BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>006621
MWLTCLASAYRTACTIVGSITFYGPSSLRGQVTFPAFSYVTVILIVTDATLGDTLHGCWL
ALYATVQSIGPALLTMWLIGPARLTTGTTALAVAIAAFFVALPEGTHLVAKRIALGQIVL
TYVMGFVNGEHSGAVMLPVRVAASTAIGVLACVLALFLPYPRLACYEVKWNYKQLADNAS
ERPRLYVKALCAEDKSTALASISLAKSLTKSGTKHIQNIKRYQESMKWEIPFKFLRSNYV
KPVKKFQYLEIPLRGMEMAEVLEELTCLTIKKVKSYQILCNSMSVPESNEECSLKNFRTI
PTISQNLPFFFFLFCMKLLNCPMPKTDGSNKSCEEHVLSFKEAWTSWVCKDSPSPSVLPR
QERQLSKVANVKAQGTVLGTVYGVLGCFLFEKLLPIRFLFLFPWFIFTSFLRHGRMYGQG
GGISAVIGAVLILGRKSLGPPEEFAIARIVETFIGLTCTIIGELLFQSTRASTLAKSQLS
KSLGTLHDCISSMTLRASQASLLHKQKRLKMHVNELGTLIGEADVEPNFGFLPFHSACYS
KLLVSLVKMVHLLHFCSYSIGFLEQESQKIDKASWKEDVQKLDGDVKLVKEMACSSIKCF
NDDITTIKSLAILEKELERKKINQWDFGQMGEVLYLQC

High Scoring Gene Products

Symbol, full name Information P value
AT2G28780 protein from Arabidopsis thaliana 3.4e-147

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  006621
        (638 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2053200 - symbol:AT2G28780 species:3702 "Arabi...   718  3.4e-147  3
TAIR|locus:2074889 - symbol:AT3G09450 species:3702 "Arabi...   440  1.0e-78   2


>TAIR|locus:2053200 [details] [associations]
            symbol:AT2G28780 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009734 "auxin mediated
            signaling pathway" evidence=RCA] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:BT004090 EMBL:BT008605
            IPI:IPI00533863 RefSeq:NP_180444.2 UniGene:At.27789
            ProteinModelPortal:Q84W96 PaxDb:Q84W96 PRIDE:Q84W96
            EnsemblPlants:AT2G28780.1 GeneID:817427 KEGG:ath:AT2G28780
            TAIR:At2g28780 eggNOG:NOG289418 HOGENOM:HOG000239132
            InParanoid:Q84W96 OMA:CSIMVEL PhylomeDB:Q84W96
            ProtClustDB:CLSN2918120 Genevestigator:Q84W96 Uniprot:Q84W96
        Length = 796

 Score = 718 (257.8 bits), Expect = 3.4e-147, Sum P(3) = 3.4e-147
 Identities = 150/264 (56%), Positives = 181/264 (68%)

Query:     1 MWLTCLASAYRTA--CTIVGSITFYGPSSLRGQVTFPAFSYVTVILIVTDATLGDTLHGC 58
             MW TCLASA+RTA  CTIVGS T YGP  +   V FPAFSYVTVILI+TDATLGDTL GC
Sbjct:    10 MWRTCLASAFRTALACTIVGSATLYGPEWINRHVAFPAFSYVTVILIITDATLGDTLRGC 69

Query:    59 WLALYATVQSIGPALLTMWLIGPXXXXXXXXXXXXXXXXXXXXLPEG-THLVAKRIALGQ 117
             WLALYAT QS+GPA++T+ LI P                    LP   THLVAKRIALGQ
Sbjct:    70 WLALYATCQSVGPAIVTLKLIRPARLTAETTALAAALAAFVVVLPNSSTHLVAKRIALGQ 129

Query:   118 IVLTYVMGFVNGEHSGAVMLPVRVAASTAIGVLACVLALFLPYPRLACYEVKWNYKQLAD 177
             IVL YV+G++ G  +  VM P++VAASTA+GV+ACVLAL +P PRLA  EVK + K+L  
Sbjct:   130 IVLIYVIGYIKGAKTDPVMHPLQVAASTALGVVACVLALLVPLPRLATCEVKQSCKELGQ 189

Query:   178 NASERPRLYVKALCAEDKSTALASISLAKSLTKSGTKHIQNIKRYQESMKWE-IPFKFLR 236
             N + R +LY+KA C++D  +A AS+S A+ L +S +K  Q +KRYQ SM WE +PFK  R
Sbjct:   190 NVTTRVKLYMKAFCSDDSMSATASVSQARVLARSSSKLYQTLKRYQPSMTWERLPFKIWR 249

