Query 006623
Match_columns 638
No_of_seqs 346 out of 1418
Neff 5.3
Searched_HMMs 46136
Date Thu Mar 28 12:06:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006623.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006623hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02869 fatty aldehyde decarb 100.0 4E-199 8E-204 1622.4 48.9 617 1-637 1-619 (620)
2 PF12076 Wax2_C: WAX2 C-termin 100.0 1.3E-66 2.9E-71 490.3 11.0 164 466-633 1-164 (164)
3 PRK14982 acyl-ACP reductase; P 100.0 6.7E-37 1.5E-41 324.9 20.9 267 357-635 35-338 (340)
4 COG5322 Predicted dehydrogenas 100.0 3.3E-37 7.1E-42 311.7 15.3 236 388-635 85-351 (351)
5 KOG0873 C-4 sterol methyl oxid 100.0 4.9E-33 1.1E-37 284.2 14.6 215 50-277 35-260 (283)
6 COG3000 ERG3 Sterol desaturase 99.9 9E-27 2E-31 241.3 16.2 152 127-287 94-247 (271)
7 KOG0872 Sterol C5 desaturase [ 99.9 1.3E-24 2.8E-29 219.8 11.7 144 126-283 126-269 (312)
8 KOG0874 Sphingolipid hydroxyla 99.8 1.4E-21 3E-26 192.6 2.6 147 128-284 122-273 (287)
9 PF04116 FA_hydroxylase: Fatty 99.7 4.2E-17 9.1E-22 145.4 7.6 111 134-254 3-114 (114)
10 cd01078 NAD_bind_H4MPT_DH NADP 99.2 7.4E-11 1.6E-15 116.0 11.7 165 445-629 1-194 (194)
11 PLN02434 fatty acid hydroxylas 99.1 2.9E-09 6.2E-14 108.8 15.4 136 128-277 83-230 (237)
12 KOG0539 Sphingolipid fatty aci 97.9 2.4E-05 5.2E-10 78.2 7.5 136 130-278 85-234 (240)
13 PLN02601 beta-carotene hydroxy 97.4 0.0011 2.4E-08 68.8 11.1 132 118-265 126-272 (303)
14 COG4221 Short-chain alcohol de 97.0 0.00084 1.8E-08 69.3 5.3 44 464-509 7-52 (246)
15 COG0300 DltE Short-chain dehyd 97.0 0.00075 1.6E-08 70.7 5.0 49 461-511 4-54 (265)
16 PF01488 Shikimate_DH: Shikima 97.0 0.0011 2.5E-08 62.0 5.3 92 462-557 11-113 (135)
17 PRK07424 bifunctional sterol d 96.9 0.0035 7.6E-08 69.4 9.3 136 137-275 17-174 (406)
18 KOG1014 17 beta-hydroxysteroid 96.7 0.0014 3E-08 69.7 4.1 47 464-512 50-98 (312)
19 TIGR00507 aroE shikimate 5-deh 96.7 0.0045 9.7E-08 64.4 7.7 125 445-573 99-241 (270)
20 PRK00045 hemA glutamyl-tRNA re 96.5 0.0048 1E-07 68.5 6.8 154 461-627 180-360 (423)
21 PRK00258 aroE shikimate 5-dehy 96.5 0.0072 1.6E-07 63.3 7.7 127 444-573 103-248 (278)
22 PF13460 NAD_binding_10: NADH( 96.3 0.0065 1.4E-07 58.1 5.8 60 466-547 1-62 (183)
23 PF00670 AdoHcyase_NAD: S-aden 96.3 0.014 3.1E-07 57.0 8.0 92 462-557 22-115 (162)
24 COG0169 AroE Shikimate 5-dehyd 96.2 0.0093 2E-07 63.2 6.4 137 445-590 106-267 (283)
25 CHL00194 ycf39 Ycf39; Provisio 96.1 0.012 2.6E-07 62.0 6.9 61 465-545 2-64 (317)
26 TIGR02853 spore_dpaA dipicolin 96.1 0.033 7.1E-07 59.0 10.1 127 405-553 108-241 (287)
27 PRK13940 glutamyl-tRNA reducta 96.1 0.0079 1.7E-07 66.8 5.5 212 395-628 116-354 (414)
28 PRK09186 flagellin modificatio 95.9 0.015 3.3E-07 58.3 6.4 43 463-507 4-48 (256)
29 PLN00203 glutamyl-tRNA reducta 95.9 0.021 4.5E-07 65.3 8.1 210 397-627 201-449 (519)
30 cd01080 NAD_bind_m-THF_DH_Cycl 95.9 0.018 4E-07 56.4 6.5 87 449-557 28-120 (168)
31 PLN03209 translocon at the inn 95.8 0.021 4.5E-07 65.9 7.6 59 447-507 59-124 (576)
32 cd01065 NAD_bind_Shikimate_DH 95.7 0.042 9E-07 51.5 7.9 122 446-572 2-142 (155)
33 PRK14175 bifunctional 5,10-met 95.6 0.026 5.7E-07 59.9 6.9 153 392-565 43-245 (286)
34 PRK06196 oxidoreductase; Provi 95.4 0.028 6.2E-07 59.1 6.4 55 451-507 14-70 (315)
35 COG1086 Predicted nucleoside-d 95.3 0.07 1.5E-06 61.1 9.4 124 402-545 169-323 (588)
36 PRK08306 dipicolinate synthase 95.3 0.077 1.7E-06 56.4 9.1 88 462-556 151-244 (296)
37 PRK08618 ornithine cyclodeamin 95.2 0.11 2.3E-06 55.9 10.0 138 409-551 64-220 (325)
38 PRK06949 short chain dehydroge 95.1 0.036 7.8E-07 55.6 5.9 46 460-507 6-53 (258)
39 PRK14192 bifunctional 5,10-met 95.1 0.082 1.8E-06 56.1 8.7 128 389-556 100-234 (283)
40 PLN02780 ketoreductase/ oxidor 95.1 0.025 5.5E-07 60.2 4.9 44 463-508 53-98 (320)
41 PRK07231 fabG 3-ketoacyl-(acyl 95.0 0.044 9.5E-07 54.6 6.1 43 463-507 5-49 (251)
42 PRK08339 short chain dehydroge 95.0 0.044 9.5E-07 56.1 6.0 44 463-508 8-53 (263)
43 PRK06482 short chain dehydroge 94.9 0.041 8.9E-07 56.2 5.6 43 464-508 3-47 (276)
44 COG0373 HemA Glutamyl-tRNA red 94.9 0.032 7E-07 62.0 5.1 91 462-557 177-278 (414)
45 PRK07326 short chain dehydroge 94.9 0.046 1E-06 54.1 5.8 44 463-508 6-51 (237)
46 PRK08063 enoyl-(acyl carrier p 94.9 0.048 1E-06 54.5 5.8 41 464-506 5-48 (250)
47 PRK06101 short chain dehydroge 94.9 0.04 8.7E-07 55.3 5.3 41 464-506 2-44 (240)
48 COG0702 Predicted nucleoside-d 94.8 0.046 9.9E-07 55.1 5.6 38 465-504 2-41 (275)
49 cd05213 NAD_bind_Glutamyl_tRNA 94.8 0.062 1.3E-06 57.3 6.9 149 395-557 113-277 (311)
50 PRK08265 short chain dehydroge 94.8 0.042 9.1E-07 56.0 5.3 44 463-508 6-51 (261)
51 PRK05867 short chain dehydroge 94.8 0.044 9.5E-07 55.3 5.3 44 462-507 8-53 (253)
52 PRK14185 bifunctional 5,10-met 94.8 0.21 4.6E-06 53.3 10.6 144 392-556 42-236 (293)
53 PF10520 Kua-UEV1_localn: Kua- 94.8 0.07 1.5E-06 53.0 6.5 54 215-273 99-155 (178)
54 PRK08340 glucose-1-dehydrogena 94.7 0.052 1.1E-06 55.0 5.8 41 465-507 2-44 (259)
55 PRK07454 short chain dehydroge 94.7 0.058 1.2E-06 53.8 5.9 43 463-507 6-50 (241)
56 cd05212 NAD_bind_m-THF_DH_Cycl 94.7 0.13 2.8E-06 49.1 7.9 75 458-552 23-100 (140)
57 PRK14174 bifunctional 5,10-met 94.6 0.15 3.1E-06 54.6 9.0 144 393-556 43-238 (295)
58 PRK07523 gluconate 5-dehydroge 94.6 0.048 1E-06 55.0 5.1 44 462-507 9-54 (255)
59 PRK07825 short chain dehydroge 94.5 0.054 1.2E-06 55.3 5.3 44 463-508 5-50 (273)
60 PRK05854 short chain dehydroge 94.5 0.048 1E-06 57.6 5.0 43 463-507 14-58 (313)
61 PRK07063 short chain dehydroge 94.4 0.051 1.1E-06 54.9 4.9 44 463-508 7-52 (260)
62 PRK07024 short chain dehydroge 94.4 0.068 1.5E-06 54.1 5.6 43 464-508 3-47 (257)
63 PLN02896 cinnamyl-alcohol dehy 94.3 0.096 2.1E-06 55.9 6.9 46 457-504 4-51 (353)
64 PRK08267 short chain dehydroge 94.3 0.064 1.4E-06 54.2 5.3 43 464-508 2-46 (260)
65 TIGR00518 alaDH alanine dehydr 94.3 0.31 6.8E-06 53.4 10.9 89 463-557 167-271 (370)
66 PRK07109 short chain dehydroge 94.3 0.076 1.6E-06 56.8 6.0 44 462-507 7-52 (334)
67 PRK06194 hypothetical protein; 94.3 0.078 1.7E-06 54.4 5.9 42 464-507 7-50 (287)
68 PLN02253 xanthoxin dehydrogena 94.3 0.092 2E-06 53.8 6.4 43 463-507 18-62 (280)
69 PRK12429 3-hydroxybutyrate deh 94.3 0.06 1.3E-06 53.8 4.9 42 464-507 5-48 (258)
70 TIGR01963 PHB_DH 3-hydroxybuty 94.3 0.064 1.4E-06 53.5 5.1 41 464-506 2-44 (255)
71 PRK05993 short chain dehydroge 94.3 0.065 1.4E-06 55.2 5.3 41 464-506 5-47 (277)
72 PRK07890 short chain dehydroge 94.3 0.066 1.4E-06 53.8 5.2 43 463-507 5-49 (258)
73 KOG1208 Dehydrogenases with di 94.2 0.055 1.2E-06 58.2 4.8 53 455-509 27-81 (314)
74 PRK07067 sorbitol dehydrogenas 94.2 0.07 1.5E-06 53.8 5.3 44 463-508 6-51 (257)
75 PRK14178 bifunctional 5,10-met 94.2 0.11 2.3E-06 55.2 6.8 144 392-556 37-227 (279)
76 PRK08085 gluconate 5-dehydroge 94.2 0.067 1.5E-06 53.9 5.2 44 462-507 8-53 (254)
77 PRK06500 short chain dehydroge 94.2 0.075 1.6E-06 52.9 5.5 43 464-508 7-51 (249)
78 TIGR01472 gmd GDP-mannose 4,6- 94.2 0.066 1.4E-06 56.8 5.3 29 464-494 1-29 (343)
79 PRK05884 short chain dehydroge 94.2 0.07 1.5E-06 53.4 5.1 41 465-507 2-44 (223)
80 PRK07478 short chain dehydroge 94.2 0.064 1.4E-06 54.0 4.9 43 463-507 6-50 (254)
81 PTZ00075 Adenosylhomocysteinas 94.2 0.23 5.1E-06 56.2 9.7 144 460-611 251-419 (476)
82 PRK14190 bifunctional 5,10-met 94.1 0.11 2.4E-06 55.1 6.8 153 392-565 43-245 (284)
83 TIGR02371 ala_DH_arch alanine 94.1 0.41 8.9E-06 51.5 11.2 139 408-553 64-223 (325)
84 PRK09072 short chain dehydroge 94.1 0.1 2.2E-06 53.0 6.3 43 463-507 5-49 (263)
85 PRK14194 bifunctional 5,10-met 94.1 0.089 1.9E-06 56.3 6.1 154 393-565 45-249 (301)
86 PRK06407 ornithine cyclodeamin 94.1 0.22 4.8E-06 53.1 9.1 131 409-552 62-212 (301)
87 TIGR03325 BphB_TodD cis-2,3-di 94.1 0.078 1.7E-06 53.8 5.5 42 463-506 5-48 (262)
88 PRK05786 fabG 3-ketoacyl-(acyl 94.1 0.089 1.9E-06 52.2 5.7 41 464-506 6-48 (238)
89 PRK07831 short chain dehydroge 94.1 0.1 2.2E-06 53.0 6.2 44 463-507 17-62 (262)
90 PRK05872 short chain dehydroge 94.1 0.087 1.9E-06 55.0 5.9 45 462-508 8-54 (296)
91 PRK08017 oxidoreductase; Provi 94.1 0.076 1.7E-06 53.2 5.2 40 464-505 3-44 (256)
92 COG0451 WcaG Nucleoside-diphos 94.1 0.04 8.7E-07 56.6 3.3 101 465-600 2-108 (314)
93 PF02719 Polysacc_synt_2: Poly 94.0 0.061 1.3E-06 57.3 4.6 79 466-552 1-86 (293)
94 PLN02986 cinnamyl-alcohol dehy 94.0 0.094 2E-06 55.0 6.0 37 464-502 6-44 (322)
95 PRK06200 2,3-dihydroxy-2,3-dih 94.0 0.083 1.8E-06 53.6 5.4 44 463-508 6-51 (263)
96 PF02423 OCD_Mu_crystall: Orni 94.0 0.14 3.1E-06 54.8 7.4 139 408-553 64-225 (313)
97 PRK07062 short chain dehydroge 94.0 0.071 1.5E-06 54.1 4.8 44 462-507 7-52 (265)
98 KOG1205 Predicted dehydrogenas 94.0 0.076 1.6E-06 56.3 5.1 44 463-508 12-57 (282)
99 PRK06924 short chain dehydroge 93.9 0.086 1.9E-06 52.8 5.3 40 464-505 2-44 (251)
100 PRK08416 7-alpha-hydroxysteroi 93.9 0.11 2.3E-06 52.8 6.1 43 463-507 8-53 (260)
101 PRK06180 short chain dehydroge 93.9 0.09 1.9E-06 54.0 5.5 42 463-506 4-47 (277)
102 PRK06139 short chain dehydroge 93.9 0.074 1.6E-06 57.0 5.0 43 463-507 7-51 (330)
103 PRK06138 short chain dehydroge 93.9 0.11 2.5E-06 51.8 6.1 43 463-507 5-49 (252)
104 PRK07102 short chain dehydroge 93.9 0.11 2.3E-06 52.1 5.9 41 464-506 2-44 (243)
105 PRK14193 bifunctional 5,10-met 93.9 0.18 4E-06 53.5 7.8 165 393-578 44-264 (284)
106 PRK05866 short chain dehydroge 93.9 0.099 2.1E-06 54.7 5.8 43 463-507 40-84 (293)
107 PRK12829 short chain dehydroge 93.9 0.088 1.9E-06 52.9 5.2 44 462-507 10-55 (264)
108 PRK05717 oxidoreductase; Valid 93.8 0.11 2.5E-06 52.4 6.0 44 462-507 9-54 (255)
109 TIGR02415 23BDH acetoin reduct 93.8 0.11 2.3E-06 52.1 5.7 42 464-507 1-44 (254)
110 PRK06124 gluconate 5-dehydroge 93.8 0.1 2.2E-06 52.5 5.6 45 461-507 9-55 (256)
111 PRK08643 acetoin reductase; Va 93.7 0.097 2.1E-06 52.7 5.3 42 464-507 3-46 (256)
112 PRK06057 short chain dehydroge 93.7 0.1 2.2E-06 52.6 5.5 44 463-508 7-52 (255)
113 TIGR01035 hemA glutamyl-tRNA r 93.7 0.15 3.2E-06 56.8 7.1 153 462-627 179-357 (417)
114 PRK06182 short chain dehydroge 93.7 0.1 2.2E-06 53.3 5.5 41 463-505 3-45 (273)
115 PRK06141 ornithine cyclodeamin 93.7 0.34 7.3E-06 51.9 9.5 97 409-508 62-171 (314)
116 COG2910 Putative NADH-flavin r 93.7 0.16 3.4E-06 51.1 6.4 142 465-608 2-201 (211)
117 PRK05599 hypothetical protein; 93.7 0.13 2.7E-06 52.2 6.0 41 465-508 2-44 (246)
118 PRK08251 short chain dehydroge 93.7 0.093 2E-06 52.4 5.0 42 464-507 3-46 (248)
119 PRK08862 short chain dehydroge 93.6 0.091 2E-06 53.0 4.9 43 463-507 5-49 (227)
120 PRK09135 pteridine reductase; 93.6 0.15 3.2E-06 50.6 6.3 42 463-506 6-50 (249)
121 PRK10538 malonic semialdehyde 93.6 0.11 2.3E-06 52.4 5.4 41 465-507 2-44 (248)
122 PRK14187 bifunctional 5,10-met 93.6 0.13 2.9E-06 54.8 6.2 142 394-556 45-235 (294)
123 PF00106 adh_short: short chai 93.6 0.083 1.8E-06 49.4 4.2 43 464-508 1-48 (167)
124 PRK14179 bifunctional 5,10-met 93.6 0.13 2.8E-06 54.7 6.0 152 393-565 44-245 (284)
125 PRK14189 bifunctional 5,10-met 93.6 0.17 3.7E-06 53.8 6.9 150 394-564 45-244 (285)
126 PRK14171 bifunctional 5,10-met 93.6 0.16 3.4E-06 54.1 6.7 151 393-564 44-245 (288)
127 PF03446 NAD_binding_2: NAD bi 93.6 0.082 1.8E-06 50.9 4.2 105 464-574 2-124 (163)
128 PRK12742 oxidoreductase; Provi 93.5 0.12 2.5E-06 51.3 5.4 43 463-507 6-51 (237)
129 PRK06046 alanine dehydrogenase 93.5 0.42 9E-06 51.4 10.0 139 408-553 65-224 (326)
130 PRK12549 shikimate 5-dehydroge 93.5 0.19 4.1E-06 53.1 7.2 61 445-508 109-172 (284)
131 PRK05876 short chain dehydroge 93.5 0.097 2.1E-06 54.1 4.9 43 463-507 6-50 (275)
132 PRK08213 gluconate 5-dehydroge 93.5 0.12 2.5E-06 52.3 5.3 43 463-507 12-56 (259)
133 PRK08703 short chain dehydroge 93.5 0.1 2.2E-06 52.1 4.9 43 463-507 6-50 (239)
134 PRK06197 short chain dehydroge 93.5 0.1 2.3E-06 54.4 5.1 41 462-504 15-57 (306)
135 PRK09291 short chain dehydroge 93.5 0.12 2.6E-06 51.9 5.3 41 464-506 3-45 (257)
136 PRK14182 bifunctional 5,10-met 93.4 0.17 3.7E-06 53.7 6.6 164 394-578 43-262 (282)
137 PRK12826 3-ketoacyl-(acyl-carr 93.4 0.094 2E-06 52.1 4.5 43 463-507 6-50 (251)
138 PRK12828 short chain dehydroge 93.4 0.12 2.6E-06 50.9 5.1 38 463-502 7-46 (239)
139 PRK14166 bifunctional 5,10-met 93.4 0.19 4.1E-06 53.4 6.8 166 392-578 41-262 (282)
140 PRK05875 short chain dehydroge 93.4 0.14 3.1E-06 52.2 5.8 43 462-506 6-50 (276)
141 PRK07453 protochlorophyllide o 93.3 0.12 2.5E-06 54.6 5.2 43 463-507 6-50 (322)
142 PRK14191 bifunctional 5,10-met 93.3 0.19 4.2E-06 53.4 6.8 152 392-564 42-243 (285)
143 KOG1370 S-adenosylhomocysteine 93.3 0.2 4.3E-06 53.7 6.8 153 463-622 214-395 (434)
144 PRK07074 short chain dehydroge 93.3 0.13 2.8E-06 51.8 5.3 42 464-507 3-46 (257)
145 PRK14180 bifunctional 5,10-met 93.3 0.19 4.2E-06 53.3 6.8 153 392-565 42-244 (282)
146 PRK08177 short chain dehydroge 93.3 0.11 2.5E-06 51.4 4.8 39 464-504 2-42 (225)
147 PRK08263 short chain dehydroge 93.2 0.14 3E-06 52.5 5.5 42 464-507 4-47 (275)
148 PRK12550 shikimate 5-dehydroge 93.2 0.16 3.6E-06 53.4 6.1 60 445-508 105-167 (272)
149 PRK12548 shikimate 5-dehydroge 93.2 0.13 2.8E-06 54.3 5.4 60 445-507 108-173 (289)
150 PRK05476 S-adenosyl-L-homocyst 93.2 0.45 9.8E-06 53.3 9.8 141 460-608 209-373 (425)
151 PF05368 NmrA: NmrA-like famil 93.2 0.17 3.8E-06 50.6 6.0 39 466-506 1-43 (233)
152 PRK07340 ornithine cyclodeamin 93.2 0.84 1.8E-05 48.7 11.5 97 409-508 62-171 (304)
153 PRK12939 short chain dehydroge 93.1 0.15 3.3E-06 50.7 5.5 43 463-507 7-51 (250)
154 PRK06172 short chain dehydroge 93.1 0.12 2.7E-06 51.8 4.9 43 463-507 7-51 (253)
155 PRK07097 gluconate 5-dehydroge 93.1 0.16 3.5E-06 51.7 5.7 48 458-507 5-54 (265)
156 PRK12384 sorbitol-6-phosphate 93.1 0.13 2.8E-06 51.8 5.0 42 464-507 3-46 (259)
157 PRK14173 bifunctional 5,10-met 93.1 0.2 4.2E-06 53.4 6.5 145 392-556 40-230 (287)
158 PRK12936 3-ketoacyl-(acyl-carr 93.1 0.15 3.3E-06 50.5 5.4 43 463-507 6-50 (245)
159 PRK07035 short chain dehydroge 93.0 0.15 3.2E-06 51.2 5.3 43 463-507 8-52 (252)
160 PRK14169 bifunctional 5,10-met 93.0 0.2 4.3E-06 53.3 6.4 152 392-564 41-242 (282)
161 PRK07774 short chain dehydroge 93.0 0.16 3.5E-06 50.7 5.5 43 463-507 6-50 (250)
162 PRK07832 short chain dehydroge 93.0 0.15 3.2E-06 52.2 5.3 41 464-506 1-43 (272)
163 PRK07677 short chain dehydroge 93.0 0.13 2.8E-06 51.8 4.9 42 464-507 2-45 (252)
164 PRK05693 short chain dehydroge 93.0 0.15 3.2E-06 52.2 5.3 40 464-505 2-43 (274)
165 PRK08945 putative oxoacyl-(acy 93.0 0.13 2.7E-06 51.7 4.7 44 462-507 11-56 (247)
166 PRK05653 fabG 3-ketoacyl-(acyl 93.0 0.15 3.4E-06 50.2 5.3 41 464-506 6-48 (246)
167 PRK06914 short chain dehydroge 93.0 0.16 3.4E-06 52.0 5.4 41 464-506 4-46 (280)
168 PRK14170 bifunctional 5,10-met 93.0 0.23 4.9E-06 52.9 6.7 152 392-564 42-243 (284)
169 PRK06953 short chain dehydroge 93.0 0.14 3.1E-06 50.6 5.0 40 464-505 2-43 (222)
170 PRK06823 ornithine cyclodeamin 92.9 0.61 1.3E-05 50.2 10.0 138 409-553 64-223 (315)
171 PRK13394 3-hydroxybutyrate deh 92.9 0.15 3.3E-06 51.1 5.2 43 463-507 7-51 (262)
172 PRK08589 short chain dehydroge 92.9 0.13 2.9E-06 52.7 4.9 42 463-507 6-49 (272)
173 PRK06947 glucose-1-dehydrogena 92.9 0.14 3.1E-06 51.1 4.9 41 464-506 3-46 (248)
174 PRK06935 2-deoxy-D-gluconate 3 92.9 0.18 3.8E-06 51.0 5.6 43 461-506 13-57 (258)
175 PRK08277 D-mannonate oxidoredu 92.8 0.16 3.6E-06 51.9 5.3 43 463-507 10-54 (278)
176 PRK07060 short chain dehydroge 92.7 0.21 4.5E-06 49.6 5.9 44 462-507 8-53 (245)
177 PRK06125 short chain dehydroge 92.7 0.15 3.3E-06 51.5 4.9 44 463-508 7-52 (259)
178 PLN02662 cinnamyl-alcohol dehy 92.7 0.17 3.7E-06 52.7 5.4 34 464-499 5-40 (322)
179 PRK05650 short chain dehydroge 92.6 0.17 3.8E-06 51.5 5.2 40 465-506 2-43 (270)
180 PRK07814 short chain dehydroge 92.6 0.19 4.2E-06 51.1 5.6 44 462-507 9-54 (263)
181 TIGR03206 benzo_BadH 2-hydroxy 92.6 0.2 4.4E-06 49.9 5.5 42 463-506 3-46 (250)
182 PRK09242 tropinone reductase; 92.6 0.18 4E-06 50.8 5.3 43 463-507 9-53 (257)
183 PRK14172 bifunctional 5,10-met 92.6 0.26 5.6E-06 52.3 6.5 151 394-565 45-244 (278)
184 PLN00198 anthocyanidin reducta 92.6 0.26 5.6E-06 52.2 6.6 41 459-501 5-47 (338)
185 PRK14176 bifunctional 5,10-met 92.6 0.31 6.7E-06 51.9 7.0 142 395-556 52-239 (287)
186 TIGR01289 LPOR light-dependent 92.5 0.18 3.9E-06 53.3 5.4 44 463-508 3-49 (314)
187 PRK07666 fabG 3-ketoacyl-(acyl 92.5 0.21 4.6E-06 49.7 5.5 43 463-507 7-51 (239)
188 PRK12825 fabG 3-ketoacyl-(acyl 92.5 0.19 4.2E-06 49.5 5.2 42 463-506 6-50 (249)
189 PRK07775 short chain dehydroge 92.5 0.21 4.5E-06 51.4 5.5 43 462-506 9-53 (274)
190 PLN02427 UDP-apiose/xylose syn 92.4 0.27 5.8E-06 53.3 6.6 42 460-503 11-55 (386)
191 PLN00141 Tic62-NAD(P)-related 92.4 0.18 3.9E-06 51.2 5.0 39 463-503 17-57 (251)
192 PRK12746 short chain dehydroge 92.4 0.2 4.4E-06 50.2 5.3 41 464-506 7-50 (254)
193 PRK14177 bifunctional 5,10-met 92.4 0.26 5.7E-06 52.4 6.3 142 394-556 46-234 (284)
194 PRK07589 ornithine cyclodeamin 92.4 0.91 2E-05 49.6 10.6 139 408-553 65-226 (346)
195 PRK08642 fabG 3-ketoacyl-(acyl 92.4 0.22 4.8E-06 49.7 5.5 43 463-507 5-50 (253)
196 PRK07904 short chain dehydroge 92.4 0.17 3.6E-06 51.7 4.7 43 463-507 8-54 (253)
197 PRK08264 short chain dehydroge 92.3 0.17 3.7E-06 50.2 4.6 37 463-501 6-45 (238)
198 PF02882 THF_DHG_CYH_C: Tetrah 92.3 0.28 6E-06 48.0 5.9 83 451-552 19-108 (160)
199 PRK07041 short chain dehydroge 92.3 0.19 4.1E-06 49.6 4.9 39 467-507 1-41 (230)
200 PRK05557 fabG 3-ketoacyl-(acyl 92.3 0.23 5E-06 49.0 5.5 30 463-494 5-34 (248)
201 PRK07806 short chain dehydroge 92.2 0.27 5.8E-06 49.2 5.8 42 463-506 6-50 (248)
202 PRK14186 bifunctional 5,10-met 92.1 0.29 6.3E-06 52.3 6.3 144 392-556 43-233 (297)
203 PRK14183 bifunctional 5,10-met 92.1 0.35 7.6E-06 51.4 6.8 165 393-578 43-262 (281)
204 PRK06181 short chain dehydroge 92.1 0.19 4.1E-06 50.8 4.7 41 464-506 2-44 (263)
205 PRK14184 bifunctional 5,10-met 92.1 0.34 7.4E-06 51.6 6.7 150 394-564 44-246 (286)
206 PRK06841 short chain dehydroge 92.1 0.25 5.4E-06 49.6 5.5 35 462-498 14-50 (255)
207 PLN02494 adenosylhomocysteinas 92.0 1.1 2.4E-05 50.9 10.9 158 442-609 232-418 (477)
208 TIGR00561 pntA NAD(P) transhyd 92.0 0.39 8.4E-06 55.0 7.5 179 406-606 104-336 (511)
209 PRK06484 short chain dehydroge 92.0 0.24 5.1E-06 55.7 5.8 45 462-508 268-314 (520)
210 PRK08690 enoyl-(acyl carrier p 92.0 0.23 5.1E-06 50.7 5.3 32 463-494 6-37 (261)
211 PRK06113 7-alpha-hydroxysteroi 91.9 0.26 5.7E-06 49.7 5.5 43 462-506 10-54 (255)
212 TIGR01832 kduD 2-deoxy-D-gluco 91.9 0.25 5.4E-06 49.4 5.2 31 462-494 4-34 (248)
213 TIGR01746 Thioester-redct thio 91.9 0.19 4.1E-06 52.6 4.6 32 465-498 1-36 (367)
214 PLN02583 cinnamoyl-CoA reducta 91.9 0.41 8.8E-06 50.1 7.0 31 462-494 5-35 (297)
215 TIGR03589 PseB UDP-N-acetylglu 91.9 0.33 7.1E-06 51.6 6.4 41 464-506 5-49 (324)
216 PLN02730 enoyl-[acyl-carrier-p 91.9 0.24 5.1E-06 52.9 5.3 47 462-508 8-55 (303)
217 TIGR01500 sepiapter_red sepiap 91.9 0.21 4.6E-06 50.6 4.7 42 465-508 2-49 (256)
218 PLN02516 methylenetetrahydrofo 91.8 0.33 7.2E-06 52.0 6.3 143 393-556 51-242 (299)
219 PRK07576 short chain dehydroge 91.8 0.3 6.5E-06 49.9 5.7 43 462-506 8-52 (264)
220 PRK12743 oxidoreductase; Provi 91.7 0.25 5.4E-06 50.0 5.0 41 464-506 3-46 (256)
221 PRK08594 enoyl-(acyl carrier p 91.7 0.27 5.9E-06 50.2 5.3 44 463-508 7-57 (257)
222 PRK06179 short chain dehydroge 91.7 0.21 4.5E-06 50.8 4.4 35 464-500 5-41 (270)
223 PRK07069 short chain dehydroge 91.6 0.21 4.7E-06 49.7 4.4 40 466-507 2-44 (251)
224 KOG0725 Reductases with broad 91.5 0.39 8.4E-06 50.5 6.3 44 462-507 7-52 (270)
225 PRK08628 short chain dehydroge 91.5 0.27 5.9E-06 49.5 5.0 37 462-500 6-44 (258)
226 PRK06463 fabG 3-ketoacyl-(acyl 91.5 0.29 6.3E-06 49.4 5.2 41 463-505 7-50 (255)
227 PRK08219 short chain dehydroge 91.5 0.27 5.8E-06 48.2 4.8 40 464-506 4-45 (227)
228 TIGR02685 pter_reduc_Leis pter 91.3 0.24 5.3E-06 50.5 4.5 43 464-508 2-47 (267)
229 PRK06997 enoyl-(acyl carrier p 91.3 0.29 6.4E-06 50.1 5.1 45 463-507 6-55 (260)
230 PRK06199 ornithine cyclodeamin 91.3 1.1 2.4E-05 49.4 9.9 153 409-568 92-278 (379)
231 COG2423 Predicted ornithine cy 91.3 0.78 1.7E-05 49.8 8.5 156 408-570 66-251 (330)
232 PLN02214 cinnamoyl-CoA reducta 91.3 0.4 8.6E-06 51.4 6.2 35 463-499 10-46 (342)
233 PRK06505 enoyl-(acyl carrier p 91.2 0.33 7.2E-06 50.2 5.5 35 463-497 7-43 (271)
234 PLN02989 cinnamyl-alcohol dehy 91.2 0.38 8.1E-06 50.5 5.9 37 463-501 5-43 (325)
235 PLN02968 Probable N-acetyl-gam 91.1 0.32 6.9E-06 53.7 5.5 137 462-606 37-196 (381)
236 PRK12747 short chain dehydroge 91.1 0.3 6.5E-06 49.1 4.9 42 463-506 4-48 (252)
237 PRK12937 short chain dehydroge 91.0 0.38 8.3E-06 47.7 5.5 30 463-494 5-34 (245)
238 PRK14167 bifunctional 5,10-met 91.0 0.46 1E-05 50.9 6.3 142 394-556 44-236 (297)
239 PRK08936 glucose-1-dehydrogena 91.0 0.32 6.9E-06 49.3 4.9 42 463-506 7-51 (261)
240 PRK07985 oxidoreductase; Provi 90.9 0.33 7.1E-06 50.8 5.1 41 463-505 49-93 (294)
241 PRK10792 bifunctional 5,10-met 90.9 0.57 1.2E-05 49.9 6.9 144 392-556 44-234 (285)
242 PRK08217 fabG 3-ketoacyl-(acyl 90.9 0.38 8.2E-06 47.8 5.3 43 463-507 5-49 (253)
243 PRK14181 bifunctional 5,10-met 90.9 0.71 1.5E-05 49.2 7.6 143 393-556 38-232 (287)
244 PRK08303 short chain dehydroge 90.8 0.29 6.4E-06 51.7 4.7 32 463-496 8-41 (305)
245 PLN02616 tetrahydrofolate dehy 90.8 0.43 9.3E-06 52.3 5.9 144 392-556 114-306 (364)
246 PRK08278 short chain dehydroge 90.8 0.39 8.4E-06 49.4 5.4 34 463-498 6-41 (273)
247 PRK14168 bifunctional 5,10-met 90.7 0.49 1.1E-05 50.7 6.2 144 392-556 44-240 (297)
248 PRK06483 dihydromonapterin red 90.7 0.4 8.7E-06 47.7 5.2 35 463-499 2-38 (236)
249 PRK06123 short chain dehydroge 90.6 0.37 8.1E-06 48.0 5.0 41 464-506 3-46 (248)
250 TIGR03649 ergot_EASG ergot alk 90.6 0.21 4.7E-06 51.4 3.4 33 465-499 1-35 (285)
251 PRK14027 quinate/shikimate deh 90.6 0.53 1.1E-05 49.9 6.3 61 445-508 109-172 (283)
252 PRK15181 Vi polysaccharide bio 90.6 0.5 1.1E-05 50.6 6.3 31 462-494 14-44 (348)
253 PRK05565 fabG 3-ketoacyl-(acyl 90.6 0.43 9.2E-06 47.3 5.4 42 463-506 5-49 (247)
254 PRK07889 enoyl-(acyl carrier p 90.5 0.42 9.2E-06 48.7 5.3 44 463-508 7-56 (256)
255 PRK06484 short chain dehydroge 90.4 0.43 9.2E-06 53.6 5.8 45 462-508 4-50 (520)
256 PF01118 Semialdhyde_dh: Semia 90.4 0.37 7.9E-06 44.1 4.4 97 465-566 1-109 (121)
257 PRK12935 acetoacetyl-CoA reduc 90.4 0.37 7.9E-06 48.1 4.7 42 463-506 6-50 (247)
258 PRK09134 short chain dehydroge 90.4 0.49 1.1E-05 47.8 5.7 43 462-506 8-53 (258)
259 PRK06720 hypothetical protein; 90.4 0.44 9.6E-06 46.5 5.1 43 462-506 15-59 (169)
260 PRK12481 2-deoxy-D-gluconate 3 90.4 0.39 8.5E-06 48.7 5.0 31 462-494 7-37 (251)
261 PRK14188 bifunctional 5,10-met 90.3 0.52 1.1E-05 50.4 6.0 146 392-556 43-233 (296)
262 PLN02897 tetrahydrofolate dehy 90.3 0.5 1.1E-05 51.5 5.9 86 450-556 196-289 (345)
263 PLN02650 dihydroflavonol-4-red 90.3 0.36 7.8E-06 51.4 4.8 40 462-503 4-45 (351)
264 TIGR01809 Shik-DH-AROM shikima 90.3 0.9 1.9E-05 47.9 7.7 61 445-508 105-170 (282)
265 PRK08159 enoyl-(acyl carrier p 90.2 0.48 1E-05 49.0 5.5 46 463-508 10-60 (272)
266 PRK07577 short chain dehydroge 90.2 0.32 6.9E-06 48.1 4.1 33 464-498 4-38 (234)
267 PRK07856 short chain dehydroge 90.2 0.34 7.4E-06 48.8 4.3 35 463-499 6-42 (252)
268 PRK09730 putative NAD(P)-bindi 90.2 0.46 1E-05 47.1 5.2 41 464-506 2-45 (247)
269 PLN02686 cinnamoyl-CoA reducta 90.1 0.46 9.9E-06 51.6 5.5 41 461-503 51-93 (367)
270 PRK06114 short chain dehydroge 90.0 0.46 9.9E-06 48.0 5.1 42 462-505 7-51 (254)
271 PRK06079 enoyl-(acyl carrier p 90.0 0.46 1E-05 48.3 5.1 32 463-496 7-42 (252)
272 TIGR02622 CDP_4_6_dhtase CDP-g 90.0 0.47 1E-05 50.6 5.4 34 464-499 5-40 (349)
273 PRK08993 2-deoxy-D-gluconate 3 89.9 0.42 9.1E-06 48.3 4.7 32 461-494 8-39 (253)
274 PRK08415 enoyl-(acyl carrier p 89.8 0.51 1.1E-05 49.0 5.4 46 463-508 5-55 (274)
275 PRK12745 3-ketoacyl-(acyl-carr 89.8 0.52 1.1E-05 47.2 5.2 29 464-494 3-31 (256)
276 PRK07023 short chain dehydroge 89.7 0.37 8.1E-06 48.2 4.2 33 464-498 2-36 (243)
277 PRK07792 fabG 3-ketoacyl-(acyl 89.7 0.52 1.1E-05 49.6 5.4 43 462-506 11-56 (306)
278 PRK12823 benD 1,6-dihydroxycyc 89.7 0.46 9.9E-06 47.9 4.8 41 463-506 8-50 (260)
279 PRK06198 short chain dehydroge 89.7 0.45 9.8E-06 47.9 4.7 41 463-505 6-49 (260)
280 PRK12827 short chain dehydroge 89.6 0.57 1.2E-05 46.4 5.4 42 463-506 6-53 (249)
281 PF10727 Rossmann-like: Rossma 89.6 0.45 9.8E-06 44.8 4.3 69 463-536 10-83 (127)
282 PRK07533 enoyl-(acyl carrier p 89.4 0.62 1.3E-05 47.5 5.5 46 462-507 9-59 (258)
283 PRK08226 short chain dehydroge 89.4 0.61 1.3E-05 47.1 5.5 33 463-497 6-40 (263)
284 PRK09496 trkA potassium transp 89.4 0.71 1.5E-05 51.0 6.4 85 407-507 178-274 (453)
285 TIGR01831 fabG_rel 3-oxoacyl-( 89.3 0.42 9.2E-06 47.4 4.1 39 466-506 1-42 (239)
286 PRK06523 short chain dehydroge 89.3 0.42 9.2E-06 48.2 4.2 35 462-498 8-44 (260)
287 PRK06128 oxidoreductase; Provi 89.3 0.48 1E-05 49.5 4.7 30 463-494 55-84 (300)
288 COG1748 LYS9 Saccharopine dehy 89.3 0.55 1.2E-05 52.1 5.3 87 464-553 2-100 (389)
289 PRK05855 short chain dehydroge 89.2 0.51 1.1E-05 53.0 5.2 43 463-507 315-359 (582)
290 PRK00676 hemA glutamyl-tRNA re 89.0 0.56 1.2E-05 51.1 5.1 92 395-497 110-208 (338)
291 PLN03139 formate dehydrogenase 89.0 0.41 8.8E-06 53.0 4.1 102 461-568 197-322 (386)
292 PRK07201 short chain dehydroge 89.0 0.57 1.2E-05 54.1 5.5 43 463-507 371-415 (657)
293 PRK07424 bifunctional sterol d 88.9 0.58 1.3E-05 52.1 5.3 37 463-501 178-216 (406)
294 PLN02778 3,5-epimerase/4-reduc 88.9 0.58 1.3E-05 49.3 5.1 36 457-494 2-38 (298)
295 PRK12938 acetyacetyl-CoA reduc 88.9 0.72 1.6E-05 46.0 5.5 30 463-494 3-32 (246)
296 PF01210 NAD_Gly3P_dh_N: NAD-d 88.8 0.71 1.5E-05 44.2 5.2 39 465-506 1-41 (157)
297 PRK06398 aldose dehydrogenase; 88.8 0.46 1E-05 48.4 4.1 34 463-498 6-41 (258)
298 PRK12749 quinate/shikimate deh 88.8 0.67 1.5E-05 49.2 5.4 105 383-509 63-173 (288)
299 PRK07791 short chain dehydroge 88.7 0.63 1.4E-05 48.4 5.1 43 463-507 6-59 (286)
300 PRK06603 enoyl-(acyl carrier p 88.6 0.69 1.5E-05 47.3 5.2 43 464-506 9-56 (260)
301 TIGR01829 AcAcCoA_reduct aceto 88.6 0.73 1.6E-05 45.6 5.3 39 464-504 1-42 (242)
302 TIGR03466 HpnA hopanoid-associ 88.6 0.5 1.1E-05 49.0 4.3 33 465-499 2-36 (328)
303 PF02826 2-Hacid_dh_C: D-isome 88.3 1.7 3.8E-05 42.4 7.6 89 462-557 35-135 (178)
304 PRK06077 fabG 3-ketoacyl-(acyl 88.0 0.82 1.8E-05 45.6 5.3 30 463-494 6-35 (252)
305 PRK12744 short chain dehydroge 88.0 0.67 1.4E-05 46.8 4.6 30 463-494 8-37 (257)
306 PRK06171 sorbitol-6-phosphate 87.7 0.56 1.2E-05 47.5 3.9 35 463-499 9-45 (266)
307 PRK12859 3-ketoacyl-(acyl-carr 87.7 0.74 1.6E-05 46.7 4.8 32 463-494 6-37 (256)
308 PRK15461 NADH-dependent gamma- 87.4 1.4 3E-05 46.6 6.7 105 465-575 3-126 (296)
309 TIGR02992 ectoine_eutC ectoine 87.3 1.2 2.6E-05 48.0 6.2 116 430-552 86-224 (326)
310 PF02737 3HCDH_N: 3-hydroxyacy 87.3 0.86 1.9E-05 44.9 4.8 41 465-508 1-43 (180)
311 PRK06701 short chain dehydroge 87.2 0.91 2E-05 47.4 5.2 30 463-494 46-75 (290)
312 PRK07370 enoyl-(acyl carrier p 87.2 0.72 1.6E-05 47.1 4.4 32 463-494 6-37 (258)
313 PRK07984 enoyl-(acyl carrier p 87.2 0.98 2.1E-05 46.6 5.4 31 464-494 7-37 (262)
314 TIGR02632 RhaD_aldol-ADH rhamn 87.0 0.94 2E-05 53.5 5.7 44 462-507 413-458 (676)
315 PLN02695 GDP-D-mannose-3',5'-e 87.0 0.72 1.6E-05 50.1 4.4 31 462-494 20-50 (370)
316 PRK06940 short chain dehydroge 86.8 0.93 2E-05 46.8 5.0 40 464-507 3-44 (275)
317 PRK08309 short chain dehydroge 86.5 0.95 2.1E-05 44.6 4.6 41 465-508 2-44 (177)
318 PLN03154 putative allyl alcoho 86.5 2.6 5.7E-05 45.2 8.4 59 448-508 142-204 (348)
319 TIGR00936 ahcY adenosylhomocys 86.4 3 6.5E-05 46.6 8.9 159 442-609 173-357 (406)
320 PLN02653 GDP-mannose 4,6-dehyd 86.2 1 2.2E-05 47.7 5.0 30 463-494 6-35 (340)
321 KOG1502 Flavonol reductase/cin 86.2 0.84 1.8E-05 49.5 4.3 38 462-501 5-44 (327)
322 PF01073 3Beta_HSD: 3-beta hyd 86.1 0.61 1.3E-05 49.0 3.2 65 467-546 1-67 (280)
323 PRK08291 ectoine utilization p 86.0 1.7 3.6E-05 46.9 6.6 76 430-509 89-179 (330)
324 PRK08655 prephenate dehydrogen 86.0 1.7 3.6E-05 48.9 6.8 86 465-554 2-94 (437)
325 PRK09310 aroDE bifunctional 3- 86.0 1.3 2.9E-05 50.2 6.0 61 445-508 314-376 (477)
326 TIGR01915 npdG NADPH-dependent 85.9 1.3 2.7E-05 44.8 5.3 40 465-506 2-43 (219)
327 TIGR01830 3oxo_ACP_reduc 3-oxo 85.8 0.89 1.9E-05 44.7 4.1 39 466-506 1-42 (239)
328 PRK12824 acetoacetyl-CoA reduc 85.6 1.3 2.9E-05 43.8 5.2 29 464-494 3-31 (245)
329 cd01079 NAD_bind_m-THF_DH NAD 85.6 2.1 4.6E-05 43.3 6.6 87 460-552 59-156 (197)
330 PLN00015 protochlorophyllide r 85.5 0.91 2E-05 47.7 4.2 40 467-508 1-43 (308)
331 PRK08324 short chain dehydroge 85.4 1.1 2.4E-05 52.9 5.2 44 463-508 422-467 (681)
332 PLN02657 3,8-divinyl protochlo 85.4 1 2.3E-05 49.4 4.7 40 458-499 55-96 (390)
333 cd01075 NAD_bind_Leu_Phe_Val_D 85.2 4.4 9.6E-05 40.6 8.7 149 462-633 27-186 (200)
334 cd00401 AdoHcyase S-adenosyl-L 85.2 4.7 0.0001 45.2 9.7 105 442-554 180-291 (413)
335 PRK12748 3-ketoacyl-(acyl-carr 85.2 1.3 2.8E-05 44.7 5.0 32 463-494 5-36 (256)
336 PF13561 adh_short_C2: Enoyl-( 85.1 1.1 2.3E-05 45.0 4.4 39 470-508 1-45 (241)
337 PRK12367 short chain dehydroge 85.1 1.2 2.5E-05 45.7 4.7 33 463-497 14-48 (245)
338 PRK08261 fabG 3-ketoacyl-(acyl 85.0 1.5 3.3E-05 48.5 5.9 45 462-508 209-257 (450)
339 PLN02240 UDP-glucose 4-epimera 84.9 1.4 3E-05 46.6 5.3 29 464-494 6-34 (352)
340 cd05311 NAD_bind_2_malic_enz N 84.9 2.1 4.6E-05 43.8 6.4 112 462-580 24-161 (226)
341 COG1028 FabG Dehydrogenases wi 84.9 1.5 3.3E-05 43.8 5.3 43 462-506 4-50 (251)
342 PRK08220 2,3-dihydroxybenzoate 84.8 1.2 2.5E-05 44.6 4.4 30 463-494 8-37 (252)
343 PRK06550 fabG 3-ketoacyl-(acyl 84.8 0.99 2.1E-05 44.7 3.9 30 463-494 5-34 (235)
344 cd05191 NAD_bind_amino_acid_DH 84.8 2.4 5.3E-05 36.4 5.8 64 462-552 22-86 (86)
345 TIGR01505 tartro_sem_red 2-hyd 84.6 2.6 5.5E-05 44.2 7.0 100 466-571 2-120 (291)
346 cd08294 leukotriene_B4_DH_like 84.6 3 6.6E-05 43.3 7.6 55 449-505 128-186 (329)
347 COG3967 DltE Short-chain dehyd 84.5 1.6 3.5E-05 44.8 5.2 44 464-509 6-51 (245)
348 PRK12490 6-phosphogluconate de 84.4 3.3 7.1E-05 43.8 7.8 108 465-576 2-126 (299)
349 PLN02520 bifunctional 3-dehydr 84.4 1.8 3.9E-05 49.8 6.2 44 462-508 378-423 (529)
350 TIGR01777 yfcH conserved hypot 84.3 0.79 1.7E-05 46.7 3.0 32 466-499 1-34 (292)
351 TIGR00658 orni_carb_tr ornithi 84.2 7.4 0.00016 41.8 10.4 91 406-498 61-181 (304)
352 PF01370 Epimerase: NAD depend 83.9 1.7 3.6E-05 42.8 5.0 27 466-494 1-27 (236)
353 PF01262 AlaDh_PNT_C: Alanine 83.8 2.9 6.3E-05 40.5 6.5 88 463-557 20-143 (168)
354 cd05276 p53_inducible_oxidored 83.5 2.1 4.5E-05 43.4 5.6 42 462-505 139-182 (323)
355 TIGR00872 gnd_rel 6-phosphoglu 83.0 2.4 5.2E-05 44.9 6.1 103 465-572 2-121 (298)
356 KOG0409 Predicted dehydrogenas 82.9 2.5 5.5E-05 45.5 6.1 148 440-597 15-184 (327)
357 COG0111 SerA Phosphoglycerate 82.8 2.8 6E-05 45.4 6.5 86 463-553 142-234 (324)
358 PF03807 F420_oxidored: NADP o 82.7 3 6.5E-05 35.9 5.5 43 465-510 1-49 (96)
359 PLN02996 fatty acyl-CoA reduct 82.6 2.3 5E-05 48.4 6.1 25 462-488 10-34 (491)
360 PRK11199 tyrA bifunctional cho 82.6 1.1 2.4E-05 49.1 3.5 39 457-497 92-130 (374)
361 PRK09496 trkA potassium transp 82.6 3.4 7.4E-05 45.6 7.3 39 465-506 2-42 (453)
362 PRK06300 enoyl-(acyl carrier p 82.2 2.1 4.6E-05 45.5 5.3 33 462-494 7-39 (299)
363 cd08289 MDR_yhfp_like Yhfp put 82.0 3.1 6.8E-05 43.1 6.4 54 450-505 129-189 (326)
364 PLN00016 RNA-binding protein; 81.7 1.4 3.1E-05 47.8 3.8 39 458-498 47-91 (378)
365 cd08243 quinone_oxidoreductase 81.0 4.7 0.0001 41.2 7.2 53 450-504 128-184 (320)
366 smart00822 PKS_KR This enzymat 80.7 1.8 3.9E-05 39.7 3.7 33 464-498 1-36 (180)
367 PRK10675 UDP-galactose-4-epime 80.6 1.7 3.8E-05 45.6 3.9 28 465-494 2-29 (338)
368 PRK10669 putative cation:proto 80.3 3.4 7.4E-05 47.6 6.5 41 463-506 417-459 (558)
369 COG0569 TrkA K+ transport syst 80.2 4 8.7E-05 41.7 6.3 36 464-502 1-38 (225)
370 PF03435 Saccharop_dh: Sacchar 80.2 2.4 5.2E-05 46.2 5.0 39 466-507 1-43 (386)
371 COG3268 Uncharacterized conser 80.2 1.8 3.9E-05 47.2 3.8 49 463-513 6-56 (382)
372 PRK09599 6-phosphogluconate de 79.5 5.9 0.00013 41.9 7.5 107 465-575 2-125 (301)
373 COG1090 Predicted nucleoside-d 79.1 2.7 5.9E-05 44.8 4.7 34 466-501 1-36 (297)
374 TIGR01179 galE UDP-glucose-4-e 79.1 1.9 4.1E-05 44.4 3.6 28 465-494 1-28 (328)
375 KOG1203 Predicted dehydrogenas 78.9 2.6 5.6E-05 47.2 4.7 62 442-505 57-121 (411)
376 PLN02206 UDP-glucuronate decar 78.6 2.3 4.9E-05 47.8 4.3 30 463-494 119-148 (442)
377 PRK01713 ornithine carbamoyltr 78.5 8.8 0.00019 41.8 8.6 92 406-498 68-190 (334)
378 COG0499 SAM1 S-adenosylhomocys 78.5 6.1 0.00013 43.6 7.2 154 462-621 208-388 (420)
379 cd08295 double_bond_reductase_ 78.4 5.3 0.00012 42.2 6.8 57 450-508 137-197 (338)
380 cd08270 MDR4 Medium chain dehy 78.3 3.9 8.4E-05 41.9 5.6 87 463-553 133-223 (305)
381 KOG1200 Mitochondrial/plastidi 78.3 3.6 7.8E-05 42.1 5.1 45 463-509 14-60 (256)
382 PRK10217 dTDP-glucose 4,6-dehy 78.3 2 4.4E-05 45.6 3.6 29 464-494 2-30 (355)
383 PLN02928 oxidoreductase family 78.0 5.3 0.00012 43.6 6.8 91 462-557 158-270 (347)
384 PRK07574 formate dehydrogenase 78.0 6.5 0.00014 43.7 7.5 101 462-568 191-315 (385)
385 PF02254 TrkA_N: TrkA-N domain 78.0 4.2 9.2E-05 36.1 5.1 38 466-506 1-40 (116)
386 cd08250 Mgc45594_like Mgc45594 77.9 7.2 0.00016 40.5 7.5 42 462-505 139-182 (329)
387 PLN02166 dTDP-glucose 4,6-dehy 77.7 2.7 5.8E-05 47.2 4.5 31 462-494 119-149 (436)
388 smart00859 Semialdhyde_dh Semi 77.7 6.8 0.00015 35.5 6.4 85 465-552 1-99 (122)
389 PRK08125 bifunctional UDP-gluc 77.6 4.8 0.0001 47.3 6.8 31 462-494 314-345 (660)
390 COG0190 FolD 5,10-methylene-te 77.6 4.3 9.3E-05 43.3 5.7 87 451-557 139-232 (283)
391 KOG1210 Predicted 3-ketosphing 77.6 3.1 6.7E-05 45.0 4.7 61 451-513 21-83 (331)
392 PRK12480 D-lactate dehydrogena 77.5 7.4 0.00016 42.2 7.6 85 462-557 145-242 (330)
393 PRK11908 NAD-dependent epimera 77.4 3.1 6.7E-05 44.3 4.7 38 464-503 2-42 (347)
394 PLN02572 UDP-sulfoquinovose sy 77.4 2.4 5.1E-05 47.5 4.0 30 463-494 47-76 (442)
395 PRK11559 garR tartronate semia 77.3 7.3 0.00016 40.8 7.4 88 464-557 3-101 (296)
396 PRK13243 glyoxylate reductase; 76.9 8.1 0.00018 41.8 7.8 100 462-569 149-272 (333)
397 KOG1371 UDP-glucose 4-epimeras 76.9 5.9 0.00013 43.1 6.5 75 463-552 2-85 (343)
398 PRK11150 rfaD ADP-L-glycero-D- 76.5 2.3 5.1E-05 44.2 3.4 27 466-494 2-28 (308)
399 COG0287 TyrA Prephenate dehydr 76.5 4.8 0.0001 42.8 5.7 29 463-494 3-31 (279)
400 PRK09009 C factor cell-cell si 76.4 3 6.4E-05 41.4 4.0 28 465-494 2-31 (235)
401 PTZ00142 6-phosphogluconate de 76.1 5.6 0.00012 45.3 6.5 106 464-572 2-129 (470)
402 TIGR01181 dTDP_gluc_dehyt dTDP 76.0 2.5 5.3E-05 43.4 3.4 28 465-494 1-30 (317)
403 PRK15438 erythronate-4-phospha 76.0 8.9 0.00019 42.5 7.9 86 462-557 115-215 (378)
404 TIGR01214 rmlD dTDP-4-dehydror 76.0 2.7 5.8E-05 43.0 3.7 28 465-494 1-28 (287)
405 cd08259 Zn_ADH5 Alcohol dehydr 75.6 7.1 0.00015 40.3 6.7 42 462-505 162-205 (332)
406 PRK00257 erythronate-4-phospha 75.3 10 0.00022 42.1 8.1 82 462-553 115-208 (381)
407 PLN02256 arogenate dehydrogena 75.2 7.4 0.00016 41.7 6.8 58 434-494 4-64 (304)
408 cd05280 MDR_yhdh_yhfp Yhdh and 75.2 7 0.00015 40.3 6.5 40 463-504 147-188 (325)
409 PRK00779 ornithine carbamoyltr 75.2 17 0.00038 39.0 9.6 93 405-499 64-186 (304)
410 PRK06035 3-hydroxyacyl-CoA deh 75.0 3.9 8.4E-05 43.0 4.6 39 464-505 4-44 (291)
411 PRK09260 3-hydroxybutyryl-CoA 74.6 4.5 9.7E-05 42.4 4.9 40 464-506 2-43 (288)
412 cd05195 enoyl_red enoyl reduct 74.6 10 0.00022 37.6 7.3 42 462-505 108-151 (293)
413 PRK12562 ornithine carbamoyltr 74.6 11 0.00024 41.1 8.1 162 406-571 67-278 (334)
414 TIGR01327 PGDH D-3-phosphoglyc 74.4 7.8 0.00017 44.6 7.2 102 462-569 137-261 (525)
415 PRK08293 3-hydroxybutyryl-CoA 74.4 5 0.00011 42.1 5.2 40 464-506 4-45 (287)
416 cd08293 PTGR2 Prostaglandin re 74.3 8.6 0.00019 40.4 7.0 43 464-508 156-201 (345)
417 PLN02306 hydroxypyruvate reduc 74.3 8.8 0.00019 42.6 7.3 91 462-557 164-280 (386)
418 cd08253 zeta_crystallin Zeta-c 74.0 12 0.00027 37.9 7.9 41 463-505 145-187 (325)
419 cd05288 PGDH Prostaglandin deh 73.8 8.2 0.00018 40.0 6.7 43 463-507 146-190 (329)
420 PRK07530 3-hydroxybutyryl-CoA 73.6 4.2 9.2E-05 42.6 4.5 39 464-505 5-45 (292)
421 PRK15469 ghrA bifunctional gly 73.5 7 0.00015 42.1 6.1 97 463-568 136-257 (312)
422 PRK11064 wecC UDP-N-acetyl-D-m 73.5 15 0.00032 41.1 8.8 92 463-557 3-124 (415)
423 PRK06129 3-hydroxyacyl-CoA deh 73.3 5.1 0.00011 42.5 5.0 37 465-504 4-42 (308)
424 cd03514 CrtR_beta-carotene-hyd 73.3 27 0.00058 35.3 10.0 22 239-260 167-188 (207)
425 COG1052 LdhA Lactate dehydroge 73.2 6.6 0.00014 42.6 5.9 89 463-557 146-244 (324)
426 cd08288 MDR_yhdh Yhdh putative 73.2 9.4 0.0002 39.5 6.9 41 462-504 146-188 (324)
427 PLN02858 fructose-bisphosphate 73.0 8.9 0.00019 49.2 7.8 179 386-576 234-452 (1378)
428 PRK09424 pntA NAD(P) transhydr 72.9 10 0.00022 43.8 7.5 88 462-555 164-287 (509)
429 PRK15057 UDP-glucose 6-dehydro 72.9 9.3 0.0002 42.4 7.1 123 465-595 2-162 (388)
430 PRK12491 pyrroline-5-carboxyla 72.5 11 0.00024 39.6 7.2 42 464-508 3-50 (272)
431 COG1484 DnaC DNA replication p 72.1 11 0.00024 39.4 7.0 67 442-509 81-154 (254)
432 KOG1207 Diacetyl reductase/L-x 71.8 5.8 0.00012 40.0 4.6 44 464-509 8-53 (245)
433 PF02558 ApbA: Ketopantoate re 71.7 6.1 0.00013 36.8 4.6 37 466-506 1-39 (151)
434 PRK02102 ornithine carbamoyltr 71.7 23 0.00049 38.7 9.5 96 399-498 64-189 (331)
435 PRK09987 dTDP-4-dehydrorhamnos 71.5 3.7 8E-05 43.1 3.4 27 465-494 2-28 (299)
436 PRK02255 putrescine carbamoylt 71.4 23 0.00051 38.7 9.6 87 406-494 64-183 (338)
437 PRK00856 pyrB aspartate carbam 71.4 25 0.00054 37.9 9.7 157 399-571 63-265 (305)
438 TIGR01751 crot-CoA-red crotony 71.3 8.6 0.00019 41.9 6.3 41 463-505 190-232 (398)
439 PRK07578 short chain dehydroge 71.0 4.5 9.8E-05 39.2 3.7 27 465-494 2-28 (199)
440 PRK06522 2-dehydropantoate 2-r 71.0 6.4 0.00014 40.9 5.0 39 465-506 2-42 (304)
441 smart00829 PKS_ER Enoylreducta 71.0 11 0.00024 37.3 6.7 40 463-504 105-146 (288)
442 PF01113 DapB_N: Dihydrodipico 70.9 6.6 0.00014 36.3 4.6 28 465-494 2-30 (124)
443 PRK07502 cyclohexadienyl dehyd 70.5 15 0.00033 38.9 7.8 86 464-555 7-103 (307)
444 PRK07417 arogenate dehydrogena 70.3 6.5 0.00014 41.1 4.9 39 465-506 2-42 (279)
445 TIGR02197 heptose_epim ADP-L-g 70.2 4.3 9.3E-05 41.9 3.5 27 466-494 1-28 (314)
446 PRK07364 2-octaprenyl-6-methox 70.1 3.4 7.3E-05 44.9 2.8 30 462-494 17-46 (415)
447 TIGR02825 B4_12hDH leukotriene 69.9 10 0.00022 39.7 6.3 42 462-505 138-181 (325)
448 PRK00066 ldh L-lactate dehydro 69.5 7.2 0.00016 41.9 5.2 43 461-506 4-50 (315)
449 PRK07819 3-hydroxybutyryl-CoA 69.5 6.6 0.00014 41.5 4.8 36 464-502 6-43 (286)
450 PRK11891 aspartate carbamoyltr 69.5 30 0.00065 39.1 10.1 99 399-500 144-279 (429)
451 TIGR02823 oxido_YhdH putative 69.5 11 0.00024 39.0 6.5 44 459-504 142-187 (323)
452 PRK13771 putative alcohol dehy 69.4 15 0.00033 38.3 7.5 54 450-505 149-205 (334)
453 COG0686 Ald Alanine dehydrogen 69.2 9 0.0002 41.7 5.6 118 423-570 150-293 (371)
454 TIGR02817 adh_fam_1 zinc-bindi 68.8 11 0.00024 39.3 6.3 40 463-504 149-191 (336)
455 COG2130 Putative NADP-dependen 68.7 11 0.00024 40.9 6.1 113 361-509 80-197 (340)
456 PRK03562 glutathione-regulated 68.6 6.3 0.00014 46.3 4.9 45 459-506 396-442 (621)
457 KOG0068 D-3-phosphoglycerate d 68.5 20 0.00043 39.5 8.0 143 402-560 62-248 (406)
458 PF04321 RmlD_sub_bind: RmlD s 68.4 6.5 0.00014 41.3 4.4 28 465-494 2-29 (286)
459 TIGR00873 gnd 6-phosphoglucona 68.2 7 0.00015 44.5 5.0 108 465-575 1-129 (467)
460 KOG4169 15-hydroxyprostaglandi 68.0 6.4 0.00014 41.1 4.1 44 463-508 5-53 (261)
461 cd08268 MDR2 Medium chain dehy 68.0 13 0.00029 37.8 6.5 40 463-504 145-186 (328)
462 PRK15409 bifunctional glyoxyla 67.8 14 0.0003 40.0 6.9 101 462-568 144-267 (323)
463 PRK05579 bifunctional phosphop 67.7 5.9 0.00013 44.2 4.2 95 374-494 117-233 (399)
464 TIGR01724 hmd_rel H2-forming N 67.5 12 0.00026 40.9 6.2 77 478-557 32-121 (341)
465 PRK04148 hypothetical protein; 67.4 15 0.00032 35.1 6.2 68 456-527 9-81 (134)
466 PRK06130 3-hydroxybutyryl-CoA 67.4 8.7 0.00019 40.6 5.2 40 464-506 5-46 (311)
467 cd08292 ETR_like_2 2-enoyl thi 67.2 10 0.00023 39.1 5.7 88 462-552 139-238 (324)
468 COG2084 MmsB 3-hydroxyisobutyr 67.2 9.1 0.0002 41.0 5.2 106 465-575 2-126 (286)
469 KOG1478 3-keto sterol reductas 67.1 7.1 0.00015 41.4 4.3 94 464-575 4-104 (341)
470 KOG1298 Squalene monooxygenase 66.8 8.2 0.00018 43.1 4.9 46 458-506 40-87 (509)
471 PLN02503 fatty acyl-CoA reduct 66.8 12 0.00025 44.2 6.4 26 462-489 118-143 (605)
472 PLN02342 ornithine carbamoyltr 66.6 77 0.0017 35.0 12.3 93 406-500 107-229 (348)
473 cd08241 QOR1 Quinone oxidoredu 66.4 23 0.0005 35.9 7.9 42 462-505 139-182 (323)
474 PLN02260 probable rhamnose bio 66.3 8.2 0.00018 45.3 5.2 30 463-494 380-409 (668)
475 PLN02545 3-hydroxybutyryl-CoA 66.3 8.6 0.00019 40.4 4.9 36 464-502 5-42 (295)
476 PF00899 ThiF: ThiF family; I 66.1 5.8 0.00013 36.8 3.2 36 463-501 2-38 (135)
477 PRK00141 murD UDP-N-acetylmura 65.8 13 0.00029 42.0 6.6 36 456-494 7-43 (473)
478 cd03510 Rhizobitoxine-FADS-lik 65.6 22 0.00049 34.9 7.3 83 155-257 72-162 (175)
479 PLN02712 arogenate dehydrogena 64.3 12 0.00026 44.5 6.0 30 462-494 368-397 (667)
480 PRK10084 dTDP-glucose 4,6 dehy 64.3 6.3 0.00014 41.8 3.4 27 465-493 2-28 (352)
481 TIGR03026 NDP-sugDHase nucleot 64.2 23 0.00051 39.1 8.0 39 465-506 2-42 (411)
482 KOG1600 Fatty acid desaturase 64.0 6.3 0.00014 42.6 3.3 22 89-110 34-55 (321)
483 PRK08268 3-hydroxy-acyl-CoA de 63.9 11 0.00023 43.4 5.4 39 462-503 6-46 (507)
484 cd05282 ETR_like 2-enoyl thioe 63.5 16 0.00035 37.6 6.2 41 462-504 138-180 (323)
485 COG1184 GCD2 Translation initi 63.4 23 0.00051 38.2 7.4 52 441-494 121-175 (301)
486 KOG1196 Predicted NAD-dependen 63.4 17 0.00037 39.4 6.3 67 442-510 131-201 (343)
487 PRK07679 pyrroline-5-carboxyla 63.3 9.9 0.00021 39.7 4.6 41 465-508 5-52 (279)
488 cd05286 QOR2 Quinone oxidoredu 63.0 32 0.00069 34.7 8.2 41 463-505 137-179 (320)
489 PRK08605 D-lactate dehydrogena 62.6 21 0.00046 38.6 7.1 85 462-553 145-237 (332)
490 PRK13581 D-3-phosphoglycerate 62.6 19 0.00041 41.5 7.1 85 462-553 139-231 (526)
491 PRK14620 NAD(P)H-dependent gly 62.6 12 0.00025 39.9 5.1 39 465-506 2-42 (326)
492 PLN02350 phosphogluconate dehy 62.5 9.3 0.0002 43.8 4.5 111 462-576 5-139 (493)
493 KOG2380 Prephenate dehydrogena 62.4 6.3 0.00014 43.3 2.9 146 427-576 13-174 (480)
494 PLN02712 arogenate dehydrogena 62.3 11 0.00024 44.7 5.3 106 463-575 52-173 (667)
495 PF07993 NAD_binding_4: Male s 62.2 16 0.00035 37.2 5.9 39 468-508 1-46 (249)
496 TIGR01692 HIBADH 3-hydroxyisob 62.0 17 0.00037 38.1 6.1 96 476-574 6-120 (288)
497 PRK00094 gpsA NAD(P)H-dependen 61.8 13 0.00027 39.2 5.1 39 465-506 3-43 (325)
498 cd08244 MDR_enoyl_red Possible 61.6 21 0.00046 36.8 6.7 89 462-553 142-242 (324)
499 TIGR00670 asp_carb_tr aspartat 61.6 78 0.0017 34.1 11.1 95 406-500 61-187 (301)
500 cd05291 HicDH_like L-2-hydroxy 61.5 11 0.00023 40.2 4.6 41 464-507 1-45 (306)
No 1
>PLN02869 fatty aldehyde decarbonylase
Probab=100.00 E-value=3.8e-199 Score=1622.45 Aligned_cols=617 Identities=72% Similarity=1.276 Sum_probs=592.9
Q ss_pred CCCCCCCCCCCCCCCCCCccEEeehHHHhhhhhhhhcCccccccccchhHHHHHHHHHHHHhHHHHHhhchhhHhcCcCC
Q 006623 1 MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIV 80 (638)
Q Consensus 1 ~~~~~~~l~~wpw~~lg~~ky~~~~P~v~~~~~~~~~~~~~~~~~~~~~il~~~~lRyl~~~~wi~~~~~~~~~~k~KIq 80 (638)
||++||+||+|||++||||||++|+|+|++++|++.++++++.|+.|+++++++++|++++|+|++++|++++++|+||+
T Consensus 1 ma~~pg~lt~wpW~~lG~~Ky~~~~p~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~l~~q~W~s~sr~~~~~~~~ri~ 80 (620)
T PLN02869 1 MASKPGILTDWPWKPLGSFKYVVLAPWVIHSIYSFVVKDEKERDLSYFLIFPFLLWRMLHNQLWISLSRYRTAKGNNRIV 80 (620)
T ss_pred CCCCCcccccCcccccCCeeeeeehHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhceeee
Confidence 99999999999999999999999999999999999988777767789999999999999999999999999999999999
Q ss_pred CCCCcccchhhhhcchhhHHHHHHHHHHHHhhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhcc
Q 006623 81 DKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYH 160 (638)
Q Consensus 81 ~~~~~~~qvdrE~~~~n~iIl~~li~~~~~~~~P~~~~~lP~W~~~g~i~~lll~~lv~Df~~Yw~HRllH~~~Ly~r~H 160 (638)
+++++|+|+|||++||||+|+++++++++++.+| ..+.+|.|++.|++..+++|+++.|++|||+||++|++++||++|
T Consensus 81 ~~~i~f~QvDre~~wDd~iil~~l~~~~~~~~~p-~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~H 159 (620)
T PLN02869 81 DKGIEFEQVDRERNWDDQILFNGILFYVGYMILP-GASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYH 159 (620)
T ss_pred ccCCCceeeccccccchHHHHHHHHHHHHHHhhh-hhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 9999999999999999999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred ccCccCcCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhccCCceecccccccccCCcc
Q 006623 161 SHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 240 (638)
Q Consensus 161 kvHHss~~p~~~ta~~~hplE~ll~~~~f~iPll~~~llg~~s~~~i~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~ 240 (638)
++||++.+|+|+++..+++.|++.+.+++.+|+++..+++..|+.++++|+++.+++++++|||+|++|+++++.+|+++
T Consensus 160 kvHHss~~~~P~Ts~~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLk 239 (620)
T PLN02869 160 SHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLK 239 (620)
T ss_pred hhccCCCCCCchhhhcCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcch
Confidence 99999999999998754445778777778899988777777789999999999999999999999999999988889999
Q ss_pred cccCCchhhhhhhcCCCCCcCCCchhhhhhcCCCCCCCchHHHHHhhcCCccccccCCCCceeeecccCCccccccccch
Q 006623 241 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIG 320 (638)
Q Consensus 241 ~li~tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~~~~~~~~~~~~~~~~~~~~~~~pd~v~l~H~~~~~s~~h~~~~ 320 (638)
|+++||++|++||+++++|||++|++||++|||+++++|+++|+... +.++ +||||||||+||++|+||+|||
T Consensus 240 yll~TPsfHdlHHs~fd~NYGlfF~~WDrLFGT~d~~s~~l~e~~~~--~~~~-----~pd~V~l~H~t~~~s~~h~~~~ 312 (620)
T PLN02869 240 YLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLK--RPEE-----IPDVVHLTHLTTPDSIYHLRLG 312 (620)
T ss_pred heecCchHHhHHhccCCcCcccchHHHHhccCCCCCCchhHHHHhhc--Cccc-----CCCEEEEeccCCHHHhhccchH
Confidence 99999999999999999999999999999999999999999999987 4344 9999999999999999999999
Q ss_pred hhhhccCCccccccCcchhccchhhHHHHHHHHHHHHhcceEEEeecccCcccceeEEeeccCcccccchhhHHHHHHHH
Q 006623 321 FASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIE 400 (638)
Q Consensus 321 ~~~~~s~p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~I~ 400 (638)
|||+||+||+ ++||||||||+|+++|+++ |+|||||++|+|+|||+++|||+||||||||++|+++|+||++||
T Consensus 313 ~~s~as~p~~-----~~~~l~~~wp~~~~~m~~~-w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie 386 (620)
T PLN02869 313 FASLASKPYI-----SKWYLRLMWPVTSWSMMLT-WIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIE 386 (620)
T ss_pred HHHhccCCcc-----chhHHHHHHHHHHHHHHHH-HHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHH
Confidence 9999999999 9999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHH
Q 006623 401 EAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 480 (638)
Q Consensus 401 ~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~a 480 (638)
+||++|||+||||+|||+|||+|+|||+|++||+|||+ ||||||||||||||||+|+||++++|||++|||+ |||||
T Consensus 387 ~ail~ad~~Gvkv~sLg~LNk~~~LN~~G~l~v~k~p~-L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~s--K~~ra 463 (620)
T PLN02869 387 EAILEADKRGVKVLSLGLLNQGEELNRYGELYIHRNPK-LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS--KVAYF 463 (620)
T ss_pred HHHHHHHhcCCEEEechhcchhhhhcCCceEeeecCCC-cceEEEeCCchHHHHHHHhcCCCCceEEEecCcc--HHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999996 99999
Q ss_pred HHHHHhccCcEEEecchhhHHHHHhhCCc-chhchhhhccccccceEEEeecCcCChhhhhcCCCCceeecccccCCcCC
Q 006623 481 VASSLCQMGIKVATICKDDYEKLKLRIPV-EAQHNLVLSTSYAAHKTIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKL 559 (638)
Q Consensus 481 va~~L~~~~~~v~~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~~~~i~w~vg~~~~~~~q~~a~~G~~f~~~~~~~~~~~ 559 (638)
||.+||||||||++.++|||++||+|++. +++++|+++|++ ..|+ |+|||+++++||++|||||+||||||+|+++.
