ +F++E + + + H NI+ L G ++ EF+ NG+L+
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ L Q + L + GIA G+ YL +H D+ NIL++ + K
Sbjct: 105 FLR----LNDGQFTVIQ-LVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCK 156
Query: 468 ISDFGLAKICEGRESIVSMT---GARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL++ E S + T G + I + APE F + + SD +SYG++++E+
Sbjct: 157 VSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEV 214
Query: 525 T--GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY--------ARKM 574
GE+ P+W D+ Q + N +++Y +
Sbjct: 215 MSFGER---------------PYW---------DMSNQDVINAIEQDYRLPPPPDCPTSL 250
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ L C Q + + RP +VV L+
Sbjct: 251 HQLMLDCWQKDRNARPRFPQVVSALD 276
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 77 QVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 190
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 191 PGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 247
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 248 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 293
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 294 TQCWQHQPEDRPNFAIILERIE 315
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 102 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 153
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 154 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 49/266 (18%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK L T+ +F++E + + + H NI+ L G ++ EF+ NG+L+
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ L Q + L + GIA G+ YL +H D+ NIL++ + K
Sbjct: 107 FLR----LNDGQFTVIQ-LVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCK 158
Query: 468 ISDFGLAKICEGRESIVSMT---GARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL++ E S + T G + I + APE F + + SD +SYG++++E+
Sbjct: 159 VSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEV 216
Query: 525 T--GEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY--------ARKM 574
GE+ P+W D+ Q + N +++Y +
Sbjct: 217 MSFGER---------------PYW---------DMSNQDVINAIEQDYRLPPPPDCPTSL 252
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ L C Q + + RP +VV L+
Sbjct: 253 HQLMLDCWQKDRNARPRFPQVVSALD 278
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
Q VAIK L + K G E+F +E +R H N+V LLG + ++I+ + S+G
Sbjct: 40 QAVAIKTLKD-KAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 98
Query: 405 LEKFIHEKHP----------LETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
L +F+ + P L+ + IA G+EYL + ++H D+
Sbjct: 99 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLA 155
Query: 455 PHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDV 514
N+L+ + KISD GL + + + + I ++APE +G+ S SD+
Sbjct: 156 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDI 213
Query: 515 YSYGMMVFEM--------TGEKNNANVAVDRSSEIY-----FPHWVY 548
+SYG++++E+ G N V + R+ ++ P WVY
Sbjct: 214 WSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVY 260
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 176
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 177 PGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 233
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 234 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 279
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 280 TQCWQHQPEDRPNFAIILERIE 301
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 54 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 113
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 114 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 167
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 168 PGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 224
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 225 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 270
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 271 TQCWQHQPEDRPNFAIILERIE 292
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 120 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 171
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 172 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 120 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 171
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 172 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 228
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 77 QVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 190
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 191 PGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 247
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 248 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 293
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 294 TQCWQHQPEDRPNFAIILERIE 315
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 62 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 121
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 175
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 176 PGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 232
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 233 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 278
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 279 TQCWQHQPEDRPNFAIILERIE 300
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 176
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 177 PGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 233
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 234 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 279
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 280 TQCWQHQPEDRPNFAIILERIE 301
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 77 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 136
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 190
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 191 PGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 247
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 248 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 293
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 294 TQCWQHQPEDRPNFAIILERIE 315
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 102 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 153
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 210
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 62 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 121
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 175
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 176 PGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 232
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 233 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 278
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 279 TQCWQHQPEDRPNFAIILERIE 300
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K + + E F+ E + H +V L + +I EF++ GSL F
Sbjct: 41 KVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF 99
Query: 409 IHE----KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ K PL L + IA G+ ++ + +H D++ NIL+
Sbjct: 100 LKSDEGSKQPLPK--------LIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASL 148
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLA++ E E + GA+ I + APE NFG + KSDV+S+G+++ E+
Sbjct: 149 VCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEI 205
Query: 525 T 525
Sbjct: 206 V 206
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 69 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 128
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 129 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 182
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 183 PGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 239
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 240 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 285
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 286 TQCWQHQPEDRPNFAIILERIE 307
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 79 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 138
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 139 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 192
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 193 PGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 249
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 250 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 295
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 296 TQCWQHQPEDRPNFAIILERIE 317
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 176
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 177 PGPGRVAKIGDFGMAQDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 233
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 234 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 279
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 280 TQCWQHQPEDRPNFAIILERIE 301
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K + + E F+ E + H +V L + +I EF++ GSL F
Sbjct: 214 KVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF 272
Query: 409 IHE----KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ K PL L + IA G+ ++ + +H D++ NIL+
Sbjct: 273 LKSDEGSKQPLPK--------LIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASL 321
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLA++ E E + GA+ I + APE NFG + KSDV+S+G+++ E+
Sbjct: 322 VCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEI 378
Query: 525 T 525
Sbjct: 379 V 379
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 33/262 (12%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 89 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 148
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 149 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 202
Query: 466 P------KISDFGLAKICEGRESIVSMTG-ARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
P KI DFG+A+ R S G A + ++ PE F G + K+D +S+G
Sbjct: 203 PGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFG 259
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ S Y P+ E+ E + G + K + +
Sbjct: 260 VLLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIM 305
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 306 TQCWQHQPEDRPNFAIILERIE 327
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 27/197 (13%)
Query: 349 NVAIKVLNETKGNGED--FINEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L E + E ++E+ +++ SH NIV LLG C LI+E+ G L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 406 --------EKFIHEKHPLETNQKLK---------WEVLYKIAVGIARGLEYLH-RGCNTR 447
EKF ++ E ++L+ +E L A +A+G+E+L + C
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC--- 193
Query: 448 ILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGE 507
+H D+ N+L+ KI DFGLA+ + V AR + ++APE G
Sbjct: 194 -VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE--GI 250
Query: 508 VSYKSDVYSYGMMVFEM 524
+ KSDV+SYG++++E+
Sbjct: 251 YTIKSDVWSYGILLWEI 267
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 368 EVASISRTSHVNIVTLLGFCFEGHR----RALIYEFVSNGSLEKFIHEKHPLETNQKLKW 423
EV S+ H NI+ +G G LI F GSL F L+ N + W
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDF------LKAN-VVSW 120
Query: 424 EVLYKIAVGIARGLEYLHR-------GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKI 476
L IA +ARGL YLH G I H DIK N+LL + I+DFGLA
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 477 CEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSY-KSDVYSYGMMVFEMTGEKNNANV 533
E +S G GT Y+APEV NF ++ + D+Y+ G++++E+ A+
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240
Query: 534 AVD 536
VD
Sbjct: 241 PVD 243
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 17/183 (9%)
Query: 348 QNVAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFE--GHRRALIYEFVSNG 403
+ VA+K L G D E+ + H NIV G C E G+ LI EF+ +G
Sbjct: 51 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 110
Query: 404 SLEKFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE 462
SL++++ + K+ + Q+LK+ AV I +G++YL + + +H D+ N+L++
Sbjct: 111 SLKEYLPKNKNKINLKQQLKY------AVQICKGMDYL---GSRQYVHRDLAARNVLVES 161
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGT-IGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
+ KI DFGL K E + ++ R + + + APE C + SDV+S+G+ +
Sbjct: 162 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE--CLMQSKFYIASDVWSFGVTL 219
Query: 522 FEM 524
E+
Sbjct: 220 HEL 222
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 31/261 (11%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 80 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 139
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 140 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 193
Query: 466 P------KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
P KI DFG+A+ A + ++ PE F G + K+D +S+G+
Sbjct: 194 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGV 251
Query: 520 MVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSL 579
+++E+ S Y P+ E+ E + G + K + +
Sbjct: 252 LLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIMT 297
Query: 580 WCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 298 QCWQHQPEDRPNFAIILERIE 318
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 17/183 (9%)
Query: 348 QNVAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFE--GHRRALIYEFVSNG 403
+ VA+K L G D E+ + H NIV G C E G+ LI EF+ +G
Sbjct: 39 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 98
Query: 404 SLEKFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE 462
SL++++ + K+ + Q+LK+ AV I +G++YL + + +H D+ N+L++
Sbjct: 99 SLKEYLPKNKNKINLKQQLKY------AVQICKGMDYL---GSRQYVHRDLAARNVLVES 149
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGT-IGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
+ KI DFGL K E + ++ R + + + APE C + SDV+S+G+ +
Sbjct: 150 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE--CLMQSKFYIASDVWSFGVTL 207
Query: 522 FEM 524
E+
Sbjct: 208 HEL 210
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 31/261 (11%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K L E ++ + DF+ E IS+ +H NIV +G + R ++ E ++ G L+
Sbjct: 103 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 162
Query: 407 KFIHEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
F+ E P + L L +A IA G +YL +H DI N LL C
Sbjct: 163 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---C 216
Query: 466 P------KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
P KI DFG+A+ A + ++ PE F G + K+D +S+G+
Sbjct: 217 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGV 274
Query: 520 MVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSL 579
+++E+ S Y P+ E+ E + G + K + +
Sbjct: 275 LLWEIF-------------SLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIMT 320
Query: 580 WCIQTNPSDRPSMNRVVEMLE 600
C Q P DRP+ ++E +E
Sbjct: 321 QCWQHQPEDRPNFAIILERIE 341
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 20/181 (11%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+VAIKVL + K + E+ + E + + + IV L+G C + L+ E G L
Sbjct: 365 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLH 423
Query: 407 KFI---HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
KF+ E+ P+ E+L+++++G ++YL +H ++ N+LL
Sbjct: 424 KFLVGKREEIPVSNVA----ELLHQVSMG----MKYLE---EKNFVHRNLAARNVLLVNR 472
Query: 464 FCPKISDFGLAKICEGRESIVSMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KISDFGL+K +S + A + + + APE C NF + S +SDV+SYG+ ++
Sbjct: 473 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--CINFRKFSSRSDVWSYGVTMW 530
Query: 523 E 523
E
Sbjct: 531 E 531
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 35/265 (13%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K +NE+ E +F+NE + + + ++V LLG +G ++ E +++G L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 408 FIHEKHPLETNQKLK----WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P N + + + ++A IA G+ YL+ + +H D+ N ++ D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + ++APE G + SD++S+G+++
Sbjct: 167 FTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVL 222
Query: 522 FEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL---QGIENEEDKEYARKMILVS 578
+E+T Y+ L E+ L G ++ D R L+
Sbjct: 223 WEITSLAEQP----------------YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMR 266
Query: 579 LWCIQTNPSDRPSMNRVVEMLEGSL 603
+ C Q NP+ RP+ +V +L+ L
Sbjct: 267 M-CWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 43/274 (15%)
Query: 349 NVAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L E E D ++E + + +H +++ L G C + LI E+ GSL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 407 KFIHEK--------------------HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNT 446
F+ E HP E + L L A I++G++YL
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDE--RALTMGDLISFAWQISQGMQYL---AEM 169
Query: 447 RILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFG 506
+++H D+ NIL+ E KISDFGL++ +S V + R + ++A E +
Sbjct: 170 KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI- 228
Query: 507 EVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEE 566
+ +SDV+S+G++++E+ N + P ++ L+ G E
Sbjct: 229 -YTTQSDVWSFGVLLWEIVTLGGNPYPGIP-------PERLFNLLK-------TGHRMER 273
Query: 567 DKEYARKMILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ +M + L C + P RP + + LE
Sbjct: 274 PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 29/262 (11%)
Query: 350 VAIKVLNETK--GNGEDFINEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L T E ++E+ +S H NIV LLG C G +I E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 407 KFIHEK-HPLET-------NQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNI 458
F+ K LET N L L + +A+G+ +L + +H D+ N+
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNV 195
Query: 459 LLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
LL KI DFGLA+ + + AR + ++APE V +SDV+SYG
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYG 253
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ N + +S+ Y +L +D G + + + + +
Sbjct: 254 ILLWEIFSLGLNPYPGILVNSKFY---------KLVKD----GYQMAQPAFAPKNIYSIM 300
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C P+ RP+ ++ L+
Sbjct: 301 QACWALEPTHRPTFQQICSFLQ 322
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 25/258 (9%)
Query: 350 VAIKVLNETK--GNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L T E ++E+ +S H NIV LLG C G +I E+ G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 407 KFIHEKHPL----ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE 462
F+ K E + L+ L + +A+G+ +L + +H D+ N+LL
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTN 187
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA+ + + AR + ++APE V +SDV+SYG++++
Sbjct: 188 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLW 245
Query: 523 EMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCI 582
E+ N + +S+ Y +L +D G + + + + + C
Sbjct: 246 EIFSLGLNPYPGILVNSKFY---------KLVKD----GYQMAQPAFAPKNIYSIMQACW 292
Query: 583 QTNPSDRPSMNRVVEMLE 600
P+ RP+ ++ L+
Sbjct: 293 ALEPTHRPTFQQICSFLQ 310
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 31/264 (11%)
Query: 350 VAIKVLNETK--GNGEDFINEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L T E ++E+ +S H NIV LLG C G +I E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 407 KFIHEKHP--LETN--------QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPH 456
F+ K P LE + ++L L + +A+G+ +L + +H D+
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAAR 195
Query: 457 NILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYS 516
N+LL KI DFGLA+ + + AR + ++APE V +SDV+S
Sbjct: 196 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWS 253
Query: 517 YGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMIL 576
YG++++E+ N + +S+ Y +L +D G + + + +
Sbjct: 254 YGILLWEIFSLGLNPYPGILVNSKFY---------KLVKD----GYQMAQPAFAPKNIYS 300
Query: 577 VSLWCIQTNPSDRPSMNRVVEMLE 600
+ C P+ RP+ ++ L+
Sbjct: 301 IMQACWALEPTHRPTFQQICSFLQ 324
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 43/274 (15%)
Query: 349 NVAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L E E D ++E + + +H +++ L G C + LI E+ GSL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 407 KFIHEK--------------------HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNT 446
F+ E HP E + L L A I++G++YL
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDE--RALTMGDLISFAWQISQGMQYL---AEM 169
Query: 447 RILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFG 506
+++H D+ NIL+ E KISDFGL++ +S V + R + ++A E +
Sbjct: 170 KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI- 228
Query: 507 EVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEE 566
+ +SDV+S+G++++E+ N + P ++ L+ G E
Sbjct: 229 -YTTQSDVWSFGVLLWEIVTLGGNPYPGIP-------PERLFNLLK-------TGHRMER 273
Query: 567 DKEYARKMILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ +M + L C + P RP + + LE
Sbjct: 274 PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K +NE+ E +F+NE + + + ++V LLG +G ++ E +++G L+
Sbjct: 47 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 106
Query: 408 FIHEKHPLETNQKLK----WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P N + + + ++A IA G+ YL+ + +H D+ N ++ D
Sbjct: 107 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 163
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + ++APE G + SD++S+G+++
Sbjct: 164 FTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVL 219
Query: 522 FEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL---QGIENEEDKEYARKMILVS 578
+E+T Y+ L E+ L G ++ D R L+
Sbjct: 220 WEITSLAEQP----------------YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMR 263
Query: 579 LWCIQTNPSDRPSMNRVVEMLEGSL 603
+ C Q NP RP+ +V +L+ L
Sbjct: 264 M-CWQFNPKMRPTFLEIVNLLKDDL 287
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K +NE+ E +F+NE + + + ++V LLG +G ++ E +++G L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 408 FIHEKHPLETNQKLK----WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P N + + + ++A IA G+ YL+ + +H D+ N ++ D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + ++APE G + SD++S+G+++
Sbjct: 167 FTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVL 222
Query: 522 FEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL---QGIENEEDKEYARKMILVS 578
+E+T Y+ L E+ L G ++ D R L+
Sbjct: 223 WEITSLAEQP----------------YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMR 266
Query: 579 LWCIQTNPSDRPSMNRVVEMLEGSL 603
+ C Q NP RP+ +V +L+ L
Sbjct: 267 M-CWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 43 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 102
Query: 408 FIHEKHP-LETNQKLKWEVLYK---IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P +E N L L K +A IA G+ YL+ + +H D+ N ++ ED
Sbjct: 103 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 159
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 160 FTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 215
Query: 522 FEMT 525
+E+
Sbjct: 216 WEIA 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ + H +++ L + I +G+EYL R +H D+ NIL++ +
Sbjct: 105 DYL-QAHA----ERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 156
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 213
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 25/258 (9%)
Query: 350 VAIKVLNETK--GNGEDFINEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L T E ++E+ +S H NIV LLG C G +I E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 407 KFIHEKHPL----ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE 462
F+ K E + L+ L + +A+G+ +L + +H D+ N+LL
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTN 195
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA+ + + AR + ++APE V +SDV+SYG++++
Sbjct: 196 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLW 253
Query: 523 EMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCI 582
E+ N + +S+ Y +L +D G + + + + + C
Sbjct: 254 EIFSLGLNPYPGILVNSKFY---------KLVKD----GYQMAQPAFAPKNIYSIMQACW 300
Query: 583 QTNPSDRPSMNRVVEMLE 600
P+ RP+ ++ L+
Sbjct: 301 ALEPTHRPTFQQICSFLQ 318
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 408 FIHEKHP-LETNQKLKWEVLYK---IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P +E N L L K +A IA G+ YL+ + +H D+ N ++ ED
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 168
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 169 FTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 224
Query: 522 FEMT 525
+E+
Sbjct: 225 WEIA 228
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVL-NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSLE 406
VA+K L + T+ + DF E+ + H NIV G C+ RR LI E++ GSL
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
++ +KH +++ L + I +G+EYL R +H ++ NIL++ +
Sbjct: 103 DYL-QKH----KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRV 154
Query: 467 KISDFGLAKIC-EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGL K+ + +E I + APE + + S SDV+S+G++++E+
Sbjct: 155 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYEL 211
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K +NE+ E +F+NE + + + ++V LLG +G ++ E +++G L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 408 FIHEKHPLETNQKLK----WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P N + + + ++A IA G+ YL+ + +H D+ N ++ D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + ++APE G + SD++S+G+++
Sbjct: 167 FTVKIGDFGMTR--DIYETAYYRKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVL 222
Query: 522 FEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL---QGIENEEDKEYARKMILVS 578
+E+T Y+ L E+ L G ++ D R L+
Sbjct: 223 WEITSLAEQP----------------YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMR 266
Query: 579 LWCIQTNPSDRPSMNRVVEMLEGSL 603
+ C Q NP RP+ +V +L+ L
Sbjct: 267 M-CWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 348 QNVAIKVLNETK--GNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VAIK +N K + ++ + E+ ++S+ H NIV+ L+ + +S GS+
Sbjct: 36 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 406 EKFIHEKHPLETNQK----LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
I KH + + L + I + GLEYLH+ +H D+K NILL
Sbjct: 96 LDII--KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLG 150
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIG---YIAPEVFCRNFGEVSYKSDVYSYG 518
ED +I+DFG++ I + +G ++APEV + G +K+D++S+G
Sbjct: 151 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFG 209
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEED-----LGLQGIENEEDKEYA-- 571
+ E+ A + +P L L+ D G+Q + E K+Y
Sbjct: 210 ITAIEL---------ATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ--DKEMLKKYGKS 258
Query: 572 -RKMILVSLWCIQTNPSDRPS 591
RKMI + C+Q +P RP+
Sbjct: 259 FRKMISL---CLQKDPEKRPT 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 348 QNVAIKVLNETK--GNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VAIK +N K + ++ + E+ ++S+ H NIV+ L+ + +S GS+
Sbjct: 41 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 406 EKFIHEKHPLETNQK----LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
I KH + + L + I + GLEYLH+ +H D+K NILL
Sbjct: 101 LDII--KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLG 155
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIG---YIAPEVFCRNFGEVSYKSDVYSYG 518
ED +I+DFG++ I + +G ++APEV + G +K+D++S+G
Sbjct: 156 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFG 214
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEED-----LGLQGIENEEDKEYA-- 571
+ E+ A + +P L L+ D G+Q + E K+Y
Sbjct: 215 ITAIEL---------ATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ--DKEMLKKYGKS 263
Query: 572 -RKMILVSLWCIQTNPSDRPS 591
RKMI + C+Q +P RP+
Sbjct: 264 FRKMISL---CLQKDPEKRPT 281
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 43/274 (15%)
Query: 349 NVAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L E E D ++E + + +H +++ L G C + LI E+ GSL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 407 KFIHEK--------------------HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNT 446
F+ E HP E + L L A I++G++YL
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDE--RALTMGDLISFAWQISQGMQYL---AEM 169
Query: 447 RILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFG 506
++H D+ NIL+ E KISDFGL++ +S V + R + ++A E +
Sbjct: 170 SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI- 228
Query: 507 EVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEE 566
+ +SDV+S+G++++E+ N + P ++ L+ G E
Sbjct: 229 -YTTQSDVWSFGVLLWEIVTLGGNPYPGIP-------PERLFNLLK-------TGHRMER 273
Query: 567 DKEYARKMILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ +M + L C + P RP + + LE
Sbjct: 274 PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 90/178 (50%), Gaps = 24/178 (13%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI 409
+A K L +G+ E NE+A + + H NIV L G LI + VS G L I
Sbjct: 51 IAKKALEGKEGSME---NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI 107
Query: 410 HEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL---LDEDF 464
EK + +L ++VL ++YLH + I+H D+KP N+L LDED
Sbjct: 108 VEKGFYTERDASRLIFQVL--------DAVKYLH---DLGIVHRDLKPENLLYYSLDEDS 156
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
ISDFGL+K+ E S++S A GT GY+APEV + S D +S G++ +
Sbjct: 157 KIMISDFGLSKM-EDPGSVLST--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAY 209
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K +NE+ E +F+NE + + + ++V LLG +G ++ E +++G L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 408 FIHEKHPLETNQKLK----WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P N + + + ++A IA G+ YL+ + +H D+ N ++ D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + ++APE G + SD++S+G+++
Sbjct: 167 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVL 222
Query: 522 FEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL---QGIENEEDKEYARKMILVS 578
+E+T Y+ L E+ L G ++ D R L+
Sbjct: 223 WEITSLAEQP----------------YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMR 266
Query: 579 LWCIQTNPSDRPSMNRVVEMLEGSL 603
+ C Q NP RP+ +V +L+ L
Sbjct: 267 M-CWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 49 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 108
Query: 408 FIHEKHP-LETNQKLKWEVLYK---IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P +E N L L K +A IA G+ YL+ + +H D+ N ++ ED
Sbjct: 109 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 165
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 166 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 221
Query: 522 FEMT 525
+E+
Sbjct: 222 WEIA 225
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 408 FIHEKHP-LETNQKLKWEVLYK---IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P +E N L L K +A IA G+ YL+ + +H D+ N ++ ED
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 167
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 168 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 223
Query: 522 FEMT 525
+E+
Sbjct: 224 WEIA 227
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 25/183 (13%)
Query: 348 QNVAIKVLNETKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+ VA+K ++ K + + NEV + H N+V + G ++ EF+ G+L
Sbjct: 71 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ T+ ++ E + + + + R L YLH N ++H DIK +ILL D
Sbjct: 131 DIV-------THTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRI 180
Query: 467 KISDFG----LAKICEGRESIVSMTGARGTIGYIAPEVFCR-NFGEVSYKSDVYSYGMMV 521
K+SDFG ++K R+ +V GT ++APEV R +G + D++S G+MV
Sbjct: 181 KLSDFGFCAQVSKEVPKRKXLV------GTPYWMAPEVISRLPYGT---EVDIWSLGIMV 231
Query: 522 FEM 524
EM
Sbjct: 232 IEM 234
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 408 FIHEKHP-LETNQKLKWEVLYK---IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P +E N L L K +A IA G+ YL+ + +H D+ N ++ ED
Sbjct: 118 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 175 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 230
Query: 522 FEMT 525
+E+
Sbjct: 231 WEIA 234
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 408 FIHEKHP-LETNQKLKWEVLYK---IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P +E N L L K +A IA G+ YL+ + +H D+ N ++ ED
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 167
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 168 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 223
Query: 522 FEMT 525
+E+
Sbjct: 224 WEIA 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 408 FIHEKHP-LETNQKLKWEVLYK---IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P +E N L L K +A IA G+ YL+ + +H D+ N ++ ED
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 161
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 162 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 217
Query: 522 FEMT 525
+E+
Sbjct: 218 WEIA 221
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 35/265 (13%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K +NE+ E +F+NE + + + ++V LLG +G ++ E +++G L+
Sbjct: 49 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 108
Query: 408 FIHEKHPLETNQKLK----WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P N + + + ++A IA G+ YL+ + +H D+ N ++ D
Sbjct: 109 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 165
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + ++APE G + SD++S+G+++
Sbjct: 166 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVL 221
Query: 522 FEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL---QGIENEEDKEYARKMILVS 578
+E+T Y+ L E+ L G ++ D R L+
Sbjct: 222 WEITSLAEQP----------------YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMR 265
Query: 579 LWCIQTNPSDRPSMNRVVEMLEGSL 603
+ C Q NP RP+ +V +L+ L
Sbjct: 266 M-CWQFNPKMRPTFLEIVNLLKDDL 289
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 408 FIHEKHP-LETNQKLKWEVLYK---IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P +E N L L K +A IA G+ YL+ + +H D+ N ++ ED
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 168
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 169 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 224
Query: 522 FEMT 525
+E+
Sbjct: 225 WEIA 228
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 23/179 (12%)
Query: 351 AIKVLNETK---GNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-E 406
AIK++ +T + + EVA + H NI+ L F + L+ E G L +
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL---DED 463
+ IH E + + I + G+ YLH+ I+H D+KP N+LL ++D
Sbjct: 126 EIIHRMKFNEVDAAV-------IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKD 175
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGL+ + E ++ M GT YIAPEV + + E K DV+S G+++F
Sbjct: 176 ALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLRKKYDE---KCDVWSIGVILF 228
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNG-EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L + N +DF E ++ H +IV G C EG +++E++ +G L KF
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 409 IHEKHP-----LETN--QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
+ P E N +L + IA IA G+ YL + +H D+ N L+
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVG 162
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMM 520
E+ KI DFG+++ + I ++ PE + R F + +SDV+S G++
Sbjct: 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF---TTESDVWSLGVV 219
Query: 521 VFEM 524
++E+
Sbjct: 220 LWEI 223
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 29/262 (11%)
Query: 350 VAIKVLNETK--GNGEDFINEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L T E ++E+ +S H NIV LLG C G +I E+ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 407 KFIHEK-HPLET-------NQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNI 458
F+ K LET N L + +A+G+ +L + +H D+ N+
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNV 195
Query: 459 LLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYG 518
LL KI DFGLA+ + + AR + ++APE V +SDV+SYG
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYG 253
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ N + +S+ Y +L +D G + + + + +
Sbjct: 254 ILLWEIFSLGLNPYPGILVNSKFY---------KLVKD----GYQMAQPAFAPKNIYSIM 300
Query: 579 LWCIQTNPSDRPSMNRVVEMLE 600
C P+ RP+ ++ L+
Sbjct: 301 QACWALEPTHRPTFQQICSFLQ 322
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 48 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLL 105
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 106 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 156
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 157 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 213
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 139
Query: 408 FIHEKHP-LETNQKLKWEVLYK---IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P +E N L L K +A IA G+ YL+ + +H D+ N ++ ED
Sbjct: 140 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 196
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 197 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 252
Query: 522 FEMT 525
+E+
Sbjct: 253 WEIA 256
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIKVL E K N E ++E ++ + LLG C + L+ + + G L
Sbjct: 49 VAIKVLRENTSPKANKE-ILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLL 106
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ E + L + L W + IA+G+ YL + R++H D+ N+L+
Sbjct: 107 DHVRENRGRLGSQDLLNW------CMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNH 157
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLA++ + E+ G + I ++A E R +++SDV+SYG+ V+E+
Sbjct: 158 VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR--RFTHQSDVWSYGVTVWEL 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 51 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 108
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 109 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 159
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 160 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 216
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 48 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 107
Query: 408 FIHEKHPLETNQKL----KWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P N + + ++A IA G+ YL+ + +H D+ N ++ ED
Sbjct: 108 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 164
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 165 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 220
Query: 522 FEMT 525
+E+
Sbjct: 221 WEIA 224
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 91/180 (50%), Gaps = 23/180 (12%)
Query: 350 VAIKVLNETKGNGED--FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + + G++ NE+A + + H NIV L G LI + VS G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 408 FIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL---LDE 462
I EK + +L ++VL ++YLH + I+H D+KP N+L LDE
Sbjct: 106 RIVEKGFYTERDASRLIFQVL--------DAVKYLH---DLGIVHRDLKPENLLYYSLDE 154
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
D ISDFGL+K+ E S++S A GT GY+APEV + S D +S G++ +
Sbjct: 155 DSKIMISDFGLSKM-EDPGSVLST--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAY 209
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 408 FIHEKHPLETNQKL----KWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P N + + ++A IA G+ YL+ + +H D+ N ++ ED
Sbjct: 118 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 175 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 230
Query: 522 FEMT 525
+E+
Sbjct: 231 WEIA 234
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 91/180 (50%), Gaps = 23/180 (12%)
Query: 350 VAIKVLNETKGNGED--FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + + G++ NE+A + + H NIV L G LI + VS G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 408 FIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL---LDE 462
I EK + +L ++VL ++YLH + I+H D+KP N+L LDE
Sbjct: 106 RIVEKGFYTERDASRLIFQVL--------DAVKYLH---DLGIVHRDLKPENLLYYSLDE 154
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
D ISDFGL+K+ E S++S A GT GY+APEV + S D +S G++ +
Sbjct: 155 DSKIMISDFGLSKM-EDPGSVLST--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAY 209
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 47 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLL 104
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 155
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 212
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 47 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 104
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 155
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 212
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 48 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 105
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 106 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 156
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 157 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 213
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 91/180 (50%), Gaps = 23/180 (12%)
Query: 350 VAIKVLNETKGNGED--FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + + G++ NE+A + + H NIV L G LI + VS G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 408 FIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL---LDE 462
I EK + +L ++VL ++YLH + I+H D+KP N+L LDE
Sbjct: 106 RIVEKGFYTERDASRLIFQVL--------DAVKYLH---DLGIVHRDLKPENLLYYSLDE 154
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
D ISDFGL+K+ E S++S A GT GY+APEV + S D +S G++ +
Sbjct: 155 DSKIMISDFGLSKM-EDPGSVLST--ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAY 209
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 50 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 107
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 108 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 158
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 215
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 54 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 111
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 112 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 162
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 219
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 49 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 106
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 107 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 157
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 214
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 348 QNVAIKVLNETK--GNGEDFINEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
VA+K+L + E ++E+ +S +H+NIV LLG C G +I E+ G
Sbjct: 54 MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 113
Query: 405 LEKFIHEKHPLETNQKLKWEVLY------------KIAVGIARGLEYLHRGCNTRILHFD 452
L F+ K K ++ + +A+G+ +L + +H D
Sbjct: 114 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRD 170
Query: 453 IKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEV-SYK 511
+ NILL KI DFGLA+ + + V AR + ++APE F V +++
Sbjct: 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFE 227
Query: 512 SDVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKE 569
SDV+SYG+ ++E+ G + VD YK ++ +G +
Sbjct: 228 SDVWSYGIFLWELFSLGSSPYPGMPVDSK--------FYKMIK-------EGFRMLSPEH 272
Query: 570 YARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
+M + C +P RP+ ++V+++E +
Sbjct: 273 APAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 47 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 104
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 155
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 212
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 53 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 110
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 111 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 161
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 162 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 218
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 47 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 104
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 155
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 212
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 72 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 129
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 130 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 180
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 181 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 237
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 57 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 114
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 115 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 165
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 166 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 222
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLEK 407
VA+K + + + F+ E + +++ H N+V LLG E ++ E+++ GSL
Sbjct: 46 KVAVKCI-KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 104
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
++ + L + L K ++ + +EYL +H D+ N+L+ ED K
Sbjct: 105 YLRSR----GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 157
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL K E+ + + + + APE + S KSDV+S+G++++E+
Sbjct: 158 VSDFGLTK-----EASSTQDTGKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEI 207
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 49 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 106
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 107 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 157
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 54 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 111
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 112 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 162
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 219
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLEK 407
VA+K + + + F+ E + +++ H N+V LLG E ++ E+++ GSL
Sbjct: 31 KVAVKCI-KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 89
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
++ + L + L K ++ + +EYL +H D+ N+L+ ED K
