BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006624
(638 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/632 (69%), Positives = 532/632 (84%), Gaps = 4/632 (0%)
Query: 6 SIASKRCISTLSCLCQRIKQTENEIVHMFQLSGPIDEMRNFPVSK-KFARKDTSARKLDE 64
S ++KR IS+L L QR KQTENEIV MF + P E P K K +RKD S R LDE
Sbjct: 8 SGSAKRSISSLPHLSQRFKQTENEIVQMFSV--PNHEESEKPQEKWKLSRKDPSVRMLDE 65
Query: 65 RFIRILKIFKWGPDAEKALEVLKMRVDHRLVHQVLNIDVEINVKIQFFKWAGRRRNFEHN 124
RFIRI+KIFKWGPDAEKALEVLK++VDHRLV +L IDVEINVKIQFFKWAG+RRNF+H+
Sbjct: 66 RFIRIVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHD 125
Query: 125 STTYMALIRCLDETRMIGVMWKSIQDMVRSTCV-MGPSVLSEIVNILGKAKMVNKALSIF 183
+TYM LIRCL+E R+ G M+++IQ++VR+T V + P+VLSE+V LG+AKMV+KALS+F
Sbjct: 126 CSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVF 185
Query: 184 YQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGK 243
YQ K RKCKPT++TYNS+ILMLMQEG +EK+HE+Y EMCNEG+CFPDT+TYSALIS++ K
Sbjct: 186 YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEK 245
Query: 244 LGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYT 303
LGR+ SAIRLFDEMK+N +QPT KIYTTL+ IYFK+G+VEKAL L +EMK GC+ TVYT
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYT 305
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKME 363
YTELIKGLG+AGRV++AYG + +ML++G PD+V +NNL+N+LG+ GR+E+ +F++M
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 364 ALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRV 423
+C P VV+YNTVIK+LFESKA SE S+WF+KMKA+ V PS FTYSILIDG+CKTNRV
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 424 EKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVM 483
EKA LLLEEM+EKGFPPCPAAYCSLIN GKAKRYEAANELF ELKE G S+RVYAVM
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485
Query: 484 IKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGC 543
IKHFGKCG+LS+AVDLFNEMK PDVY YNALMSGMV+AGMI++A SLLR+MEE+GC
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Query: 544 VPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAAR 603
DINSHNIILNG A++G P+RA+E+F ++HS IKPD V+YNT+LGC + AGMFEEAAR
Sbjct: 546 RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAAR 605
Query: 604 LMKDMNAKGFEYDQITYSSILEAVGKVDEDRN 635
+M++M KGFEYD ITYSSIL+AVG VD +++
Sbjct: 606 MMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 187/416 (44%), Gaps = 44/416 (10%)
Query: 124 NSTTYMALIRCLDETRMIGVMWKSIQ--DMVRSTCVMGPS--VLSEIVNILGKAKMVNKA 179
++ TY ALI ++ +G +I+ D ++ C M P+ + + ++ I K V KA
Sbjct: 232 DTITYSALISSYEK---LGRNDSAIRLFDEMKDNC-MQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 180 LSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG-------------- 225
L +F ++K C PT TY +I L + G ++ + Y +M +G
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 226 --------------------NCFPDTVTYSALISAFGKLGRDISAIR-LFDEMKENGLQP 264
C P V+Y+ +I A + +S + FD+MK + + P
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 265 TAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLF 324
+ Y+ L+ Y K VEKAL L++EM KG Y LI LG+A R E A LF
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 325 MNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFES 384
+ + + +I G+ G+L +A+ LFN+M+ P+V YN ++ + ++
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Query: 385 KAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAA 444
+EA++ KM+ NG +++I+++GF +T +A + E ++ G P
Sbjct: 528 -GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 445 YCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLF 500
Y +L+ + A +E A + E+K+ A Y+ ++ G D V F
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 119 RNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNK 178
+ F Y +LI L + + + +++ + + V + ++ GK +++
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE 497
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
A+ +F ++K++ P YN+++ +++ G + + L +M E C D +++ ++
Sbjct: 498 AVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM-EENGCRADINSHNIIL 556
Query: 239 SAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCA 298
+ F + G AI +F+ +K +G++P Y TL+ + G E+A +++EMK KG
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Query: 299 LTVYTYTELIKGLGRAGRVEDAYGLF 324
TY+ ++ +G +D F
Sbjct: 617 YDAITYSSILDAVGNVDHEKDDVSSF 642
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 290/600 (48%), Gaps = 42/600 (7%)
Query: 69 ILKIFKWGPDAEKALEVLKMRVDHRLVHQVLNIDVEINVKIQFFKWAGRRRNFEHNSTTY 128
+L+ WGP AE L L + V VL ++N I++F+W RR H +Y
Sbjct: 42 VLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESY 101
Query: 129 MALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSV-------------------------- 162
+L+ + R + + + +M S GPSV
Sbjct: 102 NSLLLVMARCRNFDALDQILGEM--SVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 163 --------LSEIVNILGKAKMVNKA---LSIFYQIKSRKCKPTANTYNSMILMLMQEGYY 211
S ++G VN + L++F Q++ +PT + + ++I +EG
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 212 EKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTT 271
+ L +EM + D V Y+ I +FGK+G+ A + F E++ NGL+P YT+
Sbjct: 220 DSALSLLDEM-KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 272 LVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEG 331
++ + K +++A+ + + ++ Y Y +I G G AG+ ++AY L +G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 332 CKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEA 391
P ++ N ++ L + G++++ALK+F +M+ PN+ TYN +I L + A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRA-GKLDTA 396
Query: 392 SAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLING 451
+ M+ G+ P+ T +I++D CK+ ++++A + EEM+ K P +CSLI+G
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 452 YGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPD 511
GK R + A +++ ++ + +++ VY +IK+F GR D ++ +M C PD
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 512 VYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFT 571
+ N M M +AG + ++ ++ VPD S++I+++GL K+G E+F
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 572 KMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVD 631
M+ D +YN ++ + G +A +L+++M KGFE +TY S+++ + K+D
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636
Score = 238 bits (608), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 247/470 (52%), Gaps = 5/470 (1%)
Query: 160 PSVLSE--IVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHEL 217
PSV++ I+ L K V++AL +F ++K + P +TYN +I ML + G + EL
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 218 YNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYF 277
+ M G FP+ T + ++ K + A +F+EM P + +L+
Sbjct: 400 RDSMQKAG-LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 278 KLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIV 337
K+G V+ A + ++M C YT LIK GR ED + ++ +M+ + C PD+
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518
Query: 338 LINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEK 397
L+N ++ + +AG E +F +++A + P+ +Y+ +I L ++ A+E F
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA-GFANETYELFYS 577
Query: 398 MKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKR 457
MK G + Y+I+IDGFCK +V KA+ LLEEM+ KGF P Y S+I+G K R
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 458 YEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNA 517
+ A LF E K + +Y+ +I FGK GR+ +A + E+ + P++YT+N+
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 518 LMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSE 577
L+ +V+A I++A + M+E C P+ ++ I++NGL K +A + +MQ
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 578 IKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
+KP +SY T++ L++AG EA L A G D Y++++E +
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/533 (24%), Positives = 251/533 (47%), Gaps = 39/533 (7%)
Query: 134 CLDETRMIG---VMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIKSRK 190
C+D +G + WK ++ + + ++ +L KA +++A+ +F ++ +
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 191 CKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISA 250
P YN+MI+ G +++ + L +G+ P + Y+ +++ K+G+ A
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS-IPSVIAYNCILTCLRKMGKVDEA 362
Query: 251 IRLFDEMKEN----------------------------------GLQPTAKIYTTLVSIY 276
+++F+EMK++ GL P + +V
Sbjct: 363 LKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 277 FKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDI 336
K ++++A + +EM K C T+ LI GLG+ GRV+DAY ++ ML C+ +
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 337 VLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFE 396
++ +LI GR ED K++ M C P++ NT + +F++ P + A FE
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP-EKGRAMFE 541
Query: 397 KMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAK 456
++KA +P +YSILI G K + + L M+E+G AY +I+G+ K
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 457 RYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYN 516
+ A +L E+K + Y +I K RL +A LF E K R + +V Y+
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 517 ALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHS 576
+L+ G + G ID+AY +L + + G P++ + N +L+ L K+ A+ F M+
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Query: 577 EIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
+ P+ V+Y ++ L + F +A ++M +G + I+Y++++ + K
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAK 774
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 244/488 (50%), Gaps = 8/488 (1%)
Query: 118 RRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVN 177
+++ N +TY LI L + ++ M ++ ++ +V+ L K++ ++
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 178 KALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSAL 237
+A ++F ++ + C P T+ S+I L + G + +++Y +M + +C +++ Y++L
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML-DSDCRTNSIVYTSL 488
Query: 238 ISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGC 297
I F GR +++ +M P ++ T + FK GE EK + +E+K +
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 298 ALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALK 357
+Y+ LI GL +AG + Y LF +M ++GC D N +I+ + G++ A +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 358 LFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGF 417
L +M+ +P VVTY +VI L + EA FE+ K+ + + YS LIDGF
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDR-LDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 418 CKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSA 477
K R+++A+L+LEE+ +KG P + SL++ KA+ A F +KE +
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 478 RVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRR 537
Y ++I K + + A + EM+K KP +Y ++SG+ +AG I +A +L R
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 538 MEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT---ILGCLSR 594
+ +G VPD +N ++ GL+ RAM+ F+ + + + + T +L L +
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNG---NRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
Query: 595 AGMFEEAA 602
E+AA
Sbjct: 845 NDCLEQAA 852
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 153/321 (47%), Gaps = 2/321 (0%)
Query: 117 RRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMV 176
+ R F ++ +Y LI L + ++ M CV+ + +++ K V
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
NKA + ++K++ +PT TY S+I L + ++ + L+ E + V YS+
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE-AKSKRIELNVVIYSS 662
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
LI FGK+GR A + +E+ + GL P + +L+ K E+ +AL Q MK
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
C TY LI GL + + A+ + M K+G KP + +I+ L +AG + +A
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
LF++ +A P+ YN +I+ L + A +A + FE+ + G+ T +L+D
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGL-SNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDT 841
Query: 417 FCKTNRVEKAHLLLEEMEEKG 437
K + +E+A ++ + E G
Sbjct: 842 LHKNDCLEQAAIVGAVLRETG 862
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 258/514 (50%), Gaps = 8/514 (1%)
Query: 123 HNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSV--LSEIVNILGKAKMVNKAL 180
HN TY +I CL + + M++ GPS+ L+ ++N +++A+
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLG--YGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 181 SIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISA 240
++ Q+ +P T+ +++ L Q + L M +G C PD VTY A+I+
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVING 214
Query: 241 FGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALT 300
K G A+ L ++M++ ++ IY+T++ K V+ AL L EM KG
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 301 VYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFN 360
V+TY+ LI L GR DA L +ML+ P++V N+LI+ + G+L +A KLF+
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 361 KMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKT 420
+M PN+VTYN++I F EA F M + LP TY+ LI+GFCK
Sbjct: 335 EMIQRSIDPNIVTYNSLING-FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 421 NRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVY 480
+V L +M +G Y +LI+G+ +A + A +F ++ + Y
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 481 AVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEE 540
++ K G+L A+ +F ++K + +PD+YTYN + GM +AG ++D + L +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 541 DGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEE 600
G PD+ ++N +++G K G + A +F KM+ PD+ +YNT++ R G
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 601 AARLMKDMNAKGFEYDQITYSSILEAV--GKVDE 632
+A L+K+M + F D TY + + + G++D+
Sbjct: 574 SAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDK 607
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 210/454 (46%), Gaps = 15/454 (3%)
Query: 189 RKCKPTANTYNSMILMLMQEGYYEKIH-------------ELYNEMCNEGNCFPDTVTYS 235
RK P+ L +GY EK+ +L+ EM + FP V +S
Sbjct: 11 RKASPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMV-KSRPFPSIVEFS 69
Query: 236 ALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGK 295
L+SA K+ + I ++M+ G+ Y +++ + ++ AL ++ +M
Sbjct: 70 KLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKL 129
Query: 296 GCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDA 355
G ++ T L+ G R+ +A L M++ G +PD V L++ L + + +A
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 356 LKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILID 415
+ L +M C+P++VTY VI L + P A KM+ + YS +ID
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEP-DLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 416 GFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCS 475
CK V+ A L EM+ KG P Y SLI+ R+ A+ L ++ E
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 476 SARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLL 535
+ + +I F K G+L +A LF+EM + P++ TYN+L++G +D+A +
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 536 RRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRA 595
M C+PD+ ++N ++NG K+ ME+F M + + V+Y T++ +A
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 596 GMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
+ A + K M + G + +TY+++L+ + K
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 211/451 (46%), Gaps = 2/451 (0%)
Query: 121 FEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKAL 180
++ ++ T+ L+ L + ++ MV C ++N L K + AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 181 SIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISA 240
++ +++ K + Y+++I L + + + L+ EM N+G PD TYS+LIS
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG-IRPDVFTYSSLISC 284
Query: 241 FGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALT 300
GR A RL +M E + P + +L+ + K G++ +A L EM +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 301 VYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFN 360
+ TY LI G R+++A +F M+ + C PD+V N LIN +A ++ D ++LF
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 361 KMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKT 420
M N VTY T+I F++ + A F++M ++GV P+ TY+ L+DG CK
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQA-SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 421 NRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVY 480
++EKA ++ E +++ P Y + G KA + E +LF L Y
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 481 AVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEE 540
MI F K G +A LF +MK+ PD TYN L+ +R G + L++ M
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Query: 541 DGCVPDINSHNIILNGLAKSGGPKRAMEIFT 571
D +++ ++ + L K +E+ +
Sbjct: 584 CRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 84/176 (47%)
Query: 457 RYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYN 516
+ + A +LF E+ + S ++ ++ K + + +M+ L ++YTYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 517 ALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHS 576
+++ + R + A ++L +M + G P I + N +LNG A+ + +M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 577 EIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDE 632
+PD V++ T++ L + EA L++ M KG + D +TY +++ + K E
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 246/497 (49%), Gaps = 2/497 (0%)
Query: 123 HNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSI 182
HN TY LI C + + + M++ LS ++N +K +++A+++
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 183 FYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFG 242
Q+ +P T+N++I L + L + M +G C PD VTY +++
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLC 232
Query: 243 KLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVY 302
K G A L ++M++ L+P IY T++ K ++ AL L +EM+ KG V
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 303 TYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKM 362
TY+ LI L GR DA L +M++ PD+ + LI+ + G+L +A KL+++M
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 363 EALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNR 422
P++VTY+++I F EA FE M + P TY+ LI GFCK R
Sbjct: 353 VKRSIDPSIVTYSSLING-FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 423 VEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAV 482
VE+ + EM ++G Y LI G +A + A E+F E+ + Y
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 483 MIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDG 542
++ K G+L A+ +F +++ + +P +YTYN ++ GM +AG ++D + L + G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 543 CVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAA 602
PD+ ++N +++G + G + A +F +M+ P++ YNT++ R G E +A
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 603 RLMKDMNAKGFEYDQIT 619
L+K+M + GF D T
Sbjct: 592 ELIKEMRSCGFAGDAST 608
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 219/445 (49%), Gaps = 39/445 (8%)
Query: 229 PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGL 288
P+ VT S+L++ + R A+ L D+M G QP + TL+ F + +A+ L
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 208
Query: 289 VQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGR 348
+ M KGC + TY ++ GL + G + A+ L M + +P +++ N +I+ L +
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 268
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPF 408
++DAL LF +ME +PNVVTY+++I L + S+AS M + P F
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYGRWSDASRLLSDMIERKINPDVF 327
Query: 409 TYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELF-LE 467
T+S LID F K ++ +A L +EM ++ P Y SLING+ R + A ++F
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 468 LKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
+ ++C Y +IK F K R+ + +++F EM + + TYN L+ G+ +AG
Sbjct: 388 VSKHC-FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSE---------- 577
D A + + M DG P+I ++N +L+GL K+G ++AM +F +Q S+
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 578 -------------------------IKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKG 612
+KPD V+YNT++ R G EEA L K+M G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 613 FEYDQITYSSILEAVGKVDEDRNPT 637
+ Y++++ A + D DR +
Sbjct: 567 TLPNSGCYNTLIRARLR-DGDREAS 590
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 231/461 (50%), Gaps = 7/461 (1%)
Query: 176 VNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFP-DTVTY 234
++ A+++F ++ + P+ ++ ++ + + ++ + L +M N G P + TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG--IPHNHYTY 119
Query: 235 SALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKG 294
S LI+ F + + A+ + +M + G +P ++L++ Y + +A+ LV +M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 295 KGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLED 354
G T+ LI GL + +A L M+ +GC+PD+V ++N L + G +
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 355 ALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILI 414
A L NKME + +P V+ YNT+I L + K +A F++M+ G+ P+ TYS LI
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH-MDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 415 DGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGC 474
C R A LL +M E+ P + +LI+ + K + A +L+ E+ +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 475 SSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSL 534
S Y+ +I F RL +A +F M C PDV TYN L+ G + +++ +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 535 LRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSR 594
R M + G V + ++NI++ GL ++G A EIF +M + P+ ++YNT+L L +
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 595 AGMFEEAARLMKDMNAKGFEYDQITYSSILEAV---GKVDE 632
G E+A + + + E TY+ ++E + GKV++
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 52/318 (16%)
Query: 118 RRNFEHNSTTYMALIR--C----LDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILG 171
+R+ + + TY +LI C LDE + + + MV C + ++
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQM------FEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 172 KAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDT 231
K K V + + +F ++ R TYN +I L Q G + E++ EM ++G P+
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNI 466
Query: 232 VTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQE 291
+TY+ L+ K G+ A+ +F+ ++ + ++PT IYT
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT--IYT--------------------- 503
Query: 292 MKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGR 351
Y +I+G+ +AG+VED + LF N+ +G KPD+V N +I+ R G
Sbjct: 504 ------------YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 352 LEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASA-WFEKMKANGVLPSPFTY 410
E+A LF +M+ PN YNT+I++ + EASA ++M++ G T
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARL--RDGDREASAELIKEMRSCGFAGDASTI 609
Query: 411 SILIDGFCKTNRVEKAHL 428
L+ R++K+ L
Sbjct: 610 G-LVTNMLHDGRLDKSFL 626
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 247/497 (49%), Gaps = 2/497 (0%)
Query: 123 HNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSI 182
H+ TY I C + + + M++ LS ++N +K ++ A+++
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 183 FYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFG 242
Q+ KP T+ ++I L + L ++M G C PD VTY +++
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLC 234
Query: 243 KLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVY 302
K G A+ L +M++ ++ IY T++ K ++ AL L EM KG V+
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 303 TYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKM 362
TY+ LI L GR DA L +M++ P++V + LI+ + G+L +A KL+++M
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 363 EALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNR 422
P++ TY+++I F EA FE M + P+ TYS LI GFCK R
Sbjct: 355 IKRSIDPDIFTYSSLING-FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 423 VEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAV 482
VE+ L EM ++G Y +LI+G+ +A+ + A +F ++ + Y +
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 483 MIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDG 542
++ K G+L+ A+ +F +++ +PD+YTYN ++ GM +AG ++D + L + G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 543 CVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAA 602
P++ ++N +++G + G + A + KM+ P++ +YNT++ R G E +A
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 603 RLMKDMNAKGFEYDQIT 619
L+K+M + GF D T
Sbjct: 594 ELIKEMRSCGFAGDAST 610
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 202/416 (48%), Gaps = 2/416 (0%)
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
++A+++ Q+ R C+P TY +++ L + G + L +M +G D V Y+
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNT 263
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
+I K A+ LF EM G++P Y++L+S G A L+ +M +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
V T++ LI + G++ +A L+ M+K PDI ++LIN RL++A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
+F M + C PNVVTY+T+IK ++K E F +M G++ + TY+ LI G
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKR-VEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSS 476
F + + A ++ ++M G P Y L++G K + A +F L+
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 477 ARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
Y +MI+ K G++ D +LF + P+V YN ++SG R G ++A SLL+
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 537 RMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCL 592
+M+EDG +P+ ++N ++ + G + + E+ +M+ DA + + L
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 200/402 (49%), Gaps = 1/402 (0%)
Query: 228 FPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALG 287
FP V ++ L+SA K+ + I L ++M+ G+ Y+ ++ + + ++ AL
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 288 LVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLG 347
++ +M G + T + L+ G + R+ DA L M++ G KPD LI+ L
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 348 RAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSP 407
+ +A+ L ++M C+P++VTY TV+ L + + A + +KM+ +
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK-RGDIDLALSLLKKMEKGKIEADV 258
Query: 408 FTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLE 467
Y+ +IDG CK ++ A L EM+ KG P Y SLI+ R+ A+ L +
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 468 LKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
+ E + ++ +I F K G+L +A L++EM K PD++TY++L++G
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
+D+A + M C P++ +++ ++ G K+ + ME+F +M + + V+Y T
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
++ +A + A + K M + G + +TY+ +L+ + K
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 191/377 (50%), Gaps = 1/377 (0%)
Query: 250 AIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIK 309
A+ LF +M ++ P+ + L+S K+ + E + L ++M+ G + +YTY+ I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 310 GLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKP 369
R ++ A + M+K G +PDIV +++L+N + R+ DA+ L ++M + KP
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 370 NVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLL 429
+ T+ T+I LF ASEA A ++M G P TY +++G CK ++ A L
Sbjct: 187 DTFTFTTLIHGLFLHN-KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 430 LEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGK 489
L++ME+ Y ++I+G K K + A LF E+ Y+ +I
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 490 CGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINS 549
GR SDA L ++M + + P+V T++AL+ V+ G + +A L M + PDI +
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 550 HNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMN 609
++ ++NG A +F M + P+ V+Y+T++ +A EE L ++M+
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 610 AKGFEYDQITYSSILEA 626
+G + +TY++++
Sbjct: 426 QRGLVGNTVTYTTLIHG 442
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 172/342 (50%), Gaps = 42/342 (12%)
Query: 294 GKGC-----ALTVYTYTELIKG-LGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLG 347