Query:   237 SNYVKPVK--KFQYLEIPLRGMEM 258
                V   K  K Q +EI LRGMEM
Sbjct:   250 WQNVNDNKGEKLQSMEIALRGMEM 273

 Score = 629 (226.5 bits), Expect = 3.4e-147, Sum P(3) = 3.4e-147
 Identities = 129/266 (48%), Positives = 171/266 (64%)

Query:   367 KVANVKAQXXXXXXXXXXXXCFLFEKLLPIRFLFLFPWFIFTSFLRHGRMYGQGGGISAV 426
             KV NVKAQ            CF+F+K L +RFL L PWF+F+SFL   +MYGQ GGISA 
Sbjct:   433 KVTNVKAQGTVIGTVYGVMGCFVFQKFLTVRFLSLLPWFLFSSFLSRSKMYGQAGGISAA 492

Query:   427 IGAVLILGRKSLGPPEEFAIARIVETFIGLTCTIIGELLFQSTRASTLAKSQLSKSLGTL 486
             IGAVLILGRK+ GPP EFAI RI+ETFIGL+C+I+ EL+FQ TRA+ +AK +LS+S   L
Sbjct:   493 IGAVLILGRKNFGPPSEFAIERIIETFIGLSCSIMVELVFQPTRAANIAKLELSRSFHAL 552

Query:   487 HDCISSMTLRASQASLLHKQKRLKMHVNELGTLIGEADVEPNFGFLPFHSACYSKLLVSL 546
             ++C S    +AS+A ++  QK+L+ H+NEL     EA  EP+F F PF+ +CY KL  SL
Sbjct:   553 YECASLFGAKASKADIMESQKKLRSHLNELKKFTAEAHAEPSFWFSPFNFSCYEKLFKSL 612

Query:   547 VKMVHLLHFCSYSIGFLEQESQKIDKASWKEDVQKLDGDVKLVKEMACSSIKCFNDDITT 606
              KM  LL F  Y+IGFL ++  K      KE +  +D D+K + E      K F ++IT 
Sbjct:   613 SKMADLLQFSGYAIGFLGEQG-KTKSPQCKEILSNVDKDLKSLTESIGLLAKSF-EEITL 670

Query:   607 IKSLAILEKELERKKINQWDFGQMGE 632
             +KSL  LEK L +     WD  ++G+
Sbjct:   671 LKSLDALEKALAKSDNTSWDI-ELGK 695

 Score = 127 (49.8 bits), Expect = 3.4e-147, Sum P(3) = 3.4e-147
 Identities = 37/106 (34%), Positives = 55/106 (51%)

Query:   262 LEELTCLTIKKVK-SYQILCNSMSVPESNEECSLKNFRTIPTISQNLPFFFFLFCMKLLN 320
             ++E   L+IK+V  S Q      S P++ +EC L+  + IP   Q+LPF+FFLFC++LL 
Sbjct:   297 IQERVILSIKRVNNSSQPSVTPESDPKNPDEC-LQTLQEIPGTPQDLPFYFFLFCIRLLE 355

Query:   321 CPMPKTDGSNKSCEEHVLSFKEAWTSWVCKDSPSPSVLPRQERQLS 366
               +      NK     VL  K    SW+  D  S  ++P  +  LS
Sbjct:   356 TIIIAKPEENKV---KVLENKFKTRSWI-SDWDSKKIMPALKLSLS 397


>TAIR|locus:2074889 [details] [associations]
            symbol:AT3G09450 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
            evidence=IEA] InterPro:IPR006726 Pfam:PF04632 GO:GO:0005886
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006810 EMBL:AC016661
            EMBL:AC011436 HOGENOM:HOG000239132 IPI:IPI00536522
            RefSeq:NP_187556.1 UniGene:At.53235 PRIDE:Q9S710
            EnsemblPlants:AT3G09450.1 GeneID:820103 KEGG:ath:AT3G09450
            TAIR:At3g09450 eggNOG:NOG128078 InParanoid:Q9S710 OMA:WDNITHE
            PhylomeDB:Q9S710 ProtClustDB:CLSN2915683 Genevestigator:Q9S710
            Uniprot:Q9S710
        Length = 775

 Score = 440 (159.9 bits), Expect = 1.0e-78, Sum P(2) = 1.0e-78
 Identities = 124/337 (36%), Positives = 179/337 (53%)

Query:     2 WLTCLASAYRTA--CTIVGSITFYGPSSLRGQVTFPAFSYVTVILI-VTDA--TLGDTLH 56
             WL  L  A RTA  C IV   T YGP  LR   TFPAFSY+T ILI ++DA  T G+ L 
Sbjct:     6 WLERLGLALRTAMACLIVSLTTLYGPKPLRHFTTFPAFSYLTTILIWLSDAEPTYGEVLK 65