Sbjct: 90 YLRSR----GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 142
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL K E+ + + + + APE + S KSDV+S+G++++E+
Sbjct: 143 VSDFGLTK-----EASSTQDTGKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEI 192
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLEK 407
VA+K + + + F+ E + +++ H N+V LLG E ++ E+++ GSL
Sbjct: 218 KVAVKCI-KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 276
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
++ + L + L K ++ + +EYL +H D+ N+L+ ED K
Sbjct: 277 YLRSR----GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 329
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL K E+ + + + + APE + S KSDV+S+G++++E+
Sbjct: 330 VSDFGLTK-----EASSTQDTGKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEI 379
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 50 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 107
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 108 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 158
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 215
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 41 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 98
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 99 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 149
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 150 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 206
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 50 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 107
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 108 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 158
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 215
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 54 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 111
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 112 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 162
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 219
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 50 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 107
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 108 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 158
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 215
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 35/265 (13%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K +NE+ E +F+NE + + + ++V LLG +G ++ E +++G L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 408 FIHEKHPLETNQKLK----WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P N + + + ++A IA G+ YL+ + +H ++ N ++ D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHD 166
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + ++APE G + SD++S+G+++
Sbjct: 167 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVL 222
Query: 522 FEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL---QGIENEEDKEYARKMILVS 578
+E+T Y+ L E+ L G ++ D R L+
Sbjct: 223 WEITSLAEQP----------------YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMR 266
Query: 579 LWCIQTNPSDRPSMNRVVEMLEGSL 603
+ C Q NP+ RP+ +V +L+ L
Sbjct: 267 M-CWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 47 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 104
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 155
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 212
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 35/265 (13%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K +NE+ E +F+NE + + + ++V LLG +G ++ E +++G L+
Sbjct: 51 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 110
Query: 408 FIHEKHPLETNQKLK----WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P N + + + ++A IA G+ YL+ + +H ++ N ++ D
Sbjct: 111 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHD 167
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + ++APE G + SD++S+G+++
Sbjct: 168 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVL 223
Query: 522 FEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL---QGIENEEDKEYARKMILVS 578
+E+T Y+ L E+ L G ++ D R L+
Sbjct: 224 WEITSLAEQP----------------YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMR 267
Query: 579 LWCIQTNPSDRPSMNRVVEMLEGSL 603
+ C Q NP+ RP+ +V +L+ L
Sbjct: 268 M-CWQFNPNMRPTFLEIVNLLKDDL 291
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 15/184 (8%)
Query: 350 VAIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK +NE E +F+NE + + + ++V LLG +G +I E ++ G L+
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 408 FIHEKHP-LETNQKLKWEVLYK---IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
++ P +E N L L K +A IA G+ YL+ + +H D+ N + ED
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAED 161
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARG--TIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
F KI DFG+ + + E+ G +G + +++PE G + SDV+S+G+++
Sbjct: 162 FTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 217
Query: 522 FEMT 525
+E+
Sbjct: 218 WEIA 221
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 39/273 (14%)
Query: 349 NVAIKVLNETK--GNGEDFINEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + E ++E+ +S +H+NIV LLG C G +I E+ G L
Sbjct: 71 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 130
Query: 406 EKFIHEKHPLETNQKLKWEVLY------------KIAVGIARGLEYLHRGCNTRILHFDI 453
F+ K K ++ + +A+G+ +L + +H D+
Sbjct: 131 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDL 187
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEV-SYKS 512
NILL KI DFGLA+ + + V AR + ++APE F V +++S
Sbjct: 188 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFES 244
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+SYG+ ++E+ G + VD YK ++ +G +
Sbjct: 245 DVWSYGIFLWELFSLGSSPYPGMPVDSK--------FYKMIK-------EGFRMLSPEHA 289
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
+M + C +P RP+ ++V+++E +
Sbjct: 290 PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 322
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 39/273 (14%)
Query: 349 NVAIKVLNETK--GNGEDFINEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + E ++E+ +S +H+NIV LLG C G +I E+ G L
Sbjct: 78 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 406 EKFIHEKHPLETNQKLKWEVLY------------KIAVGIARGLEYLHRGCNTRILHFDI 453
F+ K K ++ + +A+G+ +L + +H D+
Sbjct: 138 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDL 194
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEV-SYKS 512
NILL KI DFGLA+ + + V AR + ++APE F V +++S
Sbjct: 195 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFES 251
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+SYG+ ++E+ G + VD YK ++ +G +
Sbjct: 252 DVWSYGIFLWELFSLGSSPYPGMPVDSK--------FYKMIK-------EGFRMLSPEHA 296
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
+M + C +P RP+ ++V+++E +
Sbjct: 297 PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
++ + E + + + IV ++G C E L+ E G L K+ L+ N+ +K
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY------LQQNRHVK 109
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + ++ ++ G++YL + +H D+ N+LL KISDFGL+K E+
Sbjct: 110 DKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
Query: 483 IV-SMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
+ T + + + APE C N+ + S KSDV+S+G++++E
Sbjct: 167 XYKAQTHGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 206
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
++ + E + + + IV ++G C E L+ E G L K+ L+ N+ +K
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY------LQQNRHVK 125
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + ++ ++ G++YL + +H D+ N+LL KISDFGL+K E+
Sbjct: 126 DKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 483 IV-SMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
+ T + + + APE C N+ + S KSDV+S+G++++E
Sbjct: 183 YYKAQTHGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
++ + E + + + IV ++G C E L+ E G L K+ L+ N+ +K
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY------LQQNRHVK 125
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + ++ ++ G++YL + +H D+ N+LL KISDFGL+K E+
Sbjct: 126 DKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 483 IV-SMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
+ T + + + APE C N+ + S KSDV+S+G++++E
Sbjct: 183 YYKAQTHGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
++ + E + + + IV ++G C E L+ E G L K+ L+ N+ +K
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY------LQQNRHVK 123
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + ++ ++ G++YL + +H D+ N+LL KISDFGL+K E+
Sbjct: 124 DKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 180
Query: 483 IV-SMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
+ T + + + APE C N+ + S KSDV+S+G++++E
Sbjct: 181 YYKAQTHGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 39/273 (14%)
Query: 349 NVAIKVLNETK--GNGEDFINEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + E ++E+ +S +H+NIV LLG C G +I E+ G L
Sbjct: 78 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 406 EKFIHEKHPLETNQKLKWEVLY------------KIAVGIARGLEYLHRGCNTRILHFDI 453
F+ K K ++ + +A+G+ +L + +H D+
Sbjct: 138 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDL 194
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEV-SYKS 512
NILL KI DFGLA+ + + V AR + ++APE F V +++S
Sbjct: 195 AARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFES 251
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+SYG+ ++E+ G + VD YK ++ +G +
Sbjct: 252 DVWSYGIFLWELFSLGSSPYPGMPVDSK--------FYKMIK-------EGFRMLSPEHA 296
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
+M + C +P RP+ ++V+++E +
Sbjct: 297 PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 348 QNVAIKVLNETKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
+ VA+K+++ K + + NEV + H N+V + G ++ EF+ G+L
Sbjct: 71 RQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ + +L E + + + + L YLH ++H DIK +ILL D
Sbjct: 131 DIV-------SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRV 180
Query: 467 KISDFG----LAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
K+SDFG ++K R+ +V GT ++APEV R+ + + D++S G+MV
Sbjct: 181 KLSDFGFCAQISKDVPKRKXLV------GTPYWMAPEVISRSL--YATEVDIWSLGIMVI 232
Query: 523 EMT 525
EM
Sbjct: 233 EMV 235
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 16/177 (9%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLEK 407
VA+K + + + F+ E + +++ H N+V LLG E ++ E+++ GSL
Sbjct: 37 KVAVKCI-KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 95
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
++ + L + L K ++ + +EYL +H D+ N+L+ ED K
Sbjct: 96 YLRSR----GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 148
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+SDFGL K E+ + + + + APE S KSDV+S+G++++E+
Sbjct: 149 VSDFGLTK-----EASSTQDTGKLPVKWTAPEALRE--AAFSTKSDVWSFGILLWEI 198
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 39/273 (14%)
Query: 349 NVAIKVLNETK--GNGEDFINEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+K+L + E ++E+ +S +H+NIV LLG C G +I E+ G L
Sbjct: 73 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 132
Query: 406 EKFIHEKHPLETNQKLKWEVLY------------KIAVGIARGLEYLHRGCNTRILHFDI 453
F+ K K ++ + +A+G+ +L + +H D+
Sbjct: 133 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDL 189
Query: 454 KPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEV-SYKS 512
NILL KI DFGLA+ + + V AR + ++APE F V +++S
Sbjct: 190 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFES 246
Query: 513 DVYSYGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY 570
DV+SYG+ ++E+ G + VD YK ++ +G +
Sbjct: 247 DVWSYGIFLWELFSLGSSPYPGMPVDSK--------FYKMIK-------EGFRMLSPEHA 291
Query: 571 ARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSL 603
+M + C +P RP+ ++V+++E +
Sbjct: 292 PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 324
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
++ + E + + + IV ++G C E L+ E G L K+ L+ N+ +K
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY------LQQNRHVK 103
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + ++ ++ G++YL + +H D+ N+LL KISDFGL+K E+
Sbjct: 104 DKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 160
Query: 483 IV-SMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
+ T + + + APE C N+ + S KSDV+S+G++++E
Sbjct: 161 YYKAQTHGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 200
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
++ + E + + + IV ++G C E L+ E G L K+ L+ N+ +K
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY------LQQNRHVK 109
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + ++ ++ G++YL + +H D+ N+LL KISDFGL+K E+
Sbjct: 110 DKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
Query: 483 IV-SMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
+ T + + + APE C N+ + S KSDV+S+G++++E
Sbjct: 167 YYKAQTHGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 206
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT- 117
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
E L +I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 118 -EFLKQILNGVY----YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPAFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
++ + E + + + IV ++G C E L+ E G L K+ L+ N+ +K
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY------LQQNRHVK 105
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + ++ ++ G++YL + +H D+ N+LL KISDFGL+K E+
Sbjct: 106 DKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 162
Query: 483 IV-SMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
+ T + + + APE C N+ + S KSDV+S+G++++E
Sbjct: 163 YYKAQTHGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 202
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
++ + E + + + IV ++G C E L+ E G L K+ L+ N+ +K
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY------LQQNRHVK 115
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + ++ ++ G++YL + +H D+ N+LL KISDFGL+K E+
Sbjct: 116 DKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172
Query: 483 IV-SMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
+ T + + + APE C N+ + S KSDV+S+G++++E
Sbjct: 173 YYKAQTHGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 212
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
++ + E + + + IV ++G C E L+ E G L K+ L+ N+ +K
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY------LQQNRHVK 467
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + ++ ++ G++YL + +H D+ N+LL KISDFGL+K E+
Sbjct: 468 DKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524
Query: 483 IV-SMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
+ T + + + APE C N+ + S KSDV+S+G++++E
Sbjct: 525 YYKAQTHGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 564
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPL---ETNQ 419
E+ EV + H NI+TL LI E VS G L F+ EK L E Q
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 420 KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA- 474
LK I G+ YLH + RI HFD+KP NI+L + P K+ DFG+A
Sbjct: 120 FLKQ---------ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 167
Query: 475 KICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 168 KIEAGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 209
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
++ + E + + + IV ++G C E L+ E G L K+ L+ N+ +K
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY------LQQNRHVK 468
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + ++ ++ G++YL + +H D+ N+LL KISDFGL+K E+
Sbjct: 469 DKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 525
Query: 483 IV-SMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
+ T + + + APE C N+ + S KSDV+S+G++++E
Sbjct: 526 YYKAQTHGKWPVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 565
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPL---ETNQ 419
E+ EV + H NI+TL LI E VS G L F+ EK L E Q
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 112
Query: 420 KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA- 474
LK I G+ YLH + RI HFD+KP NI+L + P K+ DFG+A
Sbjct: 113 FLKQ---------ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160
Query: 475 KICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 161 KIEAGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 202
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 44 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 101
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA G+ YL + R++H D+ N+L+
Sbjct: 102 DYVREHKDNIGSQYLLNW------CVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQH 152
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 153 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 209
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPL---ETNQ 419
E+ EV + H NI+TL LI E VS G L F+ EK L E Q
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 133
Query: 420 KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA- 474
LK I G+ YLH + RI HFD+KP NI+L + P K+ DFG+A
Sbjct: 134 FLKQ---------ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 181
Query: 475 KICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 182 KIEAGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 223
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 349 NVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K + + E F+ E + H +V L + +I EF++ GSL F
Sbjct: 208 KVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF 266
Query: 409 IHE----KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ K PL L + IA G+ ++ + +H D++ NIL+
Sbjct: 267 LKSDEGSKQPLPK--------LIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASL 315
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLA++ GA+ I + APE NFG + KSDV+S+G+++ E+
Sbjct: 316 VCKIADFGLARV-----------GAKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEI 362
Query: 525 T 525
Sbjct: 363 V 363
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
V IKV+ + G + + + +I H +IV LLG C G L+ +++ GSL
Sbjct: 63 VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLD 121
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ + L ++L V IA+G+ YL ++H ++ N+LL +
Sbjct: 122 HVRQH-----RGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQ 173
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
++DFG+A + + + + A+ I ++A E +FG+ +++SDV+SYG+ V+E+
Sbjct: 174 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESI--HFGKYTHQSDVWSYGVTVWEL 228
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 348 QNVAIKVLN-ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
Q VAI+ +N + + E INE+ + + NIV L G ++ E+++ GSL
Sbjct: 46 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ E E + + + LE+LH + +++H DIK NILL D
Sbjct: 106 DVVTETCMDEGQ-------IAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSV 155
Query: 467 KISDFGL-AKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYKSDVYSYGMMVFEM 524
K++DFG A+I + +M GT ++APEV R +G K D++S G+M EM
Sbjct: 156 KLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEM 209
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 44/264 (16%)
Query: 351 AIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALI-------------- 396
AIK + T+ ++EV ++ +H +V E RR +
Sbjct: 35 AIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE--RRNFVKPMTAVKKKSTLFI 92
Query: 397 -YEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKP 455
E+ NG+L IH ++ L + W + +I L Y+H + I+H D+KP
Sbjct: 93 QMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQIL----EALSYIH---SQGIIHRDLKP 144
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIV------------SMTGARGTIGYIAPEVFCR 503
NI +DE KI DFGLAK I+ ++T A GT Y+A EV
Sbjct: 145 MNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD- 203
Query: 504 NFGEVSYKSDVYSYGMMVFEM-----TGEKNNANVAVDRSSEIYF-PHWVYKRLELEEDL 557
G + K D+YS G++ FEM TG + + RS I F P + ++++E+ +
Sbjct: 204 GTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKI 263
Query: 558 GLQGIENEEDKEYARKMILVSLWC 581
I+++ +K + +L S W
Sbjct: 264 IRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT- 117
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
E L +I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 118 -EFLKQILNGVY----YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
V IKV+ + G + + + +I H +IV LLG C G L+ +++ GSL
Sbjct: 45 VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLD 103
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ + L ++L V IA+G+ YL ++H ++ N+LL +
Sbjct: 104 HVRQH-----RGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQ 155
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
++DFG+A + + + + A+ I ++A E +FG+ +++SDV+SYG+ V+E+
Sbjct: 156 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESI--HFGKYTHQSDVWSYGVTVWEL 210
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT- 117
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
E L +I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 118 -EFLKQILNGVY----YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 51 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 108
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 109 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 159
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG AK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 160 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 119 F------LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 119 F------LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 49 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 106
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 107 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 157
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG AK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 113/271 (41%), Gaps = 38/271 (14%)
Query: 350 VAIKVLNETK--GNGEDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VA+K+L T E ++E+ +S H NIV LLG C G +I E+ G L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 407 KFIHEKHPL-----------------ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRIL 449
F+ K E + L+ L + +A+G+ +L + +
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCI 180
Query: 450 HFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVS 509
H D+ N+LL KI DFGLA+ + + AR + ++APE V
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV- 239
Query: 510 YKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKE 569
+SDV+SYG++++E+ N + +S+ Y +L +D G + +
Sbjct: 240 -QSDVWSYGILLWEIFSLGLNPYPGILVNSKFY---------KLVKD----GYQMAQPAF 285
Query: 570 YARKMILVSLWCIQTNPSDRPSMNRVVEMLE 600
+ + + C P+ RP+ ++ L+
Sbjct: 286 APKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 348 QNVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
+ V I L + K D I E+ + + +H N++ E + ++ E G L +
Sbjct: 63 KKVQIFDLMDAKARA-DCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSR 121
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
I KH + + + ++K V + LE++H + R++H DIKP N+ + K
Sbjct: 122 MI--KHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVK 176
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
+ D GL + + + + GT Y++PE N ++KSD++S G +++EM
Sbjct: 177 LGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAA 231
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 119 F------LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 119 F------LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 348 QNVAIKVLN-ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
Q VAI+ +N + + E INE+ + + NIV L G ++ E+++ GSL
Sbjct: 46 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ E ++ Q + + + LE+LH + +++H DIK NILL D
Sbjct: 106 DVVTETC-MDEGQ------IAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSV 155
Query: 467 KISDFGL-AKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYKSDVYSYGMMVFEM 524
K++DFG A+I + M GT ++APEV R +G K D++S G+M EM
Sbjct: 156 KLTDFGFCAQITPEQSKRSEMV---GTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEM 209
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L + +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 118 F------LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 169 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 207
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L + +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 118 F------LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 169 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 207
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 34/272 (12%)
Query: 350 VAIKVLNETKGNG-EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E + +DF E ++ H +IV G C EG +++E++ +G L +F
Sbjct: 45 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 104
Query: 409 IHEKHP----LETNQ-----KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ P L + L L +A +A G+ YL +H D+ N L
Sbjct: 105 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCL 161
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVYSYG 518
+ + KI DFG+++ + I ++ PE + R F + +SDV+S+G
Sbjct: 162 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF---TTESDVWSFG 218
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ + + I D QG E E + ++ +
Sbjct: 219 VVLWEIFTYGKQPWYQLSNTEAI--------------DCITQGRELERPRACPPEVYAIM 264
Query: 579 LWCIQTNPSDRPSMNRVVEMLEGSLDSLQIPP 610
C Q P R S+ V L+ Q PP
Sbjct: 265 RGCWQREPQQRHSIKDVHARLQA---LAQAPP 293
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 119 F------LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 49 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLL 106
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 107 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 157
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG AK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAI L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 81 VAIMELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 138
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 139 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 189
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 190 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 246
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 34/272 (12%)
Query: 350 VAIKVLNETKGNG-EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E + +DF E ++ H +IV G C EG +++E++ +G L +F
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 409 IHEKHP----LETNQ-----KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ P L + L L +A +A G+ YL +H D+ N L
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCL 190
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVYSYG 518
+ + KI DFG+++ + I ++ PE + R F + +SDV+S+G
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF---TTESDVWSFG 247
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ + + I D QG E E + ++ +
Sbjct: 248 VVLWEIFTYGKQPWYQLSNTEAI--------------DCITQGRELERPRACPPEVYAIM 293
Query: 579 LWCIQTNPSDRPSMNRVVEMLEGSLDSLQIPP 610
C Q P R S+ V L+ Q PP
Sbjct: 294 RGCWQREPQQRHSIKDVHARLQA---LAQAPP 322
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 34/272 (12%)
Query: 350 VAIKVLNETKGNG-EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L E + +DF E ++ H +IV G C EG +++E++ +G L +F
Sbjct: 51 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 110
Query: 409 IHEKHP----LETNQ-----KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ P L + L L +A +A G+ YL +H D+ N L
Sbjct: 111 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCL 167
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVYSYG 518
+ + KI DFG+++ + I ++ PE + R F + +SDV+S+G
Sbjct: 168 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF---TTESDVWSFG 224
Query: 519 MMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
++++E+ + + I D QG E E + ++ +
Sbjct: 225 VVLWEIFTYGKQPWYQLSNTEAI--------------DCITQGRELERPRACPPEVYAIM 270
Query: 579 LWCIQTNPSDRPSMNRVVEMLEGSLDSLQIPP 610
C Q P R S+ V L+ Q PP
Sbjct: 271 RGCWQREPQQRHSIKDVHARLQA---LAQAPP 299
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 119 F------LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT- 117
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
E L +I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 118 -EFLKQILNGVY----YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 119 F------LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 348 QNVAIKVLN-ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
Q VAI+ +N + + E INE+ + + NIV L G ++ E+++ GSL
Sbjct: 46 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ E ++ Q + + + LE+LH + +++H DIK NILL D
Sbjct: 106 DVVTETC-MDEGQ------IAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSV 155
Query: 467 KISDFGL-AKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYKSDVYSYGMMVFEM 524
K++DFG A+I + M GT ++APEV R +G K D++S G+M EM
Sbjct: 156 KLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEM 209
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 47 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 104
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 155
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG AK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 156 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 212
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 49 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 106
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 107 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 157
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG AK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 214
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 365 FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
F+ EV + H N++ +G ++ R I E++ G+L I + + W
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS-----MDSQYPWS 108
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC------- 477
A IA G+ YLH + I+H D+ HN L+ E+ ++DFGLA++
Sbjct: 109 QRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 478 EGRESIVSMTGAR-----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGEKN 529
EG S+ + G ++APE+ R++ E K DV+S+G+++ E+ G N
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDE---KVDVFSFGIVLCEIIGRVN 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 18/187 (9%)
Query: 350 VAIKVLNE-TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K L + T +DF E ++ H +IV G C +G +++E++ +G L KF
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107
Query: 409 IH----------EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNI 458
+ + P + +L + IA IA G+ YL + +H D+ N
Sbjct: 108 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNC 164
Query: 459 LLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVYSY 517
L+ + KI DFG+++ + I ++ PE + R F + +SDV+S+
Sbjct: 165 LVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF---TTESDVWSF 221
Query: 518 GMMVFEM 524
G++++E+
Sbjct: 222 GVILWEI 228
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 348 QNVAIKVLN-ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
Q VAI+ +N + + E INE+ + + NIV L G ++ E+++ GSL
Sbjct: 47 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ E ++ Q + + + LE+LH + +++H DIK NILL D
Sbjct: 107 DVVTETC-MDEGQ------IAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSV 156
Query: 467 KISDFGL-AKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYKSDVYSYGMMVFEM 524
K++DFG A+I + M GT ++APEV R +G K D++S G+M EM
Sbjct: 157 KLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEM 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCF--EGHRRALIYEFVSNGSLEKFIHEKHPLETNQK 420
E F+ E + +H N++ L+G EG L+ ++ +G L +FI + N
Sbjct: 67 EAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSP---QRNPT 122
Query: 421 LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGR 480
+K L + +ARG+EYL + +H D+ N +LDE F K++DFGLA+ R
Sbjct: 123 VK--DLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177
Query: 481 E--SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
E S+ AR + + A E + KSDV+S+G++++E+
Sbjct: 178 EYYSVQQHRHARLPVKWTALESL--QTYRFTTKSDVWSFGVLLWEL 221
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 350 VAIKVLNET---KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
VAIK L E K N E ++E ++ + ++ LLG C + LI + + G L
Sbjct: 54 VAIKELREATSPKANKE-ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL 111
Query: 407 KFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ E K + + L W V IA+G+ YL + R++H D+ N+L+
Sbjct: 112 DYVREHKDNIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQH 162
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG AK+ E G + I ++A E +++SDV+SYG+ V+E+
Sbjct: 163 VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWEL 219
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 348 QNVAIKVLNETKG--NGEDFINEVASISRTSHVNIVTLLGFCFEGHRRAL--IYEFVSNG 403
+ VA+K L G + + E+ + H +I+ G C + +L + E+V G
Sbjct: 61 EMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG 120
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
SL ++ +H + Q L A I G+ YLH +H D+ N+LLD D
Sbjct: 121 SLRDYL-PRHSIGLAQ------LLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDND 170
Query: 464 FCPKISDFGLAK-ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLAK + EG E + + APE C + Y SDV+S+G+ ++
Sbjct: 171 RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE--CLKEYKFYYASDVWSFGVTLY 228
Query: 523 EM 524
E+
Sbjct: 229 EL 230
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 103/257 (40%), Gaps = 54/257 (21%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VAIK ++ ++ +D I EV + + H N + G H L+ E+ +
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSAS 141
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ K PL+ + + + G +GL YLH + ++H D+K NILL E
Sbjct: 142 DLLEVHKKPLQEVE------IAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGL 192
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEV-FCRNFGEVSYKSDVYSYGMMVFEM 524
K+ DFG A I V GT ++APEV + G+ K DV+S G+ E+
Sbjct: 193 VKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
Query: 525 TGEKN-----NA-----NVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
K NA ++A + S + HW EY R
Sbjct: 247 AERKPPLFNMNAMSALYHIAQNESPALQSGHW---------------------SEYFRNF 285
Query: 575 ILVSLWCIQTNPSDRPS 591
+ C+Q P DRP+
Sbjct: 286 VDS---CLQKIPQDRPT 299
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 357 ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRAL--IYEFVSNGSLEKFIHEKHP 414
+ +G E E+A + + H N+V L+ + + L ++E V+ G + + K
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL 134
Query: 415 LETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA 474
E + ++ L K G+EYLH +I+H DIKP N+L+ ED KI+DFG++
Sbjct: 135 SEDQARFYFQDLIK-------GIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Query: 475 KICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS-DVYSYGMMVF 522
+G ++++S T GT ++APE S K+ DV++ G+ ++
Sbjct: 185 NEFKGSDALLSNT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 359 KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETN 418
K +DF NE+ I+ + +T G +IYE++ N S+ KF L+ N
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 419 QK--LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKI 476
+ +V+ I + Y+H N I H D+KP NIL+D++ K+SDFG ++
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 477 CEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
++ + G+RGT ++ PE F K D++S G+ ++ M
Sbjct: 202 MVDKK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 103/257 (40%), Gaps = 54/257 (21%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VAIK ++ ++ +D I EV + + H N + G H L+ E+ +
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSAS 102
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ K PL+ + + + G +GL YLH + ++H D+K NILL E
Sbjct: 103 DLLEVHKKPLQEVE------IAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGL 153
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEV-FCRNFGEVSYKSDVYSYGMMVFEM 524
K+ DFG A I V GT ++APEV + G+ K DV+S G+ E+
Sbjct: 154 VKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
Query: 525 TGEKN-----NA-----NVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
K NA ++A + S + HW EY R
Sbjct: 208 AERKPPLFNMNAMSALYHIAQNESPALQSGHW---------------------SEYFRNF 246
Query: 575 ILVSLWCIQTNPSDRPS 591
+ C+Q P DRP+
Sbjct: 247 VDS---CLQKIPQDRPT 260
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
ED EV+ + H N++TL LI E V+ G L F+ EK L +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEAT- 117
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
E L +I G+ YLH + +I HFD+KP NI+L + P KI DFGLA KI
Sbjct: 118 -EFLKQILNGVY----YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
G E GT ++APE+ N+ + ++D++S G++ +
Sbjct: 170 FGNE----FKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 24/184 (13%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
A KV+ ETK E D+I E+ ++ H IV LLG + + ++ EF G+++
Sbjct: 48 AAKVI-ETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 106
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ LE ++ L + + + L +LH + RI+H D+K N+L+ + ++
Sbjct: 107 M-----LELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRL 158
Query: 469 SDFGLA----KICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEV--SYKSDVYSYGMMV 521
+DFG++ K + R+S + GT ++APE V C + YK+D++S G+ +
Sbjct: 159 ADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL 212
Query: 522 FEMT 525
EM
Sbjct: 213 IEMA 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 24/184 (13%)
Query: 351 AIKVLNETKGNGE--DFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
A KV+ ETK E D+I E+ ++ H IV LLG + + ++ EF G+++
Sbjct: 40 AAKVI-ETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 98
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ LE ++ L + + + L +LH + RI+H D+K N+L+ + ++
Sbjct: 99 M-----LELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRL 150
Query: 469 SDFGLA----KICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEV--SYKSDVYSYGMMV 521
+DFG++ K + R+S + GT ++APE V C + YK+D++S G+ +
Sbjct: 151 ADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL 204
Query: 522 FEMT 525
EM
Sbjct: 205 IEMA 208
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 82/169 (48%), Gaps = 21/169 (12%)
Query: 359 KGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEK--HPLE 416
KG NE+A + + H NIV L + L+ + VS G L I EK + +
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK 120
Query: 417 TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL---DEDFCPKISDFGL 473
L +VL + YLHR I+H D+KP N+L DE+ ISDFGL
Sbjct: 121 DASTLIRQVL--------DAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGL 169
Query: 474 AKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
+K+ EG+ + M+ A GT GY+APEV + S D +S G++ +
Sbjct: 170 SKM-EGKGDV--MSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAY 213
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
E+ EV+ + + H NI+TL LI E VS G L F+ +K L +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH +I HFD+KP NI+L + P K+ DFGLA +I
Sbjct: 120 F------IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
+G V GT ++APE+ N+ + ++D++S G++ +
Sbjct: 171 DG----VEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 209
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 348 QNVAIKVLNETKGNGEDFINEVASISRTSH-VNIVTLLGFCFEGH------RRALIYEFV 400
Q AIKV++ T E+ E+ + + SH NI T G + + + L+ EF
Sbjct: 50 QLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFC 109
Query: 401 SNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL 460
GS+ I LK E + I I RGL +LH+ +++H DIK N+LL
Sbjct: 110 GAGSVTDLIKNT----KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLL 162
Query: 461 DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSY--KSDVYSY 517
E+ K+ DFG++ + ++ GT ++APEV C + +Y KSD++S
Sbjct: 163 TENAEVKLVDFGVSAQLD--RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSL 220
Query: 518 GMMVFEMT 525
G+ EM
Sbjct: 221 GITAIEMA 228
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 348 QNVAIKVLN-ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
Q VAI+ +N + + E INE+ + + NIV L G ++ E+++ GSL
Sbjct: 47 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ E ++ Q + + + LE+LH + +++H +IK NILL D
Sbjct: 107 DVVTETC-MDEGQ------IAAVCRECLQALEFLH---SNQVIHRNIKSDNILLGMDGSV 156
Query: 467 KISDFGL-AKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYKSDVYSYGMMVFEM 524
K++DFG A+I + +M GT ++APEV R +G K D++S G+M EM
Sbjct: 157 KLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEM 210
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 24/181 (13%)
Query: 351 AIKVLNETKGNGEDFIN---EVASISRTSHVNIVTL-LGFCFEGHRRALIYEFVSNGSLE 406
A+KVL + D + E ++ +H +V L F EG + LI +F+ G L
Sbjct: 60 AMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEG-KLYLILDFLRGGDLF 118
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ K + T + +K+ + +A GL++LH + I++ D+KP NILLDE+
Sbjct: 119 TRL-SKEVMFTEEDVKFYL-----AELALGLDHLH---SLGIIYRDLKPENILLDEEGHI 169
Query: 467 KISDFGLAKICEGRESIVSMTGAR---GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
K++DFGL+K E+I A GT+ Y+APEV R G S+ +D +SYG+++FE
Sbjct: 170 KLTDFGLSK-----EAIDHEKKAYSFCGTVEYMAPEVVNRQ-GH-SHSADWWSYGVLMFE 222
Query: 524 M 524
M
Sbjct: 223 M 223
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 350 VAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K+L E + DF E A ++ + NIV LLG C G L++E+++ G L +
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 408 FIHEKHP----------LETNQK--------LKWEVLYKIAVGIARGLEYLHRGCNTRIL 449
F+ P L T + L IA +A G+ YL + +
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFV 196
Query: 450 HFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVS 509
H D+ N L+ E+ KI+DFGL++ + + I ++ PE N +
Sbjct: 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN--RYT 254
Query: 510 YKSDVYSYGMMVFEM 524
+SDV++YG++++E+
Sbjct: 255 TESDVWAYGVVLWEI 269
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVLNETKGNGE-DFINEVASISRTSHVNIVTLLGFCFEGHRRAL--IYEFVSNGSLE 406
VA+K L + + + DF E+ + IV G + R++L + E++ +G L
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ ++H +L L + I +G+EYL + R +H D+ NIL++ +
Sbjct: 103 DFL-QRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHV 154
Query: 467 KISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ ++ V + I + APE N S +SDV+S+G++++E+
Sbjct: 155 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 211
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 348 QNVAIKVLNETKG--NGEDFINEVASISRTSHVNIVTLLGFCFEGHRRAL--IYEFVSNG 403
+ VA+K L G + + E+ + H +I+ G C + ++L + E+V G
Sbjct: 44 EMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
SL ++ +H + Q L A I G+ YLH + +H ++ N+LLD D
Sbjct: 104 SLRDYL-PRHSIGLAQ------LLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDND 153
Query: 464 FCPKISDFGLAK-ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLAK + EG E + + APE C + Y SDV+S+G+ ++
Sbjct: 154 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE--CLKEYKFYYASDVWSFGVTLY 211
Query: 523 EM 524
E+
Sbjct: 212 EL 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVLNETKGNGE-DFINEVASISRTSHVNIVTLLGFCFEGHRRAL--IYEFVSNGSLE 406
VA+K L + + + DF E+ + IV G + R++L + E++ +G L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ ++H +L L + I +G+EYL + R +H D+ NIL++ +
Sbjct: 102 DFL-QRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHV 153
Query: 467 KISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ ++ V + I + APE N S +SDV+S+G++++E+
Sbjct: 154 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 14/179 (7%)
Query: 350 VAIKVLNETKGNGE-DFINEVASISRTSHVNIVTLLGFCFEGHRRAL--IYEFVSNGSLE 406
VA+K L + + + DF E+ + IV G + R++L + E++ +G L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ ++H +L L + I +G+EYL + R +H D+ NIL++ +
Sbjct: 115 DFL-QRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHV 166
Query: 467 KISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ ++ V + I + APE N S +SDV+S+G++++E+
Sbjct: 167 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 223
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 95
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 96 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 148
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 149 GLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 94
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 95 SALTGIPLPLIKSYLFQLL----QGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 148 GLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 93
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 94 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 146
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 147 GLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 44/264 (16%)
Query: 351 AIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALI-------------- 396
AIK + T+ ++EV ++ +H +V E RR +
Sbjct: 35 AIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE--RRNFVKPMTAVKKKSTLFI 92
Query: 397 -YEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKP 455
E+ N +L IH ++ L + W + +I L Y+H + I+H D+KP
Sbjct: 93 QMEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQIL----EALSYIH---SQGIIHRDLKP 144
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIV------------SMTGARGTIGYIAPEVFCR 503
NI +DE KI DFGLAK I+ ++T A GT Y+A EV
Sbjct: 145 MNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD- 203
Query: 504 NFGEVSYKSDVYSYGMMVFEM-----TGEKNNANVAVDRSSEIYF-PHWVYKRLELEEDL 557
G + K D+YS G++ FEM TG + + RS I F P + ++++E+ +
Sbjct: 204 GTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKI 263
Query: 558 GLQGIENEEDKEYARKMILVSLWC 581
I+++ +K + +L S W
Sbjct: 264 IRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 43 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 101
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 102 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 154
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 155 GLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 94
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 95 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 148 GLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 93