G GC A Y E+++ L +V+DA LF +M+K P IV N L++ +
Sbjct: 35 GSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVA 94
Query: 348 RAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSP 407
+ + E + L +M+ L ++ TY+ I + F ++ S A A KM G P
Sbjct: 95 KMNKFELVISLGEQMQTLGISHDLYTYSIFI-NCFCRRSQLSLALAVLAKMMKLGYEPDI 153
Query: 408 FTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLE 467
T S L++G+C + R+ A L+++M E G+ P + +LI+G LFL
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG------------LFLH 201
Query: 468 LKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
+ S+AV L ++M + C+PD+ TY +++G+ + G
Sbjct: 202 -----------------------NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
ID A SLL++ME+ D+ +N I++GL K A+ +FT+M + I+PD +Y++
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
++ CL G + +A+RL+ DM + + +T+S++++A K
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 148/311 (47%), Gaps = 5/311 (1%)
Query: 119 RNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNK 178
R N T+ ALI + + K +M++ + S ++N +++
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
A +F + S+ C P TY+++I + E+ EL+ EM G +TVTY+ LI
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG-LVGNTVTYTTLI 440
Query: 239 SAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCA 298
F + +A +F +M G+ P Y L+ K G++ KA+ + + ++
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 299 LTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKL 358
+YTY +I+G+ +AG+VED + LF N+ +G P+++ N +I+ R G E+A L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 359 FNKMEALQCKPNVVTYNTVIKSLFESKAPASEASA-WFEKMKANGVLPSPFTYSILIDGF 417
KM+ PN TYNT+I++ + EASA ++M++ G T L+
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARL--RDGDREASAELIKEMRSCGFAGDASTIG-LVTNM 617
Query: 418 CKTNRVEKAHL 428
R++K+ L
Sbjct: 618 LHDGRLDKSFL 628
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 13/278 (4%)
Query: 118 RRNFEHNSTTYMALIR--C----LDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILG 171
+R+ + + TY +LI C LDE + + + M+ C S ++
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHM------FELMISKDCFPNVVTYSTLIKGFC 409
Query: 172 KAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDT 231
KAK V + + +F ++ R TY ++I Q + ++ +M + G P+
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG-VHPNI 468
Query: 232 VTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQE 291
+TY+ L+ K G+ A+ +F+ ++ + ++P Y ++ K G+VE L
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 292 MKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGR 351
+ KG + V Y +I G R G E+A L M ++G P+ N LI R G
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 352 LEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPAS 389
E + +L +M + + T V L + + S
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 251/501 (50%), Gaps = 11/501 (2%)
Query: 135 LDETRMIGVMWKSIQ-DMVRSTC--------VMGPSVLSEIVNILGKAKMVNKALSIFYQ 185
+D +R+ + K+ Q D+V + C LS ++N + + + A S +
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 148
Query: 186 IKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLG 245
I +P T++++I L EG + EL + M G+ PD +T + L++ G
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLCLSG 207
Query: 246 RDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYT 305
++ A+ L D+M E G QP A Y ++++ K G+ A+ L+++M+ + L Y+
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 306 ELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEAL 365
+I GL + G +++A+ LF M +G +I+ N LI AGR +D KL M
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 366 QCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEK 425
+ PNVVT++ +I S F + EA ++M G+ P TY+ LIDGFCK N ++K
Sbjct: 328 KINPNVVTFSVLIDS-FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 426 AHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIK 485
A+ +++ M KG P + LINGY KA R + ELF ++ + Y +I+
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 486 HFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVP 545
F + G+L+ A +LF EM + P++ TY L+ G+ G + A + ++E+
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 546 DINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLM 605
DI +NII++G+ + A ++F + +KP +YN ++G L + G EA L
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 606 KDMNAKGFEYDQITYSSILEA 626
+ M G D TY+ ++ A
Sbjct: 567 RKMEEDGHAPDGWTYNILIRA 587
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 203/402 (50%), Gaps = 3/402 (0%)
Query: 229 PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGL 288
P+T+T+S LI+ GR A+ L D M E G +P TLV+ G+ +A+ L
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 289 VQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGR 348
+ +M GC TY ++ + ++G+ A L M + K D V + +I+ L +
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPF 408
G L++A LFN+ME N++TYN +I F + + + M + P+
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGG-FCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 409 TYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL 468
T+S+LID F K ++ +A L +EM +G P Y SLI+G+ K + AN++ ++L
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM-VDL 393
Query: 469 KEYCGCS-SARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
GC + R + ++I + K R+ D ++LF +M D TYN L+ G G
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
++ A L + M P+I ++ I+L+GL +G ++A+EIF K++ S+++ D YN
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
I+ + A ++A L + KG + TY+ ++ + K
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 194/400 (48%), Gaps = 1/400 (0%)
Query: 228 FPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALG 287
P + +S L SA K + + L +M+ G+ + +++ + + ++ A
Sbjct: 85 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 144
Query: 288 LVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLG 347
+ ++ G T++ LI GL GRV +A L M++ G KPD++ IN L+N L
Sbjct: 145 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 204
Query: 348 RAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSP 407
+G+ +A+ L +KM C+PN VTY V+ + +S A A KM+ +
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL-AMELLRKMEERNIKLDA 263
Query: 408 FTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLE 467
YSI+IDG CK ++ A L EME KG Y LI G+ A R++ +L +
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 468 LKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
+ + + ++V+I F K G+L +A +L EM PD TY +L+ G +
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
+D A ++ M GC P+I + NI++NG K+ +E+F KM + D V+YNT
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
++ G A L ++M ++ + +TY +L+ +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 230/510 (45%), Gaps = 37/510 (7%)
Query: 119 RNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNK 178
+ HN T +I C R + + + ++ +++ S ++N L V++
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
AL + ++ KP T N+++ L G + L ++M G C P+ VTY ++
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG-CQPNAVTYGPVL 235
Query: 239 SAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCA 298
+ K G+ A+ L +M+E ++ A Y+ ++ K G ++ A L EM+ KG
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 299 LTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKL 358
+ TY LI G AGR +D L +M+K P++V + LI+ + G+L +A +L
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 359 FNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFC 418
+M P+ +TY ++I F + +A+ + M + G P+ T++ILI+G+C
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDG-FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 419 KTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLE----------- 467
K NR++ L +M +G Y +LI G+ + + A ELF E
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 468 -----LKEYCGCSSAR-------------------VYAVMIKHFGKCGRLSDAVDLFNEM 503
L C + +Y ++I ++ DA DLF +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 504 KKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGP 563
KP V TYN ++ G+ + G + +A L R+MEEDG PD ++NI++ G
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 594
Query: 564 KRAMEIFTKMQHSEIKPDAVSYNTILGCLS 593
+++++ +++ DA + ++ LS
Sbjct: 595 TKSVKLIEELKRCGFSVDASTIKMVIDMLS 624
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 182/381 (47%), Gaps = 8/381 (2%)
Query: 252 RLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGL 311
R F + L ++ + LV I + + A+ L ++M TV ++ L +
Sbjct: 44 RGFSAFSDRNLSYRERLRSGLVDI-----KADDAIDLFRDMIHSRPLPTVIDFSRLFSAI 98
Query: 312 GRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNV 371
+ + + L M +G ++ ++ +IN R +L A K+ L +PN
Sbjct: 99 AKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNT 158
Query: 372 VTYNTVIKSL-FESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLL 430
+T++T+I L E + SEA ++M G P T + L++G C + + +A LL+
Sbjct: 159 ITFSTLINGLCLEGRV--SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 431 EEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKC 490
++M E G P Y ++N K+ + A EL +++E A Y+++I K
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 491 GRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSH 550
G L +A +LFNEM+ ++ TYN L+ G AG DD LLR M + P++ +
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 551 NIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNA 610
+++++ K G + A E+ +M H I PD ++Y +++ + ++A +++ M +
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 611 KGFEYDQITYSSILEAVGKVD 631
KG + + T++ ++ K +
Sbjct: 397 KGCDPNIRTFNILINGYCKAN 417
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 129/311 (41%), Gaps = 38/311 (12%)
Query: 118 RRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVN 177
R ++ TY +LI + + + + MV C + ++N KA ++
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 178 KALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSAL 237
L +F ++ R TYN++I + G EL+ EM + P+ VTY L
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKIL 479
Query: 238 ISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGC 297
+ G A+ +F++++++ ++
Sbjct: 480 LDGLCDNGESEKALEIFEKIEKSKME---------------------------------- 505
Query: 298 ALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALK 357
L + Y +I G+ A +V+DA+ LF ++ +G KP + N +I L + G L +A
Sbjct: 506 -LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 358 LFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGF 417
LF KME P+ TYN +I++ A+++ E++K G T ++ID
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHL-GDGDATKSVKLIEELKRCGFSVDASTIKMVID-M 622
Query: 418 CKTNRVEKAHL 428
R++K+ L
Sbjct: 623 LSDGRLKKSFL 633
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 167/646 (25%), Positives = 290/646 (44%), Gaps = 65/646 (10%)
Query: 47 PVSKKFARKDTSARKLDERFIRILKIFKWGPDAEKALEVLKMRVDHRLVHQVLNIDVEIN 106
P+ + +++ + + R + IL W +L+ + + V + ++D++
Sbjct: 47 PLLRNLPEEESDSMSVPHRLLSILSKPNW--HKSPSLKSMVSAISPSHVSSLFSLDLDPK 104
Query: 107 VKIQFFKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVL--- 163
+ F W + ++H+ +Y +L+ L +GV++K M++S +G ++
Sbjct: 105 TALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLD 164
Query: 164 ----------------------SEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSM 201
+ ++N L + +V++ ++ ++ K P TYN M
Sbjct: 165 LCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKM 224
Query: 202 ILMLMQEG-------YYEKIHE----------------------------LYNEMCNEGN 226
+ + G Y KI E ++NEM +G
Sbjct: 225 VNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG- 283
Query: 227 CFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKAL 286
C + V Y+ LI R A+ LF +MK++ PT + YT L+ +AL
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 287 GLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVL 346
LV+EM+ G ++TYT LI L + E A L ML++G P+++ N LIN
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 347 GRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPS 406
+ G +EDA+ + ME+ + PN TYN +IK K+ +A KM VLP
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY--CKSNVHKAMGVLNKMLERKVLPD 461
Query: 407 PFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFL 466
TY+ LIDG C++ + A+ LL M ++G P Y S+I+ K+KR E A +LF
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 467 ELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAG 526
L++ + +Y +I + K G++ +A + +M C P+ T+NAL+ G+ G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 527 MIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYN 586
+ +A L +M + G P +++ I+++ L K G A F +M S KPDA +Y
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 587 TILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDE 632
T + R G +A +M M G D TYSS+++ G + +
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 224/463 (48%), Gaps = 3/463 (0%)
Query: 127 TYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQI 186
TY +LI + + + +K +M C + +++ L A+ +++A+ +F ++
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 187 KSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGR 246
K +C PT TY +I L + L EM E P+ TY+ LI + +
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-EETGIKPNIHTYTVLIDSLCSQCK 373
Query: 247 DISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTE 306
A L +M E GL P Y L++ Y K G +E A+ +V+ M+ + + TY E
Sbjct: 374 FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Query: 307 LIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQ 366
LIKG ++ V A G+ ML+ PD+V N+LI+ R+G + A +L + M
Sbjct: 434 LIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 367 CKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKA 426
P+ TY ++I SL +SK EA F+ ++ GV P+ Y+ LIDG+CK +V++A
Sbjct: 493 LVPDQWTYTSMIDSLCKSKR-VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 427 HLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKH 486
HL+LE+M K P + +LI+G + + A L ++ + + ++I
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 487 FGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPD 546
K G A F +M KPD +TY + R G + DA ++ +M E+G PD
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 547 INSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTIL 589
+ +++ ++ G G A ++ +M+ + +P ++ +++
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 239/543 (44%), Gaps = 57/543 (10%)
Query: 124 NSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIF 183
N Y LI L R I M C + ++ L ++ ++AL++
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 184 YQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGK 243
+++ KP +TY +I L + +EK EL +M +G P+ +TY+ALI+ + K
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG-LMPNVITYNALINGYCK 405
Query: 244 LGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYT 303
G A+ + + M+ L P + Y L+ Y K V KA+G++ +M + V T
Sbjct: 406 RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVT 464
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKME 363
Y LI G R+G + AY L M G PD ++I+ L ++ R+E+A LF+ +E
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 364 ALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRV 423
PNVV Y +I ++ EA EKM + LP+ T++ LI G C ++
Sbjct: 525 QKGVNPNVVMYTALIDGYCKA-GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 424 EKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVM 483
++A LL E+M + G P + LI+ K ++ A F ++ A Y
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 484 IKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGC 543
I+ + + GRL DA D+ +M++ PD++TY++L+ G G + A+ +L+RM + GC
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 544 -----------------------------------------------------VPDINSH 550
P+ S+
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSY 763
Query: 551 NIILNGLAKSGGPKRAMEIFTKMQHSE-IKPDAVSYNTILGCLSRAGMFEEAARLMKDMN 609
++ G+ + G + A ++F MQ +E I P + +N +L C + EAA+++ DM
Sbjct: 764 EKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI 823
Query: 610 AKG 612
G
Sbjct: 824 CVG 826
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 186/415 (44%), Gaps = 19/415 (4%)
Query: 164 SEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCN 223
+ +++ L K+K V +A +F ++ + P Y ++I + G ++ H + +M +
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 224 EGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVE 283
+ NC P+++T++ALI G+ A L ++M + GLQPT T L+ K G+ +
Sbjct: 561 K-NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 284 KALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLI 343
A Q+M G +TYT I+ R GR+ DA + M + G PD+ ++LI
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 344 NVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEAS----------- 392
G G+ A + +M C+P+ T+ ++IK L E K + S
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 393 ------AWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEE-KGFPPCPAAY 445
EKM + V P+ +Y LI G C+ + A + + M+ +G P +
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 446 CSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKK 505
+L++ K K++ A ++ ++ V+I K G +F + +
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Query: 506 LRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKS 560
D + ++ G+ + G+++ Y L ME++GC ++++++ G S
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEGPPDS 914
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 256/516 (49%), Gaps = 12/516 (2%)
Query: 133 RCLDETRMIGVMWKSIQ-DMVRSTC--------VMGPSVLSEIVNILGKAKMVNKALSIF 183
R +D +R+ V+ ++ Q D+V C LS ++N + + ++ A S
Sbjct: 71 RLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAM 130
Query: 184 YQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGK 243
+I +P T++++I L EG + EL + M G+ P +T +AL++
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH-KPTLITLNALVNGLCL 189
Query: 244 LGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYT 303
G+ A+ L D M E G QP Y ++ + K G+ A+ L+++M+ + L
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKME 363
Y+ +I GL + G +++A+ LF M +G K DI++ LI AGR +D KL M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 364 ALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRV 423
+ P+VV ++ +I F + EA ++M G+ P TY+ LIDGFCK N++
Sbjct: 310 KRKITPDVVAFSALIDC-FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 424 EKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVM 483
+KA+ +L+ M KG P + LINGY KA + ELF ++ + Y +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 484 IKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGC 543
I+ F + G+L A +LF EM R +PD+ +Y L+ G+ G + A + ++E+
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 544 VPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAAR 603
DI +NII++G+ + A ++F + +KPD +YN ++G L + G EA
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 604 LMKDMNAKGFEYDQITYSSILEA-VGKVDEDRNPTL 638
L + M G + TY+ ++ A +G+ D ++ L
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 194/414 (46%), Gaps = 36/414 (8%)
Query: 249 SAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYT----- 303
A+ LF EM + +P ++ L S+ + + + L L ++M+ KG A +YT
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 304 ------------------------------YTELIKGLGRAGRVEDAYGLFMNMLKEGCK 333
++ LI GL GRV +A L M++ G K
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 334 PDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASA 393
P ++ +N L+N L G++ DA+ L ++M +PN VTY V+K + +S A A
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL-AME 233
Query: 394 WFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYG 453
KM+ + YSI+IDG CK ++ A L EME KGF Y +LI G+
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 454 KAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVY 513
A R++ +L ++ + ++ +I F K G+L +A +L EM + PD
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 514 TYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKM 573
TY +L+ G + +D A +L M GC P+I + NI++NG K+ +E+F KM
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 574 QHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
+ D V+YNT++ G E A L ++M ++ D ++Y +L+ +
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 42/313 (13%)
Query: 118 RRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSV--LSEIVNILGKAKM 175
+R ++ TY +LI + + + MV C GP++ + ++N KA +
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC--GPNIRTFNILINGYCKANL 402
Query: 176 VNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYS 235
++ L +F ++ R TYN++I + G E EL+ EM + PD V+Y
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-RVRPDIVSYK 461
Query: 236 ALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGK 295
L+ D + +NG E EKAL + ++++
Sbjct: 462 ILL----------------DGLCDNG-------------------EPEKALEIFEKIEKS 486
Query: 296 GCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDA 355
L + Y +I G+ A +V+DA+ LF ++ +G KPD+ N +I L + G L +A
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 356 LKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILID 415
LF KME PN TYN +I++ + A++++ E++K G T +++D
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHL-GEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Query: 416 GFCKTNRVEKAHL 428
R++K+ L
Sbjct: 606 -MLSDGRLKKSFL 617
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/541 (28%), Positives = 256/541 (47%), Gaps = 81/541 (14%)
Query: 166 IVNILGK-AKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNE 224
I+N+ GK NK S+ ++KS P A TYN++I + +++ +++ EM
Sbjct: 249 ILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA 308
Query: 225 GNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEK 284
G + D VTY+AL+ +GK R A+++ +EM NG P+ Y +L+S Y + G +++
Sbjct: 309 GFSY-DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 367
Query: 285 ALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLIN 344
A+ L +M KG V+TYT L+ G RAG+VE A +F M GCKP+I N I
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 345 VLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVL 404
+ G G+ + +K+F+++ P++VT+NT++ ++F SE S F++MK G +
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL-AVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 405 PSPFTYSILIDGFCKTNRVEKA-----------------------------------HLL 429
P T++ LI + + E+A +
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 430 LEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHF-- 487
L EME+ P YCSL++ Y K + L E+ Y G R AV++K
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV--YSGVIEPR--AVLLKTLVL 602
Query: 488 --GKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVP 545
KC L +A F+E+K+ PD+ T N+++S R M+ A +L M+E G P
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Query: 546 -----------------------------------DINSHNIILNGLAKSGGPKRAMEIF 570
DI S+N ++ ++ + A IF
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 571 TKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKV 630
++M++S I PD ++YNT +G + MFEEA +++ M G +Q TY+SI++ K+
Sbjct: 723 SEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Query: 631 D 631
+
Sbjct: 783 N 783
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 152/574 (26%), Positives = 258/574 (44%), Gaps = 116/574 (20%)
Query: 161 SVLSEIVNILGK-------AKMVN----------------------------KALSIFYQ 185
SV++ I+++LGK A M N +A+++F +
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 186 IKSRKCKPT------------------------------------ANTYNSMILMLMQEG 209
++ CKPT A TYN++I +
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 210 YYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIY 269
+++ +++ EM G + D VTY+AL+ +GK R A+++ +EM NG P+ Y
Sbjct: 294 LHQEAAQVFEEMKAAGFSY-DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 270 TTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLK 329
+L+S Y + G +++A+ L +M KG V+TYT L+ G RAG+VE A +F M
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 330 EGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPAS 389
GCKP+I N I + G G+ + +K+F+++ P++VT+NT++ ++F S
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL-AVFGQNGMDS 471
Query: 390 EASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKA----------------------- 426
E S F++MK G +P T++ LI + + E+A
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 427 ------------HLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGC 474
+L EME+ P YCSL++ Y K + L E+ Y G
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV--YSGV 589
Query: 475 SSARVYAVMIKHF----GKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDD 530
R AV++K KC L +A F+E+K+ PD+ T N+++S R M+
Sbjct: 590 IEPR--AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 531 AYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILG 590
A +L M+E G P + ++N ++ ++S ++ EI ++ IKPD +SYNT++
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 707
Query: 591 CLSRAGMFEEAARLMKDMNAKGFEYDQITYSSIL 624
R +A+R+ +M G D ITY++ +
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 210/399 (52%), Gaps = 4/399 (1%)
Query: 230 DTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLV 289
D + +IS GK GR SA +F+ ++E+G YT+L+S + G +A+ +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 290 QEMKGKGCALTVYTYTELIKGLGRAGRVEDAY-GLFMNMLKEGCKPDIVLINNLINVLGR 348
++M+ GC T+ TY ++ G+ G + L M +G PD N LI R
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPF 408
++A ++F +M+A + VTYN ++ +S P EA +M NG PS
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP-KEAMKVLNEMVLNGFSPSIV 350
Query: 409 TYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL 468
TY+ LI + + +++A L +M EKG P Y +L++G+ +A + E+A +F E+
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 469 KEYCGC-SSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
+ GC + + IK +G G+ ++ + +F+E+ PD+ T+N L++ + GM
Sbjct: 411 RN-AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
+ + + M+ G VP+ + N +++ ++ G ++AM ++ +M + + PD +YNT
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
+L L+R GM+E++ +++ +M + +++TY S+L A
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 174/323 (53%)
Query: 307 LIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQ 366
+I LG+ GRV A +F + ++G D+ +LI+ +GR +A+ +F KME
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 367 CKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKA 426
CKP ++TYN ++ + P ++ ++ EKMK++G+ P +TY+ LI + + ++A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 427 HLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKH 486
+ EEM+ GF Y +L++ YGK+ R + A ++ E+ S Y +I
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 487 FGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPD 546
+ + G L +A++L N+M + KPDV+TY L+SG RAG ++ A S+ M GC P+
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 547 INSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMK 606
I + N + G M+IF ++ + PD V++NT+L + GM E + + K
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 607 DMNAKGFEYDQITYSSILEAVGK 629
+M GF ++ T+++++ A +
Sbjct: 479 EMKRAGFVPERETFNTLISAYSR 501
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 225/490 (45%), Gaps = 6/490 (1%)
Query: 121 FEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLS--EIVNILGKAKMVNK 178
F ++ TY AL+ ++ K + +MV + PS+++ +++ + M+++
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG--FSPSIVTYNSLISAYARDGMLDE 367
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
A+ + Q+ + KP TY +++ + G E ++ EM N G C P+ T++A I
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFI 426
Query: 239 SAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCA 298
+G G+ +++FDE+ GL P + TL++++ + G + G+ +EMK G
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 299 LTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKL 358
T+ LI R G E A ++ ML G PD+ N ++ L R G E + K+
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 359 FNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFC 418
+ME +CKPN +TY +++ + K S E++ + + P L+