T Consensus 464 ia~~lc~r~i~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~k~-w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~~ 541 (620)
T PLN02869 464 IASALCQRGIQVATFREDEYEKLNKKLPNTECGSKLLLSKNY-SEKI-WLVGDGLTEEEQKKASKGTLFIPFSQFPPKRL 541 (620)
T ss_pred HHHHHHhcCCeEeecCHHHHHHHHHhccchhhhhhEEEeecc-Ccee-EEecCCCCHHHHhhCCCCCeecccccCCchhh
Confidence 99999999999666899999999999988 899999999987 5699 79999999999999999999999999999999
Q ss_pred CCCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchh-hhhHHHHHHHHHhcCCccCCCC
Q 006623 560 RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQT-MCDIHQVWHASLRHGFRPLFPV 637 (638)
Q Consensus 560 R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~~e~G~i-v~~i~~i~~aa~kHGF~p~~~~ 637 (638)
||||+|+++|||++|+++||++|||||||||+|+||||||||||||||++|||| | |++||++|+||+||||+|+...
T Consensus 542 R~dC~Y~~~pam~~p~~~~~~~sce~~l~r~v~~a~~~~givh~legw~~he~g-~~v~~id~~W~aal~hgf~p~~~~ 619 (620)
T PLN02869 542 RKDCFYHTTPAMMSPKSFENVDSCENWLPRRAMSAWRVAGILHALEGWNVHECG-YTMFDIEKIWEASLQHGFRPLLIP 619 (620)
T ss_pred hccccccCCccccCChhhcccchhhccccchhhhHhhhcceeeeecCccccccc-cccccHHHHHHHHHHcCCccCCCC
Confidence 999999999999999999999999999999999999999999999999999999 8 9999999999999999998754
No 2
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=100.00 E-value=1.3e-66 Score=490.29 Aligned_cols=164 Identities=62% Similarity=1.112 Sum_probs=159.8
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEeecCcCChhhhhcCCCC
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGDDLTGKEQARAPKG 545 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~~~q~~a~~G 545 (638)
|||+|+++ |||||||.+|||||+||+|.++|+|++||++++.+++.||+++++|++ |+ |+|||+||++||++||||
T Consensus 1 V~L~G~~s--KvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~~~~~~~~Lv~~~~~~~-K~-WlVGd~l~~~EQ~~Ap~G 76 (164)
T PF12076_consen 1 VFLTGNTS--KVARAIALALCRRGVQVVMLSKERYESLKSEAPEECQSNLVQSTSYQA-KT-WLVGDGLTEEEQKWAPKG 76 (164)
T ss_pred Ceeccccc--HHHHHHHHHHHhcCCEEEEecHHHHHHHHHHcCHHhhccEEeecCCCc-ee-EEeCCCCCHHHHhcCCCC
Confidence 79999995 999999999999999999999999999999999999999999999877 89 799999999999999999
Q ss_pred ceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchhhhhHHHHHHH
Q 006623 546 TIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHA 625 (638)
Q Consensus 546 ~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~~e~G~iv~~i~~i~~a 625 (638)
|+|||||||||+++||||+|+++|||++|++++|+||||||||||+||||||||||||||||++||||.-|++||++|+|
T Consensus 77 t~FipfsqfP~~~~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG~~v~~idkvW~A 156 (164)
T PF12076_consen 77 THFIPFSQFPPKKVRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECGDDVDRIDKVWEA 156 (164)
T ss_pred CEEeeccCCCcHHHhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccCcccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999438999999999
Q ss_pred HHhcCCcc
Q 006623 626 SLRHGFRP 633 (638)
Q Consensus 626 a~kHGF~p 633 (638)
|++|||+|
T Consensus 157 Al~HGF~P 164 (164)
T PF12076_consen 157 ALKHGFRP 164 (164)
T ss_pred HHHcCCCC
Confidence 99999998
No 3
>PRK14982 acyl-ACP reductase; Provisional
Probab=100.00 E-value=6.7e-37 Score=324.93 Aligned_cols=267 Identities=15% Similarity=0.183 Sum_probs=207.6
Q ss_pred HhcceEEEeecccCcc---cceeEEe--eccCcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCce
Q 006623 357 IYGRTFVSESNTLDKL---KLQTWVV--PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI 431 (638)
Q Consensus 357 ~~~~~f~~~~~~~~~~---~~~~w~~--pr~~~~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~ 431 (638)
....+|++++-.++-- ...-|.| |-.+=|- ...+.|.+.++|++|+..|+|.|++|++||++++ +.+++ .
T Consensus 35 ~~~~p~~~~~~~v~S~~g~~~eg~~i~~~~~pe~l-~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~ts---iv~~~-~ 109 (340)
T PRK14982 35 CSAPPQLVDHIEVTSATGQTIEGKYIESCFLPEML-SNRRFKTARRKVLNAMALAQKKGINITALGGFSS---IIFEN-F 109 (340)
T ss_pred hhCCCeEeeeEEEEeCCCCEEEEEEEeCCCCHHHH-hccChHHHHHHHHHHHHHHHHCCCeEEEcCChHH---HhcCC-c
Confidence 3346899999888544 4467776 3333233 4445666666799999999999999999999999 66555 3
Q ss_pred eeecCCC--Ccce---eeecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhc-cCc-EEEe-
Q 006623 432 YLERQPN--KLKI---KVVDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQ-MGI-KVAT- 494 (638)
Q Consensus 432 ~~~k~p~--~L~i---rvv~Gnsltaavv~~~ip~---------~~~~V~~~Gatg~~kig~ava~~L~~-~~~-~v~~- 494 (638)
.+.++.+ .++| +|||||||||++.++++.. ..++|+|+||+| +||+.+|+.|++ .|+ ++++
T Consensus 110 ~~~~~~~~r~i~ie~~~~TtGNs~T~~ll~~~V~la~~~lg~~l~~k~VLVtGAtG--~IGs~lar~L~~~~gv~~lilv 187 (340)
T PRK14982 110 NLLQHKQVRNTTLEWERFTTGNTHTAYVICRQVEQNAPRLGIDLSKATVAVVGATG--DIGSAVCRWLDAKTGVAELLLV 187 (340)
T ss_pred ccccccccccceeccccccCCchhHHHHHHHHHHHhHHHhccCcCCCEEEEEccCh--HHHHHHHHHHHhhCCCCEEEEE
Confidence 3332211 1555 8999999999999998865 368999999999 999999999985 454 6666
Q ss_pred -cchhhHHHHHhhCCcchhchhhhccccccceEEEeecC----cCChhhhhcCCCCceeecccccCCc----CCCCCcee
Q 006623 495 -ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGD----DLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFY 565 (638)
Q Consensus 495 -~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~dc~y 565 (638)
|++++++.++.++..+...++.+.. .+++.|+++.+. .+++++. ++|.++||.+ +|+. --|+|+.+
T Consensus 188 ~R~~~rl~~La~el~~~~i~~l~~~l-~~aDiVv~~ts~~~~~~I~~~~l---~~~~~viDiA-vPRDVd~~v~~~~V~v 262 (340)
T PRK14982 188 ARQQERLQELQAELGGGKILSLEEAL-PEADIVVWVASMPKGVEIDPETL---KKPCLMIDGG-YPKNLDTKVQGPGIHV 262 (340)
T ss_pred cCCHHHHHHHHHHhccccHHhHHHHH-ccCCEEEECCcCCcCCcCCHHHh---CCCeEEEEec-CCCCCCcccCCCCEEE
Confidence 8888999999887644433333222 134444456654 5888877 7999999999 5555 33599999
Q ss_pred ecCCccccCCCCc-cc-cccccccCcchhHHHHHhhhhhhhcCCCCC-ccch--h-hhhHHHHHHHHHhcCCccCC
Q 006623 566 HSTPAMIIPPSLS-NM-HSCENWLGRRVMSAWRIAGIIHALEGWDLN-ECGQ--T-MCDIHQVWHASLRHGFRPLF 635 (638)
Q Consensus 566 ~~~~a~~~P~~~~-~~-~~~e~~~p~~~~~Ac~a~~~v~alEgw~~~-e~G~--i-v~~i~~i~~aa~kHGF~p~~ 635 (638)
.+++.+++|.+++ ++ ...|+++|+|+++||+||+||++||||++| ++|| | +++|++|.++|+||||+|+-
T Consensus 263 ~~gG~V~~p~~vd~~l~~~v~~~~~~r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~~ 338 (340)
T PRK14982 263 LKGGIVEHSLDIDWKIMEIAEMDNPQRQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPLL 338 (340)
T ss_pred EeCCccccCCCcCccHHHHHhccchhhHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCcccc
Confidence 9999999999987 43 346789999999999999999999999999 5997 8 99999999999999999964
No 4
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=100.00 E-value=3.3e-37 Score=311.72 Aligned_cols=236 Identities=19% Similarity=0.190 Sum_probs=193.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCc-eeeecCCCCcc-eeeecCChhHHHHHHhcCcC----
Q 006623 388 LPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGE-IYLERQPNKLK-IKVVDGSSLAAAVVVNSLPK---- 461 (638)
Q Consensus 388 ~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~-~~~~k~p~~L~-irvv~Gnsltaavv~~~ip~---- 461 (638)
+-++.|++.|.+.+|++.|+|.|++|++||+|++ +.++-+ ....|+|+ +. +|+|||||+||+++|.++.+
T Consensus 85 ~~s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e-~t~~~~ttgns~Tayaa~r~Vl~~~~~ 160 (351)
T COG5322 85 LRSRPKAATRRVLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVE-LTFTRFTTGNSHTAYAACRQVLKHFAQ 160 (351)
T ss_pred HhhCHHHHHHHHHHHHHHHHHcCCeEEeecchhh---hhccccccccccceE-EEEEecccCCccchHHHHHHHHHHHHH
Confidence 3456889999999999999999999999999999 666433 44569999 88 99999999999999999977
Q ss_pred -----CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe------cchhhHHHHHhhCCcchhchhhhccccccceEEEe
Q 006623 462 -----TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT------ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWL 529 (638)
Q Consensus 462 -----~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~------~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~ 529 (638)
.+++|.+||||| +||++||++|+ +-++++++ ++++++..||+++..+...++.... +++++++|+
T Consensus 161 lGidlsqatvaivGa~G--~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~-~~e~i~v~v 237 (351)
T COG5322 161 LGIDLSQATVAIVGATG--DIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYAL-PQEDILVWV 237 (351)
T ss_pred hCcCHHHCeEEEecCCc--hHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeeccccc-cccceEEEE
Confidence 488999999999 99999999999 77777777 6777888999998888877754333 677777788
Q ss_pred e----cCcCChhhhhcCCCCceeecccc---cCCc-CCCCCceeecCCccccCCC--CccccccccccCcchhHHHHHhh
Q 006623 530 V----GDDLTGKEQARAPKGTIFIPYTQ---IPPR-KLRKDCFYHSTPAMIIPPS--LSNMHSCENWLGRRVMSAWRIAG 599 (638)
Q Consensus 530 v----g~~~~~~~q~~a~~G~~f~~~~~---~~~~-~~R~dc~y~~~~a~~~P~~--~~~~~~~e~~~p~~~~~Ac~a~~ 599 (638)
+ |-.|.|+.+ +||...+|=.. +++. +-|.|+..++++.+.-|.+ |..+...+| |.|+++||.||+
T Consensus 238 As~~~g~~I~pq~l---kpg~~ivD~g~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~~~~~--p~~~l~aClAEt 312 (351)
T COG5322 238 ASMPKGVEIFPQHL---KPGCLIVDGGYPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMKIVGM--PVRQLFACLAET 312 (351)
T ss_pred eecCCCceechhhc---cCCeEEEcCCcCcccccccccCCCeEEecCccccCccccchhHHHHccc--chhhHHHHHHHH
Confidence 7 444566555 67777666652 3333 4446677777777777775 565554444 999999999999
Q ss_pred hhhhhcCCCCC-ccch-h-hhhHHHHHHHHHhcCCccCC
Q 006623 600 IIHALEGWDLN-ECGQ-T-MCDIHQVWHASLRHGFRPLF 635 (638)
Q Consensus 600 ~v~alEgw~~~-e~G~-i-v~~i~~i~~aa~kHGF~p~~ 635 (638)
+|+++|||++| +||| | +|||++|.++|.||||+|+.
T Consensus 313 lil~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~~ 351 (351)
T COG5322 313 LILEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPLD 351 (351)
T ss_pred HHHHhcchhhhccccccccHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999 5999 8 99999999999999999964
No 5
>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]
Probab=100.00 E-value=4.9e-33 Score=284.21 Aligned_cols=215 Identities=19% Similarity=0.247 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHhHHHHHh--hchhhHhcCcCCCCCCcccchhhhhcch-----hhHHHHHHHHHHHHhhcC-C---CCC
Q 006623 50 IFPFLLLRMLHDQIWISLS--RYRTAKRNNRIVDKAIEFDQVDRERNWD-----DQIVFNGLIFYIVRMLIP-P---SYS 118 (638)
Q Consensus 50 il~~~~lRyl~~~~wi~~~--~~~~~~~k~KIq~~~~~~~qvdrE~~~~-----n~iIl~~li~~~~~~~~P-~---~~~ 118 (638)
++...+.-++.+.+|+.++ +.+++++|||||+++.+ ..++.+++. ||++++.++..+.+...+ . ...
T Consensus 35 ~~~~~~~y~l~~lpf~~iD~t~~~~~~~rYKIQp~k~~--s~~~~~kc~k~vl~n~~~v~~p~~~~~y~~~~~~~~~~~~ 112 (283)
T KOG0873|consen 35 FIVHELVYWLFCLPFIFIDVTNRPPFLRRYKIQPKKNP--SLSKQLKCLKVVLLNHFLVVLPLTLVSYPFVEWFGLPSGA 112 (283)
T ss_pred HHHHHHHHHHhcchheEeecccCcchhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHhHHHHHHhCCCcCC
Confidence 4455555555566666544 46889999999998765 344445543 777777777666654432 1 224
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhccccCccCcCCCchhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 006623 119 NLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMV 198 (638)
Q Consensus 119 ~lP~W~~~g~i~~lll~~lv~Df~~Yw~HRllH~~~Ly~r~HkvHHss~~p~~~ta~~~hplE~ll~~~~f~iPll~~~l 198 (638)
.+|.|.+ ++.++++|++++|+.+||.||++|++++||.+||+||++.+|.+.+|.|+||+|+++.++ .|+++..+
T Consensus 113 plPt~~~--~l~~l~i~~liEd~~fY~~HRL~H~~~~Yk~iHKvHHe~taPf~~sa~YaHp~E~~~lg~---~~~~~p~~ 187 (283)
T KOG0873|consen 113 PLPSWKE--MLAQLVVFFLIEDIGFYWSHRLFHHKWLYKYIHKVHHEYTAPFGLSAEYAHPLEHLFLGL---GTVMGPAL 187 (283)
T ss_pred CCCcHHH--HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhhhhcccCchhHhhhhcCHHHHHHcCC---hhhhhhHH
Confidence 4677765 999999999999999999999999999999999999999999999999999999998875 23333333
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcCCCCCcCCCchhhhhhcCCCCCC
Q 006623 199 LKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRS 277 (638)
Q Consensus 199 lg~~s~~~i~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~ 277 (638)
++. |+.+.++|+++..+.++..||||++ |+.+.+.+|+. .+.++||+||..+.+||+..|+.||+|+||+...
T Consensus 188 ~~~-H~~t~wiw~~l~i~~t~~~HsGY~f-Pwsl~~~~pfy----~ga~~HD~HH~~f~~n~~~~f~~~D~i~GTd~~~ 260 (283)
T KOG0873|consen 188 LCG-HVITLWIWIALRILETVESHSGYDF-PWSLSKLIPFY----GGAEHHDYHHLVFIGNFASVFGYLDRIHGTDSTY 260 (283)
T ss_pred hhh-HHHHHHHHHHHHHHHHhhccCCCCC-CccccccCccc----CCCcccchhhhhccccccchhHHHHHHhccCccH
Confidence 333 8999999999999999999999997 99988888863 5899999999999999999999999999997643
No 6
>COG3000 ERG3 Sterol desaturase [Lipid metabolism]
Probab=99.94 E-value=9e-27 Score=241.26 Aligned_cols=152 Identities=27% Similarity=0.437 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhccccCccCcCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 006623 127 GVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIAS 206 (638)
Q Consensus 127 g~i~~lll~~lv~Df~~Yw~HRllH~~~Ly~r~HkvHHss~~p~~~ta~~~hplE~ll~~~~f~iPll~~~llg~~s~~~ 206 (638)
.+++++++.+++.|+.+||.||++|+.++||++|++||++.+|+++++.+.||+|.++......+|+.++ + .+..+
T Consensus 94 ~~~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l~---~-~~~~~ 169 (271)
T COG3000 94 PFALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLLL---G-LSPVA 169 (271)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCcccCCchhhhhcChHHHHHHHHHHHHHHHHh---c-CCHHH
Confidence 3577888888899999999999999999999999999999999999999999999999877666666542 3 56777
Q ss_pred HHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcCC--CCCcCCCchhhhhhcCCCCCCCchHHHH
Q 006623 207 FVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQF--RTNYSLFMPIYDYIYGTIDRSSDSVYEK 284 (638)
Q Consensus 207 i~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~~--~~NYG~~f~~WDrLFGT~~~~~~~~~~~ 284 (638)
+..+.++..+.+.++|||++. | + .++++++++.+|++|++||+++ ++|||.++++|||+|||+.++.++..++
T Consensus 170 ~~~~~~~~~~~~~~~H~~~~~-~-~---~~~~~~~v~~~p~~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~ 244 (271)
T COG3000 170 VALLFIFLLFWAVLIHSNLDL-P-L---PLGWLRYVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDK 244 (271)
T ss_pred HHHHHHHHHHHHHHHhcCccc-c-C---CcccceeeecCchHHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCccc
Confidence 777888888999999999996 4 2 1345666789999999999997 4999999999999999999998887777
Q ss_pred Hhh
Q 006623 285 SLK 287 (638)
Q Consensus 285 ~~~ 287 (638)
++.
T Consensus 245 ~~~ 247 (271)
T COG3000 245 IGV 247 (271)
T ss_pred ccc
Confidence 664
No 7
>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]
Probab=99.91 E-value=1.3e-24 Score=219.80 Aligned_cols=144 Identities=20% Similarity=0.362 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhccccCccCcCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 006623 126 DGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIA 205 (638)
Q Consensus 126 ~g~i~~lll~~lv~Df~~Yw~HRllH~~~Ly~r~HkvHHss~~p~~~ta~~~hplE~ll~~~~f~iPll~~~llg~~s~~ 205 (638)
...++.+++++++.||.+||.||.+|++.+||+.|+.||.+...+|+++.++||++.+++++ |-.+..+..+.|..
T Consensus 126 ~~~~~~i~~flfF~Df~iYw~HR~lH~~~vy~~LH~~HH~~~~~tpfAslafhpidg~lqai----p~~I~~Fi~Plh~~ 201 (312)
T KOG0872|consen 126 FLLFVSIFLFLFFTDFGIYWAHRELHHRGVYKRLHKPHHIWNICTPFASLAFHPIDGFLQAI----PYHIYPFIFPLHKV 201 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhcchhhhhhccCchhhhhcCcchhHhhhc----hhHheeeeecchHH
Confidence 34778888889999999999999999999999999999999999999999999999998864 33333223334556
Q ss_pred HHHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcCCCCCcCCCchhhhhhcCCCCCCCchHHH
Q 006623 206 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYE 283 (638)
Q Consensus 206 ~i~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~~~~~~~ 283 (638)
+.++...+..+++.+.|.|.-. -+.+.++||.+|..||..++.|||.++.+|||+|||+..+.++.++
T Consensus 202 t~L~l~~f~~iwt~~IHd~~~~----------~l~~~ingaahHtvHH~~f~~NYG~~tilwDrmfgSfr~p~~~~~d 269 (312)
T KOG0872|consen 202 TYLSLFTFVNIWTISIHDGIYG----------SLNPPINGAAHHTVHHTYFDYNYGQYTILWDRMFGSFRAPDHEDFD 269 (312)
T ss_pred HHHHHHHHHHhHheeeeccccc----------cccCccccccccceeeeeEecCCCcEEEeHHhccCcccCccccccc
Confidence 6555666678899999998652 1344578999999999999999999999999999999988876555
No 8
>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]
Probab=99.83 E-value=1.4e-21 Score=192.55 Aligned_cols=147 Identities=20% Similarity=0.360 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-HhhhhhhccccCccCcCCCchhhhhhhhHHHHHHHHH-HHHHHHHHHHhhhhhHH
Q 006623 128 VILTILVHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL-FAIPLVTTMVLKNASIA 205 (638)
Q Consensus 128 ~i~~lll~~lv~Df~~Yw~HRllH-~~~Ly~r~HkvHHss~~p~~~ta~~~hplE~ll~~~~-f~iPll~~~llg~~s~~ 205 (638)
...+++..+++.|.+.|++||.|| .+.||+.+|++||+-.+|.+..|.|.||+|.++...+ .++..+ +.| .++-
T Consensus 122 ~A~q~f~aflviDtWQYF~HRymH~NK~LYk~iHs~HHrL~VPYayGALyNhP~EGllLDT~G~gla~l---~sg-lspr 197 (287)
T KOG0874|consen 122 LARQFFAAFLVIDTWQYFLHRYMHMNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGGLAFL---LSG-LSPR 197 (287)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhceeEecchhhhhhhcCcchhhhhhhhchHHHHH---HcC-CCcc
Confidence 356677788889999999999999 7889999999999999999999999999999977542 112221 123 2333
Q ss_pred HHHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcC--CCCCcCC-CchhhhhhcCCCCCCCchHH
Q 006623 206 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYSL-FMPIYDYIYGTIDRSSDSVY 282 (638)
Q Consensus 206 ~i~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~--~~~NYG~-~f~~WDrLFGT~~~~~~~~~ 282 (638)
+.+++..+.++-++.+||||-+ |..+++.+ +-+.+.+||+||.. .++||+. +|++||+++||+.+.+.|..
T Consensus 198 ~aiifFtfaTiKTVDDHCGy~l-P~dpfqm~-----F~NNa~YHDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~E~~ 271 (287)
T KOG0874|consen 198 TAIIFFTFATIKTVDDHCGYWL-PGDPFQMF-----FPNNAAYHDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSLEKR 271 (287)
T ss_pred ceEEEEEeeeeeeecccccccc-CCCceeEe-----ccCCchhhhhhhhhhccccccCCcHHHHHHHHHhhcCCchhccc
Confidence 3333444556778899999976 88776653 23579999999998 6899985 89999999999998875554
Q ss_pred HH
Q 006623 283 EK 284 (638)
Q Consensus 283 ~~ 284 (638)
.+
T Consensus 272 ~e 273 (287)
T KOG0874|consen 272 LE 273 (287)
T ss_pred cc
Confidence 44
No 9
>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.69 E-value=4.2e-17 Score=145.44 Aligned_cols=111 Identities=29% Similarity=0.480 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHhh-HhhhhhhccccCccCcCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 006623 134 VHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYII 212 (638)
Q Consensus 134 l~~lv~Df~~Yw~HRllH-~~~Ly~r~HkvHHss~~p~~~ta~~~hplE~ll~~~~f~iPll~~~llg~~s~~~i~~y~i 212 (638)
+.+++.|+++||+||++| .+++| ++|+.||++++|+++++.+.+|+|.++..++ ++++..+++..+..++.++.+
T Consensus 3 ~~~l~~d~~~Y~~HRl~H~~~~l~-~~H~~HH~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 78 (114)
T PF04116_consen 3 LGFLLWDFWEYWMHRLLHKIPFLW-RIHKVHHSPKNPTPLSAFRFHPLEALLLALL---PLLLPLLLLPFHALAFLLGIA 78 (114)
T ss_pred eeHHHHHHHHHHHHHHHhcCchHH-HHHHHHhCCcccCchHHHHcChHHHHHHHHH---HHHHHHHHHhHhHHHHHHHHH
Confidence 446678999999999999 56666 9999999999999999999999999987653 333333345567777778888
Q ss_pred HHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhc
Q 006623 213 YVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHT 254 (638)
Q Consensus 213 ~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~ 254 (638)
+..+.+.++|||+.. + ..+.++++..+|++|+.||+
T Consensus 79 ~~~~~~~~~H~~~~~-~-----~~~~~~~~~~~~~~H~~HH~ 114 (114)
T PF04116_consen 79 LFYLWYIFIHSGYHH-R-----FPPRLRYLFVTPRHHDLHHS 114 (114)
T ss_pred HHHHHHHHhhcCccC-C-----CCCcchhHhcCHHHHHhhCc
Confidence 888999999999921 1 12456777889999999995
No 10
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.22 E-value=7.4e-11 Score=115.95 Aligned_cols=165 Identities=13% Similarity=0.055 Sum_probs=111.5
Q ss_pred ecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhc
Q 006623 445 VDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH 513 (638)
Q Consensus 445 v~Gnsltaavv~~~ip~---------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~ 513 (638)
++||++|||++++.+.+ ..++|+++|++| .+|+++++.|+++|.+|.+ |+.++.+++.+++......
T Consensus 1 ~~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG--~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~ 78 (194)
T cd01078 1 SNGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE 78 (194)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 68999999999988875 246999999999 9999999999999999988 8888888887765421111
Q ss_pred hhh--------hccc-cccceEE-E--eecCcCChhhhhcC-CCCceeecccccCCc-----CCCCCceeecCCccccCC
Q 006623 514 NLV--------LSTS-YAAHKTI-W--LVGDDLTGKEQARA-PKGTIFIPYTQIPPR-----KLRKDCFYHSTPAMIIPP 575 (638)
Q Consensus 514 ~l~--------~~~~-~~~~~i~-w--~vg~~~~~~~q~~a-~~G~~f~~~~~~~~~-----~~R~dc~y~~~~a~~~P~ 575 (638)
.+. +... .+.++++ - ..|.. .+.+..++ .+|.+++|+...|+. +.|+|.++.+++...-|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~diVi~at~~g~~-~~~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g~~~~g~- 156 (194)
T cd01078 79 GVGAVETSDDAARAAAIKGADVVFAAGAAGVE-LLEKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREGKVPYGA- 156 (194)
T ss_pred cEEEeeCCCHHHHHHHHhcCCEEEECCCCCce-echhhhcccCceeEEEEccCCCCCCcccccccCCceecCCCeEEEe-
Confidence 100 0011 1223444 1 12221 12222223 348999999954443 57899999998733212
Q ss_pred CCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchhhhhHHHHHHHHHhc
Q 006623 576 SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRH 629 (638)
Q Consensus 576 ~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~~e~G~iv~~i~~i~~aa~kH 629 (638)
...+++|+++.+||++|.|. +|+... +.++|-+.|+||
T Consensus 157 ------~~~~g~~~~~~~~~~ae~~~--~~~~~~--------~~~~~~~~~~~~ 194 (194)
T cd01078 157 ------IGVGGLKMKTHRACIAKLFE--SNPLVL--------DAEEIYDLAKEM 194 (194)
T ss_pred ------eccchhHHHHHHHHHHHHhh--cCCeee--------chHHHHHHHhcC
Confidence 13478999999999999998 476544 356666666665
No 11
>PLN02434 fatty acid hydroxylase
Probab=99.07 E-value=2.9e-09 Score=108.85 Aligned_cols=136 Identities=21% Similarity=0.295 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-hhHh-------hhhhhccccCccCcCCCchhhhhhhhHHHHHHHHHHHHHHHHHH--
Q 006623 128 VILTILVHMGPVEFLYYWFHRA-LHHH-------YLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM-- 197 (638)
Q Consensus 128 ~i~~lll~~lv~Df~~Yw~HRl-lH~~-------~Ly~r~HkvHHss~~p~~~ta~~~hplE~ll~~~~f~iPll~~~-- 197 (638)
.+..+++.+++.-+.+|.+||. +|.. .+..+.|..||.. |.-..-..++|.-.++....+..++..+.
T Consensus 83 ~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~--P~D~~rLv~PP~~~~~l~~~~~~l~~~~~~~ 160 (237)
T PLN02434 83 VVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKH--PMDGLRLVFPPAATAILCVPFWNLIALFATP 160 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcC--CCCCCCeecCcHHHHHHHHHHHHHHHHHcch
Confidence 4555667788899999999996 7842 2344679999975 33333344666554443332221111100
Q ss_pred -HhhhhhHHHHHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcC-CCCCcCCCchhhhhhcCCCC
Q 006623 198 -VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID 275 (638)
Q Consensus 198 -llg~~s~~~i~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT~~ 275 (638)
.....-...+.+|++| +......|.+ + |.. ++++. --++|..||.+ .+.|||...++||++|||..
T Consensus 161 ~~a~~~~~G~l~gYl~Y-d~~Hy~lH~~-~--p~~-----~~~r~---lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT~~ 228 (237)
T PLN02434 161 ATAPALFGGGLLGYVMY-DCTHYFLHHG-Q--PST-----DVLRN---LKKYHLNHHFRDQDKGFGITSSLWDRVFGTLP 228 (237)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHhc-C--cch-----HHHHH---HHHHHHHHcCCCCCCCCCcCchHHHHhcCCCC
Confidence 0000112234455443 5666777764 2 321 22332 47899999987 59999999999999999985
Q ss_pred CC
Q 006623 276 RS 277 (638)
Q Consensus 276 ~~ 277 (638)
++
T Consensus 229 ~~ 230 (237)
T PLN02434 229 PS 230 (237)
T ss_pred Cc
Confidence 43
No 12
>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]
Probab=97.93 E-value=2.4e-05 Score=78.24 Aligned_cols=136 Identities=21% Similarity=0.291 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH-hhHhh---------hhhhccccCccCcCCCchhhhhhhhHHHHHHHHHHHHHHHHHH--
Q 006623 130 LTILVHMGPVEFLYYWFHRA-LHHHY---------LYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM-- 197 (638)
Q Consensus 130 ~~lll~~lv~Df~~Yw~HRl-lH~~~---------Ly~r~HkvHHss~~p~~~ta~~~hplE~ll~~~~f~iPll~~~-- 197 (638)
..+++.++...+..|-+||+ +|.+. +---+|..||.-. .--.-..++|.-..+....+..++-.+.
T Consensus 85 ~~f~~Gvf~WTl~EY~lHRflFH~k~~~~s~~~~t~Hfl~HGcHHk~P--~D~~RLVfPP~~~~il~~pfy~~~~~vl~~ 162 (240)
T KOG0539|consen 85 GLFVIGVFTWTLIEYTLHRFLFHIKPNPDSYWLITLHFLIHGCHHKLP--MDGYRLVFPPTPFAILAAPFYLILSLVLPH 162 (240)
T ss_pred HHHHHHHHHHHHHHHHHHheEEEecCCCCchHHHHHHHHHhcccccCC--CCCceEecCCchHHHHHHHHHHHHHHhcCc
Confidence 34556667789999999997 68541 1123799999753 3333446666655554433333322110
Q ss_pred -HhhhhhHHHHHHHHHHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcC-CCCCcCCCchhhhhhcCCCC
Q 006623 198 -VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID 275 (638)
Q Consensus 198 -llg~~s~~~i~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT~~ 275 (638)
.....-...+++|+.+. .....-|-|-- |+ .|.++ .-..+|.-||-+ .+.-||....+||++|||.-
T Consensus 163 ~~~~a~faG~l~GYV~YD-mtHYyLHhg~p--~~-----~~~~~---~lK~yHl~HHfk~q~~GfGItS~lWD~VFgTl~ 231 (240)
T KOG0539|consen 163 PVAPAGFAGGLLGYVCYD-MTHYYLHHGSP--PK-----RPYLK---HLKKYHLNHHFKHQDLGFGITSSLWDYVFGTLG 231 (240)
T ss_pred chhhhhhccchhhhhhhh-hhhhhhhcCCC--CC-----chHHH---HHHHHHhhhhhhccccCccccHHHHHHHhccCC
Confidence 00011123456776654 44444454311 12 12332 247799999988 79999999999999999986
Q ss_pred CCC
Q 006623 276 RSS 278 (638)
Q Consensus 276 ~~~ 278 (638)
+..
T Consensus 232 ~~~ 234 (240)
T KOG0539|consen 232 PLK 234 (240)
T ss_pred CCc
Confidence 543
No 13
>PLN02601 beta-carotene hydroxylase
Probab=97.42 E-value=0.0011 Score=68.77 Aligned_cols=132 Identities=20% Similarity=0.316 Sum_probs=70.2
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH-hhHhhhhhhccccCccCcCCCchhhhhhhhHHHHHHHHHHHHHHHHH
Q 006623 118 SNLRFWRSDGVILTILVHMGPVEFLYYWFHRA-LHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTT 196 (638)
Q Consensus 118 ~~lP~W~~~g~i~~lll~~lv~Df~~Yw~HRl-lH~~~Ly~r~HkvHHss~~p~~~ta~~~hplE~ll~~~~f~iPll~~ 196 (638)
.++|.-...+.+..++.-++..|++-+|.||. ||- +.|..|+-||+... .++. ..+. +.+++++|.+.+
T Consensus 126 g~~p~~em~~~~al~lgtfvgMEf~Aw~aHKYvMHG--~LW~lH~sHH~Pr~-g~FE--~NDl-----FaVifAvpAIaL 195 (303)
T PLN02601 126 GEVSMLEMFGTFALSVGAAVGMEFWARWAHRALWHD--SLWNMHESHHKPRE-GAFE--LNDV-----FAIVNAVPAIGL 195 (303)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cchhhhhhcCCCCC-CCcc--cccc-----hhhhhHHHHHHH
Confidence 45664322223333444556689999999996 786 35889999998764 2222 1111 112233444333
Q ss_pred HHhhhhh---H--------HHHHHHH-HHHHHHHhhccCCceecccccccccCCcccccCCchhhhhhhcC--CCCCcCC
Q 006623 197 MVLKNAS---I--------ASFVGYI-IYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYSL 262 (638)
Q Consensus 197 ~llg~~s---~--------~~i~~y~-i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~--~~~NYG~ 262 (638)
+..|..+ . ..+.+|. .|+.+...+.|--+ |.....+-|+++. -...|.+||+. ...+||.
T Consensus 196 ~~~G~~~~g~~p~~~fgiGlGITlYGiaYffVHDgLVHqRf---p~~~~a~~~Y~rr---l~~AHklHHa~Ke~Gv~FGf 269 (303)
T PLN02601 196 LYYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRF---PVGPIANVPYLRK---VAAAHQLHHTDKFKGVPYGL 269 (303)
T ss_pred HHHhhccccccHHHHHHHHHhHHHHHHHHHHHhhhhhcccc---ccCCCCCCHHHHH---HHHHHHhhccCCcCCccceE
Confidence 3333210 0 1112232 34555566667433 3322222345554 47899999984 5688998
Q ss_pred Cch
Q 006623 263 FMP 265 (638)
Q Consensus 263 ~f~ 265 (638)
++.
T Consensus 270 ll~ 272 (303)
T PLN02601 270 FLG 272 (303)
T ss_pred Eec
Confidence 654
No 14
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.02 E-value=0.00084 Score=69.31 Aligned_cols=44 Identities=25% Similarity=0.323 Sum_probs=41.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (638)
+-|+++||++ -||.|+|+.|++.|.+|.+ |+.||+++|+.+++.
T Consensus 7 kv~lITGASS--GiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~ 52 (246)
T COG4221 7 KVALITGASS--GIGEATARALAEAGAKVVLAARREERLEALADEIGA 52 (246)
T ss_pred cEEEEecCcc--hHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc
Confidence 6789999995 9999999999999999999 999999999999886
No 15
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.02 E-value=0.00075 Score=70.68 Aligned_cols=49 Identities=16% Similarity=0.252 Sum_probs=44.7
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcch
Q 006623 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA 511 (638)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~ 511 (638)
...+.++++||++ -||+++|+.|+++|.+|++ |++||+++|++++....
T Consensus 4 ~~~~~~lITGASs--GIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~ 54 (265)
T COG0300 4 MKGKTALITGASS--GIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT 54 (265)
T ss_pred CCCcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh
Confidence 3567899999997 9999999999999999999 99999999999987655
No 16
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.97 E-value=0.0011 Score=62.02 Aligned_cols=92 Identities=21% Similarity=0.189 Sum_probs=60.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCCcch--hchhhhccc-cccceEE-Ee--ec-
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEA--QHNLVLSTS-YAAHKTI-WL--VG- 531 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~~~~--~~~l~~~~~-~~~~~i~-w~--vg- 531 (638)
..++|+++||. ..|+++|.+|+++|.+ +++ |+.+|.++|.++.+... ...+.+..+ .+.++++ .. +|
T Consensus 11 ~~~~vlviGaG---g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 11 KGKRVLVIGAG---GAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSGM 87 (135)
T ss_dssp TTSEEEEESSS---HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTTS
T ss_pred CCCEEEEECCH---HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCCC
Confidence 57899999995 7999999999999988 777 99999999998873321 122223322 2333444 22 22
Q ss_pred CcCChhhhhcCCCCc-eeecccccCCc
Q 006623 532 DDLTGKEQARAPKGT-IFIPYTQIPPR 557 (638)
Q Consensus 532 ~~~~~~~q~~a~~G~-~f~~~~~~~~~ 557 (638)
..++++....+++.. +++|.+ +|+.
T Consensus 88 ~~i~~~~~~~~~~~~~~v~Dla-~Pr~ 113 (135)
T PF01488_consen 88 PIITEEMLKKASKKLRLVIDLA-VPRD 113 (135)
T ss_dssp TSSTHHHHTTTCHHCSEEEES--SS-S
T ss_pred cccCHHHHHHHHhhhhceeccc-cCCC
Confidence 356777775555444 899998 6665
No 17
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.90 E-value=0.0035 Score=69.44 Aligned_cols=136 Identities=19% Similarity=0.164 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHhhHhhhhhhccccCccCcCCCch---------hhhhhhhHHHHHHHHHHHHHHHHHH-HhhhhhHH-
Q 006623 137 GPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPI---------TSVIHPFAEHIVYFLLFAIPLVTTM-VLKNASIA- 205 (638)
Q Consensus 137 lv~Df~~Yw~HRllH~~~Ly~r~HkvHHss~~p~~~---------ta~~~hplE~ll~~~~f~iPll~~~-llg~~s~~- 205 (638)
+..|..+=.+|-+.|+...+.|.|..||++..++-. +..|+.|.|.++..++-.+|-.... ........
T Consensus 17 ~~~~~~~d~~h~~~h~~~~l~~~h~~hh~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (406)
T PRK07424 17 LWVEIVRDSYHALAHQWNPLYRLHNWHHRVFRPDLSVVSEEIYRKAHWYNDVPEALVMLLFGTLPVLLLQQWNVPYGWLA 96 (406)
T ss_pred HHHHHHHHHHHHHHhhchHHHHHHHhHHhhcCCcCCcccHHHHhhhhhhcCCHHHHHHHHHhhHHHHHHhhhcccccchh
Confidence 345666666677777666666899999999887643 2458899997765443222222211 10000000
Q ss_pred -HHHHHHHHHHH------HHhhcc-CCcee--cccccccccCCcccccCCchhhhhhhcCCC-CCcCCCchhhhhhcCCC
Q 006623 206 -SFVGYIIYVDF------MNNMGH-CNFEF--IPMWLFTVFPPLKFLMYTPSYHSLHHTQFR-TNYSLFMPIYDYIYGTI 274 (638)
Q Consensus 206 -~i~~y~i~~~~------~~~~~H-sg~e~--~P~~~~~~lp~L~~li~tp~~H~lHH~~~~-~NYG~~f~~WDrLFGT~ 274 (638)
.-..|.+.+.. ..+... ++-|. .|..+.+ ++-.| +..+.||-.||-... .-||.++++.|+..||.
T Consensus 97 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~d~~h~~~~~~~--~~~~~-~v~~~~h~rh~~~~~~~~~~~~~~~~d~~~~ta 173 (406)
T PRK07424 97 WLGVLYTLTFLFGAIARGLGLPNADELTDLTHLPGPFET--LPSQW-FVNRPYHWRHHFDNQNAYYCGTFTLVDKLMGTA 173 (406)
T ss_pred hhhhHHHHHHHHHHHHHhcccccccccccccCCCCcccC--CCccC-eecCceeEEEEeccccceeeeeEEEeehhcCcc
Confidence 00112111111 111112 11111 1332222 12334 467899999998865 77899999999999996
Q ss_pred C
Q 006623 275 D 275 (638)
Q Consensus 275 ~ 275 (638)
.
T Consensus 174 ~ 174 (406)
T PRK07424 174 L 174 (406)
T ss_pred c
Confidence 4
No 18
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.72 E-value=0.0014 Score=69.73 Aligned_cols=47 Identities=17% Similarity=0.283 Sum_probs=42.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ 512 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~ 512 (638)
.=.+|+|||. +||++.|+-|||||.+|.+ |++|+++.+++|+.+...
T Consensus 50 ~WAVVTGaTD--GIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~ 98 (312)
T KOG1014|consen 50 SWAVVTGATD--GIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK 98 (312)
T ss_pred CEEEEECCCC--cchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC
Confidence 4567889996 9999999999999999999 999999999999876554
No 19
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.70 E-value=0.0045 Score=64.43 Aligned_cols=125 Identities=16% Similarity=0.125 Sum_probs=75.2
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc---hhchhhhcc
Q 006623 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE---AQHNLVLST 519 (638)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~---~~~~l~~~~ 519 (638)
|||-....+.--.......+.|+++|+ | -+|+++|..|++.|.+|++ |+.++.+++.+++... ....+.+..
T Consensus 99 TD~~G~~~~l~~~~~~~~~k~vliiGa-G--g~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~ 175 (270)
T TIGR00507 99 TDGIGLVSDLERLIPLRPNQRVLIIGA-G--GAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDELP 175 (270)
T ss_pred CCHHHHHHHHHhcCCCccCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhhc
Confidence 667776666322122334678999999 6 8999999999999999888 8888888887775321 111111111
Q ss_pred ccccceEE-EeecCcCCh------hhhhcCCCCceeecccccCCc-----CCC-CCceeecCCcccc
Q 006623 520 SYAAHKTI-WLVGDDLTG------KEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 573 (638)
Q Consensus 520 ~~~~~~i~-w~vg~~~~~------~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~ 573 (638)
...++++ -..+.+..+ -+....++|.+++|.+=.|++ +.| +.|.+.++-.|-+
T Consensus 176 -~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~~A~~~G~~~vdG~~Ml~ 241 (270)
T TIGR00507 176 -LHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLAEAKSLGTKTIDGLGMLV 241 (270)
T ss_pred -ccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeeeCCHHHHH
Confidence 1122333 232222111 112345788888998855554 223 6677777777754
No 20
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.50 E-value=0.0048 Score=68.49 Aligned_cols=154 Identities=17% Similarity=0.198 Sum_probs=93.3
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcchhchhhhccc-cccceEE-Eeec---C
Q 006623 461 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS-YAAHKTI-WLVG---D 532 (638)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~i~-w~vg---~ 532 (638)
...++|+++|+ | .+|+.++++|...|. +|++ |+.++.++++++.+.. ...+.+... ...+++| ...| -
T Consensus 180 ~~~~~vlViGa-G--~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~~~~~~l~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 180 LSGKKVLVIGA-G--EMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLDELPEALAEADIVISSTGAPHP 255 (423)
T ss_pred ccCCEEEEECc-h--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHHHHHHHhccCCEEEECCCCCCc
Confidence 35679999998 6 999999999999997 6776 8888888888886532 111111111 2223343 3333 2
Q ss_pred cCChhhhhcC-----CCCceeecccccCCc---CCC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhh
Q 006623 533 DLTGKEQARA-----PKGTIFIPYTQIPPR---KLR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH 602 (638)
Q Consensus 533 ~~~~~~q~~a-----~~G~~f~~~~~~~~~---~~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~ 602 (638)
.+++++...+ .++.+++|.+ +|+. ++. +++.+. .=++++. .++.....|.-.+-.|+.||-
T Consensus 256 ~i~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~------~vDdl~~--~~~~n~~~r~~~~~~a~~ii~ 326 (423)
T PRK00045 256 IIGKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLY------DVDDLQE--IVEENLAQRQEAAEKAEAIVE 326 (423)
T ss_pred EEcHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEE------EHHHHHH--HHHhhHHHHHHHHHHHHHHHH
Confidence 4556655443 3567899998 6654 121 222211 1112221 244566678888899999986
Q ss_pred ----hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006623 603 ----ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 627 (638)
Q Consensus 603 ----alEgw~~~-e~G~-i--v-~~i~~i~~aa~ 627 (638)
.++.|... +... | + +++++|-+.-+
T Consensus 327 ~~~~~f~~~~~~~~~~p~I~~lr~~~~~i~~~el 360 (423)
T PRK00045 327 EEVAEFMEWLRSLEVVPTIRALREQAEEIREEEL 360 (423)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 67777554 6666 5 3 66666555443
No 21
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.50 E-value=0.0072 Score=63.31 Aligned_cols=127 Identities=17% Similarity=0.127 Sum_probs=73.4
Q ss_pred eecCChhHHHHHH-hcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcchhchh-hhc
Q 006623 444 VVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNL-VLS 518 (638)
Q Consensus 444 vv~Gnsltaavv~-~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l-~~~ 518 (638)
=|||-...++.-- .......++|+|+|+ | -+|++++.+|++.| .+|++ |+.++.+++++++.......+ .+.
T Consensus 103 NTD~~G~~~~l~~~~~~~~~~k~vlVlGa-G--g~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~ 179 (278)
T PRK00258 103 NTDGIGFVRALEERLGVDLKGKRILILGA-G--GAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDLEL 179 (278)
T ss_pred cccHHHHHHHHHhccCCCCCCCEEEEEcC-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecccc
Confidence 3667766666642 223345678999998 6 89999999999999 67888 889999999887643211111 011
Q ss_pred cc-cccceEE-EeecCc------CChhhhhcCCCCceeecccccCCc-C----CC-CCceeecCCcccc
Q 006623 519 TS-YAAHKTI-WLVGDD------LTGKEQARAPKGTIFIPYTQIPPR-K----LR-KDCFYHSTPAMII 573 (638)
Q Consensus 519 ~~-~~~~~i~-w~vg~~------~~~~~q~~a~~G~~f~~~~~~~~~-~----~R-~dc~y~~~~a~~~ 573 (638)
.+ ...++++ .....+ .++-+....++++.++|++--|.. . .| +-|.+..+-.|-+
T Consensus 180 ~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~Ml~ 248 (278)
T PRK00258 180 QEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAWAKAQGARTIDGLGMLV 248 (278)
T ss_pred hhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCcCeecCCHHHHH
Confidence 11 2223343 222111 122233445777777777732322 1 12 5566666666543
No 22
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.35 E-value=0.0065 Score=58.13 Aligned_cols=60 Identities=23% Similarity=0.208 Sum_probs=46.8
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEeecCcCChhhhhcCC
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGDDLTGKEQARAP 543 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~~~q~~a~ 543 (638)
|+|+|||| .+|+.+++.|.++|.+|.. |++++.++ . ..++ ++.||..++++...|.
T Consensus 1 I~V~GatG--~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~---~~~~--------~~~~d~~d~~~~~~al 58 (183)
T PF13460_consen 1 ILVFGATG--FVGRALAKQLLRRGHEVTALVRSPSKAED---------S---PGVE--------IIQGDLFDPDSVKAAL 58 (183)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTSEEEEEESSGGGHHH---------C---TTEE--------EEESCTTCHHHHHHHH
T ss_pred eEEECCCC--hHHHHHHHHHHHCCCEEEEEecCchhccc---------c---cccc--------cceeeehhhhhhhhhh
Confidence 78999999 9999999999999999999 88887774 0 1122 3677777777777777
Q ss_pred CCce
Q 006623 544 KGTI 547 (638)
Q Consensus 544 ~G~~ 547 (638)
+|+.
T Consensus 59 ~~~d 62 (183)
T PF13460_consen 59 KGAD 62 (183)
T ss_dssp TTSS
T ss_pred hhcc
Confidence 7653
No 23
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.32 E-value=0.014 Score=57.02 Aligned_cols=92 Identities=20% Similarity=0.190 Sum_probs=61.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEeec--CcCChhhh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVG--DDLTGKEQ 539 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg--~~~~~~~q 539 (638)
.-++|+|+|-- ++|+.||+.|...|.+|++...|....+|.....=....+.++. .+++.++...| +.|+.|+.
T Consensus 22 ~Gk~vvV~GYG---~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~-~~adi~vtaTG~~~vi~~e~~ 97 (162)
T PF00670_consen 22 AGKRVVVIGYG---KVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEAL-RDADIFVTATGNKDVITGEHF 97 (162)
T ss_dssp TTSEEEEE--S---HHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHT-TT-SEEEE-SSSSSSB-HHHH
T ss_pred CCCEEEEeCCC---cccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHH-hhCCEEEECCCCccccCHHHH
Confidence 56789999987 99999999999999999996667777776664321222333333 23444546677 46899999
Q ss_pred hcCCCCceeecccccCCc
Q 006623 540 ARAPKGTIFIPYTQIPPR 557 (638)
Q Consensus 540 ~~a~~G~~f~~~~~~~~~ 557 (638)
..+|.|++++....++-+
T Consensus 98 ~~mkdgail~n~Gh~d~E 115 (162)
T PF00670_consen 98 RQMKDGAILANAGHFDVE 115 (162)
T ss_dssp HHS-TTEEEEESSSSTTS
T ss_pred HHhcCCeEEeccCcCcee
Confidence 999999999998876655
No 24
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.17 E-value=0.0093 Score=63.16 Aligned_cols=137 Identities=23% Similarity=0.256 Sum_probs=83.9
Q ss_pred ecCChhHHHHHHhcCcCC--CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcchh----chh
Q 006623 445 VDGSSLAAAVVVNSLPKT--TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQ----HNL 515 (638)
Q Consensus 445 v~Gnsltaavv~~~ip~~--~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~----~~l 515 (638)
|||-.+.-+-.=+.++.+ .++|++.||-|| +|||+.+|.+.|+ ++++ |+.+|.++|++..+.... ..+
T Consensus 106 TD~~G~~~~L~~~~~~~~~~~~~vlilGAGGA---arAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~ 182 (283)
T COG0169 106 TDGIGFLRALKEFGLPVDVTGKRVLILGAGGA---ARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAAL 182 (283)
T ss_pred CCHHHHHHHHHhcCCCcccCCCEEEEECCcHH---HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccc
Confidence 677777666665565544 489999999984 8999999999995 5777 999999999988664321 111
Q ss_pred hhcccc-ccceEE-----EeecC----cCChhhhhcCCCCceeecccccCCc-----CCC-CCceeecCCccccCCCCcc
Q 006623 516 VLSTSY-AAHKTI-----WLVGD----DLTGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSN 579 (638)
Q Consensus 516 ~~~~~~-~~~~i~-----w~vg~----~~~~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~P~~~~~ 579 (638)
.+.... +++-+| -..|. .++++ -.++++++.|+.=.|.+ ..| +=|.+.++..|-+- |+
T Consensus 183 ~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~---~l~~~~~v~D~vY~P~~TplL~~A~~~G~~~idGl~Mlv~---Qa 256 (283)
T COG0169 183 ADLEGLEEADLLINATPVGMAGPEGDSPVPAE---LLPKGAIVYDVVYNPLETPLLREARAQGAKTIDGLGMLVH---QA 256 (283)
T ss_pred cccccccccCEEEECCCCCCCCCCCCCCCcHH---hcCcCCEEEEeccCCCCCHHHHHHHHcCCeEECcHHHHHH---HH
Confidence 101101 122233 11111 12212 34888888888855544 223 56777777777654 44
Q ss_pred ccccccccCcc
Q 006623 580 MHSCENWLGRR 590 (638)
Q Consensus 580 ~~~~e~~~p~~ 590 (638)
..++|-|.+.+
T Consensus 257 a~aF~lwtg~~ 267 (283)
T COG0169 257 AEAFELWTGVE 267 (283)
T ss_pred HHHHHHHhCCC
Confidence 44555555443
No 25
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.12 E-value=0.012 Score=62.04 Aligned_cols=61 Identities=16% Similarity=0.110 Sum_probs=45.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEeecCcCChhhhhcC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGDDLTGKEQARA 542 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~~~q~~a 542 (638)
+|+|+|||| -||+.+++.|.++|.+|.. |+.++...++. . .+ . ++.||..++++...|
T Consensus 2 kIlVtGatG--~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-------~---~v-------~-~v~~Dl~d~~~l~~a 61 (317)
T CHL00194 2 SLLVIGATG--TLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-------W---GA-------E-LVYGDLSLPETLPPS 61 (317)
T ss_pred EEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-------c---CC-------E-EEECCCCCHHHHHHH
Confidence 699999999 9999999999999999887 66544332211 0 11 2 477888888888777
Q ss_pred CCC
Q 006623 543 PKG 545 (638)
Q Consensus 543 ~~G 545 (638)
-+|
T Consensus 62 l~g 64 (317)
T CHL00194 62 FKG 64 (317)
T ss_pred HCC
Confidence 777
No 26
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.11 E-value=0.033 Score=59.00 Aligned_cols=127 Identities=17% Similarity=0.184 Sum_probs=74.6
Q ss_pred HHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHH
Q 006623 405 EADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVA 482 (638)
Q Consensus 405 ~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip--~~~~~V~~~Gatg~~kig~ava 482 (638)
.|+++|++|+.+-..+ ++.. .|. +.+ -..+.+.+++..+ -..++|.++|. | .+|+++|
T Consensus 108 ~a~~~gi~v~~~~~~~---~va~-------~n~----~~~---Ae~ai~~al~~~~~~l~gk~v~IiG~-G--~iG~avA 167 (287)
T TIGR02853 108 LAADAGVKLIELFERD---DVAI-------YNS----IPT---AEGAIMMAIEHTDFTIHGSNVMVLGF-G--RTGMTIA 167 (287)
T ss_pred HHHHCCCeEEEEEecc---ceEE-------Ecc----HhH---HHHHHHHHHHhcCCCCCCCEEEEEcC-h--HHHHHHH
Confidence 6788888888766532 2211 110 000 1123334454432 24679999999 4 8999999
Q ss_pred HHHhccCcEEEe--cchhhHHHHHhh-CCcchhchhhhccccccceEE-EeecC-cCChhhhhcCCCCceeecccc
Q 006623 483 SSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAAHKTI-WLVGD-DLTGKEQARAPKGTIFIPYTQ 553 (638)
Q Consensus 483 ~~L~~~~~~v~~--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~~i~-w~vg~-~~~~~~q~~a~~G~~f~~~~~ 553 (638)
+.|...|.+|++ |+.++.++.++. ...-...+|.+.. +.+|++ -.+.. .++.+....+++|++++|.+-
T Consensus 168 ~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l--~~aDiVint~P~~ii~~~~l~~~k~~aliIDlas 241 (287)
T TIGR02853 168 RTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKV--AEIDIVINTIPALVLTADVLSKLPKHAVIIDLAS 241 (287)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHh--ccCCEEEECCChHHhCHHHHhcCCCCeEEEEeCc
Confidence 999999999998 777766655432 1110111222221 233444 12222 356777888999999999993
No 27
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.07 E-value=0.0079 Score=66.85 Aligned_cols=212 Identities=12% Similarity=0.100 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 006623 395 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR 469 (638)
Q Consensus 395 in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~-----~~~~V~~~ 469 (638)
|=.+|-+|...|.+.|.-=--|. . |=.. .+.+.|.-. =+.++-.|..=.+.++++-..+ ..++|+|+
T Consensus 116 IlgQVK~A~~~A~~~g~~g~~L~---~---lf~~-A~~~aKrVr-teT~I~~~~vSv~~~Av~la~~~~~~l~~kkvlvi 187 (414)
T PRK13940 116 ILGQVKDSYTLSKKNHAIGKELD---R---VFQK-VFATAKRVR-SETRIGHCPVSVAFSAITLAKRQLDNISSKNVLII 187 (414)
T ss_pred HHHHHHHHHHHHHHcCCchHHHH---H---HHHH-HHHHHHHHH-hccCCCCCCcCHHHHHHHHHHHHhcCccCCEEEEE
Confidence 33448888888888875321111 1 1111 244444422 3355555555455555554433 45789999
Q ss_pred cccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcchhchhhhccc-cccceEE-Eee---cCcCChhhhhc
Q 006623 470 GTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS-YAAHKTI-WLV---GDDLTGKEQAR 541 (638)
Q Consensus 470 Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~i~-w~v---g~~~~~~~q~~ 541 (638)
|+ | ++|+++|.+|+.+|+ ++++ |+.++-++|.++.+......+.+..+ ...+|+| ... .-.++.++.+
T Consensus 188 Ga-G--~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~~vi~~~~~~- 263 (414)
T PRK13940 188 GA-G--QTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLEYIVTCKYVG- 263 (414)
T ss_pred cC-c--HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCCeeECHHHhC-
Confidence 99 5 899999999999986 4666 88899999988865211111111111 1222333 111 1234554432
Q ss_pred CCCCceeecccccCCc-C--CC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhh----hhcCCCCC-c
Q 006623 542 APKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEGWDLN-E 611 (638)
Q Consensus 542 a~~G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~----alEgw~~~-e 611 (638)
.+..+++|.+ +|+. + +. +++.+.+-- +++. .++-.+..|...+=.|+.||- .++.|... .
T Consensus 264 -~~~~~~iDLa-vPRdidp~v~~l~~v~l~~iD------dl~~--i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~~~~ 333 (414)
T PRK13940 264 -DKPRVFIDIS-IPQALDPKLGELEQNVYYCVD------DINA--VIEDNKDKRKYESSKAQKIIVKSLEEYLEKEKAII 333 (414)
T ss_pred -CCCeEEEEeC-CCCCCCccccCcCCeEEEeHH------HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3467999999 7766 2 21 223222111 1221 134455567766667777765 67777655 5
Q ss_pred cch-h--h-hhHHHHHHHHHh
Q 006623 612 CGQ-T--M-CDIHQVWHASLR 628 (638)
Q Consensus 612 ~G~-i--v-~~i~~i~~aa~k 628 (638)
+.. | + ++.++|-+..++
T Consensus 334 ~~p~I~~lr~~~~~i~~~el~ 354 (414)
T PRK13940 334 SNSAIKELFQKADGLVDLSLE 354 (414)
T ss_pred chHHHHHHHHHHHHHHHHHHH
Confidence 666 5 4 777777554443
No 28
>PRK09186 flagellin modification protein A; Provisional
Probab=95.94 E-value=0.015 Score=58.30 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=37.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 4 ~k~vlItGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l 48 (256)
T PRK09186 4 GKTILITGAGG--LIGSALVKAILEAGGIVIAADIDKEALNELLESL 48 (256)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHH
Confidence 46899999998 9999999999999999998 7777777766554
No 29
>PLN00203 glutamyl-tRNA reductase
Probab=95.93 E-value=0.021 Score=65.34 Aligned_cols=210 Identities=15% Similarity=0.193 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHcCCcEEEec-ccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcC----cC---CCcEEEE
Q 006623 397 SLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSL----PK---TTAHVLL 468 (638)
Q Consensus 397 ~~I~~Ai~~A~k~G~kv~~LG-~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i----p~---~~~~V~~ 468 (638)
.+|.+|...|++.|.- | .||. |=.. .+.+.|.-. =+..+-.|..=.+.++++-. +. ..++|+|
T Consensus 201 gQVK~A~~~A~~~g~~----g~~L~~---LF~~-Ai~~~KrVR-teT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkVlV 271 (519)
T PLN00203 201 AQVKQVVKVGQGVDGF----GRNLSG---LFKH-AITAGKRVR-TETNIASGAVSVSSAAVELALMKLPESSHASARVLV 271 (519)
T ss_pred HHHHHHHHHHHHcCCc----cHHHHH---HHHH-HHHHHHHHh-hccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEEEE
Confidence 4477888888887742 2 1222 1111 133344422 22444444443333333322 32 3689999
Q ss_pred ecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcchh--chhhhccc-cccceEE-Ee---ecCcCChhh
Q 006623 469 RGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQ--HNLVLSTS-YAAHKTI-WL---VGDDLTGKE 538 (638)
Q Consensus 469 ~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~--~~l~~~~~-~~~~~i~-w~---vg~~~~~~~ 538 (638)
+|+ | ++|+++++.|+.+|. +|++ |+.++.+.++++.+.... ..+.+... ...+++| .. ..-.++++.
T Consensus 272 IGA-G--~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~~e~ 348 (519)
T PLN00203 272 IGA-G--KMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSETPLFLKEH 348 (519)
T ss_pred EeC-H--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCCCeeCHHH
Confidence 999 6 999999999999996 5777 899999999887642110 01111111 2233444 22 123577777
Q ss_pred hhcCCC-------CceeecccccCCc-C--CC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhh----
Q 006623 539 QARAPK-------GTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH---- 602 (638)
Q Consensus 539 q~~a~~-------G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~---- 602 (638)
.+.+++ ..+|+|.+ +|+. + +. +++.+.+ -+|++. .++-.+..|.-.+=.|+.||-
T Consensus 349 l~~~~~~~~~~~~~~~~IDLA-vPRdIdp~v~~l~~v~lyd------iDdL~~--i~~~n~~~R~~~~~~Ae~II~ee~~ 419 (519)
T PLN00203 349 VEALPPASDTVGGKRLFVDIS-VPRNVGACVSELESARVYN------VDDLKE--VVAANKEDRLRKAMEAQTIIREESK 419 (519)
T ss_pred HHHhhhcccccCCCeEEEEeC-CCCCCccccccCCCCeEEE------eccHHH--HHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 777654 25899999 8876 2 22 2222111 123332 255567777777777888875
Q ss_pred hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006623 603 ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 627 (638)
Q Consensus 603 alEgw~~~-e~G~-i--v-~~i~~i~~aa~ 627 (638)
.++.|... +... | + ++.+.|-+.-+
T Consensus 420 ~F~~w~~~~~~~p~I~~lr~~~~~i~~~El 449 (519)
T PLN00203 420 NFEAWRDSLETVPTIKKLRSYAERIRAAEL 449 (519)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 78888766 6777 5 4 66666655443
No 30
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.87 E-value=0.018 Score=56.44 Aligned_cols=87 Identities=18% Similarity=0.166 Sum_probs=56.3
Q ss_pred hhHHHHHHhcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccc
Q 006623 449 SLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH 524 (638)
Q Consensus 449 sltaavv~~~ip~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 524 (638)
+.++.-.++++.. ..++|+|+|+.. -+|..+|.+|.++|.+|++ |+. +++++.+. +++
T Consensus 28 ~~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r~~---~~l~~~l~-------------~aD 89 (168)
T cd01080 28 PAGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHSKT---KNLKEHTK-------------QAD 89 (168)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEECCc---hhHHHHHh-------------hCC
Confidence 3444445555543 679999999973 4699999999999999888 432 22211111 222
Q ss_pred eEEEeecC--cCChhhhhcCCCCceeecccccCCc
Q 006623 525 KTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR 557 (638)
Q Consensus 525 ~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~ 557 (638)
.|+..+|. .+++++. ++|+++||++ +|+.