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 94 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 146
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 147 GLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 26/184 (14%)
Query: 351 AIKVLN-ETKGNGEDFINEVASISRTSHVNIVTLL-GFCFEGHRRALIYEFVSNGSLEKF 408
A KV++ +++ ED++ E+ ++ H NIV LL F +E + LI EF + G+++
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAV 124
Query: 409 IHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E + PL +Q + + L YLH + +I+H D+K NIL D K
Sbjct: 125 MLELERPLTESQ------IQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIK 175
Query: 468 ISDFGLA----KICEGRESIVSMTGARGTIGYIAPE-VFCRNFGE--VSYKSDVYSYGMM 520
++DFG++ + + R+S + GT ++APE V C + YK+DV+S G+
Sbjct: 176 LADFGVSAKNTRTIQRRDSFI------GTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 521 VFEM 524
+ EM
Sbjct: 230 LIEM 233
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 94
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 95 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 148 GLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 40 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 98
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 99 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 151
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 152 GLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 205
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 93
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 94 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 146
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 147 GLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
E+ EV+ + + H N++TL LI E VS G L F+ +K L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH +I HFD+KP NI+L + P K+ DFGLA +I
Sbjct: 120 F------IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
+G V GT ++APE+ N+ + ++D++S G++ +
Sbjct: 171 DG----VEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRA--LIYEFVSNGSL 405
VA+K L E G + E+ + H +IV G C + ++ L+ E+V GSL
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ +H + Q L A I G+ YLH +H + N+LLD D
Sbjct: 101 RDYL-PRHCVGLAQ------LLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRL 150
Query: 466 PKISDFGLAK-ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGLAK + EG E + + APE C + Y SDV+S+G+ ++E+
Sbjct: 151 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE--CLKECKFYYASDVWSFGVTLYEL 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 94
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 95 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 148 GLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRA--LIYEFVSNGSL 405
VA+K L E G + E+ + H +IV G C + ++ L+ E+V GSL
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ +H + Q L A I G+ YLH +H + N+LLD D
Sbjct: 100 RDYL-PRHCVGLAQ------LLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRL 149
Query: 466 PKISDFGLAK-ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI DFGLAK + EG E + + APE C + Y SDV+S+G+ ++E+
Sbjct: 150 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE--CLKECKFYYASDVWSFGVTLYEL 207
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 24/183 (13%)
Query: 348 QNVAIKVLNE----TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
Q A+KV+++ K + E + EV + + H NI+ L F + L+ E + G
Sbjct: 52 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG 111
Query: 404 SL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD- 461
L ++ I K E + +I + G+ Y+H+ +I+H D+KP N+LL+
Sbjct: 112 ELFDEIISRKRFSEVDAA-------RIIRQVLSGITYMHK---NKIVHRDLKPENLLLES 161
Query: 462 --EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
+D +I DFGL+ E + M GT YIAPEV + E K DV+S G+
Sbjct: 162 KSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHGTYDE---KCDVWSTGV 215
Query: 520 MVF 522
+++
Sbjct: 216 ILY 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
E+ EV+ + + H N++TL LI E VS G L F+ +K L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH +I HFD+KP NI+L + P K+ DFGLA +I
Sbjct: 120 F------IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
+G V GT ++APE+ N+ + ++D++S G++ +
Sbjct: 171 DG----VEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 209
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 350 VAIKVLNETKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K ++ K + + NEV + H N+V + G ++ EF+ G+L
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ T+ ++ E + + + + + L LH ++H DIK +ILL D K+
Sbjct: 239 V-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 288
Query: 469 SDFG----LAKICEGRESIVSMTGARGTIGYIAPEVFCR-NFGEVSYKSDVYSYGMMVFE 523
SDFG ++K R+ +V GT ++APE+ R +G + D++S G+MV E
Sbjct: 289 SDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIE 339
Query: 524 MT 525
M
Sbjct: 340 MV 341
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 26/184 (14%)
Query: 351 AIKVLN-ETKGNGEDFINEVASISRTSHVNIVTLL-GFCFEGHRRALIYEFVSNGSLEKF 408
A KV++ +++ ED++ E+ ++ H NIV LL F +E + LI EF + G+++
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAV 124
Query: 409 IHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E + PL +Q + + L YLH + +I+H D+K NIL D K
Sbjct: 125 MLELERPLTESQ------IQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIK 175
Query: 468 ISDFGLA----KICEGRESIVSMTGARGTIGYIAPE-VFCRNFGE--VSYKSDVYSYGMM 520
++DFG++ + + R+S + GT ++APE V C + YK+DV+S G+
Sbjct: 176 LADFGVSAKNTRXIQRRDSFI------GTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 521 VFEM 524
+ EM
Sbjct: 230 LIEM 233
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 93 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 141
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 200
Query: 524 M 524
M
Sbjct: 201 M 201
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 348 QNVAIKVLNETKG--NGEDFINEVASISRTSHVNIVTLLGFCFEGHRRAL--IYEFVSNG 403
+ VA+K L G + + E+ + H +I+ G C + ++L + E+V G
Sbjct: 44 EMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
SL ++ +H + Q L A I G+ YLH +H ++ N+LLD D
Sbjct: 104 SLRDYL-PRHSIGLAQ------LLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDND 153
Query: 464 FCPKISDFGLAK-ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLAK + EG E + + APE C + Y SDV+S+G+ ++
Sbjct: 154 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE--CLKEYKFYYASDVWSFGVTLY 211
Query: 523 EM 524
E+
Sbjct: 212 EL 213
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
E+ EV+ + + H N++TL LI E VS G L F+ +K L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH +I HFD+KP NI+L + P K+ DFGLA +I
Sbjct: 120 F------IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
+G V GT ++APE+ N+ + ++D++S G++ +
Sbjct: 171 DG----VEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 209
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 351 AIKVLN-ETKGNGEDFINEVASISRTSHVNIVTLL-GFCFEGHRRALIYEFVSNGSLEKF 408
A KV++ +++ ED++ E+ ++ H NIV LL F +E + LI EF + G+++
Sbjct: 39 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAV 97
Query: 409 IHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E + PL +Q + + L YLH + +I+H D+K NIL D K
Sbjct: 98 MLELERPLTESQ------IQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIK 148
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGE--VSYKSDVYSYGMMVFEM 524
++DFG++ R I GT ++APE V C + YK+DV+S G+ + EM
Sbjct: 149 LADFGVSA-KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
E+ EV+ + + H N++TL LI E VS G L F+ +K L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH +I HFD+KP NI+L + P K+ DFGLA +I
Sbjct: 120 F------IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
+G V GT ++APE+ N+ + ++D++S G++ +
Sbjct: 171 DG----VEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
E+ EV+ + + H N++TL LI E VS G L F+ +K L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KIC 477
+ I G+ YLH +I HFD+KP NI+L + P K+ DFGLA +I
Sbjct: 120 F------IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
+G V GT ++APE+ N+ + ++D++S G++ +
Sbjct: 171 DG----VEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITY 209
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 118/287 (41%), Gaps = 34/287 (11%)
Query: 349 NVAIKVLNE---TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA------LIYEF 399
VA+K+L + E+F+ E A + H ++ L+G + +I F
Sbjct: 53 KVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPF 112
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ +G L F+ E L + L + V IA G+EYL + +H D+ N +
Sbjct: 113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCM 169
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
L ED ++DFGL++ + ++ + ++A E N V SDV+++G+
Sbjct: 170 LAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTV--HSDVWAFGV 227
Query: 520 MVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSL 579
++E+ ++ ++EIY + + G ++ E ++ +
Sbjct: 228 TMWEIMTRGQTPYAGIE-NAEIY-------------NYLIGGNRLKQPPECMEEVYDLMY 273
Query: 580 WCIQTNPSDRPSMNRVVEMLEGSLDSLQIPPRPFLLSSGSQPDFSSI 626
C +P RPS + LE L L + LS+ P + +I
Sbjct: 274 QCWSADPKQRPSFTCLRMELENILGHLSV------LSTSQDPLYINI 314
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 350 VAIKVLNETKGNGE-DFINEVASISRTSHVNIVTLLGFCFEGHRRAL--IYEFVSNGSLE 406
VA+K L + + + DF E+ + IV G + R L + E++ +G L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ ++H +L L + I +G+EYL + R +H D+ NIL++ +
Sbjct: 99 DFL-QRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHV 150
Query: 467 KISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGLAK+ ++ V + I + APE N S +SDV+S+G++++E+
Sbjct: 151 KIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 207
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 366 INEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEV 425
+ E+ + + H N+V LL C + R L++EFV + L+ E P L ++V
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL--ELFP----NGLDYQV 125
Query: 426 LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVS 485
+ K I G+ + H + I+H DIKP NIL+ + K+ DFG A+ +
Sbjct: 126 VQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182
Query: 486 MTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
A T Y APE+ G+V Y DV++ G +V EM
Sbjct: 183 DEVA--TRWYRAPELLV---GDVKYGKAVDVWAIGCLVTEM 218
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 24/183 (13%)
Query: 348 QNVAIKVLNE----TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
Q A+KV+++ K + E + EV + + H NI+ L F + L+ E + G
Sbjct: 75 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG 134
Query: 404 SL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD- 461
L ++ I K E + +I + G+ Y+H+ +I+H D+KP N+LL+
Sbjct: 135 ELFDEIISRKRFSEVDAA-------RIIRQVLSGITYMHK---NKIVHRDLKPENLLLES 184
Query: 462 --EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
+D +I DFGL+ E + M GT YIAPEV + E K DV+S G+
Sbjct: 185 KSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHGTYDE---KCDVWSTGV 238
Query: 520 MVF 522
+++
Sbjct: 239 ILY 241
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 351 AIKVLNETKGNGEDFINEVASISRTS---HVNIVTLLGFCFEGH-----RRALIYEFVSN 402
+++V N +G + EVA + R H N+V L+ C + L++E V
Sbjct: 36 SVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ 95
Query: 403 GSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE 462
L ++ + P L E + + RGL++LH C I+H D+KP NIL+
Sbjct: 96 -DLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTS 147
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
K++DFGLA+I + ++ + T+ Y APEV ++ + D++S G +
Sbjct: 148 GGTVKLADFGLARIYSYQMALAPVV---VTLWYRAPEVLLQS--TYATPVDMWSVGCIFA 202
Query: 523 EMTGEK 528
EM K
Sbjct: 203 EMFRRK 208
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 22/202 (10%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGH----RRALIYEFVSNGSL 405
VA+K+ E+ S H N++ + G LI F GSL
Sbjct: 41 VAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSL 100
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHR--------GCNTRILHFDIKPHN 457
++ + W L +A ++RGL YLH G I H D K N
Sbjct: 101 TDYL-------KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKN 153
Query: 458 ILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSY-KSDV 514
+LL D ++DFGLA E + G GT Y+APEV NF ++ + D+
Sbjct: 154 VLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDM 213
Query: 515 YSYGMMVFEMTGEKNNANVAVD 536
Y+ G++++E+ A+ VD
Sbjct: 214 YAMGLVLWELVSRCKAADGPVD 235
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 24/183 (13%)
Query: 348 QNVAIKVLNE----TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
Q A+KV+++ K + E + EV + + H NI+ L F + L+ E + G
Sbjct: 58 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG 117
Query: 404 SL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD- 461
L ++ I K E + +I + G+ Y+H+ +I+H D+KP N+LL+
Sbjct: 118 ELFDEIISRKRFSEVDAA-------RIIRQVLSGITYMHK---NKIVHRDLKPENLLLES 167
Query: 462 --EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
+D +I DFGL+ E + M GT YIAPEV + E K DV+S G+
Sbjct: 168 KSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHGTYDE---KCDVWSTGV 221
Query: 520 MVF 522
+++
Sbjct: 222 ILY 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 350 VAIKVLNETKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K ++ K + + NEV + H N+V + G ++ EF+ G+L
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ T+ ++ E + + + + + L LH ++H DIK +ILL D K+
Sbjct: 119 V-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 168
Query: 469 SDFG----LAKICEGRESIVSMTGARGTIGYIAPEVFCR-NFGEVSYKSDVYSYGMMVFE 523
SDFG ++K R+ +V GT ++APE+ R +G + D++S G+MV E
Sbjct: 169 SDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIE 219
Query: 524 MT 525
M
Sbjct: 220 MV 221
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 24/183 (13%)
Query: 348 QNVAIKVLNE----TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
Q A+KV+++ K + E + EV + + H NI+ L F + L+ E + G
Sbjct: 76 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG 135
Query: 404 SL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD- 461
L ++ I K E + +I + G+ Y+H+ +I+H D+KP N+LL+
Sbjct: 136 ELFDEIISRKRFSEVDAA-------RIIRQVLSGITYMHK---NKIVHRDLKPENLLLES 185
Query: 462 --EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
+D +I DFGL+ E + M GT YIAPEV + E K DV+S G+
Sbjct: 186 KSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHGTYDE---KCDVWSTGV 239
Query: 520 MVF 522
+++
Sbjct: 240 ILY 242
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPL--ETNQK 420
E+ EVA ++ H NIV E ++ ++ G L K I+ + + + +Q
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI 127
Query: 421 LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGR 480
L W V I L+++H + +ILH DIK NI L +D ++ DFG+A++
Sbjct: 128 LDW------FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--- 175
Query: 481 ESIVSMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSS 539
S V + A GT Y++PE+ C N + KSD+++ G +++E+ K+ ++
Sbjct: 176 NSTVELARACIGTPYYLSPEI-CEN-KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL 233
Query: 540 EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVE 597
+ + + L L+ + ++ + NP DRPS+N ++E
Sbjct: 234 VLKIISGSFPPVSLHYSYDLRSLVSQ---------------LFKRNPRDRPSVNSILE 276
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 350 VAIKVLNETKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K ++ K + + NEV + H N+V + G ++ EF+ G+L
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ T+ ++ E + + + + + L LH ++H DIK +ILL D K+
Sbjct: 162 V-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 211
Query: 469 SDFG----LAKICEGRESIVSMTGARGTIGYIAPEVFCR-NFGEVSYKSDVYSYGMMVFE 523
SDFG ++K R+ +V GT ++APE+ R +G + D++S G+MV E
Sbjct: 212 SDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIE 262
Query: 524 MT 525
M
Sbjct: 263 MV 264
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 350 VAIKVLNETKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K ++ K + + NEV + H N+V + G ++ EF+ G+L
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ T+ ++ E + + + + + L LH ++H DIK +ILL D K+
Sbjct: 117 V-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 166
Query: 469 SDFG----LAKICEGRESIVSMTGARGTIGYIAPEVFCR-NFGEVSYKSDVYSYGMMVFE 523
SDFG ++K R+ +V GT ++APE+ R +G + D++S G+MV E
Sbjct: 167 SDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIE 217
Query: 524 MT 525
M
Sbjct: 218 MV 219
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 94
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 95 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ G Y + D++S G + EM +
Sbjct: 148 GLARAFG--VPVRTYTHEVVTLWYRAPEIL---LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+S L+KF+
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDA 97
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 98 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADF 150
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 151 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L FCF+ + + N
Sbjct: 63 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKN 121
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 122 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 171
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 172 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 229
Query: 522 FEMTG 526
+++
Sbjct: 230 YQLVA 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 351 AIKVLNETKGNGEDFINEVASISRTS---HVNIVTLLGFCFEGH-----RRALIYEFVSN 402
+++V N +G + EVA + R H N+V L+ C + L++E V
Sbjct: 36 SVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ 95
Query: 403 GSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE 462
L ++ + P L E + + RGL++LH C I+H D+KP NIL+
Sbjct: 96 -DLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTS 147
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
K++DFGLA+I + ++ + T+ Y APEV ++ + D++S G +
Sbjct: 148 GGTVKLADFGLARIYSYQMALFPVV---VTLWYRAPEVLLQS--TYATPVDMWSVGCIFA 202
Query: 523 EMTGEK 528
EM K
Sbjct: 203 EMFRRK 208
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 350 VAIKVLNETKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K ++ K + + NEV + H N+V + G ++ EF+ G+L
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 107
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ T+ ++ E + + + + + L LH ++H DIK +ILL D K+
Sbjct: 108 V-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 157
Query: 469 SDFG----LAKICEGRESIVSMTGARGTIGYIAPEVFCR-NFGEVSYKSDVYSYGMMVFE 523
SDFG ++K R+ +V GT ++APE+ R +G + D++S G+MV E
Sbjct: 158 SDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIE 208
Query: 524 MT 525
M
Sbjct: 209 MV 210
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 43 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 101
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 102 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 154
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ G Y + D++S G + EM +
Sbjct: 155 GLARAFG--VPVRTYTHEVVTLWYRAPEIL---LGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 350 VAIKVLNETKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
VA+K ++ K + + NEV + H N+V + G ++ EF+ G+L
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 111
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+ T+ ++ E + + + + + L LH ++H DIK +ILL D K+
Sbjct: 112 V-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 161
Query: 469 SDFG----LAKICEGRESIVSMTGARGTIGYIAPEVFCR-NFGEVSYKSDVYSYGMMVFE 523
SDFG ++K R+ +V GT ++APE+ R +G + D++S G+MV E
Sbjct: 162 SDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP---EVDIWSLGIMVIE 212
Query: 524 MT 525
M
Sbjct: 213 MV 214
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+S L+KF+
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDA 95
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 96 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADF 148
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 149 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 21/184 (11%)
Query: 351 AIKVLNETKGN--GEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EK 407
IK +N+ + E E+ + H NI+ + + H ++ E G L E+
Sbjct: 51 VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLER 110
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP- 466
+ + + L + ++ + L Y H + ++H D+KP NIL +D P
Sbjct: 111 IVSAQ---ARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILF-QDTSPH 163
Query: 467 ---KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYG-MMVF 522
KI DFGLA++ + E T A GT Y+APEVF R+ V++K D++S G +M F
Sbjct: 164 SPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVFKRD---VTFKCDIWSAGVVMYF 217
Query: 523 EMTG 526
+TG
Sbjct: 218 LLTG 221
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ + +H N+V G EG+ + L E+ S G L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 93 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 141
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 200
Query: 524 M 524
M
Sbjct: 201 M 201
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ E +G I E++ + H NIV+L+ L++EF+ L+K + E
Sbjct: 53 IRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDE 111
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
+ ++K LY++ G+A ++ RILH D+KP N+L++ D K++DF
Sbjct: 112 NKTGLQDSQIKI-YLYQLLRGVAHCHQH-------RILHRDLKPQNLLINSDGALKLADF 163
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEMTGEK 528
GLA+ + S T T+ Y AP+V G Y + D++S G + EM K
Sbjct: 164 GLARAFG--IPVRSYTHEVVTLWYRAPDVL---MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 31 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 90
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 91 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 139
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 140 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 198
Query: 524 M 524
M
Sbjct: 199 M 199
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
++ L+ N K E + + L+YL N RI+H D+KP NILLDE I+DF
Sbjct: 103 RYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDF 159
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEM 524
+A + I +M G + Y+APE+F R S+ D +S G+ +E+
Sbjct: 160 NIAAMLPRETQITTMAGTK---PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL 210
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA-KICEGRESIVSMTG 488
A I GLE LHR RI++ D+KP NILLD+ +ISD GLA + EG+ ++ G
Sbjct: 292 AAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----TIKG 344
Query: 489 ARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
GT+GY+APEV ++ D ++ G +++EM
Sbjct: 345 RVGTVGYMAPEVVKNE--RYTFSPDWWALGCLLYEM 378
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 93 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 141
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 200
Query: 524 M 524
M
Sbjct: 201 M 201
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 93 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 141
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 200
Query: 524 M 524
M
Sbjct: 201 M 201
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 20/183 (10%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICE--GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
KISDFGLA + RE +++ GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-PVDVWSCGIVL 197
Query: 522 FEM 524
M
Sbjct: 198 TAM 200
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 97
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 98 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 150
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 151 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 38 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 96
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 97 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 149
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 150 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ E +G I E++ + H NIV+L+ L++EF+ L+K + E
Sbjct: 53 IRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDE 111
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
+ ++K LY++ G+A ++ RILH D+KP N+L++ D K++DF
Sbjct: 112 NKTGLQDSQIKI-YLYQLLRGVAHCHQH-------RILHRDLKPQNLLINSDGALKLADF 163
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEMTGEK 528
GLA+ + S T T+ Y AP+V G Y + D++S G + EM K
Sbjct: 164 GLARAFG--IPVRSYTHEVVTLWYRAPDVL---MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 23/182 (12%)
Query: 348 QNVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
Q A+KV+N+ +D + EV + + H NI+ L + ++ E + G
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 405 L-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL--- 460
L ++ I K E + +I + G+ Y+H+ I+H D+KP NILL
Sbjct: 108 LFDEIIKRKRFSEHDAA-------RIIKQVFSGITYMHKH---NIVHRDLKPENILLESK 157
Query: 461 DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMM 520
++D KI DFGL+ + M GT YIAPEV + E K DV+S G++
Sbjct: 158 EKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRGTYDE---KCDVWSAGVI 211
Query: 521 VF 522
++
Sbjct: 212 LY 213
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 94
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 95 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 148 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 38 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 96
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 97 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 149
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 150 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 93 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 141
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 200
Query: 524 M 524
M
Sbjct: 201 M 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 97
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 98 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 150
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 151 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 93 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 141
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 200
Query: 524 M 524
M
Sbjct: 201 M 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 95
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 96 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 148
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 149 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 93 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 141
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 200
Query: 524 M 524
M
Sbjct: 201 M 201
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 366 INEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEV 425
+NE + + + +V+L + +E + + NG KF H H + V
Sbjct: 232 LNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKF-HIYHMGQAGFPEARAV 289
Query: 426 LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA-KICEGRESIV 484
Y A I GLE LHR RI++ D+KP NILLD+ +ISD GLA + EG+
Sbjct: 290 FY--AAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---- 340
Query: 485 SMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
++ G GT+GY+APEV ++ D ++ G +++EM
Sbjct: 341 TIKGRVGTVGYMAPEVVKNE--RYTFSPDWWALGCLLYEM 378
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 94
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 95 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 148 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 93 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 141
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 200
Query: 524 M 524
M
Sbjct: 201 M 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 40 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 98
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 99 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 151
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 152 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 107/260 (41%), Gaps = 51/260 (19%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 97 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 147
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE- 523
KI+DFG + C S T GT+ Y+ PE+ R E K D++S G++ +E
Sbjct: 148 LKIADFGWS--CHAPSS--RRTTLSGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEF 200
Query: 524 MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILV 577
+ G E N R S E FP +V E AR +I
Sbjct: 201 LVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARDLISR 240
Query: 578 SLWCIQTNPSDRPSMNRVVE 597
++ NPS RP + V+E
Sbjct: 241 ---LLKHNPSQRPMLREVLE 257
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 350 VAIK--VLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VA+K L+ +G I E++ + H NIV L ++ L++EF+ N L+K
Sbjct: 33 VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKK 91
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
++ + T + L+ ++ + +GL + H +ILH D+KP N+L+++ K
Sbjct: 92 YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLK 148
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 525
+ DFGLA+ + + + T+ Y AP+V G +Y + D++S G ++ EM
Sbjct: 149 LGDFGLARAFG--IPVNTFSSEVVTLWYRAPDVL---MGSRTYSTSIDIWSCGCILAEMI 203
Query: 526 GEK 528
K
Sbjct: 204 TGK 206
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 18/180 (10%)
Query: 351 AIKVLN-ETKGNGEDFINEVASISRTSHVNIVTLL-GFCFEGHRRALIYEFVSNGSLEKF 408
A KV++ +++ ED++ E+ ++ H NIV LL F +E + LI EF + G+++
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAV 124
Query: 409 IHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+ E + PL +Q + + L YLH + +I+H D+K NIL D K
Sbjct: 125 MLELERPLTESQ------IQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIK 175
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGE--VSYKSDVYSYGMMVFEM 524
++DFG++ + I GT ++APE V C + YK+DV+S G+ + EM
Sbjct: 176 LADFGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 94
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 95 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 148 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 351 AIKVLNETKGNGEDFINEVASISRTS---HVNIVTLLGFCFEGH-----RRALIYEFVSN 402
+++V N +G + EVA + R H N+V L+ C + L++E V
Sbjct: 36 SVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ 95
Query: 403 GSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE 462
L ++ + P L E + + RGL++LH C I+H D+KP NIL+
Sbjct: 96 -DLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTS 147
Query: 463 DFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
K++DFGLA+I + +++ T+ Y APEV ++ + D++S G +
Sbjct: 148 GGTVKLADFGLARIYSYQ---MALDPVVVTLWYRAPEVLLQS--TYATPVDMWSVGCIFA 202
Query: 523 EMTGEK 528
EM K
Sbjct: 203 EMFRRK 208
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 93
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 94 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 146
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 147 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+ VA+K+++ + E+ E+ +H N+V G EG+ + L E+ S G L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 406 EKFIHEK--HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
I P Q+ +++ G+ YLH I H DIKP N+LLDE
Sbjct: 92 FDRIEPDIGMPEPDAQRF----FHQLMAGVV----YLH---GIGITHRDIKPENLLLDER 140
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KISDFGLA + + GT+ Y+APE+ R DV+S G+++
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTA 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 93
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 94 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 146
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 147 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 94
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 95 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 148 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 96/178 (53%), Gaps = 20/178 (11%)
Query: 350 VAIKVLNETKG--NGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-E 406
+A K++ +T+G + E+ NE++ +++ H N++ L + L+ E+V G L +
Sbjct: 117 LAAKII-KTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFD 175
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL-LDEDFC 465
+ I E + L +L + K I G+ ++H+ ILH D+KP NIL ++ D
Sbjct: 176 RIIDESYNL---TELDTILFMK---QICEGIRHMHQ---MYILHLDLKPENILCVNRDAK 226
Query: 466 P-KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA+ + RE + GT ++APEV +F VS+ +D++S G++ +
Sbjct: 227 QIKIIDFGLARRYKPRE---KLKVNFGTPEFLAPEVVNYDF--VSFPTDMWSVGVIAY 279
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 23/182 (12%)
Query: 348 QNVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
Q A+KV+N+ +D + EV + + H NI+ L + ++ E + G
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 405 L-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL--- 460
L ++ I K E + +I + G+ Y+H+ I+H D+KP NILL
Sbjct: 108 LFDEIIKRKRFSEHDAA-------RIIKQVFSGITYMHKH---NIVHRDLKPENILLESK 157
Query: 461 DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMM 520
++D KI DFGL+ + M GT YIAPEV + E K DV+S G++
Sbjct: 158 EKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRGTYDE---KCDVWSAGVI 211
Query: 521 VF 522
++
Sbjct: 212 LY 213
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 23/182 (12%)
Query: 348 QNVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
Q A+KV+N+ +D + EV + + H NI+ L + ++ E + G
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 405 L-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL--- 460
L ++ I K E + +I + G+ Y+H+ I+H D+KP NILL
Sbjct: 108 LFDEIIKRKRFSEHDAA-------RIIKQVFSGITYMHKH---NIVHRDLKPENILLESK 157
Query: 461 DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMM 520
++D KI DFGL+ + M GT YIAPEV + E K DV+S G++
Sbjct: 158 EKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRGTYDE---KCDVWSAGVI 211
Query: 521 VF 522
++
Sbjct: 212 LY 213
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 95
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 96 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 148
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 149 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 348 QNVAIKVLNETKGNGEDFI----NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
VA+K+LN K D + E+ ++ H +I+ L ++ E+VS G
Sbjct: 42 HKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGG 101
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L +I + N +L + ++ I G++Y HR ++H D+KP N+LLD
Sbjct: 102 ELFDYICK------NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAH 152
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KI+DFGL+ + E + + G+ Y APEV + D++S G++++
Sbjct: 153 MNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVISGRL-YAGPEVDIWSSGVILYA 208
Query: 524 M 524
+
Sbjct: 209 L 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 38 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 96
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 97 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADF 149
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 150 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+KF+
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA 95
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 96 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADF 148
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 149 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 366 INEVASISRTS---HVNIVTLLGFCFEGH-----RRALIYEFVSNGSLEKFIHEKHPLET 417
+ EVA + R H N+V L+ C + L++E V L ++ + P
Sbjct: 59 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP--- 114
Query: 418 NQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC 477
L E + + RGL++LH C I+H D+KP NIL+ K++DFGLA+I
Sbjct: 115 -PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 170
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ +++T T+ Y APEV ++ + D++S G + EM K
Sbjct: 171 SYQ---MALTPVVVTLWYRAPEVLLQS--TYATPVDMWSVGCIFAEMFRRK 216
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 28/182 (15%)
Query: 351 AIKVLNE----TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL- 405
AIK++ + T N ++EVA + + H NI+ L F + L+ E G L
Sbjct: 33 AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 92
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---E 462
++ I + E + + I + G YLH+ I+H D+KP N+LL+
Sbjct: 93 DEIILRQKFSEVDAAV-------IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSR 142
Query: 463 DFCPKISDFGLAKICE--GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMM 520
D KI DFGL+ E G+ M GT YIAPEV + + E K DV+S G++
Sbjct: 143 DALIKIVDFGLSAHFEVGGK-----MKERLGTAYYIAPEVLRKKYDE---KCDVWSCGVI 194
Query: 521 VF 522
++
Sbjct: 195 LY 196
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 31/190 (16%)
Query: 352 IKVLNETKGNGEDFINEVASISRTS---HVNIVTLLGFCFEGH-----RRALIYEFVSNG 403
++V +G I EVA + H N+V L C + L++E V
Sbjct: 45 VRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD 104
Query: 404 ---SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL 460
L+K P ET + + +++L RGL++LH + R++H D+KP NIL+
Sbjct: 105 LTTYLDKVPEPGVPTETIKDMMFQLL--------RGLDFLH---SHRVVHRDLKPQNILV 153
Query: 461 DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYG 518
K++DFGLA+I + +++T T+ Y APEV ++ SY + D++S G
Sbjct: 154 TSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQS----SYATPVDLWSVG 206
Query: 519 MMVFEMTGEK 528
+ EM K
Sbjct: 207 CIFAEMFRRK 216
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 28/182 (15%)
Query: 351 AIKVLNE----TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL- 405
AIK++ + T N ++EVA + + H NI+ L F + L+ E G L
Sbjct: 50 AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 109
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---E 462
++ I + E + + I + G YLH+ I+H D+KP N+LL+
Sbjct: 110 DEIILRQKFSEVDAAV-------IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSR 159
Query: 463 DFCPKISDFGLAKICE--GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMM 520
D KI DFGL+ E G+ M GT YIAPEV + + E K DV+S G++
Sbjct: 160 DALIKIVDFGLSAHFEVGGK-----MKERLGTAYYIAPEVLRKKYDE---KCDVWSCGVI 211
Query: 521 VF 522
++
Sbjct: 212 LY 213
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 45/202 (22%)
Query: 354 VLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEG----------------------- 390
V+ K N E EV ++++ HVNIV G C++G
Sbjct: 41 VIRRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSK 99
Query: 391 -HRRA------LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 443
R+ + EF G+LE++I ++ + ++ L E+ +I +G++Y+H
Sbjct: 100 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT----KGVDYIH-- 153
Query: 444 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFC 502
+ +++H D+KP NI L + KI DFGL + T ++GT+ Y++PE +
Sbjct: 154 -SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISS 209
Query: 503 RNFGEVSYKSDVYSYGMMVFEM 524
+++G+ + D+Y+ G+++ E+
Sbjct: 210 QDYGK---EVDLYALGLILAEL 228
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 24/192 (12%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + E F+ E ++ + H +IV L+G E + +I E + G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 408 FIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ K+ L+ L +LY A ++ L YL + R +H DI N+L+ + C
Sbjct: 100 FLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCV 150
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-- 524
K+ DFGL++ E + + + I ++APE NF + SDV+ +G+ ++E+
Sbjct: 151 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 207
Query: 525 ------TGEKNN 530
G KNN
Sbjct: 208 HGVKPFQGVKNN 219
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 22/191 (11%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + E F+ E ++ + H +IV L+G E + +I E + G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + + L +LY A ++ L YL + R +H DI N+L+ + C K
Sbjct: 100 FLQVR---KFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 151
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM--- 524
+ DFGL++ E + G + I ++APE NF + SDV+ +G+ ++E+
Sbjct: 152 LGDFGLSRYMEDSTXXKASKG-KLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILMH 208
Query: 525 -----TGEKNN 530
G KNN
Sbjct: 209 GVKPFQGVKNN 219
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 24/192 (12%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + E F+ E ++ + H +IV L+G E + +I E + G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 408 FIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ K+ L+ L +LY A ++ L YL + R +H DI N+L+ + C
Sbjct: 100 FLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCV 150
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-- 524
K+ DFGL++ E + + + I ++APE NF + SDV+ +G+ ++E+
Sbjct: 151 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 207
Query: 525 ------TGEKNN 530
G KNN
Sbjct: 208 HGVKPFQGVKNN 219
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 31/190 (16%)
Query: 352 IKVLNETKGNGEDFINEVASISRTS---HVNIVTLLGFCFEGH-----RRALIYEFVSNG 403
++V +G I EVA + H N+V L C + L++E V
Sbjct: 45 VRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD 104
Query: 404 ---SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL 460
L+K P ET + + +++L RGL++LH + R++H D+KP NIL+
Sbjct: 105 LTTYLDKVPEPGVPTETIKDMMFQLL--------RGLDFLH---SHRVVHRDLKPQNILV 153
Query: 461 DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYG 518
K++DFGLA+I + +++T T+ Y APEV ++ SY + D++S G
Sbjct: 154 TSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQS----SYATPVDLWSVG 206
Query: 519 MMVFEMTGEK 528
+ EM K
Sbjct: 207 CIFAEMFRRK 216
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 116
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 117 GCLLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ S SD+++ G ++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK--SASKSSDLWALGCII 224
Query: 522 FEMTG 526
+++
Sbjct: 225 YQLVA 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 31/190 (16%)
Query: 352 IKVLNETKGNGEDFINEVASISRTS---HVNIVTLLGFCFEGH-----RRALIYEFVSNG 403
++V +G I EVA + H N+V L C + L++E V
Sbjct: 45 VRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD 104
Query: 404 ---SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL 460
L+K P ET + + +++L RGL++LH + R++H D+KP NIL+
Sbjct: 105 LTTYLDKVPEPGVPTETIKDMMFQLL--------RGLDFLH---SHRVVHRDLKPQNILV 153
Query: 461 DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYG 518
K++DFGLA+I + +++T T+ Y APEV ++ SY + D++S G
Sbjct: 154 TSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQS----SYATPVDLWSVG 206
Query: 519 MMVFEMTGEK 528
+ EM K
Sbjct: 207 CIFAEMFRRK 216
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 24/192 (12%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + E F+ E ++ + H +IV L+G E + +I E + G L
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 102
Query: 408 FIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ K+ L+ L +LY A ++ L YL + R +H DI N+L+ + C
Sbjct: 103 FLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCV 153
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-- 524
K+ DFGL++ E + + + I ++APE NF + SDV+ +G+ ++E+
Sbjct: 154 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 210
Query: 525 ------TGEKNN 530
G KNN
Sbjct: 211 HGVKPFQGVKNN 222
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 37/261 (14%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
H + L + FE + + NG ++ H + E N + I G
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRY-HIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
LE+LH+ I++ D+KP N+LLD+D +ISD GLA E + G GT G++
Sbjct: 302 LEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFM 356
Query: 497 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEED 556
APE+ E + D ++ G+ ++EM + R ++ + EL++
Sbjct: 357 APELLLGE--EYDFSVDYFALGVTLYEMIAARGPFRA---RGEKV-------ENKELKQR 404
Query: 557 LGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDSLQIPPRPFLLS 616
+ Q + + A K +L +Q +P R +GS D L+
Sbjct: 405 VLEQAVTYPDKFSPASKDFCEAL--LQKDPEKRLGFR------DGSCDGLR--------- 447
Query: 617 SGSQPDFSSILVRQTESSMAT 637
+ P F I RQ E+ M T
Sbjct: 448 --THPLFRDISWRQLEAGMLT 466
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 395 LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
++ E+V +L +H + P+ + ++ IA + L+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 143
Query: 455 PHNILLDEDFCPKISDFGLAK-ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSD 513
P NIL+ K+ DFG+A+ I + S+ GT Y++PE + V +SD
Sbjct: 144 PANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 514 VYSYGMMVFE-MTGE 527
VYS G +++E +TGE
Sbjct: 202 VYSLGCVLYEVLTGE 216
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 37/261 (14%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
H + L + FE + + NG ++ H + E N + I G
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRY-HIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
LE+LH+ I++ D+KP N+LLD+D +ISD GLA E + G GT G++
Sbjct: 302 LEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFM 356
Query: 497 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEED 556
APE+ E + D ++ G+ ++EM + R ++ + EL++
Sbjct: 357 APELLLGE--EYDFSVDYFALGVTLYEMIAARGPFRA---RGEKV-------ENKELKQR 404
Query: 557 LGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDSLQIPPRPFLLS 616
+ Q + + A K +L +Q +P R +GS D L+
Sbjct: 405 VLEQAVTYPDKFSPASKDFCEAL--LQKDPEKRLGFR------DGSCDGLR--------- 447
Query: 617 SGSQPDFSSILVRQTESSMAT 637
+ P F I RQ E+ M T
Sbjct: 448 --THPLFRDISWRQLEAGMLT 466
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 97/189 (51%), Gaps = 32/189 (16%)
Query: 354 VLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEG-----------HRRA------LI 396
V+ K N E EV ++++ HVNIV G C++G R+ +
Sbjct: 40 VIKRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQ 98
Query: 397 YEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPH 456
EF G+LE++I ++ + ++ L E+ +I +G++Y+H + ++++ D+KP
Sbjct: 99 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT----KGVDYIH---SKKLINRDLKPS 151
Query: 457 NILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVY 515
NI L + KI DFGL + ++GT+ Y++PE + +++G+ + D+Y
Sbjct: 152 NIFLVDTKQVKIGDFGLVTSLKNDG---KRXRSKGTLRYMSPEQISSQDYGK---EVDLY 205
Query: 516 SYGMMVFEM 524
+ G+++ E+
Sbjct: 206 ALGLILAEL 214
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 24/192 (12%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + E F+ E ++ + H +IV L+G E + +I E + G L
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 127