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS-LAEEVYSGVIEPRAVLLKTLVLVCS 605
Query: 419 KTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSAR 478
K + + +A E++E+GF P S+++ YG+ + AN + +KE S
Sbjct: 606 KCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMA 665
Query: 479 VYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRM 538
Y ++ + + ++ E+ KPD+ +YN ++ R + DA + M
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 539 EEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMF 598
G VPD+ ++N + A + A+ + M +P+ +YN+I+ +
Sbjct: 726 RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRK 785
Query: 599 EEAARLMKDM 608
+EA ++D+
Sbjct: 786 DEAKLFVEDL 795
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 36/168 (21%)
Query: 161 SVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHEL--- 217
+ L+ +V+I G+ +MV KA + +K R P+ TYNS++ M + + K E+
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 218 --------------------------------YNEMCNEGNCFPDTVTYSALISAFGKLG 245
++EM N G PD +TY+ I ++
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG-IVPDVITYNTFIGSYAADS 748
Query: 246 RDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMK 293
AI + M ++G +P Y ++V Y KL ++A V++++
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 552 IILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAK 611
II++ L K G A +F +Q D SY +++ + +G + EA + K M
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 612 GFEYDQITYSSILEAVGKVDEDRN 635
G + ITY+ IL GK+ N
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWN 261
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/554 (28%), Positives = 263/554 (47%), Gaps = 21/554 (3%)
Query: 69 ILKIFKWGPDAEKALEVLKMRVDHRLVHQVLNIDVEIN----VKIQFFK---WAGRRRNF 121
IL + W D ++ D +++LN+ V+ N V+I K W
Sbjct: 137 ILSVVDWMIDE------FGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG-----I 185
Query: 122 EHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALS 181
+ + +T+ LI+ L + ++DM V + ++ + ++ AL
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 182 IFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAF 241
I Q+ C + + N ++ +EG E EM N+ FPD T++ L++
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 242 GKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTV 301
K G AI + D M + G P Y +++S KLGEV++A+ ++ +M + C+
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 302 YTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNK 361
TY LI L + +VE+A L + +G PD+ N+LI L A++LF +
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 362 MEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTN 421
M + C+P+ TYN +I SL SK EA ++M+ +G S TY+ LIDGFCK N
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLC-SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 422 RVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYA 481
+ +A + +EME G Y +LI+G K++R E A +L ++ Y
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 482 VMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEED 541
++ HF + G + A D+ M C+PD+ TY L+SG+ +AG ++ A LLR ++
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 542 GCVPDINSHNIILNGLAKSGGPKRAMEIFTKM-QHSEIKPDAVSYNTIL-GCLSRAGMFE 599
G +++N ++ GL + A+ +F +M + +E PDAVSY + G + G
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIR 664
Query: 600 EAARLMKDMNAKGF 613
EA + ++ KGF
Sbjct: 665 EAVDFLVELLEKGF 678
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 265/558 (47%), Gaps = 43/558 (7%)
Query: 109 IQFFKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVN 168
++ F A ++ NF Y ++ L + M K ++DM S C MG S ++
Sbjct: 67 LRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIE 126
Query: 169 ILGKAKMVNKALSIF-YQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNC 227
+ ++ ++ LS+ + I KP + YN M L L+ +G K+ E+ + +
Sbjct: 127 SYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRM-LNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 228 FPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYF---------- 277
PD T++ LI A + + AI + ++M GL P K +TT++ Y
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 278 -------------------------KLGEVEKALGLVQEMKGK-GCALTVYTYTELIKGL 311
K G VE AL +QEM + G YT+ L+ GL
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 312 GRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNV 371
+AG V+ A + ML+EG PD+ N++I+ L + G +++A+++ ++M C PN
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 372 VTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLE 431
VTYNT+I +L + EA+ + + G+LP T++ LI G C T A L E
Sbjct: 366 VTYNTLISTLCKENQ-VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 432 EMEEKGFPPCPAAYCSLINGY-GKAKRYEAANELFLELKEYCGCS-SARVYAVMIKHFGK 489
EM KG P Y LI+ K K EA N L+ E GC+ S Y +I F K
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN--MLKQMELSGCARSVITYNTLIDGFCK 482
Query: 490 CGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINS 549
+ +A ++F+EM+ + TYN L+ G+ ++ ++DA L+ +M +G PD +
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 550 HNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMN 609
+N +L + G K+A +I M + +PD V+Y T++ L +AG E A++L++ +
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 610 AKGFEYDQITYSSILEAV 627
KG Y+ +++ +
Sbjct: 603 MKGINLTPHAYNPVIQGL 620
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 194/420 (46%), Gaps = 3/420 (0%)
Query: 217 LYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIY 276
L+N + N P+ Y ++ G+ G ++ ++MK + + + L+ Y
Sbjct: 69 LFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESY 128
Query: 277 FKLGEVEKALGLVQEMKGK-GCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPD 335
+ ++ L +V M + G + Y ++ L ++ M G KPD
Sbjct: 129 AQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPD 188
Query: 336 IVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWF 395
+ N LI L RA +L A+ + M + P+ T+ TV++ E + A
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE-EGDLDGALRIR 247
Query: 396 EKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEME-EKGFPPCPAAYCSLINGYGK 454
E+M G S + ++++ GFCK RVE A ++EM + GF P + +L+NG K
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 455 AKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYT 514
A + A E+ + + Y +I K G + +AV++ ++M C P+ T
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 515 YNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQ 574
YN L+S + + +++A L R + G +PD+ + N ++ GL + + AME+F +M+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 575 HSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDEDR 634
+PD +YN ++ L G +EA ++K M G ITY+++++ K ++ R
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 131/265 (49%), Gaps = 6/265 (2%)
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
A+ +F +++S+ C+P TYN +I L +G ++ + +M G C +TY+ LI
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG-CARSVITYNTLI 477
Query: 239 SAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCA 298
F K + A +FDEM+ +G+ + Y TL+ K VE A L+ +M +G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 299 LTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKL 358
YTY L+ R G ++ A + M GC+PDIV LI+ L +AGR+E A KL
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 359 FN--KMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
+M+ + P+ YN VI+ LF + + + E ++ N P +Y I+ G
Sbjct: 598 LRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Query: 417 FCK-TNRVEKAHLLLEEMEEKGFPP 440
C + +A L E+ EKGF P
Sbjct: 656 LCNGGGPIREAVDFLVELLEKGFVP 680
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 164/389 (42%), Gaps = 74/389 (19%)
Query: 247 DISAIRLFD-EMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYT 305
D +A+RLF+ K+ P +Y ++ + G + ++++MK C + T+
Sbjct: 63 DSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFL 122
Query: 306 ELIKGLGRAGRVEDAYGLFMNMLKE-GCKPDIVLINNLINVLGRAGRLEDALKLFNKMEA 364
LI+ + ++ + M+ E G KPD N ++N+L ++LKL A
Sbjct: 123 ILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG----NSLKLVEISHA 178
Query: 365 LQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVE 424
KM G+ P T+++LI C+ +++
Sbjct: 179 --------------------------------KMSVWGIKPDVSTFNVLIKALCRAHQLR 206
Query: 425 KAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMI 484
A L+LE+M G P + +++ GY + + A + ++ E+ GCS + V
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF-GCSWSNV----- 260
Query: 485 KHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRME-EDGC 543
+ N ++ G + G ++DA + ++ M +DG
Sbjct: 261 -----------------------------SVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 544 VPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAAR 603
PD + N ++NGL K+G K A+EI M PD +YN+++ L + G +EA
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 604 LMKDMNAKGFEYDQITYSSILEAVGKVDE 632
++ M + + +TY++++ + K ++
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQ 380
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 236/464 (50%), Gaps = 2/464 (0%)
Query: 163 LSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMC 222
LS ++N + + ++ A S +I +P +N+++ L E + EL + M
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 223 NEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEV 282
G+ P +T + L++ G+ A+ L D M E G QP Y ++++ K G+
Sbjct: 186 EMGH-KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 283 EKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNL 342
A+ L+++M+ + L Y+ +I GL + G +++A+ LF M +G K DI+ N L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 343 INVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANG 402
I AGR +D KL M + PNVVT++ +I S F + EA ++M G
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS-FVKEGKLREADQLLKEMMQRG 363
Query: 403 VLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAAN 462
+ P+ TY+ LIDGFCK NR+E+A +++ M KG P + LINGY KA R +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 463 ELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGM 522
ELF E+ ++ Y +++ F + G+L A LF EM R +PD+ +Y L+ G+
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 523 VRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDA 582
G ++ A + ++E+ DI + II++G+ + A ++F + +K DA
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 583 VSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
+YN ++ L R +A L + M +G D++TY+ ++ A
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 230/490 (46%), Gaps = 37/490 (7%)
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG----------- 225
+ A+ +F + + PT +N + + + YE + L +M ++G
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 226 -NCF----------------------PDTVTYSALISAFGKLGRDISAIRLFDEMKENGL 262
NCF PDTV ++ L++ R A+ L D M E G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 263 QPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYG 322
+PT TLV+ G+V A+ L+ M G TY ++ + ++G+ A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 323 LFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLF 382
L M + K D V + +I+ L + G L++A LFN+ME K +++TYNT+I F
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG-F 308
Query: 383 ESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCP 442
+ + + M + P+ T+S+LID F K ++ +A LL+EM ++G P
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 443 AAYCSLINGYGKAKRYEAANELFLELKEYCGCS-SARVYAVMIKHFGKCGRLSDAVDLFN 501
Y SLI+G+ K R E A ++ ++L GC + ++I + K R+ D ++LF
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQM-VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 502 EMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSG 561
EM + TYN L+ G ++G ++ A L + M PDI S+ I+L+GL +G
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 562 GPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYS 621
++A+EIF K++ S+++ D Y I+ + A ++A L + KG + D Y+
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Query: 622 SILEAVGKVD 631
++ + + D
Sbjct: 548 IMISELCRKD 557
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 205/416 (49%), Gaps = 12/416 (2%)
Query: 166 IVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG 225
++N++ K+ A+ + +++ R K A Y+ +I L ++G + L+NEM +G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 226 NCF-PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEK 284
F D +TY+ LI F GR +L +M + + P ++ L+ + K G++ +
Sbjct: 294 --FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 285 ALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLIN 344
A L++EM +G A TY LI G + R+E+A + M+ +GC PDI+ N LIN
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 345 VLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVL 404
+A R++D L+LF +M N VTYNT+++ +S A F++M + V
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS-GKLEVAKKLFQEMVSRRVR 470
Query: 405 PSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANEL 464
P +Y IL+DG C +EKA + ++E+ Y +I+G A + + A +L
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 465 FLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVR 524
F L AR Y +MI + LS A LF +M + PD TYN L +R
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL----IR 586
Query: 525 AGMIDD----AYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHS 576
A + DD A L+ M+ G D+++ +++N L+ K +++ + + S
Sbjct: 587 AHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRAS 642
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 181/381 (47%), Gaps = 8/381 (2%)
Query: 252 RLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGL 311
R F + L K+ + LV I + + A+ L ++M TV + L +
Sbjct: 44 RGFSTFSDRNLSYRDKLSSGLVGI-----KADDAVDLFRDMIQSRPLPTVIDFNRLFSAI 98
Query: 312 GRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNV 371
+ + E L M +G I ++ +IN R +L A K+ L +P+
Sbjct: 99 AKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDT 158
Query: 372 VTYNTVIKSL-FESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLL 430
V +NT++ L E + SEA ++M G P+ T + L++G C +V A +L+
Sbjct: 159 VIFNTLLNGLCLECRV--SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 431 EEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKC 490
+ M E GF P Y ++N K+ + A EL +++E A Y+++I K
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 491 GRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSH 550
G L +A +LFNEM+ K D+ TYN L+ G AG DD LLR M + P++ +
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 551 NIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNA 610
+++++ K G + A ++ +M I P+ ++YN+++ + EEA +++ M +
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 611 KGFEYDQITYSSILEAVGKVD 631
KG + D +T++ ++ K +
Sbjct: 397 KGCDPDIMTFNILINGYCKAN 417
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 222/447 (49%), Gaps = 38/447 (8%)
Query: 216 ELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSI 275
++++ M E C P++V+YS LI ++GR A L D+M E G QP+ + YT L+
Sbjct: 251 KVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKA 310
Query: 276 YFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPD 335
G ++KA L EM +GC V+TYT LI GL R G++E+A G+ M+K+ P
Sbjct: 311 LCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370
Query: 336 IVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWF 395
++ N LIN + GR+ A +L ME CKPNV T+N +++ L P +A
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY-KAVHLL 429
Query: 396 EKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKA 455
++M NG+ P +Y++LIDG C+ + A+ LL M P + ++IN + K
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489
Query: 456 KRYEAANELFLELKEYCGCSSARVYA-VMIKHFGKCGRLSDAVDLFNEMKKLR------- 507
+ + A+ FL L G S V +I K G+ DA+ + + K+R
Sbjct: 490 GKADVASA-FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 508 -----------CK-----------------PDVYTYNALMSGMVRAGMIDDAYSLLRRME 539
CK P V TY L+ G++R+G I ++ +L M+
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 540 EDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFE 599
GC+P++ + II+NGL + G + A ++ + MQ S + P+ V+Y ++ G +
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 600 EAARLMKDMNAKGFEYDQITYSSILEA 626
A ++ M +G+E + YSS+L+
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLLQG 695
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 197/403 (48%), Gaps = 37/403 (9%)
Query: 234 YSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMK 293
YS+L+ + KL A + M+ +G Y T+V+ K G E A + ++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 294 GKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKE-GCKPDIVLINNLINVLGRAGRL 352
G L + T L+ G R + DA +F M KE C P+ V + LI+ L GRL
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 353 EDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSI 412
E+A L ++M C+P+ TY +IK+L + + +A F++M G P+ TY++
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCD-RGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 413 LIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYC 472
LIDG C+ ++E+A+ + +M + P Y +LINGY K
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD----------------- 384
Query: 473 GCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAY 532
GR+ A +L M+K CKP+V T+N LM G+ R G A
Sbjct: 385 ------------------GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 533 SLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCL 592
LL+RM ++G PDI S+N++++GL + G A ++ + M +I+PD +++ I+
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 593 SRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDEDRN 635
+ G + A+ + M KG D++T +++++ V KV + R+
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRD 529
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 218/506 (43%), Gaps = 52/506 (10%)
Query: 136 DETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTA 195
D ++ VM K + TC S +++ L + + +A + Q+ + C+P+
Sbjct: 248 DALKVFDVMSKEV------TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 196 NTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFD 255
TY +I L G +K L++EM G C P+ TY+ LI + G+ A +
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRG-CKPNVHTYTVLIDGLCRDGKIEEANGVCR 360
Query: 256 EMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAG 315
+M ++ + P+ Y L++ Y K G V A L+ M+ + C V T+ EL++GL R G
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 316 RVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYN 375
+ A L ML G PDIV N LI+ L R G + A KL + M +P+ +T+
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 376 TVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLE---- 431
+I + F + A ASA+ M G+ T + LIDG CK + A +LE
Sbjct: 481 AIINA-FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Query: 432 -------------------------------EMEEKGFPPCPAAYCSLINGYGKAKRYEA 460
++ + G P Y +L++G ++
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 461 ANELFLELKEYCGC-SSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALM 519
+ + LEL + GC + Y ++I + GR+ +A L + M+ P+ TY ++
Sbjct: 600 SFRI-LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658
Query: 520 SGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNG--LAKSGGPKRAMEIFTKMQHSE 577
G V G +D A +R M E G + ++ +L G L++ G + + E
Sbjct: 659 KGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRE 718
Query: 578 IKPDAVS-----YNTILGCLSRAGMF 598
P+ ++ + GC+S +F
Sbjct: 719 TDPECINELISVVEQLGGCISGLCIF 744
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 126/521 (24%), Positives = 215/521 (41%), Gaps = 76/521 (14%)
Query: 119 RNFEHNSTTYMALIRCLDETRMI----GVMWKSIQDMVRSTCVMGPSVLS--EIVNILGK 172
R + N TY LI L I GV K ++D + PSV++ ++N K
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF------PSVITYNALINGYCK 383
Query: 173 AKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTV 232
V A + ++ R CKP T+N ++ L + G K L M + G PD V
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG-LSPDIV 442
Query: 233 TYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEM 292
+Y+ LI + G +A +L M ++P +T +++ + K G+ + A + M
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 293 KGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRL 352
KG +L T T LI G+ + G+ DA + ++K +N ++++L + ++
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 562
Query: 353 EDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSI 412
++ L + K+ L P+VVTY T++ L S + + E MK +G LP+ + Y+I
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRS-GDITGSFRILELMKLSGCLPNVYPYTI 621
Query: 413 LIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGY---GKAKRY----------- 458
+I+G C+ RVE+A LL M++ G P Y ++ GY GK R
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Query: 459 ----------------------------------------EAANELFLELKEYCGCSSAR 478
E NEL +++ GC S
Sbjct: 682 YELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISG- 740
Query: 479 VYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNAL---MSGMVRAGMIDDAYSLL 535
+ ++ K GR ++ DL + + V+ A+ M L+
Sbjct: 741 LCIFLVTRLCKEGRTDESNDLVQNV----LERGVFLEKAMDIIMESYCSKKKHTKCMELI 796
Query: 536 RRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHS 576
+ + G VP S +++ GL K G +RA E+ ++ S
Sbjct: 797 TLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTS 837
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 155/366 (42%), Gaps = 37/366 (10%)
Query: 148 IQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQ 207
++ +V+ + P L+ I+++L K V + L++ +I P+ TY +++ L++
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 208 EGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAK 267
G + E+ C P+ Y+ +I+ + GR A +L M+++G+ P
Sbjct: 594 SGDITGSFRIL-ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 268 IYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNM 327
YT +V Y G++++AL V+ M +G L Y+ L++G + + D
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNS------ 706
Query: 328 LKEGCKPDIVL-------INNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKS 380
+E DI L IN LI+V+ + G L +F + CK
Sbjct: 707 -EESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCK------------ 751
Query: 381 LFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPP 440
+ E++ + + GV I+++ +C + K L+ + + GF P
Sbjct: 752 ----EGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVP 806
Query: 441 CPAAYCSLINGYGKAKRYEAANELFLELKEYCGC---SSARVYAVMIKHFGKCGRLSDAV 497
++C +I G K E A EL +EL G S Y + + G S+ +
Sbjct: 807 SFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVI 866
Query: 498 DLFNEM 503
DL +++
Sbjct: 867 DLVDQL 872
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 254/527 (48%), Gaps = 9/527 (1%)
Query: 105 INVKIQFFKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLS 164
+ + + FFK F+H T+ +IR L + + +Q M +
Sbjct: 56 VPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI 115
Query: 165 EIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNE 224
++++ + + +A+ +FY+IK C P+ YN ++ L+ E + I+ +Y +M +
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 175
Query: 225 GNCF-PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVE 283
G F P+ TY+ L+ A K + A +L EM G P A YTT++S ++G V+
Sbjct: 176 G--FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 284 KALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLI 343
+ L + + V Y LI GL + + A+ L M+++G P+++ + LI
Sbjct: 234 EGRELAERFEP-----VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 344 NVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGV 403
NVL +G++E A +M C PN+ T ++++K F W + ++ G+
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGL 348
Query: 404 LPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANE 463
P+ Y+ L+ GFC + KA + MEE G P Y SLING+ K + A
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVY 408
Query: 464 LFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMV 523
++ ++ C + VY M++ + + +A L M K C P V T+NA + G+
Sbjct: 409 IWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLC 468
Query: 524 RAGMIDDAYSLLRRMEEDG-CVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDA 582
AG +D A + R+ME+ C P+I ++N +L+GLAK+ + A + ++ ++ +
Sbjct: 469 DAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSS 528
Query: 583 VSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
+YNT+L AG+ A +L+ M G D+IT + I+ A K
Sbjct: 529 STYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 206/413 (49%), Gaps = 15/413 (3%)
Query: 226 NCFPDT-VTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEK 284
N F T +T+ +I G+ S L +MK G + ++ +++S+Y ++G E+
Sbjct: 70 NLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAER 129
Query: 285 ALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLIN 344
A+ + +K GC +V Y ++ L R++ Y ++ +M ++G +P++ N L+
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189
Query: 345 VLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVL 404
L + +++ A KL +M C P+ V+Y TVI S+ E E E+ +
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV-GLVKEGRELAERFE----- 243
Query: 405 PSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANEL 464
P Y+ LI+G CK + + A L+ EM EKG P +Y +LIN + + E A
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 465 FLELKEYCGCSSARVYAV--MIKHFGKCGRLSDAVDLFNEM-KKLRCKPDVYTYNALMSG 521
++ + GC +Y + ++K G DA+DL+N+M + +P+V YN L+ G
Sbjct: 304 LTQMLKR-GC-HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 522 MVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPD 581
G I A S+ MEE GC P+I ++ ++NG AK G A+ I+ KM S P+
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421
Query: 582 AVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV---GKVD 631
V Y ++ L R F+EA L++ M+ + T+++ ++ + G++D
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 474
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/536 (24%), Positives = 240/536 (44%), Gaps = 46/536 (8%)
Query: 63 DERFIRILKIFKWGPDAEKALEVLKMRVDH-------RLVHQVLNIDVEINVKIQFFKWA 115
++ FI ++ +++ AE+A+E+ R+ ++ + VL+ + N +IQ
Sbjct: 111 EDLFISVISVYRQVGLAERAVEMF-YRIKEFGCDPSVKIYNHVLDTLLGEN-RIQMIYMV 168
Query: 116 GR---RRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDM---------------VRSTCV 157
R R FE N TY L++ L + + K + +M + S C
Sbjct: 169 YRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE 228
Query: 158 MG---------------PSVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMI 202
+G SV + ++N L K A + ++ + P +Y+++I
Sbjct: 229 VGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 203 LMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEM-KENG 261
+L G E +M G C P+ T S+L+ G A+ L+++M + G
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRG-CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG 347
Query: 262 LQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAY 321
LQP Y TLV + G + KA+ + M+ GC+ + TY LI G + G ++ A
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 322 GLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSL 381
++ ML GC P++V+ N++ L R + ++A L M C P+V T+N IK L
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 382 FESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPC 441
++ + + + + P+ TY+ L+DG K NR+E+A+ L E+ +G
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527
Query: 442 PAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFN 501
+ Y +L++G A A +L ++ ++I + K G+ A + +
Sbjct: 528 SSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD 587
Query: 502 EMK--KLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILN 555
+ + + +PDV +Y ++ G+ R+ +D LL RM G VP I + ++++N
Sbjct: 588 LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 41/288 (14%)
Query: 178 KALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSAL 237
KA+S+F ++ C P TY S+I + G + ++N+M G C P+ V Y+ +
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG-CCPNVVVYTNM 428
Query: 238 ISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG- 296
+ A + + A L + M + P+ + + G ++ A + ++M+ +
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGL----FM--------------------------- 325
C + TY EL+ GL +A R+E+AYGL FM
Sbjct: 489 CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIAL 548