T Consensus 90 iVIsat~~~~ii~~~~~---~~~~viIDla-~prd 120 (168)
T cd01080 90 IVIVAVGKPGLVKGDMV---KPGAVVIDVG-INRV 120 (168)
T ss_pred EEEEcCCCCceecHHHc---cCCeEEEEcc-CCCc
Confidence 23333332 4666655 7899999999 7774
No 31
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=95.84 E-value=0.021 Score=65.90 Aligned_cols=59 Identities=19% Similarity=0.363 Sum_probs=48.9
Q ss_pred CChhHHHHHHhcCcC-----CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 447 GSSLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 447 Gnsltaavv~~~ip~-----~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
|.+.....+.+.+|+ +.+.|+|+||+| .||+++++.|+++|.+|.+ |+.++.+.+.+++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATG--gIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l 124 (576)
T PLN03209 59 GATKFSSAAIEAIPKELDTKDEDLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSV 124 (576)
T ss_pred cchhhhhhhhhccccccccCCCCEEEEECCCC--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence 566666777888875 356899999999 9999999999999999987 8888887776554
No 32
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.68 E-value=0.042 Score=51.49 Aligned_cols=122 Identities=19% Similarity=0.135 Sum_probs=69.1
Q ss_pred cCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcc----hhchhhhc
Q 006623 446 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVE----AQHNLVLS 518 (638)
Q Consensus 446 ~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~----~~~~l~~~ 518 (638)
||-.+..|.--..+....++|.++|+ | .+|+++|+.|++.| .+|.+ |+.++.+++.++.... ...++.+.
T Consensus 2 d~~g~~~a~~~~~~~~~~~~i~iiG~-G--~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (155)
T cd01065 2 DGLGFVRALEEAGIELKGKKVLILGA-G--GAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEEL 78 (155)
T ss_pred CHHHHHHHHHhhCCCCCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhc
Confidence 44444444443344455688999998 7 99999999999885 67777 8888888877765432 11111111
Q ss_pred cccccceEE-EeecCcCC---h--hhhhcCCCCceeecccccCCc-----CCC-CCceeecCCccc
Q 006623 519 TSYAAHKTI-WLVGDDLT---G--KEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMI 572 (638)
Q Consensus 519 ~~~~~~~i~-w~vg~~~~---~--~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~ 572 (638)
.+.+++| -.+....- + .....+++|+.++|.+-+|+. +.| ..|.+..+..|-
T Consensus 79 --~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~ 142 (155)
T cd01065 79 --LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEML 142 (155)
T ss_pred --cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHH
Confidence 2233443 22222110 0 001124778888888766552 233 456555555543
No 33
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.63 E-value=0.026 Score=59.91 Aligned_cols=153 Identities=22% Similarity=0.247 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006623 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (638)
..+-+.-+..-.+.|++.|++..- |. +++.++++|.|. ++.++.= |++++. +=|||=
T Consensus 43 ~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl 122 (286)
T PRK14175 43 DGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGF 122 (286)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 334555566777788999987643 33 344447788873 3555522 332331 123443
Q ss_pred h----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006623 449 S----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (638)
Q Consensus 449 s----------------ltaavv~~~ip-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (638)
+ -|++.|++-+. -.-++|+++|+.+ -+|+.+|..|.++|..|++ .++
T Consensus 123 ~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~--~VG~pla~lL~~~gatVtv~~s~--------- 191 (286)
T PRK14175 123 HPINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSH--IVGQPVSKLLLQKNASVTILHSR--------- 191 (286)
T ss_pred CccchHhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCC---------
Confidence 2 36666666553 3578999999996 7999999999999999999 221
Q ss_pred CCcchhchhhhccccccceEEEeecCc--CChhhhhcCCCCceeecccccCCc---CCCCCcee
Q 006623 507 IPVEAQHNLVLSTSYAAHKTIWLVGDD--LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 565 (638)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~i~w~vg~~--~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y 565 (638)
..+|.+.+ -+++.++..+|+- ++++.. ++|++++|+. +++. ++--||-+
T Consensus 192 -----t~~l~~~~-~~ADIVIsAvg~p~~i~~~~v---k~gavVIDvG-i~~~~~gkl~GDvd~ 245 (286)
T PRK14175 192 -----SKDMASYL-KDADVIVSAVGKPGLVTKDVV---KEGAVIIDVG-NTPDENGKLKGDVDY 245 (286)
T ss_pred -----chhHHHHH-hhCCEEEECCCCCcccCHHHc---CCCcEEEEcC-CCcCCCCCeecCccH
Confidence 12333222 1344455677776 777654 8999999999 7763 34456553
No 34
>PRK06196 oxidoreductase; Provisional
Probab=95.44 E-value=0.028 Score=59.08 Aligned_cols=55 Identities=16% Similarity=0.132 Sum_probs=44.8
Q ss_pred HHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 451 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 451 taavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
++..+++.++...+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasg--gIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l 70 (315)
T PRK06196 14 TAEEVLAGHDLSGKTAIVTGGYS--GLGLETTRALAQAGAHVIVPARRPDVAREALAGI 70 (315)
T ss_pred cHHHHhcCCCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 35555676665567899999998 9999999999999999998 8888877765554
No 35
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.33 E-value=0.07 Score=61.14 Aligned_cols=124 Identities=17% Similarity=0.189 Sum_probs=78.2
Q ss_pred HHHHHHHcCCc--EEEecccccc------cccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC------------
Q 006623 402 AILEADAKGVK--VISLGLLNQG------EELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK------------ 461 (638)
Q Consensus 402 Ai~~A~k~G~k--v~~LG~ln~~------e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~------------ 461 (638)
-...+++.+++ +++...+++. +.+|..| +-+..-|+ +.. +++ -+.-+++|.-
T Consensus 169 i~~~v~~~~~~~iiiAips~~~~~~~~i~~~l~~~~-~~v~~lP~-~~~-l~~-----~~~~lreI~ieDLLgR~pV~~d 240 (588)
T COG1086 169 IERVVEELGIQLILIAIPSASQEERRRILLRLARTG-IAVRILPQ-LTD-LKD-----LNGQLREIEIEDLLGRPPVALD 240 (588)
T ss_pred HHHHHHHcCCceEEEecCCCCHHHHHHHHHHHHhcC-CcEEecCc-HHH-HHH-----hccccccCCHHHHhCCCCCCCC
Confidence 34456667777 6666666665 5666777 66666666 331 011 1111333311
Q ss_pred --------CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCcchhchhhhccccccceEEEee
Q 006623 462 --------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV 530 (638)
Q Consensus 462 --------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v 530 (638)
+.+.|+++||+| +||+.+|+-+++.+.+.++ +++-....++.++.+... ..+++-..
T Consensus 241 ~~~i~~~~~gK~vLVTGagG--SiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~----------~~~~~~~i 308 (588)
T COG1086 241 TELIGAMLTGKTVLVTGGGG--SIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP----------ELKLRFYI 308 (588)
T ss_pred HHHHHhHcCCCEEEEeCCCC--cHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC----------CcceEEEe
Confidence 478999999999 9999999999988877766 666666666666654333 11233467
Q ss_pred cCcCChhhhhcCCCC
Q 006623 531 GDDLTGKEQARAPKG 545 (638)
Q Consensus 531 g~~~~~~~q~~a~~G 545 (638)
||.-|.+-...|-.|
T Consensus 309 gdVrD~~~~~~~~~~ 323 (588)
T COG1086 309 GDVRDRDRVERAMEG 323 (588)
T ss_pred cccccHHHHHHHHhc
Confidence 888887776665555
No 36
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.28 E-value=0.077 Score=56.37 Aligned_cols=88 Identities=16% Similarity=0.190 Sum_probs=57.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchh--chhhhccccccceEE-Eeec-CcCC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ--HNLVLSTSYAAHKTI-WLVG-DDLT 535 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~--~~l~~~~~~~~~~i~-w~vg-~~~~ 535 (638)
..++|+++|+ | .+|++++..|.+.|.+|++ |+.++.+..++ .+.... .++.+. .+.+++| -.+. ..++
T Consensus 151 ~g~kvlViG~-G--~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~~~~~~l~~~--l~~aDiVI~t~p~~~i~ 224 (296)
T PRK08306 151 HGSNVLVLGF-G--RTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSPFHLSELAEE--VGKIDIIFNTIPALVLT 224 (296)
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeeecHHHHHHH--hCCCCEEEECCChhhhh
Confidence 4689999998 5 8999999999999999998 66666554433 222111 111111 1233444 1222 2366
Q ss_pred hhhhhcCCCCceeecccccCC
Q 006623 536 GKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 536 ~~~q~~a~~G~~f~~~~~~~~ 556 (638)
++....+++|++++|++ ..|
T Consensus 225 ~~~l~~~~~g~vIIDla-~~p 244 (296)
T PRK08306 225 KEVLSKMPPEALIIDLA-SKP 244 (296)
T ss_pred HHHHHcCCCCcEEEEEc-cCC
Confidence 77778899999999999 444
No 37
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.21 E-value=0.11 Score=55.86 Aligned_cols=138 Identities=15% Similarity=0.121 Sum_probs=81.5
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006623 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (638)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig~ 479 (638)
.|+|+++---=|....+-.--++.+.-+|+ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+- .+|+
T Consensus 64 ~g~K~~~~~p~n~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGaG---~~a~ 140 (325)
T PRK08618 64 LGLKIVSVVPENKKKGKPTIPGTVILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGTG---GQAK 140 (325)
T ss_pred EEEEEEeecCCCcccCCCcceEEEEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECCc---HHHH
Confidence 578887753223222222111245555554 45699999999985 3334555 5678899999998 7899
Q ss_pred HHHHHHh-ccCc-EEEe--cchhhHHHHHhhCCcchhchhhhccc----cccceEEEeecCcC-Chh-hhhcCCCCceee
Q 006623 480 AVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS----YAAHKTIWLVGDDL-TGK-EQARAPKGTIFI 549 (638)
Q Consensus 480 ava~~L~-~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~----~~~~~i~w~vg~~~-~~~-~q~~a~~G~~f~ 549 (638)
+.+.+|+ .+++ +|.+ |++++-+++.+++..+.........+ .+.+++| +....- +|. + .+.++|++++
T Consensus 141 ~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiV-i~aT~s~~p~i~-~~l~~G~hV~ 218 (325)
T PRK08618 141 GQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADII-VTVTNAKTPVFS-EKLKKGVHIN 218 (325)
T ss_pred HHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEE-EEccCCCCcchH-HhcCCCcEEE
Confidence 9999887 4454 4444 88899888877654322211111111 1334555 332221 121 2 5679999998
Q ss_pred cc
Q 006623 550 PY 551 (638)
Q Consensus 550 ~~ 551 (638)
.+
T Consensus 219 ~i 220 (325)
T PRK08618 219 AV 220 (325)
T ss_pred ec
Confidence 77
No 38
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.036 Score=55.65 Aligned_cols=46 Identities=22% Similarity=0.255 Sum_probs=39.6
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 460 p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+...+.|+++|++| -||+++|+.|+++|.+|++ |+++++++++.++
T Consensus 6 ~~~~k~ilItGasg--~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 53 (258)
T PRK06949 6 NLEGKVALVTGASS--GLGARFAQVLAQAGAKVVLASRRVERLKELRAEI 53 (258)
T ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 34557899999998 9999999999999999988 8888888776654
No 39
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.14 E-value=0.082 Score=56.06 Aligned_cols=128 Identities=14% Similarity=0.123 Sum_probs=74.8
Q ss_pred chhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHh-----cCcCCC
Q 006623 389 PWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVN-----SLPKTT 463 (638)
Q Consensus 389 ~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~-----~ip~~~ 463 (638)
|.-.....+.+.+++..|.. .|++|. +| +|.++..+. +-..= |...+++ .++-.-
T Consensus 100 Plp~~i~~~~~ld~I~~aKD-------Vdg~n~---~n-~G~l~~~~~---~~~p~------T~~gii~~L~~~~i~l~G 159 (283)
T PRK14192 100 PVPAQIDERACFDAISLAKD-------VDGVTC---LG-FGRMAMGEA---AYGSA------TPAGIMRLLKAYNIELAG 159 (283)
T ss_pred CCccccCHHHHHhccCHHHh-------cCCCCc---cc-cCccccCCC---cccCC------cHHHHHHHHHHcCCCCCC
Confidence 33334444557777754444 356676 55 555554432 22222 3344443 345567
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEeecC--cCChhhhhc
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQAR 541 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~ 541 (638)
++|+++|+.| -+|+++|..|.++|..|++-++ +-++|++.+ -+++.+|-.+|+ .++++.
T Consensus 160 k~vvViG~gg--~vGkpia~~L~~~gatVtv~~~-~t~~L~~~~-------------~~aDIvI~AtG~~~~v~~~~--- 220 (283)
T PRK14192 160 KHAVVVGRSA--ILGKPMAMMLLNANATVTICHS-RTQNLPELV-------------KQADIIVGAVGKPELIKKDW--- 220 (283)
T ss_pred CEEEEECCcH--HHHHHHHHHHHhCCCEEEEEeC-CchhHHHHh-------------ccCCEEEEccCCCCcCCHHH---
Confidence 7999999997 7999999999999999998211 222222222 122333334432 455544
Q ss_pred CCCCceeecccccCC
Q 006623 542 APKGTIFIPYTQIPP 556 (638)
Q Consensus 542 a~~G~~f~~~~~~~~ 556 (638)
.++|++++|+. ..|
T Consensus 221 lk~gavViDvg-~n~ 234 (283)
T PRK14192 221 IKQGAVVVDAG-FHP 234 (283)
T ss_pred cCCCCEEEEEE-Eee
Confidence 49999999998 555
No 40
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.11 E-value=0.025 Score=60.21 Aligned_cols=44 Identities=16% Similarity=0.262 Sum_probs=39.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++||+| -||+++|+.|+++|.+|.+ |++++++++++++.
T Consensus 53 g~~~lITGAs~--GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~ 98 (320)
T PLN02780 53 GSWALVTGPTD--GIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQ 98 (320)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
Confidence 36789999997 9999999999999999998 99999988877653
No 41
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.05 E-value=0.044 Score=54.58 Aligned_cols=43 Identities=14% Similarity=0.297 Sum_probs=37.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|.++|.+|++ |+.++.+++.+++
T Consensus 5 ~~~vlItGasg--~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (251)
T PRK07231 5 GKVAIVTGASS--GIGEGIARRFAAEGARVVVTDRNEEAAERVAAEI 49 (251)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35899999998 9999999999999999988 8887777666554
No 42
>PRK08339 short chain dehydrogenase; Provisional
Probab=94.98 E-value=0.044 Score=56.14 Aligned_cols=44 Identities=16% Similarity=0.205 Sum_probs=38.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+++++++.
T Consensus 8 ~k~~lItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 53 (263)
T PRK08339 8 GKLAFTTASSK--GIGFGVARVLARAGADVILLSRNEENLKKAREKIK 53 (263)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46789999997 9999999999999999998 88888887776643
No 43
>PRK06482 short chain dehydrogenase; Provisional
Probab=94.93 E-value=0.041 Score=56.23 Aligned_cols=43 Identities=21% Similarity=0.271 Sum_probs=37.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
++|+|+|++| -||+++|+.|+++|.+|.+ |+.++.++++++.+
T Consensus 3 k~vlVtGasg--~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (276)
T PRK06482 3 KTWFITGASS--GFGRGMTERLLARGDRVAATVRRPDALDDLKARYG 47 (276)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc
Confidence 5799999998 9999999999999999988 88888888776543
No 44
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=94.92 E-value=0.032 Score=61.97 Aligned_cols=91 Identities=20% Similarity=0.197 Sum_probs=65.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCcchhchhhhccc-cccceEE-Ee---ecCc
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTS-YAAHKTI-WL---VGDD 533 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~i~-w~---vg~~ 533 (638)
..++|+++||. ++|.-+|.+|+++|++.++ |+.+|-++|.+++. .....|.+..+ ...+||| +. -.-+
T Consensus 177 ~~~~vlvIGAG---em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-~~~~~l~el~~~l~~~DvVissTsa~~~i 252 (414)
T COG0373 177 KDKKVLVIGAG---EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-AEAVALEELLEALAEADVVISSTSAPHPI 252 (414)
T ss_pred ccCeEEEEccc---HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-CeeecHHHHHHhhhhCCEEEEecCCCccc
Confidence 68899999998 9999999999999966555 99999999999988 22333344443 3444555 22 2235
Q ss_pred CChhhhhcC---CCCceeecccccCCc
Q 006623 534 LTGKEQARA---PKGTIFIPYTQIPPR 557 (638)
Q Consensus 534 ~~~~~q~~a---~~G~~f~~~~~~~~~ 557 (638)
++.++...+ +++.+++|++ +|+.
T Consensus 253 i~~~~ve~a~~~r~~~livDia-vPRd 278 (414)
T COG0373 253 ITREMVERALKIRKRLLIVDIA-VPRD 278 (414)
T ss_pred cCHHHHHHHHhcccCeEEEEec-CCCC
Confidence 666665555 4447899999 8887
No 45
>PRK07326 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.046 Score=54.15 Aligned_cols=44 Identities=23% Similarity=0.262 Sum_probs=37.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++|++| .||+++|+.|.++|.+|.+ |+.++.+++.+++.
T Consensus 6 ~~~ilItGatg--~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~ 51 (237)
T PRK07326 6 GKVALITGGSK--GIGFAIAEALLAEGYKVAITARDQKELEEAAAELN 51 (237)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHh
Confidence 36799999998 9999999999999999988 77777776665543
No 46
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.86 E-value=0.048 Score=54.51 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=34.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (638)
+.|+++|++| .||+++|+.|+++|.+|++ |+.++.+++.++
T Consensus 5 ~~vlItGa~g--~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~ 48 (250)
T PRK08063 5 KVALVTGSSR--GIGKAIALRLAEEGYDIAVNYARSRKAAEETAEE 48 (250)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 5799999998 9999999999999999765 677666655544
No 47
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.04 Score=55.29 Aligned_cols=41 Identities=17% Similarity=0.313 Sum_probs=36.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++
T Consensus 2 ~~vlItGas~--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATS--GIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence 4689999998 9999999999999999988 888888877654
No 48
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.84 E-value=0.046 Score=55.13 Aligned_cols=38 Identities=24% Similarity=0.269 Sum_probs=35.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
.|+|+|||| .||+++|+.|.++|.+|.. |+.++...++
T Consensus 2 ~ilV~GatG--~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~ 41 (275)
T COG0702 2 KILVTGATG--FVGGAVVRELLARGHEVRAAVRNPEAAAALA 41 (275)
T ss_pred eEEEEeccc--chHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence 689999999 9999999999999999999 9999988877
No 49
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=94.83 E-value=0.062 Score=57.31 Aligned_cols=149 Identities=17% Similarity=0.197 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 006623 395 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR 469 (638)
Q Consensus 395 in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~-----~~~~V~~~ 469 (638)
|=.++.+|...|++.|.-=- .||. |=.. -+.+.|.-. -+..+-.|..=++..+++...+ ..++|+++
T Consensus 113 IlgQvk~A~~~a~~~g~~~~---~L~~---lf~~-a~~~~k~vr-~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~Vi 184 (311)
T cd05213 113 ILGQVKNAYKLAKEAGTSGK---LLNR---LFQK-AIKVGKRVR-TETGISRGAVSISSAAVELAEKIFGNLKGKKVLVI 184 (311)
T ss_pred HHHHHHHHHHHHHHcCCchH---HHHH---HHHH-HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEE
Confidence 33448899999998876211 1121 1111 122223311 2244444443333334444433 47889999
Q ss_pred cccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcchh--chhhhccccccceEE-EeecCcCC---hhhhh
Q 006623 470 GTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQ--HNLVLSTSYAAHKTI-WLVGDDLT---GKEQA 540 (638)
Q Consensus 470 Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~--~~l~~~~~~~~~~i~-w~vg~~~~---~~~q~ 540 (638)
|+ | .+|+.+++.|+++| .+|++ |+.++.++++++.+.... .++.+. ...+++| ..+|..-. .++..
T Consensus 185 Ga-G--~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~--l~~aDvVi~at~~~~~~~~~~~~~ 259 (311)
T cd05213 185 GA-G--EMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLEL--LNEADVVISATGAPHYAKIVERAM 259 (311)
T ss_pred Cc-H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHH--HhcCCEEEECCCCCchHHHHHHHH
Confidence 98 6 99999999999766 56666 888889889888664221 111111 1223444 34443222 11111
Q ss_pred -cC-CCCceeecccccCCc
Q 006623 541 -RA-PKGTIFIPYTQIPPR 557 (638)
Q Consensus 541 -~a-~~G~~f~~~~~~~~~ 557 (638)
.. .+|.+++|.+ +|+.
T Consensus 260 ~~~~~~~~~viDla-vPrd 277 (311)
T cd05213 260 KKRSGKPRLIVDLA-VPRD 277 (311)
T ss_pred hhCCCCCeEEEEeC-CCCC
Confidence 11 2578899998 6555
No 50
>PRK08265 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.042 Score=55.97 Aligned_cols=44 Identities=25% Similarity=0.307 Sum_probs=38.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++.
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (261)
T PRK08265 6 GKVAIVTGGAT--LIGAAVARALVAAGARVAIVDIDADNGAAVAASLG 51 (261)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 46899999998 9999999999999999998 88888887776653
No 51
>PRK05867 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.044 Score=55.28 Aligned_cols=44 Identities=30% Similarity=0.339 Sum_probs=38.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 8 ~~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 53 (253)
T PRK05867 8 HGKRALITGAST--GIGKRVALAYVEAGAQVAIAARHLDALEKLADEI 53 (253)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 457899999997 9999999999999999998 8888888776654
No 52
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.77 E-value=0.21 Score=53.32 Aligned_cols=144 Identities=17% Similarity=0.198 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHHHHHHcCCcE--EEeccccc-------ccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006623 392 REAINSLIEEAILEADAKGVKV--ISLGLLNQ-------GEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv--~~LG~ln~-------~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (638)
..+-+.-+....+.|++.|++. +-|..-.+ ++++|.|- ++.++.= |++++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl 121 (293)
T PRK14185 42 DGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF 121 (293)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCC
Confidence 3455555777788999999998 55554332 25788874 3555532 333431 123332
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHH
Q 006623 449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEK 502 (638)
Q Consensus 449 s----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~ 502 (638)
+ -|++.|++=+ +-.-++|+++|... -||+-+|..|.++ +..|++ .++
T Consensus 122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~----- 194 (293)
T PRK14185 122 HPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSN--IVGKPMAQLMMQKAYPGDCTVTVCHSR----- 194 (293)
T ss_pred CHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHcCCCCCCCEEEEecCC-----
Confidence 2 2677776644 44678999999997 9999999999988 678888 221
Q ss_pred HHhhCCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 503 LKLRIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 503 l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
..+|.+.+ -+|+.+|.++|+ -++++.. ++|+++||+. +.+
T Consensus 195 ---------T~nl~~~~-~~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~ 236 (293)
T PRK14185 195 ---------SKNLKKEC-LEADIIIAALGQPEFVKADMV---KEGAVVIDVG-TTR 236 (293)
T ss_pred ---------CCCHHHHH-hhCCEEEEccCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence 23444444 245555567775 4677666 9999999998 654
No 53
>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1. UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].
Probab=94.76 E-value=0.07 Score=53.04 Aligned_cols=54 Identities=17% Similarity=0.338 Sum_probs=39.8
Q ss_pred HHHHhhccCCceecccc--cccccCCcccccCCchhhhhhhcC-CCCCcCCCchhhhhhcCC
Q 006623 215 DFMNNMGHCNFEFIPMW--LFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGT 273 (638)
Q Consensus 215 ~~~~~~~Hsg~e~~P~~--~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT 273 (638)
....-+.|.... .|.+ +.+..+ ++.+|++|..||.. +++|||...++|+.+...
T Consensus 99 nq~HkWsH~~~~-~P~~V~~LQ~~g----illsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~ 155 (178)
T PF10520_consen 99 NQFHKWSHTYKS-LPPWVRFLQDAG----ILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDK 155 (178)
T ss_pred HHHHHHHcCCCC-CCHHHHHHHHCC----cccCchhhhccccCcccCCeEeecccchHHHHH
Confidence 344567788655 4654 223333 45689999999999 999999999999988765
No 54
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.73 E-value=0.052 Score=55.02 Aligned_cols=41 Identities=22% Similarity=0.297 Sum_probs=36.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 2 ~vlItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 44 (259)
T PRK08340 2 NVLVTASSR--GIGFNVARELLKKGARVVISSRNEENLEKALKEL 44 (259)
T ss_pred eEEEEcCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 689999997 9999999999999999998 8888877776665
No 55
>PRK07454 short chain dehydrogenase; Provisional
Probab=94.69 E-value=0.058 Score=53.81 Aligned_cols=43 Identities=21% Similarity=0.356 Sum_probs=36.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 6 ~k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (241)
T PRK07454 6 MPRALITGASS--GIGKATALAFAKAGWDLALVARSQDALEALAAEL 50 (241)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 7777776665543
No 56
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.68 E-value=0.13 Score=49.14 Aligned_cols=75 Identities=16% Similarity=0.067 Sum_probs=52.0
Q ss_pred cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCcchhchhhhccccccceEEEeecCc--C
Q 006623 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGDD--L 534 (638)
Q Consensus 458 ~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~~--~ 534 (638)
+++-..++|.++|.+. .+|+.+|..|.++|..|++ .++. .+|.+.. -++|.|+..+|+- +
T Consensus 23 ~~~~~gk~v~VvGrs~--~vG~pla~lL~~~gatV~~~~~~t--------------~~l~~~v-~~ADIVvsAtg~~~~i 85 (140)
T cd05212 23 GVRLDGKKVLVVGRSG--IVGAPLQCLLQRDGATVYSCDWKT--------------IQLQSKV-HDADVVVVGSPKPEKV 85 (140)
T ss_pred CCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeCCCC--------------cCHHHHH-hhCCEEEEecCCCCcc
Confidence 4455788999999998 9999999999999999999 2111 1222222 1333344555543 4
Q ss_pred ChhhhhcCCCCceeeccc
Q 006623 535 TGKEQARAPKGTIFIPYT 552 (638)
Q Consensus 535 ~~~~q~~a~~G~~f~~~~ 552 (638)
+++.. ++|++++|+.
T Consensus 86 ~~~~i---kpGa~Vidvg 100 (140)
T cd05212 86 PTEWI---KPGATVINCS 100 (140)
T ss_pred CHHHc---CCCCEEEEcC
Confidence 55544 9999999987
No 57
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.64 E-value=0.15 Score=54.58 Aligned_cols=144 Identities=19% Similarity=0.242 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006623 393 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 442 (638)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 442 (638)
.+-+.-++.-++.|++.|+++.-. . +++.++++|.|- ++.++.= |++++.
T Consensus 43 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~ 122 (295)
T PRK14174 43 PASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFH 122 (295)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 345555777788999999987554 3 444557888884 3555522 332332
Q ss_pred -----eeecCC------hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEecchhhHHH
Q 006623 443 -----KVVDGS------SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVATICKDDYEK 502 (638)
Q Consensus 443 -----rvv~Gn------sltaavv~~~ip-----~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~~~~~~~~~~ 502 (638)
|+..|. .-|++.|++=+. -.-++|+++|... -||+-+|..|.+ +|..|++.+.
T Consensus 123 ~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~atVt~~hs----- 195 (295)
T PRK14174 123 PENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSN--IVGKPMANLMLQKLKESNCTVTICHS----- 195 (295)
T ss_pred hhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHhccccCCCEEEEEeC-----
Confidence 222332 257777776554 3578999999998 999999999987 7888888111
Q ss_pred HHhhCCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 503 LKLRIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 503 l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
...+|.+.+ -+|+.++..+|+ .++++.. ++|++++|++ ++.
T Consensus 196 --------~t~~l~~~~-~~ADIvI~Avg~~~li~~~~v---k~GavVIDVg-i~~ 238 (295)
T PRK14174 196 --------ATKDIPSYT-RQADILIAAIGKARFITADMV---KPGAVVIDVG-INR 238 (295)
T ss_pred --------CchhHHHHH-HhCCEEEEecCccCccCHHHc---CCCCEEEEee-ccc
Confidence 112223233 133334456664 4666666 9999999998 554
No 58
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=94.60 E-value=0.048 Score=54.97 Aligned_cols=44 Identities=20% Similarity=0.222 Sum_probs=37.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
..+.|+++|++| .||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 9 ~~k~vlItGa~g--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i 54 (255)
T PRK07523 9 TGRRALVTGSSQ--GIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL 54 (255)
T ss_pred CCCEEEEECCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 356899999998 9999999999999999998 7777776665544
No 59
>PRK07825 short chain dehydrogenase; Provisional
Probab=94.51 E-value=0.054 Score=55.26 Aligned_cols=44 Identities=18% Similarity=0.215 Sum_probs=38.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++|++| .||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 5 ~~~ilVtGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (273)
T PRK07825 5 GKVVAITGGAR--GIGLATARALAALGARVAIGDLDEALAKETAAELG 50 (273)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 35799999998 9999999999999999988 88888887766543
No 60
>PRK05854 short chain dehydrogenase; Provisional
Probab=94.46 E-value=0.048 Score=57.59 Aligned_cols=43 Identities=16% Similarity=0.160 Sum_probs=37.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.++++|+++ -||+++|+.|+++|.+|.+ |+.++.++..+++
T Consensus 14 gk~~lITGas~--GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l 58 (313)
T PRK05854 14 GKRAVVTGASD--GLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAI 58 (313)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46799999997 9999999999999999998 8888877666554
No 61
>PRK07063 short chain dehydrogenase; Provisional
Probab=94.45 E-value=0.051 Score=54.92 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=38.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 7 ~k~vlVtGas~--gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~ 52 (260)
T PRK07063 7 GKVALVTGAAQ--GIGAAIARAFAREGAAVALADLDAALAERAAAAIA 52 (260)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999997 9999999999999999988 88888887776653
No 62
>PRK07024 short chain dehydrogenase; Provisional
Probab=94.38 E-value=0.068 Score=54.13 Aligned_cols=43 Identities=19% Similarity=0.385 Sum_probs=37.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.++++++++
T Consensus 3 ~~vlItGas~--gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 47 (257)
T PRK07024 3 LKVFITGASS--GIGQALAREYARQGATLGLVARRTDALQAFAARLP 47 (257)
T ss_pred CEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc
Confidence 5799999998 9999999999999999998 88888887776654
No 63
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.32 E-value=0.096 Score=55.92 Aligned_cols=46 Identities=15% Similarity=0.077 Sum_probs=36.0
Q ss_pred hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 457 ~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
++......+|+|+|++| -||+.+|+.|.++|.+|.. |+.++.+.+.
T Consensus 4 ~~~~~~~~~vLVtG~~G--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~ 51 (353)
T PLN02896 4 EGRESATGTYCVTGATG--YIGSWLVKLLLQRGYTVHATLRDPAKSLHLL 51 (353)
T ss_pred cccccCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence 34444567899999999 9999999999999999987 6655444443
No 64
>PRK08267 short chain dehydrogenase; Provisional
Probab=94.32 E-value=0.064 Score=54.20 Aligned_cols=43 Identities=16% Similarity=0.299 Sum_probs=38.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.+..+++.++++
T Consensus 2 k~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 46 (260)
T PRK08267 2 KSIFITGAAS--GIGRATALLFAAEGWRVGAYDINEAGLAALAAELG 46 (260)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999998 88888888876654
No 65
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=94.29 E-value=0.31 Score=53.44 Aligned_cols=89 Identities=16% Similarity=0.151 Sum_probs=63.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc------hhchhhhccccccceEE-Eee---
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE------AQHNLVLSTSYAAHKTI-WLV--- 530 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~------~~~~l~~~~~~~~~~i~-w~v--- 530 (638)
.++|+|+|+ | .+|+.+|+.|.+.|.+|++ ++.++.++++++.+.. ....|.+.. ..+|++ -.+
T Consensus 167 ~~~VlViGa-G--~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l--~~aDvVI~a~~~~ 241 (370)
T TIGR00518 167 PGDVTIIGG-G--VVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV--KRADLLIGAVLIP 241 (370)
T ss_pred CceEEEEcC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH--ccCCEEEEccccC
Confidence 356999999 6 9999999999999999888 7788888887665431 112222222 223443 122
Q ss_pred cC----cCChhhhhcCCCCceeecccccCCc
Q 006623 531 GD----DLTGKEQARAPKGTIFIPYTQIPPR 557 (638)
Q Consensus 531 g~----~~~~~~q~~a~~G~~f~~~~~~~~~ 557 (638)
|+ .++.+..+.+++|.+++|++ +++-
T Consensus 242 g~~~p~lit~~~l~~mk~g~vIvDva-~d~G 271 (370)
T TIGR00518 242 GAKAPKLVSNSLVAQMKPGAVIVDVA-IDQG 271 (370)
T ss_pred CCCCCcCcCHHHHhcCCCCCEEEEEe-cCCC
Confidence 22 26889999999999999999 7776
No 66
>PRK07109 short chain dehydrogenase; Provisional
Probab=94.27 E-value=0.076 Score=56.84 Aligned_cols=44 Identities=25% Similarity=0.327 Sum_probs=38.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++++++
T Consensus 7 ~~k~vlITGas~--gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l 52 (334)
T PRK07109 7 GRQVVVITGASA--GVGRATARAFARRGAKVVLLARGEEGLEALAAEI 52 (334)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 346899999998 9999999999999999988 8888888776654
No 67
>PRK06194 hypothetical protein; Provisional
Probab=94.27 E-value=0.078 Score=54.39 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=35.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++++++.+++
T Consensus 7 k~vlVtGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (287)
T PRK06194 7 KVAVITGAAS--GFGLAFARIGAALGMKLVLADVQQDALDRAVAEL 50 (287)
T ss_pred CEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Confidence 5799999998 9999999999999999988 7777766665553
No 68
>PLN02253 xanthoxin dehydrogenase
Probab=94.27 E-value=0.092 Score=53.77 Aligned_cols=43 Identities=16% Similarity=0.208 Sum_probs=36.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.+..+++.+++
T Consensus 18 ~k~~lItGas~--gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~ 62 (280)
T PLN02253 18 GKVALVTGGAT--GIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL 62 (280)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Confidence 46899999998 9999999999999999988 6666666666655
No 69
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.26 E-value=0.06 Score=53.84 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=36.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+.|+++|++| .||+++|+.|.++|.+|.+ |+.++.+++++++
T Consensus 5 ~~vlItG~sg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 48 (258)
T PRK12429 5 KVALVTGAAS--GIGLEIALALAKEGAKVVIADLNDEAAAAAAEAL 48 (258)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 6899999998 9999999999999999988 8888777766554
No 70
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.26 E-value=0.064 Score=53.55 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=35.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++.++
T Consensus 2 ~~vlItGa~g--~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~ 44 (255)
T TIGR01963 2 KTALVTGAAS--GIGLAIALALAAAGANVVVNDLGEAGAEAAAKV 44 (255)
T ss_pred CEEEEcCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4699999998 9999999999999999988 777777766654
No 71
>PRK05993 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.065 Score=55.15 Aligned_cols=41 Identities=20% Similarity=0.271 Sum_probs=36.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++++++.
T Consensus 5 k~vlItGasg--giG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~ 47 (277)
T PRK05993 5 RSILITGCSS--GIGAYCARALQSDGWRVFATCRKEEDVAALEAE 47 (277)
T ss_pred CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC
Confidence 5799999998 9999999999999999998 888888877653
No 72
>PRK07890 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.066 Score=53.77 Aligned_cols=43 Identities=14% Similarity=0.219 Sum_probs=37.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 5 ~k~vlItGa~~--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (258)
T PRK07890 5 GKVVVVSGVGP--GLGRTLAVRAARAGADVVLAARTAERLDEVAAEI 49 (258)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 36799999998 9999999999999999998 7777777776554
No 73
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.24 E-value=0.055 Score=58.19 Aligned_cols=53 Identities=19% Similarity=0.203 Sum_probs=43.2
Q ss_pred HHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006623 455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (638)
Q Consensus 455 v~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (638)
+.+.++-..+.++++|+|+ -||+++|+.|+++|.+|.| |+.++-++.++++..
T Consensus 27 ~~~~~~~~~~~~vVTGans--GIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~ 81 (314)
T KOG1208|consen 27 VTHGIDLSGKVALVTGATS--GIGFETARELALRGAHVVLACRNEERGEEAKEQIQK 81 (314)
T ss_pred eeccccCCCcEEEEECCCC--chHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3444454557899999996 9999999999999999999 998887777776554
No 74
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.23 E-value=0.07 Score=53.84 Aligned_cols=44 Identities=25% Similarity=0.258 Sum_probs=38.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 6 ~~~vlItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (257)
T PRK07067 6 GKVALLTGAAS--GIGEAVAERYLAEGARVVIADIKPARARLAALEIG 51 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC
Confidence 45799999998 9999999999999999988 88888887776643
No 75
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.22 E-value=0.11 Score=55.17 Aligned_cols=144 Identities=17% Similarity=0.198 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------------
Q 006623 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI---------------- 442 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i---------------- 442 (638)
..+-+.-+..-++.|++.|++..- |- ++...++||.|- |+.++.= |++++.
T Consensus 37 d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl 116 (279)
T PRK14178 37 DPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGF 116 (279)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccC
Confidence 334455566778889999998744 42 344446788775 3555422 333431
Q ss_pred ------eeecCC----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006623 443 ------KVVDGS----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (638)
Q Consensus 443 ------rvv~Gn----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (638)
|+..|+ .-|++.|++=+ +-.-++|.++|... -+|+.+|..|.++|-.|++ .++
T Consensus 117 ~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~--~vGrpla~lL~~~~atVtv~hs~--------- 185 (279)
T PRK14178 117 HPLNLGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSI--DVGRPMAALLLNADATVTICHSK--------- 185 (279)
T ss_pred ChhhHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--cccHHHHHHHHhCCCeeEEEecC---------
Confidence 122232 23666665544 33579999999997 9999999999999999998 221
Q ss_pred CCcchhchhhhccccccceEEEeec--CcCChhhhhcCCCCceeecccccCC
Q 006623 507 IPVEAQHNLVLSTSYAAHKTIWLVG--DDLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~i~w~vg--~~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
..+|.+.+ -+||.++..+| +.++++.. ++|++++|++ ++.
T Consensus 186 -----t~~L~~~~-~~ADIvI~Avgk~~lv~~~~v---k~GavVIDVg-i~~ 227 (279)
T PRK14178 186 -----TENLKAEL-RQADILVSAAGKAGFITPDMV---KPGATVIDVG-INQ 227 (279)
T ss_pred -----hhHHHHHH-hhCCEEEECCCcccccCHHHc---CCCcEEEEee-ccc
Confidence 12334333 13444446776 45676665 9999999999 665
No 76
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.21 E-value=0.067 Score=53.88 Aligned_cols=44 Identities=16% Similarity=0.330 Sum_probs=37.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
..+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 8 ~~k~~lItGas~--giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l 53 (254)
T PRK08085 8 AGKNILITGSAQ--GIGFLLATGLAEYGAEIIINDITAERAELAVAKL 53 (254)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHH
Confidence 456899999998 9999999999999999999 7777777665554
No 77
>PRK06500 short chain dehydrogenase; Provisional
Probab=94.20 E-value=0.075 Score=52.94 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=37.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++++
T Consensus 7 k~vlItGasg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK06500 7 KTALITGGTS--GIGLETARQFLAEGARVAITGRDPASLEAARAELG 51 (249)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC
Confidence 5799999998 9999999999999999988 77777777766653
No 78
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=94.17 E-value=0.066 Score=56.85 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=27.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
++|+|+||+| =||+++++.|.++|.+|..
T Consensus 1 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~ 29 (343)
T TIGR01472 1 KIALITGITG--QDGSYLAEFLLEKGYEVHG 29 (343)
T ss_pred CeEEEEcCCC--cHHHHHHHHHHHCCCEEEE
Confidence 4799999999 9999999999999999987
No 79
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.15 E-value=0.07 Score=53.38 Aligned_cols=41 Identities=27% Similarity=0.348 Sum_probs=36.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 2 ~vlItGas~--giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~ 44 (223)
T PRK05884 2 EVLVTGGDT--DLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL 44 (223)
T ss_pred eEEEEeCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 589999998 9999999999999999988 8888888776554
No 80
>PRK07478 short chain dehydrogenase; Provisional
Probab=94.15 E-value=0.064 Score=54.01 Aligned_cols=43 Identities=19% Similarity=0.303 Sum_probs=37.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 6 ~k~~lItGas~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 50 (254)
T PRK07478 6 GKVAIITGASS--GIGRAAAKLFAREGAKVVVGARRQAELDQLVAEI 50 (254)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 8888888776654
No 81
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=94.15 E-value=0.23 Score=56.22 Aligned_cols=144 Identities=17% Similarity=0.123 Sum_probs=90.1
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEE-Eeec--CcC
Q 006623 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTI-WLVG--DDL 534 (638)
Q Consensus 460 p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~-w~vg--~~~ 534 (638)
.-..++|.|+|.- .||+++|+.|...|.+|+. ++..+-..... .+.+ ..++.+.. +.+|++ -..| ..+
T Consensus 251 ~LaGKtVgVIG~G---~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~~-~~~leell--~~ADIVI~atGt~~iI 323 (476)
T PTZ00075 251 MIAGKTVVVCGYG---DVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGYQ-VVTLEDVV--ETADIFVTATGNKDII 323 (476)
T ss_pred CcCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCce-eccHHHHH--hcCCEEEECCCccccc
Confidence 3357789999976 8999999999999999988 34333221111 1111 11222222 223444 2234 367
Q ss_pred ChhhhhcCCCCceeecccccCCc----CCC--CC--ceee--cCCccccCC----------CCccccccccccCcchhHH
Q 006623 535 TGKEQARAPKGTIFIPYTQIPPR----KLR--KD--CFYH--STPAMIIPP----------SLSNMHSCENWLGRRVMSA 594 (638)
Q Consensus 535 ~~~~q~~a~~G~~f~~~~~~~~~----~~R--~d--c~y~--~~~a~~~P~----------~~~~~~~~e~~~p~~~~~A 594 (638)
+.+....|++|++++.+++++.+ .++ .| +.-. ......+|. .+-|+. |-.+.|..+|+-
T Consensus 324 ~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~-~~~GhP~~vMd~ 402 (476)
T PTZ00075 324 TLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLG-CATGHPSFVMSN 402 (476)
T ss_pred CHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccC-CCCCCCeeEeeH
Confidence 88999999999999999997633 122 11 1111 111122442 466787 889999999999
Q ss_pred HHHhhhhhhhcCCCCCc
Q 006623 595 WRIAGIIHALEGWDLNE 611 (638)
Q Consensus 595 c~a~~~v~alEgw~~~e 611 (638)
.++--.+-.+|=|..++
T Consensus 403 sfa~Q~la~~~l~~~~~ 419 (476)
T PTZ00075 403 SFTNQVLAQIELWENRD 419 (476)
T ss_pred HHHHHHHHHHHHHhccC
Confidence 88877777777665544
No 82
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.15 E-value=0.11 Score=55.12 Aligned_cols=153 Identities=22% Similarity=0.219 Sum_probs=98.3
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006623 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (638)
..+-+.-+....+.|++.|++..- |. +++..+++|.|- |+.+..= |++++. +=|||=
T Consensus 43 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl 122 (284)
T PRK14190 43 DPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGF 122 (284)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccccccc
Confidence 334555567778889999998754 44 334447788885 3555422 333431 123333
Q ss_pred ----------------hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006623 449 ----------------SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (638)
Q Consensus 449 ----------------sltaavv~~~-----ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (638)
.-|+..|++= |+-.-++|+++|.+. -||+-+|..|.++|-.|++ .+
T Consensus 123 ~~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~atVt~chs---------- 190 (284)
T PRK14190 123 HPINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSN--IVGKPVGQLLLNENATVTYCHS---------- 190 (284)
T ss_pred CHhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEEeC----------
Confidence 2366666653 344688999999998 9999999999999999998 22
Q ss_pred CCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc---CCCCCcee
Q 006623 507 IPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 565 (638)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y 565 (638)
...+|.+.+ -+|+.+|.++|+ .++++.. ++|+++||+. +++. ++--|+-+
T Consensus 191 ----~t~~l~~~~-~~ADIvI~AvG~p~~i~~~~i---k~gavVIDvG-i~~~~~gkl~GDvd~ 245 (284)
T PRK14190 191 ----KTKNLAELT-KQADILIVAVGKPKLITADMV---KEGAVVIDVG-VNRLENGKLCGDVDF 245 (284)
T ss_pred ----CchhHHHHH-HhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-ccccCCCCeeccCcH
Confidence 122333333 134444456664 4788777 9999999998 6652 44456553
No 83
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=94.14 E-value=0.41 Score=51.55 Aligned_cols=139 Identities=17% Similarity=0.137 Sum_probs=86.0
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006623 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (638)
Q Consensus 408 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig 478 (638)
-.|+|+++.--=|....|..-.++.+.-+|+ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+- ..|
T Consensus 64 ~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~G---~qA 140 (325)
T TIGR02371 64 MAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGAG---RQA 140 (325)
T ss_pred eEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHH
Confidence 3688888753333323333334456666655 45699999999984 2333445 5688899999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcchhchhhhccc----cccceEEEeec----CcCChhhhhcCCCCc
Q 006623 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS----YAAHKTIWLVG----DDLTGKEQARAPKGT 546 (638)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~----~~~~~i~w~vg----~~~~~~~q~~a~~G~ 546 (638)
++-+++|+ +...+|.+ |++++.+++.+++.+ .......+.+ .+.++||..+- -.++.+ +.+||+
T Consensus 141 ~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~-~g~~v~~~~~~~eav~~aDiVitaT~s~~P~~~~~---~l~~g~ 216 (325)
T TIGR02371 141 WTQLEALSRVFDLEEVSVYCRTPSTREKFALRASD-YEVPVRAATDPREAVEGCDILVTTTPSRKPVVKAD---WVSEGT 216 (325)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHh-hCCcEEEeCCHHHHhccCCEEEEecCCCCcEecHH---HcCCCC
Confidence 99888877 66667777 999998888776542 1111111112 23445552332 122333 459999
Q ss_pred eeecccc
Q 006623 547 IFIPYTQ 553 (638)
Q Consensus 547 ~f~~~~~ 553 (638)
+++.+..
T Consensus 217 ~v~~vGs 223 (325)
T TIGR02371 217 HINAIGA 223 (325)
T ss_pred EEEecCC
Confidence 9998864
No 84
>PRK09072 short chain dehydrogenase; Provisional
Probab=94.14 E-value=0.1 Score=52.97 Aligned_cols=43 Identities=26% Similarity=0.394 Sum_probs=37.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++++++
T Consensus 5 ~~~vlItG~s~--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (263)
T PRK09072 5 DKRVLLTGASG--GIGQALAEALAAAGARLLLVGRNAEKLEALAARL 49 (263)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 8888888877665
No 85
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.14 E-value=0.089 Score=56.32 Aligned_cols=154 Identities=23% Similarity=0.256 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 006623 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 449 (638)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 449 (638)
++-+.-+..-++.|++.|++.. -|. +++..+++|.|- ++.++.= |++++. +=|||=+
T Consensus 45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~ 124 (301)
T PRK14194 45 PASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFH 124 (301)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccC
Confidence 3455556677778899998764 443 334446677764 3555421 222331 1244433
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEec-chhhHHHHHhhC
Q 006623 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI-CKDDYEKLKLRI 507 (638)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~-~~~~~~~l~~~~ 507 (638)
-|++.|++=+ +-.-++|.++|..| -+|+.+|..|.++|..|++- ++.+
T Consensus 125 ~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~--ivG~PmA~~L~~~gatVtv~~~~t~-------- 194 (301)
T PRK14194 125 SENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSN--IVGKPMAALLLQAHCSVTVVHSRST-------- 194 (301)
T ss_pred hhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEECCCCC--------
Confidence 3666666544 34688999999998 99999999999999999992 2111
Q ss_pred CcchhchhhhccccccceEEEeecCcCChhhhhcCCCCceeecccccCCc------CCCCCcee
Q 006623 508 PVEAQHNLVLSTSYAAHKTIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR------KLRKDCFY 565 (638)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~i~w~vg~~~~~~~q~~a~~G~~f~~~~~~~~~------~~R~dc~y 565 (638)
++.+.+ -+++.|+..+|+. ..-+..++++|+++||++ +++. ++.-|+-+
T Consensus 195 ------~l~e~~-~~ADIVIsavg~~-~~v~~~~ik~GaiVIDvg-in~~~~~g~~kl~GDvdf 249 (301)
T PRK14194 195 ------DAKALC-RQADIVVAAVGRP-RLIDADWLKPGAVVIDVG-INRIDDDGRSRLVGDVDF 249 (301)
T ss_pred ------CHHHHH-hcCCEEEEecCCh-hcccHhhccCCcEEEEec-ccccCCCCCcceecccch
Confidence 223332 1333444666664 222233479999999999 5542 33466654
No 86
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=94.13 E-value=0.22 Score=53.10 Aligned_cols=131 Identities=14% Similarity=0.030 Sum_probs=83.2
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcCcCCCcEEEEecccCchhhHHH
Q 006623 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSLPKTTAHVLLRGTVTANKVANA 480 (638)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~ip~~~~~V~~~Gatg~~kig~a 480 (638)
.|+|+++-+ . |+-.++.+.-+|+ +.-.-+.||+.+|+ |++.+-..++.+.+.++|+- ..|+.
T Consensus 62 ~g~K~~~~~---~----~~~~g~v~L~d~~TG~p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGaG---~QA~~ 131 (301)
T PRK06407 62 AGLKTYIAG---R----NGARFVVLLFDVNNPELVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGSG---FQAET 131 (301)
T ss_pred eEEEEEecC---C----CCccEEEEEEECCCCCEEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECCc---HHHHH
Confidence 577776642 1 2222355555555 45589999999986 45556567788999999987 89999
Q ss_pred HHHHHh--ccCcEEEe--cchhhHHHHHhhCCcchhchhhhccc----cccceEE----EeecCcCChhhhhcCCCCcee
Q 006623 481 VASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS----YAAHKTI----WLVGDDLTGKEQARAPKGTIF 548 (638)
Q Consensus 481 va~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~----~~~~~i~----w~vg~~~~~~~q~~a~~G~~f 548 (638)
-++++| +.-.+|.+ |++++-+++.+++.........-+.+ .+.++|| ..-.-.++.+ +.+||+|+
T Consensus 132 ~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P~~~~~---~l~pg~hV 208 (301)
T PRK06407 132 QLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTPIFNRK---YLGDEYHV 208 (301)
T ss_pred HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCcEecHH---HcCCCceE
Confidence 999999 55555666 89999888887765433222121222 2444555 1111223444 34789998
Q ss_pred eccc
Q 006623 549 IPYT 552 (638)
Q Consensus 549 ~~~~ 552 (638)
..+-
T Consensus 209 ~aiG 212 (301)
T PRK06407 209 NLAG 212 (301)
T ss_pred EecC
Confidence 8874
No 87
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=94.12 E-value=0.078 Score=53.83 Aligned_cols=42 Identities=19% Similarity=0.305 Sum_probs=37.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++
T Consensus 5 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~ 48 (262)
T TIGR03325 5 GEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA 48 (262)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh
Confidence 46899999998 9999999999999999998 888888877654
No 88
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.12 E-value=0.089 Score=52.16 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=35.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+.+.++
T Consensus 6 ~~vlItGa~g--~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 48 (238)
T PRK05786 6 KKVAIIGVSE--GLGYAVAYFALKEGAQVCINSRNENKLKRMKKT 48 (238)
T ss_pred cEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 5899999998 9999999999999999998 777777766444
No 89
>PRK07831 short chain dehydrogenase; Provisional
Probab=94.10 E-value=0.1 Score=52.98 Aligned_cols=44 Identities=16% Similarity=0.180 Sum_probs=35.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| +-||+++|+.|+++|.+|.+ |+.++.++..+++
T Consensus 17 ~k~vlItG~sg-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~ 62 (262)
T PRK07831 17 GKVVLVTAAAG-TGIGSATARRALEEGARVVISDIHERRLGETADEL 62 (262)
T ss_pred CCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999996 35999999999999999998 7777666655443
No 90
>PRK05872 short chain dehydrogenase; Provisional
Probab=94.10 E-value=0.087 Score=54.98 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=40.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.++++
T Consensus 8 ~gk~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~ 54 (296)
T PRK05872 8 AGKVVVVTGAAR--GIGAELARRLHARGAKLALVDLEEAELAALAAELG 54 (296)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 356899999998 9999999999999999988 88899988887765
No 91
>PRK08017 oxidoreductase; Provisional
Probab=94.06 E-value=0.076 Score=53.22 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=34.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++.+.+++
T Consensus 3 k~vlVtGasg--~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~ 44 (256)
T PRK08017 3 KSVLITGCSS--GIGLEAALELKRRGYRVLAACRKPDDVARMNS 44 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh
Confidence 4799999998 9999999999999999988 88887776653
No 92
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.05 E-value=0.04 Score=56.64 Aligned_cols=101 Identities=19% Similarity=0.191 Sum_probs=65.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEeecCcCChhhhhcC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGDDLTGKEQARA 542 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~~~q~~a 542 (638)
.|+|+|+|| -||+++++.|.++|.+|.. |+.+....+. ..++ |+.++..+.+....+
T Consensus 2 ~ILVtG~tG--fiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~--------~~~~d~~~~~~~~~~ 60 (314)
T COG0451 2 RILVTGGAG--FIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-----------SGVE--------FVVLDLTDRDLVDEL 60 (314)
T ss_pred eEEEEcCcc--cHHHHHHHHHHhCCCeEEEEeCCCccccccc-----------cccc--------eeeecccchHHHHHH
Confidence 389999999 9999999999999999998 3333322111 1111 456665555333222
Q ss_pred CCCceeecccccCCcCCCCCceeecCCccccCCCCcc----ccccccccCcchhHHHHHhhh
Q 006623 543 PKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSN----MHSCENWLGRRVMSAWRIAGI 600 (638)
Q Consensus 543 ~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~----~~~~e~~~p~~~~~Ac~a~~~ 600 (638)
..+ .+ |+.++-......+....+ +..-|....+++..||.++++
T Consensus 61 ~~~-------------~~-d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~ 108 (314)
T COG0451 61 AKG-------------VP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV 108 (314)
T ss_pred Hhc-------------CC-CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 222 11 778777777766665432 445667778888888888554
No 93
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.03 E-value=0.061 Score=57.31 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=48.9
Q ss_pred EEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEeecCcCChhhhhcC
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGDDLTGKEQARA 542 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~~~q~~a 542 (638)
|+++||+| +||+.+|+.|++.+.+ +.+ +++..+..++.++.......-++.. +.-++||.-+.+....+
T Consensus 1 VLVTGa~G--SIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~------~~~vigDvrd~~~l~~~ 72 (293)
T PF02719_consen 1 VLVTGAGG--SIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFE------IVPVIGDVRDKERLNRI 72 (293)
T ss_dssp EEEETTTS--HHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEE------EE--CTSCCHHHHHHHH
T ss_pred CEEEcccc--HHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccc------cCceeecccCHHHHHHH
Confidence 78999999 9999999999988864 555 8888888998887533322101111 11367888877766544
Q ss_pred ----CCCceeeccc
Q 006623 543 ----PKGTIFIPYT 552 (638)
Q Consensus 543 ----~~G~~f~~~~ 552 (638)
.+-.+||--+
T Consensus 73 ~~~~~pdiVfHaAA 86 (293)
T PF02719_consen 73 FEEYKPDIVFHAAA 86 (293)
T ss_dssp TT--T-SEEEE---
T ss_pred HhhcCCCEEEEChh
Confidence 5556665544
No 94
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.03 E-value=0.094 Score=55.00 Aligned_cols=37 Identities=22% Similarity=0.152 Sum_probs=31.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (638)
+.|+|+|++| -||+++++.|.++|.+|.. |+.++.++
T Consensus 6 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 44 (322)
T PLN02986 6 KLVCVTGASG--YIASWIVKLLLLRGYTVKATVRDLTDRKK 44 (322)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCCcchHH
Confidence 6899999999 9999999999999999975 66654443
No 95
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=94.01 E-value=0.083 Score=53.57 Aligned_cols=44 Identities=18% Similarity=0.279 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.++++
T Consensus 6 ~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (263)
T PRK06200 6 GQVALITGGGS--GIGRALVERFLAEGARVAVLERSAEKLASLRQRFG 51 (263)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 35799999997 9999999999999999988 88888888877653
No 96
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=94.00 E-value=0.14 Score=54.76 Aligned_cols=139 Identities=18% Similarity=0.080 Sum_probs=78.8
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006623 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (638)
Q Consensus 408 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig 478 (638)
-.|+|+++.--=|....+..--++.+.-+|+ +.-+-+.||+.+|+ |++.+-+ |++.+.+.++|+- ..|
T Consensus 64 ~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGaG---~QA 140 (313)
T PF02423_consen 64 VAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGAG---VQA 140 (313)
T ss_dssp EEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE--S---HHH
T ss_pred EEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECCC---HHH
Confidence 4688888865444444443333455555554 34588999999984 3333333 6778899999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcchhchhhhcccc----ccceEE----Eeec--CcCChhhhhcCCC
Q 006623 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY----AAHKTI----WLVG--DDLTGKEQARAPK 544 (638)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~----~~~~i~----w~vg--~~~~~~~q~~a~~ 544 (638)
+.-+++|+ +.-.+|.+ |++++-+++.+++.. .......+.+. +.++|| ..-. -.++.+ +.+|
T Consensus 141 ~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDii~taT~s~~~~P~~~~~---~l~~ 216 (313)
T PF02423_consen 141 RWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVRGADIIVTATPSTTPAPVFDAE---WLKP 216 (313)
T ss_dssp HHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHTTSSEEEE----SSEEESB-GG---GS-T
T ss_pred HHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcccCCEEEEccCCCCCCccccHH---HcCC
Confidence 99999998 45445555 999999998888665 33332233332 344555 1111 233433 5589
Q ss_pred Cceeecccc
Q 006623 545 GTIFIPYTQ 553 (638)
Q Consensus 545 G~~f~~~~~ 553 (638)
|+++..+.-
T Consensus 217 g~hi~~iGs 225 (313)
T PF02423_consen 217 GTHINAIGS 225 (313)
T ss_dssp T-EEEE-S-
T ss_pred CcEEEEecC
Confidence 999888875
No 97
>PRK07062 short chain dehydrogenase; Provisional
Probab=93.97 E-value=0.071 Score=54.07 Aligned_cols=44 Identities=16% Similarity=0.190 Sum_probs=37.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
..+.++++|+++ .||+++|+.|+++|.+|.+ |+.++++++.+++
T Consensus 7 ~~k~~lItGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 52 (265)
T PRK07062 7 EGRVAVVTGGSS--GIGLATVELLLEAGASVAICGRDEERLASAEARL 52 (265)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 356899999997 9999999999999999988 8888887766554
No 98
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.96 E-value=0.076 Score=56.34 Aligned_cols=44 Identities=20% Similarity=0.289 Sum_probs=37.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++||++ =||.++|..|+++|.++.+ |..+|++++++++.
T Consensus 12 ~kvVvITGASs--GIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~ 57 (282)
T KOG1205|consen 12 GKVVLITGASS--GIGEALAYELAKRGAKLVLVARRARRLERVAEELR 57 (282)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHH
Confidence 56789999995 9999999999999999777 88888888866643
No 99
>PRK06924 short chain dehydrogenase; Provisional
Probab=93.95 E-value=0.086 Score=52.80 Aligned_cols=40 Identities=25% Similarity=0.369 Sum_probs=33.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKL 505 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~ 505 (638)
+.|+++|++| -||+++|+.|+++|.+|++ |++ ++++++.+
T Consensus 2 k~vlItGasg--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~ 44 (251)
T PRK06924 2 RYVIITGTSQ--GLGEAIANQLLEKGTHVISISRTENKELTKLAE 44 (251)
T ss_pred cEEEEecCCc--hHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh
Confidence 4799999998 9999999999999999988 655 45555543
No 100
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.94 E-value=0.11 Score=52.84 Aligned_cols=43 Identities=14% Similarity=0.301 Sum_probs=35.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (638)
.+.|+++|+++ -||+++|+.|+++|.+|.+ +++++.+++.+++
T Consensus 8 ~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 53 (260)
T PRK08416 8 GKTLVISGGTR--GIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDL 53 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 46899999997 9999999999999999987 4566666655443
No 101
>PRK06180 short chain dehydrogenase; Provisional
Probab=93.90 E-value=0.09 Score=54.03 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=37.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+.+++.
T Consensus 4 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~ 47 (277)
T PRK06180 4 MKTWLITGVSS--GFGRALAQAALAAGHRVVGTVRSEAARADFEAL 47 (277)
T ss_pred CCEEEEecCCC--hHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh
Confidence 45799999998 9999999999999999998 888888877664
No 102
>PRK06139 short chain dehydrogenase; Provisional
Probab=93.90 E-value=0.074 Score=57.04 Aligned_cols=43 Identities=14% Similarity=0.255 Sum_probs=38.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 7 ~k~vlITGAs~--GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~ 51 (330)
T PRK06139 7 GAVVVITGASS--GIGQATAEAFARRGARLVLAARDEEALQAVAEEC 51 (330)
T ss_pred CCEEEEcCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999997 9999999999999999999 8999988877664
No 103
>PRK06138 short chain dehydrogenase; Provisional
Probab=93.90 E-value=0.11 Score=51.77 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=36.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.++++|++| .||+++|+.|.++|.+|.+ |+.++.++..+++
T Consensus 5 ~k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 49 (252)
T PRK06138 5 GRVAIVTGAGS--GIGRATAKLFAREGARVVVADRDAEAAERVAAAI 49 (252)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 7777766655543
No 104
>PRK07102 short chain dehydrogenase; Provisional
Probab=93.89 E-value=0.11 Score=52.06 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=34.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
++|+++|++| -||+++|+.|+++|.+|++ |++++.+.+.++
T Consensus 2 ~~vlItGas~--giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~ 44 (243)
T PRK07102 2 KKILIIGATS--DIARACARRYAAAGARLYLAARDVERLERLADD 44 (243)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHH
Confidence 4799999998 9999999999999999988 777776655444
No 105
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.88 E-value=0.18 Score=53.52 Aligned_cols=165 Identities=18% Similarity=0.163 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC-
Q 006623 393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS- 448 (638)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn- 448 (638)
.+-+.-+..-++.|++.|++. .-|. +++..++||.|- ++.++.= |++++. +=|||=
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~ 123 (284)
T PRK14193 44 PGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLH 123 (284)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCC
Confidence 345555677778899999986 4444 333446788774 3555522 332331 224443
Q ss_pred ---------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhc--cCcEEEe-cchhhHHHHHh
Q 006623 449 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT-ICKDDYEKLKL 505 (638)
Q Consensus 449 ---------------sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~--~~~~v~~-~~~~~~~~l~~ 505 (638)
.-|+..|++=+ +-.-++|+++|.+. -||+-+|..|.+ +|..|++ .++
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~~~atVtvchs~-------- 193 (284)
T PRK14193 124 PTNLGRLVLNEPAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGV--TVGRPIGLLLTRRSENATVTLCHTG-------- 193 (284)
T ss_pred hhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHhhccCCCEEEEeCCC--------
Confidence 23666666544 44678999999998 999999999997 7899998 221
Q ss_pred hCCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc---CCCCCce----eecCCccccCCC
Q 006623 506 RIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF----YHSTPAMIIPPS 576 (638)
Q Consensus 506 ~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~----y~~~~a~~~P~~ 576 (638)
..+|.+.+ -+|+.+|.++|+ .++++.. ++|+++||+. +++. ++.-|+- -.-.....||+.
T Consensus 194 ------T~~l~~~~-k~ADIvV~AvGkp~~i~~~~i---k~GavVIDvG-in~~~~gkl~GDvd~~v~~~a~~iTPVPGG 262 (284)
T PRK14193 194 ------TRDLAAHT-RRADIIVAAAGVAHLVTADMV---KPGAAVLDVG-VSRAGDGKLVGDVHPDVWEVAGAVSPNPGG 262 (284)
T ss_pred ------CCCHHHHH-HhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-ccccCCCcEEeecCHhHHhhCCEEeCCCCC
Confidence 23444433 245555567775 5777777 9999999998 6662 3334444 222223457776
Q ss_pred Cc
Q 006623 577 LS 578 (638)
Q Consensus 577 ~~ 578 (638)
+.
T Consensus 263 VG 264 (284)
T PRK14193 263 VG 264 (284)
T ss_pred hh
Confidence 54
No 106
>PRK05866 short chain dehydrogenase; Provisional
Probab=93.88 E-value=0.099 Score=54.73 Aligned_cols=43 Identities=23% Similarity=0.346 Sum_probs=37.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 40 ~k~vlItGasg--gIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l 84 (293)
T PRK05866 40 GKRILLTGASS--GIGEAAAEQFARRGATVVAVARREDLLDAVADRI 84 (293)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 8888888776654
No 107
>PRK12829 short chain dehydrogenase; Provisional
Probab=93.87 E-value=0.088 Score=52.94 Aligned_cols=44 Identities=18% Similarity=0.373 Sum_probs=37.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
..++|+++|++| .||+++|+.|+++|.+|++ |++++.++++++.
T Consensus 10 ~~~~vlItGa~g--~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~ 55 (264)
T PRK12829 10 DGLRVLVTGGAS--GIGRAIAEAFAEAGARVHVCDVSEAALAATAARL 55 (264)
T ss_pred CCCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 347899999998 9999999999999999988 8777777776554
No 108
>PRK05717 oxidoreductase; Validated
Probab=93.83 E-value=0.11 Score=52.36 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=36.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+ +++++.+++.+++
T Consensus 9 ~~k~vlItG~sg--~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~ 54 (255)
T PRK05717 9 NGRVALVTGAAR--GIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL 54 (255)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc
Confidence 456899999998 9999999999999999988 6766666655443
No 109
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.82 E-value=0.11 Score=52.11 Aligned_cols=42 Identities=19% Similarity=0.318 Sum_probs=35.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
++|+++|++| -||+++++.|+++|.+|++ |+.++.+++.+++
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l 44 (254)
T TIGR02415 1 KVALVTGGAQ--GIGKGIAERLAKDGFAVAVADLNEETAKETAKEI 44 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4689999998 9999999999999999988 7766666655443
No 110
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=93.80 E-value=0.1 Score=52.52 Aligned_cols=45 Identities=16% Similarity=0.159 Sum_probs=37.8
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
...+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++++.+++
T Consensus 9 ~~~k~ilItGas~--~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 55 (256)
T PRK06124 9 LAGQVALVTGSAR--GLGFEIARALAGAGAHVLVNGRNAATLEAAVAAL 55 (256)
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence 3467899999998 9999999999999999999 7777777665553
No 111
>PRK08643 acetoin reductase; Validated
Probab=93.73 E-value=0.097 Score=52.69 Aligned_cols=42 Identities=21% Similarity=0.268 Sum_probs=36.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++
T Consensus 3 k~~lItGas~--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 46 (256)
T PRK08643 3 KVALVTGAGQ--GIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKL 46 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 7777777776654
No 112
>PRK06057 short chain dehydrogenase; Provisional
Probab=93.73 E-value=0.1 Score=52.65 Aligned_cols=44 Identities=16% Similarity=0.122 Sum_probs=37.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++.
T Consensus 7 ~~~vlItGasg--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 52 (255)
T PRK06057 7 GRVAVITGGGS--GIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG 52 (255)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Confidence 36899999998 9999999999999999988 77777777766543
No 113
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=93.73 E-value=0.15 Score=56.79 Aligned_cols=153 Identities=19% Similarity=0.190 Sum_probs=88.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcchhchhhhccc-cccceEE-Eeec---Cc
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS-YAAHKTI-WLVG---DD 533 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~i~-w~vg---~~ 533 (638)
..++|+++|+ | .+|+.++++|++.| .+|++ |+.++.+++.++++.... ...+..+ ...+|+| ...| -.