Query: 408 FIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ K+ L+ L +LY A ++ L YL + R +H DI N+L+ + C
Sbjct: 128 FLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCV 178
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-- 524
K+ DFGL++ E + + + I ++APE NF + SDV+ +G+ ++E+
Sbjct: 179 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 235
Query: 525 ------TGEKNN 530
G KNN
Sbjct: 236 HGVKPFQGVKNN 247
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 24/192 (12%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + E F+ E ++ + H +IV L+G E + +I E + G L
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 96
Query: 408 FIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ K+ L+ L +LY A ++ L YL + R +H DI N+L+ + C
Sbjct: 97 FLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCV 147
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-- 524
K+ DFGL++ E + + + I ++APE NF + SDV+ +G+ ++E+
Sbjct: 148 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 204
Query: 525 ------TGEKNN 530
G KNN
Sbjct: 205 HGVKPFQGVKNN 216
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 37/261 (14%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
H + L + FE + + NG ++ H + E N + I G
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRY-HIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
LE+LH+ I++ D+KP N+LLD+D +ISD GLA E + G GT G++
Sbjct: 302 LEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFM 356
Query: 497 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEED 556
APE+ E + D ++ G+ ++EM + R ++ + EL++
Sbjct: 357 APELLLGE--EYDFSVDYFALGVTLYEMIAARGPFRA---RGEKV-------ENKELKQR 404
Query: 557 LGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDSLQIPPRPFLLS 616
+ Q + + A K +L +Q +P R +GS D L+
Sbjct: 405 VLEQAVTYPDKFSPASKDFCEAL--LQKDPEKRLGFR------DGSCDGLR--------- 447
Query: 617 SGSQPDFSSILVRQTESSMAT 637
+ P F I RQ E+ M T
Sbjct: 448 --THPLFRDISWRQLEAGMLT 466
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 24/192 (12%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + E F+ E ++ + H +IV L+G E + +I E + G L
Sbjct: 46 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 104
Query: 408 FIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ K+ L+ L +LY A ++ L YL + R +H DI N+L+ + C
Sbjct: 105 FLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCV 155
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-- 524
K+ DFGL++ E + + + I ++APE NF + SDV+ +G+ ++E+
Sbjct: 156 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 212
Query: 525 ------TGEKNN 530
G KNN
Sbjct: 213 HGVKPFQGVKNN 224
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 24/192 (12%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + E F+ E ++ + H +IV L+G E + +I E + G L
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 101
Query: 408 FIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F+ K+ L+ L +LY A ++ L YL + R +H DI N+L+ + C
Sbjct: 102 FLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCV 152
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-- 524
K+ DFGL++ E + + + I ++APE NF + SDV+ +G+ ++E+
Sbjct: 153 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILM 209
Query: 525 ------TGEKNN 530
G KNN
Sbjct: 210 HGVKPFQGVKNN 221
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+S L+ F+
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDA 97
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 98 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 150
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 151 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 37/261 (14%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
H + L + FE + + NG ++ H + E N + I G
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRY-HIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
LE+LH+ I++ D+KP N+LLD+D +ISD GLA E + G GT G++
Sbjct: 302 LEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFM 356
Query: 497 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEED 556
APE+ E + D ++ G+ ++EM + R ++ + EL++
Sbjct: 357 APELLLGE--EYDFSVDYFALGVTLYEMIAARGPFRA---RGEKV-------ENKELKQR 404
Query: 557 LGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVEMLEGSLDSLQIPPRPFLLS 616
+ Q + + A K +L +Q +P R +GS D L+
Sbjct: 405 VLEQAVTYPDKFSPASKDFCEAL--LQKDPEKRLGFR------DGSCDGLR--------- 447
Query: 617 SGSQPDFSSILVRQTESSMAT 637
+ P F I RQ E+ M T
Sbjct: 448 --THPLFRDISWRQLEAGMLT 466
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+S L+ F+
Sbjct: 38 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDA 96
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 97 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 149
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 150 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 395 LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
++ E+V +L +H + P+ + ++ IA + L+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 143
Query: 455 PHNILLDEDFCPKISDFGLAK-ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSD 513
P NI++ K+ DFG+A+ I + S+ GT Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 514 VYSYGMMVFE-MTGE 527
VYS G +++E +TGE
Sbjct: 202 VYSLGCVLYEVLTGE 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 15/134 (11%)
Query: 348 QNVAIKVLN-ETKGNGEDFIN-----EVASISRTSHVNIVTLLGFCFEGHRRALIYEFVS 401
Q VAIK + + +D IN E+ + SH NI+ LL +L+++F+
Sbjct: 36 QIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME 95
Query: 402 NGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
LE I + + T +K +L + +GLEYLH+ ILH D+KP+N+LLD
Sbjct: 96 T-DLEVIIKDNSLVLTPSHIKAYMLMTL-----QGLEYLHQHW---ILHRDLKPNNLLLD 146
Query: 462 EDFCPKISDFGLAK 475
E+ K++DFGLAK
Sbjct: 147 ENGVLKLADFGLAK 160
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 399 FVSNGSLEKFIHEKHPLETNQK-LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 457
FV SL E+ P + + L E L + +A+G+E+L + + +H D+ N
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 228
Query: 458 ILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVYS 516
ILL E KI DFGLA+ V AR + ++APE +F R + + +SDV+S
Sbjct: 229 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWS 285
Query: 517 YGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
+G++++E+ G V +D +RL+ +G +M
Sbjct: 286 FGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYTTPEM 330
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEML 599
L C PS RP+ + +VE L
Sbjct: 331 YQTMLDCWHGEPSQRPTFSELVEHL 355
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 404 SLEKFIHEK 412
+L ++ K
Sbjct: 118 NLSTYLRSK 126
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 395 LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
++ E+V +L +H + P+ + ++ IA + L+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 143
Query: 455 PHNILLDEDFCPKISDFGLAK-ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSD 513
P NI++ K+ DFG+A+ I + S+ GT Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 514 VYSYGMMVFE-MTGE 527
VYS G +++E +TGE
Sbjct: 202 VYSLGCVLYEVLTGE 216
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 399 FVSNGSLEKFIHEKHPLETNQK-LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 457
FV SL E+ P + + L E L + +A+G+E+L + + +H D+ N
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 230
Query: 458 ILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVYS 516
ILL E KI DFGLA+ V AR + ++APE +F R + + +SDV+S
Sbjct: 231 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWS 287
Query: 517 YGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
+G++++E+ G V +D +RL+ +G +M
Sbjct: 288 FGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYTTPEM 332
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEML 599
L C PS RP+ + +VE L
Sbjct: 333 YQTMLDCWHGEPSQRPTFSELVEHL 357
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 404 SLEKFIHEK 412
+L ++ K
Sbjct: 120 NLSTYLRSK 128
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 395 LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
++ E+V +L +H + P+ + ++ IA + L+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 143
Query: 455 PHNILLDEDFCPKISDFGLAK-ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSD 513
P NI++ K+ DFG+A+ I + S+ GT Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 514 VYSYGMMVFE-MTGE 527
VYS G +++E +TGE
Sbjct: 202 VYSLGCVLYEVLTGE 216
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 395 LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
++ E+V +L +H + P+ + ++ IA + L+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 143
Query: 455 PHNILLDEDFCPKISDFGLAK-ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSD 513
P NI++ K+ DFG+A+ I + S+ GT Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 514 VYSYGMMVFE-MTGE 527
VYS G +++E +TGE
Sbjct: 202 VYSLGCVLYEVLTGE 216
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 33/199 (16%)
Query: 350 VAIKVLNETKGNGEDFINE--VASISRTSHVNIVTLL----GFCFEGHRR-ALIYEFVSN 402
VA+KV + N ++FINE + + H NI + +G L+ E+ N
Sbjct: 39 VAVKVF--SFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPN 96
Query: 403 GSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLH----RGCNTR--ILHFDIKPH 456
GSL K++ L T+ W ++A + RGL YLH RG + + I H D+
Sbjct: 97 GSLXKYLS----LHTSD---WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSR 149
Query: 457 NILLDEDFCPKISDFGLA------KICEGRESIVSMTGARGTIGYIAPEVF-----CRNF 505
N+L+ D ISDFGL+ ++ E + GTI Y+APEV R+
Sbjct: 150 NVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDX 209
Query: 506 GEVSYKSDVYSYGMMVFEM 524
+ D+Y+ G++ +E+
Sbjct: 210 ESALKQVDMYALGLIYWEI 228
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 381 VTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYL 440
VT G F + E + + SL+KF K ++ Q + ++L KIAV I + LE+L
Sbjct: 113 VTFYGALFREGDVWICMELM-DTSLDKFY--KQVIDKGQTIPEDILGKIAVSIVKALEHL 169
Query: 441 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEV 500
H + ++H D+KP N+L++ K+ DFG++ V+ T G Y+APE
Sbjct: 170 HSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKTIDAGCKPYMAPER 224
Query: 501 FCRNFGEVSY--KSDVYSYGMMVFEMT 525
+ Y KSD++S G+ + E+
Sbjct: 225 INPELNQKGYSVKSDIWSLGITMIELA 251
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 348 QNVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
Q VAIK + + + ++ I E++ + + ++V G F+ ++ E+ GS+
Sbjct: 55 QIVAIKQV-PVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD 113
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
I + N+ L + + I +GLEYLH R +H DIK NILL+ + K
Sbjct: 114 IIRLR-----NKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAK 165
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYK--SDVYSYGMMVFEM 524
++DFG+A + + + GT ++APEV E+ Y +D++S G+ EM
Sbjct: 166 LADFGVA--GQLTDXMAKRNXVIGTPFWMAPEV----IQEIGYNCVADIWSLGITAIEM 218
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 350 VAIKVLNETKGN-GEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
+AIK + E + E+A H NIV LG E + E V GSL
Sbjct: 50 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 109
Query: 409 IHEK-HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE-DFCP 466
+ K PL+ N+ + + I GL+YLH + +I+H DIK N+L++
Sbjct: 110 LRSKWGPLKDNE----QTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVL 162
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
KISDFG +K G GT+ Y+APE+ + +D++S G + EM
Sbjct: 163 KISDFGTSKRLAGINPCTETF--TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT 220
Query: 527 EK 528
K
Sbjct: 221 GK 222
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 399 FVSNGSLEKFIHEKHPLETNQK-LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 457
FV SL E+ P + + L E L + +A+G+E+L + + +H D+ N
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 221
Query: 458 ILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVYS 516
ILL E KI DFGLA+ V AR + ++APE +F R + + +SDV+S
Sbjct: 222 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWS 278
Query: 517 YGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
+G++++E+ G V +D +RL+ +G +M
Sbjct: 279 FGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYTTPEM 323
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEML 599
L C PS RP+ + +VE L
Sbjct: 324 YQTMLDCWHGEPSQRPTFSELVEHL 348
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 51 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 110
Query: 404 SLEKFIHEK 412
+L ++ K
Sbjct: 111 NLSTYLRSK 119
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
NVA+K + T N E F++E + H +IV L+G E +I E G L
Sbjct: 38 NVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL- 95
Query: 407 KFIHEKHPLETNQ-KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H LE N+ LK L ++ I + + YL + +H DI NIL+ C
Sbjct: 96 -----GHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPEC 147
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K+ DFGL++ E E + R I +++PE NF + SDV+ + + ++E+
Sbjct: 148 VKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEI 203
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 399 FVSNGSLEKFIHEKHPLETNQK-LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 457
FV SL E+ P + + L E L + +A+G+E+L + + +H D+ N
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 223
Query: 458 ILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVYS 516
ILL E KI DFGLA+ V AR + ++APE +F R + + +SDV+S
Sbjct: 224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWS 280
Query: 517 YGMMVFEM--TGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
+G++++E+ G V +D +RL+ +G +M
Sbjct: 281 FGVLLWEIFSLGASPYPGVKIDEE--------FCRRLK-------EGTRMRAPDYTTPEM 325
Query: 575 ILVSLWCIQTNPSDRPSMNRVVEML 599
L C PS RP+ + +VE L
Sbjct: 326 YQTMLDCWHGEPSQRPTFSELVEHL 350
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSH-VNIVTLLGFCFE-GHRRALIYEFVSNG 403
+ VA+K+L E + E ++E+ + H +N+V LLG C + G +I EF G
Sbjct: 53 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112
Query: 404 SLEKFIHEK 412
+L ++ K
Sbjct: 113 NLSTYLRSK 121
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
NVA+K + T N E F++E + H +IV L+G E +I E G L
Sbjct: 54 NVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL- 111
Query: 407 KFIHEKHPLETNQ-KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H LE N+ LK L ++ I + + YL + +H DI NIL+ C
Sbjct: 112 -----GHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPEC 163
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K+ DFGL++ E E + R I +++PE NF + SDV+ + + ++E+
Sbjct: 164 VKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEI 219
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++E V L+KF+
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDA 97
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 98 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 150
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 151 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVL 426
+E +S +H I+ + G + + +I +++ G L L +Q+ V
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSL------LRKSQRFPNPVA 108
Query: 427 YKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSM 486
A + LEYLH + I++ D+KP NILLD++ KI+DFG AK +
Sbjct: 109 KFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC- 164
Query: 487 TGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
GT YIAPEV + D +S+G++++EM
Sbjct: 165 ----GTPDYIAPEVVSTK--PYNKSIDWWSFGILIYEM 196
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++E V L+ F+
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDA 93
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 94 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 146
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 147 GLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 24/184 (13%)
Query: 348 QNVAIKVLNETKGNGEDFIN---EVASISRTSHVNIVTL-LGFCFEGHRRALIYEFVSNG 403
Q A+KVL + D + E + +H IV L F EG + LI +F+ G
Sbjct: 53 QLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGG 111
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L + K + T + +K+ + +A L++LH + I++ D+KP NILLDE+
Sbjct: 112 DLFTRL-SKEVMFTEEDVKFYL-----AELALALDHLH---SLGIIYRDLKPENILLDEE 162
Query: 464 FCPKISDFGLAKICEGRESIVSMTGAR---GTIGYIAPEVFCRNFGEVSYKSDVYSYGMM 520
K++DFGL+K ESI A GT+ Y+APEV R S +D +S+G++
Sbjct: 163 GHIKLTDFGLSK-----ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS--ADWWSFGVL 215
Query: 521 VFEM 524
+FEM
Sbjct: 216 MFEM 219
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 348 QNVAIKVLNETKGNGED--FINEVASISRTSHVN-IVTLLGFCFEGHRRALIYEFVSNGS 404
Q +A+K + T E + ++ + R+S IV G F + E +S S
Sbjct: 48 QIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-S 106
Query: 405 LEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+KF + + + + E+L KI + + L +L N +I+H DIKP NILLD
Sbjct: 107 FDKFYKYVYSV-LDDVIPEEILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSG 163
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSY--KSDVYSYGMMVF 522
K+ DFG++ + +SI A G Y+APE + Y +SDV+S G+ ++
Sbjct: 164 NIKLCDFGISG--QLVDSIAKTRDA-GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLY 220
Query: 523 EMTGEKNNANVAVDRSSEIYFPHW--VYKRLELEEDLGLQGIENEEDKEYARKMILVSLW 580
E+ + +P W V+ +L + N E++E++ I
Sbjct: 221 ELA------------TGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNL 268
Query: 581 CIQTNPSDRPSMNRVVE 597
C+ + S RP +++
Sbjct: 269 CLTKDESKRPKYKELLK 285
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 116
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 117 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ S SD+++ G ++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKS--SDLWALGCII 224
Query: 522 FEMTG 526
+++
Sbjct: 225 YQLVA 229
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 349 NVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLE 406
NVA+K + T N E F++E + H +IV L+G E +I E G L
Sbjct: 42 NVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL- 99
Query: 407 KFIHEKHPLETNQ-KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
H LE N+ LK L ++ I + + YL + +H DI NIL+ C
Sbjct: 100 -----GHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPEC 151
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K+ DFGL++ E E + R I +++PE NF + SDV+ + + ++E+
Sbjct: 152 VKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEI 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 395 LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
++ E+V +L +H + P+ + ++ IA + L+ I+H D+K
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 160
Query: 455 PHNILLDEDFCPKISDFGLAK-ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSD 513
P NI++ K+ DFG+A+ I + S+ GT Y++PE + V +SD
Sbjct: 161 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 218
Query: 514 VYSYGMMVFE-MTGE 527
VYS G +++E +TGE
Sbjct: 219 VYSLGCVLYEVLTGE 233
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 353 KVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFE----GHRRALIYEFVSNGSLEKF 408
++L + + E+ E +H NI+ L+ +C H L+ F G+L
Sbjct: 61 RILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNE 120
Query: 409 IH---EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
I +K T ++ W +L GI RGLE +H H D+KP NILL ++
Sbjct: 121 IERLKDKGNFLTEDQILWLLL-----GICRGLEAIHAKGYA---HRDLKPTNILLGDEGQ 172
Query: 466 PKISDFG-LAKIC---EGRESIVSM---TGARGTIGYIAPEVF-CRNFGEVSYKSDVYSY 517
P + D G + + C EG +++ R TI Y APE+F ++ + ++DV+S
Sbjct: 173 PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSL 232
Query: 518 GMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILV 577
G +++ M + ++ + + L ++ L I A +L
Sbjct: 233 GCVLYAMMFGEGPYDMVFQKGDSV--------ALAVQNQL---SIPQSPRHSSALWQLLN 281
Query: 578 SLWCIQTNPSDRPSMNRVVEMLEGSLDSLQIPPRP 612
S+ + +P RP + +L L++LQ PP P
Sbjct: 282 SM--MTVDPHQRPH----IPLLLSQLEALQ-PPAP 309
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+ F+
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDA 97
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 98 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADF 150
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 151 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 24/184 (13%)
Query: 348 QNVAIKVLNETKGNGEDFIN---EVASISRTSHVNIVTL-LGFCFEGHRRALIYEFVSNG 403
Q A+KVL + D + E + +H IV L F EG + LI +F+ G
Sbjct: 54 QLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGG 112
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L + K + T + +K+ + +A L++LH + I++ D+KP NILLDE+
Sbjct: 113 DLFTRL-SKEVMFTEEDVKFYL-----AELALALDHLH---SLGIIYRDLKPENILLDEE 163
Query: 464 FCPKISDFGLAKICEGRESIVSMTGAR---GTIGYIAPEVFCRNFGEVSYKSDVYSYGMM 520
K++DFGL+K ESI A GT+ Y+APEV R S +D +S+G++
Sbjct: 164 GHIKLTDFGLSK-----ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS--ADWWSFGVL 216
Query: 521 VFEM 524
+FEM
Sbjct: 217 MFEM 220
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 114
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 115 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 164
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK--SACKSSDLWALGCII 222
Query: 522 FEMTG 526
+++
Sbjct: 223 YQLVA 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 24/184 (13%)
Query: 348 QNVAIKVLNETKGNGEDFIN---EVASISRTSHVNIVTL-LGFCFEGHRRALIYEFVSNG 403
Q A+KVL + D + E + +H IV L F EG + LI +F+ G
Sbjct: 53 QLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGG 111
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L + K + T + +K+ + +A L++LH + I++ D+KP NILLDE+
Sbjct: 112 DLFTRL-SKEVMFTEEDVKFYL-----AELALALDHLH---SLGIIYRDLKPENILLDEE 162
Query: 464 FCPKISDFGLAKICEGRESIVSMTGAR---GTIGYIAPEVFCRNFGEVSYKSDVYSYGMM 520
K++DFGL+K ESI A GT+ Y+APEV R S +D +S+G++
Sbjct: 163 GHIKLTDFGLSK-----ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS--ADWWSFGVL 215
Query: 521 VFEM 524
+FEM
Sbjct: 216 MFEM 219
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 107/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G +
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV 100
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
K L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 101 YK------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 151
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 152 LKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 200
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 240
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 241 LISR---LLKHNPSQRPMLREVLE 261
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 106/263 (40%), Gaps = 57/263 (21%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G +
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV 100
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
K L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 101 YK------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 151
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
KI+DFG S+ + + R GT+ Y+ PE+ + K D++S G++
Sbjct: 152 LKIADFGW--------SVHAPSSRRXXLXGTLDYLPPEMIEGRMHDE--KVDLWSLGVLC 201
Query: 522 FE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
+E + G E N R S E FP +V E AR +
Sbjct: 202 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARDL 241
Query: 575 ILVSLWCIQTNPSDRPSMNRVVE 597
I ++ NPS RP + V+E
Sbjct: 242 ISR---LLKHNPSQRPMLREVLE 261
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 350 VAIKVLNETKGN-GEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
+AIK + E + E+A H NIV LG E + E V GSL
Sbjct: 36 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 95
Query: 409 IHEK-HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE-DFCP 466
+ K PL+ N+ + + I GL+YLH + +I+H DIK N+L++
Sbjct: 96 LRSKWGPLKDNE----QTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVL 148
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
KISDFG +K G GT+ Y+APE+ + +D++S G + EM
Sbjct: 149 KISDFGTSKRLAGINPCTETF--TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT 206
Query: 527 EK 528
K
Sbjct: 207 GK 208
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 59 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 117
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 118 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 167
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK--SACKSSDLWALGCII 225
Query: 522 FEMTG 526
+++
Sbjct: 226 YQLVA 230
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 22/191 (11%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + E F+ E ++ + H +IV L+G E + +I E + G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + + L +LY A ++ L YL + R +H DI N+L+ C K
Sbjct: 100 FLQVR---KFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVK 151
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM--- 524
+ DFGL++ E + + + I ++APE NF + SDV+ +G+ ++E+
Sbjct: 152 LGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILMH 208
Query: 525 -----TGEKNN 530
G KNN
Sbjct: 209 GVKPFQGVKNN 219
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 365 FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
I E+ + + IV G + ++ E + GSL++ + E +++ E
Sbjct: 61 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA------KRIPEE 114
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIV 484
+L K+++ + RGL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 115 ILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSG-----QLID 167
Query: 485 SMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
SM + GT Y+APE S +SD++S G+ + E+
Sbjct: 168 SMANSFVGTRSYMAPERLQGT--HYSVQSDIWSMGLSLVELA 207
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 55 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 113
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 114 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 163
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 164 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK--SACKSSDLWALGCII 221
Query: 522 FEMTG 526
+++
Sbjct: 222 YQLVA 226
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 35 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 93
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 94 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 143
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 144 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 201
Query: 522 FEMTG 526
+++
Sbjct: 202 YQLVA 206
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
E+ NE++ + H NI+ L + L+ EF G L + I +H +
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA- 149
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED---FCPKISDFGLAKICEG 479
I I G+ YLH+ I+H DIKP NILL+ KI DFGL+
Sbjct: 150 -----NIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK 201
Query: 480 RESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
+ GT YIAPEV + + E K DV+S G++++
Sbjct: 202 D---YKLRDRLGTAYYIAPEVLKKKYNE---KCDVWSCGVIMY 238
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 36 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 94
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 95 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 144
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 145 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 202
Query: 522 FEMTG 526
+++
Sbjct: 203 YQLVA 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 33 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 91
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 92 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 141
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 142 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 199
Query: 522 FEMTG 526
+++
Sbjct: 200 YQLVA 204
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 34 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 92
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 93 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 142
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 143 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 200
Query: 522 FEMTG 526
+++
Sbjct: 201 YQLVA 205
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 21/180 (11%)
Query: 351 AIKVLNETKGNGEDFINEVASISR----TSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSL 405
A+K+L + +D + + SR T H +T L + F+ H R + E+ + G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL 92
Query: 406 EKFIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
F H + + T ++ ++ I LEYLH + +++ DIK N++LD+D
Sbjct: 93 --FFHLSRERVFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDG 142
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG +M GT Y+APEV N + D + G++++EM
Sbjct: 143 HIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 198
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
I++ ET+G I E++ + +H NIV LL ++ L++EF+ L+ F+
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDA 94
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
L L+++ +GL + H + R+LH D+KP N+L++ + K++DF
Sbjct: 95 SALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADF 147
Query: 472 GLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMTGEK 528
GLA+ + + T+ Y APE+ C+ + S D++S G + EM +
Sbjct: 148 GLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 21/180 (11%)
Query: 351 AIKVLNETKGNGEDFINEVASISR----TSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSL 405
A+K+L + +D + + SR T H +T L + F+ H R + E+ + G L
Sbjct: 39 AMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL 97
Query: 406 EKFIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
F H + + T ++ ++ I LEYLH + +++ DIK N++LD+D
Sbjct: 98 --FFHLSRERVFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDG 147
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG +M GT Y+APEV N + D + G++++EM
Sbjct: 148 HIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 203
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 21/180 (11%)
Query: 351 AIKVLNETKGNGEDFINEVASISR----TSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSL 405
A+K+L + +D + + SR T H +T L + F+ H R + E+ + G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL 92
Query: 406 EKFIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
F H + + T ++ ++ I LEYLH + +++ DIK N++LD+D
Sbjct: 93 --FFHLSRERVFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDG 142
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG +M GT Y+APEV N + D + G++++EM
Sbjct: 143 HIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 198
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 22/191 (11%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + E F+ E ++ + H +IV L+G E + +I E + G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 479
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + + L +LY A ++ L YL + R +H DI N+L+ + C K
Sbjct: 480 FLQVR---KFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 531
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM--- 524
+ DFGL++ E + + + I ++APE NF + SDV+ +G+ ++E+
Sbjct: 532 LGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILMH 588
Query: 525 -----TGEKNN 530
G KNN
Sbjct: 589 GVKPFQGVKNN 599
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 114
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 115 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 164
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 222
Query: 522 FEMTG 526
+++
Sbjct: 223 YQLVA 227
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 21/180 (11%)
Query: 351 AIKVLNETKGNGEDFINEVASISR----TSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSL 405
A+K+L + +D + + SR T H +T L + F+ H R + E+ + G L
Sbjct: 37 AMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL 95
Query: 406 EKFIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
F H + + T ++ ++ I LEYLH + +++ DIK N++LD+D
Sbjct: 96 --FFHLSRERVFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDG 145
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG +M GT Y+APEV N + D + G++++EM
Sbjct: 146 HIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 201
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 116
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 117 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 224
Query: 522 FEMTG 526
+++
Sbjct: 225 YQLVA 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 21/180 (11%)
Query: 351 AIKVLNETKGNGEDFINEVASISR----TSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSL 405
A+K+L + +D + + SR T H +T L + F+ H R + E+ + G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL 92
Query: 406 EKFIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
F H + + T ++ ++ I LEYLH + +++ DIK N++LD+D
Sbjct: 93 --FFHLSRERVFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDG 142
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG +M GT Y+APEV N + D + G++++EM
Sbjct: 143 HIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 198
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 61 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 119
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 120 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 169
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 170 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 227
Query: 522 FEMTG 526
+++
Sbjct: 228 YQLVA 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 114
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 115 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 164
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 222
Query: 522 FEMTG 526
+++
Sbjct: 223 YQLVA 227
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 114
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 115 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 164
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 222
Query: 522 FEMTG 526
+++
Sbjct: 223 YQLVA 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 40 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 98
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 99 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 148
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 149 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 206
Query: 522 FEMTG 526
+++
Sbjct: 207 YQLVA 211
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 24/183 (13%)
Query: 348 QNVAIKVLNE----TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
Q A+KV+++ K + E + EV + + H NI L F + L+ E + G
Sbjct: 52 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGG 111
Query: 404 SL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD- 461
L ++ I K E + +I + G+ Y H+ +I+H D+KP N+LL+
Sbjct: 112 ELFDEIISRKRFSEVDAA-------RIIRQVLSGITYXHK---NKIVHRDLKPENLLLES 161
Query: 462 --EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
+D +I DFGL+ E + GT YIAPEV + E K DV+S G+
Sbjct: 162 KSKDANIRIIDFGLSTHFEASKKXKDKI---GTAYYIAPEVLHGTYDE---KCDVWSTGV 215
Query: 520 MVF 522
+++
Sbjct: 216 ILY 218
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 21/180 (11%)
Query: 351 AIKVLNETKGNGEDFINEVASISR----TSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSL 405
A+K+L + +D + + SR T H +T L + F+ H R + E+ + G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL 92
Query: 406 EKFIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
F H + + T ++ ++ I LEYLH + +++ DIK N++LD+D
Sbjct: 93 --FFHLSRERVFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDG 142
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG +M GT Y+APEV N + D + G++++EM
Sbjct: 143 HIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 198
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 21/180 (11%)
Query: 351 AIKVLNETKGNGEDFINEVASISR----TSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSL 405
A+K+L + +D + + SR T H +T L + F+ H R + E+ + G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL 92
Query: 406 EKFIH-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
F H + + T ++ ++ I LEYLH + +++ DIK N++LD+D
Sbjct: 93 --FFHLSRERVFTEERARF-----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDG 142
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG +M GT Y+APEV N + D + G++++EM
Sbjct: 143 HIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 198
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 55 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 113
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 114 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 163
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 164 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 221
Query: 522 FEMTG 526
+++
Sbjct: 222 YQLVA 226
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 116
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 117 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 224
Query: 522 FEMTG 526
+++
Sbjct: 225 YQLVA 229
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 116
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 117 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 224
Query: 522 FEMTG 526
+++
Sbjct: 225 YQLVA 229
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 116
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 117 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 166
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 224
Query: 522 FEMTG 526
+++
Sbjct: 225 YQLVA 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 348 QNVAIKVLNE---TKGNGEDFIN-EVASISRTSHVNIVTLLGFCFEGHRRALI-YEFVSN 402
+ AIK+L + K N ++ E +SR H V L F F+ + + N
Sbjct: 59 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKN 117
Query: 403 GSLEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G L K+I + ET + I LEYLH I+H D+KP NILL+
Sbjct: 118 GELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH---GKGIIHRDLKPENILLN 167
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
ED +I+DFG AK+ GT Y++PE+ SD+++ G ++
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK--SACKSSDLWALGCII 225
Query: 522 FEMTG 526
+++
Sbjct: 226 YQLVA 230
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 107/263 (40%), Gaps = 57/263 (21%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 122 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 172
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
KI+DFG S+ + + R GT+ Y+ PE+ + K D++S G++
Sbjct: 173 LKIADFGW--------SVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE--KVDLWSLGVLC 222
Query: 522 FE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
+E + G E N R S E FP +V E AR +
Sbjct: 223 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARDL 262
Query: 575 ILVSLWCIQTNPSDRPSMNRVVE 597
I ++ NPS RP + V+E
Sbjct: 263 ISR---LLKHNPSQRPMLREVLE 282
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 101 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 151
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPE-VFCRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE + R E K D++S G++
Sbjct: 152 LKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEXIEGRXHDE---KVDLWSLGVL 200
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 240
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 241 LISR---LLKHNPSQRPXLREVLE 261
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 424 EVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESI 483
E L + +ARG+E+L + + +H D+ NILL E+ KI DFGLA+
Sbjct: 199 EDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 484 VSMTGARGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIY 542
V R + ++APE +F + + S KSDV+SYG++++E+ +
Sbjct: 256 VRKGDTRLPLKWMAPESIFDKIY---STKSDVWSYGVLLWEIFSLGGSP----------- 301
Query: 543 FPHWVYKRLELEEDLG---LQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVEML 599
Y ++++ED +G+ + ++ + L C +P +RP +VE L
Sbjct: 302 -----YPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 348 QNVAIKVLNE--TKGNGEDFINEVASISRTSH-VNIVTLLGFCF-EGHRRALIYEFVSNG 403
+ VA+K+L E T + + E+ ++ H +N+V LLG C +G +I E+ G
Sbjct: 58 RTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYG 117
Query: 404 SLEKFIHEKHPL 415
+L ++ K L
Sbjct: 118 NLSNYLKSKRDL 129
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 107/263 (40%), Gaps = 57/263 (21%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 122 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 172
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
KI+DFG S+ + + R GT+ Y+ PE+ + K D++S G++
Sbjct: 173 LKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE--KVDLWSLGVLC 222
Query: 522 FE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
+E + G E N R S E FP +V E AR +
Sbjct: 223 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARDL 262
Query: 575 ILVSLWCIQTNPSDRPSMNRVVE 597
I ++ NPS RP + V+E
Sbjct: 263 ISR---LLKHNPSQRPMLREVLE 282
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 97 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 147
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 148 LKIADFGW--------SVHAPSSRRDTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 196
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 236
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 237 LISR---LLKHNPSQRPMLREVLE 257
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 97 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 147
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 148 LKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 196
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 236
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 237 LISR---LLKHNPSQRPMLREVLE 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 107/263 (40%), Gaps = 57/263 (21%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 53 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 112
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 113 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 163
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
KI+DFG S+ + + R GT+ Y+ PE+ + K D++S G++
Sbjct: 164 LKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE--KVDLWSLGVLC 213
Query: 522 FE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
+E + G E N R S E FP +V E AR +
Sbjct: 214 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARDL 253
Query: 575 ILVSLWCIQTNPSDRPSMNRVVE 597
I ++ NPS RP + V+E
Sbjct: 254 ISR---LLKHNPSQRPMLREVLE 273
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 101 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 151
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 152 LKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 200
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 240
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 241 LISR---LLKHNPSQRPMLREVLE 261
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 22/191 (11%)
Query: 350 VAIKVLNETKGNG--EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK + E F+ E ++ + H +IV L+G E + +I E + G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 479
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
F+ + + + L +LY A ++ L YL + R +H DI N+L+ C K
Sbjct: 480 FLQVR---KFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVK 531
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM--- 524
+ DFGL++ E + + + I ++APE NF + SDV+ +G+ ++E+
Sbjct: 532 LGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCMWEILMH 588
Query: 525 -----TGEKNN 530
G KNN
Sbjct: 589 GVKPFQGVKNN 599
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 99 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 149
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 150 LKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 198
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 238
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 239 LISR---LLKHNPSQRPMLREVLE 259
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 93/226 (41%), Gaps = 43/226 (19%)
Query: 351 AIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALI-------------- 396
AIK + T+ ++EV ++ +H +V E RR +
Sbjct: 35 AIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE--RRNFVKPXTAVKKKSTLFI 92
Query: 397 -YEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKP 455
E+ N +L IH ++ L + W + +I L Y+H + I+H ++KP
Sbjct: 93 QXEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQIL----EALSYIH---SQGIIHRNLKP 144
Query: 456 HNILLDEDFCPKISDFGLAKICEGRESIV------------SMTGARGTIGYIAPEVFCR 503
NI +DE KI DFGLAK I+ ++T A GT Y+A EV
Sbjct: 145 XNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLD- 203
Query: 504 NFGEVSYKSDVYSYGMMVFEM-----TGEKNNANVAVDRSSEIYFP 544
G + K D YS G++ FE TG + + RS I FP
Sbjct: 204 GTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVSIEFP 249
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 99 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 149
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 150 LKIADFGW--------SVHAPSSRRAALCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 198
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 238
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 239 LISR---LLKHNPSQRPMLREVLE 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 97
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 98 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 148
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 149 LKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 197
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 198 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 237
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 238 LISR---LLKHNPSQRPMLREVLE 258
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI--HEKHPLETNQK 420
+DFI EV ++ H N++ L G + ++ E GSL + H+ H L
Sbjct: 66 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT-- 122
Query: 421 LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGR 480
L + AV +A G+ YL + R +H D+ N+LL KI DFGL +
Sbjct: 123 -----LSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174
Query: 481 ESIVSMTGARGT-IGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRS 538
+ M R + APE R F S+ SD + +G+ ++EM + ++ S
Sbjct: 175 DDHXVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGS 231
Query: 539 SEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPS 591
++ +RL ED Q I N ++V W P DRP+
Sbjct: 232 QILHKIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 271