Query: 326 ----NMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEA--LQCKPNVVTYNTVIK 379
M+ +G PD + +N +I + G+ E A ++ + + + +P+V++Y VI
Sbjct: 549 QLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIW 608
Query: 380 SLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAH 427
L S + E+M + G++PS T+S+LI+ F + V +AH
Sbjct: 609 GLCRSNC-REDGVILLERMISAGIVPSIATWSVLINCFILDDIV-RAH 654
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 235/464 (50%), Gaps = 4/464 (0%)
Query: 163 LSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMC 222
S +VN V++A+++ ++ K +P T +++I L +G + L + M
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 223 NEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEV 282
G PD VTY +++ K G A+ LF +M+E ++ + Y+ ++ K G
Sbjct: 203 EYG-FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 283 EKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNL 342
+ AL L EM+ KG V TY+ LI GL G+ +D + M+ PD+V + L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 343 INVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANG 402
I+V + G+L +A +L+N+M P+ +TYN++I F + EA+ F+ M + G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG-FCKENCLHEANQMFDLMVSKG 380
Query: 403 VLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAAN 462
P TYSILI+ +CK RV+ L E+ KG P Y +L+ G+ ++ + AA
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 463 ELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGM 522
ELF E+ S Y +++ G L+ A+++F +M+K R + YN ++ GM
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 523 VRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDA 582
A +DDA+SL + + G PD+ ++N+++ GL K G A +F KM+ PD
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 583 VSYNTIL-GCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILE 625
+YN ++ L +G+ + L+++M GF D T +++
Sbjct: 561 FTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSADSSTIKMVID 603
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/461 (29%), Positives = 221/461 (47%), Gaps = 2/461 (0%)
Query: 166 IVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG 225
++N + K + A S+ + +P T+++++ EG + L + M E
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV-EM 169
Query: 226 NCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKA 285
PD VT S LI+ GR A+ L D M E G QP Y +++ K G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 286 LGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINV 345
L L ++M+ + +V Y+ +I L + G +DA LF M +G K D+V ++LI
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 346 LGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLP 405
L G+ +D K+ +M P+VVT++ +I +F + EA + +M G+ P
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI-DVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 406 SPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELF 465
TY+ LIDGFCK N + +A+ + + M KG P Y LIN Y KAKR + LF
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 466 LELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRA 525
E+ + Y ++ F + G+L+ A +LF EM P V TY L+ G+
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 526 GMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSY 585
G ++ A + +M++ I +NII++G+ + A +F + +KPD V+Y
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 586 NTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
N ++G L + G EA L + M G D TY+ ++ A
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 190/400 (47%), Gaps = 1/400 (0%)
Query: 228 FPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALG 287
P + ++ L SA + + + M+ NG++ T +++ Y + ++ A
Sbjct: 67 LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 126
Query: 288 LVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLG 347
++ G T++ L+ G GRV +A L M++ +PD+V ++ LIN L
Sbjct: 127 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 348 RAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSP 407
GR+ +AL L ++M +P+ VTY V+ L +S A A F KM+ + S
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL-ALDLFRKMEERNIKASV 245
Query: 408 FTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLE 467
YSI+ID CK + A L EME KG Y SLI G +++ ++ E
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305
Query: 468 LKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
+ ++ +I F K G+L +A +L+NEM PD TYN+L+ G +
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
+ +A + M GC PDI +++I++N K+ M +F ++ + P+ ++YNT
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
++ ++G A L ++M ++G +TY +L+ +
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 167/349 (47%), Gaps = 1/349 (0%)
Query: 281 EVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLIN 340
+V A+ L + M T + L + R + + G M G + D+ +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 341 NLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKA 400
+IN R +L A + + L +P+ +T++T++ F + SEA A ++M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG-FCLEGRVSEAVALVDRMVE 168
Query: 401 NGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEA 460
P T S LI+G C RV +A +L++ M E GF P Y ++N K+
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 461 ANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMS 520
A +LF +++E +S Y+++I K G DA+ LFNEM+ K DV TY++L+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 521 GMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKP 580
G+ G DD +LR M +PD+ + + +++ K G A E++ +M I P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 581 DAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
D ++YN+++ + EA ++ M +KG E D +TYS ++ + K
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 122/278 (43%), Gaps = 15/278 (5%)
Query: 119 RNFEHNSTTYMALI------RCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGK 172
R ++ TY +LI CL E + MV C S ++N K
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQM------FDLMVSKGCEPDIVTYSILINSYCK 397
Query: 173 AKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTV 232
AK V+ + +F +I S+ P TYN+++L Q G EL+ EM + G P V
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG-VPPSVV 456
Query: 233 TYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEM 292
TY L+ G A+ +F++M+++ + IY ++ +V+ A L +
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 516
Query: 293 KGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINV-LGRAGR 351
KG V TY +I GL + G + +A LF M ++GC PD N LI LG +G
Sbjct: 517 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG- 575
Query: 352 LEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPAS 389
L +++L +M+ + T VI L + + S
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKS 613
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 251/512 (49%), Gaps = 4/512 (0%)
Query: 123 HNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSI 182
HN TY LI C + + + M++ L+ ++N ++ A+S+
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 183 FYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFG 242
Q+ +P + T+N++I L + + L + M +G C PD VTY +++
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLC 232
Query: 243 KLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVY 302
K G A+ L +M++ ++P IY T++ V AL L EM KG V
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 303 TYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKM 362
TY LI+ L GR DA L +M++ P++V + LI+ + G+L +A KL+++M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 363 EALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNR 422
P++ TY+++I F EA FE M + P+ TY+ LI GFCK R
Sbjct: 353 IKRSIDPDIFTYSSLING-FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 423 VEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAV 482
V++ L EM ++G Y +LI+G+ +A+ + A +F ++ Y++
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 483 MIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDG 542
++ G++ A+ +F +++ + +PD+YTYN ++ GM +AG ++D + L + G
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 543 CVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAA 602
P++ ++ +++G + G + A +F +M+ PD+ +YNT++ R G +A
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 603 RLMKDMNAKGFEYDQITYSSILEAV--GKVDE 632
L+++M + F D T + + G++D+
Sbjct: 592 ELIREMRSCRFVGDASTIGLVTNMLHDGRLDK 623
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 199/407 (48%), Gaps = 4/407 (0%)
Query: 228 FPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALG 287
FP V +S L+SA K+ + I L ++M+ G+ Y+ L++ + + ++ AL
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALA 137
Query: 288 LVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLG 347
++ +M G + T L+ G R+ DA L M++ G +PD N LI+ L
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 348 RAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSP 407
R R +A+ L ++M C+P++VTY V+ L + + A + +KM+ + P
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK-RGDIDLALSLLKKMEQGKIEPGV 256
Query: 408 FTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLE 467
Y+ +ID C V A L EM+ KG P Y SLI R+ A+ L +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 468 LKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
+ E + ++ +I F K G+L +A L++EM K PD++TY++L++G
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
+D+A + M C P++ ++N ++ G K+ ME+F +M + + V+Y T
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV---GKVD 631
++ +A + A + K M + G D +TYS +L+ + GKV+
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 196/389 (50%), Gaps = 1/389 (0%)
Query: 250 AIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIK 309
A+ LF +M ++ P+ ++ L+S K+ + + + L ++M+ G + +YTY+ LI
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 310 GLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKP 369
R ++ A + M+K G +PDIV +N+L+N R+ DA+ L +M + +P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 370 NVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLL 429
+ T+NT+I LF ASEA A ++M G P TY I+++G CK ++ A L
Sbjct: 185 DSFTFNTLIHGLFRHNR-ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 430 LEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGK 489
L++ME+ P Y ++I+ K A LF E+ + Y +I+
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 490 CGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINS 549
GR SDA L ++M + + P+V T++AL+ V+ G + +A L M + PDI +
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 550 HNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMN 609
++ ++NG A +F M + P+ V+YNT++ +A +E L ++M+
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 610 AKGFEYDQITYSSILEAVGKVDEDRNPTL 638
+G + +TY++++ + E N +
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 159/314 (50%), Gaps = 36/314 (11%)
Query: 316 RVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYN 375
+++DA LF +M+K P IV + L++ + + + + + L +M+ L N+ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 376 TVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEE 435
+I + F ++ S A A KM G P T + L++GFC NR+ A L+ +M E
Sbjct: 121 ILI-NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 436 KGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSD 495
G+ P + +LI+G + +H R S+
Sbjct: 180 MGYQPDSFTFNTLIHG-------------------------------LFRH----NRASE 204
Query: 496 AVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILN 555
AV L + M C+PD+ TY +++G+ + G ID A SLL++ME+ P + +N I++
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
Query: 556 GLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEY 615
L A+ +FT+M + I+P+ V+YN+++ CL G + +A+RL+ DM +
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 616 DQITYSSILEAVGK 629
+ +T+S++++A K
Sbjct: 325 NVVTFSALIDAFVK 338
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 1/273 (0%)
Query: 119 RNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNK 178
R N T+ ALI + + K +M++ + S ++N +++
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
A +F + S+ C P TYN++I + ++ EL+ EM G +TVTY+ LI
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG-LVGNTVTYTTLI 438
Query: 239 SAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCA 298
F + +A +F +M +G+ P Y+ L+ G+VE AL + + ++
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 299 LTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKL 358
+YTY +I+G+ +AG+VED + LF ++ +G KP++V +++ R G E+A L
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 359 FNKMEALQCKPNVVTYNTVIKSLFESKAPASEA 391
F +M+ P+ TYNT+I++ A+ A
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 13/278 (4%)
Query: 118 RRNFEHNSTTYMALIR--C----LDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILG 171
+R+ + + TY +LI C LDE + + + M+ C + ++
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHM------FELMISKDCFPNVVTYNTLIKGFC 407
Query: 172 KAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDT 231
KAK V++ + +F ++ R TY ++I Q + ++ +M ++G PD
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG-VLPDI 466
Query: 232 VTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQE 291
+TYS L+ G+ +A+ +F+ ++ + ++P Y ++ K G+VE L
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 292 MKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGR 351
+ KG V TYT ++ G R G E+A LF M +EG PD N LI R G
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 352 LEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPAS 389
+ +L +M + + + T V L + + S
Sbjct: 587 KAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKS 624
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/616 (25%), Positives = 283/616 (45%), Gaps = 93/616 (15%)
Query: 107 VKIQFFKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMV-------------- 152
+ +FFKW+ R F+H+ +Y + L RM +++MV
Sbjct: 124 LAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWS 183
Query: 153 -RSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIK-------SRKC------------- 191
R+ CV G V + ++L M+ +A+ F ++K +R C
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243
Query: 192 ---------------KPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
+PT TYN MI + +EG E L+ EM G PDTVTY++
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG-LVPDTVTYNS 302
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
+I FGK+GR + F+EMK+ +P Y L++ + K G++ L +EMKG G
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
V +Y+ L+ + G ++ A +++M + G P+ +LI+ + G L DA
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
+L N+M + + NVVTY +I L +++ EA F KM GV+P+ +Y+ LI G
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAER-MKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGC-S 475
F K +++A LL E++ +G P Y + I G ++ EAA + E+KE CG +
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE-CGIKA 540
Query: 476 SARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTY-------------------- 515
++ +Y ++ + K G ++ + L +EMK+L + V T+
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 516 ----------------NALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAK 559
A++ G+ + ++ A +L +M + G VPD ++ +++G K
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660
Query: 560 SGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQIT 619
G A+ + KM +K D ++Y +++ LS ++A +++M +G D++
Sbjct: 661 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 720
Query: 620 YSSILE---AVGKVDE 632
S+L+ +G +DE
Sbjct: 721 CISVLKKHYELGCIDE 736
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 183/374 (48%), Gaps = 4/374 (1%)
Query: 264 PTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGL 323
P ++ L S+ LG +E+A+ +MK + L+ + G+ +D
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 324 FMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFE 383
F +M+ G +P + N +I+ + + G +E A LF +M+ P+ VTYN++I F
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG-FG 308
Query: 384 SKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPA 443
+ +FE+MK P TY+ LI+ FCK ++ EM+ G P
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 444 AYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEM 503
+Y +L++ + K + A + +++++ + Y +I K G LSDA L NEM
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 504 KKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGP 563
++ + +V TY AL+ G+ A + +A L +M+ G +P++ S+N +++G K+
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 564 KRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSI 623
RA+E+ +++ IKPD + Y T + L E A +M +M G + + + Y+++
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 624 LEAVGKVDEDRNPT 637
++A K NPT
Sbjct: 549 MDAYFK---SGNPT 559
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 94/197 (47%)
Query: 162 VLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEM 221
+ + +++ K+ + L + ++K + T T+ +I L + K + +N +
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Query: 222 CNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGE 281
N+ + ++A+I K + +A LF++M + GL P YT+L+ FK G
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Query: 282 VEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINN 341
V +AL L +M G L + YT L+ GL +++ A M+ EG PD VL +
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 723
Query: 342 LINVLGRAGRLEDALKL 358
++ G +++A++L
Sbjct: 724 VLKKHYELGCIDEAVEL 740
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 156/600 (26%), Positives = 269/600 (44%), Gaps = 75/600 (12%)
Query: 111 FFKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNIL 170
F A R + H++ Y ++R L ETRM+ + + ++ + C V ++
Sbjct: 29 LFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTY 88
Query: 171 GKAKMVNKALSIFYQIK------------------------------------SRKCKPT 194
GK M ++AL +F +++ + P
Sbjct: 89 GKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPN 148
Query: 195 ANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLF 254
TYN +I M ++ +EK + M EG PD +YS +I+ K G+ A+ LF
Sbjct: 149 LQTYNVLIKMSCKKKEFEKARGFLDWMWKEG-FKPDVFSYSTVINDLAKAGKLDDALELF 207
Query: 255 DEMKENGLQPTAKIYTTLV-----------------------SIY-------------FK 278
DEM E G+ P Y L+ S+Y K
Sbjct: 208 DEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSK 267
Query: 279 LGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVL 338
G V+ L + + MK +YTY+ LI GL AG V+ A +F + + D+V
Sbjct: 268 CGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVT 327
Query: 339 INNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKM 398
N ++ R G+++++L+L+ ME + N+V+YN +IK L E+ EA+ + M
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEH-KNSVNIVSYNILIKGLLEN-GKIDEATMIWRLM 385
Query: 399 KANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRY 458
A G TY I I G C V KA +++E+E G AY S+I+ K KR
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 445
Query: 459 EAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNAL 518
E A+ L E+ ++ ++ V +I + RL +A EM K C+P V +YN L
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 519 MSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEI 578
+ G+ +AG +A + ++ M E+G PD+ +++I+L GL + A+E++ + S +
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Query: 579 KPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDEDRNPTL 638
+ D + +N ++ L G ++A +M +M + + +TY++++E KV + T+
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATV 625
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 208/433 (48%), Gaps = 7/433 (1%)
Query: 160 PSVLSEIVNILGKAK--MVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHEL 217
P+V + + I G +K V+ L I+ ++K + + TY+S+I L G +K +
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 218 YNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMK-ENGLQPTAKIYTTLVSIY 276
+NE+ +E D VTY+ ++ F + G+ ++ L+ M+ +N + + Y L+
Sbjct: 313 FNEL-DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVS--YNILIKGL 369
Query: 277 FKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDI 336
+ G++++A + + M KG A TY I GL G V A G+ + G D+
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 337 VLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFE 396
++I+ L + RLE+A L +M + N N +I L + EAS +
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD-SRLGEASFFLR 488
Query: 397 KMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAK 456
+M NG P+ +Y+ILI G CK + +A ++EM E G+ P Y L+ G + +
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 457 RYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYN 516
+ + A EL+ + + + ++ ++I G+L DA+ + M+ C ++ TYN
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608
Query: 517 ALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHS 576
LM G + G + A + M + G PDI S+N I+ GL G AME F ++
Sbjct: 609 TLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNH 668
Query: 577 EIKPDAVSYNTIL 589
I P ++N ++
Sbjct: 669 GIFPTVYTWNILV 681
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 155/319 (48%), Gaps = 7/319 (2%)
Query: 320 AYGLFMNMLKE-GCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVI 378
A+ LF + + G V+ ++++ L + ++ + + +CK + +VI
Sbjct: 26 AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVI 85
Query: 379 KSLFESKAPASEASAWFEKMKA-NGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKG 437
K+ ++ P +A F++M+ G P+ +Y+ L++ F + + K L E G
Sbjct: 86 KTYGKNSMP-DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG 144
Query: 438 FPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAV 497
P Y LI K K +E A + + Y+ +I K G+L DA+
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDAL 204
Query: 498 DLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCV-PDINSHNIILNG 556
+LF+EM + PDV YN L+ G ++ A L R+ ED V P++ +HNI+++G
Sbjct: 205 ELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISG 264
Query: 557 LAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYD 616
L+K G ++I+ +M+ +E + D +Y++++ L AG ++A + +++ + D
Sbjct: 265 LSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASID 324
Query: 617 QITYSSILEAV---GKVDE 632
+TY+++L GK+ E
Sbjct: 325 VVTYNTMLGGFCRCGKIKE 343
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 237/470 (50%), Gaps = 4/470 (0%)
Query: 160 PSVL--SEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHEL 217
PS+ +++++ + K K + +S+ +++ TYN +I + L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 218 YNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYF 277
+M G P VT S+L++ + R A+ L D+M E G +P +TTL+ F
Sbjct: 68 LGKMMKLGY-EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 278 KLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIV 337
+ +A+ LV M +GC + TY ++ GL + G ++ A+ L M + D+V
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 338 LINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEK 397
+ N +I+ L + ++DAL LF +ME +PNVVTY+++I L S S+AS
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC-SYGRWSDASQLLSD 245
Query: 398 MKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKR 457
M + P+ T++ LID F K + +A L ++M ++ P Y SLING+ R
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 458 YEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNA 517
+ A ++F + Y +IK F K R+ D +LF EM D TY
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 518 LMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSE 577
L+ G+ G D+A + ++M DG PDI +++I+L+GL +G ++A+E+F MQ SE
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 578 IKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
IK D Y T++ + +AG ++ L ++ KG + + +TY++++ +
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 234/503 (46%), Gaps = 2/503 (0%)
Query: 117 RRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMV 176
+R HN TY LI C I + + M++ LS ++N K +
Sbjct: 37 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 96
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
+ A+++ Q+ +P T+ ++I L + L + M G C P+ VTY
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGV 155
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
+++ K G A L ++M+ ++ I+ T++ K V+ AL L +EM+ KG
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
V TY+ LI L GR DA L +M+++ P++V N LI+ + G+ +A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
KL + M P++ TYN++I F +A FE M + P TY+ LI G
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLING-FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSS 476
FCK+ RVE L EM +G Y +LI G + A ++F ++
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 477 ARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
Y++++ G+L A+++F+ M+K K D+Y Y ++ GM +AG +DD + L
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 537 RMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAG 596
+ G P++ ++N +++GL + A + KM+ PD+ +YNT++ R G
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Query: 597 MFEEAARLMKDMNAKGFEYDQIT 619
+A L+++M + F D T
Sbjct: 515 DKAASAELIREMRSCRFVGDAST 537
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 221/461 (47%), Gaps = 2/461 (0%)
Query: 166 IVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG 225
++N + ++ AL++ ++ +P+ T +S++ L ++M G
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110
Query: 226 NCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKA 285
PDT+T++ LI + A+ L D M + G QP Y +V+ K G+++ A
Sbjct: 111 Y-RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 286 LGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINV 345
L+ +M+ V + +I L + V+DA LF M +G +P++V ++LI+
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 346 LGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLP 405
L GR DA +L + M + PN+VT+N +I + F + EA + M + P
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA-FVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 406 SPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELF 465
FTY+ LI+GFC +R++KA + E M K P Y +LI G+ K+KR E ELF
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 466 LELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRA 525
E+ Y +I+ G +A +F +M PD+ TY+ L+ G+
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 526 GMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSY 585
G ++ A + M++ DI + ++ G+ K+G ++F + +KP+ V+Y
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 586 NTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
NT++ L + +EA L+K M G D TY++++ A
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 150/303 (49%), Gaps = 36/303 (11%)
Query: 327 MLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKA 386
M+K P I N L++ + + + + + L KM+ L N+ TYN +I + F ++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI-NCFCRRS 59
Query: 387 PASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYC 446
S A A KM G PS T S L++G+C R+ A L+++M E G+ P +
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 447 SLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKL 506
+LI+G LFL + S+AV L + M +
Sbjct: 120 TLIHG------------LFLH-----------------------NKASEAVALVDRMVQR 144
Query: 507 RCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRA 566
C+P++ TY +++G+ + G ID A++LL +ME D+ N I++ L K A
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 567 MEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
+ +F +M+ I+P+ V+Y++++ CL G + +A++L+ DM K + +T++++++A
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 627 VGK 629
K
Sbjct: 265 FVK 267
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 1/272 (0%)
Query: 118 RRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVN 177
+R+ + + TY +LI + + + MV C + ++ K+K V
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 178 KALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSAL 237
+F ++ R TY ++I L +G + +++ +M ++G PD +TYS L
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSIL 401
Query: 238 ISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGC 297
+ G+ A+ +FD M+++ ++ IYTT++ K G+V+ L + KG
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 298 ALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALK 357