Query:    57 GCWLALYATVQSIGPALLTMWLIGPXXXXXXXXX-XXXXXXXXXXXLPEGTHLVAKRIAL 115
              C    YAT Q+I  AL+++ ++GP                      P  T L+ KRIA 
Sbjct:    66 CCLDVSYATFQTIAIALVSVLVVGPASLGNGLVAPVAVALASFIVAFPVSTSLLTKRIAF 125

Query:   116 GQIVLTYVMGFV-NGEHSGAVMLPVRVAASTAIGVLACVLALFLPYPRLACYEVKWNYKQ 174
             GQIV+ YV   V NGE +   MLPV VA STA+G +A ++A+ LP+PRLA  ++    K 
Sbjct:   126 GQIVVVYVTFVVFNGEVAHVFMLPVHVAGSTALGAIASLIAVLLPFPRLAHSQMSKGCKL 185

Query:   175 LADNASERPRLYVKALCAEDKSTALASISLAKSLTKSGTKHIQNIKRYQESMKWEIP-FK 233
              A+NA ER  ++V+ + A D +TA   I+ A SL+ +    ++NIK + E + WE P  +
Sbjct:   186 YAENALERLNMFVEIMMARDNTTAQVLIARAASLSAAAKNTLKNIKIHHERISWERPDTR 245

Query:   234 FL-RSNYVKPVKKFQYLEIPLRGMEMAEVLEELTCLTIKKVKSYQILCNSMSVPESN--- 289
             FL R   + P +K    +  LRG+E+A  L   +C +  +  S   L   +  P ++   
Sbjct:   246 FLSRKQKLDPAEKLHATDFLLRGLELA--LG--SCSSFPQGMSRDELTRLLEGPRTHIAP 301

Query:   290 -EECSLKNFRTI------PTISQN-LPFFFFLFCMKL 318
               E +LK+  ++       ++S   LP  FF +C++L
Sbjct:   302 RSESTLKSQDSLGWHHEAESLSTAALPVCFFRYCVEL 338

 Score = 402 (146.6 bits), Expect = 1.0e-78, Sum P(2) = 1.0e-78
 Identities = 101/262 (38%), Positives = 143/262 (54%)

Query:   368 VANVKAQXXXXXXXXXXXXCFLFEKLLPIRFLFLFPWFIFTSFLRHGRMYGQGGGISAVI 427
             VAN + Q            C +F++L   RFL L PW I   F+RH ++YGQ GG++A I
Sbjct:   434 VANSRLQGTAMGSVYGLICCSVFQRLEEFRFLPLLPWIILAVFMRHSKVYGQPGGVTAAI 493

Query:   428 GAVLILGRKSLGPPEEFAIARIVETFIGLTCTIIGELLFQSTRASTLAKSQLSKSLGTLH 487
              A+LILGR++ G P EFAIARIVE  IGL C + GE+L    RA+TLA++++S  L  L 
Sbjct:   494 AALLILGRRNYGAPTEFAIARIVEASIGLLCFVFGEILVTPARAATLARTEISHCLDALL 553

Query:   488 DCISSMTLRASQ------ASLLHKQKRLKMHVNELGTLIGEADVEPNFGFLP-FHSACYS 540
             DCI S+ L + Q      A L   Q +LK HV  L     EA  EP   FL   ++  Y+
Sbjct:   554 DCIQSLVLCSEQKNQKVVADLRKSQVKLKSHVEALERFAAEALTEPKIPFLRRLNTDSYN 613

Query:   541 KLLVSLVKMVHLLHFCSYSIGFLEQESQKIDKASWKEDVQKLDGDVKLVKEMACSSIKCF 600
             +LL S  K+  L   C Y    L+  S      ++  D   +  +++  +E    S+KC 
Sbjct:   614 RLLGSFSKISDL---CLYVCDGLKNLSGVQPTLAFPWD--NITHELRAFQEKLHPSVKCL 668

Query:   601 NDDITTIKSLAILEKELERKKI 622
              + I+  KS A L+KEL+++KI
Sbjct:   669 KE-ISQTKSQARLQKELQKRKI 689


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.136   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      638       606   0.00086  120 3  11 22  0.48    33
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  627 (67 KB)
  Total size of DFA:  349 KB (2173 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  52.58u 0.22s 52.80t   Elapsed:  00:00:04
  Total cpu time:  52.58u 0.22s 52.80t   Elapsed:  00:00:04
  Start:  Tue May 21 14:32:08 2013   End:  Tue May 21 14:32:12 2013

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