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 107/263 (40%), Gaps = 57/263 (21%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 101 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 151
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
KI+DFG S+ + + R GT+ Y+ PE+ + K D++S G++
Sbjct: 152 LKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE--KVDLWSLGVLC 201
Query: 522 FE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
+E + G E N R S E FP +V E AR +
Sbjct: 202 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARDL 241
Query: 575 ILVSLWCIQTNPSDRPSMNRVVE 597
I ++ NPS RP + V+E
Sbjct: 242 ISR---LLKHNPSQRPMLREVLE 261
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 29/257 (11%)
Query: 351 AIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFE--GHRRALIYEFVSNGSLEKF 408
+KV + + DF E + SH N++ +LG C LI ++ GSL
Sbjct: 40 VLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNV 99
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 468
+HE TN + K A+ +ARG+ +LH I + ++++DED +I
Sbjct: 100 LHEG----TNFVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARI 154
Query: 469 SDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS-DVYSYGMMVFEMTGE 527
S +A + +S G ++APE + + + +S D++S+ ++++E+
Sbjct: 155 S---MADVKFSFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV-- 205
Query: 528 KNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPS 587
+ E+ F +E+ + L+G+ + + + C+ +P+
Sbjct: 206 ----------TREVPFAD--LSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPA 253
Query: 588 DRPSMNRVVEMLEGSLD 604
RP + +V +LE D
Sbjct: 254 KRPKFDMIVPILEKMQD 270
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 96 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 146
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 147 LKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 195
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 235
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 236 LISR---LLKHNPSQRPMLREVLE 256
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 107/263 (40%), Gaps = 57/263 (21%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 96 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 146
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMV 521
KI+DFG S+ + + R GT+ Y+ PE+ + K D++S G++
Sbjct: 147 LKIADFGW--------SVHAPSSRRTELCGTLDYLPPEMIEGRMHDE--KVDLWSLGVLC 196
Query: 522 FE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 574
+E + G E N R S E FP +V E AR +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARDL 236
Query: 575 ILVSLWCIQTNPSDRPSMNRVVE 597
I ++ NPS RP + V+E
Sbjct: 237 ISR---LLKHNPSQRPMLREVLE 256
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 96 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 146
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 147 LKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 195
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 235
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 236 LISR---LLKHNPSQRPMLREVLE 256
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI--HEKHPLETNQK 420
+DFI EV ++ H N++ L G + ++ E GSL + H+ H L
Sbjct: 60 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT-- 116
Query: 421 LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGR 480
L + AV +A G+ YL + R +H D+ N+LL KI DFGL +
Sbjct: 117 -----LSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 168
Query: 481 ESIVSMTGARGT-IGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRS 538
+ M R + APE R F S+ SD + +G+ ++EM + ++ S
Sbjct: 169 DDHYVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGS 225
Query: 539 SEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPS 591
++ +RL ED Q I N ++V W P DRP+
Sbjct: 226 QILHKIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 265
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI--HEKHPLETNQK 420
+DFI EV ++ H N++ L G + ++ E GSL + H+ H L
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT-- 112
Query: 421 LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGR 480
L + AV +A G+ YL + R +H D+ N+LL KI DFGL +
Sbjct: 113 -----LSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
Query: 481 ESIVSMTGARGT-IGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRS 538
+ M R + APE R F S+ SD + +G+ ++EM + ++ S
Sbjct: 165 DDHXVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
Query: 539 SEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPS 591
++ +RL ED Q I N ++V W P DRP+
Sbjct: 222 QILHKIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 261
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI--HEKHPLETNQK 420
+DFI EV ++ H N++ L G + ++ E GSL + H+ H L
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT-- 112
Query: 421 LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGR 480
L + AV +A G+ YL + R +H D+ N+LL KI DFGL +
Sbjct: 113 -----LSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
Query: 481 ESIVSMTGARGT-IGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRS 538
+ M R + APE R F S+ SD + +G+ ++EM + ++ S
Sbjct: 165 DDHYVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
Query: 539 SEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPS 591
++ +RL ED Q I N ++V W P DRP+
Sbjct: 222 QILHKIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 96 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 146
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 147 LKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 195
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 235
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 236 LISR---LLKHNPSQRPMLREVLE 256
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 96 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 146
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 147 LKIADFGW--------SVHAPSSRRAALCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 195
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 235
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 236 LISR---LLKHNPSQRPMLREVLE 256
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI--HEKHPLETNQK 420
+DFI EV ++ H N++ L G + ++ E GSL + H+ H L
Sbjct: 66 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT-- 122
Query: 421 LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGR 480
L + AV +A G+ YL + R +H D+ N+LL KI DFGL +
Sbjct: 123 -----LSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174
Query: 481 ESIVSMTGARGT-IGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRS 538
+ M R + APE R F S+ SD + +G+ ++EM + ++ S
Sbjct: 175 DDHYVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGS 231
Query: 539 SEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPS 591
++ +RL ED Q I N ++V W P DRP+
Sbjct: 232 QILHKIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 271
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Query: 351 AIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIH 410
A+KVL +T + + E+ + R SH NI+ L +L+ E V+ G L I
Sbjct: 82 ALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIV 140
Query: 411 EKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPK 467
EK +++ + + +I +A YLH I+H D+KP N+L D K
Sbjct: 141 EKG--YYSERDAADAVKQILEAVA----YLHENG---IVHRDLKPENLLYATPAPDAPLK 191
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF--CRNFGEVSYKSDVYSYGMMVF 522
I+DFGL+KI E + V M GT GY APE+ C EV D++S G++ +
Sbjct: 192 IADFGLSKIVEHQ---VLMKTVCGTPGYCAPEILRGCAYGPEV----DMWSVGIITY 241
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 99 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 149
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 150 LKIADFGW--------SVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 198
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 238
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 239 LISR---LLKHNPSQRPMLREVLE 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 99 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 149
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 150 LKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 198
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 238
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 239 LISR---LLKHNPSQRPMLREVLE 259
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI--HEKHPLETNQK 420
+DFI EV ++ H N++ L G + ++ E GSL + H+ H L
Sbjct: 60 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT-- 116
Query: 421 LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGR 480
L + AV +A G+ YL + R +H D+ N+LL KI DFGL +
Sbjct: 117 -----LSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 168
Query: 481 ESIVSMTGARGT-IGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRS 538
+ M R + APE R F S+ SD + +G+ ++EM + ++ S
Sbjct: 169 DDHYVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGS 225
Query: 539 SEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPS 591
++ +RL ED Q I N ++V W P DRP+
Sbjct: 226 QILHKIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 265
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 96 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 146
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 147 LKIADFGW--------SVHAPSSRRTXLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 195
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 235
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 236 LISR---LLKHNPSQRPMLREVLE 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 99 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 149
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 150 LKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 198
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 238
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 239 LISR---LLKHNPSQRPMLREVLE 259
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFI--HEKHPLETNQK 420
+DFI EV ++ H N++ L G + ++ E GSL + H+ H L
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT-- 112
Query: 421 LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGR 480
L + AV +A G+ YL + R +H D+ N+LL KI DFGL +
Sbjct: 113 -----LSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
Query: 481 ESIVSMTGARGT-IGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRS 538
+ M R + APE R F S+ SD + +G+ ++EM + ++ S
Sbjct: 165 DDHYVMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
Query: 539 SEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPS 591
++ +RL ED Q I N ++V W P DRP+
Sbjct: 222 QILHKIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 261
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 45/254 (17%)
Query: 371 SISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKI 429
SI R+ +H ++V GF + ++ E SL + +H++ T + ++ +
Sbjct: 91 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-- 147
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE---GRESIVSM 486
I G +YLHR R++H D+K N+ L+ED KI DFGLA E R+ ++
Sbjct: 148 ---IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC- 200
Query: 487 TGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHW 546
GT YIAPEV + G S++ DV+S G +++ + K + + +
Sbjct: 201 ----GTPNYIAPEVLSKK-GH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET------- 247
Query: 547 VYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVE---MLEGSL 603
Y R++ E + I N +KM +QT+P+ RP++N ++ G +
Sbjct: 248 -YLRIKKNEYSIPKHI-NPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYI 298
Query: 604 DS------LQIPPR 611
+ L IPPR
Sbjct: 299 PARLPITCLTIPPR 312
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 35 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 94
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 95 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 145
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 146 LKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 194
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 195 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 234
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 235 LISR---LLKHNPSQRPMLREVLE 255
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 49/256 (19%)
Query: 371 SISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKI 429
SI R+ +H ++V GF + ++ E SL + +H++ T + ++ +
Sbjct: 73 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-- 129
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
I G +YLHR R++H D+K N+ L+ED KI DFGLA + V G
Sbjct: 130 ---IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGE 176
Query: 490 R-----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFP 544
R GT YIAPEV + G S++ DV+S G +++ + K + + +
Sbjct: 177 RKKTLCGTPNYIAPEVLSKK-GH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET----- 229
Query: 545 HWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVE---MLEG 601
Y R++ E + I N +KM +QT+P+ RP++N ++ G
Sbjct: 230 ---YLRIKKNEYSIPKHI-NPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSG 278
Query: 602 SLDS------LQIPPR 611
+ + L IPPR
Sbjct: 279 YIPARLPITCLTIPPR 294
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 40 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 100 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 150
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 151 LKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 199
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 200 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 239
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 240 LISR---LLKHNPSQRPMLREVLE 260
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 45/254 (17%)
Query: 371 SISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKI 429
SI R+ +H ++V GF + ++ E SL + +H++ T + ++ +
Sbjct: 67 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR--- 122
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE---GRESIVSM 486
I G +YLHR R++H D+K N+ L+ED KI DFGLA E R+ ++
Sbjct: 123 --QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC- 176
Query: 487 TGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHW 546
GT YIAPEV + G S++ DV+S G +++ + K + + +
Sbjct: 177 ----GTPNYIAPEVLSKK-GH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET------- 223
Query: 547 VYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVE---MLEGSL 603
Y R++ E + I N +KM +QT+P+ RP++N ++ G +
Sbjct: 224 -YLRIKKNEYSIPKHI-NPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYI 274
Query: 604 DS------LQIPPR 611
+ L IPPR
Sbjct: 275 PARLPITCLTIPPR 288
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 49/256 (19%)
Query: 371 SISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKI 429
SI R+ +H ++V GF + ++ E SL + +H++ T + ++ +
Sbjct: 69 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-- 125
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
I G +YLHR R++H D+K N+ L+ED KI DFGLA + V G
Sbjct: 126 ---IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGE 172
Query: 490 R-----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFP 544
R GT YIAPEV + G S++ DV+S G +++ + K + + +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKK-GH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET----- 225
Query: 545 HWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVE---MLEG 601
Y R++ E + I N +KM +QT+P+ RP++N ++ G
Sbjct: 226 ---YLRIKKNEYSIPKHI-NPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSG 274
Query: 602 SLDS------LQIPPR 611
+ + L IPPR
Sbjct: 275 YIPARLPITCLTIPPR 290
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 96 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 146
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 147 LKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 195
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 235
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 236 LISR---LLKHNPSQRPMLREVLE 256
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 45/254 (17%)
Query: 371 SISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKI 429
SI R+ +H ++V GF + ++ E SL + +H++ T + ++ +
Sbjct: 93 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-- 149
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE---GRESIVSM 486
I G +YLHR R++H D+K N+ L+ED KI DFGLA E R+ ++
Sbjct: 150 ---IVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC- 202
Query: 487 TGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHW 546
GT YIAPEV + S++ DV+S G +++ + K + + +
Sbjct: 203 ----GTPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET------- 249
Query: 547 VYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVE---MLEGSL 603
Y R++ E + I N +KM +QT+P+ RP++N ++ G +
Sbjct: 250 -YLRIKKNEYSIPKHI-NPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYI 300
Query: 604 DS------LQIPPR 611
+ L IPPR
Sbjct: 301 PARLPITCLTIPPR 314
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 33 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 92
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 93 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 143
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 144 LKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 192
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 193 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 232
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 233 LISR---LLKHNPSQRPMLREVLE 253
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 40/232 (17%)
Query: 371 SISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKI 429
SI R+ +H ++V GF + ++ E SL + +H++ T + ++ +
Sbjct: 69 SIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-- 125
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
I G +YLHR R++H D+K N+ L+ED KI DFGLA + V G
Sbjct: 126 ---IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGE 172
Query: 490 R-----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFP 544
R GT YIAPEV + G S++ DV+S G +++ + K + + +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKK-GH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET----- 225
Query: 545 HWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVV 596
Y R++ E + I N +KM +QT+P+ RP++N ++
Sbjct: 226 ---YLRIKKNEYSIPKHI-NPVAASLIQKM-------LQTDPTARPTINELL 266
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 30/190 (15%)
Query: 348 QNVAIKVLNETK---GNGED------FINEVASISRTSHVNIVTLLGFCFEGHRRALIYE 398
+ VAIK++++ K G+ + E+ + + +H I+ + F F+ ++ E
Sbjct: 36 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLE 94
Query: 399 FVSNGSL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 457
+ G L +K + K E KL + Y++ + + +YLH I+H D+KP N
Sbjct: 95 LMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV----QYLH---ENGIIHRDLKPEN 144
Query: 458 ILL---DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS-- 512
+LL +ED KI+DFG +KI G S+ M GT Y+APEV + G Y
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV-SVGTAGYNRAV 200
Query: 513 DVYSYGMMVF 522
D +S G+++F
Sbjct: 201 DCWSLGVILF 210
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 30/190 (15%)
Query: 348 QNVAIKVLNETK---GNGED------FINEVASISRTSHVNIVTLLGFCFEGHRRALIYE 398
+ VAIK++++ K G+ + E+ + + +H I+ + F F+ ++ E
Sbjct: 36 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLE 94
Query: 399 FVSNGSL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 457
+ G L +K + K E KL + Y++ + + +YLH I+H D+KP N
Sbjct: 95 LMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV----QYLH---ENGIIHRDLKPEN 144
Query: 458 ILL---DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS-- 512
+LL +ED KI+DFG +KI G S+ M GT Y+APEV + G Y
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV-SVGTAGYNRAV 200
Query: 513 DVYSYGMMVF 522
D +S G+++F
Sbjct: 201 DCWSLGVILF 210
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
E E+A + ++V GF + ++ E SL + +H++ T + +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR 145
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + I +G++YLH N R++H D+K N+ L++D KI DFGLA +
Sbjct: 146 YFMRQTI-----QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------T 190
Query: 483 IVSMTGAR-----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+ G R GT YIAPEV C+ G S++ D++S G +++ +
Sbjct: 191 KIEFDGERKKXLCGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTL 235
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
E E+A + ++V GF + ++ E SL + +H++ T + +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR 145
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + I +G++YLH N R++H D+K N+ L++D KI DFGLA +
Sbjct: 146 YFMRQTI-----QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------T 190
Query: 483 IVSMTGAR-----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+ G R GT YIAPEV C+ G S++ D++S G +++ +
Sbjct: 191 KIEFDGERKKDLCGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTL 235
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 30/190 (15%)
Query: 348 QNVAIKVLNETK---GNGED------FINEVASISRTSHVNIVTLLGFCFEGHRRALIYE 398
+ VAIK++++ K G+ + E+ + + +H I+ + F F+ ++ E
Sbjct: 36 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLE 94
Query: 399 FVSNGSL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 457
+ G L +K + K E KL Y++ + + +YLH I+H D+KP N
Sbjct: 95 LMEGGELFDKVVGNKRLKEATCKL---YFYQMLLAV----QYLH---ENGIIHRDLKPEN 144
Query: 458 ILL---DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS-- 512
+LL +ED KI+DFG +KI G S+ M GT Y+APEV + G Y
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV-SVGTAGYNRAV 200
Query: 513 DVYSYGMMVF 522
D +S G+++F
Sbjct: 201 DCWSLGVILF 210
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 17/95 (17%)
Query: 435 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGAR---- 490
+G++YLH N R++H D+K N+ L++D KI DFGLA + + G R
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKTL 202
Query: 491 -GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
GT YIAPEV C+ G S++ D++S G +++ +
Sbjct: 203 CGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTL 235
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 179
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 180 -RHTADEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 223
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 28/196 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIY-EFVS-- 401
Q VAIK + + N + + E+ + H NI+ + R + Y EF S
Sbjct: 81 QQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDIL----RPTVPYGEFKSVY 136
Query: 402 ------NGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKP 455
L + IH PL T + +++ LY++ RGL+Y+H + +++H D+KP
Sbjct: 137 VVLDLMESDLHQIIHSSQPL-TLEHVRY-FLYQLL----RGLKYMH---SAQVIHRDLKP 187
Query: 456 HNILLDEDFCPKISDFGLAK-ICEG-RESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSD 513
N+L++E+ KI DFG+A+ +C E MT T Y APE+ + E + D
Sbjct: 188 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML-SLHEYTQAID 246
Query: 514 VYSYGMMVFEMTGEKN 529
++S G + EM +
Sbjct: 247 LWSVGCIFGEMLARRQ 262
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 24/198 (12%)
Query: 351 AIKVLNETKGNGEDFINEVASISR-TSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKF 408
A+KV++++K D E+ + R H NI+TL +G L+ E + G L +K
Sbjct: 56 AVKVIDKSK---RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI 112
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL-LDEDF--- 464
+ +K E VL+ I + +EYLH + ++H D+KP NIL +DE
Sbjct: 113 LRQKFFSEREASF---VLHTIG----KTVEYLH---SQGVVHRDLKPSNILYVDESGNPE 162
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
C +I DFG AK ++ MT T ++APEV R + D++S G++++ M
Sbjct: 163 CLRICDFGFAKQLRAENGLL-MTPCY-TANFVAPEVLKRQGYDEG--CDIWSLGILLYTM 218
Query: 525 -TGEKNNANVAVDRSSEI 541
G AN D EI
Sbjct: 219 LAGYTPFANGPSDTPEEI 236
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 381 VTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYL 440
VT G F + E + + SL+KF K ++ Q + ++L KIAV I + LE+L
Sbjct: 69 VTFYGALFREGDVWICMELM-DTSLDKFY--KQVIDKGQTIPEDILGKIAVSIVKALEHL 125
Query: 441 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEV 500
H + ++H D+KP N+L++ K+ DFG++ V+ G Y+APE
Sbjct: 126 HSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAPER 180
Query: 501 FCRNFGEVSY--KSDVYSYGMMVFEMT 525
+ Y KSD++S G+ + E+
Sbjct: 181 INPELNQKGYSVKSDIWSLGITMIELA 207
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 363 EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLK 422
E E+A + ++V GF + ++ E SL + +H++ T + +
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR 129
Query: 423 WEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRES 482
+ + I +G++YLH N R++H D+K N+ L++D KI DFGLA +
Sbjct: 130 YFMRQTI-----QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------T 174
Query: 483 IVSMTGAR-----GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+ G R GT YIAPEV C+ G S++ D++S G +++ +
Sbjct: 175 KIEFDGERKKDLCGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTL 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPL-ETNQKLKWEV 425
NE+A + + H NIVTL L+ + VS G L I E+ E + L
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---- 110
Query: 426 LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL---DEDFCPKISDFGLAKICEGRES 482
+ + ++YLH I+H D+KP N+L +E+ I+DFGL+K+ E
Sbjct: 111 ---VIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQ 160
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
M+ A GT GY+APEV + S D +S G++ +
Sbjct: 161 NGIMSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVITY 198
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA---- 177
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 178 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA---- 177
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 178 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 30/190 (15%)
Query: 348 QNVAIKVLNETK---GNGED------FINEVASISRTSHVNIVTLLGFCFEGHRRALIYE 398
+ VAIK++++ K G+ + E+ + + +H I+ + F F+ ++ E
Sbjct: 35 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLE 93
Query: 399 FVSNGSL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 457
+ G L +K + K E KL + Y++ + + +YLH I+H D+KP N
Sbjct: 94 LMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV----QYLH---ENGIIHRDLKPEN 143
Query: 458 ILL---DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS-- 512
+LL +ED KI+DFG +KI G S+ M GT Y+APEV + G Y
Sbjct: 144 VLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV-SVGTAGYNRAV 199
Query: 513 DVYSYGMMVF 522
D +S G+++F
Sbjct: 200 DCWSLGVILF 209
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 179
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 180 -RHTADEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 223
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 179
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 180 -RHTADEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA---- 183
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 184 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 227
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 24/198 (12%)
Query: 351 AIKVLNETKGNGEDFINEVASISR-TSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKF 408
A+KV++++K D E+ + R H NI+TL +G L+ E + G L +K
Sbjct: 56 AVKVIDKSK---RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI 112
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL-LDEDF--- 464
+ +K E VL+ I + +EYLH + ++H D+KP NIL +DE
Sbjct: 113 LRQKFFSEREASF---VLHTIG----KTVEYLH---SQGVVHRDLKPSNILYVDESGNPE 162
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
C +I DFG AK ++ MT T ++APEV R + D++S G++++ M
Sbjct: 163 CLRICDFGFAKQLRAENGLL-MTPCY-TANFVAPEVLKRQGYDEG--CDIWSLGILLYTM 218
Query: 525 -TGEKNNANVAVDRSSEI 541
G AN D EI
Sbjct: 219 LAGYTPFANGPSDTPEEI 236
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 436 GLEYLHRGCNTRILHFDIKPHNILLDE-----DFCPKISDFGL-AKICEGRESIVSMTGA 489
GL +LH + I+H D+KPHNIL+ ISDFGL K+ GR S +G
Sbjct: 130 GLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 490 RGTIGYIAPEVFCRNFGE-VSYKSDVYSYGMMVFEMTGEKNNA-NVAVDRSSEIYFPHWV 547
GT G+IAPE+ + E +Y D++S G + + + E ++ ++ R + I
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACS 246
Query: 548 YKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNPSDRPSMNRVVE 597
L E+ E+ +E KMI + +P RPS V++
Sbjct: 247 LDCLHPEKH------EDVIARELIEKMIAM-------DPQKRPSAKHVLK 283
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 30/190 (15%)
Query: 348 QNVAIKVLNETK---GNGED------FINEVASISRTSHVNIVTLLGFCFEGHRRALIYE 398
+ VAIK++++ K G+ + E+ + + +H I+ + F F+ ++ E
Sbjct: 42 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLE 100
Query: 399 FVSNGSL-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 457
+ G L +K + K E KL + Y++ + + +YLH I+H D+KP N
Sbjct: 101 LMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV----QYLH---ENGIIHRDLKPEN 150
Query: 458 ILL---DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS-- 512
+LL +ED KI+DFG +KI G S+ M GT Y+APEV + G Y
Sbjct: 151 VLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV-SVGTAGYNRAV 206
Query: 513 DVYSYGMMVF 522
D +S G+++F
Sbjct: 207 DCWSLGVILF 216
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 28/196 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIY-EFVS-- 401
Q VAIK + + N + + E+ + H NI+ + R + Y EF S
Sbjct: 80 QQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDIL----RPTVPYGEFKSVY 135
Query: 402 ------NGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKP 455
L + IH PL T + +++ LY++ RGL+Y+H + +++H D+KP
Sbjct: 136 VVLDLMESDLHQIIHSSQPL-TLEHVRY-FLYQLL----RGLKYMH---SAQVIHRDLKP 186
Query: 456 HNILLDEDFCPKISDFGLAK-ICEG-RESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSD 513
N+L++E+ KI DFG+A+ +C E MT T Y APE+ + E + D
Sbjct: 187 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML-SLHEYTQAID 245
Query: 514 VYSYGMMVFEMTGEKN 529
++S G + EM +
Sbjct: 246 LWSVGCIFGEMLARRQ 261
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 365 FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
I E+ + + IV G + ++ E + GSL++ L+ ++ +
Sbjct: 113 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV------LKKAGRIPEQ 166
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIV 484
+L K+++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 167 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-----QLID 219
Query: 485 SMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
SM + GT Y++PE S +SD++S G+ + EM
Sbjct: 220 SMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMA 259
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGXVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 358 TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRAL--IYEFVSNGSLEKFIHEKHPL 415
T+ + ++EV + H NIV + L + E+ G L I +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG--T 102
Query: 416 ETNQKLKWEVLYKIAVGIARGLEYLHR---GCNTRILHFDIKPHNILLDEDFCPKISDFG 472
+ Q L E + ++ + L+ HR G +T +LH D+KP N+ LD K+ DFG
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFG 161
Query: 473 LAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSY--KSDVYSYGMMVFEM 524
LA+I S GT Y++PE R +SY KSD++S G +++E+
Sbjct: 162 LARILNHDTSFAK--AFVGTPYYMSPEQMNR----MSYNEKSDIWSLGCLLYEL 209
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVL 426
E+ +S+ I G + + +I E++ GS + + PLE +
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL-KPGPLEET------YI 118
Query: 427 YKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSM 486
I I +GL+YLH + R +H DIK N+LL E K++DFG+A + ++ +
Sbjct: 119 ATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKR 173
Query: 487 TGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT-GEKNNANV 533
GT ++APEV ++ +K+D++S G+ E+ GE N+++
Sbjct: 174 NXFVGTPFWMAPEVIKQS--AYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA---- 178
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 179 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA---- 174
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 175 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 218
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 97
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 98 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 148
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI++FG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 149 LKIANFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 197
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 198 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 237
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 238 LISR---LLKHNPSQRPMLREVLE 258
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 358 TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRAL--IYEFVSNGSLEKFIHEKHPL 415
T+ + ++EV + H NIV + L + E+ G L I +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG--T 102
Query: 416 ETNQKLKWEVLYKIAVGIARGLEYLHR---GCNTRILHFDIKPHNILLDEDFCPKISDFG 472
+ Q L E + ++ + L+ HR G +T +LH D+KP N+ LD K+ DFG
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFG 161
Query: 473 LAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSY--KSDVYSYGMMVFEM 524
LA+I E GT Y++PE R +SY KSD++S G +++E+
Sbjct: 162 LARILNHDEDFAK--EFVGTPYYMSPEQMNR----MSYNEKSDIWSLGCLLYEL 209
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 177
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 178 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 221
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 119 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 171
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 172 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 215
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 149 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 201
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 202 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNMTVDIWSVGCIMAEL 245
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 130 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 182
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 183 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 179
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 180 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 174
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 175 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 184
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 185 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 228
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 365 FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
I E+ + + IV G + ++ E + GSL++ L+ ++ +
Sbjct: 78 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV------LKKAGRIPEQ 131
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIV 484
+L K+++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 132 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-----QLID 184
Query: 485 SMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
SM + GT Y++PE S +SD++S G+ + EM
Sbjct: 185 SMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMA 224
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 184
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 185 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 228
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 184
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 185 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 228
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 24/198 (12%)
Query: 351 AIKVLNETKGNGEDFINEVASISR-TSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKF 408
A+K+++++K D E+ + R H NI+TL +G ++ E + G L +K
Sbjct: 51 AVKIIDKSK---RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKI 107
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL-LDEDFCP- 466
+ +K E VL+ I + +EYLH ++H D+KP NIL +DE P
Sbjct: 108 LRQKFFSEREAS---AVLFTIT----KTVEYLH---AQGVVHRDLKPSNILYVDESGNPE 157
Query: 467 --KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+I DFG AK ++ MT T ++APEV R + + D++S G++++ M
Sbjct: 158 SIRICDFGFAKQLRAENGLL-MTPCY-TANFVAPEVLERQGYDAA--CDIWSLGVLLYTM 213
Query: 525 -TGEKNNANVAVDRSSEI 541
TG AN D EI
Sbjct: 214 LTGYTPFANGPDDTPEEI 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 174
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 175 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 174
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 175 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 178
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 179 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 178
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 179 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 177
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 178 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 183
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 184 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 227
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I GLE++H N +++ D+KP NILLDE +ISD GLA ++ S+
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 490 RGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
GT GY+APEV + V+Y S D +S G M+F++
Sbjct: 352 -GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKL 384
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 21/162 (12%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKFIHEKHPLETNQKLKWEV 425
E+ + + +H I+ + F F+ ++ E + G L +K + K E KL
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---Y 258
Query: 426 LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL---DEDFCPKISDFGLAKICEGRES 482
Y++ + + +YLH I+H D+KP N+LL +ED KI+DFG +KI G S
Sbjct: 259 FYQMLLAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETS 310
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 522
+ M GT Y+APEV + G Y D +S G+++F
Sbjct: 311 L--MRTLCGTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 349
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 25/187 (13%)
Query: 348 QNVAIKVL---NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
+ VAIK + +E +G I EV+ + H NI+ L HR LI+E+ N
Sbjct: 60 ETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-D 118
Query: 405 LEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL---D 461
L+K+ ++ N + V+ + G+ + H + R LH D+KP N+LL D
Sbjct: 119 LKKY------MDKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSD 169
Query: 462 EDFCP--KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
P KI DFGLA+ I T T+ Y PE+ G Y + D++S
Sbjct: 170 ASETPVLKIGDFGLARAFG--IPIRQFTHEIITLWYRPPEIL---LGSRHYSTSVDIWSI 224
Query: 518 GMMVFEM 524
+ EM
Sbjct: 225 ACIWAEM 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 178
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 179 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I GLE++H N +++ D+KP NILLDE +ISD GLA ++ S+
Sbjct: 297 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 490 RGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
GT GY+APEV + V+Y S D +S G M+F++
Sbjct: 351 -GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKL 383
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 118 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 170
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 171 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 214
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTV 95
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + +++H DIKP N+LL
Sbjct: 96 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKKVIHRDIKPENLLLGSAGE 146
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 147 LKIADFGW--------SVHAPSSRRAALCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 195
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 196 CYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFV--------------------TEGARD 235
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 236 LISR---LLKHNPSQRPMLREVLE 256
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I GLE++H N +++ D+KP NILLDE +ISD GLA ++ S+
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 490 RGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
GT GY+APEV + V+Y S D +S G M+F++
Sbjct: 352 -GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKL 384
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I GLE++H N +++ D+KP NILLDE +ISD GLA ++ S+
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 490 RGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
GT GY+APEV + V+Y S D +S G M+F++
Sbjct: 352 -GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKL 384
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 358 TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRAL--IYEFVSNGSLEKFIHEKHPL 415
T+ + ++EV + H NIV + L + E+ G L I +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG--T 102
Query: 416 ETNQKLKWEVLYKIAVGIARGLEYLHR---GCNTRILHFDIKPHNILLDEDFCPKISDFG 472
+ Q L E + ++ + L+ HR G +T +LH D+KP N+ LD K+ DFG
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFG 161
Query: 473 LAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSY--KSDVYSYGMMVFEM 524
LA+I S GT Y++PE R +SY KSD++S G +++E+
Sbjct: 162 LARILNHDTSFAKT--FVGTPYYMSPEQMNR----MSYNEKSDIWSLGCLLYEL 209
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 365 FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
I E+ + + IV G + ++ E + GSL++ L+ ++ +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV------LKKAGRIPEQ 104
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIV 484
+L K+++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 105 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-----QLID 157
Query: 485 SMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
SM + GT Y++PE S +SD++S G+ + EM
Sbjct: 158 SMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMA 197
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 192
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 193 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 236
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 191
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 192 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 235
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 169
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 170 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 213
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 191
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 192 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 235
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 21/162 (12%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKFIHEKHPLETNQKLKWEV 425
E+ + + +H I+ + F F+ ++ E + G L +K + K E KL
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---Y 244
Query: 426 LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL---DEDFCPKISDFGLAKICEGRES 482
Y++ + + +YLH I+H D+KP N+LL +ED KI+DFG +KI G S
Sbjct: 245 FYQMLLAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETS 296
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 522
+ M GT Y+APEV + G Y D +S G+++F
Sbjct: 297 L--MRTLCGTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 335
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 192
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 193 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 236
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 168
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 169 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 212
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 365 FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
I E+ + + IV G + ++ E + GSL++ L+ ++ +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV------LKKAGRIPEQ 104
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIV 484
+L K+++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 105 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-----QLID 157
Query: 485 SMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
SM + GT Y++PE S +SD++S G+ + EM
Sbjct: 158 SMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMA 197
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 169
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 170 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 213
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 195
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 196 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 239
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 168
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 169 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 212
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 351 AIKVLNETKGNGEDFINEVASISRT---SHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLE 406
A+K+L + +D + + +R S +T L + F+ H R + E+ + G L
Sbjct: 39 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL- 97
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F H L + + I L+YLH N +++ D+K N++LD+D
Sbjct: 98 -FFH----LSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHI 150
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG + +M GT Y+APEV N + D + G++++EM
Sbjct: 151 KITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 204
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 365 FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
I E+ + + IV G + ++ E + GSL++ L+ ++ +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV------LKKAGRIPEQ 104
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIV 484
+L K+++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 105 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-----QLID 157
Query: 485 SMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
SM + GT Y++PE S +SD++S G+ + EM
Sbjct: 158 SMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMA 197
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 365 FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
I E+ + + IV G + ++ E + GSL++ L+ ++ +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV------LKKAGRIPEQ 104
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIV 484
+L K+++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 105 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-----QLID 157