V TY +I GL +++AY L M ++G PD N LI R G + +
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 358 LFNKMEALQCKPNVVTYNTVIKSLFESKAPAS 389
L +M + + + T V L + + S
Sbjct: 522 LIREMRSCRFVGDASTIGLVANMLHDGRLDKS 553
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 160/608 (26%), Positives = 275/608 (45%), Gaps = 80/608 (13%)
Query: 95 VHQVLNIDVEINVKIQFFKWAGRRRNFEHNSTTYMALI-------------RCLDETRMI 141
++++L + + ++ ++ F W G + + H+ Y LI R L + +
Sbjct: 81 LYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDE 140
Query: 142 GVMWKS------IQDM---------------VRSTCVMGPSVLSE--IVNILGKAKMVNK 178
G+++K ++D +R+ P+ S ++ IL
Sbjct: 141 GIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKV 200
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
A ++FY + SRK PT T+ ++ + L +M G C P++V Y LI
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG-CVPNSVIYQTLI 259
Query: 239 SAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCA 298
+ K R A++L +EM G P A+ + ++ K + +A +V M +G A
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 299 LTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKL 358
TY L+ GL + GRV+ A LF + KP+IV+ N LI+ GRL+DA +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 359 FNKM-EALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGF 417
+ M + P+V TYN++I ++ + A M+ G P+ ++Y+IL+DGF
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWK-EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 418 CKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGC--- 474
CK ++++A+ +L EM G P + LI+ + K R A E+F E+ GC
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK-GCKPD 493
Query: 475 ---------------------------------SSARVYAVMIKHFGKCGRLSDAVDLFN 501
++ Y +I F + G + +A L N
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 502 EMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSG 561
EM D TYN+L+ G+ RAG +D A SL +M DG P S NI++NGL +SG
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 562 GPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYS 621
+ A+E +M PD V++N+++ L RAG E+ + + + A+G D +T++
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 622 SILEAVGK 629
+++ + K
Sbjct: 674 TLMSWLCK 681
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 238/481 (49%), Gaps = 7/481 (1%)
Query: 148 IQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQ 207
++DM + CV + +++ L K VN+AL + ++ C P A T+N +IL L +
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 208 EGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAK 267
+ ++ N M G PD +TY L++ K+GR +A LF + +P
Sbjct: 300 FDRINEAAKMVNRMLIRGFA-PDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIV 354
Query: 268 IYTTLVSIYFKLGEVEKALGLVQEM-KGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMN 326
I+ TL+ + G ++ A ++ +M G V TY LI G + G V A + +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 327 MLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKA 386
M +GCKP++ L++ + G++++A + N+M A KPN V +N +I S F +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI-SAFCKEH 473
Query: 387 PASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYC 446
EA F +M G P +T++ LI G C+ + ++ A LL +M +G Y
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 447 SLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKL 506
+LIN + + + A +L E+ Y +IK + G + A LF +M +
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 507 RCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRA 566
P + N L++G+ R+GM+++A + M G PDI + N ++NGL ++G +
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 567 MEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
+ +F K+Q I PD V++NT++ L + G +A L+ + GF + T+S +L++
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Query: 627 V 627
+
Sbjct: 714 I 714
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Query: 124 NSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIF 183
N+ TY LI I K + +MV + + ++ L +A V+KA S+F
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 184 YQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGK 243
++ P+ + N +I L + G E+ E EM G+ PD VT+++LI+ +
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST-PDIVTFNSLINGLCR 646
Query: 244 LGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYT 303
GR + +F +++ G+ P + TL+S K G V A L+ E G T
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Query: 304 YTELIKGL 311
++ L++ +
Sbjct: 707 WSILLQSI 714
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 232/462 (50%), Gaps = 2/462 (0%)
Query: 163 LSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMC 222
LS ++N K +++A+++ Q+ + +P T+N++I L + L + M
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 212
Query: 223 NEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEV 282
G C PD TY +++ K G A+ L +M++ ++ IYTT++ V
Sbjct: 213 ARG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 283 EKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNL 342
AL L EM KG V TY LI+ L GR DA L +M++ P++V + L
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 343 INVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANG 402
I+ + G+L +A KL+++M P++ TY+++I F EA FE M +
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING-FCMHDRLDEAKHMFELMISKD 390
Query: 403 VLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAAN 462
P+ TY+ LI GFCK RVE+ L EM ++G Y +LI G +A + A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 463 ELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGM 522
++F ++ Y++++ K G+L A+ +F ++K + +PD+YTYN ++ GM
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 523 VRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDA 582
+AG ++D + L + G P++ + +++G + G + A +F +M+ P++
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 583 VSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSIL 624
+YNT++ R G +A L+K+M + GF D T S ++
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 205/398 (51%), Gaps = 1/398 (0%)
Query: 229 PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGL 288
P+TVT++ LI + A+ L D M G QP Y T+V+ K G+++ AL L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 289 VQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGR 348
+++M+ V YT +I L V DA LF M +G +P++V N+LI L
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPF 408
GR DA +L + M + PNVVT++ +I + F + EA +++M + P F
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDA-FVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 409 TYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL 468
TYS LI+GFC +R+++A + E M K P Y +LI G+ KAKR E ELF E+
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 469 KEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMI 528
+ + Y +I+ + G A +F +M PD+ TY+ L+ G+ + G +
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 529 DDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTI 588
+ A + +++ PDI ++NI++ G+ K+G + ++F + +KP+ + Y T+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 589 LGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
+ R G+ EEA L ++M G + TY++++ A
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 217/451 (48%), Gaps = 2/451 (0%)
Query: 121 FEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKAL 180
++ N+ T+ LI L I MV C +VN L K ++ AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 181 SIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISA 240
S+ +++ K + Y ++I L L+ EM N+G P+ VTY++LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG-IRPNVVTYNSLIRC 299
Query: 241 FGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALT 300
GR A RL +M E + P ++ L+ + K G++ +A L EM +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 301 VYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFN 360
++TY+ LI G R+++A +F M+ + C P++V N LI +A R+E+ ++LF
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 361 KMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKT 420
+M N VTYNT+I+ LF++ A F+KM ++GV P TYSIL+DG CK
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQA-GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 421 NRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVY 480
++EKA ++ E +++ P Y +I G KA + E +LF L + +Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 481 AVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEE 540
MI F + G +A LF EMK+ P+ TYN L+ +R G + L++ M
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 541 DGCVPDINSHNIILNGLAKSGGPKRAMEIFT 571
G V D ++ ++++N L K +E+ +
Sbjct: 599 CGFVGDASTISMVINMLHDGRLEKSYLEMLS 629
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 203/415 (48%), Gaps = 36/415 (8%)
Query: 250 AIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIK 309
A+ LF EM ++ P+ + L+S K+ + + + L + M+ + +Y+Y LI
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 310 GLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKP 369
R ++ A + M+K G +PDIV +++L+N R+ +A+ L ++M ++ +P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 370 NVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLL 429
N VT+NT+I LF ASEA A ++M A G P FTY +++G CK ++ A L
Sbjct: 184 NTVTFNTLIHGLFLHN-KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 430 LE-----------------------------------EMEEKGFPPCPAAYCSLINGYGK 454
L+ EM+ KG P Y SLI
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 455 AKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYT 514
R+ A+ L ++ E + ++ +I F K G+L +A L++EM K PD++T
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 515 YNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQ 574
Y++L++G +D+A + M C P++ ++N ++ G K+ + ME+F +M
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 575 HSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
+ + V+YNT++ L +AG + A ++ K M + G D ITYS +L+ + K
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 193/407 (47%), Gaps = 39/407 (9%)
Query: 229 PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGL 288
PD VT S+L++ + R A+ L D+M QP + TL+ F + +A+ L
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 207
Query: 289 VQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGR 348
+ M +GC ++TY ++ GL + G ++ A L M K + D+V+ +I+ L
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPF 408
+ DAL LF +M+ +PNVVTYN++I+ L + S+AS M + P+
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-NYGRWSDASRLLSDMIERKINPNVV 326
Query: 409 TYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL 468
T+S LID F K ++ +A L +EM ++ P Y SLING
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING----------------- 369
Query: 469 KEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMI 528
F RL +A +F M C P+V TYN L+ G +A +
Sbjct: 370 ------------------FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 529 DDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTI 588
++ L R M + G V + ++N ++ GL ++G A +IF KM + PD ++Y+ +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 589 LGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV---GKVDE 632
L L + G E+A + + + E D TY+ ++E + GKV++
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 13/278 (4%)
Query: 118 RRNFEHNSTTYMALIR--C----LDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILG 171
+R+ + + TY +LI C LDE + + + M+ C + ++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHM------FELMISKDCFPNVVTYNTLIKGFC 406
Query: 172 KAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDT 231
KAK V + + +F ++ R TYN++I L Q G + +++ +M ++G PD
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VPPDI 465
Query: 232 VTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQE 291
+TYS L+ K G+ A+ +F+ ++++ ++P Y ++ K G+VE L
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 292 MKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGR 351
+ KG V YT +I G R G E+A LF M ++G P+ N LI R G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 352 LEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPAS 389
+ +L +M + + T + VI L + + S
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 236/468 (50%), Gaps = 4/468 (0%)
Query: 166 IVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG 225
+++ L K K + A S+ ++ S +TY+ +I L++ + L +EM + G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342
Query: 226 -NCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEK 284
N P Y I K G A LFD M +GL P A+ Y +L+ Y + V +
Sbjct: 343 INIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 285 ALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLIN 344
L+ EMK + ++ YTY ++KG+ +G ++ AY + M+ GC+P++V+ LI
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 345 VLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVL 404
+ R DA+++ +M+ P++ YN++I L ++K EA ++ +M NG+
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR-MDEARSFLVEMVENGLK 519
Query: 405 PSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANEL 464
P+ FTY I G+ + + A ++EM E G P LIN Y K + A
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 465 FLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVR 524
+ + + A+ Y V++ K ++ DA ++F EM+ PDV++Y L++G +
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 525 AGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVS 584
G + A S+ M E+G P++ +N++L G +SG ++A E+ +M + P+AV+
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 585 YNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDE 632
Y TI+ ++G EA RL +M KG D Y+++++ ++++
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 246/531 (46%), Gaps = 24/531 (4%)
Query: 117 RRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMV 176
++RN + TY +++ + + + + +++M+ S C + + ++ +
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
A+ + ++K + P YNS+I+ L + ++ EM G P+ TY A
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG-LKPNAFTYGA 527
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
IS + + SA + EM+E G+ P + T L++ Y K G+V +A + M +G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
TYT L+ GL + +V+DA +F M +G PD+ LIN + G ++ A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
+F++M PNV+ YN ++ S +A ++M G+ P+ TY +IDG
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRS-GEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSS 476
+CK+ + +A L +EM+ KG P Y +L++G + E A +F K+ C S+
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASST 766
Query: 477 ARVYAVM--IKHFGKC-------GRLSD-AVDLFNEMKKLRCKPDVYTYNALMSGMVRAG 526
A A++ + FGK RL D + D F KP+ TYN ++ + + G
Sbjct: 767 APFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-------KPNDVTYNIMIDYLCKEG 819
Query: 527 MIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYN 586
++ A L +M+ +P + ++ +LNG K G +F + + I+PD + Y+
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 587 TILGCLSRAGMFEEAARLMKDMNAK-----GFEYDQITYSSILEAVGKVDE 632
I+ + GM +A L+ M AK G + T ++L KV E
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 234/505 (46%), Gaps = 47/505 (9%)
Query: 124 NSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIF 183
N Y LI+ + G + +++M + ++ L KAK +++A S
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 184 YQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGK 243
++ KP A TY + I ++ + + EM E P+ V + LI+ + K
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM-RECGVLPNKVLCTGLINEYCK 569
Query: 244 LGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYT 303
G+ I A + M + G+ AK YT L++ FK +V+ A + +EM+GKG A V++
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKME 363
Y LI G + G ++ A +F M++EG P++++ N L+ R+G +E A +L ++M
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 364 ALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRV 423
PN VTY T+I +S +EA F++MK G++P F Y+ L+DG C+ N V
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKS-GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 424 EKAHLLLEEMEEKGFPPCPAAYCSLING---YGKAK-RYEAANELFLELKEYCGCSSARV 479
E+A + + +KG A + +LIN +GK + + E N L + G +
Sbjct: 749 ERA-ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 480 YAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSG------------------ 521
Y +MI + K G L A +LF++M+ P V TY +L++G
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 522 -----------------MVRAGMIDDAYSLLRRM-----EEDGCVPDINSHNIILNGLAK 559
++ GM A L+ +M +DGC I++ +L+G AK
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 560 SGGPKRAMEIFTKMQHSEIKPDAVS 584
G + A ++ M + PD+ +
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/545 (24%), Positives = 235/545 (43%), Gaps = 40/545 (7%)
Query: 124 NSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIF 183
++ TY LI L + R + +MV + P + + ++ K ++ KA ++F
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 184 YQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGK 243
+ + P A Y S+I +E + +EL EM + N TY ++
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM-KKRNIVISPYTYGTVVKGMCS 429
Query: 244 LGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYT 303
G A + EM +G +P IYTTL+ + + A+ +++EMK +G A ++
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKME 363
Y LI GL +A R+++A + M++ G KP+ I+ A A K +M
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 364 ALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRV 423
PN V +I + K EA + + M G+L TY++L++G K ++V
Sbjct: 550 ECGVLPNKVLCTGLINE-YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 424 EKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVM 483
+ A + EM KG P +Y LING+ K + A+ +F E+ E + +Y ++
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 484 IKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGC 543
+ F + G + A +L +EM P+ TY ++ G ++G + +A+ L M+ G
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 544 VPDINSHNIILNGLAKSGGPKRAMEIFT---------------------KMQHSEI---- 578
VPD + +++G + +RA+ IF K +E+
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 579 -------------KPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILE 625
KP+ V+YN ++ L + G E A L M ITY+S+L
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 626 AVGKV 630
K+
Sbjct: 849 GYDKM 853
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 185/453 (40%), Gaps = 75/453 (16%)
Query: 230 DTVTYSAL-ISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGL 288
D+ ++ AL + FG + +S + E P A++++++V
Sbjct: 98 DSFSFLALDLCNFGSFEKALSVVERMIERN----WPVAEVWSSIVRCS------------ 141
Query: 289 VQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGR 348
QE GK ++ L G G +E+A +F + + P + L++ L R
Sbjct: 142 -QEFVGKSDDGVLFGI--LFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLR 198
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKS-------------LFESKAPASEASAWF 395
RL+ ++ M +V TY+ +I + LF+++ A+
Sbjct: 199 WNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNV 258
Query: 396 -------EKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSL 448
E M G++P +TY +LIDG CK R+E A LL EM+ G Y L
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLL 318
Query: 449 INGYGKAKRYEAANELFLELKEY-----------CGC----------------------- 474
I+G K + +AA L E+ + C C
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378
Query: 475 -SSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYS 533
A+ YA +I+ + + + +L EMKK YTY ++ GM +G +D AY+
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 534 LLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLS 593
+++ M GC P++ + ++ ++ AM + +M+ I PD YN+++ LS
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 594 RAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
+A +EA + +M G + + TY + +
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Query: 189 RKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDI 248
R KP TYN MI L +EG E EL+++M N N P +TY++L++ + K+GR
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN-ANLMPTVITYTSLLNGYDKMGRRA 857
Query: 249 SAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGK-----GCALTVYT 303
+FDE G++P +Y+ +++ + K G KAL LV +M K GC L++ T
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIST 917
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLIN 344
L+ G + G +E A + NM++ PD + LIN
Sbjct: 918 CRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 237/470 (50%), Gaps = 7/470 (1%)
Query: 166 IVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG 225
I+N +++ +N ++S F ++ P +N +N ++ ++ + + +NE N+
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE--NKS 157
Query: 226 NCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKA 285
D ++ LI + G + L E+ E G P IYTTL+ K GE+EKA
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 286 LGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINV 345
L EM G TYT LI GL + G + + ++ M ++G P++ N ++N
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 346 LGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLP 405
L + GR +DA ++F++M N+VTYNT+I L + +EA+ ++MK++G+ P
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR-EMKLNEANKVVDQMKSDGINP 336
Query: 406 SPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELF 465
+ TY+ LIDGFC ++ KA L +++ +G P Y L++G+ + A ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 466 LELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRA 525
E++E S Y ++I F + + A+ L M++L PDV+TY+ L+ G
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 526 GMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSY 585
G +++A L + M E C P+ +N ++ G K G RA+++ +M+ E+ P+ SY
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Query: 586 NTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDEDRN 635
++ L + +EA RL++ M G + +SIL + + D +
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKMIDSGID----PSTSILSLISRAKNDSH 562
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 88/216 (40%), Gaps = 69/216 (31%)
Query: 478 RVYAVMIKHFGKCGRLSDAVDLFNEM---------------------------------- 503
R+Y V+I + + L+ ++ FNEM
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 504 KKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEE--------------DGC------ 543
K + DVY++ L+ G AG I+ ++ LL + E DGC
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 544 ---------------VPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTI 588
V + ++ +++NGL K+G K+ E++ KMQ + P+ +YN +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 589 LGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSIL 624
+ L + G ++A ++ +M +G + +TY++++
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 209 bits (531), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 147/491 (29%), Positives = 247/491 (50%), Gaps = 9/491 (1%)
Query: 121 FEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSV--LSEIVNILGKAKMVNK 178
F + TY +L+ L + R I + +++M T + P+V + + +LG+A +N+
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM--ETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
A I ++ C P TY +I L + E++ +M G PD VTY L+
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLL 335
Query: 239 SAFGKLGRDISAIRLF-DEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGC 297
F RD+ +++ F EM+++G P +T LV K G +A + M+ +G
Sbjct: 336 DRFSD-NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 298 ALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALK 357
++TY LI GL R R++DA LF NM G KP I+ G++G AL+
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 358 LFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGF 417
F KM+ PN+V N + SL ++ EA F +K G++P TY++++ +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKA-GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 418 CKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSA 477
K +++A LL EM E G P SLIN KA R + A ++F+ +KE +
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 478 RVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRR 537
Y ++ GK G++ +A++LF M + C P+ T+N L + + + A +L +
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 538 MEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGM 597
M + GCVPD+ ++N I+ GL K+G K AM F +M+ + PD V+ T+L + +A +
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASL 692
Query: 598 FEEAARLMKDM 608
E+A +++ +
Sbjct: 693 IEDAYKIITNF 703
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 239/486 (49%), Gaps = 37/486 (7%)
Query: 182 IFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAF 241
+F ++ R K NTY ++ L +G ++ +M G + +Y+ LI
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVL-NAYSYNGLIHLL 198
Query: 242 GKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTV 301
K A+ ++ M G +P+ + Y++L+ K +++ +GL++EM+ G V
Sbjct: 199 LKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNV 258
Query: 302 YTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNK 361
YT+T I+ LGRAG++ +AY + M EGC PD+V LI+ L A +L+ A ++F K
Sbjct: 259 YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK 318
Query: 362 MEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTN 421
M+ + KP+ VTY T++ +++ S W E M+ +G +P T++IL+D CK
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE-MEKDGHVPDVVTFTILVDALCKAG 377
Query: 422 RVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYA 481
+A L+ M ++G P Y +LI G + R + A ELF ++ +A Y
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 482 VMIKHFGKCGRLSDAVDLFNEMKK-------LRCK------------------------- 509
V I ++GK G A++ F +MK + C
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 510 ---PDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRA 566
PD TYN +M + G ID+A LL M E+GC PD+ N ++N L K+ A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 567 MEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
++F +M+ ++KP V+YNT+L L + G +EA L + M KG + IT++++ +
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 627 VGKVDE 632
+ K DE
Sbjct: 618 LCKNDE 623
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 224/466 (48%), Gaps = 39/466 (8%)
Query: 195 ANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDI-SAIRL 253
A +YN +I +L++ + + E+Y M EG P TYS+L+ GK RDI S + L
Sbjct: 188 AYSYNGLIHLLLKSRFCTEAMEVYRRMILEG-FRPSLQTYSSLMVGLGKR-RDIDSVMGL 245
Query: 254 FDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGR 313
EM+ GL+P +T + + + G++ +A +++ M +GC V TYT LI L
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305
Query: 314 AGRVEDAYGLF-----------------------------------MNMLKEGCKPDIVL 338
A +++ A +F M K+G PD+V
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 339 INNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKM 398
L++ L +AG +A + M PN+ TYNT+I L +A F M
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR-LDDALELFGNM 424
Query: 399 KANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRY 458
++ GV P+ +TY + ID + K+ A E+M+ KG P A + + KA R
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 459 EAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNAL 518
A ++F LK+ + Y +M+K + K G + +A+ L +EM + C+PDV N+L
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 519 MSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEI 578
++ + +A +D+A+ + RM+E P + ++N +L GL K+G + A+E+F M
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 579 KPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSIL 624
P+ +++NT+ CL + A +++ M G D TY++I+
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/545 (26%), Positives = 244/545 (44%), Gaps = 77/545 (14%)
Query: 124 NSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIF 183
+S TY +++C + I K + +M+ + C V++ ++N L KA V++A +F
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 184 YQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGK 243
++K K KPT VTY+ L++ GK
Sbjct: 562 MRMKEMKLKPTV------------------------------------VTYNTLLAGLGK 585
Query: 244 LGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYT 303
G+ AI LF+ M + G P + TL K EV AL ++ +M GC V+T
Sbjct: 586 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 645
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLF-NKM 362