T Consensus 179 ~~~~VlViGa-G--~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i-~~~~l~~~l~~aDvVi~aT~s~~~i 254 (417)
T TIGR01035 179 KGKKALLIGA-G--EMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAV-KFEDLEEYLAEADIVISSTGAPHPI 254 (417)
T ss_pred cCCEEEEECC-h--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEe-eHHHHHHHHhhCCEEEECCCCCCce
Confidence 4578999998 7 99999999999999 56777 888888888777653211 1111111 1223343 2222 23
Q ss_pred CChhhhhcCC----CCceeecccccCCc---CC--CCCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhh--
Q 006623 534 LTGKEQARAP----KGTIFIPYTQIPPR---KL--RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH-- 602 (638)
Q Consensus 534 ~~~~~q~~a~----~G~~f~~~~~~~~~---~~--R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~-- 602 (638)
+++++.+.+. .+.+++|.+ +|+. +. -+++.+. .-++++.+ ++..+..|.-.+=.|+.||-
T Consensus 255 i~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~------~vDdl~~~--~~~n~~~r~~~~~~a~~ii~~~ 325 (417)
T TIGR01035 255 VSKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLY------DVDDLQPV--VEENLAERREEAEKAEEIVEEE 325 (417)
T ss_pred EcHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEE------EHHHHHHH--HHHhHHHHHHHHHHHHHHHHHH
Confidence 5666665442 356889998 6554 11 1222211 11122211 33355556666678888876
Q ss_pred --hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006623 603 --ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 627 (638)
Q Consensus 603 --alEgw~~~-e~G~-i--v-~~i~~i~~aa~ 627 (638)
+++.|... ..-. | + ++++++-+.-+
T Consensus 326 ~~~f~~w~~~~~~~p~I~~lr~~~~~i~~~el 357 (417)
T TIGR01035 326 TAEFKQWLRSLEVEPTIKALRSLAEIVREKEL 357 (417)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 67777654 5555 4 3 66666544433
No 114
>PRK06182 short chain dehydrogenase; Validated
Probab=93.71 E-value=0.1 Score=53.29 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=35.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+.++++++.+
T Consensus 3 ~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~l~~~~~ 45 (273)
T PRK06182 3 KKVALVTGASS--GIGKATARRLAAQGYTVYGAARRVDKMEDLAS 45 (273)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 36799999998 9999999999999999998 88888776653
No 115
>PRK06141 ornithine cyclodeaminase; Validated
Probab=93.69 E-value=0.34 Score=51.87 Aligned_cols=97 Identities=24% Similarity=0.227 Sum_probs=66.5
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006623 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (638)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig~ 479 (638)
.|+|+++---=|....+-.--++.+.-+++ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+ | ..|+
T Consensus 62 ~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~-G--~~a~ 138 (314)
T PRK06141 62 IGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGT-G--RLAS 138 (314)
T ss_pred eEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECC-c--HHHH
Confidence 588888843323222232222355666665 45599999999984 2333333 567889999996 5 8999
Q ss_pred HHHHHHh--ccCcEEEe--cchhhHHHHHhhCC
Q 006623 480 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 480 ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.++++++ +...+|.+ |++++.+++.+++.
T Consensus 139 ~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~ 171 (314)
T PRK06141 139 LLALAHASVRPIKQVRVWGRDPAKAEALAAELR 171 (314)
T ss_pred HHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 9999888 34466777 88899998888754
No 116
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=93.69 E-value=0.16 Score=51.10 Aligned_cols=142 Identities=16% Similarity=0.144 Sum_probs=91.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-CCcchhchhhhccccccc--eEEEeecCcCChhhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAAH--KTIWLVGDDLTGKEQ 539 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~--~i~w~vg~~~~~~~q 539 (638)
+|.++||+| ++|+.|+.-..+||.+|+- ||..+...+|.. +.+...-+|..+.+--++ -|+...|.+.+.+|.
T Consensus 2 KIaiIgAsG--~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~ 79 (211)
T COG2910 2 KIAIIGASG--KAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDNDE 79 (211)
T ss_pred eEEEEecCc--hhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCCCCChhH
Confidence 689999999 9999999999999999998 999888655443 332222222221111011 233677776444443
Q ss_pred -----------------------------hcCCCCceeecccccCCc-------------CCC----CCceeecCCcccc
Q 006623 540 -----------------------------ARAPKGTIFIPYTQIPPR-------------KLR----KDCFYHSTPAMII 573 (638)
Q Consensus 540 -----------------------------~~a~~G~~f~~~~~~~~~-------------~~R----~dc~y~~~~a~~~ 573 (638)
.-+-+|+..+|.-+||.+ .+| -|-+|.+-+++-.
T Consensus 80 ~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~ 159 (211)
T COG2910 80 LHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFE 159 (211)
T ss_pred HHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcC
Confidence 113456777777777753 122 5778999999999
Q ss_pred CCCCcc-cc------ccccccCcchhHHHHHhhhhhhhcCCC
Q 006623 574 PPSLSN-MH------SCENWLGRRVMSAWRIAGIIHALEGWD 608 (638)
Q Consensus 574 P~~~~~-~~------~~e~~~p~~~~~Ac~a~~~v~alEgw~ 608 (638)
|++=.| +. -.|-.=..|..+|=-|.+|+-++|.=.
T Consensus 160 PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~ 201 (211)
T COG2910 160 PGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ 201 (211)
T ss_pred CccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc
Confidence 974211 00 022223467788899999999999733
No 117
>PRK05599 hypothetical protein; Provisional
Probab=93.66 E-value=0.13 Score=52.17 Aligned_cols=41 Identities=22% Similarity=0.390 Sum_probs=35.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.|+++|+++ -||+++|+.|++ |.+|.+ |++++.+++.+++.
T Consensus 2 ~vlItGas~--GIG~aia~~l~~-g~~Vil~~r~~~~~~~~~~~l~ 44 (246)
T PRK05599 2 SILILGGTS--DIAGEIATLLCH-GEDVVLAARRPEAAQGLASDLR 44 (246)
T ss_pred eEEEEeCcc--HHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHH
Confidence 589999997 999999999995 999999 88899988877653
No 118
>PRK08251 short chain dehydrogenase; Provisional
Probab=93.66 E-value=0.093 Score=52.44 Aligned_cols=42 Identities=21% Similarity=0.363 Sum_probs=36.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 3 k~vlItGas~--giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 46 (248)
T PRK08251 3 QKILITGASS--GLGAGMAREFAAKGRDLALCARRTDRLEELKAEL 46 (248)
T ss_pred CEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 8888887776654
No 119
>PRK08862 short chain dehydrogenase; Provisional
Probab=93.63 E-value=0.091 Score=53.01 Aligned_cols=43 Identities=5% Similarity=0.156 Sum_probs=37.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.++++|+++ -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 5 ~k~~lVtGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i 49 (227)
T PRK08862 5 SSIILITSAGS--VLGRTISCHFARLGATLILCDQDQSALKDTYEQC 49 (227)
T ss_pred CeEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 46899999997 9999999999999999999 8888888776554
No 120
>PRK09135 pteridine reductase; Provisional
Probab=93.62 E-value=0.15 Score=50.61 Aligned_cols=42 Identities=21% Similarity=0.350 Sum_probs=33.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~ 506 (638)
.+.|+++|++| -||+.+|+.|+++|.+|.+ | ++++.+.++++
T Consensus 6 ~~~vlItGa~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (249)
T PRK09135 6 AKVALITGGAR--RIGAAIARTLHAAGYRVAIHYHRSAAEADALAAE 50 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 46899999998 9999999999999999988 4 34445555443
No 121
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=93.62 E-value=0.11 Score=52.37 Aligned_cols=41 Identities=22% Similarity=0.333 Sum_probs=36.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++
T Consensus 2 ~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 44 (248)
T PRK10538 2 IVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDEL 44 (248)
T ss_pred EEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 589999998 9999999999999999998 8888888776654
No 122
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.62 E-value=0.13 Score=54.83 Aligned_cols=142 Identities=20% Similarity=0.221 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006623 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (638)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 442 (638)
+-+.-+...++.|++.|++.-- |. ++...++||.|- ++.++.= |++++.
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~ 124 (294)
T PRK14187 45 ASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHN 124 (294)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 4445566677889999988654 42 233346778874 3555522 332431
Q ss_pred ----eeecCC---hh---HHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006623 443 ----KVVDGS---SL---AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (638)
Q Consensus 443 ----rvv~Gn---sl---taavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (638)
|+..|+ .+ |++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .+
T Consensus 125 ~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVt~chs---------- 192 (294)
T PRK14187 125 ENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSN--IVGKPMACLLLGENCTVTTVHS---------- 192 (294)
T ss_pred hhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhhCCCEEEEeCC----------
Confidence 333444 22 777766544 44688999999998 9999999999999999999 22
Q ss_pred CCcchhchhhhccccccceEEEeecCc--CChhhhhcCCCCceeecccccCC
Q 006623 507 IPVEAQHNLVLSTSYAAHKTIWLVGDD--LTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~i~w~vg~~--~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
...+|.+.+ -+|+.+|.++|+- ++++.. ++|+++||+- +.+
T Consensus 193 ----~T~~l~~~~-~~ADIvVsAvGkp~~i~~~~i---k~gaiVIDVG-in~ 235 (294)
T PRK14187 193 ----ATRDLADYC-SKADILVAAVGIPNFVKYSWI---KKGAIVIDVG-INS 235 (294)
T ss_pred ----CCCCHHHHH-hhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 123333333 2455566788876 888887 8999999996 544
No 123
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=93.61 E-value=0.083 Score=49.40 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=33.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cc--hhhHHHHHhhCC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--IC--KDDYEKLKLRIP 508 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~--~~~~~~l~~~~~ 508 (638)
|.|+++|+++ -||+++|+.|+++ +.+|.+ |+ .++.+++.++++
T Consensus 1 k~~lItGa~~--giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~ 48 (167)
T PF00106_consen 1 KTVLITGASS--GIGRALARALARRGARVVILTSRSEDSEGAQELIQELK 48 (167)
T ss_dssp EEEEEETTTS--HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCC--HHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence 5789999997 9999999999988 556566 66 667777755544
No 124
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.59 E-value=0.13 Score=54.68 Aligned_cols=152 Identities=22% Similarity=0.234 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 006623 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 449 (638)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 449 (638)
.+-+.-+...++.|++.|++.. -|. +++..++||.|- |+.++.= |++++. +=|||=+
T Consensus 44 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~ 123 (284)
T PRK14179 44 PASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFH 123 (284)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccC
Confidence 3445556666778888888764 344 233336777764 3555421 222331 1234432
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006623 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (638)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (638)
-|++.|++=+ +-.-++|.++|..| -+|+.+|..|.++|..|++ .++.
T Consensus 124 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~--ivG~Pla~lL~~~gatVtv~~s~t--------- 192 (284)
T PRK14179 124 PMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSN--IVGKPMAQLLLDKNATVTLTHSRT--------- 192 (284)
T ss_pred HhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cCcHHHHHHHHHCCCEEEEECCCC---------
Confidence 4666666544 44678999999998 9999999999999999999 2211
Q ss_pred CcchhchhhhccccccceEEEeecCc--CChhhhhcCCCCceeecccccCCc---CCCCCcee
Q 006623 508 PVEAQHNLVLSTSYAAHKTIWLVGDD--LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 565 (638)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~i~w~vg~~--~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y 565 (638)
.++.+.+ -+++.++..+|+. ++++ +.++|+++||++ +.+. ++.-|+-+
T Consensus 193 -----~~l~~~~-~~ADIVI~avg~~~~v~~~---~ik~GavVIDvg-in~~~~gkl~GDVdf 245 (284)
T PRK14179 193 -----RNLAEVA-RKADILVVAIGRGHFVTKE---FVKEGAVVIDVG-MNRDENGKLIGDVDF 245 (284)
T ss_pred -----CCHHHHH-hhCCEEEEecCccccCCHH---HccCCcEEEEec-ceecCCCCeecCccH
Confidence 1333333 1333344566653 4444 369999999999 6652 44466553
No 125
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.58 E-value=0.17 Score=53.81 Aligned_cols=150 Identities=25% Similarity=0.286 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh-
Q 006623 394 AINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS- 449 (638)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns- 449 (638)
+-+.-+...++.|++.|++..-. . +++..++||.|- ++.++.= |++++. +=|||=+
T Consensus 45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~ 124 (285)
T PRK14189 45 ASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHV 124 (285)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCCh
Confidence 44555667777899999887543 2 233346788874 2555422 333441 2245543
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006623 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (638)
Q Consensus 450 ---------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (638)
-|+..|++=+ +-..++|+++|.++ -||+-+|..|.++|..|++ .+
T Consensus 125 ~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVt~~hs------------ 190 (285)
T PRK14189 125 ANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSN--IVGKPMAMLLLQAGATVTICHS------------ 190 (285)
T ss_pred hhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEecC------------
Confidence 2566665543 44688999999997 8899999999999999998 21
Q ss_pred cchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006623 509 VEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 564 (638)
Q Consensus 509 ~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 564 (638)
...+|.+.+ -+||.+|.++|+ .++++.. ++|+++||+. +++. ++--|+-
T Consensus 191 --~t~~l~~~~-~~ADIVV~avG~~~~i~~~~i---k~gavVIDVG-in~~~~gkl~GDVd 244 (285)
T PRK14189 191 --KTRDLAAHT-RQADIVVAAVGKRNVLTADMV---KPGATVIDVG-MNRDDAGKLCGDVD 244 (285)
T ss_pred --CCCCHHHHh-hhCCEEEEcCCCcCccCHHHc---CCCCEEEEcc-ccccCCCCeeCCcc
Confidence 122333233 134445566664 3566444 9999999998 6652 3445554
No 126
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.57 E-value=0.16 Score=54.12 Aligned_cols=151 Identities=21% Similarity=0.209 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcc------------------
Q 006623 393 EAINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLK------------------ 441 (638)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~------------------ 441 (638)
.+-+.-++.-++.|++.|++..-.= +++..++||.|- |+.++.= |++++
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~ 123 (288)
T PRK14171 44 PASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFH 123 (288)
T ss_pred ccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCC
Confidence 3444556667778889998765432 334446777774 3555421 22222
Q ss_pred ----eeeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006623 442 ----IKVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (638)
Q Consensus 442 ----irvv~Gn-----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (638)
=|+..|+ .-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .+
T Consensus 124 ~~N~g~l~~g~~~~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~--iVGkPla~lL~~~~ATVtichs---------- 191 (288)
T PRK14171 124 PLNVGYLHSGISQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSN--IVGKPLSALLLKENCSVTICHS---------- 191 (288)
T ss_pred ccchhhhhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCC----------
Confidence 1233443 34666666544 34678999999998 9999999999999999998 22
Q ss_pred CCcchhchhhhccccccceEEEeecCc--CChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006623 507 IPVEAQHNLVLSTSYAAHKTIWLVGDD--LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 564 (638)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~i~w~vg~~--~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 564 (638)
...+|.+.+ -+|+.+|.++|+- ++++.. ++|+++||+. +... ++.-|+-
T Consensus 192 ----~T~~L~~~~-~~ADIvV~AvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd 245 (288)
T PRK14171 192 ----KTHNLSSIT-SKADIVVAAIGSPLKLTAEYF---NPESIVIDVG-INRISGNKIIGDVD 245 (288)
T ss_pred ----CCCCHHHHH-hhCCEEEEccCCCCccCHHHc---CCCCEEEEee-ccccCCCCeECCcc
Confidence 223444444 2455555677763 777777 9999999998 6663 4446655
No 127
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=93.55 E-value=0.082 Score=50.86 Aligned_cols=105 Identities=22% Similarity=0.244 Sum_probs=63.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEE-EeecCcCChhh--
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTI-WLVGDDLTGKE-- 538 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~-w~vg~~~~~~~-- 538 (638)
++|-++|-- ..|+++|+.|.+.|.+|.. |++++.++++++-. ....++.++. +.+++| ..+-+.-.-++
T Consensus 2 ~~Ig~IGlG---~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~-~~~~s~~e~~--~~~dvvi~~v~~~~~v~~v~ 75 (163)
T PF03446_consen 2 MKIGFIGLG---NMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGA-EVADSPAEAA--EQADVVILCVPDDDAVEAVL 75 (163)
T ss_dssp BEEEEE--S---HHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTE-EEESSHHHHH--HHBSEEEE-SSSHHHHHHHH
T ss_pred CEEEEEchH---HHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhh-hhhhhhhhHh--hcccceEeecccchhhhhhh
Confidence 478899984 9999999999999999999 88999999987732 1112222221 111233 22222111111
Q ss_pred -----hhcCCCCceeecccccCCc-------CCC-CCceeecCCccccC
Q 006623 539 -----QARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIP 574 (638)
Q Consensus 539 -----q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P 574 (638)
...+++|+++++.+-.+|+ +++ +.+.|.+.|.+--|
T Consensus 76 ~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~ 124 (163)
T PF03446_consen 76 FGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSGGP 124 (163)
T ss_dssp HCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHH
T ss_pred hhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeeccc
Confidence 2346899999999998887 222 67889988876544
No 128
>PRK12742 oxidoreductase; Provisional
Probab=93.55 E-value=0.12 Score=51.27 Aligned_cols=43 Identities=23% Similarity=0.258 Sum_probs=35.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|.++|.+|.+ +++++.+++.++.
T Consensus 6 ~k~vlItGasg--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~ 51 (237)
T PRK12742 6 GKKVLVLGGSR--GIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET 51 (237)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh
Confidence 46899999998 9999999999999999876 4566777765553
No 129
>PRK06046 alanine dehydrogenase; Validated
Probab=93.54 E-value=0.42 Score=51.44 Aligned_cols=139 Identities=16% Similarity=0.181 Sum_probs=83.4
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006623 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (638)
Q Consensus 408 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig 478 (638)
..|+|+++.--=|..+.+..-.++.+.-+++ +.-.-+.||+.+|+ |++.+-+ +++.+.|.++|+- ..|
T Consensus 65 ~~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~G---~qa 141 (326)
T PRK06046 65 IAGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGAG---NQA 141 (326)
T ss_pred eEEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence 4678888764334333333333355555554 35589999999985 2333555 6788899999987 789
Q ss_pred HHHHHHHh-ccCcEEEe---cchhhHHHHHhhCCcchhchhhhccc----cccceEEEeecC----cCChhhhhcCCCCc
Q 006623 479 NAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTS----YAAHKTIWLVGD----DLTGKEQARAPKGT 546 (638)
Q Consensus 479 ~ava~~L~-~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~----~~~~~i~w~vg~----~~~~~~q~~a~~G~ 546 (638)
++.++.|+ .++++... |++++.+++++++.+..........+ .+ +++|..+-- .++.+ +.++|+
T Consensus 142 ~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~P~~~~~---~l~~g~ 217 (326)
T PRK06046 142 RTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRKPVVKAE---WIKEGT 217 (326)
T ss_pred HHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCCcEecHH---HcCCCC
Confidence 99999998 44555544 88888888877754321111110111 12 355422211 12223 448999
Q ss_pred eeecccc
Q 006623 547 IFIPYTQ 553 (638)
Q Consensus 547 ~f~~~~~ 553 (638)
++..+.-
T Consensus 218 hV~~iGs 224 (326)
T PRK06046 218 HINAIGA 224 (326)
T ss_pred EEEecCC
Confidence 9888863
No 130
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=93.51 E-value=0.19 Score=53.10 Aligned_cols=61 Identities=18% Similarity=0.175 Sum_probs=44.2
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCC
Q 006623 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~ 508 (638)
|||-....+.--+......++|++.|+- -.|+|+|..|++.|+ ++++ |+.++-++|.+++.
T Consensus 109 TD~~G~~~~l~~~~~~~~~k~vlIlGaG---Gaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~ 172 (284)
T PRK12549 109 TDWSGFAESFRRGLPDASLERVVQLGAG---GAGAAVAHALLTLGVERLTIFDVDPARAAALADELN 172 (284)
T ss_pred CCHHHHHHHHHhhccCccCCEEEEECCc---HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence 5555555544321122345789999998 479999999999998 6777 88899998887653
No 131
>PRK05876 short chain dehydrogenase; Provisional
Probab=93.48 E-value=0.097 Score=54.12 Aligned_cols=43 Identities=12% Similarity=0.215 Sum_probs=36.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 6 ~k~vlVTGas~--gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l 50 (275)
T PRK05876 6 GRGAVITGGAS--GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHL 50 (275)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35799999997 9999999999999999998 7777777665554
No 132
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=93.47 E-value=0.12 Score=52.33 Aligned_cols=43 Identities=16% Similarity=0.249 Sum_probs=36.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 12 ~k~ilItGa~g--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i 56 (259)
T PRK08213 12 GKTALVTGGSR--GLGLQIAEALGEAGARVVLSARKAEELEEAAAHL 56 (259)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8777777665543
No 133
>PRK08703 short chain dehydrogenase; Provisional
Probab=93.46 E-value=0.1 Score=52.07 Aligned_cols=43 Identities=21% Similarity=0.270 Sum_probs=37.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 6 ~k~vlItG~sg--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (239)
T PRK08703 6 DKTILVTGASQ--GLGEQVAKAYAAAGATVILVARHQKKLEKVYDAI 50 (239)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH
Confidence 36899999998 9999999999999999998 8888887776654
No 134
>PRK06197 short chain dehydrogenase; Provisional
Probab=93.46 E-value=0.1 Score=54.42 Aligned_cols=41 Identities=17% Similarity=0.155 Sum_probs=34.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.++..
T Consensus 15 ~~k~vlItGas~--gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~ 57 (306)
T PRK06197 15 SGRVAVVTGANT--GLGYETAAALAAKGAHVVLAVRNLDKGKAAA 57 (306)
T ss_pred CCCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 457899999998 9999999999999999877 7777655443
No 135
>PRK09291 short chain dehydrogenase; Provisional
Probab=93.45 E-value=0.12 Score=51.89 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=34.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.|+|+|++| -||+++++.|+++|.+|.. |+.++.+++++.
T Consensus 3 ~~vlVtGasg--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 45 (257)
T PRK09291 3 KTILITGAGS--GFGREVALRLARKGHNVIAGVQIAPQVTALRAE 45 (257)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4799999998 9999999999999999988 776666665543
No 136
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.42 E-value=0.17 Score=53.70 Aligned_cols=164 Identities=17% Similarity=0.191 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006623 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (638)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 442 (638)
+-+.-+...++.|++.|++..- |. +++.++++|.|- |+.++.= |++++.
T Consensus 43 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~ 122 (282)
T PRK14182 43 ASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHP 122 (282)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCH
Confidence 4455566777889999998754 32 333346788874 3555522 333441
Q ss_pred ----eeecCC-----hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006623 443 ----KVVDGS-----SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (638)
Q Consensus 443 ----rvv~Gn-----sltaavv~~~-----ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (638)
|+..|+ .-|++.|++= |+-.-++|+++|... -||+-+|..|.++|-.|++ .++
T Consensus 123 ~n~g~l~~g~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~AtVtichs~---------- 190 (282)
T PRK14182 123 FNVGALSIGIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSN--IVGKPMAMMLLERHATVTIAHSR---------- 190 (282)
T ss_pred hHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCC----------
Confidence 222232 2366666653 344688999999998 9999999999999999999 211
Q ss_pred CcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc---CCCCCceeec-----CCccccCCCC
Q 006623 508 PVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMIIPPSL 577 (638)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~~P~~~ 577 (638)
..+|.+.+ -+|+.+|.++|+ -++++.. ++|+++||+. +... ++.-|+-+.+ .....||+.+
T Consensus 191 ----T~nl~~~~-~~ADIvI~AvGk~~~i~~~~i---k~gaiVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTPVPGGV 261 (282)
T PRK14182 191 ----TADLAGEV-GRADILVAAIGKAELVKGAWV---KEGAVVIDVG-MNRLADGKLVGDVEFAAAAARASAITPVPGGV 261 (282)
T ss_pred ----CCCHHHHH-hhCCEEEEecCCcCccCHHHc---CCCCEEEEee-ceecCCCCeeCCCCHHHHHhhccEecCCCCCC
Confidence 22333333 134445567775 4677766 9999999998 6662 4446654322 2224466654
Q ss_pred c
Q 006623 578 S 578 (638)
Q Consensus 578 ~ 578 (638)
.
T Consensus 262 G 262 (282)
T PRK14182 262 G 262 (282)
T ss_pred h
Confidence 4
No 137
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=93.40 E-value=0.094 Score=52.10 Aligned_cols=43 Identities=26% Similarity=0.366 Sum_probs=35.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 6 ~~~ilItGasg--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (251)
T PRK12826 6 GRVALVTGAAR--GIGRAIAVRLAADGAEVIVVDICGDDAAATAELV 50 (251)
T ss_pred CCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35799999998 9999999999999999988 7766666554443
No 138
>PRK12828 short chain dehydrogenase; Provisional
Probab=93.39 E-value=0.12 Score=50.86 Aligned_cols=38 Identities=21% Similarity=0.190 Sum_probs=32.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (638)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.++
T Consensus 7 ~k~vlItGatg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~ 46 (239)
T PRK12828 7 GKVVAITGGFG--GLGRATAAWLAARGARVALIGRGAAPLSQ 46 (239)
T ss_pred CCEEEEECCCC--cHhHHHHHHHHHCCCeEEEEeCChHhHHH
Confidence 46799999998 9999999999999999888 76655443
No 139
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.37 E-value=0.19 Score=53.43 Aligned_cols=166 Identities=20% Similarity=0.225 Sum_probs=103.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------------
Q 006623 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI---------------- 442 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i---------------- 442 (638)
..+-+.-+..-.+.|++.|++..- |. +++.+++||.|- ++.++.= |++++.
T Consensus 41 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl 120 (282)
T PRK14166 41 NPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGF 120 (282)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 334555566677789999988543 43 233346788773 3555421 222331
Q ss_pred ------eeecC-C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHh
Q 006623 443 ------KVVDG-S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKL 505 (638)
Q Consensus 443 ------rvv~G-n----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~ 505 (638)
|+..| + .-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ .++
T Consensus 121 ~~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVt~chs~-------- 190 (282)
T PRK14166 121 HPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIK-------- 190 (282)
T ss_pred ChhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCC--------
Confidence 22334 1 34666666544 34678999999998 9999999999999999998 211
Q ss_pred hCCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc---CCCCCceeec-----CCccccCC
Q 006623 506 RIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMIIPP 575 (638)
Q Consensus 506 ~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~~P~ 575 (638)
..+|.+.+ -+|+.+|.++|+ -++++.. ++|+++||+. +.+. ++--||-+.. .....||+
T Consensus 191 ------T~nl~~~~-~~ADIvIsAvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTPVPG 259 (282)
T PRK14166 191 ------TKDLSLYT-RQADLIIVAAGCVNLLRSDMV---KEGVIVVDVG-INRLESGKIVGDVDFEEVSKKSSYITPVPG 259 (282)
T ss_pred ------CCCHHHHH-hhCCEEEEcCCCcCccCHHHc---CCCCEEEEec-ccccCCCCeeCCCCHHHHHhhccEecCCCC
Confidence 23334333 245555577775 4777766 9999999998 6662 4446665332 11234666
Q ss_pred CCc
Q 006623 576 SLS 578 (638)
Q Consensus 576 ~~~ 578 (638)
.+.
T Consensus 260 GVG 262 (282)
T PRK14166 260 GVG 262 (282)
T ss_pred Cch
Confidence 544
No 140
>PRK05875 short chain dehydrogenase; Provisional
Probab=93.35 E-value=0.14 Score=52.19 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=36.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.++
T Consensus 6 ~~k~vlItGasg--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (276)
T PRK05875 6 QDRTYLVTGGGS--GIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEE 50 (276)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence 357899999998 9999999999999999998 777776665554
No 141
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=93.31 E-value=0.12 Score=54.57 Aligned_cols=43 Identities=19% Similarity=0.200 Sum_probs=37.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 6 ~k~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l 50 (322)
T PRK07453 6 KGTVIITGASS--GVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL 50 (322)
T ss_pred CCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 45799999998 9999999999999999988 8888887776665
No 142
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.31 E-value=0.19 Score=53.37 Aligned_cols=152 Identities=21% Similarity=0.226 Sum_probs=95.6
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006623 392 REAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (638)
.++-+.-+....+.|++.|++.. -|. +++..+++|.|- ++.++.= |++++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl 121 (285)
T PRK14191 42 DPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGF 121 (285)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccccccc
Confidence 33445556677778899998764 444 333347788763 2555422 332431 224554
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006623 449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (638)
Q Consensus 449 s----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (638)
| -|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++
T Consensus 122 ~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~--~VG~Pla~lL~~~gAtVtv~hs~--------- 190 (285)
T PRK14191 122 HPLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASN--IVGKPLAMLMLNAGASVSVCHIL--------- 190 (285)
T ss_pred ChhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCEEEEEeCC---------
Confidence 3 4666666544 44678999999997 9999999999999999999 221
Q ss_pred CCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006623 507 IPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 564 (638)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 564 (638)
..+|.+.+ -+|+.+|.++|+ .++++.. ++|+++||+. +++. ++--|+-
T Consensus 191 -----t~~l~~~~-~~ADIvV~AvG~p~~i~~~~v---k~GavVIDvG-i~~~~~gklvGDvd 243 (285)
T PRK14191 191 -----TKDLSFYT-QNADIVCVGVGKPDLIKASMV---KKGAVVVDIG-INRLNDGRLVGDVD 243 (285)
T ss_pred -----cHHHHHHH-HhCCEEEEecCCCCcCCHHHc---CCCcEEEEee-cccccCCceecccc
Confidence 12222222 134445567775 4677666 9999999998 6552 3445554
No 143
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=93.31 E-value=0.2 Score=53.69 Aligned_cols=153 Identities=16% Similarity=0.156 Sum_probs=102.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEee----cCcCChhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV----GDDLTGKE 538 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v----g~~~~~~~ 538 (638)
-+.++++|-. +||.-||.+|--.|-+|.+..-|..-.||.....=.-..|.++ .++++|+ +- -|+|+.+.
T Consensus 214 GKv~Vv~GYG---dVGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea--~~e~dif-VTtTGc~dii~~~H 287 (434)
T KOG1370|consen 214 GKVAVVCGYG---DVGKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEA--IREVDIF-VTTTGCKDIITGEH 287 (434)
T ss_pred ccEEEEeccC---ccchhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHh--hhcCCEE-EEccCCcchhhHHH
Confidence 4556666655 9999999999999999999777777778765432111111222 2444453 32 26788899
Q ss_pred hhcCCCCceeecccccCCc----CCCCC-------------ceeecCCcccc--CCCCccccccccccCcchhHHHHHhh
Q 006623 539 QARAPKGTIFIPYTQIPPR----KLRKD-------------CFYHSTPAMII--PPSLSNMHSCENWLGRRVMSAWRIAG 599 (638)
Q Consensus 539 q~~a~~G~~f~~~~~~~~~----~~R~d-------------c~y~~~~a~~~--P~~~~~~~~~e~~~p~~~~~Ac~a~~ 599 (638)
..+||.++++|-.-.|+-+ -+|.+ ...+++-.+.+ -+-+-|+. |-.+.|.=+||-.+.--
T Consensus 288 ~~~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL~-CatghpSFvmS~sftnQ 366 (434)
T KOG1370|consen 288 FDQMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNLG-CATGHPSFVMSNSFTNQ 366 (434)
T ss_pred HHhCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeecc-cccCCCceEEecchHHH
Confidence 9999999999988775544 22211 11222222221 22477787 99999999999999999
Q ss_pred hhhhhcCCCCCc----cch-h-hhhHHHH
Q 006623 600 IIHALEGWDLNE----CGQ-T-MCDIHQV 622 (638)
Q Consensus 600 ~v~alEgw~~~e----~G~-i-v~~i~~i 622 (638)
++.-+|=|++.+ .|- + ..++|+-
T Consensus 367 vlAqIeLwt~p~~kY~~~V~~LPKklDE~ 395 (434)
T KOG1370|consen 367 VLAQIELWTAPEGKYKVGVYVLPKKLDEY 395 (434)
T ss_pred HHHHHHHhcCCCCccccceEecchhhHHH
Confidence 999999999885 333 2 3777764
No 144
>PRK07074 short chain dehydrogenase; Provisional
Probab=93.31 E-value=0.13 Score=51.82 Aligned_cols=42 Identities=17% Similarity=0.220 Sum_probs=36.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 3 k~ilItGat~--~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~ 46 (257)
T PRK07074 3 RTALVTGAAG--GIGQALARRFLAAGDRVLALDIDAAALAAFADAL 46 (257)
T ss_pred CEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 5799999998 9999999999999999988 8888877776654
No 145
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.30 E-value=0.19 Score=53.33 Aligned_cols=153 Identities=19% Similarity=0.189 Sum_probs=96.7
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce----------------
Q 006623 392 REAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI---------------- 442 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i---------------- 442 (638)
..+-+.-+..-++.|++.|++.--. . +++..+++|.|- ++.+..= |++++.
T Consensus 42 d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl 121 (282)
T PRK14180 42 DPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGF 121 (282)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCcccccccc
Confidence 3344555666677789999876543 3 233346778774 2554421 222331
Q ss_pred ------eeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHh
Q 006623 443 ------KVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKL 505 (638)
Q Consensus 443 ------rvv~Gn-----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~ 505 (638)
|+..|+ .-|+..|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++
T Consensus 122 ~~~n~g~l~~g~~~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~ATVt~chs~-------- 191 (282)
T PRK14180 122 HPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRF-------- 191 (282)
T ss_pred ChhhHHHHhcCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEEcCC--------
Confidence 223342 34666665543 44688999999998 9999999999999999999 211
Q ss_pred hCCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc--CCCCCcee
Q 006623 506 RIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY 565 (638)
Q Consensus 506 ~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y 565 (638)
..+|.+.+ -+|+.+|.++|+ .++++.. ++|+++||+. ++.. ++.-|+-+
T Consensus 192 ------T~dl~~~~-k~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~~~gkl~GDvd~ 244 (282)
T PRK14180 192 ------TTDLKSHT-TKADILIVAVGKPNFITADMV---KEGAVVIDVG-INHVDGKIVGDVDF 244 (282)
T ss_pred ------CCCHHHHh-hhcCEEEEccCCcCcCCHHHc---CCCcEEEEec-ccccCCceeCCcCH
Confidence 12333333 244555567775 4777766 9999999998 6652 55566653
No 146
>PRK08177 short chain dehydrogenase; Provisional
Probab=93.29 E-value=0.11 Score=51.43 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=33.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
+.|+++|++| .||+++|+.|+++|.+|++ |+.++.++++
T Consensus 2 k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 42 (225)
T PRK08177 2 RTALIIGASR--GLGLGLVDRLLERGWQVTATVRGPQQDTALQ 42 (225)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHhCCCEEEEEeCCCcchHHHH
Confidence 5799999998 9999999999999999998 7766665553
No 147
>PRK08263 short chain dehydrogenase; Provisional
Probab=93.24 E-value=0.14 Score=52.50 Aligned_cols=42 Identities=12% Similarity=0.094 Sum_probs=36.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.++++++.
T Consensus 4 k~vlItGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 47 (275)
T PRK08263 4 KVWFITGASR--GFGRAWTEAALERGDRVVATARDTATLADLAEKY 47 (275)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc
Confidence 5799999998 9999999999999999988 8888887776654
No 148
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=93.22 E-value=0.16 Score=53.42 Aligned_cols=60 Identities=23% Similarity=0.200 Sum_probs=45.0
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCC
Q 006623 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~ 508 (638)
|||-....+.--..++. .++|++.||-| .|||++.+|.+.|++ +.+ |+.++-++|.+++.
T Consensus 105 TD~~Gf~~~L~~~~~~~-~~~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~ 167 (272)
T PRK12550 105 TDYIAIAKLLASYQVPP-DLVVALRGSGG---MAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG 167 (272)
T ss_pred cCHHHHHHHHHhcCCCC-CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC
Confidence 66666665543333433 35899999986 589999999999975 777 99999999987754
No 149
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=93.20 E-value=0.13 Score=54.33 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=42.1
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cch---hhHHHHHhhC
Q 006623 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLRI 507 (638)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~---~~~~~l~~~~ 507 (638)
|||.-...+.--.......+.|+++|| | -+|+|+|..|++.|.+ |.+ |+. ++.+++.+++
T Consensus 108 TD~~G~~~~l~~~~~~~~~k~vlI~GA-G--GagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l 173 (289)
T PRK12548 108 TDGLGFVRNLREHGVDVKGKKLTVIGA-G--GAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI 173 (289)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence 555555554432233334578999999 5 7899999999999987 877 765 6777776655
No 150
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=93.17 E-value=0.45 Score=53.31 Aligned_cols=141 Identities=13% Similarity=0.113 Sum_probs=84.6
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEE-Eeec--CcC
Q 006623 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTI-WLVG--DDL 534 (638)
Q Consensus 460 p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~-w~vg--~~~ 534 (638)
....++|+|+|. | .||+.+|+.|...|.+|++ ++..+....... +.+. .++.+.. +.+|++ =..| +.+
T Consensus 209 ~l~Gk~VlViG~-G--~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~-G~~v-~~l~eal--~~aDVVI~aTG~~~vI 281 (425)
T PRK05476 209 LIAGKVVVVAGY-G--DVGKGCAQRLRGLGARVIVTEVDPICALQAAMD-GFRV-MTMEEAA--ELGDIFVTATGNKDVI 281 (425)
T ss_pred CCCCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc-CCEe-cCHHHHH--hCCCEEEECCCCHHHH
Confidence 335678999997 5 9999999999999999999 455443222221 2111 1222222 223343 2334 246
Q ss_pred ChhhhhcCCCCceeecccccCCc--------------CCCCCceeecCCc---cc--cCCCCccccccccccCcchhHHH
Q 006623 535 TGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---MI--IPPSLSNMHSCENWLGRRVMSAW 595 (638)
Q Consensus 535 ~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~~--~P~~~~~~~~~e~~~p~~~~~Ac 595 (638)
+.+....+++|++++-+..++.+ +.|+.+.-.+.|. +. --+.+-|+- |..+.|..+|.-.
T Consensus 282 ~~~~~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl~-~~~ghp~~vmd~s 360 (425)
T PRK05476 282 TAEHMEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNLG-AATGHPSEVMDMS 360 (425)
T ss_pred HHHHHhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCcccccC-CCCCCcceeeCHH
Confidence 77888899999999998876542 2233333111211 11 112356676 8999999999776
Q ss_pred HHhhhhhhhcCCC
Q 006623 596 RIAGIIHALEGWD 608 (638)
Q Consensus 596 ~a~~~v~alEgw~ 608 (638)
+|.=.+-+++=|.
T Consensus 361 fa~q~l~~~~l~~ 373 (425)
T PRK05476 361 FANQALAQIELFT 373 (425)
T ss_pred HHHHHHHHHHHHh
Confidence 6655555555443
No 151
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.16 E-value=0.17 Score=50.56 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=32.4
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhh
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLR 506 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~--~~~~~l~~~ 506 (638)
|+|+|||| ++|+.|+++|.+++.+|.. |+. ++.++|+..
T Consensus 1 I~V~GatG--~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~ 43 (233)
T PF05368_consen 1 ILVTGATG--NQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL 43 (233)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT
T ss_pred CEEECCcc--HHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc
Confidence 78999999 9999999999999999888 653 456666654
No 152
>PRK07340 ornithine cyclodeaminase; Validated
Probab=93.16 E-value=0.84 Score=48.70 Aligned_cols=97 Identities=14% Similarity=0.130 Sum_probs=68.3
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006623 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (638)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig~ 479 (638)
.|+|+++.--=|..+.|..-.++.+--+|+ +.-.-+.||+.+|+ |++.+-+ +++.++|.++|+- ..|+
T Consensus 62 ~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGaG---~qa~ 138 (304)
T PRK07340 62 AITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGTG---VQAR 138 (304)
T ss_pred cEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHHH
Confidence 588887743333333343334466666655 45599999999985 3444555 5688899999995 8999
Q ss_pred HHHHHHhc-cC-cEEEe--cchhhHHHHHhhCC
Q 006623 480 AVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 480 ava~~L~~-~~-~~v~~--~~~~~~~~l~~~~~ 508 (638)
+.+++||. ++ .+|.+ |+.++-+++.+++.
T Consensus 139 ~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~ 171 (304)
T PRK07340 139 AHLEAFAAGLPVRRVWVRGRTAASAAAFCAHAR 171 (304)
T ss_pred HHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 99999983 55 45666 88899888887764
No 153
>PRK12939 short chain dehydrogenase; Provisional
Probab=93.14 E-value=0.15 Score=50.67 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=36.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 7 ~~~vlItGa~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (250)
T PRK12939 7 GKRALVTGAAR--GLGAAFAEALAEAGATVAFNDGLAAEARELAAAL 51 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 47899999998 9999999999999999888 7777776665543
No 154
>PRK06172 short chain dehydrogenase; Provisional
Probab=93.13 E-value=0.12 Score=51.83 Aligned_cols=43 Identities=21% Similarity=0.170 Sum_probs=36.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 7 ~k~ilItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (253)
T PRK06172 7 GKVALVTGGAA--GIGRATALAFAREGAKVVVADRDAAGGEETVALI 51 (253)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8777776665543
No 155
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=93.12 E-value=0.16 Score=51.68 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=39.3
Q ss_pred cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 458 ~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
..+...+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++
T Consensus 5 ~~~~~~k~~lItGa~~--~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~ 54 (265)
T PRK07097 5 LFSLKGKIALITGASY--GIGFAIAKAYAKAGATIVFNDINQELVDKGLAAY 54 (265)
T ss_pred ccCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 3344567899999998 9999999999999999988 7777777665553
No 156
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=93.11 E-value=0.13 Score=51.84 Aligned_cols=42 Identities=17% Similarity=0.244 Sum_probs=35.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 3 k~ilItG~~~--~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 46 (259)
T PRK12384 3 QVAVVIGGGQ--TLGAFLCHGLAEEGYRVAVADINSEKAANVAQEI 46 (259)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 7777776665543
No 157
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.09 E-value=0.2 Score=53.41 Aligned_cols=145 Identities=24% Similarity=0.235 Sum_probs=93.6
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCC
Q 006623 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGS 448 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gn 448 (638)
..+-+.-+..-++.|++.|+++.- |- +++..++||.|. ++.++.= |++++ .+=|||=
T Consensus 40 d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl 119 (287)
T PRK14173 40 DPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGF 119 (287)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccc
Confidence 334455566777889999988754 33 233346788774 3555522 33233 1224554
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhC
Q 006623 449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRI 507 (638)
Q Consensus 449 s----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~ 507 (638)
+ -|+..|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++-+
T Consensus 120 ~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVtich----------- 186 (287)
T PRK14173 120 HPLNVGRLWMGGEALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSN--IVGKPLAALLLREDATVTLAH----------- 186 (287)
T ss_pred ChhhhHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEeC-----------
Confidence 3 3566666544 33578999999998 999999999999999999811
Q ss_pred CcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 508 PVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
+...+|.+.+ -+|+.+|.++|+ -++++.. ++|+++||+. +++
T Consensus 187 --s~T~~l~~~~-~~ADIvIsAvGkp~~i~~~~v---k~GavVIDVG-in~ 230 (287)
T PRK14173 187 --SKTQDLPAVT-RRADVLVVAVGRPHLITPEMV---RPGAVVVDVG-INR 230 (287)
T ss_pred --CCCCCHHHHH-hhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-Ccc
Confidence 1122333333 245555567775 4677666 9999999998 554
No 158
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=93.09 E-value=0.15 Score=50.48 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=36.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|..|.+ |+.++.+++.+++
T Consensus 6 ~~~vlItGa~g--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (245)
T PRK12936 6 GRKALVTGASG--GIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL 50 (245)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 46899999998 9999999999999999887 6777777665543
No 159
>PRK07035 short chain dehydrogenase; Provisional
Probab=93.05 E-value=0.15 Score=51.21 Aligned_cols=43 Identities=23% Similarity=0.247 Sum_probs=37.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 8 ~k~vlItGas~--gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 52 (252)
T PRK07035 8 GKIALVTGASR--GIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAI 52 (252)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 7777777766654
No 160
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.05 E-value=0.2 Score=53.27 Aligned_cols=152 Identities=24% Similarity=0.234 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCC
Q 006623 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGS 448 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gn 448 (638)
.++-+.-+..-.+.|++.|+++.- |. +++..+++|.|. ++.++.= |++++ .+=|||=
T Consensus 41 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl 120 (282)
T PRK14169 41 DPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGF 120 (282)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccC
Confidence 334455566677788999987654 43 333346788864 3555521 33232 1224554
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006623 449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (638)
Q Consensus 449 s----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (638)
+ -|+..|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ .++
T Consensus 121 ~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVtichs~--------- 189 (282)
T PRK14169 121 SPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSN--IVGRPLAGLMVNHDATVTIAHSK--------- 189 (282)
T ss_pred ChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEECCC---------
Confidence 3 3666666544 44678999999998 9999999999999999999 211
Q ss_pred CCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006623 507 IPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 564 (638)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 564 (638)
..+|.+.+ -+|+.+|.++|+ .++++.. ++|+++||+. +.+. ++.-||-
T Consensus 190 -----T~~l~~~~-~~ADIvI~AvG~p~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd 242 (282)
T PRK14169 190 -----TRNLKQLT-KEADILVVAVGVPHFIGADAV---KPGAVVIDVG-ISRGADGKLLGDVD 242 (282)
T ss_pred -----CCCHHHHH-hhCCEEEEccCCcCccCHHHc---CCCcEEEEee-ccccCCCCeeecCc
Confidence 22333333 244445567775 4777766 9999999998 6652 4445655
No 161
>PRK07774 short chain dehydrogenase; Provisional
Probab=93.04 E-value=0.16 Score=50.72 Aligned_cols=43 Identities=21% Similarity=0.338 Sum_probs=35.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+++..+++++++
T Consensus 6 ~k~vlItGasg--~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 50 (250)
T PRK07774 6 DKVAIVTGAAG--GIGQAYAEALAREGASVVVADINAEGAERVAKQI 50 (250)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 7666666665543
No 162
>PRK07832 short chain dehydrogenase; Provisional
Probab=93.03 E-value=0.15 Score=52.25 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=34.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.++++|++| -||+++|+.|+++|.+|.+ |+.+..+++.++
T Consensus 1 k~vlItGas~--giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~ 43 (272)
T PRK07832 1 KRCFVTGAAS--GIGRATALRLAAQGAELFLTDRDADGLAQTVAD 43 (272)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 3689999998 9999999999999999888 777777666544
No 163
>PRK07677 short chain dehydrogenase; Provisional
Probab=93.02 E-value=0.13 Score=51.81 Aligned_cols=42 Identities=26% Similarity=0.405 Sum_probs=36.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++
T Consensus 2 k~~lItG~s~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 45 (252)
T PRK07677 2 KVVIITGGSS--GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI 45 (252)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 8887777776554
No 164
>PRK05693 short chain dehydrogenase; Provisional
Probab=93.01 E-value=0.15 Score=52.23 Aligned_cols=40 Identities=25% Similarity=0.318 Sum_probs=35.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+.+++
T Consensus 2 k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 43 (274)
T PRK05693 2 PVVLITGCSS--GIGRALADAFKAAGYEVWATARKAEDVEALAA 43 (274)
T ss_pred CEEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4789999998 9999999999999999988 78777777654
No 165
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.01 E-value=0.13 Score=51.67 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=36.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 11 ~~k~vlItG~~g--~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l 56 (247)
T PRK08945 11 KDRIILVTGAGD--GIGREAALTYARHGATVILLGRTEEKLEAVYDEI 56 (247)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 7777766665543
No 166
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=92.98 E-value=0.15 Score=50.17 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=34.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.|+++|++| .||+.+|+.|.++|.+|.+ |++++.+.+..+
T Consensus 6 ~~ilItGasg--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~ 48 (246)
T PRK05653 6 KTALVTGASR--GIGRAIALRLAADGAKVVIYDSNEEAAEALAAE 48 (246)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Confidence 5799999998 9999999999999999888 777776655444
No 167
>PRK06914 short chain dehydrogenase; Provisional
Probab=92.97 E-value=0.16 Score=52.00 Aligned_cols=41 Identities=15% Similarity=0.145 Sum_probs=35.6
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.++++++
T Consensus 4 k~~lItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 46 (280)
T PRK06914 4 KIAIVTGASS--GFGLLTTLELAKKGYLVIATMRNPEKQENLLSQ 46 (280)
T ss_pred CEEEEECCCc--hHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHH
Confidence 5689999998 9999999999999999988 777777776554
No 168
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.96 E-value=0.23 Score=52.86 Aligned_cols=152 Identities=21% Similarity=0.221 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006623 392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (638)
..+-+.-+...++.|++.|+++.- |. +++.+++||.|- |+.++.= |++++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl 121 (284)
T PRK14170 42 NQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGF 121 (284)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccC
Confidence 345555677778899999998643 44 334447788874 3555521 222331 224443
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006623 449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (638)
Q Consensus 449 s----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (638)
| -|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++
T Consensus 122 ~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVtichs~--------- 190 (284)
T PRK14170 122 HPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSN--IVGKPVAQLLLNENATVTIAHSR--------- 190 (284)
T ss_pred ChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCC---------
Confidence 3 3666666544 34688999999998 9999999999999999998 221
Q ss_pred CCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006623 507 IPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 564 (638)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~ 564 (638)
..+|.+.+ -+|+.+|.++|+ .++++.. ++|+++||+. ++.. ++--|+-
T Consensus 191 -----T~~l~~~~-~~ADIvI~AvG~~~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDvd 243 (284)
T PRK14170 191 -----TKDLPQVA-KEADILVVATGLAKFVKKDYI---KPGAIVIDVG-MDRDENNKLCGDVD 243 (284)
T ss_pred -----CCCHHHHH-hhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-CcccCCCCeecccc
Confidence 22333333 134445567775 4777777 8999999998 6652 3445554
No 169
>PRK06953 short chain dehydrogenase; Provisional
Probab=92.95 E-value=0.14 Score=50.57 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=34.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.++++.
T Consensus 2 ~~vlvtG~sg--~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~ 43 (222)
T PRK06953 2 KTVLIVGASR--GIGREFVRQYRADGWRVIATARDAAALAALQA 43 (222)
T ss_pred ceEEEEcCCC--chhHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence 4689999998 9999999999999999988 77777766654
No 170
>PRK06823 ornithine cyclodeaminase; Validated
Probab=92.94 E-value=0.61 Score=50.20 Aligned_cols=138 Identities=17% Similarity=0.028 Sum_probs=83.6
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-Ccceeee-cCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006623 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVV-DGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (638)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv-~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig 478 (638)
.|+|+++.--=|....+-.-.++.+.-+|+ +.-+-+. ||+.+|+ |+..+-+ +++.+++.++|+- ..|
T Consensus 64 ~g~K~v~~~p~N~~~glP~~~g~v~l~d~~TG~p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~G---~qA 140 (315)
T PRK06823 64 FVVKVSTGFYDNPAQGLPSNQGLMLAFSAKTGEPQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGTG---IQA 140 (315)
T ss_pred EEEEEEeecCCCccCCCCCeeEEEEEEECCCCceEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECCc---HHH
Confidence 577777643333322332223355555655 3446675 9999974 3334444 6788999999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcchhchhhhccc----cccceEE----EeecCcCChhhhhcCCCCc
Q 006623 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS----YAAHKTI----WLVGDDLTGKEQARAPKGT 546 (638)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~----~~~~~i~----w~vg~~~~~~~q~~a~~G~ 546 (638)
+.-++++| +.-.+|.+ |+.++-+++.+++... ..+..-+.+ .+.+||| ..-.-.++.+ +.+||+
T Consensus 141 ~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIV~taT~s~~P~~~~~---~l~~G~ 216 (315)
T PRK06823 141 RMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL-GFAVNTTLDAAEVAHAANLIVTTTPSREPLLQAE---DIQPGT 216 (315)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc-CCcEEEECCHHHHhcCCCEEEEecCCCCceeCHH---HcCCCc
Confidence 99999999 66667777 9999988887765421 222111222 2444555 1111223344 448999
Q ss_pred eeecccc
Q 006623 547 IFIPYTQ 553 (638)
Q Consensus 547 ~f~~~~~ 553 (638)
++..+.-
T Consensus 217 hi~~iGs 223 (315)
T PRK06823 217 HITAVGA 223 (315)
T ss_pred EEEecCC
Confidence 9988863
No 171
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=92.94 E-value=0.15 Score=51.14 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=36.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 ~~~vlItGasg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (262)
T PRK13394 7 GKTAVVTGAAS--GIGKEIALELARAGAAVAIADLNQDGANAVADEI 51 (262)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Confidence 46899999998 9999999999999999988 7777776665553
No 172
>PRK08589 short chain dehydrogenase; Validated
Probab=92.93 E-value=0.13 Score=52.68 Aligned_cols=42 Identities=24% Similarity=0.289 Sum_probs=35.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+ ++.+++.+++
T Consensus 6 ~k~vlItGas~--gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~ 49 (272)
T PRK08589 6 NKVAVITGAST--GIGQASAIALAQEGAYVLAVDIA-EAVSETVDKI 49 (272)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHH
Confidence 46799999997 9999999999999999998 66 6666665554
No 173
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=92.88 E-value=0.14 Score=51.10 Aligned_cols=41 Identities=20% Similarity=0.111 Sum_probs=33.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (638)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.++
T Consensus 3 k~ilItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~ 46 (248)
T PRK06947 3 KVVLITGASR--GIGRATAVLAAARGWSVGINYARDAAAAEETADA 46 (248)
T ss_pred cEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence 5799999998 9999999999999999876 555666555444
No 174
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=92.87 E-value=0.18 Score=51.05 Aligned_cols=43 Identities=12% Similarity=0.194 Sum_probs=34.8
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
...+.|+++|++| -||+++|+.|+++|.+|.+ |+ ++.++++++
T Consensus 13 l~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~ 57 (258)
T PRK06935 13 LDGKVAIVTGGNT--GLGQGYAVALAKAGADIIITTHG-TNWDETRRL 57 (258)
T ss_pred CCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHH
Confidence 3457899999998 9999999999999999988 55 455555444
No 175
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=92.77 E-value=0.16 Score=51.87 Aligned_cols=43 Identities=23% Similarity=0.266 Sum_probs=37.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 10 ~k~vlVtGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 54 (278)
T PRK08277 10 GKVAVITGGGG--VLGGAMAKELARAGAKVAILDRNQEKAEAVVAEI 54 (278)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 7777777776654
No 176
>PRK07060 short chain dehydrogenase; Provisional
Probab=92.75 E-value=0.21 Score=49.62 Aligned_cols=44 Identities=23% Similarity=0.316 Sum_probs=37.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
..+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.++.
T Consensus 8 ~~~~~lItGa~g--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 53 (245)
T PRK07060 8 SGKSVLVTGASS--GIGRACAVALAQRGARVVAAARNAAALDRLAGET 53 (245)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 456899999998 9999999999999999988 7777777776553
No 177
>PRK06125 short chain dehydrogenase; Provisional
Probab=92.72 E-value=0.15 Score=51.53 Aligned_cols=44 Identities=20% Similarity=0.271 Sum_probs=37.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 7 ~k~vlItG~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 52 (259)
T PRK06125 7 GKRVLITGASK--GIGAAAAEAFAAEGCHLHLVARDADALEALAADLR 52 (259)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 47899999997 9999999999999999988 88888877666543
No 178
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=92.70 E-value=0.17 Score=52.69 Aligned_cols=34 Identities=24% Similarity=0.204 Sum_probs=29.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (638)
++|+|+|++| -||+.+++.|.++|.+|.. |+.++
T Consensus 5 ~~ilVtGatG--fIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 5 KVVCVTGASG--YIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CEEEEECChH--HHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 6899999999 9999999999999999876 65543
No 179
>PRK05650 short chain dehydrogenase; Provisional
Probab=92.63 E-value=0.17 Score=51.54 Aligned_cols=40 Identities=18% Similarity=0.280 Sum_probs=34.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.++
T Consensus 2 ~vlVtGasg--gIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~ 43 (270)
T PRK05650 2 RVMITGAAS--GLGRAIALRWAREGWRLALADVNEEGGEETLKL 43 (270)
T ss_pred EEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 689999998 9999999999999999988 777777665444
No 180
>PRK07814 short chain dehydrogenase; Provisional
Probab=92.63 E-value=0.19 Score=51.08 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=37.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 9 ~~~~vlItGasg--gIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 54 (263)
T PRK07814 9 DDQVAVVTGAGR--GLGAAIALAFAEAGADVLIAARTESQLDEVAEQI 54 (263)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 7777777665553
No 181
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=92.61 E-value=0.2 Score=49.91 Aligned_cols=42 Identities=19% Similarity=0.302 Sum_probs=35.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
.+.++++|++| -||+++|+.|.++|.+|.+ |+.++.+++.++
T Consensus 3 ~~~ilItGas~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~ 46 (250)
T TIGR03206 3 DKTAIVTGGGG--GIGGATCRRFAEEGAKVAVFDLNREAAEKVAAD 46 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH
Confidence 46799999998 9999999999999999988 777776666554
No 182
>PRK09242 tropinone reductase; Provisional
Probab=92.61 E-value=0.18 Score=50.82 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=37.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.++++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 9 ~k~~lItGa~~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l 53 (257)
T PRK09242 9 GQTALITGASK--GIGLAIAREFLGLGADVLIVARDADALAQARDEL 53 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8888877776653
No 183
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.58 E-value=0.26 Score=52.30 Aligned_cols=151 Identities=21% Similarity=0.232 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh-
Q 006623 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS- 449 (638)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns- 449 (638)
+-+.-+..-.+.|++.|++..- |. +++.+++||.|. ++.++.= |++++. +=|||=+
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~ 124 (278)
T PRK14172 45 GSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTF 124 (278)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCH
Confidence 3344455556788888887753 32 344447788774 3555532 332331 2244432
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006623 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (638)
Q Consensus 450 ---------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (638)
-|++.|++=+ +-.-++|+++|... -||+-+|..|-++|..|++ .+
T Consensus 125 ~n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~AtVt~chs------------ 190 (278)
T PRK14172 125 ISVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSN--IVGKPVAQLLLNENATVTICHS------------ 190 (278)
T ss_pred hhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCC------------
Confidence 3566665533 44678999999997 9999999999999999999 22
Q ss_pred cchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc--CCCCCcee
Q 006623 509 VEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY 565 (638)
Q Consensus 509 ~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y 565 (638)
...+|.+.+ -+|+.++.++|+ .++++.. ++|+++||+- +++. ++--|+-+
T Consensus 191 --~T~~l~~~~-~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~~~gkl~GDvd~ 244 (278)
T PRK14172 191 --KTKNLKEVC-KKADILVVAIGRPKFIDEEYV---KEGAIVIDVG-TSSVNGKITGDVNF 244 (278)
T ss_pred --CCCCHHHHH-hhCCEEEEcCCCcCccCHHHc---CCCcEEEEee-ccccCCceeeeccH
Confidence 123444433 245555577775 5788777 9999999996 5553 45556653
No 184
>PLN00198 anthocyanidin reductase; Provisional
Probab=92.57 E-value=0.26 Score=52.16 Aligned_cols=41 Identities=20% Similarity=0.163 Sum_probs=33.6
Q ss_pred CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006623 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (638)
Q Consensus 459 ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~ 501 (638)
.|...++|+++|++| -||+.+|+.|.++|.+|.. |+.+...
T Consensus 5 ~~~~~~~vlItG~~G--fIG~~l~~~L~~~g~~V~~~~r~~~~~~ 47 (338)
T PLN00198 5 TPTGKKTACVIGGTG--FLASLLIKLLLQKGYAVNTTVRDPENQK 47 (338)
T ss_pred cCCCCCeEEEECCch--HHHHHHHHHHHHCCCEEEEEECCCCCHH
Confidence 366678899999999 9999999999999999854 6554443
No 185
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.55 E-value=0.31 Score=51.93 Aligned_cols=142 Identities=18% Similarity=0.192 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh--
Q 006623 395 INSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS-- 449 (638)
Q Consensus 395 in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns-- 449 (638)
-+.-+..-++.|++.|++.- -|. +++..++||.|- ++.++.= |++++. +=|||=+
T Consensus 52 S~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~ 131 (287)
T PRK14176 52 SKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPY 131 (287)
T ss_pred hHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChh
Confidence 34445566677888888653 443 344456777764 3555421 222331 1234433
Q ss_pred --------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcc
Q 006623 450 --------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVE 510 (638)
Q Consensus 450 --------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~ 510 (638)
-|++.|++-+ +-.-++|+++|... -||+-+|..|.++|-.|++-+ .
T Consensus 132 N~g~l~~g~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVtv~h-------------s 196 (287)
T PRK14176 132 NMGKLMIGDEGLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSN--VVGKPMAAMLLNRNATVSVCH-------------V 196 (287)
T ss_pred hhhhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCEEEEEe-------------c
Confidence 2666665544 34678999999997 899999999999999999911 1
Q ss_pred hhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 511 AQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 511 ~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
...+|.+.+ -+|+.+|.++|+ .++++. .++|+++||+. +..
T Consensus 197 ~T~~l~~~~-~~ADIvv~AvG~p~~i~~~~---vk~gavVIDvG-in~ 239 (287)
T PRK14176 197 FTDDLKKYT-LDADILVVATGVKHLIKADM---VKEGAVIFDVG-ITK 239 (287)
T ss_pred cCCCHHHHH-hhCCEEEEccCCccccCHHH---cCCCcEEEEec-ccc
Confidence 122333333 234444455665 456654 49999999998 554
No 186
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=92.55 E-value=0.18 Score=53.29 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=37.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++|+++ -||+++|+.|+++| .+|.+ |++++.+++++++.
T Consensus 3 ~k~vlITGas~--GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~ 49 (314)
T TIGR01289 3 KPTVIITGASS--GLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG 49 (314)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence 45789999997 99999999999999 99988 88888887776653
No 187
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.50 E-value=0.21 Score=49.70 Aligned_cols=43 Identities=19% Similarity=0.339 Sum_probs=36.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 7 ~~~vlVtG~sg--~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~ 51 (239)
T PRK07666 7 GKNALITGAGR--GIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV 51 (239)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 36799999998 9999999999999999988 7777766655443
No 188
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.49 E-value=0.19 Score=49.46 Aligned_cols=42 Identities=21% Similarity=0.251 Sum_probs=32.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (638)
.++|+++|++| .||+++|+.|+++|.+|++ ++.++.+.+.++
T Consensus 6 ~~~vlItGasg--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (249)
T PRK12825 6 GRVALVTGAAR--GLGRAIALRLARAGADVVVHYRSDEEAAEELVEA 50 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 35899999998 9999999999999999877 444445544433
No 189
>PRK07775 short chain dehydrogenase; Provisional
Probab=92.45 E-value=0.21 Score=51.35 Aligned_cols=43 Identities=23% Similarity=0.264 Sum_probs=35.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+++.++
T Consensus 9 ~~~~vlVtGa~g--~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 53 (274)
T PRK07775 9 DRRPALVAGASS--GIGAATAIELAAAGFPVALGARRVEKCEELVDK 53 (274)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 346899999998 9999999999999999877 777776665544
No 190
>PLN02427 UDP-apiose/xylose synthase
Probab=92.43 E-value=0.27 Score=53.28 Aligned_cols=42 Identities=17% Similarity=0.232 Sum_probs=33.0
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHH
Q 006623 460 PKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKL 503 (638)
Q Consensus 460 p~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l 503 (638)
|-+..+|+|+|+|| =||+.+++.|.++ |.+|.. |+.++.+.+
T Consensus 11 ~~~~~~VlVTGgtG--fIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l 55 (386)
T PLN02427 11 PIKPLTICMIGAGG--FIGSHLCEKLMTETPHKVLALDVYNDKIKHL 55 (386)
T ss_pred cccCcEEEEECCcc--hHHHHHHHHHHhcCCCEEEEEecCchhhhhh
Confidence 44566899999999 9999999999987 588886 555554443
No 191
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=92.43 E-value=0.18 Score=51.21 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=33.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l 503 (638)
.++|+++||+| .||+++++.|.++|.+|+. |+.++.+++
T Consensus 17 ~~~ilItGasG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~ 57 (251)
T PLN00141 17 TKTVFVAGATG--RTGKRIVEQLLAKGFAVKAGVRDVDKAKTS 57 (251)
T ss_pred CCeEEEECCCc--HHHHHHHHHHHhCCCEEEEEecCHHHHHHh
Confidence 56899999999 9999999999999999876 777765543
No 192
>PRK12746 short chain dehydrogenase; Provisional
Probab=92.40 E-value=0.2 Score=50.19 Aligned_cols=41 Identities=22% Similarity=0.210 Sum_probs=34.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (638)
+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.++
T Consensus 7 ~~ilItGasg--~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~ 50 (254)
T PRK12746 7 KVALVTGASR--GIGRAIAMRLANDGALVAIHYGRNKQAADETIRE 50 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 6899999998 9999999999999999965 666666655444
No 193
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.39 E-value=0.26 Score=52.38 Aligned_cols=142 Identities=18% Similarity=0.187 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ecc-------cccccccccCC---ceeeecC-CCCcce------------------
Q 006623 394 AINSLIEEAILEADAKGVKVIS--LGL-------LNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (638)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~--LG~-------ln~~e~ln~~g---~~~~~k~-p~~L~i------------------ 442 (638)
+-+.-++.-++.|++.|++..- |.. ++..++||.|- ++.++.= |++++.
T Consensus 46 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~ 125 (284)
T PRK14177 46 ASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTT 125 (284)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCCh
Confidence 3444455666788888887655 322 22336677654 2444421 222331
Q ss_pred ----eeecCC----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006623 443 ----KVVDGS----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (638)
Q Consensus 443 ----rvv~Gn----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (638)
|+..|+ .-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .+
T Consensus 126 ~n~g~l~~g~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVt~chs------------ 191 (284)
T PRK14177 126 LSFGKLSMGVETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSP--ILGKPMAMLLTEMNATVTLCHS------------ 191 (284)
T ss_pred hhHHHHHcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCC------------
Confidence 222332 23666666544 34678999999998 9999999999999999999 21
Q ss_pred cchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 509 VEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 509 ~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
...+|.+.+ -+|+.+|.++|+ .++++.. ++|+++||+. +..
T Consensus 192 --~T~~l~~~~-~~ADIvIsAvGk~~~i~~~~i---k~gavVIDvG-in~ 234 (284)
T PRK14177 192 --KTQNLPSIV-RQADIIVGAVGKPEFIKADWI---SEGAVLLDAG-YNP 234 (284)
T ss_pred --CCCCHHHHH-hhCCEEEEeCCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence 123333333 245555577775 4777777 9999999998 554
No 194
>PRK07589 ornithine cyclodeaminase; Validated
Probab=92.38 E-value=0.91 Score=49.58 Aligned_cols=139 Identities=14% Similarity=0.005 Sum_probs=86.2
Q ss_pred HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006623 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (638)
Q Consensus 408 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig 478 (638)
-.|+|+++.=-=|....+-.--++.+.-+++ +.-+-+.||+.+|+ |+..+-+ +++.+.+.++|+- ..|
T Consensus 65 ~~gvK~v~~~p~N~~~glP~i~g~v~L~D~~TG~p~Alldg~~lT~~RTaA~sala~~~Lar~da~~l~iiGaG---~QA 141 (346)
T PRK07589 65 LYSFKYVNGHPKNTRRGLQTVMAFGVLADVDTGYPLLLSEMTLLTALRTAATSALAAKYLARPDSRTMALIGNG---AQS 141 (346)
T ss_pred ceEEEEEeeCCCccccCCCceeEEEEEEECCCCCEEEEEcCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HHH
Confidence 3678877653334433343333445555554 45589999999984 3344555 6788899999987 889
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcchhchhhhccc----cccceEEEeec------CcCChhhhhcCCC
Q 006623 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS----YAAHKTIWLVG------DDLTGKEQARAPK 544 (638)
Q Consensus 479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~----~~~~~i~w~vg------~~~~~~~q~~a~~ 544 (638)
+.-++++| +.-.+|.+ |++++-+++.+++... ..+..-+.+ .+.++||--+- -.++. ++.++
T Consensus 142 ~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIIvtaT~S~~~~Pvl~~---~~lkp 217 (346)
T PRK07589 142 EFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP-GLRIVACRSVAEAVEGADIITTVTADKTNATILTD---DMVEP 217 (346)
T ss_pred HHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc-CCcEEEeCCHHHHHhcCCEEEEecCCCCCCceecH---HHcCC
Confidence 99998888 66666766 9999988888776532 111111122 23445541221 11333 35599
Q ss_pred Cceeecccc
Q 006623 545 GTIFIPYTQ 553 (638)
Q Consensus 545 G~~f~~~~~ 553 (638)
|+++..+--
T Consensus 218 G~hV~aIGs 226 (346)
T PRK07589 218 GMHINAVGG 226 (346)
T ss_pred CcEEEecCC
Confidence 999887643
No 195
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.37 E-value=0.22 Score=49.70 Aligned_cols=43 Identities=23% Similarity=0.343 Sum_probs=34.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~ 507 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ +++++.+++.++.