Query: 485 SMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
SM + GT Y++PE S +SD++S G+ + EM
Sbjct: 158 SMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMA 197
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 365 FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
I E+ + + IV G + ++ E + GSL++ L+ ++ +
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV------LKKAGRIPEQ 104
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIV 484
+L K+++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 105 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-----QLID 157
Query: 485 SMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
SM + GT Y++PE S +SD++S G+ + EM
Sbjct: 158 SMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMA 197
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 351 AIKVLNETKGNGEDFINEVASISRT---SHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLE 406
A+K+L + +D + + +R S +T L + F+ H R + E+ + G L
Sbjct: 177 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL- 235
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F H L + + I L+YLH N +++ D+K N++LD+D
Sbjct: 236 -FFH----LSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHI 288
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG + +M GT Y+APEV N + D + G++++EM
Sbjct: 289 KITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 342
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 350 VAIKVLNETK----GNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL +T+ G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ + + + + + +A L Y H + R++H DIKP N+LL +
Sbjct: 100 YRELQKLSRFDEQRTATY------ITELANALSYCH---SKRVIHRDIKPENLLLGSNGE 150
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 151 LKIADFGW--------SVHAPSSRRDTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 199
Query: 521 VFE 523
+E
Sbjct: 200 CYE 202
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 108/264 (40%), Gaps = 59/264 (22%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ L+ K + +A L Y H + R++H DIKP N+LL
Sbjct: 99 YR------ELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGE 149
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI++FG S+ + + R GT+ Y+ PE+ R E K D++S G++
Sbjct: 150 LKIANFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVL 198
Query: 521 VFE-MTG----EKNNANVAVDRSS--EIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 573
+E + G E N R S E FP +V E AR
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------------------TEGARD 238
Query: 574 MILVSLWCIQTNPSDRPSMNRVVE 597
+I ++ NPS RP + V+E
Sbjct: 239 LISR---LLKHNPSQRPMLREVLE 259
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 351 AIKVLNETKGNGEDFINEVASISRT---SHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLE 406
A+K+L + +D + + +R S +T L + F+ H R + E+ + G L
Sbjct: 38 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL- 96
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F H L + + I L+YLH N +++ D+K N++LD+D
Sbjct: 97 -FFH----LSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHI 149
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG + +M GT Y+APEV N + D + G++++EM
Sbjct: 150 KITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 203
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 351 AIKVLNETKGNGEDFINEVASISRT---SHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLE 406
A+K+L + +D + + +R S +T L + F+ H R + E+ + G L
Sbjct: 180 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL- 238
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F H L + + I L+YLH N +++ D+K N++LD+D
Sbjct: 239 -FFH----LSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHI 291
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG + +M GT Y+APEV N + D + G++++EM
Sbjct: 292 KITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 345
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 433 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGT 492
I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA R + MTG T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVAT 181
Query: 493 IGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
Y APE+ N+ + D++S G ++ E+
Sbjct: 182 RWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 212
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
H +I+TL+ L+++ + G L ++ EK L + I +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKET------RSIMRSLLEA 212
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
+ +LH I+H D+KP NILLD++ ++SDFG + E E + + GT GY+
Sbjct: 213 VSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC---GTPGYL 266
Query: 497 APEVFCRNFGEV----SYKSDVYSYGMMVFEM 524
APE+ + E + D+++ G+++F +
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTL 298
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 351 AIKVLNETKGNGEDFINEVASISRT---SHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLE 406
A+K+L + +D + + +R S +T L + F+ H R + E+ + G L
Sbjct: 37 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL- 95
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
F H L + + I L+YLH N +++ D+K N++LD+D
Sbjct: 96 -FFH----LSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHI 148
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFGL K EG + +M GT Y+APEV N + D + G++++EM
Sbjct: 149 KITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 202
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 348 QNVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA------LIYEF 399
+ VAIK + + N E + E+ + + +H N+V+ + A L E+
Sbjct: 41 EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 100
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
G L K++++ E LK + + I+ L YLH RI+H D+KP NI+
Sbjct: 101 CEGGDLRKYLNQ---FENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIV 154
Query: 460 LD---EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYS 516
L + KI D G AK + E GT+ Y+APE+ + V+ D +S
Sbjct: 155 LQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLAPELLEQKKYTVTV--DYWS 209
Query: 517 YGMMVFE-MTG 526
+G + FE +TG
Sbjct: 210 FGTLAFECITG 220
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 350 VAIKVLNETK----GNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL +T+ G EV S H NI+ L G+ + R LI E+ G++
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ + + + + + +A L Y H + R++H DIKP N+LL +
Sbjct: 100 YRELQKLSRFDEQRTATY------ITELANALSYCH---SKRVIHRDIKPENLLLGSNGE 150
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE 523
KI+DFG + T GT+ Y+ PE+ R E K D++S G++ +E
Sbjct: 151 LKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYE 202
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 433 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGT 492
+ RGL+Y+H + I+H D+KP N+ ++ED +I DFGLA R++ MTG T
Sbjct: 140 LLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLA-----RQADEEMTGYVAT 191
Query: 493 IGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
Y APE+ N+ + D++S G ++ E+
Sbjct: 192 RWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 348 QNVAIKVLNE--TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA------LIYEF 399
+ VAIK + + N E + E+ + + +H N+V+ + A L E+
Sbjct: 40 EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
G L K++++ E LK + + I+ L YLH RI+H D+KP NI+
Sbjct: 100 CEGGDLRKYLNQ---FENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIV 153
Query: 460 LD---EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYS 516
L + KI D G AK + E GT+ Y+APE+ + V+ D +S
Sbjct: 154 LQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLAPELLEQKKYTVTV--DYWS 208
Query: 517 YGMMVFE-MTG 526
+G + FE +TG
Sbjct: 209 FGTLAFECITG 219
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 418 NQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC 477
+Q L E + + + RGL+Y+H + I+H D+KP N+ ++ED +I DFGLA
Sbjct: 125 SQALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLA--- 178
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R++ MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 179 --RQADEEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H N++ L E R I + +
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET 130
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +Q+L + + I RGL+Y+H + +LH D+KP N+L++
Sbjct: 131 DLYKLL-------KSQQLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLINTT 180
Query: 464 FCPKISDFGLAKICEGRESIVS-MTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA+I + +T T Y APE+ + G + D++S G ++
Sbjct: 181 CDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 239
Query: 523 EMTGEK 528
EM +
Sbjct: 240 EMLSNR 245
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 365 FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
I E+ + + IV G + ++ E + GSL++ L+ ++ +
Sbjct: 70 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV------LKKAGRIPEQ 123
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIV 484
+L K+++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 124 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-----QLID 176
Query: 485 SMTGA-RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
SM + GT Y++PE S +SD++S G+ + EM
Sbjct: 177 SMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMA 216
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 433 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGT 492
+ RGL+Y+H + I+H D+KP N+ ++ED +I DFGLA R++ MTG T
Sbjct: 132 LLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLA-----RQADEEMTGYVAT 183
Query: 493 IGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
Y APE+ N+ + D++S G ++ E+
Sbjct: 184 RWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 214
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 17/181 (9%)
Query: 348 QNVAIKVLNETKGNGEDFIN----EVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
VA+K+LN K D + E+ ++ H +I+ L ++ E+VS G
Sbjct: 37 HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG 96
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L +I + +E + ++ I ++Y HR ++H D+KP N+LLD
Sbjct: 97 ELFDYICKHGRVEEMEA------RRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAH 147
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KI+DFGL+ + E + + G+ Y APEV + D++S G++++
Sbjct: 148 MNAKIADFGLSNMMSDGEFLRTSCGSP---NYAAPEVISGRL-YAGPEVDIWSCGVILYA 203
Query: 524 M 524
+
Sbjct: 204 L 204
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 42/259 (16%)
Query: 349 NVAIK-VLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
N A K V+ + + E E+ ++S H +V L + + +IYEF+S G L +
Sbjct: 184 NFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE 243
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP- 466
+ ++H K+ + + + +GL ++H +H D+KP NI+
Sbjct: 244 KVADEH-----NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNE 295
Query: 467 -KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF--- 522
K+ DFGL + ++S+ T GT + APEV V Y +D++S G++ +
Sbjct: 296 LKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV--AEGKPVGYYTDMWSVGVLSYILL 350
Query: 523 ----EMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVS 578
GE ++ + +S + +D GI +E+ K++ RK++L
Sbjct: 351 SGLSPFGGENDDETLRNVKSCDWNM-----------DDSAFSGI-SEDGKDFIRKLLLA- 397
Query: 579 LWCIQTNPSDRPSMNRVVE 597
+P+ R ++++ +E
Sbjct: 398 ------DPNTRMTIHQALE 410
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI D+GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 349 NVAIK-VLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
N A K V+ + + E E+ ++S H +V L + + +IYEF+S G L +
Sbjct: 78 NFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE 137
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP- 466
+ ++H K+ + + + +GL ++H +H D+KP NI+
Sbjct: 138 KVADEH-----NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNE 189
Query: 467 -KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
K+ DFGL + ++S+ T GT + APEV V Y +D++S G++ +
Sbjct: 190 LKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV--AEGKPVGYYTDMWSVGVLSY 241
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NAMHYNQTVDIWSVGCIMAEL 216
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 368 EVASISRTSHVNIVTLLG-FCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVL 426
E+A +SR H NI+ +L F +G + ++ + S L FI ++HP ++ L +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFI-DRHP-RLDEPLASYIF 136
Query: 427 YKI--AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIV 484
++ AVG R + +HR DIK NI++ EDF K+ DFG A E +
Sbjct: 137 RQLVSAVGYLRLKDIIHR---------DIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY 187
Query: 485 SMTGARGTIGYIAPEVFCRNFGEVSYKS---DVYSYGMMVFEMTGEKNN-ANVAVDRSSE 540
+ GTI Y APEV N Y+ +++S G+ ++ + E+N + +
Sbjct: 188 TFC---GTIEYCAPEVLMGN----PYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAA 240
Query: 541 IYFPHWVYKRL 551
I+ P+ V K L
Sbjct: 241 IHPPYLVSKEL 251
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + SL+KF K ++ Q + ++L KIAV I + LE+LH + ++H D+KP N+L
Sbjct: 114 LXDTSLDKFY--KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVL 169
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSY--KSDVYSY 517
++ K DFG++ V+ G Y APE + Y KSD++S
Sbjct: 170 INALGQVKXCDFGISGYLVDD---VAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSL 226
Query: 518 GMMVFEMT 525
G+ E+
Sbjct: 227 GITXIELA 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 17/180 (9%)
Query: 351 AIKVLNE---TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLE 406
A+K+L++ K + F E I ++ V L + F+ R ++ E++ G L
Sbjct: 98 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 157
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ E KW Y V +A L+ +H + +H D+KP N+LLD+
Sbjct: 158 NLMSNYDVPE-----KWARFYTAEVVLA--LDAIH---SMGFIHRDVKPDNMLLDKSGHL 207
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSY--KSDVYSYGMMVFEM 524
K++DFG + +E +V A GT YI+PEV G+ Y + D +S G+ ++EM
Sbjct: 208 KLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 17/181 (9%)
Query: 348 QNVAIKVLNETKGNGEDFIN----EVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
VA+K+LN K D + E+ ++ H +I+ L ++ E+VS G
Sbjct: 37 HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG 96
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L +I + +E + ++ I ++Y HR ++H D+KP N+LLD
Sbjct: 97 ELFDYICKHGRVEEMEA------RRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAH 147
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KI+DFGL+ + E + + G+ Y APEV + D++S G++++
Sbjct: 148 MNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVISGRL-YAGPEVDIWSCGVILYA 203
Query: 524 M 524
+
Sbjct: 204 L 204
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 17/180 (9%)
Query: 351 AIKVLNE---TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLE 406
A+K+L++ K + F E I ++ V L + F+ R ++ E++ G L
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 162
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ E KW Y V +A L+ +H + +H D+KP N+LLD+
Sbjct: 163 NLMSNYDVPE-----KWARFYTAEVVLA--LDAIH---SMGFIHRDVKPDNMLLDKSGHL 212
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSY--KSDVYSYGMMVFEM 524
K++DFG + +E +V A GT YI+PEV G+ Y + D +S G+ ++EM
Sbjct: 213 KLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 366 INEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEV 425
I EV+ + H NIVTL L++E++ + L++++ + + +K
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKL-- 104
Query: 426 LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVS 485
+ RGL Y HR ++LH D+KP N+L++E K++DFGLA+ +SI +
Sbjct: 105 ---FLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARA----KSIPT 154
Query: 486 MT--GARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM-TGEKNNANVAVDRSSE 540
T T+ Y P++ G Y + D++ G + +EM TG V+
Sbjct: 155 KTYDNEVVTLWYRPPDIL---LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL- 210
Query: 541 IYFPHWVYKRLELEEDLGLQGI-ENEEDKEY 570
H++++ L + GI NEE K Y
Sbjct: 211 ----HFIFRILGTPTEETWPGILSNEEFKTY 237
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 192
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + M G T Y APE+ N+ + D++S G ++ E+
Sbjct: 193 -RHTDDEMXGXVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 236
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 30/184 (16%)
Query: 395 LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
+ E+++ G L I H + ++ + A I GL++LH + I++ D+K
Sbjct: 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFY------AAEIILGLQFLH---SKGIVYRDLK 145
Query: 455 PHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDV 514
NILLD+D KI+DFG+ K E GT YIAPE+ + ++ D
Sbjct: 146 LDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQ--KYNHSVDW 201
Query: 515 YSYGMMVFEMT-------GEKNNANVAVDRSSEIYFPHWVYKRL----------ELEEDL 557
+S+G++++EM G+ R ++P W+ K E E+ L
Sbjct: 202 WSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRL 261
Query: 558 GLQG 561
G++G
Sbjct: 262 GVRG 265
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 418 NQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC 477
+QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGL
Sbjct: 119 SQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLC--- 172
Query: 478 EGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 --RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 17/180 (9%)
Query: 351 AIKVLNE---TKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA-LIYEFVSNGSLE 406
A+K+L++ K + F E I ++ V L + F+ R ++ E++ G L
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 162
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ E KW Y V +A L+ +H + +H D+KP N+LLD+
Sbjct: 163 NLMSNYDVPE-----KWARFYTAEVVLA--LDAIH---SMGFIHRDVKPDNMLLDKSGHL 212
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSY--KSDVYSYGMMVFEM 524
K++DFG + +E +V A GT YI+PEV G+ Y + D +S G+ ++EM
Sbjct: 213 KLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 25/190 (13%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEF----- 399
+ VAIK L+ +++ + E+ + H N++ LL Y+F
Sbjct: 50 EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
L+K + K E Q L +++L +GL+Y+H ++H D+KP N+
Sbjct: 110 FMQTDLQKIMGLKFSEEKIQYLVYQML--------KGLKYIHSAG---VVHRDLKPGNLA 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
++ED KI DFGLA R + MTG T Y APEV ++ + D++S G
Sbjct: 159 VNEDCELKILDFGLA-----RHADAEMTGYVVTRWYRAPEVIL-SWMHYNQTVDIWSVGC 212
Query: 520 MVFEMTGEKN 529
++ EM K
Sbjct: 213 IMAEMLTGKT 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 195
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + M G T Y APE+ N+ + D++S G ++ E+
Sbjct: 196 -RHTDDEMXGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 239
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + M G T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMAGFVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + M G T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMAGFVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 55 VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 115 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 164
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 165 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 223
Query: 523 EMTGEK 528
EM +
Sbjct: 224 EMLSNR 229
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 30/184 (16%)
Query: 395 LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
+ E+++ G L I H + ++ + A I GL++LH + I++ D+K
Sbjct: 96 FVMEYLNGGDLMYHIQSCHKFDLSRATFY------AAEIILGLQFLH---SKGIVYRDLK 146
Query: 455 PHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDV 514
NILLD+D KI+DFG+ K E GT YIAPE+ + ++ D
Sbjct: 147 LDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDYIAPEILLGQ--KYNHSVDW 202
Query: 515 YSYGMMVFEMT-------GEKNNANVAVDRSSEIYFPHWVYKRL----------ELEEDL 557
+S+G++++EM G+ R ++P W+ K E E+ L
Sbjct: 203 WSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRL 262
Query: 558 GLQG 561
G++G
Sbjct: 263 GVRG 266
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 22/191 (11%)
Query: 351 AIKVLNETKGNGEDFINEVAS----ISRTSHVNIVTLLGFCFEGHRRAL-IYEFVSNGSL 405
A+KV+ + N ++ I+ V + + S+ + L CF+ R + E+V+ G L
Sbjct: 34 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 93
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLH-RGCNTRILHFDIKPHNILLDEDF 464
H ++ +KL E + I+ L YLH RG I++ D+K N+LLD +
Sbjct: 94 --MFH----MQRQRKLPEEHARFYSAEISLALNYLHERG----IIYRDLKLDNVLLDSEG 143
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE 523
K++D+G+ K EG + + GT YIAPE+ ++G + D ++ G+++FE
Sbjct: 144 HIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYG---FSVDWWALGVLMFE 198
Query: 524 MTGEKNNANVA 534
M ++ ++
Sbjct: 199 MMAGRSPFDIV 209
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 22/191 (11%)
Query: 351 AIKVLNETKGNGEDFINEVAS----ISRTSHVNIVTLLGFCFEGHRRAL-IYEFVSNGSL 405
A+KV+ + N ++ I+ V + + S+ + L CF+ R + E+V+ G L
Sbjct: 38 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 97
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLH-RGCNTRILHFDIKPHNILLDEDF 464
H ++ +KL E + I+ L YLH RG I++ D+K N+LLD +
Sbjct: 98 --MFH----MQRQRKLPEEHARFYSAEISLALNYLHERG----IIYRDLKLDNVLLDSEG 147
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE 523
K++D+G+ K EG + + GT YIAPE+ ++G + D ++ G+++FE
Sbjct: 148 HIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYG---FSVDWWALGVLMFE 202
Query: 524 MTGEKNNANVA 534
M ++ ++
Sbjct: 203 MMAGRSPFDIV 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 22/191 (11%)
Query: 351 AIKVLNETKGNGEDFINEVAS----ISRTSHVNIVTLLGFCFEGHRRAL-IYEFVSNGSL 405
A+KV+ + N ++ I+ V + + S+ + L CF+ R + E+V+ G L
Sbjct: 49 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 108
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLH-RGCNTRILHFDIKPHNILLDEDF 464
H ++ +KL E + I+ L YLH RG I++ D+K N+LLD +
Sbjct: 109 --MFH----MQRQRKLPEEHARFYSAEISLALNYLHERG----IIYRDLKLDNVLLDSEG 158
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE 523
K++D+G+ K EG + + GT YIAPE+ ++G + D ++ G+++FE
Sbjct: 159 HIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYG---FSVDWWALGVLMFE 213
Query: 524 MTGEKNNANVA 534
M ++ ++
Sbjct: 214 MMAGRSPFDIV 224
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 168
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + M G T Y APE+ N+ + D++S G ++ E+
Sbjct: 169 -RHTDDEMAGFVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 212
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 415 LETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA 474
L ++KL + + + + +GL Y+H I+H D+KP N+ ++ED KI DFGLA
Sbjct: 119 LMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA 175
Query: 475 KICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEKN--NAN 532
R++ M G T Y APEV N+ + D++S G ++ EM K +
Sbjct: 176 -----RQADSEMXGXVVTRWYRAPEVIL-NWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229
Query: 533 VAVDRSSEIYF-----PHWVYKRLELEEDLG-LQGIENEEDKEYA 571
+D+ EI P +RL+ +E ++G+ E K++A
Sbjct: 230 DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA 274
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 348 QNVAIKVLNE---TKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
Q VA+K++N+ K + + I E++ + H +I+ L ++ E+ N
Sbjct: 39 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 98
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
+ + E + ++ I +EY HR +I+H D+KP N+LLDE
Sbjct: 99 LFDYIVQRDKMSEQEARRFFQ-------QIISAVEYCHR---HKIVHRDLKPENLLLDEH 148
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KI+DFGL+ I + + G+ Y APEV + DV+S G++++
Sbjct: 149 LNVKIADFGLSNIMTDGNFLKTSCGSP---NYAAPEVISGKL-YAGPEVDVWSCGVILYV 204
Query: 524 M 524
M
Sbjct: 205 M 205
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 111 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 160
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 161 XDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 219
Query: 523 EMTGEK 528
EM +
Sbjct: 220 EMLSNR 225
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 348 QNVAIKVLNE---TKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
Q VA+K++N+ K + + I E++ + H +I+ L ++ E+ N
Sbjct: 34 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 93
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
+ + E + ++ I +EY HR +I+H D+KP N+LLDE
Sbjct: 94 LFDYIVQRDKMSEQEARRFFQ-------QIISAVEYCHR---HKIVHRDLKPENLLLDEH 143
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KI+DFGL+ I + + G+ Y APEV + DV+S G++++
Sbjct: 144 LNVKIADFGLSNIMTDGNFLKTSCGSP---NYAAPEVISGKL-YAGPEVDVWSCGVILYV 199
Query: 524 M 524
M
Sbjct: 200 M 200
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 348 QNVAIKVLNE---TKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
Q VA+K++N+ K + + I E++ + H +I+ L ++ E+ N
Sbjct: 30 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 89
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
+ + E + ++ I +EY HR +I+H D+KP N+LLDE
Sbjct: 90 LFDYIVQRDKMSEQEARRFFQ-------QIISAVEYCHR---HKIVHRDLKPENLLLDEH 139
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KI+DFGL+ I + + G+ Y APEV + DV+S G++++
Sbjct: 140 LNVKIADFGLSNIMTDGNFLKTSCGSP---NYAAPEVISGKL-YAGPEVDVWSCGVILYV 195
Query: 524 M 524
M
Sbjct: 196 M 196
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 348 QNVAIKVLNE---TKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
Q VA+K++N+ K + + I E++ + H +I+ L ++ E+ N
Sbjct: 40 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 99
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
+ + E + ++ I +EY HR +I+H D+KP N+LLDE
Sbjct: 100 LFDYIVQRDKMSEQEARRFFQ-------QIISAVEYCHR---HKIVHRDLKPENLLLDEH 149
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KI+DFGL+ I + + G+ Y APEV + DV+S G++++
Sbjct: 150 LNVKIADFGLSNIMTDGNFLKTSCGSP---NYAAPEVISGKL-YAGPEVDVWSCGVILYV 205
Query: 524 M 524
M
Sbjct: 206 M 206
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 111 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 160
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 161 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 219
Query: 523 EMTGEK 528
EM +
Sbjct: 220 EMLSNR 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 28/187 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ VGI ++LH I+H D+KP NI+
Sbjct: 110 LMDANLSQVIQ----MELDHERMSYLLYQMLVGI----KHLHSAG---IIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEM 524
G+++ EM
Sbjct: 212 GVIMGEM 218
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 365 FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
I E+ + + IV G + ++ E + GSL++ L+ ++ +
Sbjct: 54 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV------LKKAGRIPEQ 107
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK--ICEGRES 482
+L K+++ + +GL YL +I+H D+KP NIL++ K+ DFG++ I E
Sbjct: 108 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE 165
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
V GT Y++PE S +SD++S G+ + EM
Sbjct: 166 FV------GTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMA 200
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 28/187 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ VGI ++LH I+H D+KP NI+
Sbjct: 110 LMDANLSQVIQ----MELDHERMSYLLYQMLVGI----KHLHSAG---IIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEM 524
G+++ EM
Sbjct: 212 GVIMGEM 218
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 111 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 160
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 161 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 219
Query: 523 EMTGEK 528
EM +
Sbjct: 220 EMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 115 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 164
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 165 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 223
Query: 523 EMTGEK 528
EM +
Sbjct: 224 EMLSNR 229
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 348 QNVAIKV--LNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
Q VAIK+ L E + ED E+ +S+ + G +G + +I E++ GS
Sbjct: 49 QVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSA 108
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
+ P + Q + + I +GL+YLH + + +H DIK N+LL E
Sbjct: 109 LDLLRA-GPFDEFQ------IATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGD 158
Query: 466 PKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
K++DFG+A + ++ + GT ++APEV ++ K+D++S G+ E+
Sbjct: 159 VKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQS--AYDSKADIWSLGITAIELA 214
Query: 526 -GEKNNANV 533
GE N+++
Sbjct: 215 KGEPPNSDM 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 24/198 (12%)
Query: 351 AIKVLNETKGNGEDFINEVASISR-TSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKF 408
A+K+++++K D E+ + R H NI+TL +G ++ E G L +K
Sbjct: 51 AVKIIDKSK---RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKI 107
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL-LDEDFCP- 466
+ +K E VL+ I + +EYLH ++H D+KP NIL +DE P
Sbjct: 108 LRQKFFSEREAS---AVLFTIT----KTVEYLH---AQGVVHRDLKPSNILYVDESGNPE 157
Query: 467 --KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE- 523
+I DFG AK ++ T ++APEV R + + D++S G++++
Sbjct: 158 SIRICDFGFAKQLRAENGLLXTPCY--TANFVAPEVLERQGYDAA--CDIWSLGVLLYTX 213
Query: 524 MTGEKNNANVAVDRSSEI 541
+TG AN D EI
Sbjct: 214 LTGYTPFANGPDDTPEEI 231
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI FGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 15/110 (13%)
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRE--- 481
V I + IA +E+LH + ++H D+KP NI D K+ DFGL + E
Sbjct: 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
Query: 482 -------SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+ + G GT Y++PE N S+K D++S G+++FE+
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFEL 269
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 111 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 160
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 161 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 219
Query: 523 EMTGEK 528
EM +
Sbjct: 220 EMLSNR 225
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 15/110 (13%)
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRE--- 481
V I + IA +E+LH + ++H D+KP NI D K+ DFGL + E
Sbjct: 119 VCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 482 -------SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+ TG GT Y++PE N S+K D++S G+++FE+
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFEL 223
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 20/181 (11%)
Query: 350 VAIKVLNETK----GNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VAIK++++ G + NEV + H +I+ L + + + L+ E NG +
Sbjct: 39 VAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM 98
Query: 406 EKFIHEK-HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+++ + P N+ + +++I G+ YLH + ILH D+ N+LL +
Sbjct: 99 NRYLKNRVKPFSENEARHF--MHQIITGML----YLH---SHGILHRDLTLSNLLLTRNM 149
Query: 465 CPKISDFGLA-KICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KI+DFGLA ++ E ++ GT YI+PE+ R+ + +SDV+S G M +
Sbjct: 150 NIKIADFGLATQLKMPHEKHYTLC---GTPNYISPEIATRSAHGL--ESDVWSLGCMFYT 204
Query: 524 M 524
+
Sbjct: 205 L 205
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI D GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 113 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 162
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 163 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 221
Query: 523 EMTGEK 528
EM +
Sbjct: 222 EMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 59 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 118
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 119 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 168
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 169 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 227
Query: 523 EMTGEK 528
EM +
Sbjct: 228 EMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 111 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 160
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 161 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 219
Query: 523 EMTGEK 528
EM +
Sbjct: 220 EMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 116 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 165
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 166 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 224
Query: 523 EMTGEK 528
EM +
Sbjct: 225 EMLSNR 230
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVL 426
E+ +S+ + G + + +I E++ GS + E PL+ Q +
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQ------I 121
Query: 427 YKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSM 486
I I +GL+YLH + + +H DIK N+LL E K++DFG+A + ++ +
Sbjct: 122 ATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKR 176
Query: 487 TGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
GT ++APEV ++ K+D++S G+ E+
Sbjct: 177 NXFVGTPFWMAPEVIKQS--AYDSKADIWSLGITAIEL 212
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 57 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 116
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 117 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 166
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 167 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 225
Query: 523 EMTGEK 528
EM +
Sbjct: 226 EMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 48 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 107
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 108 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 157
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 158 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 216
Query: 523 EMTGEK 528
EM +
Sbjct: 217 EMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 115 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 164
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 223
Query: 523 EMTGEK 528
EM +
Sbjct: 224 EMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 109 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 158
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 159 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 217
Query: 523 EMTGEK 528
EM +
Sbjct: 218 EMLSNR 223
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 22/191 (11%)
Query: 351 AIKVLNETKGNGEDFINEVAS----ISRTSHVNIVTLLGFCFEGHRRAL-IYEFVSNGSL 405
A++V+ + N ++ I+ V + + S+ + L CF+ R + E+V+ G L
Sbjct: 81 AMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 140
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLH-RGCNTRILHFDIKPHNILLDEDF 464
H ++ +KL E + I+ L YLH RG I++ D+K N+LLD +
Sbjct: 141 --MFH----MQRQRKLPEEHARFYSAEISLALNYLHERG----IIYRDLKLDNVLLDSEG 190
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFE 523
K++D+G+ K EG + + GT YIAPE+ ++G + D ++ G+++FE
Sbjct: 191 HIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGEDYG---FSVDWWALGVLMFE 245
Query: 524 MTGEKNNANVA 534
M ++ ++
Sbjct: 246 MMAGRSPFDIV 256
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI D GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 109 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 158
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 159 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 217
Query: 523 EMTGEK 528
EM +
Sbjct: 218 EMLSNR 223
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 32/130 (24%)
Query: 433 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFC---PKISDFGLAK----ICEGRESIVS 485
I G+ YLH+ I+H D+KP NILL + KI DFG+++ CE RE +
Sbjct: 140 ILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIM-- 194
Query: 486 MTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-------TGEKNN------AN 532
GT Y+APE+ N+ ++ +D+++ G++ + + GE N +
Sbjct: 195 -----GTPEYLAPEIL--NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ 247
Query: 533 VAVDRSSEIY 542
V VD S E +
Sbjct: 248 VNVDYSEETF 257
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 350 VAIKVLNETKGN-GEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
V +KVL++ N E F + +S+ SH ++V G CF G L+ EFV GSL+ +
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTY 102
Query: 409 IHEKHPLETNQKLKWEVLYKIAVG--IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ + K +L+K+ V +A + +L ++H ++ NILL +
Sbjct: 103 LKK-------NKNCINILWKLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDR 152
Query: 467 KISDFGLAKICEGRESIVSMTG--ARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K + K+ + SI + + I ++ PE N ++ +D +S+G ++E+
Sbjct: 153 KTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI-ENPKNLNLATDKWSFGTTLWEI 211
Query: 525 TGEKNNANVAVDRSSEIYF 543
+ A+D ++ F
Sbjct: 212 CSGGDKPLSALDSQRKLQF 230
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEF----- 399
+ VAIK L+ +++ + E+ + H N++ LL Y+F
Sbjct: 68 EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 127
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
L+K + + E Q L +++L +GL+Y+H + ++H D+KP N+
Sbjct: 128 FMQTDLQKIMGMEFSEEKIQYLVYQML--------KGLKYIH---SAGVVHRDLKPGNLA 176
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
++ED KI DFGLA R + MTG T Y APEV ++ + D++S G
Sbjct: 177 VNEDCELKILDFGLA-----RHADAEMTGYVVTRWYRAPEVIL-SWMHYNQTVDIWSVGC 230
Query: 520 MVFEMTGEKN 529
++ EM K
Sbjct: 231 IMAEMLTGKT 240
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DF LA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 54/274 (19%)
Query: 349 NVAIKVLNETKGNGED---FINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VAI++++ + N + F EV + +T H N+V +G C A+I +L
Sbjct: 57 EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116
Query: 406 EKFIHE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ + K L+ N+ +IA I +G+ YLH ILH D+K N+ D
Sbjct: 117 YSVVRDAKIVLDVNKT------RQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGK 167
Query: 465 CPKISDFGLAKICEGRESIVSMTGAR--------GTIGYIAPEVFCRNFGEV-------S 509
I+DFGL I S V G R G + ++APE+ + + S
Sbjct: 168 VV-ITDFGLFSI-----SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFS 221
Query: 510 YKSDVYSYGMMVFEMTGEKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGI---ENEE 566
SDV++ G + +E+ + W +K E + G N
Sbjct: 222 KHSDVFALGTIWYELHARE-----------------WPFKTQPAEAIIWQMGTGMKPNLS 264
Query: 567 DKEYARKMILVSLWCIQTNPSDRPSMNRVVEMLE 600
+++ + L+C +RP+ ++++MLE
Sbjct: 265 QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + + +
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGA 130
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 131 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 180
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 181 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 239
Query: 523 EMTGEK 528
EM +
Sbjct: 240 EMLSNR 245
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH I+H D+KP NI+
Sbjct: 110 LMDANLXQVIQ----MELDHERMSYLLYQMLXGI----KHLHSAG---IIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 212 GCIMGEMVRHK 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 419 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI D GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLA---- 172
Query: 479 GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 130
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 131 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 180
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + +T T Y APE+ + G + D++S G ++
Sbjct: 181 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 239
Query: 523 EMTGEK 528
EM +
Sbjct: 240 EMLSNR 245
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 433 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE-GRESIVSMTGARG 491
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + + +T
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 492 TIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
T Y APE+ + G + D++S G ++ EM +
Sbjct: 192 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVL 426
E+ +S+ + G + + +I E++ GS + E PL+ Q +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQ------I 106
Query: 427 YKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSM 486
I I +GL+YLH + + +H DIK N+LL E K++DFG+A + ++ +
Sbjct: 107 ATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKR 161
Query: 487 TGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
GT ++APEV ++ K+D++S G+ E+
Sbjct: 162 NXFVGTPFWMAPEVIKQS--AYDSKADIWSLGITAIEL 197
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVL 426
E+ +S+ + G + + +I E++ GS + E PL+ Q +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQ------I 106
Query: 427 YKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSM 486
I I +GL+YLH + + +H DIK N+LL E K++DFG+A + ++ +
Sbjct: 107 ATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKR 161
Query: 487 TGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
GT ++APEV ++ K+D++S G+ E+
Sbjct: 162 NTFVGTPFWMAPEVIKQS--AYDSKADIWSLGITAIEL 197
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+++D+ K++DFGLAK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 20/148 (13%)
Query: 381 VTLLGFCFEG-HRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEY 439
+T L CF+ R + E+V+ G L I + + Q V Y A I+ GL +
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQA----VFY--AAEISIGLFF 135
Query: 440 LHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGAR---GTIGYI 496
LH+ I++ D+K N++LD + KI+DFG+ K E ++ R GT YI
Sbjct: 136 LHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK-----EHMMDGVTTREFCGTPDYI 187
Query: 497 APEVFCRNFGEVSYKSDVYSYGMMVFEM 524
APE+ + D ++YG++++EM
Sbjct: 188 APEIIA--YQPYGKSVDWWAYGVLLYEM 213
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 366 INEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKL 421
+ E+ + R H NI+ + E + I + + L K + +H +N +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHI 130
Query: 422 KWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE-GR 480
+ LY+I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ +
Sbjct: 131 CY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
Query: 481 ESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ +T T Y APE+ + G + D++S G ++ EM +
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVL 426
E+ +S+ + G + + +I E++ GS + E PL+ Q +
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQ------I 126
Query: 427 YKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSM 486
I I +GL+YLH + + +H DIK N+LL E K++DFG+A + ++ +
Sbjct: 127 ATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKR 181
Query: 487 TGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
GT ++APEV ++ K+D++S G+ E+
Sbjct: 182 NTFVGTPFWMAPEVIKQS--AYDSKADIWSLGITAIEL 217
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 433 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE-GRESIVSMTGARG 491
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + + +T
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 492 TIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
T Y APE+ + G + D++S G ++ EM +
Sbjct: 192 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 433 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE-GRESIVSMTGARG 491
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + + +T
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 492 TIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
T Y APE+ + G + D++S G ++ EM +
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR ++
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA---- 199
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
+ VAIK++++T+ N + EV + +H NIV L LI E+ S G
Sbjct: 41 REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 100
Query: 405 LEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ + L + ++K + I ++Y H+ RI+H D+K N+LLD D
Sbjct: 101 VFDY------LVAHGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADM 151
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG + + + GA Y APE+F + + DV+S G++++ +
Sbjct: 152 NIKIADFGFSNEFTVGGKLDAFCGAP---PYAAPELFQGKKYD-GPEVDVWSLGVILYTL 207
Query: 525 T 525
Sbjct: 208 V 208
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 348 QNVAIKVLNETKGNGEDF--INEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
Q A K++N K + D + A I R H NIV L E LI++ V+ G
Sbjct: 48 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE 107
Query: 405 L-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L E + ++ E + + I + LE + ++H D+KP N+LL
Sbjct: 108 LFEDIVAREYYSEADA----------SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASK 157
Query: 464 F---CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYKSDVYSYGM 519
K++DFGLA EG + + G GT GY++PEV ++ +G+ D+++ G+
Sbjct: 158 LKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGK---PVDLWACGV 212
Query: 520 MVF 522
+++
Sbjct: 213 ILY 215
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 33/258 (12%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFC--FEGHRRALIYEFVSNGSLEKFI 409
+KV + + DF E + SH N++ +LG C LI + GSL +
Sbjct: 41 LKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVL 100
Query: 410 HEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKIS 469
HE TN + K A+ ARG +LH I + ++ +DED +IS
Sbjct: 101 HEG----TNFVVDQSQAVKFALDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARIS 155
Query: 470 --DFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS-DVYSYGMMVFEMTG 526
D + GR ++APE + + + +S D +S+ ++++E+
Sbjct: 156 XADVKFSFQSPGRXY---------APAWVAPEALQKKPEDTNRRSADXWSFAVLLWELV- 205
Query: 527 EKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQTNP 586
+ E+ F E+ + L+G+ + + + C +P
Sbjct: 206 -----------TREVPFAD--LSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDP 252
Query: 587 SDRPSMNRVVEMLEGSLD 604
+ RP + +V +LE D
Sbjct: 253 AKRPKFDXIVPILEKXQD 270
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH I+H D+KP NI+
Sbjct: 110 LMDANLXQVIQ----MELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 212 GCIMGEMVRHK 222
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 27/189 (14%)
Query: 351 AIKVLNETKGNG----------EDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEF 399
A+K+++ T G E + EV + + S H NI+ L L+++
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ G L ++ EK L + KI + + LH+ I+H D+KP NIL
Sbjct: 106 MKKGELFDYLTEKVTLSEKET------RKIMRALLEVICALHK---LNIVHRDLKPENIL 156
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CR---NFGEVSYKSDVY 515
LD+D K++DFG + + E + S+ GT Y+APE+ C N + D++