Y +I GL + G+V++A F M K+ PD V + L+ + +A +EDA K+ N +
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Query: 363 EALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGF-CKTN 421
+P + + +I S+ ++A A ++ E++ ANG+ + + I + CK N
Sbjct: 705 YNCADQPANLFWEDLIGSIL-AEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHN 763
Query: 422 RVEKAHLLLEEM-EEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVY 480
V A L E+ ++ G P Y LI G +A E A ++FL++K Y
Sbjct: 764 NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATY 823
Query: 481 AVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEE 540
++ +GK G++ + +L+ EM C+ + T+N ++SG+V+AG +DDA L +
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 541 D------------------------------------GCVPDINSHNIILNGLAKSGGPK 564
D GC P+ +NI++NG K+G
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 565 RAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSIL 624
A +F +M ++PD +Y+ ++ CL G +E K++ G D + Y+ I+
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 625 EAVGK 629
+GK
Sbjct: 1004 NGLGK 1008
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/536 (24%), Positives = 241/536 (44%), Gaps = 41/536 (7%)
Query: 127 TYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQI 186
TY L+ L + I + + MV+ C + + + L K V AL + +++
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 187 KSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGR 246
C P TYN++I L++ G ++ +++M + +PD VT L+ K
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM--KKLVYPDFVTLCTLLPGVVKASL 692
Query: 247 DISAIRLFDEMKEN-GLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGC-------- 297
A ++ N QP + L+ ++ A+ + + G
Sbjct: 693 IEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSIL 752
Query: 298 ---------------ALTVY--------------TYTELIKGLGRAGRVEDAYGLFMNML 328
A T++ TY LI GL A +E A +F+ +
Sbjct: 753 VPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK 812
Query: 329 KEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPA 388
GC PD+ N L++ G++G++++ +L+ +M +C+ N +T+N VI L ++
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Query: 389 SEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSL 448
+++ M P+ TY LIDG K+ R+ +A L E M + G P A Y L
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 449 INGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRC 508
ING+GKA +AA LF + + + Y+V++ GR+ + + F E+K+
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 509 KPDVYTYNALMSGMVRAGMIDDAYSLLRRMEED-GCVPDINSHNIILNGLAKSGGPKRAM 567
PDV YN +++G+ ++ +++A L M+ G PD+ ++N ++ L +G + A
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAG 1052
Query: 568 EIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSI 623
+I+ ++Q + ++P+ ++N ++ S +G E A + + M GF + TY +
Sbjct: 1053 KIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 168/331 (50%), Gaps = 7/331 (2%)
Query: 229 PDTVTYSALISAFGKLGRDISAI--RLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKAL 286
P TY+ LI G L D+ I +F ++K G P Y L+ Y K G++++
Sbjct: 783 PKLPTYNLLIG--GLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 287 GLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKE-GCKPDIVLINNLINV 345
L +EM C T+ +I GL +AG V+DA L+ +++ + P LI+
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 346 LGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLP 405
L ++GRL +A +LF M C+PN YN +I F A A A F++M GV P
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING-FGKAGEADAACALFKRMVKEGVRP 959
Query: 406 SPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELF 465
TYS+L+D C RV++ +E++E G P Y +ING GK+ R E A LF
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 466 LELKEYCGCS-SARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVR 524
E+K G + Y +I + G G + +A ++NE+++ +P+V+T+NAL+ G
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079
Query: 525 AGMIDDAYSLLRRMEEDGCVPDINSHNIILN 555
+G + AY++ + M G P+ ++ + N
Sbjct: 1080 SGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 2/227 (0%)
Query: 119 RNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNK 178
R+F + TY LI L ++ + + + M+ C ++ + ++N GKA +
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
A ++F ++ +P TY+ ++ L G ++ + E+ E PD V Y+ +I
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGLNPDVVCYNLII 1003
Query: 239 SAFGKLGRDISAIRLFDEMKEN-GLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGC 297
+ GK R A+ LF+EMK + G+ P Y +L+ G VE+A + E++ G
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Query: 298 ALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLIN 344
V+T+ LI+G +G+ E AY ++ M+ G P+ L N
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 237/470 (50%), Gaps = 4/470 (0%)
Query: 160 PSVL--SEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHEL 217
PS++ +++++ + K K + +S+ +++ + TYN +I + L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 218 YNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYF 277
+M G P VT S+L++ + R A+ L D+M E G +P +TTL+ F
Sbjct: 143 LGKMMKLGY-EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 278 KLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIV 337
+ +A+ LV M +GC + TY ++ GL + G + A L M + D+V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 338 LINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEK 397
+ N +I+ L + ++DAL LF +ME +PNVVTY+++I L S S+AS
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC-SYGRWSDASQLLSD 320
Query: 398 MKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKR 457
M + P+ T++ LID F K + +A L ++M ++ P Y SL+NG+ R
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 458 YEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNA 517
+ A ++F + Y +IK F K R+ D +LF EM D TY
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 518 LMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSE 577
L+ G+ G D+A + ++M DG PDI +++I+L+GL +G ++A+E+F MQ SE
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 578 IKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
IK D Y T++ + +AG ++ L ++ KG + + +TY++++ +
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 235/503 (46%), Gaps = 2/503 (0%)
Query: 117 RRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMV 176
+R H TY LI C I + + M++ LS ++N K +
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
+ A+++ Q+ +P T+ ++I L + L + M G C P+ VTY
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGV 230
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
+++ K G A+ L ++M+ ++ I+ T++ K V+ AL L +EM+ KG
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
V TY+ LI L GR DA L +M+++ P++V N LI+ + G+ +A
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
KL++ M P++ TYN+++ F +A FE M + P TY+ LI G
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNG-FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSS 476
FCK+ RVE L EM +G Y +LI G + A ++F ++
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 477 ARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
Y++++ G+L A+++F+ M+K K D+Y Y ++ GM +AG +DD + L
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 537 RMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAG 596
+ G P++ ++N +++GL + A + KM+ P++ +YNT++ R G
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Query: 597 MFEEAARLMKDMNAKGFEYDQIT 619
+A L+++M + F D T
Sbjct: 590 DKAASAELIREMRSCRFVGDAST 612
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 228/478 (47%), Gaps = 2/478 (0%)
Query: 149 QDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQE 208
+ M R V G + ++N + ++ AL++ ++ +P+ T +S++
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 209 GYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKI 268
L ++M G PDT+T++ LI + A+ L D M + G QP
Sbjct: 169 KRISDAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 269 YTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNML 328
Y +V+ K G+ + AL L+ +M+ V + +I L + V+DA LF M
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 329 KEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPA 388
+G +P++V ++LI+ L GR DA +L + M + PN+VT+N +I + F +
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA-FVKEGKF 346
Query: 389 SEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSL 448
EA ++ M + P FTY+ L++GFC +R++KA + E M K P Y +L
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 449 INGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRC 508
I G+ K+KR E ELF E+ Y +I+ G +A +F +M
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 509 KPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAME 568
PD+ TY+ L+ G+ G ++ A + M++ DI + ++ G+ K+G +
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 569 IFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
+F + +KP+ V+YNT++ L + +EA L+K M G + TY++++ A
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 199/403 (49%), Gaps = 4/403 (0%)
Query: 233 TYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEM 292
TY+ LI+ F + + A+ L +M + G +P+ ++L++ Y + A+ LV +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 293 KGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRL 352
G T+T LI GL + +A L M++ GC+P++V ++N L + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 353 EDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSI 412
+ AL L NKMEA + + +VV +NT+I SL + + +A F++M+ G+ P+ TYS
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH-VDDALNLFKEMETKGIRPNVVTYSS 300
Query: 413 LIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYC 472
LI C R A LL +M EK P + +LI+ + K ++ A +L+ ++ +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 473 GCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAY 532
Y ++ F RL A +F M C PDV TYN L+ G ++ ++D
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 533 SLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCL 592
L R M G V D ++ ++ GL G A ++F +M + PD ++Y+ +L L
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 593 SRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV---GKVDE 632
G E+A + M + D Y++++E + GKVD+
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 164/324 (50%), Gaps = 3/324 (0%)
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKME 363
Y E+++ +++DA GLF M+K P IV N L++ + + + + + L KM+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 364 ALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRV 423
L+ + TYN +I + F ++ S A A KM G PS T S L++G+C R+
Sbjct: 113 RLEIVHGLYTYNILI-NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 424 EKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARV-YAV 482
A L+++M E G+ P + +LI+G + A L + + GC V Y V
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGV 230
Query: 483 MIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDG 542
++ K G A++L N+M+ + + DV +N ++ + + +DDA +L + ME G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 543 CVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAA 602
P++ +++ +++ L G A ++ + M +I P+ V++N ++ + G F EA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 603 RLMKDMNAKGFEYDQITYSSILEA 626
+L DM + + D TY+S++
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNG 374
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 174/417 (41%), Gaps = 71/417 (17%)
Query: 281 EVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLIN 340
+++ A+GL M ++ + +L+ + + + + L M + + N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 341 NLINVLGRAGRLEDALKLFNKMEALQCKPNVVT--------------------------- 373
LIN R ++ AL L KM L +P++VT
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 374 --------YNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCK------ 419
+ T+I LF ASEA A ++M G P+ TY ++++G CK
Sbjct: 185 GYRPDTITFTTLIHGLFLHN-KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 420 ----TNRVEKAHL-------------------------LLEEMEEKGFPPCPAAYCSLIN 450
N++E A + L +EME KG P Y SLI+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 451 GYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKP 510
R+ A++L ++ E + + +I F K G+ +A L+++M K P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 511 DVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIF 570
D++TYN+L++G +D A + M C PD+ ++N ++ G KS + E+F
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 571 TKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
+M H + D V+Y T++ L G + A ++ K M + G D +TYS +L+ +
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 1/272 (0%)
Query: 118 RRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVN 177
+R+ + + TY +L+ + + + MV C + ++ K+K V
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 178 KALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSAL 237
+F ++ R TY ++I L +G + +++ +M ++G PD +TYS L
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSIL 476
Query: 238 ISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGC 297
+ G+ A+ +FD M+++ ++ IYTT++ K G+V+ L + KG
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 298 ALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALK 357
V TY +I GL +++AY L M ++G P+ N LI R G + +
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 358 LFNKMEALQCKPNVVTYNTVIKSLFESKAPAS 389
L +M + + + T V L + + S
Sbjct: 597 LIREMRSCRFVGDASTIGLVANMLHDGRLDKS 628
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 210/425 (49%), Gaps = 21/425 (4%)
Query: 205 LMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQP 264
L G YEK + EM +G PDT TYS +++ + A LF+EMK GL
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGF-IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 265 TAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLF 324
YT +V + K G +E+A EM+ GC V TYT LI +A +V A LF
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 325 MNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFES 384
ML EGC P+IV + LI+ +AG++E A ++F +M + P+V Y
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY---------- 626
Query: 385 KAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAA 444
F++ N P+ TY L+DGFCK++RVE+A LL+ M +G P
Sbjct: 627 ----------FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 445 YCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMK 504
Y +LI+G K + + A E+ E+ E+ ++ Y+ +I + K R A + ++M
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 505 KLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPK 564
+ C P+V Y ++ G+ + G D+AY L++ MEE GC P++ ++ +++G G +
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 565 RAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSIL 624
+E+ +M + P+ V+Y ++ + G + A L+++M + Y ++
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 625 EAVGK 629
E K
Sbjct: 857 EGFNK 861
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 159/595 (26%), Positives = 275/595 (46%), Gaps = 54/595 (9%)
Query: 75 WGPDAEKALEVLKMRVDHRLVHQVLNIDVEINVKIQFFKWAGRRRNFEHNSTTYMALIRC 134
+G ++K L + ++ LV +VL + + I FF WAGR+ ++H + Y AL+
Sbjct: 115 FGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDL 174
Query: 135 L---DETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQ----IK 187
+ D+ ++ + I+D + V E +N+L + N + SI + +K
Sbjct: 175 IVRDDDEKVPEEFLQQIRDDDK-------EVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227
Query: 188 SRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRD 247
+ +P+ +TYN +I ++ + ++ EM + N D T + K+G+
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM-SLANLRMDGFTLRCFAYSLCKVGKW 286
Query: 248 ISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTEL 307
A+ L ++ P YT L+S + E+A+ + M+ C V TY+ L
Sbjct: 287 REALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL 343
Query: 308 IKG------LGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNK 361
+ G LGR RV + M+ EGC P + N+L++ +G A KL K
Sbjct: 344 LCGCLNKKQLGRCKRVLNM------MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKK 397
Query: 362 MEALQCKPNVVTYNTVIKSLFESKAPAS-----EASAWFEKMKANGVLPSPFTYSILIDG 416
M P V YN +I S+ K + A + +M A GV+ + S
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSS 476
C + EKA ++ EM +GF P + Y ++N A + E A LF E+K +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 477 ARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
Y +M+ F K G + A FNEM+++ C P+V TY AL+ ++A + A L
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 537 RMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPD--------------- 581
M +GC+P+I +++ +++G K+G ++A +IF +M S+ PD
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 582 -AVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA---VGKVDE 632
V+Y +L ++ EEA +L+ M+ +G E +QI Y ++++ VGK+DE
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 692
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 216/466 (46%), Gaps = 20/466 (4%)
Query: 127 TYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQI 186
TY ++ + +I K +M C + +++ KAK V+ A +F +
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 187 KSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMC---------------NEGNCFPDT 231
S C P TY+++I + G EK +++ MC ++ + P+
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 232 VTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQE 291
VTY AL+ F K R A +L D M G +P +Y L+ K+G++++A + E
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 292 MKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGR 351
M G T+YTY+ LI + R + A + ML+ C P++V+ +I+ L + G+
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 352 LEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYS 411
++A KL ME C+PNVVTY +I F E+M + GV P+ TY
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDG-FGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 412 ILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEY 471
+LID CK ++ AH LLEEM++ +P A Y +I G+ K + + L E+ +
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQD 876
Query: 472 CGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVY--TYNALMSGMVRAGMID 529
VY ++I + K RL A+ L E+ Y TYN+L+ + A ++
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936
Query: 530 DAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQH 575
A+ L M + G +P++ S ++ GL ++ A+ + + H
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 246/528 (46%), Gaps = 63/528 (11%)
Query: 145 WKSIQDMVRSTCVMGPSVL-SEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMIL 203
W+ +V + + +V +++++ L +A + +A+ ++++ C P TY++++
Sbjct: 286 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 204 MLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQ 263
+ + + + N M EG C+P +++L+ A+ G A +L +M + G
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEG-CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404
Query: 264 PTAKIYTTLVS-------------------IYFKL----------------------GEV 282
P +Y L+ Y ++ G+
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 283 EKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNL 342
EKA +++EM G+G TY++++ L A ++E A+ LF M + G D+ +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 343 INVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANG 402
++ +AG +E A K FN+M + C PNVVTY +I + ++K S A+ FE M + G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK-VSYANELFETMLSEG 583
Query: 403 VLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAAN 462
LP+ TYS LIDG CK +VEKA + E M C + ++ Y K+Y+ +
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERM-------CGSKDVPDVDMY--FKQYDDNS 634
Query: 463 ELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGM 522
E + Y ++ F K R+ +A L + M C+P+ Y+AL+ G+
Sbjct: 635 ER----------PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Query: 523 VRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDA 582
+ G +D+A + M E G + +++ +++ K A ++ +KM + P+
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 583 VSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKV 630
V Y ++ L + G +EA +LM+ M KG + + +TY+++++ G +
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 191/449 (42%), Gaps = 55/449 (12%)
Query: 113 KWAGRRRNF--EHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNIL 170
KW R N TY ALI + + + + + M+ C+ S +++
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 171 GKAKMVNKALSIF----------------YQIKSRKCKPTANTYNSMILMLMQEGYYEKI 214
KA V KA IF Q +P TY +++ + E+
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 215 HELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVS 274
+L + M EG C P+ + Y ALI K+G+ A + EM E+G T Y++L+
Sbjct: 659 RKLLDAMSMEG-CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 275 IYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKP 334
YFK+ + A ++ +M CA V YTE+I GL + G+ ++AY L M ++GC+P
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 335 DIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAW 394
++V +I+ G G++E L+L +M + PN VTY +I ++ A A
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA-LDVAHNL 836
Query: 395 FEKMKAN------------------------GVL-------PSPF--TYSILIDGFCKTN 421
E+MK G+L +PF Y +LID K
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ 896
Query: 422 RVEKAHLLLEEME--EKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARV 479
R+E A LLEE+ + Y SLI A + E A +LF E+ + +
Sbjct: 897 RLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 956
Query: 480 YAVMIKHFGKCGRLSDAVDLFNEMKKLRC 508
+ +IK + ++S+A+ L + + + C
Sbjct: 957 FCSLIKGLFRNSKISEALLLLDFISHMVC 985
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 169 ILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCF 228
I G K ++L + +I P + Y +I L++ E L E+
Sbjct: 856 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 229 PD-TVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALG 287
D + TY++LI + + +A +LF EM + G+ P + + +L+ F+ ++ +AL
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Query: 288 LVQEMKGKGCAL 299
L+ + C L
Sbjct: 976 LLDFISHMVCPL 987
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 250/519 (48%), Gaps = 6/519 (1%)
Query: 117 RRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMV 176
R + F + ALI L + + W Q++ RS + L+ +VN L K +
Sbjct: 192 RSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKM 251
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
K + Q++ + P TYN++I +G E+ EL N M +G P TY+
Sbjct: 252 EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS-PGVYTYNT 310
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
+I+ K G+ A +F EM +GL P + Y +L+ K G+V + + +M+ +
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
+ ++ ++ R+G ++ A F ++ + G PD V+ LI R G + A+
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
L N+M C +VVTYNT++ L + K EA F +M + P +T +ILIDG
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKM-LGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSS 476
CK ++ A L ++M+EK Y +L++G+GK + A E++ ++ +
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 477 ARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
Y++++ G L++A +++EM KP V N+++ G R+G D S L
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 537 RMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSE--IKPDAVSYNTILGCLSR 594
+M +G VPD S+N ++ G + +A + KM+ + + PD +YN+IL R
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 595 AGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDED 633
+EA +++ M +G D+ TY+ ++ G V +D
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMIN--GFVSQD 706
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 255/522 (48%), Gaps = 19/522 (3%)
Query: 120 NFEHNSTTYMALIRCLDET-----------RMI---GVMWKSIQDMVRST---CVMGPSV 162
NF+H S + A+I L + RMI GV I + + ST C SV
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV 167
Query: 163 LSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMC 222
++ +A+ + +A F ++S+ + + N++I L++ G+ E +Y E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 223 NEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEV 282
G + T + +++A K G+ +++E G+ P Y TL+S Y G +
Sbjct: 228 RSGVGI-NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 283 EKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNL 342
E+A L+ M GKG + VYTY +I GL + G+ E A +F ML+ G PD +L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 343 INVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANG 402
+ + G + + K+F+ M + P++V +++++ SLF +A +F +K G
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM-SLFTRSGNLDKALMYFNSVKEAG 405
Query: 403 VLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAAN 462
++P Y+ILI G+C+ + A L EM ++G Y ++++G K K A+
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 463 ELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGM 522
+LF E+ E + ++I K G L +A++LF +MK+ R + DV TYN L+ G
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 523 VRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDA 582
+ G ID A + M +P S++I++N L G A ++ +M IKP
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 583 VSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSIL 624
+ N+++ R+G + ++ M ++GF D I+Y++++
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 209/428 (48%), Gaps = 10/428 (2%)
Query: 159 GPSVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELY 218
G + ++N L K +A +F ++ P + TY S+++ ++G + +++
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 219 NEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFK 278
++M + PD V +S+++S F + G A+ F+ +KE GL P IYT L+ Y +
Sbjct: 364 SDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 279 LGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVL 338
G + A+ L EM +GCA+ V TY ++ GL + + +A LF M + PD
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 339 INNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKM 398
+ LI+ + G L++A++LF KM+ + + +VVTYNT++ F A + M
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG-FGKVGDIDTAKEIWADM 541
Query: 399 KANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGY---GKA 455
+ +LP+P +YSIL++ C + +A + +EM K P S+I GY G A
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Query: 456 KRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLR--CKPDVY 513
E+ E + C S Y +I F + +S A L +M++ + PDV+
Sbjct: 602 SDGESFLEKMISEGFVPDCIS---YNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 514 TYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKM 573
TYN+++ G R + +A +LR+M E G PD +++ ++NG A I +M
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Query: 574 QHSEIKPD 581
PD
Sbjct: 719 LQRGFSPD 726
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 194/403 (48%), Gaps = 3/403 (0%)
Query: 226 NCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKA 285
NC + + LI + + + A F ++ G + L+ ++G VE A
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 286 LGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKE-GCKPDIVLINNLIN 344
G+ QE+ G + VYT ++ L + G++E G F++ ++E G PDIV N LI+
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKV-GTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 345 VLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVL 404
G +E+A +L N M P V TYNTVI L + A F +M +G+
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCK-HGKYERAKEVFAEMLRSGLS 337
Query: 405 PSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANEL 464
P TY L+ CK V + + +M + P + S+++ + ++ + A
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 465 FLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVR 524
F +KE +Y ++I+ + + G +S A++L NEM + C DV TYN ++ G+ +
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 525 AGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVS 584
M+ +A L M E PD + I+++G K G + AME+F KM+ I+ D V+
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517
Query: 585 YNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
YNT+L + G + A + DM +K I+YS ++ A+
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 175/365 (47%), Gaps = 1/365 (0%)
Query: 268 IYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNM 327