T Consensus 5 ~k~ilItGas~--gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~ 50 (253)
T PRK08642 5 EQTVLVTGGSR--GLGAAIARAFAREGARVVVNYHQSEDAAEALADEL 50 (253)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Confidence 36799999998 9999999999999999976 4555666665543
No 196
>PRK07904 short chain dehydrogenase; Provisional
Probab=92.36 E-value=0.17 Score=51.66 Aligned_cols=43 Identities=14% Similarity=0.237 Sum_probs=35.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhh-HHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDD-YEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~-~~~l~~~~ 507 (638)
.+.|+++|++| -||+++|+.|+++| .+|.+ |+.++ .+++.+++
T Consensus 8 ~~~vlItGas~--giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l 54 (253)
T PRK07904 8 PQTILLLGGTS--EIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQM 54 (253)
T ss_pred CcEEEEEcCCc--HHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHH
Confidence 34799999998 99999999999885 89888 77775 67665554
No 197
>PRK08264 short chain dehydrogenase; Validated
Probab=92.35 E-value=0.17 Score=50.23 Aligned_cols=37 Identities=22% Similarity=0.212 Sum_probs=31.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHH
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYE 501 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~ 501 (638)
.+.|+++|++| .||+++|+.|+++|. +|++ |+.++.+
T Consensus 6 ~~~vlItGgsg--~iG~~la~~l~~~G~~~V~~~~r~~~~~~ 45 (238)
T PRK08264 6 GKVVLVTGANR--GIGRAFVEQLLARGAAKVYAAARDPESVT 45 (238)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCcccEEEEecChhhhh
Confidence 46799999998 999999999999998 8888 6666554
No 198
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=92.33 E-value=0.28 Score=47.97 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=47.7
Q ss_pred HHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccce
Q 006623 451 AAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHK 525 (638)
Q Consensus 451 taavv~~~-----ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 525 (638)
|+..+++= ++-..++|+++|..+ -||+-++..|.++|..|++-+ .+..+|.+.+ -+||.
T Consensus 19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~--~VG~Pla~lL~~~~atVt~~h-------------~~T~~l~~~~-~~ADI 82 (160)
T PF02882_consen 19 TPLAIIELLEYYGIDLEGKKVVVVGRSN--IVGKPLAMLLLNKGATVTICH-------------SKTKNLQEIT-RRADI 82 (160)
T ss_dssp HHHHHHHHHHHTT-STTT-EEEEE-TTT--TTHHHHHHHHHHTT-EEEEE--------------TTSSSHHHHH-TTSSE
T ss_pred CHHHHHHHHHhcCCCCCCCEEEEECCcC--CCChHHHHHHHhCCCeEEecc-------------CCCCccccee-eeccE
Confidence 45555443 345678999999997 999999999999999999911 0112222222 13444
Q ss_pred EEEeecCc--CChhhhhcCCCCceeeccc
Q 006623 526 TIWLVGDD--LTGKEQARAPKGTIFIPYT 552 (638)
Q Consensus 526 i~w~vg~~--~~~~~q~~a~~G~~f~~~~ 552 (638)
||..+|+. ++++ +.++|+++||+.
T Consensus 83 VVsa~G~~~~i~~~---~ik~gavVIDvG 108 (160)
T PF02882_consen 83 VVSAVGKPNLIKAD---WIKPGAVVIDVG 108 (160)
T ss_dssp EEE-SSSTT-B-GG---GS-TTEEEEE--
T ss_pred Eeeeeccccccccc---cccCCcEEEecC
Confidence 55666642 4444 348899999887
No 199
>PRK07041 short chain dehydrogenase; Provisional
Probab=92.29 E-value=0.19 Score=49.61 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=33.1
Q ss_pred EEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 467 LLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+++|++| -||+++|+.|+++|.+|++ |+.++.+.+.+++
T Consensus 1 lItGas~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~ 41 (230)
T PRK07041 1 LVVGGSS--GIGLALARAFAAEGARVTIASRSRDRLAAAARAL 41 (230)
T ss_pred CeecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4789998 9999999999999999988 7777777665544
No 200
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=92.28 E-value=0.23 Score=48.98 Aligned_cols=30 Identities=23% Similarity=0.354 Sum_probs=27.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+++|++| .||+++|+.|+++|.+|.+
T Consensus 5 ~~~vlItG~sg--~iG~~l~~~l~~~G~~v~~ 34 (248)
T PRK05557 5 GKVALVTGASR--GIGRAIAERLAAQGANVVI 34 (248)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 46899999998 9999999999999999966
No 201
>PRK07806 short chain dehydrogenase; Provisional
Probab=92.16 E-value=0.27 Score=49.18 Aligned_cols=42 Identities=19% Similarity=0.198 Sum_probs=33.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~ 506 (638)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+. ++.+++.++
T Consensus 6 ~k~vlItGasg--giG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (248)
T PRK07806 6 GKTALVTGSSR--GIGADTAKILAGAGAHVVVNYRQKAPRANKVVAE 50 (248)
T ss_pred CcEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHH
Confidence 36799999998 9999999999999999977 554 345544433
No 202
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.14 E-value=0.29 Score=52.35 Aligned_cols=144 Identities=18% Similarity=0.167 Sum_probs=92.6
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCC
Q 006623 392 REAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGS 448 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gn 448 (638)
..+-+.-+...++.|++.|++.. -|- +++..+++|.|- |+.++.= |++++ .+=|||=
T Consensus 43 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl 122 (297)
T PRK14186 43 DPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGL 122 (297)
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 33455556777788999998875 443 223336677754 3555522 23233 1224553
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006623 449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (638)
Q Consensus 449 s----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (638)
| -|+..|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++
T Consensus 123 ~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGkPla~lL~~~~atVtv~hs~--------- 191 (297)
T PRK14186 123 HPLNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSI--LVGKPLALMLLAANATVTIAHSR--------- 191 (297)
T ss_pred ChhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCC---------
Confidence 3 3566665544 34578999999998 9999999999999999999 221
Q ss_pred CCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 507 IPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
..+|.+.+ -+|+.+|.++|+ .++++.. ++|+++||+. +..
T Consensus 192 -----T~~l~~~~-~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~ 233 (297)
T PRK14186 192 -----TQDLASIT-READILVAAAGRPNLIGAEMV---KPGAVVVDVG-IHR 233 (297)
T ss_pred -----CCCHHHHH-hhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 22333333 245555567775 4677666 9999999998 554
No 203
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.11 E-value=0.35 Score=51.39 Aligned_cols=165 Identities=21% Similarity=0.217 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 006623 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS 449 (638)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns 449 (638)
.+-+.-+...++.|++.|+... -|. +++.+++||.|- ++.++.= |++++. +=|||=+
T Consensus 43 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~ 122 (281)
T PRK14183 43 PASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFH 122 (281)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccC
Confidence 3445556667778899998754 342 333346788773 3555522 332331 2244443
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006623 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (638)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~ 507 (638)
-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++
T Consensus 123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--~VG~Pla~lL~~~~AtVti~hs~---------- 190 (281)
T PRK14183 123 PYNVGRLVTGLDGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASN--IVGKPMAALLLNANATVDICHIF---------- 190 (281)
T ss_pred hhhhhHHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCC----------
Confidence 3666666544 44688999999997 9999999999999999999 211
Q ss_pred CcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc---CCCCCceeecC-----CccccCCCC
Q 006623 508 PVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHST-----PAMIIPPSL 577 (638)
Q Consensus 508 ~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~~-----~a~~~P~~~ 577 (638)
..+|.+.+ -+|+.+|.++|+ -++++.. ++|+++||+. +.+. ++--|+-+.+- ....||+.+
T Consensus 191 ----T~~l~~~~-~~ADIvV~AvGkp~~i~~~~v---k~gavvIDvG-in~~~~gkl~GDVd~~~~~~~a~~iTPVPGGV 261 (281)
T PRK14183 191 ----TKDLKAHT-KKADIVIVGVGKPNLITEDMV---KEGAIVIDIG-INRTEDGRLVGDVDFENVAKKCSYITPVPGGV 261 (281)
T ss_pred ----CcCHHHHH-hhCCEEEEecCcccccCHHHc---CCCcEEEEee-ccccCCCCeECCccHHHHHhhceEecCCCCCC
Confidence 12233222 144445567775 4677766 9999999998 6652 44455553321 124466655
Q ss_pred c
Q 006623 578 S 578 (638)
Q Consensus 578 ~ 578 (638)
.
T Consensus 262 G 262 (281)
T PRK14183 262 G 262 (281)
T ss_pred h
Confidence 4
No 204
>PRK06181 short chain dehydrogenase; Provisional
Probab=92.10 E-value=0.19 Score=50.78 Aligned_cols=41 Identities=17% Similarity=0.271 Sum_probs=34.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.|+|+|++| .||+++|+.|+++|.+|++ |+.++.+++.++
T Consensus 2 ~~vlVtGasg--~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~ 44 (263)
T PRK06181 2 KVVIITGASE--GIGRALAVRLARAGAQLVLAARNETRLASLAQE 44 (263)
T ss_pred CEEEEecCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4689999998 9999999999999999998 776666655544
No 205
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.09 E-value=0.34 Score=51.58 Aligned_cols=150 Identities=21% Similarity=0.208 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC--
Q 006623 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS-- 448 (638)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn-- 448 (638)
+-+.-++.-++.|++.|++..- |. +++.+++||.|- ++.++.= |++++. +=|||=
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~ 123 (286)
T PRK14184 44 ASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHP 123 (286)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCH
Confidence 4445566777889999988754 33 333446788864 3555422 333441 113332
Q ss_pred --------------hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEe-cchhhHHHHH
Q 006623 449 --------------SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT-ICKDDYEKLK 504 (638)
Q Consensus 449 --------------sltaavv~~~-----ip~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~~-~~~~~~~~l~ 504 (638)
.-|++.|++= |+-.-++|+++|... -||+-+|..|.+ +|-.|++ .++
T Consensus 124 ~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~AtVt~~hs~------- 194 (286)
T PRK14184 124 ENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSN--IVGKPLALMLGAPGKFANATVTVCHSR------- 194 (286)
T ss_pred hhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhCCcccCCCEEEEEeCC-------
Confidence 2466666653 444678999999998 999999999998 8888888 221
Q ss_pred hhCCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCCc--CCCCCce
Q 006623 505 LRIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF 564 (638)
Q Consensus 505 ~~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~ 564 (638)
..+|.+.+ -+|+.+|..+|+ .++++.. ++|+++||+. +++. ++--|+-
T Consensus 195 -------t~~l~~~~-~~ADIVI~AvG~p~li~~~~v---k~GavVIDVG-i~~~~~~l~GDVd 246 (286)
T PRK14184 195 -------TPDLAEEC-READFLFVAIGRPRFVTADMV---KPGAVVVDVG-INRTDDGLVGDCD 246 (286)
T ss_pred -------chhHHHHH-HhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-eeccCCCccCCcc
Confidence 12333333 133444456664 4677666 9999999999 7763 4455554
No 206
>PRK06841 short chain dehydrogenase; Provisional
Probab=92.08 E-value=0.25 Score=49.57 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=30.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (638)
..+.|+++|++| .||+++|+.|+++|.+|.+ |+.+
T Consensus 14 ~~k~vlItGas~--~IG~~la~~l~~~G~~Vi~~~r~~~ 50 (255)
T PRK06841 14 SGKVAVVTGGAS--GIGHAIAELFAAKGARVALLDRSED 50 (255)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356899999998 9999999999999999998 6554
No 207
>PLN02494 adenosylhomocysteinase
Probab=92.04 E-value=1.1 Score=50.94 Aligned_cols=158 Identities=15% Similarity=0.091 Sum_probs=95.5
Q ss_pred eeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH-HHHHhhCCcchhchhh
Q 006623 442 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY-EKLKLRIPVEAQHNLV 516 (638)
Q Consensus 442 irvv~Gnsltaavv~~~ip--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~-~~l~~~~~~~~~~~l~ 516 (638)
-|.=||.|. .-.+++... ..-++|.|+|.- +||+.+|+.|...|.+|+. ++..+. +....... . .++.
T Consensus 232 n~yGtgqS~-~d~i~r~t~i~LaGKtVvViGyG---~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~--v-v~le 304 (477)
T PLN02494 232 NLYGCRHSL-PDGLMRATDVMIAGKVAVICGYG---DVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQ--V-LTLE 304 (477)
T ss_pred ccccccccH-HHHHHHhcCCccCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCe--e-ccHH
Confidence 455567775 333444433 256789999987 9999999999999999998 454442 22211121 1 1222
Q ss_pred hccccccceEE-EeecC--cCChhhhhcCCCCceeecccccCCc---------------CCCCCceeecCC----ccc--
Q 006623 517 LSTSYAAHKTI-WLVGD--DLTGKEQARAPKGTIFIPYTQIPPR---------------KLRKDCFYHSTP----AMI-- 572 (638)
Q Consensus 517 ~~~~~~~~~i~-w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---------------~~R~dc~y~~~~----a~~-- 572 (638)
++. +.++++ =..|. .+..+....+++|++++-++++..+ +.|..+..-+.+ .+.
T Consensus 305 Eal--~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~i~ll 382 (477)
T PLN02494 305 DVV--SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSGIIVL 382 (477)
T ss_pred HHH--hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCEEEEE
Confidence 221 223443 22332 3578899999999999999985422 222222222221 121
Q ss_pred cCCCCccccccccccCcchhHHHHHhhhhhhhcCCCC
Q 006623 573 IPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL 609 (638)
Q Consensus 573 ~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~ 609 (638)
--+.+-|+. |-.+.|..+|.-.++--.+-..|-|..
T Consensus 383 ~eGrlvNl~-~~~GhP~evmd~sFa~Q~la~~~l~~~ 418 (477)
T PLN02494 383 AEGRLMNLG-CATGHPSFVMSCSFTNQVIAQLELWNE 418 (477)
T ss_pred eCCcccccc-CCCCCCcceeeHHHHHHHHHHHHHHhc
Confidence 223477787 899999999999887766655555554
No 208
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=92.02 E-value=0.39 Score=54.99 Aligned_cols=179 Identities=15% Similarity=0.126 Sum_probs=102.0
Q ss_pred HHHcCCcEEEecccc------------cccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccC
Q 006623 406 ADAKGVKVISLGLLN------------QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 473 (638)
Q Consensus 406 A~k~G~kv~~LG~ln------------~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~~~~~V~~~Gatg 473 (638)
..++|+.++++=.+. ++-++.|+..+..+-| .|.-++ +|.+-++. .+| .++|+|.|+-
T Consensus 104 l~~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~--~lgr~~-~g~~taag----~vp--~akVlViGaG- 173 (511)
T TIGR00561 104 LAAKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAH--EFGRFF-TGQITAAG----KVP--PAKVLVIGAG- 173 (511)
T ss_pred HHHcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHH--Hhhhhc-CCceecCC----CCC--CCEEEEECCC-
Confidence 356778888766444 3345555554444433 033333 45544332 344 4899999985
Q ss_pred chhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcch-hchh------------------h----hcc-c-cccceE
Q 006623 474 ANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-QHNL------------------V----LST-S-YAAHKT 526 (638)
Q Consensus 474 ~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~-~~~l------------------~----~~~-~-~~~~~i 526 (638)
-+|.+.+..+...|.+|.. ++.++.+..++ ++.+. ..+. . +.. + ++..||
T Consensus 174 --~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DI 250 (511)
T TIGR00561 174 --VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDI 250 (511)
T ss_pred --HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCE
Confidence 8999999999999998887 77777776654 33222 0000 0 001 1 233455
Q ss_pred E-E---eecC----cCChhhhhcCCCCceeecccccCCc----CCCCCceeecCCccccCCCCccccccccccCcc---h
Q 006623 527 I-W---LVGD----DLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR---V 591 (638)
Q Consensus 527 ~-w---~vg~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~---~ 591 (638)
+ = +-|+ .+++++.+.+++|.+++|++ .++- -.|.|.+|.+. +.+. +.|--.+|.+ +
T Consensus 251 VI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA-~d~GGn~E~t~p~~~~~~~------~GV~--~~gv~nlPs~~p~~ 321 (511)
T TIGR00561 251 IITTALIPGKPAPKLITEEMVDSMKAGSVIVDLA-AEQGGNCEYTKPGEVYTTE------NQVK--VIGYTDLPSRLPTQ 321 (511)
T ss_pred EEECcccCCCCCCeeehHHHHhhCCCCCEEEEee-eCCCCCEEEecCceEEEec------CCEE--EEeeCCccccCHHH
Confidence 4 1 1133 38999999999999999999 6553 22333333221 1122 3355666665 3
Q ss_pred hHHHHHhhhhhhhcC
Q 006623 592 MSAWRIAGIIHALEG 606 (638)
Q Consensus 592 ~~Ac~a~~~v~alEg 606 (638)
.+--.+..++.-||.
T Consensus 322 AS~l~s~nl~~~l~~ 336 (511)
T TIGR00561 322 SSQLYGTNLVNLLKL 336 (511)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333455566555554
No 209
>PRK06484 short chain dehydrogenase; Validated
Probab=92.02 E-value=0.24 Score=55.67 Aligned_cols=45 Identities=18% Similarity=0.209 Sum_probs=39.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
..+.++++|+++ -||+++|+.|+++|.+|.+ |+++++++++++++
T Consensus 268 ~~k~~lItGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 314 (520)
T PRK06484 268 SPRVVAITGGAR--GIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG 314 (520)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 457899999998 9999999999999999998 88888888877653
No 210
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.00 E-value=0.23 Score=50.75 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=27.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~ 37 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGAELAF 37 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 35799999843247999999999999999988
No 211
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=91.94 E-value=0.26 Score=49.69 Aligned_cols=43 Identities=14% Similarity=0.226 Sum_probs=36.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
..+.|+++|++| -||+++|+.|+++|.++.+ |+.++.+++.++
T Consensus 10 ~~k~vlVtG~s~--gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~ 54 (255)
T PRK06113 10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDE 54 (255)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence 457899999998 9999999999999999988 777777666554
No 212
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=91.92 E-value=0.25 Score=49.40 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 4 ~~k~vlItGas~--gIG~~ia~~l~~~G~~vi~ 34 (248)
T TIGR01832 4 EGKVALVTGANT--GLGQGIAVGLAEAGADIVG 34 (248)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 346899999998 9999999999999999998
No 213
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=91.92 E-value=0.19 Score=52.56 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=27.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccC--cEEEe--cchh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKD 498 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~~--~~~~ 498 (638)
+|+|+|||| -||+.+++.|.++| .+|.. |+.+
T Consensus 1 ~vlvtGatG--~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATG--FLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccch--HHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 489999999 99999999999988 56666 6554
No 214
>PLN02583 cinnamoyl-CoA reductase
Probab=91.90 E-value=0.41 Score=50.10 Aligned_cols=31 Identities=16% Similarity=0.111 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
..+.|+|+|++| -||+++++.|.++|.+|..
T Consensus 5 ~~k~vlVTGatG--~IG~~lv~~Ll~~G~~V~~ 35 (297)
T PLN02583 5 SSKSVCVMDASG--YVGFWLVKRLLSRGYTVHA 35 (297)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 346899999999 9999999999999999987
No 215
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=91.90 E-value=0.33 Score=51.57 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=31.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~~--~~~~~~~~l~~~ 506 (638)
+.|+|+|++| -||+++|+.|+++| .+|.+ |+..+.++++++
T Consensus 5 k~vLVTGatG--~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~ 49 (324)
T TIGR03589 5 KSILITGGTG--SFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQK 49 (324)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHH
Confidence 5799999999 99999999999886 67776 555554445443
No 216
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=91.88 E-value=0.24 Score=52.89 Aligned_cols=47 Identities=13% Similarity=0.199 Sum_probs=38.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~ 508 (638)
..+.++++|+.+.+-||+|+|+.|++.|-+|.+ |+.++++++..++.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~ 55 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLR 55 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhhh
Confidence 456899999931148999999999999999999 88899988876654
No 217
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=91.85 E-value=0.21 Score=50.58 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=36.1
Q ss_pred EEEEecccCchhhHHHHHHHHhc----cCcEEEe--cchhhHHHHHhhCC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~----~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.|+++|+++ -||+++|+.|++ +|.+|.+ |++++.+++++++.
T Consensus 2 ~vlItGas~--GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~ 49 (256)
T TIGR01500 2 VCLVTGASR--GFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIG 49 (256)
T ss_pred EEEEecCCC--chHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHH
Confidence 588999997 999999999997 7999988 88888888776653
No 218
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=91.83 E-value=0.33 Score=51.96 Aligned_cols=143 Identities=17% Similarity=0.174 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006623 393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 442 (638)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 442 (638)
.+-+.-+...++.|++.|++. .-|. ++..+++||.|- |+.+..= |++++.
T Consensus 51 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~ 130 (299)
T PLN02516 51 KDSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFH 130 (299)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccC
Confidence 344555666777888888885 4443 223336677774 3554421 221221
Q ss_pred -----eeecC--C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHh
Q 006623 443 -----KVVDG--S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKL 505 (638)
Q Consensus 443 -----rvv~G--n----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~ 505 (638)
|+..| + .-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++
T Consensus 131 ~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~--iVGkPla~lL~~~~ATVtvchs~-------- 200 (299)
T PLN02516 131 PLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSN--IVGLPVSLLLLKADATVTVVHSR-------- 200 (299)
T ss_pred HhhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCC--------
Confidence 33333 1 34666666544 44688999999997 9999999999999999999 221
Q ss_pred hCCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 506 RIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 506 ~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
..+|.+.+ -+|+.+|..+|+ .++++.. ++|++++|+. +..
T Consensus 201 ------T~nl~~~~-~~ADIvv~AvGk~~~i~~~~v---k~gavVIDvG-in~ 242 (299)
T PLN02516 201 ------TPDPESIV-READIVIAAAGQAMMIKGDWI---KPGAAVIDVG-TNA 242 (299)
T ss_pred ------CCCHHHHH-hhCCEEEEcCCCcCccCHHHc---CCCCEEEEee-ccc
Confidence 23333333 244445567776 4566655 9999999998 554
No 219
>PRK07576 short chain dehydrogenase; Provisional
Probab=91.75 E-value=0.3 Score=49.91 Aligned_cols=43 Identities=14% Similarity=0.273 Sum_probs=36.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.++
T Consensus 8 ~~k~ilItGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 52 (264)
T PRK07576 8 AGKNVVVVGGTS--GINLGIAQAFARAGANVAVASRSQEKVDAAVAQ 52 (264)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 456899999998 9999999999999999988 777776665444
No 220
>PRK12743 oxidoreductase; Provisional
Probab=91.72 E-value=0.25 Score=50.00 Aligned_cols=41 Identities=12% Similarity=0.158 Sum_probs=33.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (638)
+.|+++|++| -||+++|+.|+++|.+|.+ +++++.+++.++
T Consensus 3 k~vlItGas~--giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~ 46 (256)
T PRK12743 3 QVAIVTASDS--GIGKACALLLAQQGFDIGITWHSDEEGAKETAEE 46 (256)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH
Confidence 5799999997 9999999999999999977 455666665554
No 221
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.69 E-value=0.27 Score=50.25 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=35.6
Q ss_pred CcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCC
Q 006623 463 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~~--~~---~~~~~~l~~~~~ 508 (638)
.+.++++|++ + -||+++|+.|+++|.+|.+ |+ +++++++++++.
T Consensus 7 ~k~~lItGa~~s~--GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~ 57 (257)
T PRK08594 7 GKTYVVMGVANKR--SIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE 57 (257)
T ss_pred CCEEEEECCCCCC--CHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC
Confidence 4678999997 4 7999999999999999998 33 456777777653
No 222
>PRK06179 short chain dehydrogenase; Provisional
Probab=91.65 E-value=0.21 Score=50.78 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=30.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (638)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++.
T Consensus 5 ~~vlVtGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~ 41 (270)
T PRK06179 5 KVALVTGASS--GIGRATAEKLARAGYRVFGTSRNPARA 41 (270)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCChhhc
Confidence 5799999998 9999999999999999998 665544
No 223
>PRK07069 short chain dehydrogenase; Validated
Probab=91.62 E-value=0.21 Score=49.74 Aligned_cols=40 Identities=20% Similarity=0.346 Sum_probs=33.8
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhC
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRI 507 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~-~~~~~~l~~~~ 507 (638)
|+++|++| -||+++|+.|+++|.+|.+ |+ .++.+.+++++
T Consensus 2 ilVtG~~~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 44 (251)
T PRK07069 2 AFITGAAG--GLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEI 44 (251)
T ss_pred EEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 79999998 9999999999999999988 65 66677666554
No 224
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=91.53 E-value=0.39 Score=50.48 Aligned_cols=44 Identities=20% Similarity=0.297 Sum_probs=38.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.-+.++++|++. -||+|+|+.|++.|-+|.+ |++|+.++.++++
T Consensus 7 ~gkvalVTG~s~--GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~ 52 (270)
T KOG0725|consen 7 AGKVALVTGGSS--GIGKAIALLLAKAGAKVVITGRSEERLEETAQEL 52 (270)
T ss_pred CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 346788999996 9999999999999999999 8888888777663
No 225
>PRK08628 short chain dehydrogenase; Provisional
Probab=91.47 E-value=0.27 Score=49.52 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=31.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (638)
..+.++++||+| -||+++|+.|+++|.+|.+ |+++..
T Consensus 6 ~~~~ilItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~ 44 (258)
T PRK08628 6 KDKVVIVTGGAS--GIGAAISLRLAEEGAIPVIFGRSAPDD 44 (258)
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHcCCcEEEEcCChhhH
Confidence 456899999998 9999999999999999988 666554
No 226
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.46 E-value=0.29 Score=49.37 Aligned_cols=41 Identities=22% Similarity=0.361 Sum_probs=33.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL 505 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~ 505 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..+++++
T Consensus 7 ~k~~lItGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~ 50 (255)
T PRK06463 7 GKVALITGGTR--GIGRAIAEAFLREGAKVAVLYNSAENEAKELRE 50 (255)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh
Confidence 46899999998 9999999999999999987 34444555543
No 227
>PRK08219 short chain dehydrogenase; Provisional
Probab=91.45 E-value=0.27 Score=48.19 Aligned_cols=40 Identities=15% Similarity=0.226 Sum_probs=33.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.|+|+|++| .||+++|+.|+++ .+|.. |+.++.++++++
T Consensus 4 ~~vlVtG~~g--~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~ 45 (227)
T PRK08219 4 PTALITGASR--GIGAAIARELAPT-HTLLLGGRPAERLDELAAE 45 (227)
T ss_pred CEEEEecCCc--HHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHH
Confidence 5799999998 9999999999988 88887 877777766544
No 228
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=91.33 E-value=0.24 Score=50.47 Aligned_cols=43 Identities=16% Similarity=0.296 Sum_probs=35.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~ 508 (638)
..|+++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++.
T Consensus 2 ~~~lITGas~--gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~ 47 (267)
T TIGR02685 2 PAAVVTGAAK--RIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELN 47 (267)
T ss_pred CEEEEeCCCC--cHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHH
Confidence 4689999997 9999999999999999988 34567776665543
No 229
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.32 E-value=0.29 Score=50.09 Aligned_cols=45 Identities=18% Similarity=0.295 Sum_probs=34.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-----~~~~~~~~l~~~~ 507 (638)
.+.|+++|+++.+-||+|+|+.|+++|.+|.+ |++++.+++.++.
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~ 55 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF 55 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc
Confidence 46799999742247999999999999999987 2345666665554
No 230
>PRK06199 ornithine cyclodeaminase; Validated
Probab=91.31 E-value=1.1 Score=49.43 Aligned_cols=153 Identities=12% Similarity=0.115 Sum_probs=94.9
Q ss_pred cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006623 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (638)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~kig~ 479 (638)
.|+|+++.=-=|....+..-.++.+--+|+ +.-.-+.||+.+|+ |+..+-+ +++.+.+.++|+- -.|+
T Consensus 92 ~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~G---~QA~ 168 (379)
T PRK06199 92 AGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGPG---VMGK 168 (379)
T ss_pred eEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECCc---HHHH
Confidence 577887754334433444445566666665 35589999999985 4445556 6788999999987 8999
Q ss_pred HHHHHHhc--c-CcEEEe--cchhhHHHHHhhCCcchhc--hhhhccc----cccceEEEee--c---------CcCChh
Q 006623 480 AVASSLCQ--M-GIKVAT--ICKDDYEKLKLRIPVEAQH--NLVLSTS----YAAHKTIWLV--G---------DDLTGK 537 (638)
Q Consensus 480 ava~~L~~--~-~~~v~~--~~~~~~~~l~~~~~~~~~~--~l~~~~~----~~~~~i~w~v--g---------~~~~~~ 537 (638)
.-++++|+ . -.+|.+ |+.++-+++.+++...... ...-+.+ .+.++|| +. . -.++.+
T Consensus 169 ~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIV-vtaT~s~~~~~s~~Pv~~~~ 247 (379)
T PRK06199 169 TILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIV-TYCNSGETGDPSTYPYVKRE 247 (379)
T ss_pred HHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEE-EEccCCCCCCCCcCcEecHH
Confidence 99999984 3 346666 9999998888776543211 1111222 3445665 32 1 123344
Q ss_pred hhhcCCCCceeecccc--cCCcCCCCC-ceeecC
Q 006623 538 EQARAPKGTIFIPYTQ--IPPRKLRKD-CFYHST 568 (638)
Q Consensus 538 ~q~~a~~G~~f~~~~~--~~~~~~R~d-c~y~~~ 568 (638)
+.++|+|+.-... +|+.-+++| ..|-+.
T Consensus 248 ---~lkpG~hv~~ig~~eld~~~l~~~a~vvvD~ 278 (379)
T PRK06199 248 ---WVKPGAFLLMPAACRIDEGMEQGDVRKVVDN 278 (379)
T ss_pred ---HcCCCcEEecCCcccCCHHHHhCCCcEEEcC
Confidence 4489999875432 555545553 444443
No 231
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=91.29 E-value=0.78 Score=49.84 Aligned_cols=156 Identities=15% Similarity=0.109 Sum_probs=94.9
Q ss_pred HcCCcEEEeccccc-ccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhh
Q 006623 408 AKGVKVISLGLLNQ-GEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 477 (638)
Q Consensus 408 k~G~kv~~LG~ln~-~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~~~Gatg~~ki 477 (638)
-.|+|+++ |-... ...|..-.++.+--.|+ +..+-+.||+.+|+ |++..-+ |++.+.+.++|+- ..
T Consensus 66 ~~gvK~v~-~~p~N~~~glp~v~g~~~L~d~~TG~plal~d~~~lTa~RTaAasavAa~~LA~~da~~laiIGaG---~q 141 (330)
T COG2423 66 VAGVKIVG-VHPDNPARGLPTVSGVIVLFDAETGEPLALLDATRLTALRTAAASAVAAKYLARKDASTLAIIGAG---AQ 141 (330)
T ss_pred eEEEEEec-CcCCccccCCCcceEEEEEEecCCCCEEEEecCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HH
Confidence 35667666 22222 13444444555555555 45599999999985 3445544 6689999999998 89
Q ss_pred HHHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcchhchhhhccc----cccceEE----EeecCcCChhhhhcCCCC
Q 006623 478 ANAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS----YAAHKTI----WLVGDDLTGKEQARAPKG 545 (638)
Q Consensus 478 g~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~----~~~~~i~----w~vg~~~~~~~q~~a~~G 545 (638)
|+.-+++++ +...++.+ |+++.-+++.+.+..........+.+ .+.++|| -.-.-.++.+.+ +||
T Consensus 142 A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pil~~~~l---~~G 218 (330)
T COG2423 142 ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWL---KPG 218 (330)
T ss_pred HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCeecHhhc---CCC
Confidence 999999999 55556666 88888887776654443332112222 1333443 111233444444 799
Q ss_pred ceeecccc-------cCCc-CCCCCceeecCCc
Q 006623 546 TIFIPYTQ-------IPPR-KLRKDCFYHSTPA 570 (638)
Q Consensus 546 ~~f~~~~~-------~~~~-~~R~dc~y~~~~a 570 (638)
+|+.-+.. ++++ -.|-||.+-+.+.
T Consensus 219 ~hI~aiGad~p~k~Eld~e~l~ra~~vvvD~~~ 251 (330)
T COG2423 219 THINAIGADAPGKRELDPEVLARADRVVVDSLE 251 (330)
T ss_pred cEEEecCCCCcccccCCHHHHHhcCeEEEcCHH
Confidence 99998875 4444 3345566655554
No 232
>PLN02214 cinnamoyl-CoA reductase
Probab=91.26 E-value=0.4 Score=51.36 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=30.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (638)
.++|+|+|++| -||+++++.|.++|.+|.. |+.++
T Consensus 10 ~~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 10 GKTVCVTGAGG--YIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 45799999999 9999999999999999987 65543
No 233
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.25 E-value=0.33 Score=50.16 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 497 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~ 497 (638)
.+.++++|+++.+-||+++|+.|+++|.+|.+ |++
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~ 43 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE 43 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence 46799999993126999999999999999998 554
No 234
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=91.23 E-value=0.38 Score=50.49 Aligned_cols=37 Identities=16% Similarity=0.119 Sum_probs=31.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~ 501 (638)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+
T Consensus 5 ~k~vlVtG~~G--~IG~~l~~~L~~~G~~V~~~~r~~~~~~ 43 (325)
T PLN02989 5 GKVVCVTGASG--YIASWIVKLLLFRGYTINATVRDPKDRK 43 (325)
T ss_pred CCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCCcchh
Confidence 36899999999 9999999999999999876 5655443
No 235
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=91.14 E-value=0.32 Score=53.72 Aligned_cols=137 Identities=14% Similarity=0.121 Sum_probs=74.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhh---CCcchhchhhhcc--ccccceEE-EeecC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLR---IPVEAQHNLVLST--SYAAHKTI-WLVGD 532 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~~~---~~~~~~~~l~~~~--~~~~~~i~-w~vg~ 532 (638)
...+|.++|||| -+|+.+.+.|.++ +.+++. ++++.-+.+... +..+...+..+.. +.+..|+| ..+|.
T Consensus 37 ~~~kVaIvGATG--~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~ 114 (381)
T PLN02968 37 EKKRIFVLGASG--YTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH 114 (381)
T ss_pred cccEEEEECCCC--hHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence 456999999999 9999999999955 888777 332222222111 1111111111111 12223555 55666
Q ss_pred cCChhhhhcCCCCceeecccccCCc-CCCCCceeecC--CccccCCCCccccccccccC---------cc-hhHH-HHHh
Q 006623 533 DLTGKEQARAPKGTIFIPYTQIPPR-KLRKDCFYHST--PAMIIPPSLSNMHSCENWLG---------RR-VMSA-WRIA 598 (638)
Q Consensus 533 ~~~~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~~~--~a~~~P~~~~~~~~~e~~~p---------~~-~~~A-c~a~ 598 (638)
..+.+--..+.+|..+||.|- . .+++|..|.+- -....|+-.+. +-+++| ++ +.-+ |.+-
T Consensus 115 ~~s~~i~~~~~~g~~VIDlSs---~fRl~~~~~y~~~y~~p~~~pe~~~~---~~yglpE~~r~~i~~~~iIAnPgC~~t 188 (381)
T PLN02968 115 GTTQEIIKALPKDLKIVDLSA---DFRLRDIAEYEEWYGHPHRAPELQKE---AVYGLTELQREEIKSARLVANPGCYPT 188 (381)
T ss_pred HHHHHHHHHHhCCCEEEEcCc---hhccCCcccchhccCCCCCCcccchh---hhcccchhCHHHhcCCCEEECCCCHHH
Confidence 555554444568988888872 2 34455655544 22233432221 124443 22 2223 9999
Q ss_pred hhhhhhcC
Q 006623 599 GIIHALEG 606 (638)
Q Consensus 599 ~~v~alEg 606 (638)
+++++|--
T Consensus 189 ~~~laL~P 196 (381)
T PLN02968 189 GIQLPLVP 196 (381)
T ss_pred HHHHHHHH
Confidence 99987743
No 236
>PRK12747 short chain dehydrogenase; Provisional
Probab=91.11 E-value=0.3 Score=49.13 Aligned_cols=42 Identities=24% Similarity=0.268 Sum_probs=33.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ +++++.+++..+
T Consensus 4 ~k~~lItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~ 48 (252)
T PRK12747 4 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYE 48 (252)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH
Confidence 36899999998 9999999999999999987 445666555444
No 237
>PRK12937 short chain dehydrogenase; Provisional
Probab=91.03 E-value=0.38 Score=47.74 Aligned_cols=30 Identities=23% Similarity=0.364 Sum_probs=27.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+++|++| -||+++|+.|+++|.++++
T Consensus 5 ~~~vlItG~~~--~iG~~la~~l~~~g~~v~~ 34 (245)
T PRK12937 5 NKVAIVTGASR--GIGAAIARRLAADGFAVAV 34 (245)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 46899999998 9999999999999999877
No 238
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.98 E-value=0.46 Score=50.88 Aligned_cols=142 Identities=21% Similarity=0.271 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh-
Q 006623 394 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS- 449 (638)
Q Consensus 394 ~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns- 449 (638)
+-+.-+....+.|++.|++.. -|. +++.++++|.|- ++.+..= |++++ .+=|||=+
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~ 123 (297)
T PRK14167 44 ASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHP 123 (297)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 444556667778888888764 343 333446778774 4555522 22233 12244433
Q ss_pred ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHHHH
Q 006623 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLK 504 (638)
Q Consensus 450 ---------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~l~ 504 (638)
-|+..|++=+ +-.-++|+++|... -||+-+|..|.++ +..|++ .++
T Consensus 124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~------- 194 (297)
T PRK14167 124 ENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSD--IVGKPMANLLIQKADGGNATVTVCHSR------- 194 (297)
T ss_pred hhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--ccHHHHHHHHhcCccCCCCEEEEeCCC-------
Confidence 4666666544 44678999999998 9999999999987 788888 221
Q ss_pred hhCCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 505 LRIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 505 ~~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
..+|.+.+ -+|+.+|.++|+ .++++.. ++|+++||+. +..
T Consensus 195 -------T~~l~~~~-~~ADIvIsAvGkp~~i~~~~i---k~gaiVIDvG-in~ 236 (297)
T PRK14167 195 -------TDDLAAKT-RRADIVVAAAGVPELIDGSML---SEGATVIDVG-INR 236 (297)
T ss_pred -------CCCHHHHH-hhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence 22333333 245555567775 5788777 9999999998 555
No 239
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=90.97 E-value=0.32 Score=49.27 Aligned_cols=42 Identities=17% Similarity=0.168 Sum_probs=33.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~ 506 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ | +++..+++.++
T Consensus 7 ~k~~lItGa~~--gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~ 51 (261)
T PRK08936 7 GKVVVITGGST--GLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEE 51 (261)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence 46899999998 9999999999999999987 4 33444444433
No 240
>PRK07985 oxidoreductase; Provisional
Probab=90.92 E-value=0.33 Score=50.81 Aligned_cols=41 Identities=22% Similarity=0.323 Sum_probs=32.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKL 505 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~--~~~~~~l~~ 505 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+ .++.+++++
T Consensus 49 ~k~vlITGas~--gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~ 93 (294)
T PRK07985 49 DRKALVTGGDS--GIGRAAAIAYAREGADVAISYLPVEEEDAQDVKK 93 (294)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHH
Confidence 36899999998 9999999999999999988 32 334555543
No 241
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.90 E-value=0.57 Score=49.91 Aligned_cols=144 Identities=21% Similarity=0.193 Sum_probs=91.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCC
Q 006623 392 REAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGS 448 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gn 448 (638)
..+-+.-++.-++.|++.|++. +-|- +++..+++|.|- ++.++.= |++++ .+=|||=
T Consensus 44 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl 123 (285)
T PRK10792 44 DPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGF 123 (285)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCcc
Confidence 3345555677778889999884 4443 233336788773 3555422 22232 1223443
Q ss_pred h----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006623 449 S----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (638)
Q Consensus 449 s----------------ltaavv~~~ip-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~ 506 (638)
+ -|++.|++-+. -.-++|+++|... -||+-+|..|.++|-.|++ .++
T Consensus 124 ~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVG~Pla~lL~~~~atVtv~hs~--------- 192 (285)
T PRK10792 124 HPYNVGRLAQRIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASN--IVGRPMSLELLLAGCTVTVCHRF--------- 192 (285)
T ss_pred ChhhHhHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCeEEEEECC---------
Confidence 2 36777766553 3578999999996 8999999999999999999 221
Q ss_pred CCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 507 IPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
..+|.+.+ -+++.++..+|+ .++++.. ++|+++||+. +.+
T Consensus 193 -----T~~l~~~~-~~ADIvi~avG~p~~v~~~~v---k~gavVIDvG-in~ 234 (285)
T PRK10792 193 -----TKNLRHHV-RNADLLVVAVGKPGFIPGEWI---KPGAIVIDVG-INR 234 (285)
T ss_pred -----CCCHHHHH-hhCCEEEEcCCCcccccHHHc---CCCcEEEEcc-ccc
Confidence 22333333 244445566653 4666555 9999999998 555
No 242
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.89 E-value=0.38 Score=47.84 Aligned_cols=43 Identities=21% Similarity=0.314 Sum_probs=35.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 5 ~~~~lItG~~g--~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~ 49 (253)
T PRK08217 5 DKVIVITGGAQ--GLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC 49 (253)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45799999998 9999999999999999988 7777776665543
No 243
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.88 E-value=0.71 Score=49.23 Aligned_cols=143 Identities=18% Similarity=0.196 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006623 393 EAINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI----------------- 442 (638)
Q Consensus 393 ~~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------------- 442 (638)
.+-+.-+...++.|++.|++..-.= ++..+++||.|- |+.++.= |++++.
T Consensus 38 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~ 117 (287)
T PRK14181 38 PASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLH 117 (287)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCC
Confidence 3445556777788899998875442 344447777765 3444421 222321
Q ss_pred -----eeecCC-----hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHH
Q 006623 443 -----KVVDGS-----SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEK 502 (638)
Q Consensus 443 -----rvv~Gn-----sltaavv~~~-----ip~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~ 502 (638)
|+..|+ .-|+..|++= |+-.-++|+++|... -||+-+|..|.++ +-.|++ .+
T Consensus 118 p~n~g~l~~g~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~AtVtvchs------ 189 (287)
T PRK14181 118 PVNMGKLLLGETDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSN--IVGKPLAALLMQKHPDTNATVTLLHS------ 189 (287)
T ss_pred hhhHHHHhcCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHhCcCCCCCEEEEeCC------
Confidence 233344 2366666654 455689999999997 9999999999988 789988 21
Q ss_pred HHhhCCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 503 LKLRIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 503 l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
...+|.+.+ -+|+.+|.++|+ -++++.. ++|+++||+. +.+
T Consensus 190 --------~T~~l~~~~-~~ADIvV~AvG~p~~i~~~~i---k~GavVIDvG-in~ 232 (287)
T PRK14181 190 --------QSENLTEIL-KTADIIIAAIGVPLFIKEEMI---AEKAVIVDVG-TSR 232 (287)
T ss_pred --------CCCCHHHHH-hhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 122333333 234445567775 4677766 9999999998 554
No 244
>PRK08303 short chain dehydrogenase; Provisional
Probab=90.84 E-value=0.29 Score=51.74 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=29.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC 496 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~ 496 (638)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+
T Consensus 8 ~k~~lITGgs~--GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 8 GKVALVAGATR--GAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecc
Confidence 46899999997 9999999999999999988 65
No 245
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=90.80 E-value=0.43 Score=52.34 Aligned_cols=144 Identities=16% Similarity=0.150 Sum_probs=93.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEEe--ccc-------ccccccccCC---ceeeecC-CCCcce----------------
Q 006623 392 REAINSLIEEAILEADAKGVKVISL--GLL-------NQGEELNRNG---EIYLERQ-PNKLKI---------------- 442 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~L--G~l-------n~~e~ln~~g---~~~~~k~-p~~L~i---------------- 442 (638)
..+-+.-+...++.|++.|++..-. -.- +.+++||.|- |+.++.= |++++.
T Consensus 114 dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl 193 (364)
T PLN02616 114 RKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGF 193 (364)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 3445555677778899999986543 222 2226678874 3555422 332331
Q ss_pred ------eeecC--C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHH
Q 006623 443 ------KVVDG--S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLK 504 (638)
Q Consensus 443 ------rvv~G--n----sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~ 504 (638)
|+..| + .-|++.|++-+ +-.-++|+|+|... -||+-+|..|.++|-.|++ .++
T Consensus 194 ~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~--iVGkPLa~LL~~~~ATVTicHs~------- 264 (364)
T PLN02616 194 HPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSR------- 264 (364)
T ss_pred ChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCeEEEeCCC-------
Confidence 23333 2 44677776654 33688999999998 9999999999999999999 221
Q ss_pred hhCCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 505 LRIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 505 ~~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
..+|.+.+ -+||.+|.++|+ -++++.. ++|+++||+- +..
T Consensus 265 -------T~nl~~~~-r~ADIVIsAvGkp~~i~~d~v---K~GAvVIDVG-In~ 306 (364)
T PLN02616 265 -------TKNPEEIT-READIIISAVGQPNMVRGSWI---KPGAVVIDVG-INP 306 (364)
T ss_pred -------CCCHHHHH-hhCCEEEEcCCCcCcCCHHHc---CCCCEEEecc-ccc
Confidence 23333333 245545567775 4777777 9999999997 554
No 246
>PRK08278 short chain dehydrogenase; Provisional
Probab=90.77 E-value=0.39 Score=49.43 Aligned_cols=34 Identities=12% Similarity=0.221 Sum_probs=29.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.+
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 6 GKTLFITGASR--GIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecccc
Confidence 36799999998 9999999999999999988 5543
No 247
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.75 E-value=0.49 Score=50.67 Aligned_cols=144 Identities=19% Similarity=0.189 Sum_probs=91.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce----------------
Q 006623 392 REAINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI---------------- 442 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i---------------- 442 (638)
..+-+.-+...++.|++.|++..-.= +++..+++|.|- ++.++.= |++++.
T Consensus 44 d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl 123 (297)
T PRK14168 44 SPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGF 123 (297)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccc
Confidence 33455556677778888998875431 122236677774 2444421 222331
Q ss_pred ------eeecCC------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhH
Q 006623 443 ------KVVDGS------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDY 500 (638)
Q Consensus 443 ------rvv~Gn------sltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~ 500 (638)
|+..|+ .-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++ +-.|++ .++
T Consensus 124 ~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~atVtv~hs~--- 198 (297)
T PRK14168 124 HPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSN--IVGKPIANMMTQKGPGANATVTIVHTR--- 198 (297)
T ss_pred ChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cccHHHHHHHHhcccCCCCEEEEecCC---
Confidence 333443 34666666544 44678999999998 9999999999988 788988 221
Q ss_pred HHHHhhCCcchhchhhhccccccceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 501 EKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 501 ~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
..+|.+.+ -+|+.+|.++|+ .++++.. ++|+++||+. ++.
T Consensus 199 -----------T~~l~~~~-~~ADIvVsAvGkp~~i~~~~i---k~gavVIDvG-in~ 240 (297)
T PRK14168 199 -----------SKNLARHC-QRADILIVAAGVPNLVKPEWI---KPGATVIDVG-VNR 240 (297)
T ss_pred -----------CcCHHHHH-hhCCEEEEecCCcCccCHHHc---CCCCEEEecC-CCc
Confidence 12333333 244445566675 4788777 9999999997 554
No 248
>PRK06483 dihydromonapterin reductase; Provisional
Probab=90.65 E-value=0.4 Score=47.71 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=30.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (638)
.+.|+++|++| -||+++|+.|+++|.+|++ |++++
T Consensus 2 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQ--RIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 35799999998 9999999999999999988 65543
No 249
>PRK06123 short chain dehydrogenase; Provisional
Probab=90.65 E-value=0.37 Score=48.03 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=32.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (638)
+.++++|++| -||+++|+.|+++|.+|.+ +++++.+++.++
T Consensus 3 ~~~lVtG~~~--~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~ 46 (248)
T PRK06123 3 KVMIITGASR--GIGAATALLAAERGYAVCLNYLRNRDAAEAVVQA 46 (248)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHH
Confidence 4689999998 9999999999999988877 444555544433
No 250
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=90.63 E-value=0.21 Score=51.38 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=29.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (638)
.|+|+|||| .||+.+++.|.++|.+|.. |+.++
T Consensus 1 ~ilVtGatG--~iG~~vv~~L~~~g~~V~~~~R~~~~ 35 (285)
T TIGR03649 1 TILLTGGTG--KTASRIARLLQAASVPFLVASRSSSS 35 (285)
T ss_pred CEEEEcCCC--hHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 389999999 9999999999999998888 77654
No 251
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=90.62 E-value=0.53 Score=49.91 Aligned_cols=61 Identities=21% Similarity=0.176 Sum_probs=44.6
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCC
Q 006623 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~ 508 (638)
|||.-...+.--+..+...++|++.||-| .|||++-+|++.|++ +.+ |+.+|-++|.+++.
T Consensus 109 TD~~Gf~~~L~~~~~~~~~k~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~ 172 (283)
T PRK14027 109 TDVSGFGRGMEEGLPNAKLDSVVQVGAGG---VGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN 172 (283)
T ss_pred CCHHHHHHHHHhcCcCcCCCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence 66666665553222233457899999987 589999999999974 555 88899999987653
No 252
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=90.62 E-value=0.5 Score=50.57 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=28.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
..++|+|+|+|| =||+.+++.|.++|.+|+.
T Consensus 14 ~~~~vlVtGatG--fiG~~lv~~L~~~g~~V~~ 44 (348)
T PRK15181 14 APKRWLITGVAG--FIGSGLLEELLFLNQTVIG 44 (348)
T ss_pred cCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 457899999999 9999999999999999876
No 253
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.59 E-value=0.43 Score=47.28 Aligned_cols=42 Identities=21% Similarity=0.294 Sum_probs=33.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (638)
.+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+++.++
T Consensus 5 ~~~ilI~Gasg--~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~ 49 (247)
T PRK05565 5 GKVAIVTGASG--GIGRAIAELLAKEGAKVVIAYDINEEAAQELLEE 49 (247)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 35799999998 9999999999999999877 555555554443
No 254
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.46 E-value=0.42 Score=48.72 Aligned_cols=44 Identities=23% Similarity=0.326 Sum_probs=34.7
Q ss_pred CcEEEEecc--cCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhhCC
Q 006623 463 TAHVLLRGT--VTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Ga--tg~~kig~ava~~L~~~~~~v~~--~~~--~~~~~l~~~~~ 508 (638)
.+.|+++|+ ++ -||+++|+.|+++|.+|.+ |++ +..++++++++
T Consensus 7 ~k~~lItGa~~s~--GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~ 56 (256)
T PRK07889 7 GKRILVTGVITDS--SIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP 56 (256)
T ss_pred CCEEEEeCCCCcc--hHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC
Confidence 357899999 54 8999999999999999998 443 44677766654
No 255
>PRK06484 short chain dehydrogenase; Validated
Probab=90.45 E-value=0.43 Score=53.63 Aligned_cols=45 Identities=13% Similarity=0.160 Sum_probs=39.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
..+.|+++|+++ -||+++|+.|.++|.+|.+ |+.++++++.++++
T Consensus 4 ~~k~~lITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (520)
T PRK06484 4 QSRVVLVTGAAG--GIGRAACQRFARAGDQVVVADRNVERARERADSLG 50 (520)
T ss_pred CCeEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 346889999997 9999999999999999988 88899988877764
No 256
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=90.44 E-value=0.37 Score=44.14 Aligned_cols=97 Identities=9% Similarity=0.069 Sum_probs=52.4
Q ss_pred EEEEecccCchhhHHHHHHHHh-ccCcEEEe---cch---hhHHHHHhhCCcchhchhhhcc--ccccceEE-EeecCcC
Q 006623 465 HVLLRGTVTANKVANAVASSLC-QMGIKVAT---ICK---DDYEKLKLRIPVEAQHNLVLST--SYAAHKTI-WLVGDDL 534 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~-~~~~~v~~---~~~---~~~~~l~~~~~~~~~~~l~~~~--~~~~~~i~-w~vg~~~ 534 (638)
+|.++|||| -+|+.+++.|. .....+.. +++ +++....+.........+.+.. .....++| ...++..
T Consensus 1 rV~IvGAtG--~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~ 78 (121)
T PF01118_consen 1 RVAIVGATG--YVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA 78 (121)
T ss_dssp EEEEESTTS--HHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH
T ss_pred CEEEECCCC--HHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH
Confidence 589999999 99999999999 55666555 333 2344333321111222211211 12333554 4555544
Q ss_pred Chhhhh-cCCCCceeecccccCCc-CCCCCceee
Q 006623 535 TGKEQA-RAPKGTIFIPYTQIPPR-KLRKDCFYH 566 (638)
Q Consensus 535 ~~~~q~-~a~~G~~f~~~~~~~~~-~~R~dc~y~ 566 (638)
+.+--. -+++|..++|.| .. .+.+||.|.
T Consensus 79 ~~~~~~~~~~~g~~ViD~s---~~~R~~~~~~~~ 109 (121)
T PF01118_consen 79 SKELAPKLLKAGIKVIDLS---GDFRLDDDVPYG 109 (121)
T ss_dssp HHHHHHHHHHTTSEEEESS---STTTTSTTSEEE
T ss_pred HHHHHHHHhhCCcEEEeCC---HHHhCCCCCCEE
Confidence 433222 248999888887 22 333566664
No 257
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=90.41 E-value=0.37 Score=48.14 Aligned_cols=42 Identities=24% Similarity=0.312 Sum_probs=34.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (638)
.+.++++|++| -||+++|+.|+++|.+|++ +++++.+++.++
T Consensus 6 ~~~~lItG~s~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (247)
T PRK12935 6 GKVAIVTGGAK--GIGKAITVALAQEGAKVVINYNSSKEAAENLVNE 50 (247)
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHH
Confidence 46899999998 9999999999999999987 455666555444
No 258
>PRK09134 short chain dehydrogenase; Provisional
Probab=90.40 E-value=0.49 Score=47.82 Aligned_cols=43 Identities=26% Similarity=0.416 Sum_probs=33.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+ ++.++.+++.++
T Consensus 8 ~~k~vlItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~ 53 (258)
T PRK09134 8 APRAALVTGAAR--RIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAE 53 (258)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence 346899999998 9999999999999999976 344555555444
No 259
>PRK06720 hypothetical protein; Provisional
Probab=90.39 E-value=0.44 Score=46.48 Aligned_cols=43 Identities=16% Similarity=0.141 Sum_probs=34.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
..+.++++|+++ -||+++|+.|+++|.+|.+ ++.++.++..++
T Consensus 15 ~gk~~lVTGa~~--GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~ 59 (169)
T PRK06720 15 AGKVAIVTGGGI--GIGRNTALLLAKQGAKVIVTDIDQESGQATVEE 59 (169)
T ss_pred CCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 356889999997 9999999999999999988 666655544444
No 260
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=90.38 E-value=0.39 Score=48.67 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=28.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
..+.|+++|+++ -||+++|+.|+++|.+|.+
T Consensus 7 ~~k~~lItGas~--gIG~aia~~l~~~G~~vv~ 37 (251)
T PRK12481 7 NGKVAIITGCNT--GLGQGMAIGLAKAGADIVG 37 (251)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 346899999997 9999999999999999998
No 261
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.32 E-value=0.52 Score=50.42 Aligned_cols=146 Identities=18% Similarity=0.141 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006623 392 REAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (638)
Q Consensus 392 ~~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn 448 (638)
..+-+.-++..++.|++.|+++ .-|. +++..++||.|- ++.++.= |++++. +=|||=
T Consensus 43 ~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl 122 (296)
T PRK14188 43 DPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGL 122 (296)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccC
Confidence 3345566777888999999984 4443 223336788883 3555522 333431 224554
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEec-chhhHHHHHhh
Q 006623 449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI-CKDDYEKLKLR 506 (638)
Q Consensus 449 s----------------ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~-~~~~~~~l~~~ 506 (638)
+ -|++.|++=+ +-.-++|.++|.++ -+|+.+|+.|.++|..|++- ++.+
T Consensus 123 ~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~--~mG~PmA~~L~~~g~tVtv~~~rT~------- 193 (296)
T PRK14188 123 HVVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSN--LVGKPMAQLLLAANATVTIAHSRTR------- 193 (296)
T ss_pred ChhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCc--chHHHHHHHHHhCCCEEEEECCCCC-------
Confidence 3 3566666433 44688999999998 99999999999999999992 2221
Q ss_pred CCcchhchhhhccccccceEEEeecCcCChhhhhcCCCCceeecccccCC
Q 006623 507 IPVEAQHNLVLSTSYAAHKTIWLVGDDLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 507 ~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
++.+.+ -+++.|+..+|+.= --+..++++|++++|+. +..
T Consensus 194 -------~l~e~~-~~ADIVIsavg~~~-~v~~~~lk~GavVIDvG-in~ 233 (296)
T PRK14188 194 -------DLPAVC-RRADILVAAVGRPE-MVKGDWIKPGATVIDVG-INR 233 (296)
T ss_pred -------CHHHHH-hcCCEEEEecCChh-hcchheecCCCEEEEcC-Ccc
Confidence 122222 12333335555531 12223469999999998 543
No 262
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=90.26 E-value=0.5 Score=51.51 Aligned_cols=86 Identities=17% Similarity=0.086 Sum_probs=61.6
Q ss_pred hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCcchhchhhhcccccc
Q 006623 450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 523 (638)
Q Consensus 450 ltaavv~~~i-----p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 523 (638)
-|++.|++=+ +-.-++|+|+|... -||+-+|..|.++|-.|++ .++ ..+|.+.+ -+|
T Consensus 196 CTp~avi~LL~~~~i~l~GK~vvVIGRS~--iVGkPla~LL~~~~ATVTicHs~--------------T~nl~~~~-~~A 258 (345)
T PLN02897 196 CTPKGCVELLIRSGVEIAGKNAVVIGRSN--IVGLPMSLLLQRHDATVSTVHAF--------------TKDPEQIT-RKA 258 (345)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCEEEEEcCC--------------CCCHHHHH-hhC
Confidence 4666666544 44688999999997 9999999999999999999 221 12333333 244
Q ss_pred ceEEEeecC--cCChhhhhcCCCCceeecccccCC
Q 006623 524 HKTIWLVGD--DLTGKEQARAPKGTIFIPYTQIPP 556 (638)
Q Consensus 524 ~~i~w~vg~--~~~~~~q~~a~~G~~f~~~~~~~~ 556 (638)
+.+|.++|+ .++++.. ++|+++||+. +.+
T Consensus 259 DIvIsAvGkp~~v~~d~v---k~GavVIDVG-in~ 289 (345)
T PLN02897 259 DIVIAAAGIPNLVRGSWL---KPGAVVIDVG-TTP 289 (345)
T ss_pred CEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence 445567775 4777776 9999999998 655
No 263
>PLN02650 dihydroflavonol-4-reductase
Probab=90.26 E-value=0.36 Score=51.45 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=33.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l 503 (638)
..++|+|+|++| -||+++++.|.++|.+|.. |+.++.+.+
T Consensus 4 ~~k~iLVTGatG--fIGs~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (351)
T PLN02650 4 QKETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPANVKKV 45 (351)
T ss_pred CCCEEEEeCCcH--HHHHHHHHHHHHCCCEEEEEEcCcchhHHH
Confidence 356899999999 9999999999999999976 666555444
No 264
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=90.25 E-value=0.9 Score=47.94 Aligned_cols=61 Identities=18% Similarity=0.159 Sum_probs=45.7
Q ss_pred ecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCC
Q 006623 445 VDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 445 v~Gnsltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~ 508 (638)
|||.-...+.--+.+ +...++|+|+||- -.|||++.+|.+.|+ ++++ |+.+|-++|.++..
T Consensus 105 TD~~G~~~~l~~~~~~~~~~~k~vlvlGaG---Gaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~ 170 (282)
T TIGR01809 105 TDWDGIAGALANIGKFEPLAGFRGLVIGAG---GTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV 170 (282)
T ss_pred CCHHHHHHHHHhhCCccccCCceEEEEcCc---HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence 666666666543332 2245789999997 579999999999997 5777 99999999987754
No 265
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.21 E-value=0.48 Score=49.01 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=34.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~---~~~~~~l~~~~~ 508 (638)
.+.|+++|+++.+-||+++|+.|+++|.+|.+ |+ .++.++++++++
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~ 60 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG 60 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC
Confidence 36799999972137999999999999999988 44 355666665543
No 266
>PRK07577 short chain dehydrogenase; Provisional
Probab=90.21 E-value=0.32 Score=48.08 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=29.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (638)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.+
T Consensus 4 k~vlItG~s~--~iG~~ia~~l~~~G~~v~~~~r~~~ 38 (234)
T PRK07577 4 RTVLVTGATK--GIGLALSLRLANLGHQVIGIARSAI 38 (234)
T ss_pred CEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5799999998 9999999999999999988 5443
No 267
>PRK07856 short chain dehydrogenase; Provisional
Probab=90.18 E-value=0.34 Score=48.80 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=30.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (638)
.+.++++|++| -||+++|+.|+++|.+|++ |+.++
T Consensus 6 ~k~~lItGas~--gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 6 GRVVLVTGGTR--GIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 47899999998 9999999999999999988 65543
No 268
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=90.18 E-value=0.46 Score=47.12 Aligned_cols=41 Identities=24% Similarity=0.169 Sum_probs=32.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~ 506 (638)
+.|+++|++| -||+++++.|+++|.+|.+ |+.++.+++.++
T Consensus 2 ~~~lItGa~g--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 45 (247)
T PRK09730 2 AIALVTGGSR--GIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNL 45 (247)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH
Confidence 4689999998 9999999999999999865 666655544443
No 269
>PLN02686 cinnamoyl-CoA reductase
Probab=90.06 E-value=0.46 Score=51.57 Aligned_cols=41 Identities=27% Similarity=0.307 Sum_probs=34.2
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006623 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (638)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l 503 (638)
...+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+++
T Consensus 51 ~~~k~VLVTGatG--fIG~~lv~~L~~~G~~V~~~~r~~~~~~~l 93 (367)
T PLN02686 51 AEARLVCVTGGVS--FLGLAIVDRLLRHGYSVRIAVDTQEDKEKL 93 (367)
T ss_pred CCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3567899999999 9999999999999999975 666655554
No 270
>PRK06114 short chain dehydrogenase; Provisional
Probab=90.03 E-value=0.46 Score=48.02 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=33.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKL 505 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~ 505 (638)
..+.++++|++| -||+++|+.|+++|.+|.+ |+. +..+++.+
T Consensus 7 ~~k~~lVtG~s~--gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 51 (254)
T PRK06114 7 DGQVAFVTGAGS--GIGQRIAIGLAQAGADVALFDLRTDDGLAETAE 51 (254)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH
Confidence 346899999998 9999999999999999998 543 33444433
No 271
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.98 E-value=0.46 Score=48.26 Aligned_cols=32 Identities=16% Similarity=0.206 Sum_probs=28.4
Q ss_pred CcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cc
Q 006623 463 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--IC 496 (638)
Q Consensus 463 ~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~~--~~ 496 (638)
.+.|+++|++ + -||+++|+.|+++|.+|.+ |+
T Consensus 7 ~k~~lItGas~~~--gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 7 GKKIVVMGVANKR--SIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred CCEEEEeCCCCCC--chHHHHHHHHHHCCCEEEEecCc
Confidence 3678999998 4 7999999999999999998 55
No 272
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=89.98 E-value=0.47 Score=50.58 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=29.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (638)
++|+++|++| =||+++|+.|+++|.+|+. |+++.
T Consensus 5 k~ilItGatG--~IG~~l~~~L~~~G~~V~~~~r~~~~ 40 (349)
T TIGR02622 5 KKVLVTGHTG--FKGSWLSLWLLELGAEVYGYSLDPPT 40 (349)
T ss_pred CEEEEECCCC--hhHHHHHHHHHHCCCEEEEEeCCCcc
Confidence 6799999999 9999999999999999987 54443
No 273
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=89.86 E-value=0.42 Score=48.33 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=28.8
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
...+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 8 l~~k~~lItG~~~--gIG~a~a~~l~~~G~~vv~ 39 (253)
T PRK08993 8 LEGKVAVVTGCDT--GLGQGMALGLAEAGCDIVG 39 (253)
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 3456899999998 9999999999999999987
No 274
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.81 E-value=0.51 Score=48.97 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=34.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~~~ 508 (638)
.+.|+++|+++.+-||+|+|+.|+++|.+|.+ |++ ++.+++.++++
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~ 55 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG 55 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence 36889999971137999999999999999998 653 45566655543
No 275
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.77 E-value=0.52 Score=47.25 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=27.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 k~vlItG~sg--~iG~~la~~L~~~g~~vi~ 31 (256)
T PRK12745 3 PVALVTGGRR--GIGLGIARALAAAGFDLAI 31 (256)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 5799999998 9999999999999999988
No 276
>PRK07023 short chain dehydrogenase; Provisional
Probab=89.74 E-value=0.37 Score=48.16 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=29.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (638)
..|+++|++| -||+++|+.|+++|.+|++ |+.+
T Consensus 2 ~~vlItGasg--giG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 2 VRAIVTGHSR--GLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred ceEEEecCCc--chHHHHHHHHHhCCCEEEEEecCcc
Confidence 3689999998 9999999999999999988 5544
No 277
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.73 E-value=0.52 Score=49.57 Aligned_cols=43 Identities=16% Similarity=0.222 Sum_probs=33.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR 506 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~ 506 (638)
+.+.++|+|++| -||+++|+.|+++|.+|.+ + +.++.+++.++
T Consensus 11 ~~k~~lVTGas~--gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~ 56 (306)
T PRK07792 11 SGKVAVVTGAAA--GLGRAEALGLARLGATVVVNDVASALDASDVLDE 56 (306)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHH
Confidence 456899999998 9999999999999999998 3 33445554444
No 278
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=89.67 E-value=0.46 Score=47.92 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=32.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++ ..+++.++
T Consensus 8 ~k~vlVtGas~--gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~ 50 (260)
T PRK12823 8 GKVVVVTGAAQ--GIGRGVALRAAAEGARVVLVDRSE-LVHEVAAE 50 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHH
Confidence 46799999998 9999999999999999988 543 33344333
No 279
>PRK06198 short chain dehydrogenase; Provisional
Probab=89.65 E-value=0.45 Score=47.87 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=33.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKL 505 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~ 505 (638)
.+.|+++|++| -||+++|+.|+++|.+ |.+ |+.++.+.+.+
T Consensus 6 ~k~vlItGa~g--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~ 49 (260)
T PRK06198 6 GKVALVTGGTQ--GLGAAIARAFAERGAAGLVICGRNAEKGEAQAA 49 (260)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 46799999998 9999999999999999 777 66666554443
No 280
>PRK12827 short chain dehydrogenase; Provisional
Probab=89.65 E-value=0.57 Score=46.43 Aligned_cols=42 Identities=19% Similarity=0.266 Sum_probs=33.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe------cchhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT------ICKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~------~~~~~~~~l~~~ 506 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..+++.++
T Consensus 6 ~~~ilItGasg--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~ 53 (249)
T PRK12827 6 SRRVLITGGSG--GLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAG 53 (249)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHH
Confidence 36799999998 9999999999999999877 244445544444
No 281
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=89.60 E-value=0.45 Score=44.77 Aligned_cols=69 Identities=17% Similarity=0.178 Sum_probs=43.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCcchhchhhhccccccceEEEe--ecCcCCh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWL--VGDDLTG 536 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~--vg~~~~~ 536 (638)
.-+|-++|+- |+|.+++++|.+.|..|.- |+.+.-++++.+++.....++.+.. +++|++++ -||.|.+
T Consensus 10 ~l~I~iIGaG---rVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~--~~aDlv~iavpDdaI~~ 83 (127)
T PF10727_consen 10 RLKIGIIGAG---RVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEIL--RDADLVFIAVPDDAIAE 83 (127)
T ss_dssp --EEEEECTS---CCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGG--CC-SEEEE-S-CCHHHH
T ss_pred ccEEEEECCC---HHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccccc--ccCCEEEEEechHHHHH
Confidence 4578999994 9999999999999999876 7777888888888877666655544 34456522 2555544
No 282
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.42 E-value=0.62 Score=47.52 Aligned_cols=46 Identities=17% Similarity=0.234 Sum_probs=33.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~---~~~~l~~~~ 507 (638)
..+.|+++|+++.+-||+++|+.|+++|.+|.+ |+.+ +.+++++++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~ 59 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL 59 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh
Confidence 357899999982016999999999999999988 5543 245555444
No 283
>PRK08226 short chain dehydrogenase; Provisional
Probab=89.42 E-value=0.61 Score=47.09 Aligned_cols=33 Identities=15% Similarity=0.351 Sum_probs=29.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 497 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~ 497 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ |++
T Consensus 6 ~~~~lItG~s~--giG~~la~~l~~~G~~Vv~~~r~~ 40 (263)
T PRK08226 6 GKTALITGALQ--GIGEGIARVFARHGANLILLDISP 40 (263)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCH
Confidence 46899999998 9999999999999999998 554
No 284
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=89.41 E-value=0.71 Score=50.96 Aligned_cols=85 Identities=18% Similarity=0.210 Sum_probs=57.1
Q ss_pred HHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHH----------HHHHhcCcCCCcEEEEecccCchh
Q 006623 407 DAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAA----------AVVVNSLPKTTAHVLLRGTVTANK 476 (638)
Q Consensus 407 ~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnslta----------avv~~~ip~~~~~V~~~Gatg~~k 476 (638)
.+.|+.|+++- . +|. .+ .|. -+.++-.|..+.+ ...+...+...++|+++|. | +
T Consensus 178 ~~~~~~vi~i~--r-------~~~-~~--~p~-~~~~l~~gD~l~v~g~~~~l~~~~~~~~~~~~~~~~iiIiG~-G--~ 241 (453)
T PRK09496 178 PDIDVRVVAIF--R-------GGR-LI--IPR-GDTVIEAGDEVYFIGAREHIRAVMSEFGRLEKPVKRVMIVGG-G--N 241 (453)
T ss_pred CCCceEEEEEE--E-------CCE-EE--cCC-CCcEecCCCEEEEEeCHHHHHHHHHHhCccCCCCCEEEEECC-C--H
Confidence 35788888773 2 222 11 244 4444444444433 2223333335789999999 5 9
Q ss_pred hHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 477 VANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 477 ig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+|+.+++.|.++|.+|++ +++++.++++++.