Sbjct: 157 LDDDMNIKLTDFGFSCQLDPGEKLRSVC---GTPSYLAPEIIECSMNDNHPGYGKEVDMW 213
Query: 516 SYGMMVFEM 524
S G++++ +
Sbjct: 214 STGVIMYTL 222
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ VGI ++LH I+H D+KP NI+
Sbjct: 110 LMDANLSQVIQ----MELDHERMSYLLYQMLVGI----KHLHSAG---IIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG----MGYKENVDIWSV 211
Query: 518 GMMVFEM 524
G ++ EM
Sbjct: 212 GCIMGEM 218
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+DE +++DFG AK +GR +
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC---- 186
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 187 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 220
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ K++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---- 200
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ K++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ K++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ K++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEF----------VS 401
I++ E +G I E++ + H NIV L R L++E V
Sbjct: 34 IRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC 93
Query: 402 NGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G LE + L+ + G+ Y H + R+LH D+KP N+L++
Sbjct: 94 EGGLESVTAKSFLLQ----------------LLNGIAYCH---DRRVLHRDLKPQNLLIN 134
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGM 519
+ KI+DFGLA+ + T T+ Y AP+V G Y + D++S G
Sbjct: 135 REGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVL---MGSKKYSTTIDIWSVGC 189
Query: 520 MVFEMT 525
+ EM
Sbjct: 190 IFAEMV 195
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEF----------VS 401
I++ E +G I E++ + H NIV L R L++E V
Sbjct: 34 IRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC 93
Query: 402 NGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G LE + L+ + G+ Y H + R+LH D+KP N+L++
Sbjct: 94 EGGLESVTAKSFLLQ----------------LLNGIAYCH---DRRVLHRDLKPQNLLIN 134
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGM 519
+ KI+DFGLA+ + T T+ Y AP+V G Y + D++S G
Sbjct: 135 REGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVL---MGSKKYSTTIDIWSVGC 189
Query: 520 MVFEMT 525
+ EM
Sbjct: 190 IFAEMV 195
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 395 LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 454
++ E++ G L + E KW Y V +A L+ +H + ++H D+K
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPE-----KWAKFYTAEVVLA--LDAIH---SMGLIHRDVK 201
Query: 455 PHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSY--KS 512
P N+LLD+ K++DFG + +V A GT YI+PEV G+ Y +
Sbjct: 202 PDNMLLDKHGHLKLADFGTCMKMD-ETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGREC 260
Query: 513 DVYSYGMMVFEM 524
D +S G+ +FEM
Sbjct: 261 DWWSVGVFLFEM 272
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX---- 199
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
+++ ++ +G + E+ + H NIV L + L++EF + L+K+
Sbjct: 35 VRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDS 93
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
N L E++ + +GL + H + +LH D+KP N+L++ + K++DF
Sbjct: 94 -----CNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADF 145
Query: 472 GLAKI------CEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFE 523
GLA+ C E + T+ Y P+V FG Y + D++S G + E
Sbjct: 146 GLARAFGIPVRCYSAEVV--------TLWYRPPDVL---FGAKLYSTSIDMWSAGCIFAE 194
Query: 524 MT 525
+
Sbjct: 195 LA 196
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 115 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 164
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + + T Y APE+ + G + D++S G ++
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 223
Query: 523 EMTGEK 528
EM +
Sbjct: 224 EMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 18/186 (9%)
Query: 350 VAIKVLN--ETKGNGEDFINEVASISRTSHVNIV----TLLGFCFEGHRRALIYEFVSNG 403
VAIK ++ E + + + E+ + R H NI+ + E + I + +
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L K + +H +N + + LY+I RGL+Y+H + +LH D+KP N+LL+
Sbjct: 116 DLYKLLKTQH--LSNDHICY-FLYQIL----RGLKYIH---SANVLHRDLKPSNLLLNTT 165
Query: 464 FCPKISDFGLAKICE-GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
KI DFGLA++ + + + T Y APE+ + G + D++S G ++
Sbjct: 166 CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILA 224
Query: 523 EMTGEK 528
EM +
Sbjct: 225 EMLSNR 230
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEF----------VS 401
I++ E +G I E++ + H NIV L R L++E V
Sbjct: 34 IRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC 93
Query: 402 NGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 461
G LE + L+ + G+ Y H + R+LH D+KP N+L++
Sbjct: 94 EGGLESVTAKSFLLQ----------------LLNGIAYCH---DRRVLHRDLKPQNLLIN 134
Query: 462 EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGM 519
+ KI+DFGLA+ + T T+ Y AP+V G Y + D++S G
Sbjct: 135 REGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVL---MGSKKYSTTIDIWSVGC 189
Query: 520 MVFEMT 525
+ EM
Sbjct: 190 IFAEMV 195
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVL 426
E+ + + + IV L G EG + E + GSL + + E+ L ++ L
Sbjct: 134 EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-----AL 188
Query: 427 YKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC-PKISDFGLAKIC---EG-RE 481
Y + + GLEYLH + RILH D+K N+LL D + DFG A +C +G +
Sbjct: 189 YYLGQAL-EGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGK 243
Query: 482 SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
S+++ GT ++APEV K DV+S M+ M
Sbjct: 244 SLLTGDYIPGTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHM 284
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH I+H D+KP NI+
Sbjct: 110 LMDANLXQVIQ----MELDHERMSYLLYQMLXGI----KHLHSAG---IIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 212 GCIMGEMVRHK 222
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+++D+ +++DFGLAK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 366 INEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEV 425
+ E+ + + S IV L G EG + E + GSL + I + L ++
Sbjct: 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----A 152
Query: 426 LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC-PKISDFGLAKICEG---RE 481
LY + + GLEYLH RILH D+K N+LL D + DFG A + +
Sbjct: 153 LYYLGQAL-EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208
Query: 482 SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
S+++ GT ++APEV K D++S M+ M
Sbjct: 209 SLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHM 249
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 27/183 (14%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKF 408
VA+K + E+ E+ + H NIV A+I E+ S G L E+
Sbjct: 48 VAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI 107
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-- 466
+ E + ++ L G+ Y H + +I H D+K N LLD P
Sbjct: 108 CNAGRFSEDEARFFFQQLLS-------GVSYCH---SMQICHRDLKLENTLLDGSPAPRL 157
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIG---YIAPEVFCRNF--GEVSYKSDVYSYGMMV 521
KI DFG +K S V + + T+G YIAPEV R G++ +DV+S G+ +
Sbjct: 158 KICDFGYSK------SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKI---ADVWSCGVTL 208
Query: 522 FEM 524
+ M
Sbjct: 209 YVM 211
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVL 426
E+ + + + IV L G EG + E + GSL + + E+ L ++ L
Sbjct: 115 EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-----AL 169
Query: 427 YKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC-PKISDFGLAKICEGRESIVS 485
Y + + GLEYLH + RILH D+K N+LL D + DFG A +C + +
Sbjct: 170 YYLGQAL-EGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGK 224
Query: 486 --MTG--ARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+TG GT ++APEV K DV+S M+ M
Sbjct: 225 DLLTGDYIPGTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHM 265
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 366 INEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEV 425
+ E+ + + S IV L G EG + E + GSL + I + L ++
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----A 166
Query: 426 LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC-PKISDFGLAKICEG---RE 481
LY + + GLEYLH RILH D+K N+LL D + DFG A + +
Sbjct: 167 LYYLGQAL-EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 222
Query: 482 SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
S+++ GT ++APEV K D++S M+ M
Sbjct: 223 SLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHM 263
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+++D+ K++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 200
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+++D+ K++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+++D+ K++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 200
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+++D+ K++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 200
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+++D+ K++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 200
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+++D+ K++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 102
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH I+H D+KP NI+
Sbjct: 103 LMDANLXQVIQ----MELDHERMSYLLYQMLXGI----KHLHSAG---IIHRDLKPSNIV 151
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 152 VKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 204
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 205 GCIMGEMVRHK 215
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 366 INEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEV 425
+ E+ + + S IV L G EG + E + GSL + I + L ++
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----A 168
Query: 426 LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC-PKISDFGLAKICEG---RE 481
LY + + GLEYLH RILH D+K N+LL D + DFG A + +
Sbjct: 169 LYYLGQAL-EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 224
Query: 482 SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
S+++ GT ++APEV K D++S M+ M
Sbjct: 225 SLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHM 265
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 27/189 (14%)
Query: 351 AIKVLNETKGNG----------EDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEF 399
A+K+++ T G E + EV + + S H NI+ L L+++
Sbjct: 33 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 92
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ G L ++ EK L + KI + + LH+ I+H D+KP NIL
Sbjct: 93 MKKGELFDYLTEKVTLSEKET------RKIMRALLEVICALHK---LNIVHRDLKPENIL 143
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CR---NFGEVSYKSDVY 515
LD+D K++DFG + + E + + GT Y+APE+ C N + D++
Sbjct: 144 LDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEIIECSMNDNHPGYGKEVDMW 200
Query: 516 SYGMMVFEM 524
S G++++ +
Sbjct: 201 STGVIMYTL 209
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC---- 200
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
+ VAIK++++T+ N + EV + +H NIV L LI E+ S G
Sbjct: 38 REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 97
Query: 405 LEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ + L + ++K + I ++Y H+ RI+H D+K N+LLD D
Sbjct: 98 VFDY------LVAHGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADM 148
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG + + + G+ Y APE+F + + DV+S G++++ +
Sbjct: 149 NIKIADFGFSNEFTVGGKLDTFCGSP---PYAAPELFQGKKYD-GPEVDVWSLGVILYTL 204
Query: 525 T 525
Sbjct: 205 V 205
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 348 QNVAIKVLNETKGNGEDF--INEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
Q A K++N K + D + A I R H NIV L E L+++ V+ G
Sbjct: 57 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 116
Query: 405 L-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD-- 461
L E + ++ E + +++I LE ++ I+H D+KP N+LL
Sbjct: 117 LFEDIVAREYYSEADAS---HCIHQI-------LESVNHIHQHDIVHRDLKPENLLLASK 166
Query: 462 -EDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYKSDVYSYGM 519
+ K++DFGLA +G + + G GT GY++PEV ++ +G+ D+++ G+
Sbjct: 167 CKGAAVKLADFGLAIEVQGEQQ--AWFGFAGTPGYLSPEVLRKDPYGK---PVDIWACGV 221
Query: 520 MVF 522
+++
Sbjct: 222 ILY 224
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC---- 185
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 186 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 219
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 192
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 193 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 226
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 194
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 195 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 228
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 192
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 193 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 226
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH I+H D+KP NI+
Sbjct: 110 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 212 GCIMGEMVRHK 222
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 27/189 (14%)
Query: 351 AIKVLNETKGNG----------EDFINEVASISRTS-HVNIVTLLGFCFEGHRRALIYEF 399
A+K+++ T G E + EV + + S H NI+ L L+++
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ G L ++ EK L + KI + + LH+ I+H D+KP NIL
Sbjct: 106 MKKGELFDYLTEKVTLSEKET------RKIMRALLEVICALHK---LNIVHRDLKPENIL 156
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVF-CR---NFGEVSYKSDVY 515
LD+D K++DFG + + E + + GT Y+APE+ C N + D++
Sbjct: 157 LDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEIIECSMNDNHPGYGKEVDMW 213
Query: 516 SYGMMVFEM 524
S G++++ +
Sbjct: 214 STGVIMYTL 222
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 220
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 221 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 254
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 29/196 (14%)
Query: 366 INEVASISRTSHVNIVTLLGFCFEGHRRAL-IYEFVSNGSLEKFIHEKHPLETNQKLKWE 424
+ E +S + +T L CF+ R + EFV+ G L I + + + +
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFY- 129
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK--ICEGRES 482
A I L +LH + I++ D+K N+LLD + K++DFG+ K IC G
Sbjct: 130 -----AAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG--- 178
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM-------TGEKNNANV 533
V+ GT YIAPE+ E+ Y D ++ G++++EM E +
Sbjct: 179 -VTTATFCGTPDYIAPEI----LQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF 233
Query: 534 AVDRSSEIYFPHWVYK 549
+ E+ +P W+++
Sbjct: 234 EAILNDEVVYPTWLHE 249
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 367 NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKFIHEKHPLETNQKLKWEV 425
NE++ +++ H ++ L + + LI EF+S G L ++ E + + + + +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY-- 154
Query: 426 LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP--KISDFGLAKICEGRESI 483
GL+++H I+H DIKP NI+ + KI DFGLA E I
Sbjct: 155 ----MRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-I 206
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMM 520
V +T A T + APE+ R V + +D+++ G++
Sbjct: 207 VKVTTA--TAEFAAPEIVDRE--PVGFYTDMWAIGVL 239
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 350 VAIKVLNETKGN-GEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
V +KVL++ N E F + +S+ SH ++V G C G L+ EFV GSL+ +
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102
Query: 409 IHEKHPLETNQKLKWEVLYKIAVG--IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP 466
+ + K +L+K+ V +A + +L ++H ++ NILL +
Sbjct: 103 LKK-------NKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDR 152
Query: 467 KISDFGLAKICEGRESIVSMTG--ARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
K + K+ + SI + + I ++ PE N ++ +D +S+G ++E+
Sbjct: 153 KTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI-ENPKNLNLATDKWSFGTTLWEI 211
Query: 525 TGEKNNANVAVDRSSEIYF 543
+ A+D ++ F
Sbjct: 212 CSGGDKPLSALDSQRKLQF 230
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 220
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 221 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 367 NEVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKW 423
E+ + + H NIV L F + G ++ ++Y + + + ++ +H Q L
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 424 EVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRES 482
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 122 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 179 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+++D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+++D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIIISK--GYNKAVDWWALGVLIYEMAA 233
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 18/181 (9%)
Query: 348 QNVAIKVLNETKGNGEDFI----NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNG 403
Q VA+K ++ D E++ + H +I+ L ++ E+ + G
Sbjct: 35 QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGG 93
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L +I EK + ++ ++ I +EY HR +I+H D+KP N+LLD++
Sbjct: 94 ELFDYIVEKKRMTEDEGRRF------FQQIICAIEYCHR---HKIVHRDLKPENLLLDDN 144
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KI+DFGL+ I + + G+ Y APEV + DV+S G++++
Sbjct: 145 LNVKIADFGLSNIMTDGNFLKTSCGSP---NYAAPEVINGKL-YAGPEVDVWSCGIVLYV 200
Query: 524 M 524
M
Sbjct: 201 M 201
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH I+H D+KP NI+
Sbjct: 110 LMDANLSQVIQ----MELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEM 524
G ++ EM
Sbjct: 212 GCIMGEM 218
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
+ VA+K++++T+ N + EV + +H NIV L L+ E+ S G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 405 LEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ + L + ++K + I ++Y H+ I+H D+K N+LLD D
Sbjct: 100 VFDY------LVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADM 150
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG + + + GA Y APE+F + + DV+S G++++ +
Sbjct: 151 NIKIADFGFSNEFTFGNKLDAFCGAP---PYAAPELFQGKKYD-GPEVDVWSLGVILYTL 206
Query: 525 T 525
Sbjct: 207 V 207
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 361 NGEDFIN-EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLE 416
G+ F N E+ + + H NIV L F + G ++ +Y + + + ++ +H
Sbjct: 55 QGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 114
Query: 417 TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAK 475
Q L + + R L Y+H + I H DIKP N+LLD D K+ DFG AK
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
Query: 476 ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
E VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 172 QLVRGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G+++++M
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYQMAA 233
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 352 IKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHE 411
+++ ++ +G + E+ + H NIV L + L++EF L+K+
Sbjct: 35 VRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDS 93
Query: 412 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 471
N L E++ + +GL + H + +LH D+KP N+L++ + K+++F
Sbjct: 94 -----CNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANF 145
Query: 472 GLAKI------CEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFE 523
GLA+ C E + T+ Y P+V FG Y + D++S G + E
Sbjct: 146 GLARAFGIPVRCYSAEVV--------TLWYRPPDVL---FGAKLYSTSIDMWSAGCIFAE 194
Query: 524 MT 525
+
Sbjct: 195 LA 196
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 361 NGEDFIN-EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLE 416
G+ F N E+ + + H NIV L F + G ++ +Y + + + ++ +H
Sbjct: 55 QGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 114
Query: 417 TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAK 475
Q L + + R L Y+H + I H DIKP N+LLD D K+ DFG AK
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
Query: 476 ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
E VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 172 QLVRGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 148 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 196
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 197 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 249
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 250 GCIMGEMVRHK 260
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 348 QNVAIKVLNETKGNGEDF--INEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
Q A K++N K + D + A I R H NIV L E L+++ V+ G
Sbjct: 30 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 89
Query: 405 L-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL--- 460
L E + ++ E + + I + LE ++ I+H D+KP N+LL
Sbjct: 90 LFEDIVAREYYSEADA----------SHCIQQILESVNHCHLNGIVHRDLKPENLLLASK 139
Query: 461 DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYKSDVYSYGM 519
+ K++DFGLA +G + + G GT GY++PEV ++ +G+ D+++ G+
Sbjct: 140 SKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEVLRKDPYGK---PVDMWACGV 194
Query: 520 MVF 522
+++
Sbjct: 195 ILY 197
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 366 INEVASISRTSHVNIVTLLGF----CFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKL 421
+ E+ + H NI+T+ FE I + + L + I + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQML 109
Query: 422 KWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE--- 478
+ + R ++ LH G N ++H D+KP N+L++ + K+ DFGLA+I +
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 479 -------GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
G++S MT T Y APEV + + S DV+S G ++ E+
Sbjct: 167 ADNSEPTGQQS--GMTEXVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 157 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 213
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 214 VSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 250
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 372 ISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAV 431
+ H IV L+ G + LI E++S G L F+ LE +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQ----LEREGIFMEDTACFYLA 128
Query: 432 GIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGAR- 490
I+ L +LH+ I++ D+KP NI+L+ K++DFGL K ESI T
Sbjct: 129 EISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-----ESIHDGTVTHX 180
Query: 491 --GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
GTI Y+APE+ R+ + D +S G ++++M
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAV--DWWSLGALMYDM 214
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 361 NGEDFIN-EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLE 416
G+ F N E+ + + H NIV L F + G ++ +Y + + ++ +H
Sbjct: 55 QGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSR 114
Query: 417 TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAK 475
Q L + + R L Y+H + I H DIKP N+LLD D K+ DFG AK
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
Query: 476 ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
E VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 172 QLVRGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 372 ISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAV 431
+ H IV L+ G + LI E++S G L F+ LE +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQ----LEREGIFMEDTACFYLA 128
Query: 432 GIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGAR- 490
I+ L +LH+ I++ D+KP NI+L+ K++DFGL K ESI T
Sbjct: 129 EISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-----ESIHDGTVTHT 180
Query: 491 --GTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
GTI Y+APE+ R+ + D +S G ++++M
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAV--DWWSLGALMYDM 214
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 110 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 212 GCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 110
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 111 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 159
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 160 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 212
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 213 GCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 49 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 108
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 109 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 157
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 158 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 210
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 211 GCIMGEMVRHK 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 348 QNVAIKVLNETKGNGEDF--INEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
Q A K++N K + D + A I R H NIV L E L+++ V+ G
Sbjct: 30 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 89
Query: 405 L-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL--- 460
L E + ++ E + + I + LE ++ I+H D+KP N+LL
Sbjct: 90 LFEDIVAREYYSEADA----------SHCIQQILESVNHCHLNGIVHRDLKPENLLLASK 139
Query: 461 DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYKSDVYSYGM 519
+ K++DFGLA +G + + G GT GY++PEV ++ +G+ D+++ G+
Sbjct: 140 SKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEVLRKDPYGK---PVDMWACGV 194
Query: 520 MVF 522
+++
Sbjct: 195 ILY 197
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 157 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 213
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 214 VSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 250
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 91 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 150
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 151 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 207
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 208 VSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 244
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 148 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 196
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 197 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 249
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 250 GCIMGEMVRHK 260
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 130
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 131 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 187
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 188 VSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKF 408
VA+K + + E+ E+ + H NIV A++ E+ S G L E+
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-- 466
+ E + ++ L G+ Y H ++ H D+K N LLD P
Sbjct: 107 CNAGRFSEDEARFFFQQLIS-------GVSYAH---AMQVAHRDLKLENTLLDGSPAPRL 156
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNF--GEVSYKSDVYSYGMMVFEM 524
KI+DFG +K S A GT YIAPEV + G+V +DV+S G+ ++ M
Sbjct: 157 KIADFGYSKASVLHSQPKS---AVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVM 210
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 103
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 104 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 152
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 153 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 205
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 206 GCIMGEMVRHK 216
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH I+H D+KP NI+
Sbjct: 110 LMDANLSQVIQ----MELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEM 524
G ++ EM
Sbjct: 212 GCIMGEM 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 110 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 212 GCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 110
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 111 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 159
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 160 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 212
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 213 GCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 103
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 104 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 152
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 153 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 205
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 206 GCIMGEMVRHK 216
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 141
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 142 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 198
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 199 VSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 235
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 350 VAIKVLNETKGNGEDFINEVASISR-TSHVNIVTLLGFCFEGHRRA------LIYEFVSN 402
VAIK + + K F N I R H N+V L F + + L+ E+V
Sbjct: 67 VAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE 122
Query: 403 GSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE 462
+ +H + Q + ++ + R L Y+H + I H DIKP N+LLD
Sbjct: 123 TV---YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDP 176
Query: 463 DF-CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGM 519
K+ DFG AKI E VS +R Y APE+ FG +Y + D++S G
Sbjct: 177 PSGVLKLIDFGSAKILIAGEPNVSXICSR---YYRAPELI---FGATNYTTNIDIWSTGC 230
Query: 520 MVFEM 524
++ E+
Sbjct: 231 VMAEL 235
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 99 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 158
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 159 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 215
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 216 VSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 252
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI++LL E + +
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 102
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 103 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 151
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 152 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 204
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 205 GCIMGEMVRHK 215
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 135 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 191
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 192 VSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 228
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 135
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 136 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 192
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 193 VSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 229
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 135 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 191
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 192 VSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 127
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 128 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 184
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 185 VSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 221
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 160
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 161 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 217
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 218 VSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 254
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 366 INEVASISRTSHVNIVTLLGF----CFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKL 421
+ E+ + H NI+T+ FE I + + L + I + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQML 109
Query: 422 KWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE--- 478
+ + R ++ LH G N ++H D+KP N+L++ + K+ DFGLA+I +
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 479 -------GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
G++S MT T Y APEV + + S DV+S G ++ E+
Sbjct: 167 ADNSEPTGQQS--GMTEYVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 367 NEVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKW 423
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 63 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 122
Query: 424 EVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRES 482
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 123 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 179
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 180 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
+ VA+K++++T+ N + EV + +H NIV L L+ E+ S G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 405 LEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ + L + ++K + I ++Y H+ I+H D+K N+LLD D
Sbjct: 100 VFDY------LVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADM 150
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG + + + G+ Y APE+F + + DV+S G++++ +
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSP---PYAAPELFQGKKYD-GPEVDVWSLGVILYTL 206
Query: 525 T 525
Sbjct: 207 V 207
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 348 QNVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGH----RRALIYEFVSNG 403
+ VA+KV T+ E+ H NI+ + +G + LI ++ NG
Sbjct: 61 EKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENG 120
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC-----NTRILHFDIKPHNI 458
SL ++ + L + + K+A GL +LH I H D+K NI
Sbjct: 121 SLYDYLK-------STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI 173
Query: 459 LLDEDFCPKISDFGLAK--ICEGRESIVSMTGARGTIGYIAPEV----FCRNFGEVSYKS 512
L+ ++ I+D GLA I + E + GT Y+ PEV RN + +
Sbjct: 174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMA 233
Query: 513 DVYSYGMMVFEM 524
D+YS+G++++E+
Sbjct: 234 DMYSFGLILWEV 245
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
+ VA+K++++T+ N + EV + +H NIV L L+ E+ S G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 405 LEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ + L + ++K + I ++Y H+ I+H D+K N+LLD D
Sbjct: 100 VFDY------LVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADM 150
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG + + + G+ Y APE+F + + DV+S G++++ +
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSP---PYAAPELFQGKKYD-GPEVDVWSLGVILYTL 206
Query: 525 T 525
Sbjct: 207 V 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+AP + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPAIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 367 NEVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKW 423
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 424 EVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRES 482
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 122 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 179 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 110 LMDANLSQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEM 524
G ++ EM
Sbjct: 212 GCIMGEM 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 350 VAIKVLNE-TKGNGEDFI-NEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEK 407
VAIK++++ T G+ I E+ ++ H +I L ++ ++ E+ G L
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD 97
Query: 408 FIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 467
+I + L + V+++ I + Y+H + H D+KP N+L DE K
Sbjct: 98 YIISQDRLSEEET---RVVFR---QIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLK 148
Query: 468 ISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
+ DFGL +G + T G++ Y APE+ + + ++DV+S G++++
Sbjct: 149 LIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPELI-QGKSYLGSEADVWSMGILLY 201
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 368 EVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKWE 424
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 201
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESI 483
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 202 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 258
Query: 484 VSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 259 VSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 295
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 367 NEVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKW 423
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 424 EVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRES 482
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 122 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 179 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 349 NVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEFV 400
NVA+K L+ + + + + E+ + +H NI++LL E + + +
Sbjct: 49 NVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 108
Query: 401 SNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL 460
+ +L + IH +E + + +LY++ GI ++LH + I+H D+KP NI++
Sbjct: 109 MDANLCQVIH----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIVV 157
Query: 461 DEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYG 518
D KI DFGLA+ MT T Y APEV + YK D++S G
Sbjct: 158 KSDCTLKILDFGLARTASTN---FMMTPYVVTRYYRAPEVILG----MGYKENVDIWSVG 210
Query: 519 MMVFEMT 525
++ E+
Sbjct: 211 CIMGELV 217
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NIV LL + H + +LI+E+V+N + +P T+ +++ + + +
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI-----YELLKA 138
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICE-GRESIVSMTGARGTIG 494
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ G+E V +
Sbjct: 139 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---- 191
Query: 495 YIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ PE+ + + Y D++S G M M K
Sbjct: 192 FKGPELLV-DLQDYDYSLDMWSLGCMFAGMIFRK 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 367 NEVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKW 423
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 424 EVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRES 482
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 122 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 179 NVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 367 NEVASISRTSHVNIVTLLGFCFE-GHRRALIYEFVSNGSLEKFIHE--KHPLETNQKLKW 423
E+ + + H NIV L F + G ++ +Y + + + ++ +H Q L
Sbjct: 66 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 125
Query: 424 EVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRES 482
+ + R L Y+H + I H DIKP N+LLD D K+ DFG AK E
Sbjct: 126 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 182
Query: 483 IVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
VS +R Y APE+ FG Y S DV+S G ++ E+
Sbjct: 183 NVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 220
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NIV LL + H + +LI+E+V+N + +P T+ +++ + + +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI-----YELLKA 137
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICE-GRESIVSMTGARGTIG 494
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ G+E V +
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---- 190
Query: 495 YIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ PE+ + + Y D++S G M M K
Sbjct: 191 FKGPELLV-DLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NIV LL + H + +LI+E+V+N + +P T+ +++ + + +
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI-----YELLKA 138
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICE-GRESIVSMTGARGTIG 494
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ G+E V +
Sbjct: 139 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---- 191
Query: 495 YIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ PE+ + + Y D++S G M M K
Sbjct: 192 FKGPELLV-DLQDYDYSLDMWSLGCMFAGMIFRK 224
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 22/179 (12%)
Query: 351 AIKVLNETKGNGEDF--INEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSL-E 406
A K++N K + DF + A I R H NIV L E L+++ V+ G L E
Sbjct: 58 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 117
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---ED 463
+ + E + + +I IA Y H + I+H ++KP N+LL +
Sbjct: 118 DIVAREFYSEADAS---HCIQQILESIA----YCH---SNGIVHRNLKPENLLLASKAKG 167
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
K++DFGLA E+ G GT GY++PEV ++ S D+++ G++++
Sbjct: 168 AAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILY 221
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NIV LL + H + +LI+E+V+N + +P T+ +++ + + +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI-----YELLKA 137
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICE-GRESIVSMTGARGTIG 494
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ G+E V +
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---- 190
Query: 495 YIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ PE+ + + Y D++S G M M K
Sbjct: 191 FKGPELLV-DLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 32/191 (16%)
Query: 348 QNVAIKVLNETKGNG------EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVS 401
Q A+K+++ K ED E + H +IV LL +++EF+
Sbjct: 50 QQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD 109
Query: 402 NGSLEKFIHEKHPLETNQKLKWEVLYKIAVG------IARGLEYLHRGCNTRILHFDIKP 455
L E ++ +Y AV I L Y H + I+H D+KP
Sbjct: 110 GADL--------CFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKP 158
Query: 456 HNILL--DEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYK 511
N+LL E+ P K+ DFG+A I G +V+ G GT ++APEV R +G+
Sbjct: 159 ENVLLASKENSAPVKLGDFGVA-IQLGESGLVA-GGRVGTPHFMAPEVVKREPYGK---P 213
Query: 512 SDVYSYGMMVF 522
DV+ G+++F
Sbjct: 214 VDVWGCGVILF 224
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 22/179 (12%)
Query: 351 AIKVLNETKGNGEDF--INEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSL-E 406
A K++N K + DF + A I R H NIV L E L+++ V+ G L E
Sbjct: 35 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 94
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---ED 463
+ + E + + +I IA Y H + I+H ++KP N+LL +
Sbjct: 95 DIVAREFYSEADAS---HCIQQILESIA----YCH---SNGIVHRNLKPENLLLASKAKG 144
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
K++DFGLA E+ G GT GY++PEV ++ S D+++ G++++
Sbjct: 145 AAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILY 198
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 348 QNVAIKVL---NETKGNGEDFINEVASISRTSHVNIVTLLGFC---FEGHRRA-----LI 396
Q VA+K + NE +G + E+ + H N+V L+ C + R L+
Sbjct: 44 QKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLV 103
Query: 397 YEFVSNGSLEKFIHEKHPLETNQKLKWEV--LYKIAVGIARGLEYLHRGCNTRILHFDIK 454
++F H+ L +N +K+ + + ++ + GL Y+HR +ILH D+K
Sbjct: 104 FDFCE--------HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMK 152
Query: 455 PHNILLDEDFCPKISDFGLAK-ICEGRESIVSMTGAR-GTIGYIAPEVFCRNFGEVSYKS 512
N+L+ D K++DFGLA+ + S + R T+ Y PE+ GE Y
Sbjct: 153 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL---LGERDYGP 209
Query: 513 --DVYSYGMMVFEM 524
D++ G ++ EM
Sbjct: 210 PIDLWGAGCIMAEM 223
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 22/179 (12%)
Query: 351 AIKVLNETKGNGEDF--INEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSL-E 406
A K++N K + DF + A I R H NIV L E L+++ V+ G L E
Sbjct: 34 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 93
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---ED 463
+ + E + + +I IA Y H + I+H ++KP N+LL +
Sbjct: 94 DIVAREFYSEADAS---HCIQQILESIA----YCH---SNGIVHRNLKPENLLLASKAKG 143
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
K++DFGLA E+ G GT GY++PEV ++ S D+++ G++++
Sbjct: 144 AAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILY 197
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 348 QNVAIKVL---NETKGNGEDFINEVASISRTSHVNIVTLLGFC---FEGHRRA-----LI 396
Q VA+K + NE +G + E+ + H N+V L+ C + R L+
Sbjct: 44 QKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 103
Query: 397 YEFVSNGSLEKFIHEKHPLETNQKLKWEV--LYKIAVGIARGLEYLHRGCNTRILHFDIK 454
++F H+ L +N +K+ + + ++ + GL Y+HR +ILH D+K
Sbjct: 104 FDFCE--------HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMK 152
Query: 455 PHNILLDEDFCPKISDFGLAK-ICEGRESIVSMTGAR-GTIGYIAPEVFCRNFGEVSYKS 512
N+L+ D K++DFGLA+ + S + R T+ Y PE+ GE Y
Sbjct: 153 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL---LGERDYGP 209
Query: 513 --DVYSYGMMVFEM 524
D++ G ++ EM
Sbjct: 210 PIDLWGAGCIMAEM 223
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NIV LL + H + +LI+E+V+N + +P T+ +++ + + +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI-----YELLKA 137
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICE-GRESIVSMTGARGTIG 494
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ G+E V +
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---- 190
Query: 495 YIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ PE+ + + Y D++S G M M K
Sbjct: 191 FKGPELLV-DLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
+ VA+K++++T+ N + EV +H NIV L L+ E+ S G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGE 99
Query: 405 L-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
+ + + E + K+ I ++Y H+ I+H D+K N+LLD D
Sbjct: 100 VFDYLVAHGRXKEKEARAKFR-------QIVSAVQYCHQKF---IVHRDLKAENLLLDAD 149
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KI+DFG + + + GA Y APE+F + + DV+S G++++
Sbjct: 150 XNIKIADFGFSNEFTFGNKLDAFCGAP---PYAAPELFQGKKYD-GPEVDVWSLGVILYT 205
Query: 524 MT 525
+
Sbjct: 206 LV 207
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NIV LL + H + +LI+E+V+N + +P T+ +++ + + +
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI-----YELLKA 158
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICE-GRESIVSMTGARGTIG 494
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ G+E V +
Sbjct: 159 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---- 211
Query: 495 YIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ PE+ + + Y D++S G M M K
Sbjct: 212 FKGPELLV-DLQDYDYSLDMWSLGCMFAGMIFRK 244
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NIV LL + H + +LI+E+V+N + +P T+ +++ + + +
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI-----YELLKA 139
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICE-GRESIVSMTGARGTIG 494
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ G+E V +
Sbjct: 140 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---- 192
Query: 495 YIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ PE+ + + Y D++S G M M K
Sbjct: 193 FKGPELLV-DLQDYDYSLDMWSLGCMFAGMIFRK 225