++ L+ Y + ++ +A ++ KG +++ LI L R G VE A+G++ +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 328 LKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAP 387
+ G ++ +N ++N L + G++E ++++ P++VTYNT+I S + SK
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI-SAYSSKGL 285
Query: 388 ASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCS 447
EA M G P +TY+ +I+G CK + E+A + EM G P Y S
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 448 LINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLR 507
L+ K ++F +++ ++ M+ F + G L A+ FN +K+
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 508 CKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAM 567
PD Y L+ G R GMI A +L M + GC D+ ++N IL+GL K A
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 568 EIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
++F +M + PD+ + ++ + G + A L + M K D +TY+++L+
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 628 GKVDE 632
GKV +
Sbjct: 526 GKVGD 530
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 1/339 (0%)
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
C + LI+ +A ++ +A+ F + +G I N LI L R G +E A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
++ ++ NV T N ++ +L + + + +++ GV P TY+ LI
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKD-GKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSS 476
+ +E+A L+ M KGF P Y ++ING K +YE A E+F E+
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 477 ARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
+ Y ++ K G + + +F++M+ PD+ ++++MS R+G +D A
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 537 RMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAG 596
++E G +PD + I++ G + G AM + +M D V+YNTIL L +
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 597 MFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDEDRN 635
M EA +L +M + D T + +++ K+ +N
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 146/319 (45%), Gaps = 4/319 (1%)
Query: 124 NSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIF 183
++ Y LI+ MI V +M++ C M + I++ L K KM+ +A +F
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 184 YQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGK 243
++ R P + T +I + G + EL+ +M E D VTY+ L+ FGK
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDVVTYNTLLDGFGK 527
Query: 244 LGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYT 303
+G +A ++ +M + PT Y+ LV+ G + +A + EM K TV
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKME 363
+IKG R+G D M+ EG PD + N LI R + A L KME
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 364 ALQ--CKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTN 421
Q P+V TYN+++ F + EA KM GV P TY+ +I+GF +
Sbjct: 648 EEQGGLVPDVFTYNSILHG-FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD 706
Query: 422 RVEKAHLLLEEMEEKGFPP 440
+ +A + +EM ++GF P
Sbjct: 707 NLTEAFRIHDEMLQRGFSP 725
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 193 PTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIR 252
P TYNS++ ++ ++ + +M G PD TY+ +I+ F A R
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG-VNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 253 LFDEMKENGLQPTAK 267
+ DEM + G P K
Sbjct: 714 IHDEMLQRGFSPDDK 728
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 224/427 (52%), Gaps = 7/427 (1%)
Query: 199 NSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMK 258
N+ + +++ G E+ + M GN PD + + LI F +LG+ A ++ + ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGN-VPDIIPCTTLIRGFCRLGKTRKAAKILEILE 164
Query: 259 ENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVE 318
+G P Y ++S Y K GE+ AL ++ M + V TY +++ L +G+++
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLK 221
Query: 319 DAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVI 378
A + ML+ C PD++ LI R + A+KL ++M C P+VVTYN ++
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 379 KSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGF 438
+ + + EA + M ++G P+ T++I++ C T R A LL +M KGF
Sbjct: 282 NGICK-EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 439 PPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCS-SARVYAVMIKHFGKCGRLSDAV 497
P + LIN + A ++ ++ ++ GC ++ Y ++ F K ++ A+
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQH-GCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 498 DLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGL 557
+ M C PD+ TYN +++ + + G ++DA +L ++ GC P + ++N +++GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 558 AKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQ 617
AK+G +A+++ +M+ ++KPD ++Y++++G LSR G +EA + + G +
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 618 ITYSSIL 624
+T++SI+
Sbjct: 520 VTFNSIM 526
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 212/445 (47%), Gaps = 10/445 (2%)
Query: 170 LGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFP 229
LGK + K L I ++ P TYN MI + G + + M + P
Sbjct: 150 LGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSP 202
Query: 230 DTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLV 289
D VTY+ ++ + G+ A+ + D M + P YT L+ + V A+ L+
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 290 QEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRA 349
EM+ +GC V TY L+ G+ + GR+++A +M GC+P+++ N ++ +
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 350 GRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFT 409
GR DA KL M P+VVT+N +I L K A EKM +G P+ +
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR-KGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 410 YSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELK 469
Y+ L+ GFCK ++++A LE M +G P Y +++ K + E A E+ +L
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 470 EYCGCSSARV-YAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMI 528
GCS + Y +I K G+ A+ L +EM+ KPD TY++L+ G+ R G +
Sbjct: 442 SK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 529 DDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTI 588
D+A E G P+ + N I+ GL KS RA++ M + KP+ SY +
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 589 LGCLSRAGMFEEAARLMKDMNAKGF 613
+ L+ GM +EA L+ ++ KG
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 212/400 (53%), Gaps = 6/400 (1%)
Query: 229 PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGL 288
PD +TY+ +IS + K G +A+ + D M + P Y T++ G++++A+ +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 289 VQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGR 348
+ M + C V TYT LI+ R V A L M GC PD+V N L+N + +
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPF 408
GRL++A+K N M + C+PNV+T+N +++S+ S +A M G PS
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC-STGRWMDAEKLLADMLRKGFSPSVV 345
Query: 409 TYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL 468
T++ILI+ C+ + +A +LE+M + G P +Y L++G+ K K+ + A E +LE
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE-YLER 404
Query: 469 KEYCGCSSARV-YAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
GC V Y M+ K G++ DAV++ N++ C P + TYN ++ G+ +AG
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
A LL M PD +++ ++ GL++ G A++ F + + I+P+AV++N+
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
I+ L ++ + A + M +G + ++ +Y+ ++E +
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 195/386 (50%), Gaps = 7/386 (1%)
Query: 250 AIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIK 309
+ + M +G P TTL+ + +LG+ KA +++ ++G G V TY +I
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 310 GLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKP 369
G +AG + +A + M PD+V N ++ L +G+L+ A+++ ++M C P
Sbjct: 181 GYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 370 NVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLL 429
+V+TY +I++ A ++M+ G P TY++L++G CK R+++A
Sbjct: 238 DVITYTILIEATCRDSG-VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 430 LEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGK 489
L +M G P + ++ R+ A +L ++ S + ++I +
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 490 CGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINS 549
G L A+D+ +M + C+P+ +YN L+ G + +D A L RM GC PDI +
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 550 HNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMN 609
+N +L L K G + A+EI ++ P ++YNT++ L++AG +A +L+ +M
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 610 AKGFEYDQITYSSILEAV---GKVDE 632
AK + D ITYSS++ + GKVDE
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDE 502
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 194/389 (49%), Gaps = 8/389 (2%)
Query: 118 RRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAK--M 175
R + + TY ++R L ++ + + + M++ C P V++ + I +
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY--PDVITYTILIEATCRDSG 254
Query: 176 VNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYS 235
V A+ + +++ R C P TYN ++ + +EG ++ + N+M + G C P+ +T++
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQPNVITHN 313
Query: 236 ALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGK 295
++ + GR + A +L +M G P+ + L++ + G + +A+ ++++M
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 296 GCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDA 355
GC +Y L+ G + +++ A M+ GC PDIV N ++ L + G++EDA
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 356 LKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILID 415
+++ N++ + C P ++TYNTVI L ++ +A ++M+A + P TYS L+
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKA-GKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 416 GFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCS 475
G + +V++A E E G P + S++ G K+++ + A + FL GC
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID-FLVFMINRGCK 551
Query: 476 SARV-YAVMIKHFGKCGRLSDAVDLFNEM 503
Y ++I+ G +A++L NE+
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 159/324 (49%), Gaps = 6/324 (1%)
Query: 117 RRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSE--IVNILGKAK 174
R R + TY L+ + + + K + DM S C P+V++ I+ +
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC--QPNVITHNIILRSMCSTG 323
Query: 175 MVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTY 234
A + + + P+ T+N +I L ++G + ++ +M G C P++++Y
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG-CQPNSLSY 382
Query: 235 SALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKG 294
+ L+ F K + AI + M G P Y T+++ K G+VE A+ ++ ++
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 295 KGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLED 354
KGC+ + TY +I GL +AG+ A L M + KPD + ++L+ L R G++++
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 355 ALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILI 414
A+K F++ E + +PN VT+N+++ L +S+ A + M G P+ +Y+ILI
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ-TDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 415 DGFCKTNRVEKAHLLLEEMEEKGF 438
+G ++A LL E+ KG
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGL 585
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 206 bits (523), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 212/413 (51%), Gaps = 4/413 (0%)
Query: 216 ELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSI 275
+L+++M + FP V ++ L+SA KL + I L +M+ G++ + +++
Sbjct: 71 DLFSDMV-KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINC 129
Query: 276 YFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPD 335
+ +V AL ++ +M G T L+ G R RV DA L M++ G KPD
Sbjct: 130 FCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189
Query: 336 IVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWF 395
IV N +I+ L + R+ DA F ++E +PNVVTY ++ L S + S+A+
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS-SRWSDAARLL 248
Query: 396 EKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKA 455
M + P+ TYS L+D F K +V +A L EEM P Y SLING
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 456 KRYEAANELFLELKEYCGCSSARV-YAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYT 514
R + AN++F +L GC + V Y +I F K R+ D + LF EM + + T
Sbjct: 309 DRIDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 515 YNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQ 574
YN L+ G +AG +D A +M+ G PDI ++NI+L GL +G ++A+ IF MQ
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 575 HSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
E+ D V+Y T++ + + G EEA L ++ KG + D +TY++++ +
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 206/393 (52%), Gaps = 7/393 (1%)
Query: 246 RDI---SAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVY 302
RDI AI LF +M ++ P+ + L+S KL + + + L ++M+ G +Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 303 TYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKM 362
T+ +I +V A + MLK G +PD V I +L+N R R+ DA+ L +KM
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 363 EALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNR 422
+ KP++V YN +I SL ++K ++A +F++++ G+ P+ TY+ L++G C ++R
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKR-VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 423 VEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAV 482
A LL +M +K P Y +L++ + K + A ELF E+ Y+
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 483 MIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDG 542
+I R+ +A +F+ M C DV +YN L++G +A ++D L R M + G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 543 CVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAA 602
V + ++N ++ G ++G +A E F++M I PD +YN +LG L G E+A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 603 RLMKDMNAKGFEYDQITYSSILEAV---GKVDE 632
+ +DM + + D +TY++++ + GKV+E
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 220/446 (49%), Gaps = 2/446 (0%)
Query: 176 VNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYS 235
+N A+ +F + + P+ +N ++ +++ Y+ + L +M G D T++
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG-IRNDLYTFN 124
Query: 236 ALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGK 295
+I+ F + A+ + +M + G +P +LV+ + + V A+ LV +M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 296 GCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDA 355
G + Y +I L + RV DA+ F + ++G +P++V L+N L + R DA
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 356 LKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILID 415
+L + M + PNV+TY+ ++ + F EA FE+M + P TYS LI+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDA-FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 416 GFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCS 475
G C +R+++A+ + + M KG +Y +LING+ KAKR E +LF E+ + S
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 476 SARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLL 535
+ Y +I+ F + G + A + F++M PD++TYN L+ G+ G ++ A +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 536 RRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRA 595
M++ DI ++ ++ G+ K+G + A +F + +KPD V+Y T++ L
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 596 GMFEEAARLMKDMNAKGFEYDQITYS 621
G+ E L M +G + T S
Sbjct: 484 GLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 181/380 (47%), Gaps = 37/380 (9%)
Query: 163 LSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMC 222
+ +VN + V+ A+S+ ++ KP YN++I L + + + E+
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217
Query: 223 NEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEV 282
+G P+ VTY+AL++ R A RL +M + + P Y+ L+ + K G+V
Sbjct: 218 RKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 283 EKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNL 342
+A L +EM + TY+ LI GL R+++A +F M+ +GC D+V N L
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 343 INVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANG 402
IN +A R+ED +KLF +M N VTYNT+I+ F++ +A +F +M G
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA-GDVDKAQEFFSQMDFFG 395
Query: 403 VLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAAN 462
+ P +TY+IL+ G C +EKA ++ E+M+++ Y ++I G K + E A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 463 ELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGM 522
LF L +K L KPD+ TY +MSG+
Sbjct: 456 SLFCSL---------------------------------SLKGL--KPDIVTYTTMMSGL 480
Query: 523 VRAGMIDDAYSLLRRMEEDG 542
G++ + +L +M+++G
Sbjct: 481 CTKGLLHEVEALYTKMKQEG 500
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 160/336 (47%), Gaps = 11/336 (3%)
Query: 105 INVKIQFFKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLS 164
+N FFK R+ N TY AL+ L + + + DM++ S
Sbjct: 206 VNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 165 EIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNE 224
+++ K V +A +F ++ P TY+S+I L ++ +++++ M ++
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 225 GNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEK 284
G C D V+Y+ LI+ F K R ++LF EM + GL Y TL+ +F+ G+V+K
Sbjct: 325 G-CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 285 ALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLIN 344
A +M G + ++TY L+ GL G +E A +F +M K DIV +I
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 345 VLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVL 404
+ + G++E+A LF + KP++VTY T++ L +K E A + KMK G++
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC-TKGLLHEVEALYTKMKQEGLM 502
Query: 405 PSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPP 440
+ T S DG + + L+++M G+ P
Sbjct: 503 KNDCTLS---DG-----DITLSAELIKKMLSCGYAP 530
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 148/318 (46%), Gaps = 2/318 (0%)
Query: 121 FEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKAL 180
++ + Y A+I L +T+ + + +++ R + +VN L + + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 181 SIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISA 240
+ + +K P TY++++ ++ G + EL+ EM + PD VTYS+LI+
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM-SIDPDIVTYSSLING 304
Query: 241 FGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALT 300
R A ++FD M G Y TL++ + K VE + L +EM +G
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 301 VYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFN 360
TY LI+G +AG V+ A F M G PDI N L+ L G LE AL +F
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 361 KMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKT 420
M+ + ++VTY TVI+ + ++ EA + F + G+ P TY+ ++ G C
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKT-GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 421 NRVEKAHLLLEEMEEKGF 438
+ + L +M+++G
Sbjct: 484 GLLHEVEALYTKMKQEGL 501
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 206 bits (523), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 236/456 (51%), Gaps = 4/456 (0%)
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
A S+ ++ +P T+N++I L EG + L + M G C PD VTY++++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG-CQPDVVTYNSIV 200
Query: 239 SAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCA 298
+ + G A+ L +M+E ++ Y+T++ + G ++ A+ L +EM+ KG
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260
Query: 299 LTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKL 358
+V TY L++GL +AG+ D L +M+ P+++ N L++V + G+L++A +L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 359 FNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFC 418
+ +M PN++TYNT++ + + SEA+ + M N P T++ LI G+C
Sbjct: 321 YKEMITRGISPNIITYNTLMDG-YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 419 KTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSAR 478
RV+ + + ++G Y L+ G+ ++ + + A ELF E+ +
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 479 VYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRM 538
Y +++ G+L A+++F +++K + + Y ++ GM + G ++DA++L +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 539 EEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMF 598
G P++ ++ ++++GL K G A + KM+ P+ +YNT++ R G
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 599 EEAARLMKDMNAKGFEYDQITYSSILEAV--GKVDE 632
+A+L+++M + GF D + +++ + G++D+
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK 595
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 213/451 (47%), Gaps = 2/451 (0%)
Query: 121 FEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKAL 180
+E ++TT+ LI+ L + + MV + C + IVN + ++ + AL
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 181 SIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISA 240
+ +++ R K TY+++I L ++G + L+ EM +G VTY++L+
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG-IKSSVVTYNSLVRG 272
Query: 241 FGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALT 300
K G+ L +M + P + L+ ++ K G++++A L +EM +G +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 301 VYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFN 360
+ TY L+ G R+ +A + M++ C PDIV +LI R++D +K+F
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 361 KMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKT 420
+ N VTY+ +++ +S A F++M ++GVLP TY IL+DG C
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQS-GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 421 NRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVY 480
++EKA + E++++ Y ++I G K + E A LF L + Y
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 481 AVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEE 540
VMI K G LS+A L +M++ P+ TYN L+ +R G + + L+ M+
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 541 DGCVPDINSHNIILNGLAKSGGPKRAMEIFT 571
G D +S ++++ L K +++ +
Sbjct: 572 CGFSADASSIKMVIDMLLSGELDKSFLDMLS 602
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 209/471 (44%), Gaps = 45/471 (9%)
Query: 203 LMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGL 262
L+ ++ ++ + N CF + L S + +D AI LF EM +
Sbjct: 31 LLCTISSFFSSCERDFSSISNGNVCFRE-----RLRSGIVDIKKD-DAIALFQEMIRSRP 84
Query: 263 QPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYG 322
P+ ++ S + + L ++++ G A +YT +I R + AY
Sbjct: 85 LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144
Query: 323 LFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLF 382
+ ++K G +PD N LI L G++ +A+ L ++M C+P+VVTYN+++ +
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204
Query: 383 ESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCP 442
S S A KM+ V FTYS +ID C+ ++ A L +EME KG
Sbjct: 205 RS-GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 443 AAYCSLINGYGKAKRY-----------------------------------EAANELFLE 467
Y SL+ G KA ++ + ANEL+ E
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 468 LKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
+ + Y ++ + RLS+A ++ + M + +C PD+ T+ +L+ G
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
+DD + R + + G V + +++I++ G +SG K A E+F +M + PD ++Y
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV---GKVDEDRN 635
+L L G E+A + +D+ + + Y++I+E + GKV++ N
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 149/580 (25%), Positives = 270/580 (46%), Gaps = 52/580 (8%)
Query: 93 RLVHQVLNIDVEINVKIQFFKWAGRR------RNFEHNSTTYMALIRCLDETRMIGVMWK 146
+L HQV+ I V I + + A + + + + Y ++ T G K
Sbjct: 172 KLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRT---GKYEK 228
Query: 147 SIQDMVRSTCVMGPS----VLSEIVNILGK-AKMVNKALSIFYQIKSRKCKPTANTYNSM 201
+I D+ MGPS + I+++ GK + K L + +++S+ K T +++
Sbjct: 229 AI-DLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTV 287
Query: 202 ILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENG 261
+ +EG + E + E+ + G P TVTY+AL+ FGK G A+ + EM+EN
Sbjct: 288 LSACAREGLLREAKEFFAELKSCGY-EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 262 LQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAY 321
+ Y LV+ Y + G ++A G+++ M KG TYT +I G+AG+ ++A
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 322 GLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSL 381
LF +M + GC P+ N ++++LG+ R + +K+ M++ C PN T+NT++ +L
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-AL 465
Query: 382 FESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPC 441
+K + F +MK+ G P T++ LI + + A + EM GF C
Sbjct: 466 CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC 525
Query: 442 PAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGK------------ 489
Y +L+N + + + + ++K + Y++M++ + K
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEN 585
Query: 490 -----------------------CGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAG 526
C L+ + F KK KPD+ +N+++S R
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNN 645
Query: 527 MIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYN 586
M D A +L + EDG PD+ ++N +++ + G +A EI ++ S++KPD VSYN
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 587 TILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
T++ R G+ +EA R++ +M +G TY++ +
Sbjct: 706 TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 132/568 (23%), Positives = 246/568 (43%), Gaps = 62/568 (10%)
Query: 103 VEINVKIQFFKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSV 162
V NV + F GR ++ ++ LDE R G+ + TC
Sbjct: 246 VTYNVILDVFGKMGR---------SWRKILGVLDEMRSKGLKFDEF------TC------ 284
Query: 163 LSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMC 222
S +++ + ++ +A F ++KS +P TYN+++ + + G Y + + EM
Sbjct: 285 -STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM- 342
Query: 223 NEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEV 282
E +C D+VTY+ L++A+ + G A + + M + G+ P A YTT++ Y K G+
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Query: 283 EKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNL 342
++AL L MK GC TY ++ LG+ R + + +M GC P+ N +
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 343 INVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANG 402
+ + G G + ++F +M++ +P+ T+NT+I S + +AS + +M G
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI-SAYGRCGSEVDASKMYGEMTRAG 521
Query: 403 VLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAAN 462
TY+ L++ + ++ +M+ KGF P +Y ++ Y K Y
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 463 ELFLELKE--------------------YCGCSSARVYAVMIKH---------------F 487
+ +KE S R + + KH F
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 488 GKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDI 547
+ A + +++ PD+ TYN+LM VR G A +L+ +E+ PD+
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701
Query: 548 NSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKD 607
S+N ++ G + G + A+ + ++M I+P +YNT + + GMF E +++
Sbjct: 702 VSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIEC 761
Query: 608 MNAKGFEYDQITYSSILEA---VGKVDE 632
M +++T+ +++ GK E
Sbjct: 762 MAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 207/434 (47%), Gaps = 5/434 (1%)
Query: 200 SMILMLMQEGYYEKIHELYNEMC---NEGNCFPDTVTYSALISAFGKLGRDISAIRLFDE 256
S++ L G++E+ L+ + N G D + G+ + A +L D+
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 257 MKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGR 316
+ + YTT++ Y + G+ EKA+ L + MK G + T+ TY ++ G+ GR
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 317 V-EDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYN 375
G+ M +G K D + +++ R G L +A + F ++++ +P VTYN
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 376 TVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEE 435
+++ +F +EA + ++M+ N TY+ L+ + + ++A ++E M +
Sbjct: 321 ALLQ-VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 436 KGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSD 495
KG P Y ++I+ YGKA + + A +LF +KE + Y ++ GK R ++
Sbjct: 380 KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