T Consensus 242 ~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~ 274 (453)
T PRK09496 242 IGYYLAKLLEKEGYSVKLIERDPERAEELAEEL 274 (453)
T ss_pred HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC
Confidence 999999999999999988 7888888887753
No 285
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=89.29 E-value=0.42 Score=47.45 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=30.5
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR 506 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~ 506 (638)
|+++|++| -||+++|+.|+++|.+|.+ + +.++.+.+.++
T Consensus 1 vlItGas~--giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~ 42 (239)
T TIGR01831 1 VLVTGASR--GIGRAIANRLAADGFEICVHYHSGRSDAESVVSA 42 (239)
T ss_pred CEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence 58999997 9999999999999999877 3 34445544443
No 286
>PRK06523 short chain dehydrogenase; Provisional
Probab=89.27 E-value=0.42 Score=48.17 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=30.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+++
T Consensus 8 ~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 8 AGKRALVTGGTK--GIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCCEEEEECCCC--chhHHHHHHHHHCCCEEEEEeCChh
Confidence 346899999998 9999999999999999988 5543
No 287
>PRK06128 oxidoreductase; Provisional
Probab=89.26 E-value=0.48 Score=49.51 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=28.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 55 ~k~vlITGas~--gIG~~~a~~l~~~G~~V~i 84 (300)
T PRK06128 55 GRKALITGADS--GIGRATAIAFAREGADIAL 84 (300)
T ss_pred CCEEEEecCCC--cHHHHHHHHHHHcCCEEEE
Confidence 46899999998 9999999999999999988
No 288
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=89.25 E-value=0.55 Score=52.08 Aligned_cols=87 Identities=16% Similarity=0.098 Sum_probs=56.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcchhchhhhcccc-------ccceEE-EeecC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY-------AAHKTI-WLVGD 532 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~-------~~~~i~-w~vg~ 532 (638)
..|++.|+ | .||+++|..|+++| .+|++ |+.+...+++.....+.+--.+++.+. +.-++| .++.-
T Consensus 2 ~~ilviGa-G--~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 2 MKILVIGA-G--GVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CcEEEECC-c--hhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 47899999 7 99999999999998 88888 999999988777422111111122211 111333 45544
Q ss_pred cCChhhh-hcCCCCceeecccc
Q 006623 533 DLTGKEQ-ARAPKGTIFIPYTQ 553 (638)
Q Consensus 533 ~~~~~~q-~~a~~G~~f~~~~~ 553 (638)
..+..=. .-++.|+.++|.|-
T Consensus 79 ~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 79 FVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred hhhHHHHHHHHHhCCCEEEccc
Confidence 4444322 34578999999995
No 289
>PRK05855 short chain dehydrogenase; Validated
Probab=89.18 E-value=0.51 Score=52.96 Aligned_cols=43 Identities=19% Similarity=0.226 Sum_probs=37.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
...++++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 315 ~~~~lv~G~s~--giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~ 359 (582)
T PRK05855 315 GKLVVVTGAGS--GIGRETALAFAREGAEVVASDIDEAAAERTAELI 359 (582)
T ss_pred CCEEEEECCcC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46789999998 9999999999999999988 8888888776654
No 290
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=89.05 E-value=0.56 Score=51.11 Aligned_cols=92 Identities=17% Similarity=0.121 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHH---hcCc-CCCcEEEEec
Q 006623 395 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVV---NSLP-KTTAHVLLRG 470 (638)
Q Consensus 395 in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~---~~ip-~~~~~V~~~G 470 (638)
|=-+|.+|...|.+.|.-=--| |. |-.. .+.+.|.-. -+.++-+|..=.++++. +..+ -+.++|+|+|
T Consensus 110 IlGQVK~Ay~~A~~~g~~g~~L---~~---lf~~-A~~~aKrVR-teT~I~~~~vSv~s~av~~~~~~~~l~~k~vLvIG 181 (338)
T PRK00676 110 IQGQVKRAYLKAARERKLPFAL---HF---LFQK-ALKEGKVFR-SKGGAPYAEVTIESVVQQELRRRQKSKKASLLFIG 181 (338)
T ss_pred HHHHHHHHHHHHHHcCCchHHH---HH---HHHH-HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHhCCccCCEEEEEc
Confidence 3445889999999888521111 11 1111 233444422 22444444322222233 3332 2578999999
Q ss_pred ccCchhhHHHHHHHHhccCcE-EEe--cch
Q 006623 471 TVTANKVANAVASSLCQMGIK-VAT--ICK 497 (638)
Q Consensus 471 atg~~kig~ava~~L~~~~~~-v~~--~~~ 497 (638)
+ | ++|+-+|++|.++|++ +++ |+.
T Consensus 182 a-G--em~~l~a~~L~~~g~~~i~v~nRt~ 208 (338)
T PRK00676 182 Y-S--EINRKVAYYLQRQGYSRITFCSRQQ 208 (338)
T ss_pred c-c--HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 9 5 9999999999999854 666 554
No 291
>PLN03139 formate dehydrogenase; Provisional
Probab=89.00 E-value=0.41 Score=53.04 Aligned_cols=102 Identities=13% Similarity=0.153 Sum_probs=63.0
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEee-------c
Q 006623 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV-------G 531 (638)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v-------g 531 (638)
-..++|.++|. | .||+++|+.|...|.+|.. ++..+-+ ..++.+.....+|.++. +.+|+|.+. -
T Consensus 197 L~gktVGIVG~-G--~IG~~vA~~L~afG~~V~~~d~~~~~~~-~~~~~g~~~~~~l~ell--~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 197 LEGKTVGTVGA-G--RIGRLLLQRLKPFNCNLLYHDRLKMDPE-LEKETGAKFEEDLDAML--PKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCCEEEEEee-c--HHHHHHHHHHHHCCCEEEEECCCCcchh-hHhhcCceecCCHHHHH--hhCCEEEEeCCCCHHHH
Confidence 35678999995 5 9999999999999999988 3321111 11222212222333332 222343111 1
Q ss_pred CcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006623 532 DDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 568 (638)
Q Consensus 532 ~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 568 (638)
..++.+....|++|+++|.++| ++.+ +++ -|++.++-
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~l~GAaLDV~~~EP 322 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNARGAIMDTQAVADACSSGHIGGYGGDVWYPQP 322 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCCCchhhHHHHHHHHHcCCceEEEEcCCCCCC
Confidence 2346778899999999999999 4433 444 68887774
No 292
>PRK07201 short chain dehydrogenase; Provisional
Probab=88.97 E-value=0.57 Score=54.14 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=37.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 371 ~k~vlItGas~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 415 (657)
T PRK07201 371 GKVVLITGASS--GIGRATAIKVAEAGATVFLVARNGEALDELVAEI 415 (657)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 8888888776654
No 293
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=88.94 E-value=0.58 Score=52.12 Aligned_cols=37 Identities=24% Similarity=0.289 Sum_probs=32.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~ 501 (638)
.++|+++|++| -||+++|+.|+++|.+|.. |++++.+
T Consensus 178 gK~VLITGASg--GIG~aLA~~La~~G~~Vi~l~r~~~~l~ 216 (406)
T PRK07424 178 GKTVAVTGASG--TLGQALLKELHQQGAKVVALTSNSDKIT 216 (406)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 46899999998 9999999999999999987 6666554
No 294
>PLN02778 3,5-epimerase/4-reductase
Probab=88.93 E-value=0.58 Score=49.28 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=31.2
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 457 ~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
++.|+ .+.+|+++|++| =||+.+++.|.++|.+|+.
T Consensus 2 ~~~~~~~~~kiLVtG~tG--fiG~~l~~~L~~~g~~V~~ 38 (298)
T PLN02778 2 NGTAGSATLKFLIYGKTG--WIGGLLGKLCQEQGIDFHY 38 (298)
T ss_pred CCCCCCCCCeEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 45666 356899999999 9999999999999999975
No 295
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=88.91 E-value=0.72 Score=45.99 Aligned_cols=30 Identities=17% Similarity=0.320 Sum_probs=27.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 ~k~~lVtG~s~--giG~~~a~~l~~~G~~vv~ 32 (246)
T PRK12938 3 QRIAYVTGGMG--GIGTSICQRLHKDGFKVVA 32 (246)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCEEEE
Confidence 36789999998 9999999999999999887
No 296
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=88.79 E-value=0.71 Score=44.22 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=35.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+|.++|+- ..|.|+|..|+++|.+|+| |+++..+.|++.
T Consensus 1 KI~ViGaG---~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~ 41 (157)
T PF01210_consen 1 KIAVIGAG---NWGTALAALLADNGHEVTLWGRDEEQIEEINET 41 (157)
T ss_dssp EEEEESSS---HHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHH
T ss_pred CEEEECcC---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence 58899998 8999999999999999999 888889988876
No 297
>PRK06398 aldose dehydrogenase; Validated
Probab=88.79 E-value=0.46 Score=48.36 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (638)
.+.|+++|++| -||+++|+.|+++|.+|++ |+++
T Consensus 6 gk~vlItGas~--gIG~~ia~~l~~~G~~Vi~~~r~~~ 41 (258)
T PRK06398 6 DKVAIVTGGSQ--GIGKAVVNRLKEEGSNVINFDIKEP 41 (258)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 36899999998 9999999999999999998 5544
No 298
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=88.77 E-value=0.67 Score=49.20 Aligned_cols=105 Identities=16% Similarity=0.187 Sum_probs=62.1
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCC
Q 006623 383 IVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT 462 (638)
Q Consensus 383 ~~~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~~ 462 (638)
|+--.+|.-.++ -+++.+.=..|++.| +.|-. ++.+|.+ .--| |||--...+.--..+...
T Consensus 63 G~nVTiP~K~~~-~~~~D~l~~~A~~iG-------AVNTv--~~~~g~l-~G~N--------TD~~Gf~~~l~~~~~~~~ 123 (288)
T PRK12749 63 GTGVSMPNKQLA-CEYVDELTPAAKLVG-------AINTI--VNDDGYL-RGYN--------TDGTGHIRAIKESGFDIK 123 (288)
T ss_pred EEEECcCCHHHH-HHHhccCCHHHHHhC-------ceeEE--EccCCEE-EEEe--------cCHHHHHHHHHhcCCCcC
Confidence 445556664333 333555555566655 44442 1233321 2223 566665555543344444
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cch---hhHHHHHhhCCc
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICK---DDYEKLKLRIPV 509 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~---~~~~~l~~~~~~ 509 (638)
.++|+|.||-| . ||||+..|++.|+ ++++ |+. ++.++|.+++..
T Consensus 124 ~k~vlvlGaGG--a-arAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~ 173 (288)
T PRK12749 124 GKTMVLLGAGG--A-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE 173 (288)
T ss_pred CCEEEEECCcH--H-HHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence 56899999987 3 8999999998887 5666 763 578888776643
No 299
>PRK07791 short chain dehydrogenase; Provisional
Probab=88.72 E-value=0.63 Score=48.42 Aligned_cols=43 Identities=19% Similarity=0.187 Sum_probs=34.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---------hhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---------~~~~~l~~~~ 507 (638)
.+.++++|+++ -||+++|+.|+++|.+|.+ ++. ++.+++.+++
T Consensus 6 ~k~~lITGas~--GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l 59 (286)
T PRK07791 6 GRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEI 59 (286)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHH
Confidence 46889999997 9999999999999999988 444 5566655554
No 300
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=88.62 E-value=0.69 Score=47.30 Aligned_cols=43 Identities=14% Similarity=0.109 Sum_probs=31.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~ 506 (638)
+.++++|+++.+-||+|+|+.|+++|.+|.+ |+. +..++++++
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~ 56 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEE 56 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHh
Confidence 5789999984125999999999999999988 542 234445443
No 301
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=88.61 E-value=0.73 Score=45.56 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=31.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHH
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLK 504 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~ 504 (638)
+.++++|++| -||+++|+.|+++|.+|++ | ++++.+++.
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~ 42 (242)
T TIGR01829 1 RIALVTGGMG--GIGTAICQRLAKDGYRVAANCGPNEERAEAWL 42 (242)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence 4689999998 9999999999999999887 4 555555443
No 302
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=88.57 E-value=0.5 Score=49.00 Aligned_cols=33 Identities=30% Similarity=0.322 Sum_probs=29.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (638)
+|+++|++| -||+.+|+.|.++|.+|.. |+.++
T Consensus 2 ~vlItG~~G--~iG~~l~~~L~~~g~~V~~~~r~~~~ 36 (328)
T TIGR03466 2 KVLVTGATG--FVGSAVVRLLLEQGEEVRVLVRPTSD 36 (328)
T ss_pred eEEEECCcc--chhHHHHHHHHHCCCEEEEEEecCcc
Confidence 689999999 9999999999999999988 55444
No 303
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=88.28 E-value=1.7 Score=42.43 Aligned_cols=89 Identities=18% Similarity=0.147 Sum_probs=56.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEee-------cC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV-------GD 532 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v-------g~ 532 (638)
..++|.++|.. .||+++|+.|..-|.+|.. ++.+.-+.... ...+ ..+|.+.. +.+|+|.+. -.
T Consensus 35 ~g~tvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~~~-~~~l~ell--~~aDiv~~~~plt~~T~~ 107 (178)
T PF02826_consen 35 RGKTVGIIGYG---RIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FGVE-YVSLDELL--AQADIVSLHLPLTPETRG 107 (178)
T ss_dssp TTSEEEEESTS---HHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TTEE-ESSHHHHH--HH-SEEEE-SSSSTTTTT
T ss_pred CCCEEEEEEEc---CCcCeEeeeeecCCceeEEecccCChhhhccc-ccce-eeehhhhc--chhhhhhhhhccccccce
Confidence 46789999986 9999999999999999999 44433221111 1111 11222222 112233111 25
Q ss_pred cCChhhhhcCCCCceeecccc---cCCc
Q 006623 533 DLTGKEQARAPKGTIFIPYTQ---IPPR 557 (638)
Q Consensus 533 ~~~~~~q~~a~~G~~f~~~~~---~~~~ 557 (638)
.|+.++..++|+|++||-++| |+.+
T Consensus 108 li~~~~l~~mk~ga~lvN~aRG~~vde~ 135 (178)
T PF02826_consen 108 LINAEFLAKMKPGAVLVNVARGELVDED 135 (178)
T ss_dssp SBSHHHHHTSTTTEEEEESSSGGGB-HH
T ss_pred eeeeeeeeccccceEEEeccchhhhhhh
Confidence 678899999999999999999 5554
No 304
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=88.04 E-value=0.82 Score=45.59 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=27.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+++|++| .||+++|+.|+++|.+|.+
T Consensus 6 ~~~vlitGasg--~iG~~l~~~l~~~g~~v~~ 35 (252)
T PRK06077 6 DKVVVVTGSGR--GIGRAIAVRLAKEGSLVVV 35 (252)
T ss_pred CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEE
Confidence 36899999998 9999999999999999876
No 305
>PRK12744 short chain dehydrogenase; Provisional
Probab=88.01 E-value=0.67 Score=46.83 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=26.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 8 ~k~vlItGa~~--gIG~~~a~~l~~~G~~vv~ 37 (257)
T PRK12744 8 GKVVLIAGGAK--NLGGLIARDLAAQGAKAVA 37 (257)
T ss_pred CcEEEEECCCc--hHHHHHHHHHHHCCCcEEE
Confidence 36899999998 9999999999999999554
No 306
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=87.71 E-value=0.56 Score=47.54 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=30.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (638)
.+.|+++|++| -||+++|+.|.++|.+|++ ++.++
T Consensus 9 ~k~vlItG~s~--gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 9 GKIIIVTGGSS--GIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 46799999998 9999999999999999998 44443
No 307
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=87.68 E-value=0.74 Score=46.71 Aligned_cols=32 Identities=13% Similarity=0.282 Sum_probs=27.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~ 37 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFF 37 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence 46899999995337999999999999999987
No 308
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=87.35 E-value=1.4 Score=46.61 Aligned_cols=105 Identities=13% Similarity=0.172 Sum_probs=66.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEE-EeecCc------CC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTI-WLVGDD------LT 535 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~-w~vg~~------~~ 535 (638)
+|.++|.. .+|.++|+.|.+.|.+|.. |++++.++++++-.. ...+..+.. +.+++| -.+-+. +.
T Consensus 3 ~Ig~IGlG---~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~-~~~s~~~~~--~~aDvVi~~vp~~~~~~~vl~ 76 (296)
T PRK15461 3 AIAFIGLG---QMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGAT-PAASPAQAA--AGAEFVITMLPNGDLVRSVLF 76 (296)
T ss_pred eEEEEeeC---HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCc-ccCCHHHHH--hcCCEEEEecCCHHHHHHHHc
Confidence 68889866 9999999999999999988 888888888765111 111111111 222333 122221 11
Q ss_pred hh-h-hhcCCCCceeecccccCCcCC-------C-CCceeecCCccccCC
Q 006623 536 GK-E-QARAPKGTIFIPYTQIPPRKL-------R-KDCFYHSTPAMIIPP 575 (638)
Q Consensus 536 ~~-~-q~~a~~G~~f~~~~~~~~~~~-------R-~dc~y~~~~a~~~P~ 575 (638)
.. . ...+++|+++++.|.++|... + +.+.|.+.|.+..|.
T Consensus 77 ~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~~ 126 (296)
T PRK15461 77 GENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSD 126 (296)
T ss_pred CcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCHH
Confidence 10 1 123579999999999988722 1 567788888877665
No 309
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=87.28 E-value=1.2 Score=47.99 Aligned_cols=116 Identities=14% Similarity=0.064 Sum_probs=69.0
Q ss_pred ceeeecCCCCcc--eee-ecCChhHH-------HHHHhc-CcCCCcEEEEecccCchhhHHHHHHHHh-ccCc-EEEe--
Q 006623 430 EIYLERQPNKLK--IKV-VDGSSLAA-------AVVVNS-LPKTTAHVLLRGTVTANKVANAVASSLC-QMGI-KVAT-- 494 (638)
Q Consensus 430 ~~~~~k~p~~L~--irv-v~Gnslta-------avv~~~-ip~~~~~V~~~Gatg~~kig~ava~~L~-~~~~-~v~~-- 494 (638)
++.+--+|+ -. ..+ .||+.+|+ ++.... -+++.++|.++|+- ..|++.+++|+ .+++ +|.+
T Consensus 86 g~i~l~d~~-tG~~~ai~~d~~~lT~~RTaa~~~laa~~la~~~~~~v~iiGaG---~qA~~~~~al~~~~~i~~v~V~~ 161 (326)
T TIGR02992 86 GMMVLLSSR-TGLLQALLLDNGYLTDVRTAAAGAVAARHLAREDSSVVAIFGAG---MQARLQLEALTLVRDIRSARIWA 161 (326)
T ss_pred EEEEEEECC-CCCceEEEcCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCC---HHHHHHHHHHHHhCCccEEEEEC
Confidence 355555554 22 344 37777763 122222 25677899999997 78999999998 4674 4666
Q ss_pred cchhhHHHHHhhCCcchhchhhhccc----cccceEEEee----cCcCChhhhhcCCCCceeeccc
Q 006623 495 ICKDDYEKLKLRIPVEAQHNLVLSTS----YAAHKTIWLV----GDDLTGKEQARAPKGTIFIPYT 552 (638)
Q Consensus 495 ~~~~~~~~l~~~~~~~~~~~l~~~~~----~~~~~i~w~v----g~~~~~~~q~~a~~G~~f~~~~ 552 (638)
|+.++.+++.+++..+...+.....+ .+.+++|..+ .-.++++. .++|+++..+.
T Consensus 162 R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p~i~~~~---l~~g~~i~~vg 224 (326)
T TIGR02992 162 RDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETPILHAEW---LEPGQHVTAMG 224 (326)
T ss_pred CCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCcEecHHH---cCCCcEEEeeC
Confidence 99999998888764332222111111 2344555121 12244444 48999888775
No 310
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=87.25 E-value=0.86 Score=44.92 Aligned_cols=41 Identities=20% Similarity=0.345 Sum_probs=32.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
+|.|+|+ | .+|+.||..+++.|.+|++ ++++.+++.++++.
T Consensus 1 ~V~ViGa-G--~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~ 43 (180)
T PF02737_consen 1 KVAVIGA-G--TMGRGIAALFARAGYEVTLYDRSPEALERARKRIE 43 (180)
T ss_dssp EEEEES--S--HHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred CEEEEcC-C--HHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence 5899999 4 9999999999999999999 77776665554433
No 311
>PRK06701 short chain dehydrogenase; Provisional
Probab=87.22 E-value=0.91 Score=47.38 Aligned_cols=30 Identities=23% Similarity=0.317 Sum_probs=27.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 46 ~k~iLItGasg--gIG~~la~~l~~~G~~V~l 75 (290)
T PRK06701 46 GKVALITGGDS--GIGRAVAVLFAKEGADIAI 75 (290)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEE
Confidence 46799999998 9999999999999999988
No 312
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=87.19 E-value=0.72 Score=47.10 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=27.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+++|++|.+-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~ 37 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGI 37 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEE
Confidence 46789999972148999999999999999987
No 313
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=87.17 E-value=0.98 Score=46.55 Aligned_cols=31 Identities=19% Similarity=0.380 Sum_probs=26.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
+.++++|+++..-||+|+|+.|+++|.+|.+
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil 37 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAF 37 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEE
Confidence 5789999983126999999999999999988
No 314
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=86.98 E-value=0.94 Score=53.51 Aligned_cols=44 Identities=16% Similarity=0.219 Sum_probs=37.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++
T Consensus 413 ~gkvvLVTGasg--gIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l 458 (676)
T TIGR02632 413 ARRVAFVTGGAG--GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEI 458 (676)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence 357899999998 9999999999999999988 7777777666554
No 315
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=86.96 E-value=0.72 Score=50.10 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=29.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
..++|+|+|+|| -||+++|+.|.++|.+|+.
T Consensus 20 ~~~~IlVtGgtG--fIG~~l~~~L~~~G~~V~~ 50 (370)
T PLN02695 20 EKLRICITGAGG--FIASHIARRLKAEGHYIIA 50 (370)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHhCCCEEEE
Confidence 567899999999 9999999999999999987
No 316
>PRK06940 short chain dehydrogenase; Provisional
Probab=86.81 E-value=0.93 Score=46.79 Aligned_cols=40 Identities=20% Similarity=0.275 Sum_probs=32.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
+.|+++|+ | -||+++|+.|+ +|.+|.+ |+.++.+++.+++
T Consensus 3 k~~lItGa-~--gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l 44 (275)
T PRK06940 3 EVVVVIGA-G--GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTL 44 (275)
T ss_pred CEEEEECC-C--hHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHH
Confidence 46788887 5 79999999997 7999998 7777777666554
No 317
>PRK08309 short chain dehydrogenase; Provisional
Probab=86.52 E-value=0.95 Score=44.64 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=32.9
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.|+++|+|| -+ .++++.|+++|.+|.+ |++++.+.++.+++
T Consensus 2 ~vlVtGGtG--~g-g~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~ 44 (177)
T PRK08309 2 HALVIGGTG--ML-KRVSLWLCEKGFHVSVIARREVKLENVKREST 44 (177)
T ss_pred EEEEECcCH--HH-HHHHHHHHHCcCEEEEEECCHHHHHHHHHHhh
Confidence 589999986 55 4599999999999988 88888777765543
No 318
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=86.49 E-value=2.6 Score=45.23 Aligned_cols=59 Identities=17% Similarity=0.147 Sum_probs=43.1
Q ss_pred ChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 448 SSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 448 nsltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
+.+||...+... .+....|++.|++| -||.++++.+..+|.+|.. ++.++.+.++++++
T Consensus 142 ~~~TA~~al~~~~~~~~g~~VlV~GaaG--~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lG 204 (348)
T PLN03154 142 AGFTAYAGFYEVCSPKKGDSVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG 204 (348)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcC
Confidence 344555554322 23457899999998 9999999988899999876 77888887765443
No 319
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=86.39 E-value=3 Score=46.64 Aligned_cols=159 Identities=13% Similarity=0.079 Sum_probs=90.0
Q ss_pred eeeecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhh
Q 006623 442 IKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 517 (638)
Q Consensus 442 irvv~Gnsltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~ 517 (638)
-|.=+|.|.. -.+.+.. ....++|+|+|.- .||+.+|+.|...|.+|+. +++.+....... +.. ..++.+
T Consensus 173 n~yg~g~s~~-~~i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~-G~~-v~~lee 246 (406)
T TIGR00936 173 NRYGTGQSTI-DGILRATNLLIAGKTVVVAGYG---WCGKGIAMRARGMGARVIVTEVDPIRALEAAMD-GFR-VMTMEE 246 (406)
T ss_pred cccccchhHH-HHHHHhcCCCCCcCEEEEECCC---HHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhc-CCE-eCCHHH
Confidence 4555676643 3344433 3456799999976 9999999999999999988 455543222211 111 111222
Q ss_pred ccccccceEE-Eeec--CcCChhhhhcCCCCceeecccccCCc--------------CCCCCce---eecCCccc-c-CC
Q 006623 518 STSYAAHKTI-WLVG--DDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCF---YHSTPAMI-I-PP 575 (638)
Q Consensus 518 ~~~~~~~~i~-w~vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~---y~~~~a~~-~-P~ 575 (638)
.. +.+|++ -..| +.++.+....+++|++++-+.+++.+ +.|.-.. .+++-.+. + -+
T Consensus 247 al--~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~ll~~G 324 (406)
T TIGR00936 247 AA--KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIYLLAEG 324 (406)
T ss_pred HH--hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEEEEeCC
Confidence 11 223443 2332 23556677889999999998886541 2332111 11111111 1 12
Q ss_pred CCccccccccccCcchhHHHHHhhhhhhhcCCCC
Q 006623 576 SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL 609 (638)
Q Consensus 576 ~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~~ 609 (638)
.+-|+- |..+.|..+|.-.+|-=.+-+++=+.+
T Consensus 325 rlvNl~-~~~ghp~~vmd~sfa~q~la~~~l~~~ 357 (406)
T TIGR00936 325 RLVNLA-AAEGHPSEVMDMSFANQALAAEYLWKN 357 (406)
T ss_pred ceeccc-CCCCCcceeeCHHHHHHHHHHHHHHhc
Confidence 356676 888999999976665444444444443
No 320
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=86.23 E-value=1 Score=47.73 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=27.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+|+|++| -||+++++.|.++|.+|..
T Consensus 6 ~~~vlVTGatG--fiG~~l~~~L~~~G~~V~~ 35 (340)
T PLN02653 6 RKVALITGITG--QDGSYLTEFLLSKGYEVHG 35 (340)
T ss_pred CCEEEEECCCC--ccHHHHHHHHHHCCCEEEE
Confidence 35799999999 9999999999999999987
No 321
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=86.16 E-value=0.84 Score=49.52 Aligned_cols=38 Identities=16% Similarity=0.132 Sum_probs=34.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~ 501 (638)
+.+.|+|+||+| =||+.|+..|-++|..|.- |+.++-+
T Consensus 5 ~~~~VcVTGAsG--fIgswivk~LL~rGY~V~gtVR~~~~~k 44 (327)
T KOG1502|consen 5 EGKKVCVTGASG--FIGSWIVKLLLSRGYTVRGTVRDPEDEK 44 (327)
T ss_pred CCcEEEEeCCch--HHHHHHHHHHHhCCCEEEEEEcCcchhh
Confidence 678999999999 9999999999999999987 8887743
No 322
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=86.12 E-value=0.61 Score=49.03 Aligned_cols=65 Identities=18% Similarity=0.222 Sum_probs=42.1
Q ss_pred EEecccCchhhHHHHHHHHhccC--cEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEeecCcCChhhhhcCCC
Q 006623 467 LLRGTVTANKVANAVASSLCQMG--IKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGDDLTGKEQARAPK 544 (638)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~--~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~~~q~~a~~ 544 (638)
+|+|++| =||+.+++.|.++| .+|...+...-. .....+.+.. ... ++.||..++++...|-+
T Consensus 1 LVTGgsG--flG~~iv~~Ll~~g~~~~Vr~~d~~~~~--------~~~~~~~~~~----~~~-~~~~Di~d~~~l~~a~~ 65 (280)
T PF01073_consen 1 LVTGGSG--FLGSHIVRQLLERGYIYEVRVLDRSPPP--------KFLKDLQKSG----VKE-YIQGDITDPESLEEALE 65 (280)
T ss_pred CEEcCCc--HHHHHHHHHHHHCCCceEEEEccccccc--------ccchhhhccc----cee-EEEeccccHHHHHHHhc
Confidence 5899999 99999999999999 566552211100 0000111111 012 47899999999999988
Q ss_pred Cc
Q 006623 545 GT 546 (638)
Q Consensus 545 G~ 546 (638)
|+
T Consensus 66 g~ 67 (280)
T PF01073_consen 66 GV 67 (280)
T ss_pred CC
Confidence 86
No 323
>PRK08291 ectoine utilization protein EutC; Validated
Probab=86.05 E-value=1.7 Score=46.91 Aligned_cols=76 Identities=12% Similarity=0.053 Sum_probs=50.0
Q ss_pred ceeeecCCCCcc--eee-ecCChhHHH-----HHHhc--C-cCCCcEEEEecccCchhhHHHHHHHHhc-cC-cEEEe--
Q 006623 430 EIYLERQPNKLK--IKV-VDGSSLAAA-----VVVNS--L-PKTTAHVLLRGTVTANKVANAVASSLCQ-MG-IKVAT-- 494 (638)
Q Consensus 430 ~~~~~k~p~~L~--irv-v~Gnsltaa-----vv~~~--i-p~~~~~V~~~Gatg~~kig~ava~~L~~-~~-~~v~~-- 494 (638)
+..+--+++ .. .-+ .+|+.+|+. ..+.. . +++.++|.++|+- ..|++.+.+|++ ++ .+|.+
T Consensus 89 g~i~l~d~~-tG~~~ai~~d~~~lt~~rT~a~~~~a~~~la~~~~~~v~IiGaG---~~a~~~~~al~~~~~~~~V~v~~ 164 (330)
T PRK08291 89 GLMVVLSAR-TGLVEALLLDNGYLTDVRTAAAGAVAARHLAREDASRAAVIGAG---EQARLQLEALTLVRPIREVRVWA 164 (330)
T ss_pred EEEEEEeCC-CCceEEEEcCCchHHHHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEc
Confidence 345555554 22 233 378777631 22211 2 5567899999997 679999999983 55 45666
Q ss_pred cchhhHHHHHhhCCc
Q 006623 495 ICKDDYEKLKLRIPV 509 (638)
Q Consensus 495 ~~~~~~~~l~~~~~~ 509 (638)
|++++.+++.+++..
T Consensus 165 R~~~~a~~l~~~~~~ 179 (330)
T PRK08291 165 RDAAKAEAYAADLRA 179 (330)
T ss_pred CCHHHHHHHHHHHhh
Confidence 999999999887643
No 324
>PRK08655 prephenate dehydrogenase; Provisional
Probab=85.99 E-value=1.7 Score=48.86 Aligned_cols=86 Identities=15% Similarity=0.180 Sum_probs=52.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEE-EeecCcCCh---hh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTI-WLVGDDLTG---KE 538 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~-w~vg~~~~~---~~ 538 (638)
+|.++|++| .+|+++|+.|.+.|.+|.+ |++++.+++..+.+.....++.+.. ..+++| -.+-..... ++
T Consensus 2 kI~IIGG~G--~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~--~~aDvVIlavp~~~~~~vl~~ 77 (437)
T PRK08655 2 KISIIGGTG--GLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAA--KDADIVIISVPINVTEDVIKE 77 (437)
T ss_pred EEEEEecCC--HHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHh--ccCCEEEEecCHHHHHHHHHH
Confidence 588999999 9999999999999999888 7777766666654432222222211 223443 122111111 11
Q ss_pred -hhcCCCCceeeccccc
Q 006623 539 -QARAPKGTIFIPYTQI 554 (638)
Q Consensus 539 -q~~a~~G~~f~~~~~~ 554 (638)
...+++|+++++++-+
T Consensus 78 l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 78 VAPHVKEGSLLMDVTSV 94 (437)
T ss_pred HHhhCCCCCEEEEcccc
Confidence 1235789999999853
No 325
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=85.96 E-value=1.3 Score=50.24 Aligned_cols=61 Identities=26% Similarity=0.382 Sum_probs=45.5
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
|||.....+.--+..+...+.|+++|+ | .+|+++|..|.+.|.++.+ |+.++.+++.++.+
T Consensus 314 TD~~G~~~~l~~~~~~~~~k~vlIiGa-G--giG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~ 376 (477)
T PRK09310 314 TDGEGLFSLLKQKNIPLNNQHVAIVGA-G--GAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ 376 (477)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 556555555432334445678999996 6 8999999999999999888 77788888876643
No 326
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=85.94 E-value=1.3 Score=44.78 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=35.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+|.++|++| .+|+++|+.|++.|.+|.+ |++++.++++++
T Consensus 2 kI~IIGG~G--~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTG--DQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCC--HHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 588999888 9999999999999999988 888888887664
No 327
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=85.84 E-value=0.89 Score=44.75 Aligned_cols=39 Identities=23% Similarity=0.312 Sum_probs=30.3
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhh
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLR 506 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~ 506 (638)
|+++|++| -||+.+|+.|+++|.+|.+ |+. ++.+.+.++
T Consensus 1 vlItG~~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 42 (239)
T TIGR01830 1 ALVTGASR--GIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEE 42 (239)
T ss_pred CEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHH
Confidence 57999998 9999999999999999888 443 444444433
No 328
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=85.63 E-value=1.3 Score=43.77 Aligned_cols=29 Identities=24% Similarity=0.366 Sum_probs=27.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 k~vlItG~s~--~iG~~la~~l~~~g~~vi~ 31 (245)
T PRK12824 3 KIALVTGAKR--GIGSAIARELLNDGYRVIA 31 (245)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHcCCEEEE
Confidence 4789999998 9999999999999999988
No 329
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=85.60 E-value=2.1 Score=43.33 Aligned_cols=87 Identities=14% Similarity=0.071 Sum_probs=54.5
Q ss_pred cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEec-chhhHHHHHh-hCCcchh--ch----hhhccccccceEEEeec
Q 006623 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI-CKDDYEKLKL-RIPVEAQ--HN----LVLSTSYAAHKTIWLVG 531 (638)
Q Consensus 460 p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~-~~~~~~~l~~-~~~~~~~--~~----l~~~~~~~~~~i~w~vg 531 (638)
+-.-++|+++|... -||+-+|..|.++|-.|++- +..-+..-+. ++..+.. .+ |.+.+ -+|+.+|.++|
T Consensus 59 ~l~GK~vvVIGrS~--iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~-~~ADIVIsAvG 135 (197)
T cd01079 59 RLYGKTITIINRSE--VVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCL-SQSDVVITGVP 135 (197)
T ss_pred CCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHh-hhCCEEEEccC
Confidence 45688999999997 99999999999999999982 1111110000 0111111 12 22222 24555556777
Q ss_pred Cc---CChhhhhcCCCCceeeccc
Q 006623 532 DD---LTGKEQARAPKGTIFIPYT 552 (638)
Q Consensus 532 ~~---~~~~~q~~a~~G~~f~~~~ 552 (638)
+- ++++.. ++|+++||+.
T Consensus 136 ~~~~~i~~d~i---k~GavVIDVG 156 (197)
T cd01079 136 SPNYKVPTELL---KDGAICINFA 156 (197)
T ss_pred CCCCccCHHHc---CCCcEEEEcC
Confidence 53 566666 9999999998
No 330
>PLN00015 protochlorophyllide reductase
Probab=85.52 E-value=0.91 Score=47.73 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=34.3
Q ss_pred EEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCC
Q 006623 467 LLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 467 ~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~ 508 (638)
+++|+++ -||+++|+.|+++| .+|.+ |+.++.+++.+++.
T Consensus 1 lITGas~--GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~ 43 (308)
T PLN00015 1 IITGASS--GLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG 43 (308)
T ss_pred CEeCCCC--hHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc
Confidence 4789997 99999999999999 89888 88888887776653
No 331
>PRK08324 short chain dehydrogenase; Validated
Probab=85.38 E-value=1.1 Score=52.89 Aligned_cols=44 Identities=18% Similarity=0.206 Sum_probs=38.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++.
T Consensus 422 gk~vLVTGasg--gIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~ 467 (681)
T PRK08324 422 GKVALVTGAAG--GIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG 467 (681)
T ss_pred CCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHh
Confidence 47899999998 9999999999999999988 88888887766643
No 332
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=85.36 E-value=1 Score=49.44 Aligned_cols=40 Identities=23% Similarity=0.241 Sum_probs=33.4
Q ss_pred cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006623 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (638)
Q Consensus 458 ~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (638)
+.+....+|+|+|+|| -||+++++.|.++|.+|.. |+.++
T Consensus 55 ~~~~~~~kVLVtGatG--~IG~~l~~~Ll~~G~~V~~l~R~~~~ 96 (390)
T PLN02657 55 SKEPKDVTVLVVGATG--YIGKFVVRELVRRGYNVVAVAREKSG 96 (390)
T ss_pred ccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEEechhh
Confidence 3444567899999999 9999999999999999988 66543
No 333
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=85.20 E-value=4.4 Score=40.64 Aligned_cols=149 Identities=12% Similarity=0.106 Sum_probs=82.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEE--EeecCcCChh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTI--WLVGDDLTGK 537 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~--w~vg~~~~~~ 537 (638)
..++|.+.|.. ++|+++|+.|.+.|.+|+. ++.++.++++++...+.... .+... ...++. -..|..|+++
T Consensus 27 ~gk~v~I~G~G---~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~-~~l~~-~~~Dv~vp~A~~~~I~~~ 101 (200)
T cd01075 27 EGKTVAVQGLG---KVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAP-EEIYS-VDADVFAPCALGGVINDD 101 (200)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcc-hhhcc-ccCCEEEecccccccCHH
Confidence 45789999995 9999999999999999999 77777887776643221111 11111 122343 2346788888
Q ss_pred hhhcCCCCceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhHHHHHhhhhhhhcCCC---CCccch
Q 006623 538 EQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWD---LNECGQ 614 (638)
Q Consensus 538 ~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~~~~~Ac~a~~~v~alEgw~---~~e~G~ 614 (638)
...+++.. .++.-+.-|-...+.|=...+.+++-+|+-+-|-. |++..--.|. +.|.-+
T Consensus 102 ~~~~l~~~-~v~~~AN~~~~~~~~~~~L~~~Gi~~~Pd~~~NaG-----------------Gv~~~~~e~~~~~~~~~~~ 163 (200)
T cd01075 102 TIPQLKAK-AIAGAANNQLADPRHGQMLHERGILYAPDYVVNAG-----------------GLINVADELYGGNEARVLA 163 (200)
T ss_pred HHHHcCCC-EEEECCcCccCCHhHHHHHHHCCCEEeCceeeeCc-----------------CceeehhHHhCCcHHHHHH
Confidence 88776543 34444321111112222223334444554322111 1111111111 223323
Q ss_pred -h---hhhHHHHHHHHHhcCCcc
Q 006623 615 -T---MCDIHQVWHASLRHGFRP 633 (638)
Q Consensus 615 -i---v~~i~~i~~aa~kHGF~p 633 (638)
+ .+.+.+|++.|.++|-.|
T Consensus 164 ~~~~~~~~~~~v~~~a~~~~~~~ 186 (200)
T cd01075 164 KVEAIYDTLLEIFAQAKQDGITT 186 (200)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCH
Confidence 3 588999999999998765
No 334
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=85.18 E-value=4.7 Score=45.18 Aligned_cols=105 Identities=15% Similarity=0.067 Sum_probs=65.8
Q ss_pred eeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhh
Q 006623 442 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 517 (638)
Q Consensus 442 irvv~Gnsltaavv~~~ip--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~ 517 (638)
-|.=+|.|.. -.+++... ...++|+|+|+- .||+.+|+.+...|.+|++ +++.|.+.-+. .+.... ++.+
T Consensus 180 n~~g~g~s~~-~~i~r~t~~~l~GktVvViG~G---~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~~~-~~~e 253 (413)
T cd00401 180 NLYGCRESLI-DGIKRATDVMIAGKVAVVAGYG---DVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYEVM-TMEE 253 (413)
T ss_pred ccchhchhhH-HHHHHhcCCCCCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCEEc-cHHH
Confidence 4444677743 44444443 356789999998 9999999999999999998 66667654433 222111 1112
Q ss_pred ccccccceEE-Eeec--CcCChhhhhcCCCCceeeccccc
Q 006623 518 STSYAAHKTI-WLVG--DDLTGKEQARAPKGTIFIPYTQI 554 (638)
Q Consensus 518 ~~~~~~~~i~-w~vg--~~~~~~~q~~a~~G~~f~~~~~~ 554 (638)
.. +.++++ =..| ..++.+....+++|.+++-+..+
T Consensus 254 ~v--~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~ 291 (413)
T cd00401 254 AV--KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF 291 (413)
T ss_pred HH--cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 11 223443 2333 23555568889999999877753
No 335
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=85.17 E-value=1.3 Score=44.68 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=27.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.|+++|++|.+-||+++|+.|.++|.+|++
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~ 36 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFF 36 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEE
Confidence 36799999994236999999999999999998
No 336
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=85.13 E-value=1.1 Score=45.01 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=30.1
Q ss_pred cccCchhhHHHHHHHHhccCcEEEe--cchhh----HHHHHhhCC
Q 006623 470 GTVTANKVANAVASSLCQMGIKVAT--ICKDD----YEKLKLRIP 508 (638)
Q Consensus 470 Gatg~~kig~ava~~L~~~~~~v~~--~~~~~----~~~l~~~~~ 508 (638)
|++..+-||++||+.|+++|.+|++ |++++ ++++.++.+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~ 45 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG 45 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC
Confidence 4552238999999999999999999 77776 566666544
No 337
>PRK12367 short chain dehydrogenase; Provisional
Probab=85.10 E-value=1.2 Score=45.71 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=29.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 497 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~ 497 (638)
.+.++++|++| -||+++|+.|+++|.+|.+ |++
T Consensus 14 ~k~~lITGas~--gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 14 GKRIGITGASG--ALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEECCc
Confidence 46899999998 9999999999999999987 554
No 338
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=85.02 E-value=1.5 Score=48.49 Aligned_cols=45 Identities=18% Similarity=0.303 Sum_probs=36.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c--chhhHHHHHhhCC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLRIP 508 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~--~~~~~~~l~~~~~ 508 (638)
..+.|+++|++| -||+++|+.|+++|.+|++ + +.++++++.+++.
T Consensus 209 ~g~~vlItGasg--gIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~ 257 (450)
T PRK08261 209 AGKVALVTGAAR--GIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG 257 (450)
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC
Confidence 457899999998 9999999999999999998 3 3456666665543
No 339
>PLN02240 UDP-glucose 4-epimerase
Probab=84.93 E-value=1.4 Score=46.60 Aligned_cols=29 Identities=21% Similarity=0.288 Sum_probs=27.4
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
++|+++|+|| -||+++++.|.++|.+|+.
T Consensus 6 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~ 34 (352)
T PLN02240 6 RTILVTGGAG--YIGSHTVLQLLLAGYKVVV 34 (352)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEE
Confidence 5799999999 9999999999999999987
No 340
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=84.92 E-value=2.1 Score=43.84 Aligned_cols=112 Identities=11% Similarity=0.120 Sum_probs=62.5
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcE---EEe--cc----hhhH-------HHHHhhCCc-chhchhhhccccccc
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK---VAT--IC----KDDY-------EKLKLRIPV-EAQHNLVLSTSYAAH 524 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~---v~~--~~----~~~~-------~~l~~~~~~-~~~~~l~~~~~~~~~ 524 (638)
...+|++.||- ..|++||..|++.|++ +.+ |+ ++|- +++.++.+. +...+|.+.. +.+
T Consensus 24 ~~~rvlvlGAG---gAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~~~l~~~l--~~~ 98 (226)
T cd05311 24 EEVKIVINGAG---AAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTGGTLKEAL--KGA 98 (226)
T ss_pred cCCEEEEECch---HHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCcccCCHHHHH--hcC
Confidence 45789999995 7899999999999985 767 55 3432 334333221 1112332222 223
Q ss_pred eEE-Eee-cCcCChhhhhcCCCCceeecccccCCc-----CC-CCCc-eeecCCccccCCCCccc
Q 006623 525 KTI-WLV-GDDLTGKEQARAPKGTIFIPYTQIPPR-----KL-RKDC-FYHSTPAMIIPPSLSNM 580 (638)
Q Consensus 525 ~i~-w~v-g~~~~~~~q~~a~~G~~f~~~~~~~~~-----~~-R~dc-~y~~~~a~~~P~~~~~~ 580 (638)
+++ -.. .--++++..+.+.++.++.|.+ -|.. +. +..| ++.++..| +|.--+|+
T Consensus 99 dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~G~~~-~~~Q~nn~ 161 (226)
T cd05311 99 DVFIGVSRPGVVKKEMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVATGRSD-FPNQVNNV 161 (226)
T ss_pred CEEEeCCCCCCCCHHHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEeCCCC-Ccccccee
Confidence 443 111 1235677777777776666887 3322 12 2467 46666444 45544444
No 341
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=84.89 E-value=1.5 Score=43.82 Aligned_cols=43 Identities=21% Similarity=0.332 Sum_probs=33.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh--HHHHHhh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLR 506 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~--~~~l~~~ 506 (638)
..+.|+++|+++ -||+++|+.|+++|.+|++ ++.++ .+.+++.
T Consensus 4 ~~~~ilITGas~--GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 50 (251)
T COG1028 4 SGKVALVTGASS--GIGRAIARALAREGARVVVAARRSEEEAAEALAAA 50 (251)
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHH
Confidence 457899999996 9999999999999999776 44443 4444443
No 342
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=84.85 E-value=1.2 Score=44.60 Aligned_cols=30 Identities=27% Similarity=0.353 Sum_probs=28.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 8 ~k~vlItGas~--~iG~~la~~l~~~G~~v~~ 37 (252)
T PRK08220 8 GKTVWVTGAAQ--GIGYAVALAFVEAGAKVIG 37 (252)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 46899999998 9999999999999999998
No 343
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=84.83 E-value=0.99 Score=44.68 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=27.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 5 ~k~~lVtGas~--~iG~~ia~~l~~~G~~v~~ 34 (235)
T PRK06550 5 TKTVLITGAAS--GIGLAQARAFLAQGAQVYG 34 (235)
T ss_pred CCEEEEcCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 46799999998 9999999999999999988
No 344
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=84.77 E-value=2.4 Score=36.44 Aligned_cols=64 Identities=19% Similarity=0.307 Sum_probs=42.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEeecCcCChhhhh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGDDLTGKEQA 540 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~~~q~ 540 (638)
..+++.++|+ | .+|+.++++|++. +.++.+-++ +.+-.. --+++.+.+++..
T Consensus 22 ~~~~v~i~G~-G--~~g~~~a~~l~~~~~~~v~v~~r----------------di~i~~--------~~~~~~~~~~~~~ 74 (86)
T cd05191 22 KGKTVVVLGA-G--EVGKGIAKLLADEGGKKVVLCDR----------------DILVTA--------TPAGVPVLEEATA 74 (86)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcC----------------CEEEEc--------CCCCCCchHHHHH
Confidence 4678999999 7 9999999999987 677777322 111011 1224555554455
Q ss_pred cCCCCceeeccc
Q 006623 541 RAPKGTIFIPYT 552 (638)
Q Consensus 541 ~a~~G~~f~~~~ 552 (638)
...+++++++.+
T Consensus 75 ~~~~~~~v~~~a 86 (86)
T cd05191 75 KINEGAVVIDLA 86 (86)
T ss_pred hcCCCCEEEecC
Confidence 667888777653
No 345
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=84.65 E-value=2.6 Score=44.19 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=60.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEe-ecCc--C-----C
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWL-VGDD--L-----T 535 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~-vg~~--~-----~ 535 (638)
|.++|. | .+|+++|+.|++.|.+|+. |++++.+.+++.-. ....+..+.. +.+++|.+ +-+. + .
T Consensus 2 IgvIG~-G--~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~-~~~~~~~~~~--~~aDivi~~vp~~~~~~~v~~~ 75 (291)
T TIGR01505 2 VGFIGL-G--IMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGA-VTAETARQVT--EQADVIFTMVPDSPQVEEVAFG 75 (291)
T ss_pred EEEEEe-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCC-cccCCHHHHH--hcCCEEEEecCCHHHHHHHHcC
Confidence 678886 4 9999999999999999998 88888888776511 1111111111 22233312 2221 1 1
Q ss_pred hhh-hhcCCCCceeecccccCCc---C----CC-CCceeecCCcc
Q 006623 536 GKE-QARAPKGTIFIPYTQIPPR---K----LR-KDCFYHSTPAM 571 (638)
Q Consensus 536 ~~~-q~~a~~G~~f~~~~~~~~~---~----~R-~dc~y~~~~a~ 571 (638)
+++ ...+++|+++++.|.++|. + ++ +...|.+.|.+
T Consensus 76 ~~~~~~~~~~g~iivd~st~~~~~~~~l~~~l~~~g~~~~~~pv~ 120 (291)
T TIGR01505 76 ENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGIDYLDAPVS 120 (291)
T ss_pred cchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEecCCC
Confidence 111 2346899999999998885 1 22 34446666654
No 346
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=84.60 E-value=3 Score=43.28 Aligned_cols=55 Identities=25% Similarity=0.225 Sum_probs=41.0
Q ss_pred hhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 449 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 449 sltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
-+||+-.+... .+....|++.|++| .+|.++++.+...|.+|.. +++++.+.+++
T Consensus 128 ~~ta~~al~~~~~~~~g~~vlI~ga~g--~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~ 186 (329)
T cd08294 128 GLTAYFGLLEICKPKAGETVVVNGAAG--AVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE 186 (329)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 34554444322 23456899999998 9999999988899999876 78888888866
No 347
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=84.45 E-value=1.6 Score=44.77 Aligned_cols=44 Identities=18% Similarity=0.288 Sum_probs=39.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (638)
.+|+++|.++ -||++.|..+.+.|-+|++ |+++++++.+.+.|.
T Consensus 6 nTiLITGG~s--GIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~ 51 (245)
T COG3967 6 NTILITGGAS--GIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE 51 (245)
T ss_pred cEEEEeCCcc--hhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc
Confidence 3679998874 8999999999999999999 999999999988765
No 348
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=84.44 E-value=3.3 Score=43.82 Aligned_cols=108 Identities=19% Similarity=0.134 Sum_probs=67.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccc-cccceEE-EeecCc--CCh--
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS-YAAHKTI-WLVGDD--LTG-- 536 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~i~-w~vg~~--~~~-- 536 (638)
+|-++|.- .+|+++|+.|.+.|.+|+. |++++.+.+++. ......+..++.+ -.++++| -.+-+. +..
T Consensus 2 ~Ig~IGlG---~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~ 77 (299)
T PRK12490 2 KLGLIGLG---KMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-GITARHSLEELVSKLEAPRTIWVMVPAGEVTESVI 77 (299)
T ss_pred EEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHH
Confidence 47888854 9999999999999999988 888888888654 2222222222211 1112333 122221 110
Q ss_pred hhh-hcCCCCceeecccccCCc-------CC-CCCceeecCCccccCCC
Q 006623 537 KEQ-ARAPKGTIFIPYTQIPPR-------KL-RKDCFYHSTPAMIIPPS 576 (638)
Q Consensus 537 ~~q-~~a~~G~~f~~~~~~~~~-------~~-R~dc~y~~~~a~~~P~~ 576 (638)
++. ..+++|.++|+.|.++|. ++ ++.+.|.+.|.+--|..
T Consensus 78 ~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vdapV~G~~~~ 126 (299)
T PRK12490 78 KDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVWG 126 (299)
T ss_pred HHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEeCCCCCCHHH
Confidence 122 235789999999988875 11 26788999888866543
No 349
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=84.38 E-value=1.8 Score=49.82 Aligned_cols=44 Identities=14% Similarity=0.122 Sum_probs=38.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
..+.|+++|+ | -+|+|+|..|.+.|.+|.+ |+.++.+++.+++.
T Consensus 378 ~~k~vlIlGa-G--GagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~ 423 (529)
T PLN02520 378 AGKLFVVIGA-G--GAGKALAYGAKEKGARVVIANRTYERAKELADAVG 423 (529)
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence 4578999999 4 7899999999999999888 88889999887764
No 350
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=84.28 E-value=0.79 Score=46.66 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=28.3
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~ 499 (638)
|+++|++| -||+++++.|.++|.+|.. |+.+.
T Consensus 1 vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~ 34 (292)
T TIGR01777 1 ILITGGTG--FIGRALTQRLTKDGHEVTILTRSPPA 34 (292)
T ss_pred CEEEcccc--hhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence 68999999 9999999999999999987 65554
No 351
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=84.25 E-value=7.4 Score=41.78 Aligned_cols=91 Identities=20% Similarity=0.280 Sum_probs=64.3
Q ss_pred HHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006623 406 ADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 456 (638)
Q Consensus 406 A~k~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 456 (638)
|.++|++++.|+. ++++|. |.+..-+.+.|+|+ ..++.|+.+.+ +=..++.
T Consensus 61 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 140 (304)
T TIGR00658 61 AYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVINGLTDLFHPCQALADLLTII 140 (304)
T ss_pred HHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 4569999999964 334444 35566678889887 35677887643 1134555
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchh
Q 006623 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 498 (638)
Q Consensus 457 ~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~ 498 (638)
+..+. +..+|.++|..+ .+.+..+.+|.+-|++|.+-.++
T Consensus 141 e~~g~l~g~~v~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~ 181 (304)
T TIGR00658 141 EHFGKLKGVKVVYVGDGN--NVCNSLMLAGAKLGMDVVVATPE 181 (304)
T ss_pred HHhCCCCCcEEEEEeCCC--chHHHHHHHHHHcCCEEEEECCc
Confidence 55432 456899999986 89999999999999999993333
No 352
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=83.90 E-value=1.7 Score=42.75 Aligned_cols=27 Identities=22% Similarity=0.397 Sum_probs=25.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
|+++|||| =||+++++.|.++|.+|+.
T Consensus 1 IlI~GatG--~iG~~l~~~l~~~g~~v~~ 27 (236)
T PF01370_consen 1 ILITGATG--FIGSALVRQLLKKGHEVIV 27 (236)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTTEEEE
T ss_pred EEEEccCC--HHHHHHHHHHHHcCCcccc
Confidence 78999999 9999999999999999664
No 353
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=83.76 E-value=2.9 Score=40.49 Aligned_cols=88 Identities=15% Similarity=0.144 Sum_probs=57.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhc-------------------------hh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH-------------------------NL 515 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~-------------------------~l 515 (638)
.++|+|+|+- .+|...++.|.+.|.+|+. .+.++.++++..-...... +|
T Consensus 20 p~~vvv~G~G---~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 96 (168)
T PF01262_consen 20 PAKVVVTGAG---RVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF 96 (168)
T ss_dssp T-EEEEESTS---HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred CeEEEEECCC---HHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence 4688999965 9999999999999999999 5555666555442221111 11
Q ss_pred hhccccccceEEEee-----c----CcCChhhhhcCCCCceeecccccCCc
Q 006623 516 VLSTSYAAHKTIWLV-----G----DDLTGKEQARAPKGTIFIPYTQIPPR 557 (638)
Q Consensus 516 ~~~~~~~~~~i~w~v-----g----~~~~~~~q~~a~~G~~f~~~~~~~~~ 557 (638)
.+. .+.++++ +. | ..++.++.++++||.+++|+| .+.-
T Consensus 97 ~~~--i~~~d~v-I~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis-~D~g 143 (168)
T PF01262_consen 97 AEF--IAPADIV-IGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS-CDQG 143 (168)
T ss_dssp HHH--HHH-SEE-EEHHHBTTSS---SBEHHHHHTSSTTEEEEETT-GGGT
T ss_pred HHH--HhhCcEE-eeecccCCCCCCEEEEhHHhhccCCCceEEEEE-ecCC
Confidence 110 1333443 21 2 468999999999999999999 5554
No 354
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=83.47 E-value=2.1 Score=43.41 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=35.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
....|++.|++| .+|.++++.+...|.++.+ +++++.+.+++
T Consensus 139 ~~~~vlv~g~~~--~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 182 (323)
T cd05276 139 AGETVLIHGGAS--GVGTAAIQLAKALGARVIATAGSEEKLEACRA 182 (323)
T ss_pred CCCEEEEEcCcC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 356899999997 9999999999999999887 67777777643
No 355
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=83.01 E-value=2.4 Score=44.88 Aligned_cols=103 Identities=15% Similarity=0.161 Sum_probs=63.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcch--hchhhhccccccceEEEee-cCc-CCh--
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA--QHNLVLSTSYAAHKTIWLV-GDD-LTG-- 536 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~--~~~l~~~~~~~~~~i~w~v-g~~-~~~-- 536 (638)
+|.++|. | .+|.++|+.|.+.|.+|.+ |++++.++++++-.... ...+++.. +.+++|++. -+. +++
T Consensus 2 ~Ig~IGl-G--~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~--~~~dvIi~~vp~~~~~~v~ 76 (298)
T TIGR00872 2 QLGLIGL-G--RMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRL--SAPRVVWVMVPHGIVDAVL 76 (298)
T ss_pred EEEEEcc-h--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhc--CCCCEEEEEcCchHHHHHH
Confidence 5889996 5 9999999999999999998 89999998887522111 11222211 222343222 111 111
Q ss_pred hh-hhcCCCCceeecccccCCcCC--------CCCceeecCCccc
Q 006623 537 KE-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMI 572 (638)
Q Consensus 537 ~~-q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~ 572 (638)
++ ....++|.++++.+-.+|... ++.+.|.+.|++-
T Consensus 77 ~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vda~vsG 121 (298)
T TIGR00872 77 EELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSG 121 (298)
T ss_pred HHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEecCCCC
Confidence 11 223578999999987665511 1466788877664
No 356
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=82.90 E-value=2.5 Score=45.46 Aligned_cols=148 Identities=14% Similarity=0.131 Sum_probs=90.7
Q ss_pred cceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc--chhchh
Q 006623 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EAQHNL 515 (638)
Q Consensus 440 L~irvv~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~--~~~~~l 515 (638)
.+-|++.+.+. ....+++...++|=++|=- -.|+++|.-|-+.|.+|++ |++++.+.+|+.=.+ ++-..+
T Consensus 15 ~~~~~~~~~~~---~~s~~~~~s~~~iGFIGLG---~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeV 88 (327)
T KOG0409|consen 15 FSRRLVKASET---AMSSRITPSKTRIGFIGLG---NMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEV 88 (327)
T ss_pred hcccccccccc---cccccCCcccceeeEEeec---cchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHH
Confidence 45666666666 5566666667788888754 7899999999999999999 999999999877222 222222
Q ss_pred hhccccccceEEEeecCcCChhhhhc--------CCCCcee-ecccccCCc-------CCC-CCceeecCCccc-cCCCC
Q 006623 516 VLSTSYAAHKTIWLVGDDLTGKEQAR--------APKGTIF-IPYTQIPPR-------KLR-KDCFYHSTPAMI-IPPSL 577 (638)
Q Consensus 516 ~~~~~~~~~~i~w~vg~~~~~~~q~~--------a~~G~~f-~~~~~~~~~-------~~R-~dc~y~~~~a~~-~P~~~ 577 (638)
++..++ |+=.|++....+|..- .++|-.. +|-|-++|. +.+ +||.|.+.|+-- +++.=
T Consensus 89 ae~sDv----vitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vDAPVSGg~~~A~ 164 (327)
T KOG0409|consen 89 AEDSDV----VITMVPNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVDAPVSGGVKGAE 164 (327)
T ss_pred HhhcCE----EEEEcCChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEeccccCCchhhh
Confidence 222211 1124555555444322 2344444 888888887 233 999999999742 33322
Q ss_pred ccccccccccCcchhHHHHH
Q 006623 578 SNMHSCENWLGRRVMSAWRI 597 (638)
Q Consensus 578 ~~~~~~e~~~p~~~~~Ac~a 597 (638)
++.=+.=-+=++....||..
T Consensus 165 ~G~LtimagGde~~~~~~~~ 184 (327)
T KOG0409|consen 165 EGTLTIMAGGDEALFEAASP 184 (327)
T ss_pred cCeEEEEecCcHHHHHHHHH
Confidence 22222223334555555653
No 357
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=82.83 E-value=2.8 Score=45.44 Aligned_cols=86 Identities=21% Similarity=0.115 Sum_probs=53.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEee-------cCcCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV-------GDDLT 535 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v-------g~~~~ 535 (638)
.++|-++|.- .||+++|..|..-|.+|+..++..-++...........+|.+.. +.+|++.+. -..|+
T Consensus 142 gkTvGIiG~G---~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL--~~sDiv~lh~PlT~eT~g~i~ 216 (324)
T COG0111 142 GKTVGIIGLG---RIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELL--AEADILTLHLPLTPETRGLIN 216 (324)
T ss_pred CCEEEEECCC---HHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHH--hhCCEEEEcCCCCcchhcccC
Confidence 5688889887 99999999999999999993332222111111111112222222 111222010 24567
Q ss_pred hhhhhcCCCCceeecccc
Q 006623 536 GKEQARAPKGTIFIPYTQ 553 (638)
Q Consensus 536 ~~~q~~a~~G~~f~~~~~ 553 (638)
.++..+||+|++||-++|
T Consensus 217 ~~~~a~MK~gailIN~aR 234 (324)
T COG0111 217 AEELAKMKPGAILINAAR 234 (324)
T ss_pred HHHHhhCCCCeEEEECCC
Confidence 889999999999999999
No 358
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=82.67 E-value=3 Score=35.95 Aligned_cols=43 Identities=19% Similarity=0.209 Sum_probs=36.8
Q ss_pred EEEEecccCchhhHHHHHHHHhccC---cEEEe---cchhhHHHHHhhCCcc
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMG---IKVAT---ICKDDYEKLKLRIPVE 510 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~---~~v~~---~~~~~~~~l~~~~~~~ 510 (638)
+|.++|+- ++|.|+++.|.+.| .+|.+ |++|+.++++++.+.+
T Consensus 1 kI~iIG~G---~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~ 49 (96)
T PF03807_consen 1 KIGIIGAG---NMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQ 49 (96)
T ss_dssp EEEEESTS---HHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTE
T ss_pred CEEEECCC---HHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccc
Confidence 46778765 99999999999999 89885 9999999999997743
No 359
>PLN02996 fatty acyl-CoA reductase
Probab=82.64 E-value=2.3 Score=48.39 Aligned_cols=25 Identities=12% Similarity=0.272 Sum_probs=22.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQM 488 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~ 488 (638)
+.+.|+|+|+|| -||++++..|.+.
T Consensus 10 ~~k~VlvTGaTG--FlG~~ll~~LL~~ 34 (491)
T PLN02996 10 ENKTILVTGATG--FLAKIFVEKILRV 34 (491)
T ss_pred CCCeEEEeCCCc--HHHHHHHHHHHhh
Confidence 456899999999 9999999998864
No 360
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=82.61 E-value=1.1 Score=49.14 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=32.6
Q ss_pred hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecch
Q 006623 457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (638)
Q Consensus 457 ~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~ 497 (638)
+.+++...+|.++|.+| .+|..+|+.|.+.|..|.+.+.
T Consensus 92 ~~~~~~~~~I~IiGG~G--lmG~slA~~l~~~G~~V~~~d~ 130 (374)
T PRK11199 92 KTLNPDLRPVVIVGGKG--QLGRLFAKMLTLSGYQVRILEQ 130 (374)
T ss_pred cccCcccceEEEEcCCC--hhhHHHHHHHHHCCCeEEEeCC
Confidence 34445667899999999 9999999999999999999433
No 361
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=82.61 E-value=3.4 Score=45.62 Aligned_cols=39 Identities=18% Similarity=0.306 Sum_probs=34.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+|+++|+ | .+|+++|+.|+++|.+|.+ +++++.++++++
T Consensus 2 ~viIiG~-G--~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~ 42 (453)
T PRK09496 2 KIIIVGA-G--QVGYTLAENLSGENNDVTVIDTDEERLRRLQDR 42 (453)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh
Confidence 6899998 6 9999999999999999998 788888888653
No 362
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=82.21 E-value=2.1 Score=45.50 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
..+.++++|+...+-||+|+|+.|+++|-+|.+
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv 39 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILV 39 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEE
Confidence 456789999951148999999999999999999
No 363
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=81.99 E-value=3.1 Score=43.12 Aligned_cols=54 Identities=26% Similarity=0.328 Sum_probs=41.4
Q ss_pred hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 450 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 450 ltaavv~~~ip-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
+||+..++.+. ++...|++.|++| .+|.++++.+.++|.+|.. +++++.+.+++
T Consensus 129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 189 (326)
T cd08289 129 FTAALSIHRLEENGLTPEQGPVLVTGATG--GVGSLAVSILAKLGYEVVASTGKADAADYLKK 189 (326)
T ss_pred HHHHHHHHHHHhcCCCCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH
Confidence 34555554432 2456899999998 9999999999999999887 78888887754
No 364
>PLN00016 RNA-binding protein; Provisional
Probab=81.72 E-value=1.4 Score=47.77 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=32.7
Q ss_pred cCcCCCcEEEEe----cccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006623 458 SLPKTTAHVLLR----GTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (638)
Q Consensus 458 ~ip~~~~~V~~~----Gatg~~kig~ava~~L~~~~~~v~~--~~~~ 498 (638)
.-....++|+|+ |+|| -||+.+++.|.++|.+|+. |+.+
T Consensus 47 ~~~~~~~~VLVt~~~~GatG--~iG~~lv~~L~~~G~~V~~l~R~~~ 91 (378)
T PLN00016 47 AAAVEKKKVLIVNTNSGGHA--FIGFYLAKELVKAGHEVTLFTRGKE 91 (378)
T ss_pred hcccccceEEEEeccCCCce--eEhHHHHHHHHHCCCEEEEEecCCc
Confidence 333456789999 9999 9999999999999999998 6554
No 365
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=81.01 E-value=4.7 Score=41.22 Aligned_cols=53 Identities=19% Similarity=0.135 Sum_probs=39.9
Q ss_pred hHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 450 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 450 ltaavv~~~ip--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
+||+..++.+- +....|++.|++| .+|.++++.+..+|.+|.. +++++.+.++
T Consensus 128 ~ta~~~l~~~~~~~~g~~vlV~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 184 (320)
T cd08243 128 YTAWGSLFRSLGLQPGDTLLIRGGTS--SVGLAALKLAKALGATVTATTRSPERAALLK 184 (320)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 44555554442 2346999999998 9999999999999999877 6777777664
No 366
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=80.67 E-value=1.8 Score=39.67 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=26.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKD 498 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~ 498 (638)
+.++++|++| -||+++++.|+++|. .|.+ |+++
T Consensus 1 ~~~li~Ga~~--~iG~~~~~~l~~~g~~~v~~~~r~~~ 36 (180)
T smart00822 1 GTYLITGGLG--GLGLELARWLAERGARHLVLLSRSGP 36 (180)
T ss_pred CEEEEEcCCC--hHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence 3689999998 999999999999886 4555 5443
No 367
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=80.56 E-value=1.7 Score=45.61 Aligned_cols=28 Identities=25% Similarity=0.300 Sum_probs=26.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
+|+|+|+|| -||+++|+.|.++|.+|++
T Consensus 2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~ 29 (338)
T PRK10675 2 RVLVTGGSG--YIGSHTCVQLLQNGHDVVI 29 (338)
T ss_pred eEEEECCCC--hHHHHHHHHHHHCCCeEEE
Confidence 589999999 9999999999999999987
No 368
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=80.27 E-value=3.4 Score=47.56 Aligned_cols=41 Identities=24% Similarity=0.395 Sum_probs=36.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+.+|.+||.. ++|+.+|+.|.++|.++++ .|+|+.++++++
T Consensus 417 ~~hiiI~G~G---~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~ 459 (558)
T PRK10669 417 CNHALLVGYG---RVGSLLGEKLLAAGIPLVVIETSRTRVDELRER 459 (558)
T ss_pred CCCEEEECCC---hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC
Confidence 6789999998 9999999999999999988 778888888654
No 369
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=80.21 E-value=4 Score=41.74 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=32.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (638)
.++.++|+. .+|+.+|+-|.++|..|++ +++++.++
T Consensus 1 m~iiIiG~G---~vG~~va~~L~~~g~~Vv~Id~d~~~~~~ 38 (225)
T COG0569 1 MKIIIIGAG---RVGRSVARELSEEGHNVVLIDRDEERVEE 38 (225)
T ss_pred CEEEEECCc---HHHHHHHHHHHhCCCceEEEEcCHHHHHH
Confidence 368899998 9999999999999999999 88888776
No 370
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=80.17 E-value=2.4 Score=46.18 Aligned_cols=39 Identities=26% Similarity=0.444 Sum_probs=31.2
Q ss_pred EEEecccCchhhHHHHHHHHhccC-c-EEEe--cchhhHHHHHhhC
Q 006623 466 VLLRGTVTANKVANAVASSLCQMG-I-KVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~-~-~v~~--~~~~~~~~l~~~~ 507 (638)
|++.|+ | .+|+++|+.|.+++ . +|++ |+.++.+++.+++
T Consensus 1 IlvlG~-G--~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~ 43 (386)
T PF03435_consen 1 ILVLGA-G--RVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL 43 (386)
T ss_dssp EEEE---S--HHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--
T ss_pred CEEEcC-c--HHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc
Confidence 689999 9 99999999999776 4 7888 9999999998764
No 371
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=80.16 E-value=1.8 Score=47.19 Aligned_cols=49 Identities=18% Similarity=0.249 Sum_probs=44.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhc
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH 513 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~ 513 (638)
.....+.|||| =.|.-||++||++|.+-.| ||.++++.|..++..+.+.