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NIV LL + H + +LI+E+V+N + +P T+ +++ + + +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI-----YELLKA 137
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICE-GRESIVSMTGARGTIG 494
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ G+E V +
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---- 190
Query: 495 YIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ PE+ + + Y D++S G M M K
Sbjct: 191 FKGPELLV-DLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NIV LL + H + +LI+E+V+N + +P T+ +++ + + +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI-----YELLKA 137
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICE-GRESIVSMTGARGTIG 494
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ G+E V +
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---- 190
Query: 495 YIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ PE+ + + Y D++S G M M K
Sbjct: 191 FKGPELLV-DLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NIV LL + H + +LI+E+V+N + +P T+ +++ + + +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYI-----YELLKA 137
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICE-GRESIVSMTGARGTIG 494
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ G+E V +
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY---- 190
Query: 495 YIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
+ PE+ + + Y D++S G M M K
Sbjct: 191 FKGPELLV-DLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +G +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC---- 220
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT Y+APE+ + D ++ G++++EM
Sbjct: 221 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 254
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 380 IVTLLGFCFEGHRRA-LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLE 438
+T L CF+ R + E+V+ G L I + + V Y A IA GL
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----VFY--AAEIAIGLF 456
Query: 439 YLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK--ICEGRESIVSMTGARGTIGYI 496
+L + I++ D+K N++LD + KI+DFG+ K I +G V+ GT YI
Sbjct: 457 FLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFCGTPDYI 509
Query: 497 APEVFCRNFGEVSYKSDVYSYGMMVFEM 524
APE+ + D +++G++++EM
Sbjct: 510 APEIIA--YQPYGKSVDWWAFGVLLYEM 535
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 22/179 (12%)
Query: 351 AIKVLNETKGNGEDF--INEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSL-E 406
A K++N K + DF + A I R H NIV L E L+++ V+ G L E
Sbjct: 35 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 94
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---ED 463
+ + E + + +I IA Y H + I+H ++KP N+LL +
Sbjct: 95 DIVAREFYSEADAS---HCIQQILESIA----YCH---SNGIVHRNLKPENLLLASKAKG 144
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 522
K++DFGLA E+ G GT GY++PEV ++ S D+++ G++++
Sbjct: 145 AAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILY 198
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 348 QNVAIKVL---NETKGNGEDFINEVASISRTSHVNIVTLLGFC---FEGHRRA-----LI 396
Q VA+K + NE +G + E+ + H N+V L+ C + R L+
Sbjct: 44 QKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 103
Query: 397 YEFVSNGSLEKFIHEKHPLETNQKLKWEV--LYKIAVGIARGLEYLHRGCNTRILHFDIK 454
++F H+ L +N +K+ + + ++ + GL Y+HR +ILH D+K
Sbjct: 104 FDFCE--------HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMK 152
Query: 455 PHNILLDEDFCPKISDFGLAK-ICEGRESIVSMTGAR-GTIGYIAPEVFCRNFGEVSYKS 512
N+L+ D K++DFGLA+ + S + R T+ Y PE+ GE Y
Sbjct: 153 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL---LGERDYGP 209
Query: 513 --DVYSYGMMVFEM 524
D++ G ++ EM
Sbjct: 210 PIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 348 QNVAIKVL---NETKGNGEDFINEVASISRTSHVNIVTLLGFC---FEGHRRA-----LI 396
Q VA+K + NE +G + E+ + H N+V L+ C + R L+
Sbjct: 43 QKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 102
Query: 397 YEFVSNGSLEKFIHEKHPLETNQKLKWEV--LYKIAVGIARGLEYLHRGCNTRILHFDIK 454
++F H+ L +N +K+ + + ++ + GL Y+HR +ILH D+K
Sbjct: 103 FDFCE--------HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMK 151
Query: 455 PHNILLDEDFCPKISDFGLAK-ICEGRESIVSMTGAR-GTIGYIAPEVFCRNFGEVSYKS 512
N+L+ D K++DFGLA+ + S + R T+ Y PE+ GE Y
Sbjct: 152 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL---LGERDYGP 208
Query: 513 --DVYSYGMMVFEM 524
D++ G ++ EM
Sbjct: 209 PIDLWGAGCIMAEM 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
+ VA++++++T+ N + EV + +H NIV L L+ E+ S G
Sbjct: 40 KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 405 LEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ + L + ++K + I ++Y H+ I+H D+K N+LLD D
Sbjct: 100 VFDY------LVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADM 150
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG + + + G+ Y APE+F + + DV+S G++++ +
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSP---PYAAPELFQGKKYD-GPEVDVWSLGVILYTL 206
Query: 525 T 525
Sbjct: 207 V 207
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 110 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDCTLKILDFGLARTA---GTSFMMTPEVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEM 524
G ++ EM
Sbjct: 212 GCIMGEM 218
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 351 AIKVLNETKGNGEDFI-NEVASISR-TSHVNIVTLLGFCFEGHRRALIYEFVSNGSLEKF 408
A+K++ + G+ + EV ++ + + NI+ L+ F + R L++E + GS+
Sbjct: 42 AVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAH 101
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD--EDFCP 466
I ++ + ++ +A L++LH I H D+KP NIL + E P
Sbjct: 102 IQKQKHFNEREA------SRVVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSP 152
Query: 467 -KISDFGLAKICEGRESIVSMTGAR-----GTIGYIAP---EVFCRNFGEVSYKSDVYSY 517
KI DF L + S +T G+ Y+AP EVF + D++S
Sbjct: 153 VKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSL 212
Query: 518 GMMVFEM 524
G++++ M
Sbjct: 213 GVVLYIM 219
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A I EYLH + +++ D+KP N+L+D+ +++DFG AK +GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 526
GT +APE+ + D ++ G++++EM
Sbjct: 200 -GTPEALAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 55 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 114
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 115 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 163
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 164 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDLWSV 216
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 217 GCIMGEMVCHK 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 18/182 (9%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
+ VA+K++++T+ N + EV + +H NIV L L+ E+ S G
Sbjct: 33 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 92
Query: 405 LEKFIHEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
+ ++ + E + K+ I ++Y H+ I+H D+K N+LLD D
Sbjct: 93 VFDYLVAHGWMKEKEARAKFR-------QIVSAVQYCHQKF---IVHRDLKAENLLLDAD 142
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE 523
KI+DFG + + + G+ Y APE+F + + DV+S G++++
Sbjct: 143 MNIKIADFGFSNEFTFGNKLDTFCGSP---PYAAPELFQGKKYD-GPEVDVWSLGVILYT 198
Query: 524 MT 525
+
Sbjct: 199 LV 200
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 380 IVTLLGFCFEGHRRA-LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLE 438
+T L CF+ R + E+V+ G L I + + V Y A IA GL
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----VFY--AAEIAIGLF 135
Query: 439 YLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK--ICEGRESIVSMTGARGTIGYI 496
+L + I++ D+K N++LD + KI+DFG+ K I +G V+ GT YI
Sbjct: 136 FLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFCGTPDYI 188
Query: 497 APEVFCRNFGEVSYKSDVYSYGMMVFEM 524
APE+ + D +++G++++EM
Sbjct: 189 APEIIA--YQPYGKSVDWWAFGVLLYEM 214
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 348 QNVAIKVLNETKGNGEDF--INEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
Q A ++N K + D + A I R H NIV L E LI++ V+ G
Sbjct: 37 QEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE 96
Query: 405 L-EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L E + ++ E + + I + LE + ++H ++KP N+LL
Sbjct: 97 LFEDIVAREYYSEADA----------SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASK 146
Query: 464 F---CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYKSDVYSYGM 519
K++DFGLA EG + + G GT GY++PEV ++ +G+ D+++ G+
Sbjct: 147 LKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGK---PVDLWACGV 201
Query: 520 MVF 522
+++
Sbjct: 202 ILY 204
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 18/141 (12%)
Query: 395 LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHR---GCNTR--IL 449
LI + +GSL F+ Q L+ + ++AV A GL +LH G + I
Sbjct: 83 LITHYHEHGSLYDFLQR-------QTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIA 135
Query: 450 HFDIKPHNILLDEDFCPKISDFGLAKI-CEGRESIVSMTGAR-GTIGYIAPEVF---CRN 504
H D K N+L+ + I+D GLA + +G + + R GT Y+APEV R
Sbjct: 136 HRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRT 195
Query: 505 FGEVSYK-SDVYSYGMMVFEM 524
SYK +D++++G++++E+
Sbjct: 196 DCFESYKWTDIWAFGLVLWEI 216
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
+ VA+K++++T+ N + EV + +H NIV L L+ E+ S G
Sbjct: 41 REVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGE 100
Query: 405 LEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ + L + ++K + I ++Y H+ I+H D+K N+LLD D
Sbjct: 101 VFDY------LVAHGRMKEKEARAKFRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDM 151
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG + + + G+ Y APE+F + + DV+S G++++ +
Sbjct: 152 NIKIADFGFSNEFTVGNKLDTFCGSP---PYAAPELFQGKKYD-GPEVDVWSLGVILYTL 207
Query: 525 T 525
Sbjct: 208 V 208
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 52 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 111
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 112 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 160
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ +V R Y APEV + YK D++S
Sbjct: 161 VKSDCTLKILDFGLARTAGTSFMMVPFVVTR---YYRAPEVIL----GMGYKENVDIWSV 213
Query: 518 GMMVFEM 524
G ++ EM
Sbjct: 214 GCIMGEM 220
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 103
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 104 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 152
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 153 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG----MGYKENVDLWSV 205
Query: 518 GMMVFEMTGEK 528
G ++ EM K
Sbjct: 206 GCIMGEMVCHK 216
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 450 HFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVS 509
H D+KP NIL+ D + DFG+A E + + GT+ Y APE F + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTD-EKLTQLGNTVGTLYYXAPERFSES--HAT 213
Query: 510 YKSDVYSYGMMVFE-MTG 526
Y++D+Y+ +++E +TG
Sbjct: 214 YRADIYALTCVLYECLTG 231
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 111 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 159
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 160 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 212
Query: 518 GMMVFEM 524
G ++ EM
Sbjct: 213 GCIMGEM 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 110 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEM 524
G ++ EM
Sbjct: 212 GCIMGEM 218
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 348 QNVAIKVLNETKGNG---EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
+ VA++++++T+ N + EV + +H NIV L L+ E+ S G
Sbjct: 40 KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 405 LEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDF 464
+ + L + ++K + I ++Y H+ I+H D+K N+LLD D
Sbjct: 100 VFDY------LVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADM 150
Query: 465 CPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
KI+DFG + + G+ Y APE+F + + DV+S G++++ +
Sbjct: 151 NIKIADFGFSNEFTFGNKLDEFCGSP---PYAAPELFQGKKYD-GPEVDVWSLGVILYTL 206
Query: 525 T 525
Sbjct: 207 V 207
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 110 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSY 517
+ D KI DFGLA+ + MT T Y APEV + YK D++S
Sbjct: 159 VKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVIL----GMGYKENVDIWSV 211
Query: 518 GMMVFEM 524
G ++ EM
Sbjct: 212 GCIMGEM 218
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 26/186 (13%)
Query: 349 NVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEFV 400
NVA+K L+ + + + + E+ + +H NI++LL E + + +
Sbjct: 51 NVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 401 SNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL 460
+ +L + IH +E + + +LY++ GI ++LH + I+H D+KP NI++
Sbjct: 111 MDANLCQVIH----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIVV 159
Query: 461 DEDFCPKISDFGLAKI-CEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGM 519
D KI DFGLA+ C MT T Y APEV G + D++S G
Sbjct: 160 KSDCTLKILDFGLARTACTN----FMMTPYVVTRYYRAPEVIL-GMGYAA-NVDIWSVGC 213
Query: 520 MVFEMT 525
++ E+
Sbjct: 214 IMGELV 219
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 366 INEVASISRTSHVNIVTLLGF----CFEGHRRALIYEFVSNGSLEKFIHEKHPLETNQKL 421
+ E+ + H NI+T+ FE I + + L + I + Q L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQML 109
Query: 422 KWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICE--- 478
+ + R ++ LH G N ++H D+KP N+L++ + K+ DFGLA+I +
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 479 -------GRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
G++S M T Y APEV + + S DV+S G ++ E+
Sbjct: 167 ADNSEPTGQQS--GMVEFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 27/183 (14%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKF 408
VA+K + + E+ E+ + H NIV A++ E+ S G L E+
Sbjct: 46 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 105
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-- 466
+ E + ++ L G+ Y H ++ H D+K N LLD P
Sbjct: 106 CNAGRFSEDEARFFFQQLIS-------GVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 155
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIG---YIAPEVFCRNF--GEVSYKSDVYSYGMMV 521
KI DFG +K S V + + T+G YIAPEV + G+V +DV+S G+ +
Sbjct: 156 KICDFGYSK------SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTL 206
Query: 522 FEM 524
+ M
Sbjct: 207 YVM 209
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 23/180 (12%)
Query: 351 AIKVLNETKGNGEDF--INEVASISRT-SHVNIVTLLGFCFEGHRRALIYEFVSNGSL-E 406
A K++N K + D + A I R H NIV L E L+++ V+ G L E
Sbjct: 33 AAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE 92
Query: 407 KFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---ED 463
+ ++ E + + I + LE + ++H D+KP N+LL +
Sbjct: 93 DIVAREYYSEADA----------SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKG 142
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYKSDVYSYGMMVF 522
K++DFGLA +G + + G GT GY++PEV + +G+ D+++ G++++
Sbjct: 143 AAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEVLRKEAYGK---PVDIWACGVILY 197
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 361 NGEDFIN-EVASISRTSHVNIVTLLGFCF--EGHRRALIYEFVSNGSLEKFIHEKHPLET 417
NGE + E+ + R H N++ L+ + E + ++ E+ G E L++
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEM-------LDS 100
Query: 418 NQKLKWEV--LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK 475
+ ++ V + + GLEYLH + I+H DIKP N+LL KIS G+A+
Sbjct: 101 VPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157
Query: 476 ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
+ + ++G+ + PE+ +K D++S G+ ++ +T
Sbjct: 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNIT 207
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 40/197 (20%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 110 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGE------VSYKS- 512
+ D KI DFGLA+ GT + PEV R + + YK
Sbjct: 159 VKSDCTLKILDFGLARTA-------------GTSFMMEPEVVTRYYRAPEVILGMGYKEN 205
Query: 513 -DVYSYGMMVFEMTGEK 528
D++S G ++ EM K
Sbjct: 206 VDIWSVGCIMGEMVCHK 222
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 21/183 (11%)
Query: 348 QNVAIKVLNETKGN---GEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGS 404
Q VAIK E++ + + + E+ + + H N+V LL R L++E+ +
Sbjct: 29 QIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTV 88
Query: 405 LEKFIHEKHPLETNQKLKWEVLYK-IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDED 463
L H L+ Q+ E L K I + + + H+ +H D+KP NIL+ +
Sbjct: 89 L-------HELDRYQRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKH 138
Query: 464 FCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMV 521
K+ DFG A++ G A T Y +PE+ G+ Y DV++ G +
Sbjct: 139 SVIKLCDFGFARLLTGPSDYYDDEVA--TRWYRSPELLV---GDTQYGPPVDVWAIGCVF 193
Query: 522 FEM 524
E+
Sbjct: 194 AEL 196
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 430 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA 489
A IA L YLH + I++ D+KP NILLD ++DFGL K E E + +
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTF 199
Query: 490 RGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
GT Y+APEV + D + G +++EM
Sbjct: 200 CGTPEYLAPEVLHKQ--PYDRTVDWWCLGAVLYEM 232
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 425 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA-KICEGRESI 483
+L K+ V I + L YL ++H D+KP NILLDE K+ DFG++ ++ + +
Sbjct: 125 ILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD 182
Query: 484 VSMTGARGTIGYIAPEVF---CRNFGEVSYKSDVYSYGMMVFEM-TGEKNNANVAVD 536
S G Y+APE + ++DV+S G+ + E+ TG+ N D
Sbjct: 183 RSA----GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 40/197 (20%)
Query: 348 QNVAIKVLN---ETKGNGEDFINEVASISRTSHVNIVTLLGF-----CFEGHRRALIYEF 399
+NVAIK L+ + + + + E+ + +H NI+ LL E + I
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 400 VSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 459
+ + +L + I +E + + +LY++ GI ++LH + I+H D+KP NI+
Sbjct: 110 LMDANLCQVIQ----MELDHERMSYLLYQMLCGI----KHLH---SAGIIHRDLKPSNIV 158
Query: 460 LDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGE------VSYKS- 512
+ D KI DFGLA+ GT + PEV R + + YK
Sbjct: 159 VKSDCTLKILDFGLARTA-------------GTSFMMEPEVVTRYYRAPEVILGMGYKEN 205
Query: 513 -DVYSYGMMVFEMTGEK 528
D++S G ++ EM K
Sbjct: 206 VDLWSVGCIMGEMVCHK 222
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 29/183 (15%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E +G E+ S H NI+ + + + R L+ EF G L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
K L+ + + + +A L Y H +++H DIKP N+L+
Sbjct: 102 YK------ELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGE 152
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ + E K D++ G++
Sbjct: 153 LKIADFGW--------SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE---KVDLWCAGVL 201
Query: 521 VFE 523
+E
Sbjct: 202 CYE 204
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 402 NGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL- 460
NGS+ F + L+ Q+ K ++ I I L YLH N I H DIKP N L
Sbjct: 151 NGSIHGF---RESLDFVQREK--LISNIMRQIFSALHYLH---NQGICHRDIKPENFLFS 202
Query: 461 -DEDFCPKISDFGLA----KICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVY 515
++ F K+ DFGL+ K+ G MT GT ++APEV K D +
Sbjct: 203 TNKSFEIKLVDFGLSKEFYKLNNG--EYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260
Query: 516 SYGMMV 521
S G+++
Sbjct: 261 SAGVLL 266
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 29/183 (15%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E +G E+ S H NI+ + + + R L+ EF G L
Sbjct: 43 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 102
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
K L+ + + + +A L Y H +++H DIKP N+L+
Sbjct: 103 YK------ELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGE 153
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ + E K D++ G++
Sbjct: 154 LKIADFGW--------SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE---KVDLWCAGVL 202
Query: 521 VFE 523
+E
Sbjct: 203 CYE 205
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 29/183 (15%)
Query: 350 VAIKVLN----ETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
+A+KVL E +G E+ S H NI+ + + + R L+ EF G L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
K L+ + + + +A L Y H +++H DIKP N+L+
Sbjct: 102 YK------ELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGE 152
Query: 466 PKISDFGLAKICEGRESIVSMTGAR----GTIGYIAPEVF-CRNFGEVSYKSDVYSYGMM 520
KI+DFG S+ + + R GT+ Y+ PE+ + E K D++ G++
Sbjct: 153 LKIADFGW--------SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE---KVDLWCAGVL 201
Query: 521 VFE 523
+E
Sbjct: 202 CYE 204
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 32/191 (16%)
Query: 348 QNVAIKVLNETKGNG------EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVS 401
Q A+K+++ K ED E + H +IV LL +++EF+
Sbjct: 50 QQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD 109
Query: 402 NGSLEKFIHEKHPLETNQKLKWEVLYKIAVG------IARGLEYLHRGCNTRILHFDIKP 455
L E ++ +Y AV I L Y H + I+H D+KP
Sbjct: 110 GADL--------CFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKP 158
Query: 456 HNILL--DEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYK 511
H +LL E+ P K+ FG+A I G +V+ G GT ++APEV R +G+
Sbjct: 159 HCVLLASKENSAPVKLGGFGVA-IQLGESGLVA-GGRVGTPHFMAPEVVKREPYGK---P 213
Query: 512 SDVYSYGMMVF 522
DV+ G+++F
Sbjct: 214 VDVWGCGVILF 224
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 32/191 (16%)
Query: 348 QNVAIKVLNETKGNG------EDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVS 401
Q A+K+++ K ED E + H +IV LL +++EF+
Sbjct: 52 QQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD 111
Query: 402 NGSLEKFIHEKHPLETNQKLKWEVLYKIAVG------IARGLEYLHRGCNTRILHFDIKP 455
L E ++ +Y AV I L Y H + I+H D+KP
Sbjct: 112 GADL--------CFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKP 160
Query: 456 HNILL--DEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRN-FGEVSYK 511
H +LL E+ P K+ FG+A I G +V+ G GT ++APEV R +G+
Sbjct: 161 HCVLLASKENSAPVKLGGFGVA-IQLGESGLVA-GGRVGTPHFMAPEVVKREPYGK---P 215
Query: 512 SDVYSYGMMVF 522
DV+ G+++F
Sbjct: 216 VDVWGCGVILF 226
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 350 VAIKVL----NETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
VA+KVL E +G E+ + H NI+ L + ++ R LI E+ G L
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL 110
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
K L+ + + I +A L Y H +++H DIKP N+LL
Sbjct: 111 YK------ELQKSCTFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGE 161
Query: 466 PKISDFGLAKICEG--RESIVSMTGARGTIGYIAPEVF-CRNFGEVSYKSDVYSYGMMVF 522
KI+DFG + R+++ GT+ Y+ PE+ R E K D++ G++ +
Sbjct: 162 LKIADFGWSVHAPSLRRKTMC------GTLDYLPPEMIEGRMHNE---KVDLWCIGVLCY 212
Query: 523 EM 524
E+
Sbjct: 213 EL 214
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKF 408
VA+K + + + E+ + H NIV A++ E+ S G L E+
Sbjct: 47 VAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-- 466
+ E + ++ L G+ Y H ++ H D+K N LLD P
Sbjct: 107 CNAGRFSEDEARFFFQQLIS-------GVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 156
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIG---YIAPEVFCRNF--GEVSYKSDVYSYGMMV 521
KI DFG +K S V + + T+G YIAPEV + G+V +DV+S G+ +
Sbjct: 157 KICDFGYSK------SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTL 207
Query: 522 FEM 524
+ M
Sbjct: 208 YVM 210
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 22/188 (11%)
Query: 348 QNVAIKVLNETKGNGEDFI-NEVASISR-TSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
Q A+K++ + G+ + EV + + H N++ L+ F E R L++E + GS+
Sbjct: 39 QEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE--D 463
IH++ +L+ V+ + +A L++LH N I H D+KP NIL +
Sbjct: 99 LSHIHKRRHF---NELEASVVVQ---DVASALDFLH---NKGIAHRDLKPENILCEHPNQ 149
Query: 464 FCP-KISDFGLAKICE--GRESIVS---MTGARGTIGYIAPEV---FCRNFGEVSYKSDV 514
P KI DFGL + G S +S + G+ Y+APEV F + D+
Sbjct: 150 VSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209
Query: 515 YSYGMMVF 522
+S G++++
Sbjct: 210 WSLGVILY 217
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 30/146 (20%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEF-VSNGSLEKFIHEKHPLETNQKLKWE-----VLYKIA 430
H N++ +C E R L + N +L+ + K+ + N KL+ E +L +IA
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 431 VGIARGLEYLHRGCNTRILHFDIKPHNILLD-------------EDFCPKISDFGL-AKI 476
G+A +LH + +I+H D+KP NIL+ E+ ISDFGL K+
Sbjct: 126 SGVA----HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 477 CEGRESI-VSMTGARGTIGYIAPEVF 501
G+ S ++ GT G+ APE+
Sbjct: 179 DSGQSSFRTNLNNPSGTSGWRAPELL 204
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 395 LIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVG-IARGLEYLHRGCNTRILHFDI 453
LI ++++ G L + ++ ++ +I VG I LE+LH+ I++ DI
Sbjct: 136 LILDYINGGELFTHLSQRERFTEHE-------VQIYVGEIVLALEHLHK---LGIIYRDI 185
Query: 454 KPHNILLDEDFCPKISDFGLAK--ICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYK 511
K NILLD + ++DFGL+K + + E GTI Y+AP++
Sbjct: 186 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC---GTIEYMAPDIVRGGDSGHDKA 242
Query: 512 SDVYSYGMMVFEMT---------GEKNN 530
D +S G++++E+ GEKN+
Sbjct: 243 VDWWSLGVLMYELLTGASPFTVDGEKNS 270
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 31/168 (18%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEF-VSNGSLEKFIHEKHPLETNQKLKWE-----VLYKIA 430
H N++ +C E R L + N +L+ + K+ + N KL+ E +L +IA
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 431 VGIARGLEYLHRGCNTRILHFDIKPHNILLD-------------EDFCPKISDFGLAKIC 477
G+A +LH + +I+H D+KP NIL+ E+ ISDFGL K
Sbjct: 144 SGVA----HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 478 EGRESIV--SMTGARGTIGYIAPEVFCRNFGEVSYKS-DVYSYGMMVF 522
+ + ++ GT G+ APE+ + +S D++S G + +
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 433 IARGLEYLHRGCNTRILHFDIKPHNILLD-EDFCPKISDFGLAKICE 478
+ RGL+Y+H + +LH D+KP N+ ++ ED KI DFGLA+I +
Sbjct: 129 LLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD 172
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 31/168 (18%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEF-VSNGSLEKFIHEKHPLETNQKLKWE-----VLYKIA 430
H N++ +C E R L + N +L+ + K+ + N KL+ E +L +IA
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 431 VGIARGLEYLHRGCNTRILHFDIKPHNILLD-------------EDFCPKISDFGLAKIC 477
G+A +LH + +I+H D+KP NIL+ E+ ISDFGL K
Sbjct: 144 SGVA----HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 478 EGRESIV--SMTGARGTIGYIAPEVFCRNFGEVSYKS-DVYSYGMMVF 522
+ + ++ GT G+ APE+ + +S D++S G + +
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 429 IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFG-LAKICEGRESIVSMT 487
IA+ L Y+HR DIKP NIL+D + +++DFG K+ E + V +
Sbjct: 186 IAIDSVHQLHYVHR---------DIKPDNILMDMNGHIRLADFGSCLKLME--DGTVQSS 234
Query: 488 GARGTIGYIAPEVF-CRNFGEVSY--KSDVYSYGMMVFEM 524
A GT YI+PE+ G+ Y + D +S G+ ++EM
Sbjct: 235 VAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEM 274
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 13/113 (11%)
Query: 424 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA +
Sbjct: 126 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 185
Query: 479 GRESIVSMTGAR--GTIGYIAPEVF-----CRNFGEVSYKSDVYSYGMMVFEM 524
+ + GT Y+APEV ++F E ++D+Y+ G++ +E+
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 13/113 (11%)
Query: 424 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA +
Sbjct: 139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198
Query: 479 GRESIVSMTGAR--GTIGYIAPEVF-----CRNFGEVSYKSDVYSYGMMVFEM 524
+ + GT Y+APEV ++F E ++D+Y+ G++ +E+
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEI 250
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 424 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA +
Sbjct: 101 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 160
Query: 479 GRESIVSMTGAR--GTIGYIAPEVF-----CRNFGEVSYKSDVYSYGMMVFEMT 525
+ + GT Y+APEV ++F E ++D+Y+ G++ +E+
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEIA 213
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKF 408
VA+K + + E+ E+ + H NIV A++ E+ S G L E+
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-- 466
+ E + ++ L G+ Y H ++ H D+K N LLD P
Sbjct: 107 CNAGRFSEDEARFFFQQLIS-------GVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 156
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIG---YIAPEVFCRNF--GEVSYKSDVYSYGMMV 521
KI FG +K S V + + T+G YIAPEV + G+V +DV+S G+ +
Sbjct: 157 KICAFGYSK------SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTL 207
Query: 522 FEM 524
+ M
Sbjct: 208 YVM 210
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 424 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA +
Sbjct: 106 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 165
Query: 479 GRESIVSMTGAR--GTIGYIAPEVF-----CRNFGEVSYKSDVYSYGMMVFEMT 525
+ + GT Y+APEV ++F E ++D+Y+ G++ +E+
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEIA 218
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 424 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA +
Sbjct: 100 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159
Query: 479 GRESIVSMTGAR--GTIGYIAPEVF-----CRNFGEVSYKSDVYSYGMMVFEMT 525
+ + GT Y+APEV ++F E ++D+Y+ G++ +E+
Sbjct: 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEIA 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 424 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICE 478
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA +
Sbjct: 103 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 162
Query: 479 GRESIVSMTGAR--GTIGYIAPEVF-----CRNFGEVSYKSDVYSYGMMVFEMT 525
+ + GT Y+APEV ++F E ++D+Y+ G++ +E+
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF-ESFKRADIYAMGLVFWEIA 215
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 30/146 (20%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEF-VSNGSLEKFIHEKHPLETNQKLKWE-----VLYKIA 430
H N++ +C E R L + N +L+ + K+ + N KL+ E +L +IA
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 431 VGIARGLEYLHRGCNTRILHFDIKPHNILLD-------------EDFCPKISDFGLAKIC 477
G+A +LH + +I+H D+KP NIL+ E+ ISDFGL K
Sbjct: 126 SGVA----HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 478 EGRESIV--SMTGARGTIGYIAPEVF 501
+ + ++ GT G+ APE+
Sbjct: 179 DSGQXXFRXNLNNPSGTSGWRAPELL 204
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 350 VAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKF 408
VA+K + + E+ E+ + H NIV A++ E+ S G L E+
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 409 IHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-- 466
+ E + ++ L G+ Y H ++ H D+K N LLD P
Sbjct: 107 CNAGRFSEDEARFFFQQLIS-------GVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 156
Query: 467 KISDFGLAKICEGRESIVSMTGARGTIG---YIAPEVFCRNF--GEVSYKSDVYSYGMMV 521
KI FG +K S V + + T+G YIAPEV + G+V +DV+S G+ +
Sbjct: 157 KICAFGYSK------SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTL 207
Query: 522 FEM 524
+ M
Sbjct: 208 YVM 210
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 26/197 (13%)
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
LE +H I+H D+KP N L+ D K+ DFG+A + + V GT+ Y+
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 497 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGEK----------NNANVAVDR 537
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 235
Query: 538 SSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWC-IQTNPSDRPSMNRVV 596
+ EI FP K L +D+ ++ + + + +L + IQT+P ++ +
Sbjct: 236 NHEIEFPDIPEKDL---QDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTE 292
Query: 597 EM--LEGSLDSLQIPPR 611
EM + G L L + PR
Sbjct: 293 EMKYVLGQLVGLNLVPR 309
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 429 IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTG 488
+A+ L Y+HR DIKP N+LLD + +++DFG + + + V +
Sbjct: 202 LAIDSIHQLHYVHR---------DIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSV 251
Query: 489 ARGTIGYIAPEVFCR---NFGEVSYKSDVYSYGMMVFEM 524
A GT YI+PE+ G+ + D +S G+ ++EM
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 290
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 429 IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTG 488
+A+ L Y+HR DIKP N+LLD + +++DFG + + + V +
Sbjct: 186 LAIDSIHQLHYVHR---------DIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSV 235
Query: 489 ARGTIGYIAPEVFCR---NFGEVSYKSDVYSYGMMVFEM 524
A GT YI+PE+ G+ + D +S G+ ++EM
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 274
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 448 ILHFDIKPHNILLDE-DFCPKISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFG 506
+ H DIKPHN+L++E D K+ DFG AK E V+ +R Y APE+ FG
Sbjct: 152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR---YYRAPELI---FG 205
Query: 507 EVSYKS--DVYSYGMMVFEM 524
Y + D++S G + EM
Sbjct: 206 NQHYTTAVDIWSVGCIFAEM 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
LE +H I+H D+KP N L+ D K+ DFG+A + + V GT+ Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 497 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGEK----------NNANVAVDR 537
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283
Query: 538 SSEIYFPHWVYKRLE 552
+ EI FP K L+
Sbjct: 284 NHEIEFPDIPEKDLQ 298
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 44/205 (21%)
Query: 365 FINEVASISRTSHVNIVTLLGFCF----EGHRRALIYEFVSNGSLEKFIHEKHPLETNQK 420
+ E+A ++R +H ++V +L E + +++ +K + P+ +
Sbjct: 99 ILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLF--RTPVYLTEL 156
Query: 421 LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGR 480
+LY + VG+ +Y+H ILH D+KP N L+++D K+ DFGLA+ +
Sbjct: 157 HIKTLLYNLLVGV----KYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209
Query: 481 ESIVS-------------------------MTGARGTIGYIAPEVFC--RNFGEVSYKSD 513
E+ S +TG T Y APE+ N+ E D
Sbjct: 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA---ID 266
Query: 514 VYSYGMMVFEMTGE-KNNANVAVDR 537
V+S G + E+ K N DR
Sbjct: 267 VWSIGCIFAELLNMIKENVAYHADR 291
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
LE +H I+H D+KP N L+ D K+ DFG+A + + V GT+ Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 497 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGEK----------NNANVAVDR 537
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283
Query: 538 SSEIYFPHWVYKRLE 552
+ EI FP K L+
Sbjct: 284 NHEIEFPDIPEKDLQ 298
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
LE +H I+H D+KP N L+ + K+ DFG+A + + V GT+ Y+
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 497 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGEK----------NNANVAVDR 537
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 239
Query: 538 SSEIYFPHWVYKRLE 552
+ EI FP K L+
Sbjct: 240 NHEIEFPDIPEKDLQ 254
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 143
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+L+D + ++ D+GLA+ + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 199
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 200 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 229
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 20/127 (15%)
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
LE +H I+H D+KP N L+ D K+ DFG+A + + V GT+ Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 497 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGEK----------NNANVAVDR 537
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 255
Query: 538 SSEIYFP 544
+ EI FP
Sbjct: 256 NHEIEFP 262
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 22/188 (11%)
Query: 348 QNVAIKVLNETKGNGEDFI-NEVASISR-TSHVNIVTLLGFCFEGHRRALIYEFVSNGSL 405
Q A+K++ + G+ + EV + + H N++ L+ F E R L++E + GS+
Sbjct: 39 QEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE--D 463
IH++ +L+ V+ + +A L++LH N I H D+KP NIL +
Sbjct: 99 LSHIHKRRHF---NELEASVVVQ---DVASALDFLH---NKGIAHRDLKPENILCEHPNQ 149
Query: 464 FCP-KISDFGLAKICE--GRESIVS---MTGARGTIGYIAPEV---FCRNFGEVSYKSDV 514
P KI DF L + G S +S + G+ Y+APEV F + D+
Sbjct: 150 VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209
Query: 515 YSYGMMVF 522
+S G++++
Sbjct: 210 WSLGVILY 217
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 18/152 (11%)
Query: 377 HVNIVTLLGFCFEGHRRALIYEFVSNGSL-EKFIHEKHPLETNQKLKWEVLYKIAVGIAR 435
H NIV L + L+ E ++ G L E+ +KH ET E Y I +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET------EASY-IMRKLVS 117
Query: 436 GLEYLHRGCNTRILHFDIKPHNILL---DEDFCPKISDFGLAKICEGRESIVSMTGARGT 492
+ ++H + ++H D+KP N+L +++ KI DFG A++ + T
Sbjct: 118 AVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKTPCFT 172
Query: 493 IGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
+ Y APE+ +N + S D++S G++++ M
Sbjct: 173 LHYAAPELLNQNGYDES--CDLWSLGVILYTM 202
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 20/127 (15%)
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
LE +H I+H D+KP N L+ D K+ DFG+A + + V GT+ Y+
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 497 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGEK----------NNANVAVDR 537
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 236
Query: 538 SSEIYFP 544
+ EI FP
Sbjct: 237 NHEIEFP 243
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 20/127 (15%)
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGARGTIGYI 496
LE +H I+H D+KP N L+ D K+ DFG+A + V GT+ Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 497 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGEK----------NNANVAVDR 537
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 255
Query: 538 SSEIYFP 544
+ EI FP
Sbjct: 256 NHEIEFP 262
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 143
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 199
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 200 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 229
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 348 QNVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRR--ALIYEFVSNGSL 405
+ V +K+L K N ++ R NI+TL + R AL++E V+N
Sbjct: 63 EKVVVKILKPVKKNKIKREIKILENLRGG-PNIITLADIVKDPVSRTPALVFEHVNNTDF 121
Query: 406 EKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFC 465
++ + T+ +++ +Y+I + L+Y H + I+H D+KPHN+++D +
Sbjct: 122 KQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDVKPHNVMIDHEHR 169
Query: 466 P-KISDFGLAKICEGRESIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 524
++ D+GLA+ + +R G PE+ ++ Y D++S G M+ M
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSLDMWSLGCMLASM 225
Query: 525 TGEK 528
K
Sbjct: 226 IFRK 229
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 143
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 199
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 200 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 229
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 143
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 199
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 200 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 229
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 143
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 199
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 200 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 229
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 143
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 199
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 200 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 229
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 142
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 143 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 198
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 199 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 228
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 143
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 199
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 200 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 229
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 143
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 199
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 200 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 229
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 143
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 199
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 200 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 229
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 141
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 142 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 197
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 198 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 227
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 148
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 149 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 204
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 205 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 234
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ + T+ +++ +Y+I +
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KA 142
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 143 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 198
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 199 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 228
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICEGRESIVSMTGA----RGT 492
L +LH + ++H D+KP NI L K+ DFGL + E + GA G
Sbjct: 170 LAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVE-----LGTAGAGEVQEGD 219
Query: 493 IGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 525
Y+APE+ ++G +DV+S G+ + E+
Sbjct: 220 PRYMAPELLQGSYGTA---ADVFSLGLTILEVA 249
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 379 NIVTLLGFCFEGHRR--ALIYEFVSNGSLEKFIHEKHPLETNQKLKWEVLYKIAVGIARG 436
NI+TL + R AL++E V+N ++ Q L + I +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL---------RQTLTDYDIRFYMYEILKA 143
Query: 437 LEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICEGRESIVSMTGARGTIGY 495
L+Y H + I+H D+KPHN+++D + ++ D+GLA+ + +R G
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG- 199
Query: 496 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGEK 528
PE+ ++ Y D++S G M+ M K
Sbjct: 200 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRK 229
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 428 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICEGRE 481
+I+ + GL+Y+HR C I+H DIKP N+L++ P KI+D G A C E
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE 190
Query: 482 SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-TGE 527
T + T Y +PEV +D++S ++FE+ TG+
Sbjct: 191 ---HYTNSIQTREYRSPEVLLG--APWGCGADIWSTACLIFELITGD 232
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 428 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICEGRE 481
+I+ + GL+Y+HR C I+H DIKP N+L++ P KI+D G A C E
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE 190
Query: 482 SIVSMTGARGTIGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-TGE 527
T + T Y +PEV +D++S ++FE+ TG+
Sbjct: 191 ---HYTNSIQTREYRSPEVLLG--APWGCGADIWSTACLIFELITGD 232
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 348 QNVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA----LIYEFVSNG 403
+NVA+K+ + E+ + H NI+ + + LI + G
Sbjct: 32 ENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMG 91
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNI 458
SL ++ + L+T L+ I + IA GL +LH G + I H D+K NI
Sbjct: 92 SLYDYL-QLTTLDTVSCLR------IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 144
Query: 459 LLDEDFCPKISDFGLAKICEGRESIVSMTG--ARGTIGYIAPEVFCRNFGEV----SYKS 512
L+ ++ I+D GLA + + + + GT Y+APEV +V SYK
Sbjct: 145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI-QVDCFDSYKR 203
Query: 513 -DVYSYGMMVFEMTGEKNNANVAVDRSSEIY 542
D++++G++++E+ + + D Y
Sbjct: 204 VDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 348 QNVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA----LIYEFVSNG 403
+NVA+K+ + E+ + H NI+ + + LI + G
Sbjct: 32 ENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMG 91
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNI 458
SL ++ + L+T L+ I + IA GL +LH G + I H D+K NI
Sbjct: 92 SLYDYL-QLTTLDTVSCLR------IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 144
Query: 459 LLDEDFCPKISDFGLAKICEGRESIVSMTG--ARGTIGYIAPEVFCRNFGEV----SYKS 512
L+ ++ I+D GLA + + + + GT Y+APEV +V SYK
Sbjct: 145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI-QVDCFDSYKR 203
Query: 513 -DVYSYGMMVFEMTGEKNNANVAVDRSSEIY 542
D++++G++++E+ + + D Y
Sbjct: 204 VDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 429 IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK------------- 475
+ + + ++YLH G +LH D+KP NILL+ + K++DFGL++
Sbjct: 114 VVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 476 --ICEGRESIVS----MTGARGTIGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 524
I E E+ +T T Y APE+ G Y D++S G ++ E+
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEIL---LGSTKYTKGIDMWSLGCILGEI 224
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 24/193 (12%)
Query: 348 QNVAIKVLNETKGNGEDFINEVASISRTSHVNIVTLLGFCFEGHRRA----LIYEFVSNG 403
+NVA+K+ + E+ + H NI+ + + LI + G
Sbjct: 61 ENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMG 120
Query: 404 SLEKFIHEKHPLETNQKLKWEVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNI 458
SL ++ + L+T L+ I + IA GL +LH G + I H D+K NI
Sbjct: 121 SLYDYL-QLTTLDTVSCLR------IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 173
Query: 459 LLDEDFCPKISDFGLAKICEGRESIVSMTG--ARGTIGYIAPEVFCRNFGEV----SYKS 512
L+ ++ I+D GLA + + + + GT Y+APEV +V SYK
Sbjct: 174 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI-QVDCFDSYKR 232
Query: 513 -DVYSYGMMVFEM 524
D++++G++++E+
Sbjct: 233 VDIWAFGLVLWEV 245
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,142,791
Number of Sequences: 62578
Number of extensions: 736763
Number of successful extensions: 3342
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 288
Number of HSP's that attempted gapping in prelim test: 1550
Number of HSP's gapped (non-prelim): 1129
length of query: 638
length of database: 14,973,337
effective HSP length: 105
effective length of query: 533
effective length of database: 8,402,647
effective search space: 4478610851
effective search space used: 4478610851
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)