T Consensus 6 e~d~iiYGAtG--y~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~ 56 (382)
T COG3268 6 EYDIIIYGATG--YAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAV 56 (382)
T ss_pred ceeEEEEcccc--chhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccc
Confidence 45788999999 9999999999999999988 9999999999998877654
No 372
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=79.53 E-value=5.9 Score=41.93 Aligned_cols=107 Identities=14% Similarity=0.059 Sum_probs=65.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhcc-ccccceEE-EeecCc-C-C---
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAAHKTI-WLVGDD-L-T--- 535 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~~~i~-w~vg~~-~-~--- 535 (638)
+|.++|.- .+|+++|+.|.+.|.+|.+ |++++.+++++. +.....+..++. ....+++| ..+-+. . .
T Consensus 2 ~Ig~IGlG---~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~ 77 (301)
T PRK09599 2 QLGMIGLG---RMGGNMARRLLRGGHEVVGYDRNPEAVEALAEE-GATGADSLEELVAKLPAPRVVWLMVPAGEITDATI 77 (301)
T ss_pred EEEEEccc---HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHH
Confidence 57888855 9999999999999999998 888888887653 211111211111 01112233 233221 1 1
Q ss_pred hhhhhcCCCCceeecccccCCc-------CCC-CCceeecCCccccCC
Q 006623 536 GKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP 575 (638)
Q Consensus 536 ~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~ 575 (638)
++-...+++|.++++.+..+|. .++ +.+.|.+-|.+--|.
T Consensus 78 ~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~dapvsG~~~ 125 (301)
T PRK09599 78 DELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVDVGTSGGVW 125 (301)
T ss_pred HHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEeCCCCcCHH
Confidence 1112345789999999987775 222 677888877765444
No 373
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=79.14 E-value=2.7 Score=44.77 Aligned_cols=34 Identities=18% Similarity=0.230 Sum_probs=30.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~ 501 (638)
|+++|+|| -||++++..|++.|-+|++ |+..+-+
T Consensus 1 IliTGgTG--lIG~~L~~~L~~~gh~v~iltR~~~~~~ 36 (297)
T COG1090 1 ILITGGTG--LIGRALTARLRKGGHQVTILTRRPPKAS 36 (297)
T ss_pred CeEecccc--chhHHHHHHHHhCCCeEEEEEcCCcchh
Confidence 57999999 9999999999999999999 7666655
No 374
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=79.09 E-value=1.9 Score=44.41 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=26.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
+|+++|++| .||+++++.|.++|.+|.+
T Consensus 1 kvlV~GatG--~iG~~l~~~l~~~g~~V~~ 28 (328)
T TIGR01179 1 KILVTGGAG--YIGSHTVRQLLESGHEVVV 28 (328)
T ss_pred CEEEeCCCC--HHHHHHHHHHHhCCCeEEE
Confidence 489999999 9999999999999999987
No 375
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=78.87 E-value=2.6 Score=47.16 Aligned_cols=62 Identities=27% Similarity=0.289 Sum_probs=45.8
Q ss_pred eeeecCChhHHHHHH-hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 442 IKVVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 442 irvv~Gnsltaavv~-~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
++.++|.+--+++=. +.-..+...|+|+|||| ++|+=|.+.|-++|..|.. |++++-+++-.
T Consensus 57 ~~~~~~~~~e~~v~~~~~~~~~~~~VlVvGatG--~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 57 ISPVTGTTSEAEVSPPNNNSKKPTTVLVVGATG--KVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCccccccceeeeccCCCCCCCCCeEEEecCCC--chhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 555555555443331 22234677999999999 9999999999999988887 88888776655
No 376
>PLN02206 UDP-glucuronate decarboxylase
Probab=78.65 E-value=2.3 Score=47.78 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=28.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.++|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 119 ~~kILVTGatG--fIGs~Lv~~Ll~~G~~V~~ 148 (442)
T PLN02206 119 GLRVVVTGGAG--FVGSHLVDRLMARGDSVIV 148 (442)
T ss_pred CCEEEEECccc--HHHHHHHHHHHHCcCEEEE
Confidence 46899999999 9999999999999999987
No 377
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=78.52 E-value=8.8 Score=41.81 Aligned_cols=92 Identities=15% Similarity=0.188 Sum_probs=66.5
Q ss_pred HHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006623 406 ADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 456 (638)
Q Consensus 406 A~k~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 456 (638)
+.++|.+++.|+. ++++|. |.+..-+.+.|+|+ ...|+|+.|.+ +=..++.
T Consensus 68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 147 (334)
T PRK01713 68 AYDQGAQVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQSIVNELAEYAGVPVFNGLTDEFHPTQMLADVLTMI 147 (334)
T ss_pred HHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEEcCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 3689999999974 344554 35556677888886 36789999866 1246666
Q ss_pred hcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchh
Q 006623 457 NSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 498 (638)
Q Consensus 457 ~~ip--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~ 498 (638)
+... -+..+|.++|... +.+++..+..+++-|.+|.+-.++
T Consensus 148 e~~g~~l~gl~ia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~ 190 (334)
T PRK01713 148 ENCDKPLSEISYVYIGDAR-NNMGNSLLLIGAKLGMDVRICAPK 190 (334)
T ss_pred HHcCCCcCCcEEEEECCCc-cCHHHHHHHHHHHcCCEEEEECCc
Confidence 6543 2456999999973 369999999999999999993333
No 378
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=78.51 E-value=6.1 Score=43.64 Aligned_cols=154 Identities=14% Similarity=0.081 Sum_probs=97.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEE-Eee--cCcCChhh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTI-WLV--GDDLTGKE 538 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~-w~v--g~~~~~~~ 538 (638)
.-+.|+|+|=- .+|+-||..|...|-+|.+..-|.-..||.....=.-..+.++. ..|+|+ =.- -|.|+.|+
T Consensus 208 aGK~vVV~GYG---~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa--~~gDifiT~TGnkdVi~~eh 282 (420)
T COG0499 208 AGKNVVVAGYG---WVGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAA--KTGDIFVTATGNKDVIRKEH 282 (420)
T ss_pred cCceEEEeccc---ccchHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhh--hcCCEEEEccCCcCccCHHH
Confidence 45677777765 99999999999999999995556666665543221111111221 122332 112 36799999
Q ss_pred hhcCCCCceeecccccCCc--------------CCCCCceeecCCc---c--ccCCCCccccccccccCcchhHHHHHhh
Q 006623 539 QARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---M--IIPPSLSNMHSCENWLGRRVMSAWRIAG 599 (638)
Q Consensus 539 q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~--~~P~~~~~~~~~e~~~p~~~~~Ac~a~~ 599 (638)
.++|+.|++.|-.-.|+-+ +.|+.+.-.+.|. + .--+-+-|+. |--+.|..+|+..+|--
T Consensus 283 ~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~llaeGRLvNLa-~a~GHPs~VMd~SFanQ 361 (420)
T COG0499 283 FEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLAEGRLVNLA-AATGHPSEVMDMSFANQ 361 (420)
T ss_pred HHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEecceeeeec-cCCCCcHHHhhhhHHHH
Confidence 9999999999977654322 2333333222221 1 1222377788 88999999999999999
Q ss_pred hhhhhcCCCCC---ccch--hhhhHHH
Q 006623 600 IIHALEGWDLN---ECGQ--TMCDIHQ 621 (638)
Q Consensus 600 ~v~alEgw~~~---e~G~--iv~~i~~ 621 (638)
.+.+.|=|..+ |-|= +...+|+
T Consensus 362 aLa~~~L~~n~~~~~~~Vy~lP~~lD~ 388 (420)
T COG0499 362 ALAQIYLVKNHGKLEPGVYRLPKELDE 388 (420)
T ss_pred HHHHHHHHhcccccCCceeeCcHHHHH
Confidence 98888877766 4443 2355554
No 379
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=78.38 E-value=5.3 Score=42.16 Aligned_cols=57 Identities=19% Similarity=0.169 Sum_probs=43.0
Q ss_pred hHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006623 450 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 450 ltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~ 508 (638)
+||+..+... .+....|++.|++| -||.++++.+..+|.+|.. ++.++.+.++++++
T Consensus 137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G--~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lG 197 (338)
T cd08295 137 LTAYAGFYEVCKPKKGETVFVSAASG--AVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLG 197 (338)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC
Confidence 4555555332 23457899999998 9999999988899999876 78888888876433
No 380
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=78.35 E-value=3.9 Score=41.90 Aligned_cols=87 Identities=14% Similarity=0.048 Sum_probs=54.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhch-hhhccccccceEE-EeecCcCChhh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN-LVLSTSYAAHKTI-WLVGDDLTGKE 538 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~-l~~~~~~~~~~i~-w~vg~~~~~~~ 538 (638)
...|++.|++| .+|.++++.+...|.+|.. +++++.+.+++ ++...... ..+.+. +.-+++ =.+|....++-
T Consensus 133 ~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~-~~~d~vl~~~g~~~~~~~ 208 (305)
T cd08270 133 GRRVLVTGASG--GVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAEVVVGGSELSG-APVDLVVDSVGGPQLARA 208 (305)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEeccccccC-CCceEEEECCCcHHHHHH
Confidence 67999999998 9999999999999999877 77788887765 43221100 001111 111332 22233333444
Q ss_pred hhcCCCCceeecccc
Q 006623 539 QARAPKGTIFIPYTQ 553 (638)
Q Consensus 539 q~~a~~G~~f~~~~~ 553 (638)
.+.+++|-+++.+..
T Consensus 209 ~~~l~~~G~~v~~g~ 223 (305)
T cd08270 209 LELLAPGGTVVSVGS 223 (305)
T ss_pred HHHhcCCCEEEEEec
Confidence 556777777887763
No 381
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=78.31 E-value=3.6 Score=42.07 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=35.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (638)
.+-+.++|+.. -||+|||..|+++|.+|.. ++.+.-+.-...++.
T Consensus 14 sk~~~vtGg~s--GIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g 60 (256)
T KOG1200|consen 14 SKVAAVTGGSS--GIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG 60 (256)
T ss_pred cceeEEecCCc--hHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC
Confidence 45677889884 9999999999999999999 666666666555554
No 382
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=78.26 E-value=2 Score=45.61 Aligned_cols=29 Identities=10% Similarity=0.184 Sum_probs=25.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
++|+|+|+|| -||+++|+.|+++|.+++.
T Consensus 2 ~~vlVtGatG--fIG~~l~~~L~~~g~~~v~ 30 (355)
T PRK10217 2 RKILITGGAG--FIGSALVRYIINETSDAVV 30 (355)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHHcCCCEEE
Confidence 5799999999 9999999999999977543
No 383
>PLN02928 oxidoreductase family protein
Probab=78.02 E-value=5.3 Score=43.56 Aligned_cols=91 Identities=11% Similarity=0.121 Sum_probs=56.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH--H--Hh----hCCc--chhchhhhccccccceEEEe
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK--L--KL----RIPV--EAQHNLVLSTSYAAHKTIWL 529 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~--l--~~----~~~~--~~~~~l~~~~~~~~~~i~w~ 529 (638)
..++|.++|.- .||+++|+.|...|.+|+. |+.++-.. + +. ++.. ....+|.+.. +.+|+|.+
T Consensus 158 ~gktvGIiG~G---~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell--~~aDiVvl 232 (347)
T PLN02928 158 FGKTVFILGYG---AIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFA--GEADIVVL 232 (347)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHH--hhCCEEEE
Confidence 35789999985 9999999999999999988 33221110 0 00 0000 0112222222 22344412
Q ss_pred e-------cCcCChhhhhcCCCCceeecccc---cCCc
Q 006623 530 V-------GDDLTGKEQARAPKGTIFIPYTQ---IPPR 557 (638)
Q Consensus 530 v-------g~~~~~~~q~~a~~G~~f~~~~~---~~~~ 557 (638)
. -..|+.++..+|++|+++|.++| |+.+
T Consensus 233 ~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~ 270 (347)
T PLN02928 233 CCTLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYD 270 (347)
T ss_pred CCCCChHhhcccCHHHHhcCCCCeEEEECCCccccCHH
Confidence 1 24577889999999999999999 5544
No 384
>PRK07574 formate dehydrogenase; Provisional
Probab=78.01 E-value=6.5 Score=43.70 Aligned_cols=101 Identities=11% Similarity=0.152 Sum_probs=62.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEee-------cC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV-------GD 532 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v-------g~ 532 (638)
..++|.++|.- .||+++|+.|...|.+|.. |+... ....++.+......|.++. +.+|+|.+. -.
T Consensus 191 ~gktVGIvG~G---~IG~~vA~~l~~fG~~V~~~dr~~~~-~~~~~~~g~~~~~~l~ell--~~aDvV~l~lPlt~~T~~ 264 (385)
T PRK07574 191 EGMTVGIVGAG---RIGLAVLRRLKPFDVKLHYTDRHRLP-EEVEQELGLTYHVSFDSLV--SVCDVVTIHCPLHPETEH 264 (385)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCCc-hhhHhhcCceecCCHHHHh--hcCCEEEEcCCCCHHHHH
Confidence 35679999985 9999999999999999988 33211 1122222222222333332 223444121 23
Q ss_pred cCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006623 533 DLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 568 (638)
Q Consensus 533 ~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 568 (638)
.++.+....+++|+.+|.++| ++.+ +++ -|++..+-
T Consensus 265 li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i~GAaLDV~~~EP 315 (385)
T PRK07574 265 LFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDVWFPQP 315 (385)
T ss_pred HhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCccEEEEecCCCCC
Confidence 356678899999999999999 4333 344 57777664
No 385
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=77.97 E-value=4.2 Score=36.10 Aligned_cols=38 Identities=24% Similarity=0.332 Sum_probs=31.8
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
|+++|.. .+|+.+++.|-+.+.+|++ +++++.++++++
T Consensus 1 vvI~G~g---~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~ 40 (116)
T PF02254_consen 1 VVIIGYG---RIGREIAEQLKEGGIDVVVIDRDPERVEELREE 40 (116)
T ss_dssp EEEES-S---HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT
T ss_pred eEEEcCC---HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc
Confidence 6789987 9999999999998888888 888888877665
No 386
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=77.89 E-value=7.2 Score=40.54 Aligned_cols=42 Identities=17% Similarity=0.096 Sum_probs=34.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
....|++.|++| .+|.++++.+.+.|.+|.. +++++.+.+++
T Consensus 139 ~~~~vlI~ga~g--~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 182 (329)
T cd08250 139 SGETVLVTAAAG--GTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS 182 (329)
T ss_pred CCCEEEEEeCcc--HHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH
Confidence 356899999998 9999999988899999877 67777777643
No 387
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=77.71 E-value=2.7 Score=47.15 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=28.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
...+|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 119 ~~mkILVTGatG--FIGs~Lv~~Ll~~G~~V~~ 149 (436)
T PLN02166 119 KRLRIVVTGGAG--FVGSHLVDKLIGRGDEVIV 149 (436)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 456899999999 9999999999999999987
No 388
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=77.69 E-value=6.8 Score=35.53 Aligned_cols=85 Identities=13% Similarity=0.160 Sum_probs=46.8
Q ss_pred EEEEecccCchhhHHHHHHHHhc-cCcEEEe---cchhhHHHHHhhCCc---chhchhhhccccc--cceEE-EeecCcC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT---ICKDDYEKLKLRIPV---EAQHNLVLSTSYA--AHKTI-WLVGDDL 534 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~-~~~~v~~---~~~~~~~~l~~~~~~---~~~~~l~~~~~~~--~~~i~-w~vg~~~ 534 (638)
+|.++|++| .+|+.++..|.+ +++++.. +++++-++++..-+. ..... .+....+ .+++| -.+++..
T Consensus 1 ki~iiG~~g--~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~DvV~~~~~~~~ 77 (122)
T smart00859 1 KVAIVGATG--YVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLE-LEPEDFEELAVDIVFLALPHGV 77 (122)
T ss_pred CEEEECCCC--hHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccc-cccCChhhcCCCEEEEcCCcHH
Confidence 478999999 999999999996 6877666 332222222222111 00001 0111121 33454 2355554
Q ss_pred Chh----hhhcCCCCceeeccc
Q 006623 535 TGK----EQARAPKGTIFIPYT 552 (638)
Q Consensus 535 ~~~----~q~~a~~G~~f~~~~ 552 (638)
..+ -+..+.+|.+++|.|
T Consensus 78 ~~~~~~~~~~~~~~g~~viD~s 99 (122)
T smart00859 78 SKEIAPLLPKAAEAGVKVIDLS 99 (122)
T ss_pred HHHHHHHHHhhhcCCCEEEECC
Confidence 444 233468999999988
No 389
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=77.64 E-value=4.8 Score=47.33 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=27.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT 494 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~ 494 (638)
..++|+|+|+|| =||+.+++.|.++ |.+|..
T Consensus 314 ~~~~VLVTGatG--FIGs~Lv~~Ll~~~g~~V~~ 345 (660)
T PRK08125 314 RRTRVLILGVNG--FIGNHLTERLLRDDNYEVYG 345 (660)
T ss_pred cCCEEEEECCCc--hHHHHHHHHHHhCCCcEEEE
Confidence 367899999999 9999999999975 789987
No 390
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=77.60 E-value=4.3 Score=43.29 Aligned_cols=87 Identities=18% Similarity=0.183 Sum_probs=57.7
Q ss_pred HHHHHHhcCcC-----CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccce
Q 006623 451 AAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHK 525 (638)
Q Consensus 451 taavv~~~ip~-----~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 525 (638)
|.+.|++=++. .-++|+++|... =||+=++..|..++..|++ -.+...+|.+.+ -+|+.
T Consensus 139 Tp~gi~~ll~~~~i~l~Gk~~vVVGrS~--iVGkPla~lL~~~naTVtv-------------cHs~T~~l~~~~-k~ADI 202 (283)
T COG0190 139 TPAGIMTLLEEYGIDLRGKNVVVVGRSN--IVGKPLALLLLNANATVTV-------------CHSRTKDLASIT-KNADI 202 (283)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCC--cCcHHHHHHHHhCCCEEEE-------------EcCCCCCHHHHh-hhCCE
Confidence 55555544432 578999999997 9999999999999999999 111123333333 13333
Q ss_pred EEEeecCc--CChhhhhcCCCCceeecccccCCc
Q 006623 526 TIWLVGDD--LTGKEQARAPKGTIFIPYTQIPPR 557 (638)
Q Consensus 526 i~w~vg~~--~~~~~q~~a~~G~~f~~~~~~~~~ 557 (638)
+|.++|+. ++.+. .++|+++||+- +.+.
T Consensus 203 vv~AvG~p~~i~~d~---vk~gavVIDVG-inrv 232 (283)
T COG0190 203 VVVAVGKPHFIKADM---VKPGAVVIDVG-INRV 232 (283)
T ss_pred EEEecCCcccccccc---ccCCCEEEecC-Cccc
Confidence 44566642 44443 49999999997 5554
No 391
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=77.59 E-value=3.1 Score=45.01 Aligned_cols=61 Identities=18% Similarity=0.157 Sum_probs=49.4
Q ss_pred HHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhc
Q 006623 451 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH 513 (638)
Q Consensus 451 taavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~ 513 (638)
-.....-..|+-..+|+++|... -+|.++|.-+.++|-+|++ |++++++++++++.-.++.
T Consensus 21 ~~~~~~~~~~k~~~hi~itggS~--glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~ 83 (331)
T KOG1210|consen 21 LDHRSFIVKPKPRRHILITGGSS--GLGLALALECKREGADVTITARSGKKLLEAKAELELLTQV 83 (331)
T ss_pred HHHHhhhcccCccceEEEecCcc--hhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhcc
Confidence 33344445566678999999985 9999999999999999999 9999999999987755543
No 392
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=77.49 E-value=7.4 Score=42.18 Aligned_cols=85 Identities=13% Similarity=0.162 Sum_probs=53.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEeecCc------
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGDD------ 533 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~~------ 533 (638)
..++|.++|.. .||+++|+.|...|.+|.. ++.+..... + +...++.++. +.+++| ++--.
T Consensus 145 ~g~~VgIIG~G---~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~---~--~~~~~l~ell--~~aDiV-il~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTG---RIGAATAKIYAGFGATITAYDAYPNKDLDF---L--TYKDSVKEAI--KDADII-SLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEeCChhHhhhh---h--hccCCHHHHH--hcCCEE-EEeCCCcHHHH
Confidence 34579999986 9999999999999999998 443321110 0 1111222221 223444 22223
Q ss_pred --CChhhhhcCCCCceeecccc---cCCc
Q 006623 534 --LTGKEQARAPKGTIFIPYTQ---IPPR 557 (638)
Q Consensus 534 --~~~~~q~~a~~G~~f~~~~~---~~~~ 557 (638)
+..+....+++|++++.++| ++..
T Consensus 214 ~li~~~~l~~mk~gavlIN~aRG~~vd~~ 242 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAARGAVINTP 242 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCCccccCHH
Confidence 33467778999999999999 5544
No 393
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=77.43 E-value=3.1 Score=44.26 Aligned_cols=38 Identities=16% Similarity=0.224 Sum_probs=29.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHH
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKL 503 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l 503 (638)
++|+|+|+|| =||+.+|+.|.++ |.+|.. |+.++...+
T Consensus 2 ~~ilVtGatG--fiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~ 42 (347)
T PRK11908 2 KKVLILGVNG--FIGHHLSKRILETTDWEVYGMDMQTDRLGDL 42 (347)
T ss_pred cEEEEECCCc--HHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh
Confidence 4699999999 9999999999865 688886 555544433
No 394
>PLN02572 UDP-sulfoquinovose synthase
Probab=77.41 E-value=2.4 Score=47.53 Aligned_cols=30 Identities=27% Similarity=0.234 Sum_probs=28.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.++|+|+|++| =||+.+|+.|.++|.+|.+
T Consensus 47 ~k~VLVTGatG--fIGs~Lv~~L~~~G~~V~~ 76 (442)
T PLN02572 47 KKKVMVIGGDG--YCGWATALHLSKRGYEVAI 76 (442)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCeEEE
Confidence 56799999999 9999999999999999987
No 395
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=77.26 E-value=7.3 Score=40.76 Aligned_cols=88 Identities=15% Similarity=0.162 Sum_probs=53.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEE-EeecCc------C
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTI-WLVGDD------L 534 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~-w~vg~~------~ 534 (638)
.+|.++|. | .+|+++|+.|.+.|.+|.. |++++.+++++.- .....++.+.. +.+++| -.+-+. +
T Consensus 3 ~~IgviG~-G--~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g-~~~~~~~~e~~--~~~d~vi~~vp~~~~~~~v~ 76 (296)
T PRK11559 3 MKVGFIGL-G--IMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAG-AETASTAKAVA--EQCDVIITMLPNSPHVKEVA 76 (296)
T ss_pred ceEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC-CeecCCHHHHH--hcCCEEEEeCCCHHHHHHHH
Confidence 36899996 5 9999999999999999988 7888887776541 11111111111 222333 122111 1
Q ss_pred Ch-h-hhhcCCCCceeecccccCCc
Q 006623 535 TG-K-EQARAPKGTIFIPYTQIPPR 557 (638)
Q Consensus 535 ~~-~-~q~~a~~G~~f~~~~~~~~~ 557 (638)
.. + -...+++|+++++.|.++|.
T Consensus 77 ~~~~~~~~~~~~g~iiid~st~~~~ 101 (296)
T PRK11559 77 LGENGIIEGAKPGTVVIDMSSIAPL 101 (296)
T ss_pred cCcchHhhcCCCCcEEEECCCCCHH
Confidence 11 1 12345889999999998885
No 396
>PRK13243 glyoxylate reductase; Reviewed
Probab=76.87 E-value=8.1 Score=41.84 Aligned_cols=100 Identities=11% Similarity=0.081 Sum_probs=61.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEee-------cC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV-------GD 532 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v-------g~ 532 (638)
..++|.++|- | .||+.+|+.|...|.+|.. ++.+.-. ..+..... .+|.+.. +.+|+|.+. -.
T Consensus 149 ~gktvgIiG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~~~~-~~l~ell--~~aDiV~l~lP~t~~T~~ 220 (333)
T PRK13243 149 YGKTIGIIGF-G--RIGQAVARRAKGFGMRILYYSRTRKPEA--EKELGAEY-RPLEELL--RESDFVSLHVPLTKETYH 220 (333)
T ss_pred CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcCCEe-cCHHHHH--hhCCEEEEeCCCChHHhh
Confidence 4678999998 5 9999999999999999988 3332211 11111111 1222222 222343111 23
Q ss_pred cCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecCC
Q 006623 533 DLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP 569 (638)
Q Consensus 533 ~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~ 569 (638)
.++.+....+++|++++.++| ++.+ +++ -|++..+-+
T Consensus 221 ~i~~~~~~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gAaLDV~~~EP~ 272 (333)
T PRK13243 221 MINEERLKLMKPTAILVNTARGKVVDTKALVKALKEGWIAGAGLDVFEEEPY 272 (333)
T ss_pred ccCHHHHhcCCCCeEEEECcCchhcCHHHHHHHHHcCCeEEEEeccCCCCCC
Confidence 456688899999999999999 4443 222 488877643
No 397
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=76.85 E-value=5.9 Score=43.12 Aligned_cols=75 Identities=17% Similarity=0.179 Sum_probs=48.7
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHh---hCCcchhchhhhccccccceEEEeecCcCCh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL---RIPVEAQHNLVLSTSYAAHKTIWLVGDDLTG 536 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~---~~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~ 536 (638)
...|+|+|+.| =||+.++..|-++|..|++ .+...+++|++ -..+ . .+.. -..||..|.
T Consensus 2 ~~~VLVtGgaG--yiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~--------~----~~v~-f~~~Dl~D~ 66 (343)
T KOG1371|consen 2 GKHVLVTGGAG--YIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGE--------G----KSVF-FVEGDLNDA 66 (343)
T ss_pred CcEEEEecCCc--ceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCC--------C----CceE-EEEeccCCH
Confidence 46899999999 9999999999999999999 22223443332 1221 1 1123 267888888
Q ss_pred hhhhcCC---CCceeeccc
Q 006623 537 KEQARAP---KGTIFIPYT 552 (638)
Q Consensus 537 ~~q~~a~---~G~~f~~~~ 552 (638)
+-+++.- ++..++-|+
T Consensus 67 ~~L~kvF~~~~fd~V~Hfa 85 (343)
T KOG1371|consen 67 EALEKLFSEVKFDAVMHFA 85 (343)
T ss_pred HHHHHHHhhcCCceEEeeh
Confidence 7765533 344455544
No 398
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=76.50 E-value=2.3 Score=44.18 Aligned_cols=27 Identities=15% Similarity=0.306 Sum_probs=24.0
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
|+|+||+| =||+.+|+.|.++|.++..
T Consensus 2 ilVtGa~G--fiG~~l~~~L~~~g~~~v~ 28 (308)
T PRK11150 2 IIVTGGAG--FIGSNIVKALNDKGITDIL 28 (308)
T ss_pred EEEecCCc--HHHHHHHHHHHhCCCceEE
Confidence 79999999 9999999999999985444
No 399
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=76.50 E-value=4.8 Score=42.79 Aligned_cols=29 Identities=21% Similarity=0.314 Sum_probs=25.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
..+|.++| .| .||+.+|+.|.++|..+.+
T Consensus 3 ~~~v~IvG-~G--liG~s~a~~l~~~g~~v~i 31 (279)
T COG0287 3 SMKVGIVG-LG--LMGGSLARALKEAGLVVRI 31 (279)
T ss_pred CcEEEEEC-Cc--hHHHHHHHHHHHcCCeEEE
Confidence 35677777 77 9999999999999999976
No 400
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=76.42 E-value=3 Score=41.37 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=24.3
Q ss_pred EEEEecccCchhhHHHHHHHHhcc--CcEEEe
Q 006623 465 HVLLRGTVTANKVANAVASSLCQM--GIKVAT 494 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~--~~~v~~ 494 (638)
+|+++|++| -||+++|+.|+++ ++++..
T Consensus 2 ~vlItGas~--gIG~~ia~~l~~~~~~~~v~~ 31 (235)
T PRK09009 2 NILIVGGSG--GIGKAMVKQLLERYPDATVHA 31 (235)
T ss_pred EEEEECCCC--hHHHHHHHHHHHhCCCCEEEE
Confidence 689999998 9999999999987 466655
No 401
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=76.13 E-value=5.6 Score=45.28 Aligned_cols=106 Identities=16% Similarity=0.163 Sum_probs=64.7
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc-c----hhchhhhcc-ccccceEEEee---cC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-E----AQHNLVLST-SYAAHKTIWLV---GD 532 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~-~----~~~~l~~~~-~~~~~~i~w~v---g~ 532 (638)
++|.++|.- ..|+++|+.|.++|.+|.+ |++++.+.++++... + ...++.++. +.+.++++++. |+
T Consensus 2 ~~IgvIGLG---~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~ 78 (470)
T PTZ00142 2 SDIGLIGLA---VMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGE 78 (470)
T ss_pred CEEEEEeEh---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChH
Confidence 578899976 9999999999999999999 999998888765221 1 122333222 11223333343 11
Q ss_pred cCCh--hhh-hcCCCCceeecccccCCc-------CCC-CCceeecCCccc
Q 006623 533 DLTG--KEQ-ARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMI 572 (638)
Q Consensus 533 ~~~~--~~q-~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~ 572 (638)
.++. ++. ....+|.++++.+-..++ +++ +...|.+.|+.-
T Consensus 79 ~v~~vi~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi~fldapVSG 129 (470)
T PTZ00142 79 AVDETIDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYLGMGVSG 129 (470)
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEcCCCCC
Confidence 1111 111 235789999999875544 121 455576666654
No 402
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=76.04 E-value=2.5 Score=43.44 Aligned_cols=28 Identities=11% Similarity=0.173 Sum_probs=25.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccC--cEEEe
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMG--IKVAT 494 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~~ 494 (638)
+|+++|+|| .||+++++.|.++| .+|+.
T Consensus 1 ~ilItGatG--~iG~~l~~~l~~~~~~~~v~~ 30 (317)
T TIGR01181 1 RILVTGGAG--FIGSNFVRYILNEHPDAEVIV 30 (317)
T ss_pred CEEEEcCCc--hHHHHHHHHHHHhCCCCEEEE
Confidence 489999999 99999999999877 77876
No 403
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=76.02 E-value=8.9 Score=42.53 Aligned_cols=86 Identities=14% Similarity=0.041 Sum_probs=55.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEeec----------
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVG---------- 531 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg---------- 531 (638)
..++|-++|.- .||+++|+.|..-|.+|+..++.+-+ .... ....+|.+.. +.+|++ ++-
T Consensus 115 ~gktvGIIG~G---~IG~~vA~~l~a~G~~V~~~dp~~~~---~~~~-~~~~~L~ell--~~sDiI-~lh~PLt~~g~~~ 184 (378)
T PRK15438 115 HDRTVGIVGVG---NVGRRLQARLEALGIKTLLCDPPRAD---RGDE-GDFRSLDELV--QEADIL-TFHTPLFKDGPYK 184 (378)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCcccc---cccc-cccCCHHHHH--hhCCEE-EEeCCCCCCcccc
Confidence 57899999985 99999999999999999993322111 0000 0111222222 223444 211
Q ss_pred --CcCChhhhhcCCCCceeecccc---cCCc
Q 006623 532 --DDLTGKEQARAPKGTIFIPYTQ---IPPR 557 (638)
Q Consensus 532 --~~~~~~~q~~a~~G~~f~~~~~---~~~~ 557 (638)
--++.++..++++|+++|..+| |+.+
T Consensus 185 T~~li~~~~l~~mk~gailIN~aRG~vVDe~ 215 (378)
T PRK15438 185 TLHLADEKLIRSLKPGAILINACRGAVVDNT 215 (378)
T ss_pred cccccCHHHHhcCCCCcEEEECCCchhcCHH
Confidence 2366788899999999999999 5554
No 404
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=76.00 E-value=2.7 Score=43.00 Aligned_cols=28 Identities=18% Similarity=0.348 Sum_probs=26.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
+|+|+|+|| -||+++++.|.++|.+|..
T Consensus 1 kilv~G~tG--~iG~~l~~~l~~~g~~v~~ 28 (287)
T TIGR01214 1 RILITGANG--QLGRELVQQLSPEGRVVVA 28 (287)
T ss_pred CEEEEcCCC--HHHHHHHHHHHhcCCEEEE
Confidence 489999999 9999999999999999886
No 405
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=75.65 E-value=7.1 Score=40.32 Aligned_cols=42 Identities=19% Similarity=0.168 Sum_probs=35.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
....|++.|++| .+|.++++.+...|.+|.. ++.++.+.+++
T Consensus 162 ~~~~vlI~ga~g--~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 205 (332)
T cd08259 162 KGDTVLVTGAGG--GVGIHAIQLAKALGARVIAVTRSPEKLKILKE 205 (332)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 345799999998 9999999999999999877 77777776643
No 406
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=75.27 E-value=10 Score=42.10 Aligned_cols=82 Identities=16% Similarity=0.026 Sum_probs=52.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEee-----------
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV----------- 530 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v----------- 530 (638)
..++|-++|.- .||+.+|+.|..-|.+|+..+..+-. .+ ......+|.+.. +.++++ ++
T Consensus 115 ~gktvGIIG~G---~IG~~va~~l~a~G~~V~~~Dp~~~~---~~-~~~~~~~l~ell--~~aDiV-~lh~Plt~~g~~~ 184 (381)
T PRK00257 115 AERTYGVVGAG---HVGGRLVRVLRGLGWKVLVCDPPRQE---AE-GDGDFVSLERIL--EECDVI-SLHTPLTKEGEHP 184 (381)
T ss_pred CcCEEEEECCC---HHHHHHHHHHHHCCCEEEEECCcccc---cc-cCccccCHHHHH--hhCCEE-EEeCcCCCCcccc
Confidence 46789999986 99999999999999999983321110 00 000111222221 222333 21
Q ss_pred -cCcCChhhhhcCCCCceeecccc
Q 006623 531 -GDDLTGKEQARAPKGTIFIPYTQ 553 (638)
Q Consensus 531 -g~~~~~~~q~~a~~G~~f~~~~~ 553 (638)
-.-++.+...++++|+++|-.+|
T Consensus 185 T~~li~~~~l~~mk~gailIN~aR 208 (381)
T PRK00257 185 TRHLLDEAFLASLRPGAWLINASR 208 (381)
T ss_pred ccccCCHHHHhcCCCCeEEEECCC
Confidence 13456788999999999999999
No 407
>PLN02256 arogenate dehydrogenase
Probab=75.21 E-value=7.4 Score=41.71 Aligned_cols=58 Identities=17% Similarity=0.339 Sum_probs=39.7
Q ss_pred ecCCCCcceeeecCChhHH--HHHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 434 ERQPNKLKIKVVDGSSLAA--AVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 434 ~k~p~~L~irvv~Gnslta--avv~~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.|.|..|++|-+|...--- .-.-+++.+ ...+|.++| .| .+|.++|+.|.+.|.+|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIG-~G--~mG~slA~~L~~~G~~V~~ 64 (304)
T PLN02256 4 SRRPRSLRVRAIDAAQPFDYESRLQEELEKSRKLKIGIVG-FG--NFGQFLAKTFVKQGHTVLA 64 (304)
T ss_pred CCCCCCcccccccccCCCChHhHHhHhhccCCCCEEEEEe-eC--HHHHHHHHHHHhCCCEEEE
Confidence 3556668888777532111 112344444 455899999 57 9999999999999988887
No 408
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=75.17 E-value=7 Score=40.31 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=33.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
...|++.|++| .+|.++++.+..+|.+|.+ +++++.+.++
T Consensus 147 ~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 188 (325)
T cd05280 147 DGPVLVTGATG--GVGSIAVAILAKLGYTVVALTGKEEQADYLK 188 (325)
T ss_pred CCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 45899999998 9999999888899999876 7777777764
No 409
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=75.17 E-value=17 Score=38.98 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=64.2
Q ss_pred HHHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHH
Q 006623 405 EADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVV 455 (638)
Q Consensus 405 ~A~k~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv 455 (638)
-|.++|.+++.|+. +.|+|.+ ....-+.+.|+|+ ..++.|+.+-+ +=+.++
T Consensus 64 A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~~D~iv~R~~~~~~~~~~a~~~~vPVINag~~~~HPtQaL~Dl~Ti 143 (304)
T PRK00779 64 GMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRYVDAIMIRTFEHETLEELAEYSTVPVINGLTDLSHPCQILADLLTI 143 (304)
T ss_pred HHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHhCCEEEEcCCChhHHHHHHHhCCCCEEeCCCCCCChHHHHHHHHHH
Confidence 35789999999964 3344544 4456677888887 35677776643 113444
Q ss_pred HhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhh
Q 006623 456 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499 (638)
Q Consensus 456 ~~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~ 499 (638)
.+.... +..+|.++|..+ .+.+..+..|.+-|.+|.+-..+.
T Consensus 144 ~e~~g~l~gl~i~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~ 186 (304)
T PRK00779 144 YEHRGSLKGLKVAWVGDGN--NVANSLLLAAALLGFDLRVATPKG 186 (304)
T ss_pred HHHhCCcCCcEEEEEeCCC--ccHHHHHHHHHHcCCEEEEECCcc
Confidence 444432 346899999965 899999999999999999944443
No 410
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=74.96 E-value=3.9 Score=42.96 Aligned_cols=39 Identities=10% Similarity=0.175 Sum_probs=33.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
++|.++|+. .+|+++|..|++.|.+|++ +++++.++.++
T Consensus 4 ~~I~ViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (291)
T PRK06035 4 KVIGVVGSG---VMGQGIAQVFARTGYDVTIVDVSEEILKNAME 44 (291)
T ss_pred cEEEEECcc---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 579999997 9999999999999999999 77777775443
No 411
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=74.65 E-value=4.5 Score=42.44 Aligned_cols=40 Identities=13% Similarity=0.242 Sum_probs=35.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
++|.++|+- .+|+++|..|++.|.+|++ +++++.++++++
T Consensus 2 ~~V~VIG~G---~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~ 43 (288)
T PRK09260 2 EKLVVVGAG---VMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQE 43 (288)
T ss_pred cEEEEECcc---HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence 479999995 9999999999999999999 888888887654
No 412
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=74.64 E-value=10 Score=37.57 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=33.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
....|++.|++| .+|.++++.+..+|+++.. ++.++.+.+++
T Consensus 108 ~g~~vlv~g~~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 151 (293)
T cd05195 108 KGESVLIHAAAG--GVGQAAIQLAQHLGAEVFATVGSEEKREFLRE 151 (293)
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 346899999998 9999999988899999887 56666666643
No 413
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=74.61 E-value=11 Score=41.10 Aligned_cols=162 Identities=17% Similarity=0.220 Sum_probs=94.3
Q ss_pred HHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 006623 406 ADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV 456 (638)
Q Consensus 406 A~k~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gnsl---------taavv~ 456 (638)
+.++|.+++.|+. +.++|. |.+..-..+.|+|+ ..+|+|+.|-|- =+.++.
T Consensus 67 ~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 146 (334)
T PRK12562 67 AYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQ 146 (334)
T ss_pred HHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHhCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 4679999999964 333444 45566677888876 357889887541 245666
Q ss_pred hcCc---CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH-------HHHhhCCcchhchhhhccc----cc
Q 006623 457 NSLP---KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE-------KLKLRIPVEAQHNLVLSTS----YA 522 (638)
Q Consensus 457 ~~ip---~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~-------~l~~~~~~~~~~~l~~~~~----~~ 522 (638)
+... -+..+|.++|... +.+++..+..+++-|.++.+-.++.|+ +.++ ...+.+.++....+ .+
T Consensus 147 e~~g~~~l~gl~va~vGD~~-~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~-~~~~~g~~~~~~~d~~~a~~ 224 (334)
T PRK12562 147 EHLPGKAFNEMTLVYAGDAR-NNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAECSA-LAQKHGGKITLTEDIAAGVK 224 (334)
T ss_pred HHhCCCCcCCcEEEEECCCC-CCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHHHHH-HHHHcCCeEEEEcCHHHHhC
Confidence 6553 2357999999863 468999999888999999983333321 1111 11111112111112 24
Q ss_pred cceEEEeecCcCChhhhhc--CCCCceeecccccCCc--CC--CCCcee-ecCCcc
Q 006623 523 AHKTIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--KL--RKDCFY-HSTPAM 571 (638)
Q Consensus 523 ~~~i~w~vg~~~~~~~q~~--a~~G~~f~~~~~~~~~--~~--R~dc~y-~~~~a~ 571 (638)
.++|| ....|.+..+|.. ...-..|-+| |++++ +. |+||.+ |.+|+.
T Consensus 225 ~aDvv-yt~~w~sm~~~~~~~~~~~~~~~~y-~v~~ell~~a~~~~~i~mHcLP~~ 278 (334)
T PRK12562 225 GADFI-YTDVWVSMGEPKEKWAERIALLRGY-QVNSKMMALTGNPQVKFLHCLPAF 278 (334)
T ss_pred CCCEE-EEcCccccccchhhHHHHHHhccCC-cCCHHHHHhhcCCCCEEECCCCCC
Confidence 55776 5555443332210 0001235566 48888 33 688875 888873
No 414
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=74.40 E-value=7.8 Score=44.63 Aligned_cols=102 Identities=22% Similarity=0.196 Sum_probs=62.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEee--------cCc
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV--------GDD 533 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v--------g~~ 533 (638)
..++|.++|-- .||+++|+.|...|.+|...++..-.+-..+.......+|.+.. +.+|++ ++ -..
T Consensus 137 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~~l~ell--~~aDvV-~l~lPlt~~T~~l 210 (525)
T TIGR01327 137 YGKTLGVIGLG---RIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELVDDLDELL--ARADFI-TVHTPLTPETRGL 210 (525)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEcCCHHHHH--hhCCEE-EEccCCChhhccC
Confidence 45789999985 99999999999999999882221001111122221111233322 122333 21 234
Q ss_pred CChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecCC
Q 006623 534 LTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP 569 (638)
Q Consensus 534 ~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~ 569 (638)
++.+....+++|++++.++| ++.+ +++ -|++..+-+
T Consensus 211 i~~~~l~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gAaLDVf~~EP~ 261 (525)
T TIGR01327 211 IGAEELAKMKKGVIIVNCARGGIIDEAALYEALEEGHVRAAALDVFEKEPP 261 (525)
T ss_pred cCHHHHhcCCCCeEEEEcCCCceeCHHHHHHHHHcCCeeEEEEecCCCCCC
Confidence 56788999999999999999 4433 444 677776643
No 415
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=74.37 E-value=5 Score=42.12 Aligned_cols=40 Identities=25% Similarity=0.307 Sum_probs=34.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
++|.++|+. .+|+++|..|++.|.+|++ ++++..++.++.
T Consensus 4 ~kIaViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 4 KNVTVAGAG---VLGSQIAFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred cEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 579999985 9999999999999999999 777777766544
No 416
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=74.30 E-value=8.6 Score=40.42 Aligned_cols=43 Identities=12% Similarity=0.156 Sum_probs=36.0
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~ 508 (638)
..|++.|++| -||.++++.+...|. +|.. +++++.+.++++++
T Consensus 156 ~~VlI~ga~g--~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG 201 (345)
T cd08293 156 QTMVVSGAAG--ACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG 201 (345)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC
Confidence 7899999998 999999998888898 6766 77888888877544
No 417
>PLN02306 hydroxypyruvate reductase
Probab=74.27 E-value=8.8 Score=42.64 Aligned_cols=91 Identities=12% Similarity=0.089 Sum_probs=56.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe--cch-hhHHHHHhhCCc------------chhchhhhccccccce
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICK-DDYEKLKLRIPV------------EAQHNLVLSTSYAAHK 525 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~--~~~-~~~~~l~~~~~~------------~~~~~l~~~~~~~~~~ 525 (638)
..++|-++|.- .||+++|+.|+ --|.+|+. ++. ++.+......+. +...+|.+.. +.+|
T Consensus 164 ~gktvGIiG~G---~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell--~~sD 238 (386)
T PLN02306 164 KGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVL--READ 238 (386)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHH--hhCC
Confidence 45788999976 99999999997 78999987 222 112111111110 0111233222 3334
Q ss_pred EEEee-------cCcCChhhhhcCCCCceeecccc---cCCc
Q 006623 526 TIWLV-------GDDLTGKEQARAPKGTIFIPYTQ---IPPR 557 (638)
Q Consensus 526 i~w~v-------g~~~~~~~q~~a~~G~~f~~~~~---~~~~ 557 (638)
+|.+. -..|+.++..+|++|+.||-++| |+.+
T Consensus 239 iV~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~lVDe~ 280 (386)
T PLN02306 239 VISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPVIDEV 280 (386)
T ss_pred EEEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccccCHH
Confidence 55231 23577888999999999999999 5554
No 418
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=73.98 E-value=12 Score=37.88 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=34.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
.+.|++.|+.| .+|.++++.+..+|.+|.+ +++++.+.+++
T Consensus 145 g~~vlI~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 187 (325)
T cd08253 145 GETVLVHGGSG--AVGHAAVQLARWAGARVIATASSAEGAELVRQ 187 (325)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 46899999987 9999999999999999888 67777776643
No 419
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=73.80 E-value=8.2 Score=40.05 Aligned_cols=43 Identities=14% Similarity=0.148 Sum_probs=36.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~ 507 (638)
...|++.|++| .+|.++++.+.+.|.+|+. ++.++.+.+++..
T Consensus 146 ~~~vlI~g~~g--~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~ 190 (329)
T cd05288 146 GETVVVSAAAG--AVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL 190 (329)
T ss_pred CCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc
Confidence 47899999987 9999999999999999877 6777777776633
No 420
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=73.59 E-value=4.2 Score=42.62 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=33.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
++|.++|+- .+|+++|..|++.|.+|++ +++++.++.++
T Consensus 5 ~kI~vIGaG---~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 5 KKVGVIGAG---QMGNGIAHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred CEEEEECCc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 579999996 9999999999999999999 88887776543
No 421
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=73.52 E-value=7 Score=42.06 Aligned_cols=97 Identities=12% Similarity=0.194 Sum_probs=58.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEeec--------C
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVG--------D 532 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg--------~ 532 (638)
.++|.++|-- +||+++|+.|..-|.+|.. +++++....+... ....|.+.. +.++++ ++- .
T Consensus 136 g~tvgIvG~G---~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~---~~~~l~e~l--~~aDvv-v~~lPlt~~T~~ 206 (312)
T PRK15469 136 DFTIGILGAG---VLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFA---GREELSAFL--SQTRVL-INLLPNTPETVG 206 (312)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeec---ccccHHHHH--hcCCEE-EECCCCCHHHHH
Confidence 4688899876 9999999999999999988 3322211111000 011222211 222343 221 2
Q ss_pred cCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006623 533 DLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 568 (638)
Q Consensus 533 ~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 568 (638)
.++.+...++++|++++.++| |+.+ ++| -|++..+-
T Consensus 207 li~~~~l~~mk~ga~lIN~aRG~vVde~aL~~aL~~g~i~gaalDVf~~EP 257 (312)
T PRK15469 207 IINQQLLEQLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFSREP 257 (312)
T ss_pred HhHHHHHhcCCCCcEEEECCCccccCHHHHHHHHhcCCeeeEEecCCCCCC
Confidence 234567889999999999999 5544 333 47777663
No 422
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=73.46 E-value=15 Score=41.10 Aligned_cols=92 Identities=14% Similarity=0.104 Sum_probs=59.5
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhh------------hc-cccccceEE
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV------------LS-TSYAAHKTI 527 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~------------~~-~~~~~~~i~ 527 (638)
..+|.++|.. -+|...|..|+++|.+|+. +++++.+.++..........|. .. +..+.++++
T Consensus 3 ~~kI~VIGlG---~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvv 79 (415)
T PRK11064 3 FETISVIGLG---YIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAF 79 (415)
T ss_pred ccEEEEECcc---hhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEE
Confidence 3579999986 9999999999999999998 8899999887552221111111 11 112333333
Q ss_pred -EeecCcCCh-------------hh-hhcCCCCceeecccccCCc
Q 006623 528 -WLVGDDLTG-------------KE-QARAPKGTIFIPYTQIPPR 557 (638)
Q Consensus 528 -w~vg~~~~~-------------~~-q~~a~~G~~f~~~~~~~~~ 557 (638)
=.|+...++ ++ ...+++|++++.-|-+||-
T Consensus 80 ii~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pg 124 (415)
T PRK11064 80 LIAVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSPVG 124 (415)
T ss_pred EEEcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 245553211 11 2336899999999988885
No 423
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=73.34 E-value=5.1 Score=42.51 Aligned_cols=37 Identities=16% Similarity=0.092 Sum_probs=31.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
+|.++| .| -+|+++|..|+++|.+|++ ++++..++.+
T Consensus 4 ~V~VIG-~G--~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 4 SVAIIG-AG--LIGRAWAIVFARAGHEVRLWDADPAAAAAAP 42 (308)
T ss_pred EEEEEC-cc--HHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence 689999 55 9999999999999999999 7777776544
No 424
>cd03514 CrtR_beta-carotene-hydroxylase Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae. Carotenoids are important natural pigments; zeaxanthin and lutein are the only dietary carotenoids that accumulate in the macular region of the retina and lens. It is proposed that these carotenoids protect ocular tissues against photooxidative damage. CrtR does not show overall amino acid sequence similarity to the beta-carotene hydroxylases similar to CrtZ, an astaxanthin biosynthetic beta-carotene hydroxylase. However, CrtR does show sequence similarity to the green alga, Haematococcus pluvialis, beta-carotene ketolase (CrtW), which converts beta-carotene to canthaxanthin. Sequences of the CrtR_beta-carotene-hydroxylase domain family, as well as, the CrtW_beta-carotene-ketolase domain family appear to be structurally related
Probab=73.33 E-value=27 Score=35.29 Aligned_cols=22 Identities=27% Similarity=0.410 Sum_probs=15.7
Q ss_pred cccccCCchhhhhhhcCCCCCc
Q 006623 239 LKFLMYTPSYHSLHHTQFRTNY 260 (638)
Q Consensus 239 L~~li~tp~~H~lHH~~~~~NY 260 (638)
+.++...-.+|..||...+..+
T Consensus 167 ~~~l~~~~nyH~~HHL~P~IP~ 188 (207)
T cd03514 167 LNPLIMGQNYHLVHHLWPSIPW 188 (207)
T ss_pred HheeecCCchhHHHhCCCCCch
Confidence 3555556679999999876544
No 425
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=73.23 E-value=6.6 Score=42.59 Aligned_cols=89 Identities=18% Similarity=0.175 Sum_probs=56.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEee-------cCcCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV-------GDDLT 535 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v-------g~~~~ 535 (638)
-++|-+.|-- +||+++|+.|.--|-+|.-.++.+-.+.+++....+.. |.+.. +.+|++.+. -.-|.
T Consensus 146 gktvGIiG~G---rIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~-l~ell--~~sDii~l~~Plt~~T~hLin 219 (324)
T COG1052 146 GKTLGIIGLG---RIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVD-LDELL--AESDIISLHCPLTPETRHLIN 219 (324)
T ss_pred CCEEEEECCC---HHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceecc-HHHHH--HhCCEEEEeCCCChHHhhhcC
Confidence 5677778765 99999999999888888883333223333444333333 33322 111232121 24578
Q ss_pred hhhhhcCCCCceeecccc---cCCc
Q 006623 536 GKEQARAPKGTIFIPYTQ---IPPR 557 (638)
Q Consensus 536 ~~~q~~a~~G~~f~~~~~---~~~~ 557 (638)
.+++.+|++|++++-.+| ++.+
T Consensus 220 ~~~l~~mk~ga~lVNtaRG~~VDe~ 244 (324)
T COG1052 220 AEELAKMKPGAILVNTARGGLVDEQ 244 (324)
T ss_pred HHHHHhCCCCeEEEECCCccccCHH
Confidence 889999999999999998 5544
No 426
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=73.22 E-value=9.4 Score=39.52 Aligned_cols=41 Identities=20% Similarity=0.324 Sum_probs=34.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
+.+.|++.|++| .+|.++++....+|.++.. .++++.+.++
T Consensus 146 ~~~~vlI~ga~g--~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~ 188 (324)
T cd08288 146 GDGPVLVTGAAG--GVGSVAVALLARLGYEVVASTGRPEEADYLR 188 (324)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 456899999998 9999999988899999877 6777777774
No 427
>PLN02858 fructose-bisphosphate aldolase
Probab=72.97 E-value=8.9 Score=49.21 Aligned_cols=179 Identities=11% Similarity=0.084 Sum_probs=101.8
Q ss_pred cccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccc-cc-cc-cCCceee---ecC-CCCcceeeecCC----------
Q 006623 386 YNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQG-EE-LN-RNGEIYL---ERQ-PNKLKIKVVDGS---------- 448 (638)
Q Consensus 386 y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~-e~-ln-~~g~~~~---~k~-p~~L~irvv~Gn---------- 448 (638)
|.-.|..+-+.|-+.-|...|++.|+..-...+..+. ++ .+ |.|+.-. .|. .+.-.+++.+-|
T Consensus 234 ~~~~F~l~l~~KDl~la~~~A~~~g~~lpl~~~a~~~~~~a~~~G~g~~D~sav~~~~~~~~g~~~~~~~~~~~~~~~~~ 313 (1378)
T PLN02858 234 YIEGRFLNVLVQNLGIVLDMAKSLPFPLPLLAVAHQQLISGSSSMQGDDTATSLAKVWEKVFGVNILEAANRELYKPEDL 313 (1378)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHcCCCccccccccccChHHH
Confidence 3334455677788889999999999987655444443 11 11 1121100 000 000011222222
Q ss_pred --hhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccc
Q 006623 449 --SLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH 524 (638)
Q Consensus 449 --sltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 524 (638)
-+|.+ ||..++|-++|-- .+|+++|+.|.+.|.+|.. |+.++.+++++.-... ..+..++. +.+
T Consensus 314 ~~~~~~~------~~~~~~IGfIGlG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~-~~s~~e~~--~~a 381 (1378)
T PLN02858 314 AKQITMQ------AKPVKRIGFIGLG---AMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLA-GNSPAEVA--KDV 381 (1378)
T ss_pred HHHhhcc------ccCCCeEEEECch---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCee-cCCHHHHH--hcC
Confidence 22222 3456789999865 9999999999999999988 8888888887652111 11111111 122
Q ss_pred eEE-EeecC------cCC-hh-hhhcCCCCceeecccccCCcC---C-------CCCceeecCCccccCCC
Q 006623 525 KTI-WLVGD------DLT-GK-EQARAPKGTIFIPYTQIPPRK---L-------RKDCFYHSTPAMIIPPS 576 (638)
Q Consensus 525 ~i~-w~vg~------~~~-~~-~q~~a~~G~~f~~~~~~~~~~---~-------R~dc~y~~~~a~~~P~~ 576 (638)
++| -.|.+ .+. +. -...+++|.++++.|-++|.. + ++++.|.+.|.+--|..
T Consensus 382 DvVi~~V~~~~~v~~Vl~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lDAPVsGg~~~ 452 (1378)
T PLN02858 382 DVLVIMVANEVQAENVLFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVKR 452 (1378)
T ss_pred CEEEEecCChHHHHHHHhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEccCCCChhh
Confidence 333 12221 111 11 123458999999999988872 2 26888999998766653
No 428
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=72.92 E-value=10 Score=43.77 Aligned_cols=88 Identities=15% Similarity=0.150 Sum_probs=59.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchh-c------------------hhhhc--
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-H------------------NLVLS-- 518 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~-~------------------~l~~~-- 518 (638)
..++|+|.|+- -+|...+..+...|-+|.. ++.+|.+..++ ++.+.. . +..+.
T Consensus 164 pg~kVlViGaG---~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 164 PPAKVLVIGAG---VAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCCEEEEECCc---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 37799999998 8999999999999998887 77788876655 332210 0 00000
Q ss_pred ---cc-cccceEEEeecCc---------CChhhhhcCCCCceeecccccC
Q 006623 519 ---TS-YAAHKTIWLVGDD---------LTGKEQARAPKGTIFIPYTQIP 555 (638)
Q Consensus 519 ---~~-~~~~~i~w~vg~~---------~~~~~q~~a~~G~~f~~~~~~~ 555 (638)
++ .+.+|++ +-... ++++..+.+++|.++++++ ++
T Consensus 240 ~~~~~~~~gaDVV-Ietag~pg~~aP~lit~~~v~~mkpGgvIVdvg-~~ 287 (509)
T PRK09424 240 ALFAEQAKEVDII-ITTALIPGKPAPKLITAEMVASMKPGSVIVDLA-AE 287 (509)
T ss_pred HHHHhccCCCCEE-EECCCCCcccCcchHHHHHHHhcCCCCEEEEEc-cC
Confidence 01 1224665 43333 3688999999999999999 65
No 429
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=72.88 E-value=9.3 Score=42.37 Aligned_cols=123 Identities=13% Similarity=0.105 Sum_probs=74.7
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhc-----------hhhhcccc----ccceEE
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH-----------NLVLSTSY----AAHKTI 527 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~-----------~l~~~~~~----~~~~i~ 527 (638)
+|.++|.. -+|..+|..|++ |.+|+. +++++.+++++....-... .+...++. +.++++
T Consensus 2 kI~VIGlG---yvGl~~A~~lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v 77 (388)
T PRK15057 2 KITISGTG---YVGLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV 77 (388)
T ss_pred EEEEECCC---HHHHHHHHHHHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence 58888887 999999987775 999999 8999999998753221111 11111111 223333
Q ss_pred -EeecCcCChh--------------hhhcCCCCceeecccccCCc---CCCCCc---eeecCCccccCCCCccccccccc
Q 006623 528 -WLVGDDLTGK--------------EQARAPKGTIFIPYTQIPPR---KLRKDC---FYHSTPAMIIPPSLSNMHSCENW 586 (638)
Q Consensus 528 -w~vg~~~~~~--------------~q~~a~~G~~f~~~~~~~~~---~~R~dc---~y~~~~a~~~P~~~~~~~~~e~~ 586 (638)
=.|++.++.+ +...+++|.+++.-|-+||- ++++.. -...+|....|++.- -++-
T Consensus 78 ii~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l~~~~~~~~v~~~PE~l~~G~a~----~d~~ 153 (388)
T PRK15057 78 IIATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKAL----YDNL 153 (388)
T ss_pred EEeCCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHHHHHhhcCcEEECcccccCCccc----cccc
Confidence 2455554332 22345899999999999998 332222 123366666666542 2345
Q ss_pred cCcchhHHH
Q 006623 587 LGRRVMSAW 595 (638)
Q Consensus 587 ~p~~~~~Ac 595 (638)
.|+|+|.+|
T Consensus 154 ~p~rvv~G~ 162 (388)
T PRK15057 154 HPSRIVIGE 162 (388)
T ss_pred CCCEEEEEc
Confidence 688877664
No 430
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=72.48 E-value=11 Score=39.63 Aligned_cols=42 Identities=7% Similarity=0.131 Sum_probs=33.2
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhCC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRIP 508 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~----~v~~--~~~~~~~~l~~~~~ 508 (638)
.+|.++|. | .+|.++++.|.+.|. ++.. |++++.++++++.+
T Consensus 3 ~~IgfIG~-G--~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g 50 (272)
T PRK12491 3 KQIGFIGC-G--NMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYG 50 (272)
T ss_pred CeEEEECc-c--HHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcC
Confidence 46899995 4 999999999998774 5666 77888888876543
No 431
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=72.14 E-value=11 Score=39.38 Aligned_cols=67 Identities=22% Similarity=0.240 Sum_probs=48.6
Q ss_pred eeeecCChhH----HHHHHhcCcCCCcEEEEecccCc--hhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCc
Q 006623 442 IKVVDGSSLA----AAVVVNSLPKTTAHVLLRGTVTA--NKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV 509 (638)
Q Consensus 442 irvv~Gnslt----aavv~~~ip~~~~~V~~~Gatg~--~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~ 509 (638)
+.+.++..-. ++..++.++ ..+.+++.|..|. |=++.|++..||++|+.|+. .-.|=+.+|+.....
T Consensus 81 ~~~~~~~~~~~l~~~~~~~~~~~-~~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~~~~ 154 (254)
T COG1484 81 FEFQPGIDKKALEDLASLVEFFE-RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAAFDE 154 (254)
T ss_pred ccCCcchhHHHHHHHHHHHHHhc-cCCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHhc
Confidence 4444444433 333444667 7778999997753 34899999999999999999 777888888887554
No 432
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=71.81 E-value=5.8 Score=39.97 Aligned_cols=44 Identities=20% Similarity=0.279 Sum_probs=37.8
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (638)
..|+++||.- -||+++|+.|++.|-+|+- |+++.+++|-+|-|.
T Consensus 8 ~~vlvTgaga--GIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~ 53 (245)
T KOG1207|consen 8 VIVLVTGAGA--GIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPS 53 (245)
T ss_pred eEEEeecccc--cccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCc
Confidence 4678888764 8999999999999999998 999999999887543
No 433
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=71.73 E-value=6.1 Score=36.81 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=32.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
|+++|+- .||..+|-.|++.|.+|.+ |++ +++.++++
T Consensus 1 I~I~G~G---aiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~ 39 (151)
T PF02558_consen 1 ILIIGAG---AIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQ 39 (151)
T ss_dssp EEEESTS---HHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHH
T ss_pred CEEECcC---HHHHHHHHHHHHCCCceEEEEccc-cHHhhhhe
Confidence 5788887 8999999999999999999 665 88888766
No 434
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=71.73 E-value=23 Score=38.72 Aligned_cols=96 Identities=18% Similarity=0.135 Sum_probs=66.0
Q ss_pred HHHHHHHHHHcCCcEEEeccc----cccccc-------ccCCceeeecCCC---------CcceeeecCCh---------
Q 006623 399 IEEAILEADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS--------- 449 (638)
Q Consensus 399 I~~Ai~~A~k~G~kv~~LG~l----n~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns--------- 449 (638)
-|.|+ .++|.+++-|+.= .++|.+ .+..-..+.|+|+ ..+++|+.|-+
T Consensus 64 Fe~A~---~~LGg~~i~l~~~~ss~~kgEsl~Dt~rvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL 140 (331)
T PRK02102 64 FEVAA---IDLGAHVTYLGPNDSQLGKKESIEDTARVLGRMYDGIEYRGFKQEIVEELAKYSGVPVWNGLTDEWHPTQML 140 (331)
T ss_pred HHHHH---HHcCCCEEEcCcccccCCCCcCHHHHHHHHhhcCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHH
Confidence 44444 4899999998753 344554 5666677888887 25678887644
Q ss_pred hHHHHHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchh
Q 006623 450 LAAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 498 (638)
Q Consensus 450 ltaavv~~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~ 498 (638)
+=+.++.+.... +..+|+++|... +.+.+..+..|++-|.+|.+-.++
T Consensus 141 aDl~Ti~e~~g~l~g~~va~vGd~~-~~v~~Sl~~~~~~~g~~v~~~~P~ 189 (331)
T PRK02102 141 ADFMTMKEHFGPLKGLKLAYVGDGR-NNMANSLMVGGAKLGMDVRICAPK 189 (331)
T ss_pred HHHHHHHHHhCCCCCCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEECCc
Confidence 123455554432 457999999973 368999999999999999883333
No 435
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=71.55 E-value=3.7 Score=43.06 Aligned_cols=27 Identities=22% Similarity=0.434 Sum_probs=24.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
+|+|+|++| -||+++++.|.++| +|..
T Consensus 2 ~iLVtG~~G--fiGs~l~~~L~~~g-~V~~ 28 (299)
T PRK09987 2 NILLFGKTG--QVGWELQRALAPLG-NLIA 28 (299)
T ss_pred eEEEECCCC--HHHHHHHHHhhccC-CEEE
Confidence 699999999 99999999999988 6654
No 436
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=71.45 E-value=23 Score=38.69 Aligned_cols=87 Identities=21% Similarity=0.247 Sum_probs=61.6
Q ss_pred HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 006623 406 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV 456 (638)
Q Consensus 406 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gnsl---------taavv~ 456 (638)
+.++|.+++.|+.= +++|. |++..-+.+.|++. ..+++|+.|.+= =..++.
T Consensus 64 ~~~LGg~~i~l~~~~ss~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 143 (338)
T PRK02255 64 MTQLGGHAQYLAPGQIQLGGHESLEDTARVLSRLVDIIMARVDRHQTVVELAKYATVPVINGMSDYNHPTQELGDLFTMI 143 (338)
T ss_pred HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCcEEEEecCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 45799999999642 33343 34445566666665 356888887652 245666
Q ss_pred hcCc----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 457 NSLP----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 457 ~~ip----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
+..+ -+..+|.++|..+ .+.+..+..|++-|.+|.+
T Consensus 144 e~~g~g~~l~glkv~~vGD~~--~v~~Sl~~~~~~~g~~v~~ 183 (338)
T PRK02255 144 EHLPEGKKLEDCKVVFVGDAT--QVCVSLMFIATKMGMDFVH 183 (338)
T ss_pred HHhCCCCCCCCCEEEEECCCc--hHHHHHHHHHHhCCCEEEE
Confidence 6653 2356999999975 8999999999999999999
No 437
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=71.35 E-value=25 Score=37.88 Aligned_cols=157 Identities=16% Similarity=0.249 Sum_probs=94.4
Q ss_pred HHHHHHHHHHcCCcEEEecc----cccccc-------cccC-CceeeecCCC---------CcceeeecCCh--h-----
Q 006623 399 IEEAILEADAKGVKVISLGL----LNQGEE-------LNRN-GEIYLERQPN---------KLKIKVVDGSS--L----- 450 (638)
Q Consensus 399 I~~Ai~~A~k~G~kv~~LG~----ln~~e~-------ln~~-g~~~~~k~p~---------~L~irvv~Gns--l----- 450 (638)
.|.||. ++|.+++.|+. +.++|. |++. .-+.+.|+|+ ..+|+|+.+-+ .
T Consensus 63 Fe~A~~---~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ 139 (305)
T PRK00856 63 FELAAK---RLGADVINFSASTSSVSKGETLADTIRTLSAMGADAIVIRHPQSGAARLLAESSDVPVINAGDGSHQHPTQ 139 (305)
T ss_pred HHHHHH---HcCCcEEEeCCCcccCCCCcCHHHHHHHHHhcCCCEEEEeCCChHHHHHHHHHCCCCEEECCCCCCCCcHH
Confidence 455554 78999999975 445444 4556 6677888877 35688988732 1
Q ss_pred ---HHHHHHhcCcC-CCcEEEEeccc--CchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCC-cchhchhhhcccccc
Q 006623 451 ---AAAVVVNSLPK-TTAHVLLRGTV--TANKVANAVASSLCQMGIKVATICKDDYEKLKLRIP-VEAQHNLVLSTSYAA 523 (638)
Q Consensus 451 ---taavv~~~ip~-~~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~-~~~~~~l~~~~~~~~ 523 (638)
=+.++.+.... +..+|+++|.. + -+++..+.++++-|.++.+-..+.|+.- ++. .+...++.++ .+.
T Consensus 140 ~LaDl~Ti~e~~G~l~g~kv~~vGD~~~~--~v~~Sl~~~~~~~g~~~~~~~P~~~~~~--~~~~~~~~~d~~ea--~~~ 213 (305)
T PRK00856 140 ALLDLLTIREEFGRLEGLKVAIVGDIKHS--RVARSNIQALTRLGAEVRLIAPPTLLPE--GMPEYGVHTDLDEV--IED 213 (305)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCCCC--cHHHHHHHHHHHcCCEEEEECCcccCcc--cccceEEECCHHHH--hCC
Confidence 24566665432 45799999886 5 8899999999999999999666665410 111 0111121111 244
Q ss_pred ceEEEeecCcCC-------hhhhhcCCCCceeecccccCCc---CCCCCcee-ecCCcc
Q 006623 524 HKTIWLVGDDLT-------GKEQARAPKGTIFIPYTQIPPR---KLRKDCFY-HSTPAM 571 (638)
Q Consensus 524 ~~i~w~vg~~~~-------~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y-~~~~a~ 571 (638)
+++| ....+-+ .++.++..+ +| |++.+ ..|+||.+ |.+|+.
T Consensus 214 aDvv-yt~~~q~e~~~~~~~~~~~~~~~-----~y-~v~~~ll~~a~~~~~~mHcLPa~ 265 (305)
T PRK00856 214 ADVV-MMLRVQKERMDGGLLPSYEEYKR-----SY-GLTAERLALAKPDAIVMHPGPVN 265 (305)
T ss_pred CCEE-EECCcccccccccchHHHHHHhc-----cC-ccCHHHHhhcCCCCEEECCCCCC
Confidence 5676 4432211 112222222 33 48877 55688875 888864
No 438
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=71.28 E-value=8.6 Score=41.91 Aligned_cols=41 Identities=12% Similarity=0.056 Sum_probs=34.2
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
...|+|.|++| .||.++++.+...|.++.. ++.++.+.+++
T Consensus 190 g~~vlV~Ga~g--~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~ 232 (398)
T TIGR01751 190 GDNVLIWGAAG--GLGSYATQLARAGGGNPVAVVSSPEKAEYCRE 232 (398)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH
Confidence 46999999998 9999999988899999765 67777777754
No 439
>PRK07578 short chain dehydrogenase; Provisional
Probab=71.04 E-value=4.5 Score=39.20 Aligned_cols=27 Identities=26% Similarity=0.389 Sum_probs=24.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
+++++|++| -||+++|+.|+++ .+|.+
T Consensus 2 ~vlItGas~--giG~~la~~l~~~-~~vi~ 28 (199)
T PRK07578 2 KILVIGASG--TIGRAVVAELSKR-HEVIT 28 (199)
T ss_pred eEEEEcCCc--HHHHHHHHHHHhc-CcEEE
Confidence 589999998 9999999999987 78777
No 440
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=71.02 E-value=6.4 Score=40.92 Aligned_cols=39 Identities=15% Similarity=0.237 Sum_probs=34.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+|.++|+ | .+|.++|..|++.|.+|++ |++++++.++++
T Consensus 2 ~I~IiG~-G--~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 42 (304)
T PRK06522 2 KIAILGA-G--AIGGLFGAALAQAGHDVTLVARRGAHLDALNEN 42 (304)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCeEEEEECChHHHHHHHHc
Confidence 5889998 4 9999999999999999998 778888888765
No 441
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=71.02 E-value=11 Score=37.35 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=33.9
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
...|++.|++| .+|.++++.+...|.+|+. ++.++.+.++
T Consensus 105 g~~vlv~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 146 (288)
T smart00829 105 GESVLIHAAAG--GVGQAAIQLAQHLGAEVFATAGSPEKRDFLR 146 (288)
T ss_pred CCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 45899999998 9999999988899999877 6788877774
No 442
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=70.94 E-value=6.6 Score=36.29 Aligned_cols=28 Identities=18% Similarity=0.358 Sum_probs=25.3
Q ss_pred EEEEecccCchhhHHHHHHHHhc-cCcEEEe
Q 006623 465 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT 494 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~-~~~~v~~ 494 (638)
+|.+.|++| |+|+++++.+.+ ++.++.-
T Consensus 2 rV~i~G~~G--rMG~~i~~~i~~~~~~~lv~ 30 (124)
T PF01113_consen 2 RVGIVGASG--RMGRAIAEAILESPGFELVG 30 (124)
T ss_dssp EEEEETTTS--HHHHHHHHHHHHSTTEEEEE
T ss_pred EEEEECCCC--HHHHHHHHHHHhcCCcEEEE
Confidence 589999999 999999999995 8888776
No 443
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=70.51 E-value=15 Score=38.87 Aligned_cols=86 Identities=9% Similarity=0.172 Sum_probs=50.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhh-CCcchhchhhhccccccceEEEeecCcCCh--
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAAHKTIWLVGDDLTG-- 536 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~-- 536 (638)
.+|.++| .| .+|.++|+.|.+.|. +|.. |++++.+.+++. +......++.+. .+.+++| ++--....
T Consensus 7 ~~I~IIG-~G--~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~--~~~aDvV-iiavp~~~~~ 80 (307)
T PRK07502 7 DRVALIG-IG--LIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEA--VKGADLV-ILCVPVGASG 80 (307)
T ss_pred cEEEEEe-eC--HHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHH--hcCCCEE-EECCCHHHHH
Confidence 4799999 56 999999999998885 6776 777777776543 111111111111 1233454 33221111
Q ss_pred ---hhh-hcCCCCceeecccccC
Q 006623 537 ---KEQ-ARAPKGTIFIPYTQIP 555 (638)
Q Consensus 537 ---~~q-~~a~~G~~f~~~~~~~ 555 (638)
++. ..+++|+++++++.+.
T Consensus 81 ~v~~~l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 81 AVAAEIAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHHHHHHhhCCCCCEEEeCccch
Confidence 111 2357888888887644
No 444
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=70.31 E-value=6.5 Score=41.11 Aligned_cols=39 Identities=15% Similarity=0.190 Sum_probs=33.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+|.++| .| .+|.++|+.|.+.|.+|.. ++++..++++++
T Consensus 2 ~I~IIG-~G--~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~ 42 (279)
T PRK07417 2 KIGIVG-LG--LIGGSLGLDLRSLGHTVYGVSRRESTCERAIER 42 (279)
T ss_pred eEEEEe-ec--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC
Confidence 588999 46 9999999999999999988 777778777654
No 445
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=70.17 E-value=4.3 Score=41.93 Aligned_cols=27 Identities=15% Similarity=0.386 Sum_probs=24.2
Q ss_pred EEEecccCchhhHHHHHHHHhccCc-EEEe
Q 006623 466 VLLRGTVTANKVANAVASSLCQMGI-KVAT 494 (638)
Q Consensus 466 V~~~Gatg~~kig~ava~~L~~~~~-~v~~ 494 (638)
|+++|+|| -||+.+|+.|.++|. +|..
T Consensus 1 ilItGatG--~iG~~l~~~L~~~g~~~v~~ 28 (314)
T TIGR02197 1 IIVTGGAG--FIGSNLVKALNERGITDILV 28 (314)
T ss_pred CEEeCCcc--hhhHHHHHHHHHcCCceEEE
Confidence 68999999 999999999999997 5665
No 446
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=70.11 E-value=3.4 Score=44.93 Aligned_cols=30 Identities=27% Similarity=0.306 Sum_probs=27.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+.+|+++|+- =.|.++|.+|+|.|.+|++
T Consensus 17 ~~~dV~IvGaG---~aGl~~A~~L~~~G~~v~v 46 (415)
T PRK07364 17 LTYDVAIVGGG---IVGLTLAAALKDSGLRIAL 46 (415)
T ss_pred cccCEEEECcC---HHHHHHHHHHhcCCCEEEE
Confidence 46789999997 8899999999999999999
No 447
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=69.88 E-value=10 Score=39.73 Aligned_cols=42 Identities=19% Similarity=0.145 Sum_probs=35.3
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
....|++.|++| -||.++++.+..+|.+|.. ++.++.+.+++
T Consensus 138 ~g~~VLI~ga~g--~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~ 181 (325)
T TIGR02825 138 GGETVMVNAAAG--AVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK 181 (325)
T ss_pred CCCEEEEeCCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 346899999998 9999999988899999876 77888887754
No 448
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=69.53 E-value=7.2 Score=41.94 Aligned_cols=43 Identities=28% Similarity=0.356 Sum_probs=32.7
Q ss_pred CCCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhh
Q 006623 461 KTTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~ 506 (638)
|...+|.++|| | .||+++|..|+.+|+ ++.| +++++.+-...+
T Consensus 4 ~~~~ki~iiGa-G--~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~D 50 (315)
T PRK00066 4 KQHNKVVLVGD-G--AVGSSYAYALVNQGIADELVIIDINKEKAEGDAMD 50 (315)
T ss_pred CCCCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHH
Confidence 33469999999 8 999999999998888 5666 666665544443
No 449
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=69.52 E-value=6.6 Score=41.49 Aligned_cols=36 Identities=14% Similarity=0.186 Sum_probs=32.3
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (638)
++|.++|+- .+|+.+|..|++.|.+|++ ++++..++
T Consensus 6 ~~V~ViGaG---~mG~~iA~~~a~~G~~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAG---QMGAGIAEVCARAGVDVLVFETTEELATA 43 (286)
T ss_pred cEEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 589999995 9999999999999999999 77787776
No 450
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=69.46 E-value=30 Score=39.14 Aligned_cols=99 Identities=17% Similarity=0.288 Sum_probs=68.2
Q ss_pred HHHHHHHHHHcCCcEEEecc-----cccccc-------cccCCceeeecCCC---------CcceeeecCCh--------
Q 006623 399 IEEAILEADAKGVKVISLGL-----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS-------- 449 (638)
Q Consensus 399 I~~Ai~~A~k~G~kv~~LG~-----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns-------- 449 (638)
-|.|+ .++|.+++.|+. +.++|. |++..-+.+.|+|. ..+|+|+.|-+
T Consensus 144 FE~A~---~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y~D~IviR~~~~~~~~e~A~~s~vPVINAgdg~~~HPtQ 220 (429)
T PRK11891 144 FGAAF---CRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGYVDALVIRHPEQGSVAEFARATNLPVINGGDGPGEHPSQ 220 (429)
T ss_pred HHHHH---HHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHhCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHH
Confidence 45554 489999999954 344554 45667788888876 46799998643
Q ss_pred --hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhH
Q 006623 450 --LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDY 500 (638)
Q Consensus 450 --ltaavv~~~ip-----~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~~~~~~~ 500 (638)
+=..++.+... -+..+|+++|...-+.+++..+..||+. |.+|.+-..+.|
T Consensus 221 aLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~ 279 (429)
T PRK11891 221 ALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTL 279 (429)
T ss_pred HHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCcc
Confidence 22556666542 2357999999972128899999999976 999988333333
No 451
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=69.46 E-value=11 Score=39.02 Aligned_cols=44 Identities=23% Similarity=0.322 Sum_probs=34.5
Q ss_pred CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 459 ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
+.++...|++.|++| -+|.++++.+..+|.++.. +++++.+.++
T Consensus 142 ~~~~~~~vlI~g~~g--~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~ 187 (323)
T TIGR02823 142 LTPEDGPVLVTGATG--GVGSLAVAILSKLGYEVVASTGKAEEEDYLK 187 (323)
T ss_pred CCCCCceEEEEcCCc--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 333434899999998 9999999999999999876 5666666664
No 452
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=69.39 E-value=15 Score=38.27 Aligned_cols=54 Identities=13% Similarity=0.009 Sum_probs=39.6
Q ss_pred hHHHHHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 450 LAAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 450 ltaavv~~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
.||...++.+.. ....|++.|++| .+|.+.++.+.++|.+++. ++.++.+.+++
T Consensus 149 ~~a~~~~~~~~~~~~~~vlI~g~~g--~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~ 205 (334)
T PRK13771 149 GMVYRGLRRAGVKKGETVLVTGAGG--GVGIHAIQVAKALGAKVIAVTSSESKAKIVSK 205 (334)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCc--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 334444444522 345799999988 9999999999999999876 77777777643
No 453
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=69.18 E-value=9 Score=41.69 Aligned_cols=118 Identities=17% Similarity=0.182 Sum_probs=78.0
Q ss_pred cccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006623 423 EELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (638)
Q Consensus 423 e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~ 500 (638)
|.-||+.++...=-|. -...+|.+.|.- -+|.--|+.....|-+|++ +|-+|+
T Consensus 150 ek~~GG~GvllgGvpG----------------------V~~~kv~iiGGG---vvgtnaAkiA~glgA~Vtild~n~~rl 204 (371)
T COG0686 150 EKTNGGKGVLLGGVPG----------------------VLPAKVVVLGGG---VVGTNAAKIAIGLGADVTILDLNIDRL 204 (371)
T ss_pred HhccCCceeEecCCCC----------------------CCCccEEEECCc---cccchHHHHHhccCCeeEEEecCHHHH
Confidence 3367777666665555 134578888876 7899999999999999999 999999
Q ss_pred HHHHhhCCcc------hhchhhhccccccceEEEeecC----------cCChhhhhcCCCCceeecccccCCc----CCC
Q 006623 501 EKLKLRIPVE------AQHNLVLSTSYAAHKTIWLVGD----------DLTGKEQARAPKGTIFIPYTQIPPR----KLR 560 (638)
Q Consensus 501 ~~l~~~~~~~------~~~~l~~~~~~~~~~i~w~vg~----------~~~~~~q~~a~~G~~f~~~~~~~~~----~~R 560 (638)
..|...-... +..++.+. +..+|+ ++|. -++.|.++.|+||++.+|++ ++.- ..|
T Consensus 205 ~~ldd~f~~rv~~~~st~~~iee~--v~~aDl--vIgaVLIpgakaPkLvt~e~vk~MkpGsVivDVA-iDqGGc~Et~~ 279 (371)
T COG0686 205 RQLDDLFGGRVHTLYSTPSNIEEA--VKKADL--VIGAVLIPGAKAPKLVTREMVKQMKPGSVIVDVA-IDQGGCFETSH 279 (371)
T ss_pred hhhhHhhCceeEEEEcCHHHHHHH--hhhccE--EEEEEEecCCCCceehhHHHHHhcCCCcEEEEEE-EcCCCceeccc
Confidence 9887763322 22232211 122233 2232 35677799999999999999 6654 223
Q ss_pred ----CCceeecCCc
Q 006623 561 ----KDCFYHSTPA 570 (638)
Q Consensus 561 ----~dc~y~~~~a 570 (638)
+|=+|.+-+.
T Consensus 280 ~TTh~~PtY~~~gv 293 (371)
T COG0686 280 PTTHDDPTYEVDGV 293 (371)
T ss_pred cccCCCCceeecCE
Confidence 5555655554
No 454
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=68.82 E-value=11 Score=39.26 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=33.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHH
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~ 504 (638)
...|++.|+.| .+|.++++.+... |.+|.. +++++.+.++
T Consensus 149 g~~vlV~ga~g--~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~ 191 (336)
T TIGR02817 149 KRALLIIGGAG--GVGSILIQLARQLTGLTVIATASRPESQEWVL 191 (336)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH
Confidence 56899999998 9999998887776 999877 6677777774
No 455
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=68.74 E-value=11 Score=40.91 Aligned_cols=113 Identities=14% Similarity=0.076 Sum_probs=78.9
Q ss_pred eEEEeecccCcccceeEEeeccCc-ccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCC
Q 006623 361 TFVSESNTLDKLKLQTWVVPRYIV-QYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439 (638)
Q Consensus 361 ~f~~~~~~~~~~~~~~w~~pr~~~-~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~ 439 (638)
.=.+..-+..++..--||+--.|+ .|.+-... ++.| ++-.. -.+.
T Consensus 80 V~~Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~~-------------------------~l~K---vd~~~-----~pl~- 125 (340)
T COG2130 80 VAKVVASNHPGFQPGDIVVGVSGWQEYAISDGE-------------------------GLRK---LDPSP-----APLS- 125 (340)
T ss_pred eEEEEecCCCCCCCCCEEEecccceEEEeechh-------------------------hcee---cCCCC-----CCcc-
Confidence 334555566788888999999988 56552221 1222 21111 0111
Q ss_pred cceeeecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006623 440 LKIKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (638)
Q Consensus 440 L~irvv~Gnsltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~ 509 (638)
--.-+.-..++||+..+..| ||.-.+|++.||+| -||+++.+.---+|-+|.= -+.|+..-+.+++.-
T Consensus 126 ~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaG--aVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf 197 (340)
T COG2130 126 AYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAG--AVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF 197 (340)
T ss_pred hHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEeccc--ccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC
Confidence 23667778899999999999 77888999999999 9999999877678888776 677777777776554
No 456
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=68.60 E-value=6.3 Score=46.28 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=38.8
Q ss_pred CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 459 ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+++.+++|.++|.. .+|+.+|+.|.++|+++++ .|+++.++++++
T Consensus 396 ~~~~~~~vII~G~G---r~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~ 442 (621)
T PRK03562 396 IDEQQPRVIIAGFG---RFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF 442 (621)
T ss_pred cccccCcEEEEecC---hHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc
Confidence 34446789999998 9999999999999999988 888899988764
No 457
>KOG0068 consensus D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily [Amino acid transport and metabolism]
Probab=68.54 E-value=20 Score=39.55 Aligned_cols=143 Identities=20% Similarity=0.217 Sum_probs=87.4
Q ss_pred HHHHHHHcCCcEEEec--ccccc--cccccCCceeeecCCCCcceeeecCChhHHHH--------HHhcCcCC-------
Q 006623 402 AILEADAKGVKVISLG--LLNQG--EELNRNGEIYLERQPNKLKIKVVDGSSLAAAV--------VVNSLPKT------- 462 (638)
Q Consensus 402 Ai~~A~k~G~kv~~LG--~ln~~--e~ln~~g~~~~~k~p~~L~irvv~Gnsltaav--------v~~~ip~~------- 462 (638)
=.++|-+.|.||+|+. +.|+. +.--.+| +.|.+-|. +||..||= .-++|++.
T Consensus 62 dvl~aa~~~lkvVgrag~G~dNVDL~AAte~g-i~Vvn~P~--------~Ns~saAEltigli~SLaR~i~~A~~s~k~g 132 (406)
T KOG0068|consen 62 DVLEAAAGGLKVVGRAGIGVDNVDLKAATENG-ILVVNTPT--------ANSRSAAELTIGLILSLARQIGQASASMKEG 132 (406)
T ss_pred HHHHhhcCCeEEEEecccCccccChhhHHhCC-eEEEeCCC--------CChHHHHHHHHHHHHHHhhhcchhheeeecC
Confidence 3567788899999985 34442 1112233 66666666 99998873 34666661
Q ss_pred -------------CcEEEEecccCchhhHHHHHHHHhccCcEEEe----cchhhHHHHHhh-CCcchhchhhh-cc--cc
Q 006623 463 -------------TAHVLLRGTVTANKVANAVASSLCQMGIKVAT----ICKDDYEKLKLR-IPVEAQHNLVL-ST--SY 521 (638)
Q Consensus 463 -------------~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~----~~~~~~~~l~~~-~~~~~~~~l~~-~~--~~ 521 (638)
-+++.+.|- | +||+-+|.-+--.|-+|+. ...++.+..-=+ ...+...+..+ ++ .|
T Consensus 133 ~wnr~~~~G~el~GKTLgvlG~-G--rIGseVA~r~k~~gm~vI~~dpi~~~~~~~a~gvq~vsl~Eil~~ADFitlH~P 209 (406)
T KOG0068|consen 133 KWNRVKYLGWELRGKTLGVLGL-G--RIGSEVAVRAKAMGMHVIGYDPITPMALAEAFGVQLVSLEEILPKADFITLHVP 209 (406)
T ss_pred ceeecceeeeEEeccEEEEeec-c--cchHHHHHHHHhcCceEEeecCCCchHHHHhccceeeeHHHHHhhcCEEEEccC
Confidence 456777774 4 9999999999899999988 233333322111 11111111111 11 01
Q ss_pred ccceEEEeecCcCChhhhhcCCCCceeecccc---cCCc-CCC
Q 006623 522 AAHKTIWLVGDDLTGKEQARAPKGTIFIPYTQ---IPPR-KLR 560 (638)
Q Consensus 522 ~~~~i~w~vg~~~~~~~q~~a~~G~~f~~~~~---~~~~-~~R 560 (638)
-.. .--+.++++...+|+||+..+-+|| ++.+ -+|
T Consensus 210 LtP----~T~~lin~~tfA~mKkGVriIN~aRGGvVDe~ALv~ 248 (406)
T KOG0068|consen 210 LTP----STEKLLNDETFAKMKKGVRIINVARGGVVDEPALVR 248 (406)
T ss_pred CCc----chhhccCHHHHHHhhCCcEEEEecCCceechHHHHH
Confidence 111 1245578899999999999999999 6666 444
No 458
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=68.36 E-value=6.5 Score=41.28 Aligned_cols=28 Identities=25% Similarity=0.409 Sum_probs=26.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
+|+++|++| -||++++++|.++|..+..
T Consensus 2 riLI~GasG--~lG~~l~~~l~~~~~~v~~ 29 (286)
T PF04321_consen 2 RILITGASG--FLGSALARALKERGYEVIA 29 (286)
T ss_dssp EEEEETTTS--HHHHHHHHHHTTTSEEEEE
T ss_pred EEEEECCCC--HHHHHHHHHHhhCCCEEEE
Confidence 689999999 9999999999999988877
No 459
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=68.22 E-value=7 Score=44.45 Aligned_cols=108 Identities=13% Similarity=0.124 Sum_probs=64.2
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-CCc---chhchhhhcc-ccccceEEEee---cCcC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPV---EAQHNLVLST-SYAAHKTIWLV---GDDL 534 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~-~~~---~~~~~l~~~~-~~~~~~i~w~v---g~~~ 534 (638)
+|-++|-- .+|+++|+.|.+.|.+|.+ |++++.++++++ .+. ....++.+.. +.+.+++|++. |+.+
T Consensus 1 ~IG~IGLG---~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v 77 (467)
T TIGR00873 1 DIGVIGLA---VMGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPV 77 (467)
T ss_pred CEEEEeeH---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHH
Confidence 35677755 8999999999999999999 899999988875 211 1111212111 11222333343 1111
Q ss_pred Ch--hhh-hcCCCCceeecccccCCc-------CCC-CCceeecCCccccCC
Q 006623 535 TG--KEQ-ARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP 575 (638)
Q Consensus 535 ~~--~~q-~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~ 575 (638)
++ ++. ...++|.+++|.+-..+. +++ +.+.|.+.|++-=|.
T Consensus 78 ~~Vi~~l~~~L~~g~iIID~gns~~~~t~~~~~~l~~~gi~fvdapVsGG~~ 129 (467)
T TIGR00873 78 DAVINQLLPLLEKGDIIIDGGNSHYPDTERRYKELKAKGILFVGSGVSGGEE 129 (467)
T ss_pred HHHHHHHHhhCCCCCEEEECCCcCHHHHHHHHHHHHhcCCEEEcCCCCCCHH
Confidence 11 122 235789999999975443 222 456688877765443
No 460
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=67.99 E-value=6.4 Score=41.10 Aligned_cols=44 Identities=25% Similarity=0.320 Sum_probs=33.6
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhCC
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRIP 508 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~~~ 508 (638)
-+.|+++|+.| -||++.+..|.++|++++. .+. |...+||+-.|
T Consensus 5 GKna~vtggag--GIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p 53 (261)
T KOG4169|consen 5 GKNALVTGGAG--GIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINP 53 (261)
T ss_pred CceEEEecCCc--hhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCC
Confidence 36788999987 9999999999999999998 333 34445555444
No 461
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=67.98 E-value=13 Score=37.84 Aligned_cols=40 Identities=18% Similarity=0.161 Sum_probs=34.1
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
.+.|++.|++| .+|.++++.+..+|.++.. ++.++.+.++
T Consensus 145 ~~~vli~g~~~--~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 186 (328)
T cd08268 145 GDSVLITAASS--SVGLAAIQIANAAGATVIATTRTSEKRDALL 186 (328)
T ss_pred CCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 46899999987 9999999999999999888 6777777664
No 462
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=67.76 E-value=14 Score=39.97 Aligned_cols=101 Identities=11% Similarity=0.147 Sum_probs=60.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEee-------cCc
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV-------GDD 533 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v-------g~~ 533 (638)
..++|-++|-- .||+++|+.|. --|.+|...++..-+.-..+...+. .+|.+.. +.+|+|.+. -..
T Consensus 144 ~gktvGIiG~G---~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~-~~l~ell--~~sDvv~lh~plt~~T~~l 217 (323)
T PRK15409 144 HHKTLGIVGMG---RIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARY-CDLDTLL--QESDFVCIILPLTDETHHL 217 (323)
T ss_pred CCCEEEEEccc---HHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEe-cCHHHHH--HhCCEEEEeCCCChHHhhc
Confidence 56789999985 99999999986 7888988722111011011111111 1222222 223444221 134
Q ss_pred CChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006623 534 LTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 568 (638)
Q Consensus 534 ~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~ 568 (638)
++.++..+|++|+.||-++| |+.+ +++ -|++..+-
T Consensus 218 i~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf~~EP 267 (323)
T PRK15409 218 FGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267 (323)
T ss_pred cCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecCCCCC
Confidence 66789999999999999999 5544 333 57776664
No 463
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=67.74 E-value=5.9 Score=44.17 Aligned_cols=95 Identities=21% Similarity=0.277 Sum_probs=56.7
Q ss_pred ceeEEeeccCc-ccccchhhHHHHHHHHHHHHHHHHcCCcEEEe--cccccccccccCCceeeecCCCCcceeeecCChh
Q 006623 374 LQTWVVPRYIV-QYNLPWRREAINSLIEEAILEADAKGVKVISL--GLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSL 450 (638)
Q Consensus 374 ~~~w~~pr~~~-~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~L--G~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsl 450 (638)
...-++|.-+- -|.-|--.+. +..-.+.|+.|+.= |-|-.+| .|. -|-|+ .+ -
T Consensus 117 ~pvvi~Pamn~~m~~~p~~~~N--------l~~L~~~G~~ii~P~~g~la~~~--~g~-----gr~~~-~~--------~ 172 (399)
T PRK05579 117 APVLVAPAMNTQMWENPATQRN--------LATLRSRGVEIIGPASGRLACGD--VGP-----GRMAE-PE--------E 172 (399)
T ss_pred CCEEEEeCCChhHcCCHHHHHH--------HHHHHHCCCEEECCCCccccCCC--cCC-----CCCCC-HH--------H
Confidence 35667776655 3444443333 33344579999843 2232221 222 24555 21 1
Q ss_pred HHHHHHhcCc-C--CCcEEEEecc----------------cCchhhHHHHHHHHhccCcEEEe
Q 006623 451 AAAVVVNSLP-K--TTAHVLLRGT----------------VTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 451 taavv~~~ip-~--~~~~V~~~Ga----------------tg~~kig~ava~~L~~~~~~v~~ 494 (638)
.+..+.+.+. + ..+.|+++|+ +| ++|+++|+.|.++|.+|++
T Consensus 173 I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG--~~G~aiA~~l~~~Ga~V~~ 233 (399)
T PRK05579 173 IVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSG--KMGYALARAAARRGADVTL 233 (399)
T ss_pred HHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcc--hHHHHHHHHHHHCCCEEEE
Confidence 2233333332 2 4578999998 77 9999999999999999998
No 464
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=67.54 E-value=12 Score=40.90 Aligned_cols=77 Identities=10% Similarity=0.044 Sum_probs=43.7
Q ss_pred HHHHHHHHhccCcEEEe--cchhhHH-----HHHhhCCcchhchhhhccccccceEE--EeecCcCC----hhhhhcCCC
Q 006623 478 ANAVASSLCQMGIKVAT--ICKDDYE-----KLKLRIPVEAQHNLVLSTSYAAHKTI--WLVGDDLT----GKEQARAPK 544 (638)
Q Consensus 478 g~ava~~L~~~~~~v~~--~~~~~~~-----~l~~~~~~~~~~~l~~~~~~~~~~i~--w~vg~~~~----~~~q~~a~~ 544 (638)
|+++|+-|++.|.+|.+ |++++.+ .+.+. +.....+..++. +.++++ ++..+... ..-...+++
T Consensus 32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~Laea-GA~~AaS~aEAA--a~ADVVIL~LPd~aaV~eVl~GLaa~L~~ 108 (341)
T TIGR01724 32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDA-GVKVVSDDKEAA--KHGEIHVLFTPFGKGTFSIARTIIEHVPE 108 (341)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHC-CCeecCCHHHHH--hCCCEEEEecCCHHHHHHHHHHHHhcCCC
Confidence 89999999999999999 5665442 34433 111111111221 222333 23211111 111234689
Q ss_pred CceeecccccCCc
Q 006623 545 GTIFIPYTQIPPR 557 (638)
Q Consensus 545 G~~f~~~~~~~~~ 557 (638)
|+++|+.|-++|.
T Consensus 109 GaIVID~STIsP~ 121 (341)
T TIGR01724 109 NAVICNTCTVSPV 121 (341)
T ss_pred CCEEEECCCCCHH
Confidence 9999999998876
No 465
>PRK04148 hypothetical protein; Provisional
Probab=67.42 E-value=15 Score=35.15 Aligned_cols=68 Identities=22% Similarity=0.141 Sum_probs=48.0
Q ss_pred HhcCcCC-CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhcc-c-cccceEE
Q 006623 456 VNSLPKT-TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-S-YAAHKTI 527 (638)
Q Consensus 456 ~~~ip~~-~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~-~-~~~~~i~ 527 (638)
.+.++++ ..+|+.+|.-. |.++|..|.+.|.+|+. .+++..++.++....-...++.+.+ + |++++.+
T Consensus 9 ~~~~~~~~~~kileIG~Gf----G~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~li 81 (134)
T PRK04148 9 AENYEKGKNKKIVELGIGF----YFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLI 81 (134)
T ss_pred HHhcccccCCEEEEEEecC----CHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEE
Confidence 3444443 36789988776 78899999999999999 7778777777765555555555444 3 6666665
No 466
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=67.39 E-value=8.7 Score=40.58 Aligned_cols=40 Identities=13% Similarity=0.287 Sum_probs=34.9
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
++|.++|+. .+|+++|..|.+.|.+|++ +++++.++++++
T Consensus 5 ~~I~vIGaG---~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 5 QNLAIIGAG---TMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred cEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 579999996 9999999999999999998 778888877764
No 467
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=67.22 E-value=10 Score=39.11 Aligned_cols=88 Identities=15% Similarity=0.113 Sum_probs=54.6
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchh-----chhh----hccccccceEE-Ee
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-----HNLV----LSTSYAAHKTI-WL 529 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~-----~~l~----~~~~~~~~~i~-w~ 529 (638)
....|++.|++| .||.++++.+...|.++.. ++.++.+.+++. +.+.. .++. +.+.-+..+++ =.
T Consensus 139 ~g~~vlI~g~~g--~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~ 215 (324)
T cd08292 139 PGQWLIQNAAGG--AVGKLVAMLAAARGINVINLVRRDAGVAELRAL-GIGPVVSTEQPGWQDKVREAAGGAPISVALDS 215 (324)
T ss_pred CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhc-CCCEEEcCCCchHHHHHHHHhCCCCCcEEEEC
Confidence 356899999998 9999999988899999877 677777777653 22111 1111 11111112333 23
Q ss_pred ecCcCChhhhhcCCCCceeeccc
Q 006623 530 VGDDLTGKEQARAPKGTIFIPYT 552 (638)
Q Consensus 530 vg~~~~~~~q~~a~~G~~f~~~~ 552 (638)
+|.....+-.+.++++-.|+.+.
T Consensus 216 ~g~~~~~~~~~~l~~~g~~v~~g 238 (324)
T cd08292 216 VGGKLAGELLSLLGEGGTLVSFG 238 (324)
T ss_pred CCChhHHHHHHhhcCCcEEEEEe
Confidence 34444455556677777888876
No 468
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=67.16 E-value=9.1 Score=40.96 Aligned_cols=106 Identities=21% Similarity=0.193 Sum_probs=65.6
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCCcchhchhhhccccccceEEEeecC------cCC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGD------DLT 535 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~-~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~------~~~ 535 (638)
+|.++|-- ..|...|.-|.++|.+|.. |++++ -+.++.+-.....+. .+.. .+++.|+-.|.+ .+.
T Consensus 2 kIafIGLG---~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~-~eaa-~~aDvVitmv~~~~~V~~V~~ 76 (286)
T COG2084 2 KIAFIGLG---IMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASP-AEAA-AEADVVITMLPDDAAVRAVLF 76 (286)
T ss_pred eEEEEcCc---hhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCH-HHHH-HhCCEEEEecCCHHHHHHHHh
Confidence 57888865 8999999999999999999 88787 555555422222221 1111 011111112221 222
Q ss_pred h--hhhhcCCCCceeecccccCCc---CCC-----CCceeecCCccccCC
Q 006623 536 G--KEQARAPKGTIFIPYTQIPPR---KLR-----KDCFYHSTPAMIIPP 575 (638)
Q Consensus 536 ~--~~q~~a~~G~~f~~~~~~~~~---~~R-----~dc~y~~~~a~~~P~ 575 (638)
. .=...++||++|||.|-++|. ++. +-+.|.+-|++--+.
T Consensus 77 g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~~ 126 (286)
T COG2084 77 GENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGVP 126 (286)
T ss_pred CccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCch
Confidence 1 122357899999999999998 221 667788888875333
No 469
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=67.10 E-value=7.1 Score=41.40 Aligned_cols=94 Identities=18% Similarity=0.207 Sum_probs=50.9
Q ss_pred cEEEEecccCchhhHHHHHHHHh---ccCcEEEe----cchhhHHHHHhhCCcchhchhhhccccccceEEEeecCcCCh
Q 006623 464 AHVLLRGTVTANKVANAVASSLC---QMGIKVAT----ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVGDDLTG 536 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~---~~~~~v~~----~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~ 536 (638)
+-++++|+.+ -+|.+||.-|- .++++.++ |+.++-|..-..+....-..=++++ +| +|| +++
T Consensus 4 KvalITGanS--glGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~------yv-lvD--~sN 72 (341)
T KOG1478|consen 4 KVALITGANS--GLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVT------YV-LVD--VSN 72 (341)
T ss_pred eEEEEecCCC--cccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEE------EE-EEe--hhh
Confidence 4567789985 99999998887 23334444 8988888654444332221112222 32 331 010
Q ss_pred hhhhcCCCCceeecccccCCcCCCCCceeecCCccccCC
Q 006623 537 KEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPP 575 (638)
Q Consensus 537 ~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~ 575 (638)
. | + +|--+..+..+=-|-||.|...++|..|+
T Consensus 73 m-~-S-----v~~A~~di~~rf~~ld~iylNAg~~~~~g 104 (341)
T KOG1478|consen 73 M-Q-S-----VFRASKDIKQRFQRLDYIYLNAGIMPNPG 104 (341)
T ss_pred H-H-H-----HHHHHHHHHHHhhhccEEEEccccCCCCc
Confidence 0 0 0 00000001111234899999999999998
No 470
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism]
Probab=66.83 E-value=8.2 Score=43.14 Aligned_cols=46 Identities=17% Similarity=0.181 Sum_probs=35.9
Q ss_pred cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 458 ~ip~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
.-..+++.|.++||. -.|+|+|-.|+|+|.||.+ |+-.+=+++-.|
T Consensus 40 ~~~~~~~DvIIVGAG---V~GsaLa~~L~kdGRrVhVIERDl~EPdRivGE 87 (509)
T KOG1298|consen 40 ARNDGAADVIIVGAG---VAGSALAYALAKDGRRVHVIERDLSEPDRIVGE 87 (509)
T ss_pred hccCCcccEEEECCc---chHHHHHHHHhhCCcEEEEEecccccchHHHHH
Confidence 333457789999998 8899999999999999999 665555544444
No 471
>PLN02503 fatty acyl-CoA reductase 2
Probab=66.80 E-value=12 Score=44.18 Aligned_cols=26 Identities=12% Similarity=0.233 Sum_probs=23.4
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccC
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMG 489 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~ 489 (638)
..+.|||+|+|| =||+++++.|.+.+
T Consensus 118 ~~k~VlVTGaTG--FLGk~LlekLLr~~ 143 (605)
T PLN02503 118 RGKNFLITGATG--FLAKVLIEKILRTN 143 (605)
T ss_pred cCCEEEEcCCch--HHHHHHHHHHHHhC
Confidence 588999999999 99999999998654
No 472
>PLN02342 ornithine carbamoyltransferase
Probab=66.63 E-value=77 Score=34.96 Aligned_cols=93 Identities=16% Similarity=0.245 Sum_probs=63.3
Q ss_pred HHHcCCcEEEecccc----ccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006623 406 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 456 (638)
Q Consensus 406 A~k~G~kv~~LG~ln----~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~ 456 (638)
+.++|.+++.|+.=+ ++|.+ ....-+.+.|+|+ ...+.|+.+-+ +=..++.
T Consensus 107 ~~~LGg~~i~l~~~~ss~~kGESl~DTarvLs~y~D~IviR~~~~~~~~~la~~~~vPVINA~~~~~HPtQaLaDl~Ti~ 186 (348)
T PLN02342 107 FFLLGGHALYLGPDDIQLGKREETRDIARVLSRYNDIIMARVFAHQDVLDLAEYSSVPVINGLTDYNHPCQIMADALTII 186 (348)
T ss_pred HHHcCCcEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEeCCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 578999999996433 44543 4455567778876 24577777644 1134555
Q ss_pred hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH
Q 006623 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY 500 (638)
Q Consensus 457 ~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~ 500 (638)
+.... +..+|.++|... .+.+..+..|++-|.+|.+-..+.|
T Consensus 187 e~~G~l~glkva~vGD~~--nva~Sli~~~~~~G~~v~~~~P~~~ 229 (348)
T PLN02342 187 EHIGRLEGTKVVYVGDGN--NIVHSWLLLAAVLPFHFVCACPKGY 229 (348)
T ss_pred HHhCCcCCCEEEEECCCc--hhHHHHHHHHHHcCCEEEEECCccc
Confidence 54432 457999999975 7999999999999999998333333
No 473
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=66.43 E-value=23 Score=35.89 Aligned_cols=42 Identities=17% Similarity=0.189 Sum_probs=34.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
....|++.|++| .+|.++++.+...|.+|.. ++.++.+.+++
T Consensus 139 ~~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 182 (323)
T cd08241 139 PGETVLVLGAAG--GVGLAAVQLAKALGARVIAAASSEEKLALARA 182 (323)
T ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHH
Confidence 356899999987 9999999999999999887 66777776643
No 474
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=66.27 E-value=8.2 Score=45.28 Aligned_cols=30 Identities=13% Similarity=0.159 Sum_probs=27.0
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
..+|+|+|++| -||+++++.|+++|.+|..
T Consensus 380 ~mkiLVtGa~G--~iG~~l~~~L~~~g~~v~~ 409 (668)
T PLN02260 380 SLKFLIYGRTG--WIGGLLGKLCEKQGIAYEY 409 (668)
T ss_pred CceEEEECCCc--hHHHHHHHHHHhCCCeEEe
Confidence 45799999999 9999999999999999843
No 475
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=66.27 E-value=8.6 Score=40.39 Aligned_cols=36 Identities=14% Similarity=0.138 Sum_probs=31.5
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~ 502 (638)
++|.++|+- .+|+++|..|++.|.+|.+ ++.++.++
T Consensus 5 ~~V~vIG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 42 (295)
T PLN02545 5 KKVGVVGAG---QMGSGIAQLAAAAGMDVWLLDSDPAALSR 42 (295)
T ss_pred CEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 569999986 9999999999999999999 77777664
No 476
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=66.12 E-value=5.8 Score=36.75 Aligned_cols=36 Identities=28% Similarity=0.393 Sum_probs=27.8
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcE-EEecchhhHH
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIK-VATICKDDYE 501 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~~~~~~~~ 501 (638)
.++|+++|+. .+|+.+|..|++.|++ +++-+.+..+
T Consensus 2 ~~~v~iiG~G---~vGs~va~~L~~~Gv~~i~lvD~d~v~ 38 (135)
T PF00899_consen 2 NKRVLIIGAG---GVGSEVAKNLARSGVGKITLVDDDIVE 38 (135)
T ss_dssp T-EEEEESTS---HHHHHHHHHHHHHTTSEEEEEESSBB-
T ss_pred CCEEEEECcC---HHHHHHHHHHHHhCCCceeecCCccee
Confidence 4789999998 7999999999999995 5555555443
No 477
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=65.83 E-value=13 Score=41.97 Aligned_cols=36 Identities=25% Similarity=0.488 Sum_probs=29.3
Q ss_pred HhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 456 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 456 ~~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
++..|+ ..++|++.|.- +.|+|+|++|.++|.+|+.
T Consensus 7 ~~~~~~~~~~~v~v~G~G---~sG~a~a~~L~~~G~~V~~ 43 (473)
T PRK00141 7 LSALPQELSGRVLVAGAG---VSGRGIAAMLSELGCDVVV 43 (473)
T ss_pred hhhcccccCCeEEEEccC---HHHHHHHHHHHHCCCEEEE
Confidence 344454 45679999955 8899999999999999999
No 478
>cd03510 Rhizobitoxine-FADS-like This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins. Dihydrorhizobitoxine desaturase is reported to be involved in the final step of rhizobitoxine biosynthesis. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.
Probab=65.65 E-value=22 Score=34.92 Aligned_cols=83 Identities=23% Similarity=0.243 Sum_probs=40.6
Q ss_pred hhhhccccCccCcCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhccCCceecccc---
Q 006623 155 LYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMW--- 231 (638)
Q Consensus 155 Ly~r~HkvHHss~~p~~~ta~~~hplE~ll~~~~f~iPll~~~llg~~s~~~i~~y~i~~~~~~~~~Hsg~e~~P~~--- 231 (638)
.|++.|..||..... +-.-... ....+..+|+++. +..+..+.+...|.+.+-....
T Consensus 72 ~~r~~H~~HH~~~~~-~~Dpd~~------~~~~~W~~P~~~~-------------~~~~~~~~~~~eH~~~~~~~~~~~~ 131 (175)
T cd03510 72 AYRRSHLKHHRHLGT-EDDPDLA------LYLLLWLVPLLTV-------------FPLIGRIREIAEHAGVPADEDPDAR 131 (175)
T ss_pred HHHHHHHHHhCccCC-CCCCcHH------HHHHHHHHHHHHH-------------HHHHHHHHHHHhccCCCCCCcchhh
Confidence 577889999998643 2111111 1112344666532 1222334455678765421110
Q ss_pred --cccccCCc-ccccC--CchhhhhhhcCCC
Q 006623 232 --LFTVFPPL-KFLMY--TPSYHSLHHTQFR 257 (638)
Q Consensus 232 --~~~~lp~L-~~li~--tp~~H~lHH~~~~ 257 (638)
-....+++ ++++. .-.||-.||....
T Consensus 132 ~tr~~~~~~~~r~l~~p~~~~YH~eHHl~P~ 162 (175)
T cd03510 132 NTRTTFGGWIERLLFAPHNINYHLEHHLFPA 162 (175)
T ss_pred cCccccccHHHHHHHcccCCcHHHHHhCCcC
Confidence 01112233 33332 5679999998754
No 479
>PLN02712 arogenate dehydrogenase
Probab=64.29 E-value=12 Score=44.49 Aligned_cols=30 Identities=13% Similarity=0.285 Sum_probs=26.8
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
...+|.++| .| .+|.++|+.|.+.|.+|..
T Consensus 368 ~~~kIgIIG-lG--~mG~slA~~L~~~G~~V~~ 397 (667)
T PLN02712 368 SKLKIAIVG-FG--NFGQFLAKTMVKQGHTVLA 397 (667)
T ss_pred CCCEEEEEe-cC--HHHHHHHHHHHHCcCEEEE
Confidence 357899999 67 9999999999999999888
No 480
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=64.26 E-value=6.3 Score=41.82 Aligned_cols=27 Identities=15% Similarity=0.215 Sum_probs=24.0
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEE
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVA 493 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~ 493 (638)
+|+|+|++| =||+.+++.|.++|.++.
T Consensus 2 kilITGgtG--~iG~~l~~~L~~~g~~~v 28 (352)
T PRK10084 2 KILVTGGAG--FIGSAVVRHIINNTQDSV 28 (352)
T ss_pred eEEEECCCc--HHhHHHHHHHHHhCCCeE
Confidence 589999999 999999999999887643
No 481
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=64.16 E-value=23 Score=39.15 Aligned_cols=39 Identities=23% Similarity=0.300 Sum_probs=34.4
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+|.++|.. .+|.++|..|++.|.+|+. +++++.++|++.
T Consensus 2 kI~vIGlG---~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g 42 (411)
T TIGR03026 2 KIAVIGLG---YVGLPLAALLADLGHEVTGVDIDQEKVDKLNKG 42 (411)
T ss_pred EEEEECCC---chhHHHHHHHHhcCCeEEEEECCHHHHHHhhcC
Confidence 58899975 9999999999999999999 888888888764
No 482
>KOG1600 consensus Fatty acid desaturase [Lipid transport and metabolism]
Probab=64.00 E-value=6.3 Score=42.58 Aligned_cols=22 Identities=23% Similarity=0.465 Sum_probs=16.3
Q ss_pred hhhhhcchhhHHHHHHHHHHHH
Q 006623 89 VDRERNWDDQIVFNGLIFYIVR 110 (638)
Q Consensus 89 vdrE~~~~n~iIl~~li~~~~~ 110 (638)
..||+.|.|.++++.+-....+
T Consensus 34 ~~~~~~w~nv~~~~~l~~~a~y 55 (321)
T KOG1600|consen 34 WKRELVWRNVVLFSALHIVALY 55 (321)
T ss_pred hhcchhhhhhHHHHHHHHHHHH
Confidence 6899999998887776554433
No 483
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=63.93 E-value=11 Score=43.39 Aligned_cols=39 Identities=18% Similarity=0.144 Sum_probs=34.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l 503 (638)
.-++|.++|+ | .+|+.||..|++.|.+|++ ++++.+++.
T Consensus 6 ~i~~V~VIGa-G--~MG~gIA~~la~aG~~V~l~D~~~e~l~~~ 46 (507)
T PRK08268 6 SIATVAVIGA-G--AMGAGIAQVAAQAGHTVLLYDARAGAAAAA 46 (507)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 4578999999 4 9999999999999999999 788877764
No 484
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=63.46 E-value=16 Score=37.58 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=35.1
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~ 504 (638)
....|++.|++| .||.++++.+..+|.++.. ++.++.+.++
T Consensus 138 ~~~~vlI~g~~~--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 180 (323)
T cd05282 138 PGDWVIQNAANS--AVGRMLIQLAKLLGFKTINVVRRDEQVEELK 180 (323)
T ss_pred CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecChHHHHHHH
Confidence 456899999998 9999999999999999877 7777877774
No 485
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=63.43 E-value=23 Score=38.20 Aligned_cols=52 Identities=17% Similarity=0.190 Sum_probs=44.9
Q ss_pred ceeeecCChhHHHHHHhcCcCCCc--EEEEe-cccCchhhHHHHHHHHhccCcEEEe
Q 006623 441 KIKVVDGSSLAAAVVVNSLPKTTA--HVLLR-GTVTANKVANAVASSLCQMGIKVAT 494 (638)
Q Consensus 441 ~irvv~Gnsltaavv~~~ip~~~~--~V~~~-Gatg~~kig~ava~~L~~~~~~v~~ 494 (638)
++=.|+|+|-||-.++..-.+..+ +|+|+ +-.+ .=|+..|+.|.+-|+.+++
T Consensus 121 ~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~--~eG~~~ak~L~~~gI~~~~ 175 (301)
T COG1184 121 DVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPR--GEGRIMAKELRQSGIPVTV 175 (301)
T ss_pred CEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCc--chHHHHHHHHHHcCCceEE
Confidence 466899999999999999987766 88888 5554 7799999999999999999
No 486
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=63.37 E-value=17 Score=39.44 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=55.1
Q ss_pred eeeecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc
Q 006623 442 IKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE 510 (638)
Q Consensus 442 irvv~Gnsltaavv~~~i--p~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~ 510 (638)
.-+.-+.++||++.+.+| |++-++|+|-||.| .+|+.+-+.---.|-+|.= -++|+..-|+++...+
T Consensus 131 lg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsG--AvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d 201 (343)
T KOG1196|consen 131 LGLLGMPGLTAYAGFYEICSPKKGETVFVSAASG--AVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFD 201 (343)
T ss_pred hhccCCchhHHHHHHHHhcCCCCCCEEEEeeccc--hhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCc
Confidence 455677899999999998 67779999999999 9999887765567777766 7888888888886654
No 487
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=63.32 E-value=9.9 Score=39.72 Aligned_cols=41 Identities=12% Similarity=0.246 Sum_probs=31.3
Q ss_pred EEEEecccCchhhHHHHHHHHhccC----cEEEe--cch-hhHHHHHhhCC
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMG----IKVAT--ICK-DDYEKLKLRIP 508 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~----~~v~~--~~~-~~~~~l~~~~~ 508 (638)
+|.++| +| .+|+++|+.|.+.| .++.+ |+. ++.+.++.+.+
T Consensus 5 kI~~IG-~G--~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g 52 (279)
T PRK07679 5 NISFLG-AG--SIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYG 52 (279)
T ss_pred EEEEEC-cc--HHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcC
Confidence 689999 55 99999999999887 56666 554 46788776644
No 488
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=62.96 E-value=32 Score=34.69 Aligned_cols=41 Identities=15% Similarity=0.119 Sum_probs=34.4
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~ 505 (638)
...|++.|++| -+|.+.++.+...|.+|.. ++.++.+.+++
T Consensus 137 g~~vlI~g~~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 179 (320)
T cd05286 137 GDTVLVHAAAG--GVGLLLTQWAKALGATVIGTVSSEEKAELARA 179 (320)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 46899999998 9999999988899999887 67777777743
No 489
>PRK08605 D-lactate dehydrogenase; Validated
Probab=62.60 E-value=21 Score=38.61 Aligned_cols=85 Identities=15% Similarity=0.117 Sum_probs=49.2
Q ss_pred CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHHHHHhhCCcchhchhhhccccccceEEEee-------cCc
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLV-------GDD 533 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~v-------g~~ 533 (638)
..++|.++|.- .||+++|+.|+ ..|.+|...++..-...+..+. ...+|.++. +.++++-+. ...
T Consensus 145 ~g~~VgIIG~G---~IG~~vA~~L~~~~g~~V~~~d~~~~~~~~~~~~--~~~~l~ell--~~aDvIvl~lP~t~~t~~l 217 (332)
T PRK08605 145 KDLKVAVIGTG---RIGLAVAKIFAKGYGSDVVAYDPFPNAKAATYVD--YKDTIEEAV--EGADIVTLHMPATKYNHYL 217 (332)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhcCCCEEEEECCCccHhHHhhcc--ccCCHHHHH--HhCCEEEEeCCCCcchhhh
Confidence 45679999975 99999999996 4688888833221111111111 111222221 222333111 112
Q ss_pred CChhhhhcCCCCceeecccc
Q 006623 534 LTGKEQARAPKGTIFIPYTQ 553 (638)
Q Consensus 534 ~~~~~q~~a~~G~~f~~~~~ 553 (638)
++.+...++++|++++..++
T Consensus 218 i~~~~l~~mk~gailIN~sR 237 (332)
T PRK08605 218 FNADLFKHFKKGAVFVNCAR 237 (332)
T ss_pred cCHHHHhcCCCCcEEEECCC
Confidence 34566778999999999999
No 490
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=62.56 E-value=19 Score=41.54 Aligned_cols=85 Identities=20% Similarity=0.144 Sum_probs=52.9
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchh-hHHHHHhhCCcchhchhhhccccccceEEEe-------ecCc
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD-DYEKLKLRIPVEAQHNLVLSTSYAAHKTIWL-------VGDD 533 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~-~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~-------vg~~ 533 (638)
..++|.++|-- .||+.+|+.|...|.+|...+.. .-+.. .+.+.+.. +|.+.. +.+|++.+ .-..
T Consensus 139 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~~~g~~~~-~l~ell--~~aDiV~l~lP~t~~t~~l 211 (526)
T PRK13581 139 YGKTLGIIGLG---RIGSEVAKRAKAFGMKVIAYDPYISPERA-AQLGVELV-SLDELL--ARADFITLHTPLTPETRGL 211 (526)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHH-HhcCCEEE-cHHHHH--hhCCEEEEccCCChHhhcC
Confidence 45689999985 99999999999999999882211 11111 11121111 223222 22233311 1234
Q ss_pred CChhhhhcCCCCceeecccc
Q 006623 534 LTGKEQARAPKGTIFIPYTQ 553 (638)
Q Consensus 534 ~~~~~q~~a~~G~~f~~~~~ 553 (638)
++.+....+++|++++.++|
T Consensus 212 i~~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 212 IGAEELAKMKPGVRIINCAR 231 (526)
T ss_pred cCHHHHhcCCCCeEEEECCC
Confidence 56788999999999999999
No 491
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=62.56 E-value=12 Score=39.95 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=34.1
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+|.+.|+- .+|.++|..|.+.|.+|.+ |+++..+.++++
T Consensus 2 kI~IiGaG---a~G~ala~~L~~~g~~V~l~~r~~~~~~~i~~~ 42 (326)
T PRK14620 2 KISILGAG---SFGTAIAIALSSKKISVNLWGRNHTTFESINTK 42 (326)
T ss_pred EEEEECcC---HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHc
Confidence 48899996 9999999999999999988 888888888763
No 492
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=62.46 E-value=9.3 Score=43.83 Aligned_cols=111 Identities=12% Similarity=0.025 Sum_probs=69.0
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-C--Ccc---hhchhhhcc-ccc-cceEEEee-
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-I--PVE---AQHNLVLST-SYA-AHKTIWLV- 530 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~-~--~~~---~~~~l~~~~-~~~-~~~i~w~v- 530 (638)
...+|-++|-- ..|+++|+-|.++|.+|.+ |+.++-+.+.++ . +.. ...++.++. +.+ ++.|+-.|
T Consensus 5 ~~~~IG~IGLG---~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~ 81 (493)
T PLN02350 5 ALSRIGLAGLA---VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVK 81 (493)
T ss_pred CCCCEEEEeeH---HHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECC
Confidence 34578888866 8999999999999999999 888888888763 1 111 112222222 111 22332122
Q ss_pred -----cCcCChhhhhcCCCCceeecccccCCc-------CCC-CCceeecCCccccCCC
Q 006623 531 -----GDDLTGKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPPS 576 (638)
Q Consensus 531 -----g~~~~~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~~ 576 (638)
.+.+ ..-...+.+|.++||.+-++|+ +++ +.+.|.+-|+.--|..
T Consensus 82 ~~~aV~~Vi-~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fldapVSGG~~g 139 (493)
T PLN02350 82 AGAPVDQTI-KALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYLGMGVSGGEEG 139 (493)
T ss_pred CcHHHHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeCCCcCCHHH
Confidence 2222 1112345799999999998776 222 5667888888755543
No 493
>KOG2380 consensus Prephenate dehydrogenase (NADP+) [Amino acid transport and metabolism]
Probab=62.37 E-value=6.3 Score=43.30 Aligned_cols=146 Identities=21% Similarity=0.235 Sum_probs=87.4
Q ss_pred cCCceeeecCCCCcceeeecCChhHHHHHH-hcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHH
Q 006623 427 RNGEIYLERQPNKLKIKVVDGSSLAAAVVV-NSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKL 503 (638)
Q Consensus 427 ~~g~~~~~k~p~~L~irvv~Gnsltaavv~-~~ip~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l 503 (638)
.+-.-+..--|.-|++|-.|--+.+-+.+. +++.+ .+.+|.++|=. +.|+-.|..|.+.|-.+..-++++|+++
T Consensus 13 ~~~~t~~~~~p~~~~~~a~~~~~i~d~~~~~~s~~~~k~tl~IaIIGfG---nmGqflAetli~aGh~li~hsRsdyssa 89 (480)
T KOG2380|consen 13 RNSPTFLISPPRSLRIRAIDAAQIFDYMVSEDSIEQWKATLVIAIIGFG---NMGQFLAETLIDAGHGLICHSRSDYSSA 89 (480)
T ss_pred cCCCceeccCcHHHHHHhhhhhhhhhcccCcchhhhcccceEEEEEecC---cHHHHHHHHHHhcCceeEecCcchhHHH
Confidence 333334444444456666664444443332 22322 46688888865 8999999999999999999666779999
Q ss_pred HhhCCcchhchhhhccccccceEEEeecCcCChhhh------hcCCCCceeecccc--cCCc-----CCCCCceeecCCc
Q 006623 504 KLRIPVEAQHNLVLSTSYAAHKTIWLVGDDLTGKEQ------ARAPKGTIFIPYTQ--IPPR-----KLRKDCFYHSTPA 570 (638)
Q Consensus 504 ~~~~~~~~~~~l~~~~~~~~~~i~w~vg~~~~~~~q------~~a~~G~~f~~~~~--~~~~-----~~R~dc~y~~~~a 570 (638)
+++.+...-.+|-+.- -|..|+|=.--+.++-|.. .+...||+|.++.. -|++ -+-+||-.+.+-.
T Consensus 90 a~~yg~~~ft~lhdlc-erhpDvvLlctsilsiekilatypfqrlrrgtlfvdvlSvKefek~lfekYLPkdfDIlctHp 168 (480)
T KOG2380|consen 90 AEKYGSAKFTLLHDLC-ERHPDVVLLCTSILSIEKILATYPFQRLRRGTLFVDVLSVKEFEKELFEKYLPKDFDILCTHP 168 (480)
T ss_pred HHHhcccccccHHHHH-hcCCCEEEEEehhhhHHHHHHhcCchhhccceeEeeeeecchhHHHHHHHhCccccceEeecC
Confidence 9997765443332211 1112333011111111111 13477999998765 2333 2349999999999
Q ss_pred cccCCC
Q 006623 571 MIIPPS 576 (638)
Q Consensus 571 ~~~P~~ 576 (638)
|-=|++
T Consensus 169 mfGPks 174 (480)
T KOG2380|consen 169 MFGPKS 174 (480)
T ss_pred CcCCCc
Confidence 988873
No 494
>PLN02712 arogenate dehydrogenase
Probab=62.27 E-value=11 Score=44.73 Aligned_cols=106 Identities=15% Similarity=0.105 Sum_probs=58.3
Q ss_pred CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEEEeec-------Cc
Q 006623 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTIWLVG-------DD 533 (638)
Q Consensus 463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~w~vg-------~~ 533 (638)
+.+|.++| .| .+|.++|+.|.+.|.+|.. ++.++ + ..++.+.....++.+.. .+.+++| ++- +.
T Consensus 52 ~~kIgIIG-~G--~mG~slA~~L~~~G~~V~~~dr~~~~-~-~A~~~Gv~~~~d~~e~~-~~~aDvV-iLavP~~~~~~v 124 (667)
T PLN02712 52 QLKIAIIG-FG--NYGQFLAKTLISQGHTVLAHSRSDHS-L-AARSLGVSFFLDPHDLC-ERHPDVI-LLCTSIISTENV 124 (667)
T ss_pred CCEEEEEc-cC--HHHHHHHHHHHHCCCEEEEEeCCHHH-H-HHHHcCCEEeCCHHHHh-hcCCCEE-EEcCCHHHHHHH
Confidence 56899999 57 9999999999999999887 44332 2 22233322211212111 0123444 221 11
Q ss_pred CChhhhhcCCCCceeecccccCCc------C-CCCCceeecCCccccCC
Q 006623 534 LTGKEQARAPKGTIFIPYTQIPPR------K-LRKDCFYHSTPAMIIPP 575 (638)
Q Consensus 534 ~~~~~q~~a~~G~~f~~~~~~~~~------~-~R~dc~y~~~~a~~~P~ 575 (638)
++.--...+++|++++|++.+... + +.+++.|..+=.|-=|+
T Consensus 125 l~~l~~~~l~~g~iVvDv~SvK~~~~~~l~~~l~~~~~~v~~HPMaG~e 173 (667)
T PLN02712 125 LKSLPLQRLKRNTLFVDVLSVKEFAKNLLLDYLPEDFDIICSHPMFGPQ 173 (667)
T ss_pred HHhhhhhcCCCCeEEEECCCCcHHHHHHHHHhcCCCCeEEeeCCcCCCc
Confidence 111111235789999999865531 1 22466666666665444
No 495
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=62.16 E-value=16 Score=37.19 Aligned_cols=39 Identities=18% Similarity=0.189 Sum_probs=26.6
Q ss_pred EecccCchhhHHHHHHHHhccCc--EEEe--cchh---hHHHHHhhCC
Q 006623 468 LRGTVTANKVANAVASSLCQMGI--KVAT--ICKD---DYEKLKLRIP 508 (638)
Q Consensus 468 ~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~---~~~~l~~~~~ 508 (638)
|+|||| -+|+.+...|.+++- +|.+ |+++ ..+++++.+.
T Consensus 1 lTGaTG--flG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~ 46 (249)
T PF07993_consen 1 LTGATG--FLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALK 46 (249)
T ss_dssp EE-TTS--HHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-
T ss_pred CcCCCc--HHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcc
Confidence 799999 999999999996654 7766 6653 4566655544
No 496
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=62.02 E-value=17 Score=38.15 Aligned_cols=96 Identities=16% Similarity=0.232 Sum_probs=58.0
Q ss_pred hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchhchhhhccccccceEE-EeecC--cCCh-----hh-hhcCCC
Q 006623 476 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTI-WLVGD--DLTG-----KE-QARAPK 544 (638)
Q Consensus 476 kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~i~-w~vg~--~~~~-----~~-q~~a~~ 544 (638)
.+|.++|+.|++.|.+|.+ |++++.+++++.- .....++.++. +.+++| -.|-+ .+.. ++ ...+++
T Consensus 6 ~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g-~~~~~s~~~~~--~~advVil~vp~~~~~~~v~~g~~~l~~~~~~ 82 (288)
T TIGR01692 6 NMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAG-AQAAASPAEAA--EGADRVITMLPAGQHVISVYSGDEGILPKVAK 82 (288)
T ss_pred HhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcC-CeecCCHHHHH--hcCCEEEEeCCChHHHHHHHcCcchHhhcCCC
Confidence 8999999999999999998 8888888887641 11111111111 222333 12221 1110 11 224689
Q ss_pred CceeecccccCCc---CC----C-CCceeecCCccccC
Q 006623 545 GTIFIPYTQIPPR---KL----R-KDCFYHSTPAMIIP 574 (638)
Q Consensus 545 G~~f~~~~~~~~~---~~----R-~dc~y~~~~a~~~P 574 (638)
|+++++.|-++|. ++ + +.+.|.+.|.+--|
T Consensus 83 g~~vid~st~~p~~~~~~~~~~~~~g~~~vdaPv~Gg~ 120 (288)
T TIGR01692 83 GSLLIDCSTIDPDSARKLAELAAAHGAVFMDAPVSGGV 120 (288)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHcCCcEEECCCCCCH
Confidence 9999999998886 11 1 45668887776433
No 497
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=61.77 E-value=13 Score=39.16 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=34.5
Q ss_pred EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006623 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (638)
Q Consensus 465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~ 506 (638)
+|.++|+ | .+|+++|..|++.|.+|.+ |++++.++++++
T Consensus 3 kI~iiG~-G--~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 43 (325)
T PRK00094 3 KIAVLGA-G--SWGTALAIVLARNGHDVTLWARDPEQAAEINAD 43 (325)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc
Confidence 5889997 4 9999999999999999988 888888888775
No 498
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=61.60 E-value=21 Score=36.76 Aligned_cols=89 Identities=11% Similarity=0.059 Sum_probs=53.7
Q ss_pred CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcchh-----chhh----hccccccceEE-Ee
Q 006623 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-----HNLV----LSTSYAAHKTI-WL 529 (638)
Q Consensus 462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~-----~~l~----~~~~~~~~~i~-w~ 529 (638)
....|++.|++| .+|.++++.+..+|.+|.. +++++.+.+++ ++.... .+.. +.+.-+..+++ -.
T Consensus 142 ~~~~vlI~g~~~--~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~ 218 (324)
T cd08244 142 PGDVVLVTAAAG--GLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-LGADVAVDYTRPDWPDQVREALGGGGVTVVLDG 218 (324)
T ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCEEEecCCccHHHHHHHHcCCCCceEEEEC
Confidence 356799999998 9999999999999999877 77778777743 332111 1111 11110112333 23
Q ss_pred ecCcCChhhhhcCCCCceeecccc
Q 006623 530 VGDDLTGKEQARAPKGTIFIPYTQ 553 (638)
Q Consensus 530 vg~~~~~~~q~~a~~G~~f~~~~~ 553 (638)
+|.....+-.+..+++..|+.++.
T Consensus 219 ~g~~~~~~~~~~l~~~g~~v~~g~ 242 (324)
T cd08244 219 VGGAIGRAALALLAPGGRFLTYGW 242 (324)
T ss_pred CChHhHHHHHHHhccCcEEEEEec
Confidence 343333444556677777887763
No 499
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=61.59 E-value=78 Score=34.06 Aligned_cols=95 Identities=16% Similarity=0.316 Sum_probs=66.7
Q ss_pred HHHcCCcEEEecc-----ccccccc-------ccCCceeeecCCC---------CcceeeecCCh-h---------HHHH
Q 006623 406 ADAKGVKVISLGL-----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS-L---------AAAV 454 (638)
Q Consensus 406 A~k~G~kv~~LG~-----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns-l---------taav 454 (638)
+.++|..++.|+. +.++|.+ .+..-..+.|+++ ...|+|+.+-+ - =+.+
T Consensus 61 ~~~LGg~~i~l~~~~~s~~~kgEsi~Dta~vls~y~D~iviR~~~~~~~~~~a~~s~vPVINa~~g~~~HPtQ~LaDl~T 140 (301)
T TIGR00670 61 MKRLGGDVVNFSDSETSSVAKGETLADTIKTLSGYSDAIVIRHPLEGAARLAAEVSEVPVINAGDGSNQHPTQTLLDLYT 140 (301)
T ss_pred HHHcCCcEEEcCCCCcccCCCCcCHHHHHHHHHHhCCEEEEECCchhHHHHHHhhCCCCEEeCCCCCCCCcHHHHHHHHH
Confidence 5679999999987 6666654 5556677888876 34578887632 1 2455
Q ss_pred HHhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH
Q 006623 455 VVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY 500 (638)
Q Consensus 455 v~~~ip~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~ 500 (638)
+.+.... +..+|+++|...-+.+++..+..+++-|.+|.+-..+.|
T Consensus 141 i~e~~g~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~ 187 (301)
T TIGR00670 141 IYEEFGRLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEEL 187 (301)
T ss_pred HHHHhCCCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccc
Confidence 5555432 457999999871128999999999999999999444444
No 500
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=61.50 E-value=11 Score=40.16 Aligned_cols=41 Identities=27% Similarity=0.386 Sum_probs=32.1
Q ss_pred cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhC
Q 006623 464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRI 507 (638)
Q Consensus 464 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~ 507 (638)
++|.++|+ | .+|+++|..|+++|. ++.+ +++++.+.+..++
T Consensus 1 ~kI~IIGa-G--~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL 45 (306)
T cd05291 1 RKVVIIGA-G--HVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDL 45 (306)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhH
Confidence 37899997 6 899999999999895 5676 7777766655544
Done!