Query: 496 AVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILN 555
+ + +MK C P+ T+N +++ GM + R M+ G PD ++ N +++
Sbjct: 440 MIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLIS 499
Query: 556 GLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEY 615
+ G A +++ +M + +YN +L L+R G + ++ DM +KGF+
Sbjct: 500 AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 616 DQITYSSILEAVGK 629
+ +YS +L+ K
Sbjct: 560 TETSYSLMLQCYAK 573
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 214/478 (44%), Gaps = 37/478 (7%)
Query: 159 GPSVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELY 218
G + ++ + GKA + +ALS+ +++ C + TYN ++ ++ G+ ++ +
Sbjct: 315 GTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVI 374
Query: 219 NEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFK 278
M +G P+ +TY+ +I A+GK G++ A++LF MKE G P Y ++S+ K
Sbjct: 375 EMMTKKG-VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 279 LGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVL 338
+ + ++ +MK GC+ T+ ++ G G + +F M G +PD
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 339 INNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKM 398
N LI+ GR G DA K++ +M V TYN ++ +L K M
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL-ARKGDWRSGENVISDM 552
Query: 399 KANGVLPSPFTYSILIDGFCK----------TNRVEKAHLLLEEM--------------- 433
K+ G P+ +YS+++ + K NR+++ + M
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 434 ----------EEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVM 483
++ G+ P + S+++ + + Y+ A + ++E Y +
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 484 IKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGC 543
+ + + G A ++ ++K + KPD+ +YN ++ G R G++ +A +L M E G
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Query: 544 VPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEA 601
P I ++N ++G G ++ M ++ +P+ +++ ++ RAG + EA
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 201/429 (46%), Gaps = 6/429 (1%)
Query: 148 IQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQ 207
I+ M + + + +++ GKA ++AL +FY +K C P TYN+++ +L
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL-- 431
Query: 208 EGYYEKIHELYNEMCN--EGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPT 265
G + +E+ +C+ C P+ T++ +++ G G D R+F EMK G +P
Sbjct: 432 -GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 266 AKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFM 325
+ TL+S Y + G A + EM G V TY L+ L R G +
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 326 NMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESK 385
+M +G KP + ++ + G ++ N+++ Q P+ + T++ + F+ +
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 386 APASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAY 445
A A A F K +G P ++ ++ F + N ++A +LE + E G P Y
Sbjct: 611 ALAGSERA-FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 446 CSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKK 505
SL++ Y + A E+ L++ Y +IK F + G + +AV + +EM +
Sbjct: 670 NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE 729
Query: 506 LRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKR 565
+P ++TYN +SG GM + ++ M ++ C P+ + ++++G ++G
Sbjct: 730 RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Query: 566 AMEIFTKMQ 574
AM+ +K++
Sbjct: 790 AMDFVSKIK 798
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 189/405 (46%), Gaps = 6/405 (1%)
Query: 236 ALISAFGKLGRDISAIRLFDEM----KENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQE 291
+L+ G A+ LF+ + L+ ++ V I + + A L+ +
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 292 MKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGR 351
+ + L V YT ++ R G+ E A LF M + G P +V N +++V G+ GR
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 352 -LEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTY 410
L + ++M + K + T +TV+ S + EA +F ++K+ G P TY
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVL-SACAREGLLREAKEFFAELKSCGYEPGTVTY 319
Query: 411 SILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKE 470
+ L+ F K +A +L+EMEE P Y L+ Y +A + A + + +
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 471 YCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDD 530
+A Y +I +GK G+ +A+ LF MK+ C P+ TYNA++S + + ++
Sbjct: 380 KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
Query: 531 AYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILG 590
+L M+ +GC P+ + N +L G K +F +M+ +PD ++NT++
Sbjct: 440 MIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLIS 499
Query: 591 CLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDEDRN 635
R G +A+++ +M GF TY+++L A+ + + R+
Sbjct: 500 AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRS 544
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Query: 183 FYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFG 242
F K KP +NSM+ + + Y++ + E E PD VTY++L+ +
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGIL-ESIREDGLSPDLVTYNSLMDMYV 677
Query: 243 KLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVY 302
+ G A + ++++ L+P Y T++ + + G +++A+ ++ EM +G ++
Sbjct: 678 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 303 TYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKM 362
TY + G G + + M K C+P+ + +++ RAG+ +A+ +K+
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Query: 363 EAL 365
+
Sbjct: 798 KTF 800
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 233/458 (50%), Gaps = 10/458 (2%)
Query: 178 KALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSAL 237
+A+++F Q+ P T+N++I L EG + L N+M +G D VTY +
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTI 267
Query: 238 ISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGC 297
++ K+G SA+ L +M+E ++P IY+ ++ K G A L EM KG
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 298 ALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALK 357
A V+TY +I G GR DA L +M++ PD++ N LI+ + G+L +A K
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 358 LFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGF 417
L ++M P+ VTYN++I F +A F+ M + P T++ +ID +
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYG-FCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVY 442
Query: 418 CKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSA 477
C+ RV++ LL E+ +G Y +LI+G+ + AA +LF E+ + C
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 478 RVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRR 537
+++ F + +L +A++LF ++ + D YN ++ GM + +D+A+ L
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 538 MEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTIL-GCLSRAG 596
+ G PD+ ++N++++G A +F KM+ + +PD +YNT++ GCL +AG
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL-KAG 621
Query: 597 MFEEAARLMKDMNAKGFEYDQITYSSILEAV--GKVDE 632
+++ L+ +M + GF D T + + + G++D+
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDK 659
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 186/398 (46%), Gaps = 22/398 (5%)
Query: 250 AIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIK 309
AI FD M + TA ++ ++ ++ + A+ L ++M+ + L +Y++ LIK
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 310 GLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL------------- 356
++ + F + K G +PD+V N L++ L R+ +AL
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209
Query: 357 --KLFNKMEALQCKPNVVTYNTVIKSL-FESKAPASEASAWFEKMKANGVLPSPFTYSIL 413
LF++M + P V+T+NT+I L E + EA+A KM G+ TY +
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL--EAAALVNKMVGKGLHIDVVTYGTI 267
Query: 414 IDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCG 473
++G CK + A LL +MEE P Y ++I+ K + A LF E+ E
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 474 CSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYS 533
+ Y MI F GR SDA L +M + PDV T+NAL+S V+ G + +A
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 534 LLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLS 593
L M PD ++N ++ G K A +F M PD V++NTI+
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYC 443
Query: 594 RAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVD 631
RA +E +L+++++ +G + TY++++ +VD
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 480 YAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRME 539
+ ++IK F C +LS ++ F ++ KL +PDV T+N L+ G+ I +A +L M
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 540 EDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFE 599
E G + A+ +F +M + P +++NT++ L G
Sbjct: 204 ETGFL--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL 243
Query: 600 EAARLMKDMNAKGFEYDQITYSSILEAVGKVDEDRN 635
EAA L+ M KG D +TY +I+ + K+ + ++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 118 RRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMV-RSTCVMGPSVLSEIVNILG--KAK 174
RR N+TTY LI E + Q+M+ C P ++ + + G + +
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC---PDTITCNILLYGFCENE 516
Query: 175 MVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNE--GNCFPDTV 232
+ +AL +F I+ K YN +I+ M +G K+ E ++ C+ PD
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYN-IIIHGMCKG--SKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 233 TYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEM 292
TY+ +IS F A LF +MK+NG +P Y TL+ K GE++K++ L+ EM
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 293 KGKGCALTVYTYTELIKGLGRAGRVEDAY 321
+ G + +T +++ L GR++ ++
Sbjct: 634 RSNGFSGDAFT-IKMVADLITDGRLDKSF 661
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 10/140 (7%)
Query: 493 LSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNI 552
L DA+D F+ M + R N ++ VR D A SL R+ME +I S NI
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 553 ILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKG 612
++ ++ F K+ +PD V++NT+L L EA L M G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 613 FEYDQITYSSILEAVGKVDE 632
F LEAV D+
Sbjct: 207 F----------LEAVALFDQ 216
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 256/521 (49%), Gaps = 16/521 (3%)
Query: 118 RRNFEHNSTTYMALIR--CLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKA-- 173
++ F ++ + L++ C D+ R M ++ M C+ P+V S NIL K
Sbjct: 115 KKGFRVDAIAFTPLLKGLCADK-RTSDAMDIVLRRMTELGCI--PNVFS--YNILLKGLC 169
Query: 174 --KMVNKALSIFYQIKSRK---CKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCF 228
+AL + + + + P +Y ++I +EG +K + Y+EM + G
Sbjct: 170 DENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRG-IL 228
Query: 229 PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGL 288
PD VTY+++I+A K A+ + + M +NG+ P Y +++ Y G+ ++A+G
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 289 VQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGR 348
+++M+ G V TY+ L+ L + GR +A +F +M K G KP+I L+
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPF 408
G L + L + M P+ ++ +I + + + +A F KM+ G+ P+
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICA-YAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 409 TYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL 468
TY +I CK+ RVE A L E+M ++G P Y SLI+G ++E A EL LE+
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467
Query: 469 KEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMI 528
+ C + + +I K GR+ ++ LF M ++ KP+V TYN L++G AG +
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 529 DDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTI 588
D+A LL M G P+ +++ ++NG K + A+ +F +M+ S + PD ++YN I
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Query: 589 LGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
L L + A L + G + + TY+ IL + K
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 231/494 (46%), Gaps = 8/494 (1%)
Query: 141 IGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNS 200
IG + K D V V S +++ L K +A IF + R KP TY +
Sbjct: 286 IGFLKKMRSDGVEPDVV----TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341
Query: 201 MILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKEN 260
++ +G ++H L + M G PD +S LI A+ K G+ A+ +F +M++
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNG-IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400
Query: 261 GLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDA 320
GL P A Y ++ I K G VE A+ ++M +G + Y LI GL + E A
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460
Query: 321 YGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKS 380
L + ML G + + N++I+ + GR+ ++ KLF M + KPNV+TYNT+I
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLING 520
Query: 381 LFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPP 440
+ EA M + G+ P+ TYS LI+G+CK +R+E A +L +EME G P
Sbjct: 521 -YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579
Query: 441 CPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLF 500
Y ++ G + +R AA EL++ + E Y +++ K DA+ +F
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 639
Query: 501 NEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKS 560
+ + K + T+N ++ +++ G D+A L +G VP+ ++ ++ +
Sbjct: 640 QNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 699
Query: 561 GGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITY 620
G + ++F M+ + D+ N I+ L + G A + ++ K F + T
Sbjct: 700 GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTA 759
Query: 621 SSILEAV--GKVDE 632
S ++ + GK E
Sbjct: 760 SLFIDLLSGGKYQE 773
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 195/411 (47%), Gaps = 4/411 (0%)
Query: 223 NEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKEN---GLQPTAKIYTTLVSIYFKL 279
E C P+ +Y+ L+ R A+ L M ++ G P YTT+++ +FK
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209
Query: 280 GEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLI 339
G+ +KA EM +G V TY +I L +A ++ A + M+K G PD +
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269
Query: 340 NNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMK 399
N++++ +G+ ++A+ KM + +P+VVTY+ ++ L ++ EA F+ M
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN-GRCMEARKIFDSMT 328
Query: 400 ANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYE 459
G+ P TY L+ G+ + + H LL+ M G P + LI Y K + +
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 460 AANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALM 519
A +F ++++ +A Y +I K GR+ DA+ F +M P YN+L+
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 520 SGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIK 579
G+ + A L+ M + G + N I++ K G + ++F M +K
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 580 PDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKV 630
P+ ++YNT++ AG +EA +L+ M + G + + +TYS+++ K+
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 159/359 (44%), Gaps = 10/359 (2%)
Query: 283 EKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCK---PDIVLI 339
E A + E+ +G ++Y + + R A + M + G PD+
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAA-AVSRYNRMARAGADEVTPDLCTY 90
Query: 340 NNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMK 399
LI RAGRL+ + + + + + ++K L K + +M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 400 ANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEK---GFPPCPAAYCSLINGYGKAK 456
G +P+ F+Y+IL+ G C NR ++A LL M + G PP +Y ++ING+ K
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 457 RYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYN 516
+ A + E+ + Y +I K + A+++ N M K PD TYN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 517 ALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHS 576
+++ G +G +A L++M DG PD+ +++++++ L K+G A +IF M
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 577 EIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV---GKVDE 632
+KP+ +Y T+L + G E L+ M G D +S ++ A GKVD+
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQ 389
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 155/359 (43%), Gaps = 38/359 (10%)
Query: 117 RRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMV 176
R++ N+ TY A ++ IL K+ V
Sbjct: 398 RQQGLNPNAVTYGA-----------------------------------VIGILCKSGRV 422
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
A+ F Q+ P YNS+I L +E+ EL EM + G C +T+ +++
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNS 481
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
+I + K GR I + +LF+ M G++P Y TL++ Y G++++A+ L+ M G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
TY+ LI G + R+EDA LF M G PDI+ N ++ L + R A
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
+L+ ++ + + TYN ++ L ++K +A F+ + + T++I+ID
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKL-TDDALQMFQNLCLMDLKLEARTFNIMIDA 660
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCS 475
K R ++A L G P Y + E ++LFL +++ GC+
Sbjct: 661 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN-GCT 718
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 235/466 (50%), Gaps = 8/466 (1%)
Query: 171 GKAKMVNKALSIFYQ-IKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG---N 226
GKA + +KA+ +F++ + +CK + ++NS++ +++ EG Y + E Y+ + N N
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 227 CFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKAL 286
P+ ++++ +I A KL AI +F M E P Y TL+ K +++A+
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 287 GLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVL 346
L+ EM+ +GC+ + Y LI GL + G + L NM +GC P+ V N LI+ L
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 347 GRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPS 406
G+L+ A+ L +M + +C PN VTY T+I L + + A++A M+ G +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR-ATDAVRLLSSMEERGYHLN 361
Query: 407 PFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFL 466
YS+LI G K + E+A L +M EKG P Y L++G + + A E+
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 467 ELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAG 526
+ +A Y+ ++K F K G +AV ++ EM K C + + Y+ L+ G+ G
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 527 MIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKM---QHSEIKPDAV 583
+ +A + +M G PD +++ I+ GL G A++++ +M + + +PD V
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 584 SYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
+YN +L L A L+ M +G + D IT ++ L + +
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/552 (26%), Positives = 255/552 (46%), Gaps = 59/552 (10%)
Query: 25 QTENEIVHMFQLSGPIDEMRNFPVSKKFARKDTSARKLDER-FIRILKIFKWGPDAEKAL 83
T + ++ + SG D V K +R R + ER FI + + + +KA+
Sbjct: 78 STLSSMIESYANSGDFDS-----VEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAV 132
Query: 84 EVLKMRVDH-RLVHQVLNIDVEINVKI---------QFFKW---AGRRRNFEHNSTTYMA 130
++ VD R V + + +NV I +F+ + + N N ++
Sbjct: 133 DLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNL 192
Query: 131 LIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIKSRK 190
+I+ L + R + + + M C+ +++ L K + +++A+ + +++S
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252
Query: 191 CKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISA 250
C P+ YN +I L ++G ++ +L + M +G C P+ VTY+ LI G+ A
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG-CVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 251 IRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKG 310
+ L + M + P Y TL++ K A+ L+ M+ +G L + Y+ LI G
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 311 LGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPN 370
L + G+ E+A L+ M ++GCKP+IV+ + L++ L R G+ +A ++ N+M A C PN
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 371 VVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLL 430
TY++++K F++ W E M G + F YS+LIDG C RV++A ++
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKE-MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 431 EEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKC 490
+M G P AY S+I G CG
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGL-------------------CGI---------------- 515
Query: 491 GRLSDAVDLFNEM---KKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDI 547
G + A+ L++EM ++ + +PDV TYN L+ G+ I A LL M + GC PD+
Sbjct: 516 GSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDV 575
Query: 548 NSHNIILNGLAK 559
+ N LN L++
Sbjct: 576 ITCNTFLNTLSE 587
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 215/444 (48%), Gaps = 10/444 (2%)
Query: 196 NTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFD 255
+T +SMI G ++ + +L + + E + ++ + A+GK A+ LF
Sbjct: 78 STLSSMIESYANSGDFDSVEKLLSRIRLENRVIIER-SFIVVFRAYGKAHLPDKAVDLFH 136
Query: 256 EM-KENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTV----YTYTELIKG 310
M E + + K + +++++ G + L + + + ++ +IK
Sbjct: 137 RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKA 196
Query: 311 LGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPN 370
L + V+ A +F M + C PD L++ L + R+++A+ L ++M++ C P+
Sbjct: 197 LCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPS 256
Query: 371 VVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLL 430
V YN +I L + K + + + M G +P+ TY+ LI G C +++KA LL
Sbjct: 257 PVIYNVLIDGLCK-KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 431 EEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKC 490
E M P Y +LING K +R A L ++E + +Y+V+I K
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Query: 491 GRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSH 550
G+ +A+ L+ +M + CKP++ Y+ L+ G+ R G ++A +L RM GC+P+ ++
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 551 NIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNA 610
+ ++ G K+G + A++++ +M + + Y+ ++ L G +EA + M
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Query: 611 KGFEYDQITYSSILE---AVGKVD 631
G + D + YSSI++ +G +D
Sbjct: 496 IGIKPDTVAYSSIIKGLCGIGSMD 519
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 151/341 (44%), Gaps = 19/341 (5%)
Query: 124 NSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIF 183
N TY LI L + R + + M + + S +++ L K +A+S++
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 184 YQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGK 243
++ + CKP Y+ ++ L +EG + E+ N M G C P+ TYS+L+ F K
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG-CLPNAYTYSSLMKGFFK 444
Query: 244 LGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYT 303
G A++++ EM + G Y+ L+ +G V++A+ + +M G
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 304 YTELIKGLGRAGRVEDAYGLFMNML---KEGCKPDIVLINNLINVLGRAGRLEDALKLFN 360
Y+ +IKGL G ++ A L+ ML + +PD+V N L++ L + A+ L N
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLN 564
Query: 361 KMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKT 420
M C P+V+T NT + +L E + ++ E+ L+ K
Sbjct: 565 SMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEE---------------LVVRLLKR 609
Query: 421 NRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAA 461
RV A ++E M K P + + ++ K K+ AA
Sbjct: 610 QRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 247/512 (48%), Gaps = 7/512 (1%)
Query: 123 HNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSI 182
H+ TY I C + + + M++ LS ++N +K ++ A+++
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 183 FYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFG 242
Q+ KP T+ ++I L + L ++M G C PD VTY +++
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLC 234
Query: 243 KLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVY 302
K G A+ L ++M+ ++ I+ T++ K VE A+ L EM+ KG V
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 303 TYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKM 362
TY LI L GR DA L NML++ P++V N LI+ + G+L +A KL +M
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 363 EALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNR 422
P+ +TYN +I F EA F+ M + LP+ TY+ LI+GFCK R
Sbjct: 355 IQRSIDPDTITYNLLING-FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 423 VEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAV 482
VE L EM ++G Y ++I G+ +A ++A +F ++ + Y++
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 483 MIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDG 542
++ G+L A+ +F ++K + +++ YN ++ GM +AG + +A+ L +
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS--- 530
Query: 543 CVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAA 602
PD+ ++N +++GL + A ++F KM+ P++ +YNT++ R +A
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 603 RLMKDMNAKGFEYDQITYSSILEAV--GKVDE 632
L+K+M + GF D T S + + G++D+
Sbjct: 591 ELIKEMRSSGFVGDASTISLVTNMLHDGRLDK 622
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 221/460 (48%), Gaps = 5/460 (1%)
Query: 176 VNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYS 235
V+ A+ +F + + P+ +N ++ + + +E + L +M G D TYS
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG-ISHDLYTYS 122
Query: 236 ALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGK 295
I+ F + + A+ + +M + G +P ++L++ Y + A+ LV +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 296 GCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDA 355
G +T+T LI GL + +A L M++ GC+PD+V ++N L + G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 356 LKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILID 415
L L NKMEA + K NVV +NT+I SL + + A F +M+ G+ P+ TY+ LI+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRH-VEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 416 GFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCS 475
C R A LL M EK P + +LI+ + K + A +L E+ +
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 476 SARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLL 535
Y ++I F RL +A +F M C P++ TYN L++G + ++D L
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 536 RRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRA 595
R M + G V + ++ I+ G ++G A +F +M + + D ++Y+ +L L
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 596 GMFEEAARLMKDMNAKGFEYDQITYSSILEAV---GKVDE 632
G + A + K + E + Y++++E + GKV E
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 158/289 (54%), Gaps = 3/289 (1%)
Query: 342 LINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASE-ASAWFEKMKA 400
L N L +++DA+ LF M + P++V +N ++ ++ +K E + E+M+
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAV--AKMNKFELVISLGEQMQT 111
Query: 401 NGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEA 460
G+ +TYSI I+ FC+ +++ A +L +M + G+ P SL+NGY +KR
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 461 ANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMS 520
A L ++ E + +I + S+AV L ++M + C+PD+ TY +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 521 GMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKP 580
G+ + G ID A +LL +ME ++ N I++ L K + A+++FT+M+ I+P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 581 DAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
+ V+YN+++ CL G + +A+RL+ +M K + +T++++++A K
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%)
Query: 374 YNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEM 433
Y ++++ +A F M + PS ++ L+ K N+ E L E+M
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 434 EEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRL 493
+ G Y IN + + + A + ++ + + ++ + R+
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 494 SDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNII 553
SDAV L ++M ++ KPD +T+ L+ G+ +A +L+ +M + GC PD+ ++ +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 554 LNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGF 613
+NGL K G A+ + KM+ + IK + V +NTI+ L + E A L +M KG
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 614 EYDQITYSSILEAV 627
+ +TY+S++ +
Sbjct: 290 RPNVVTYNSLINCL 303
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 220/447 (49%), Gaps = 2/447 (0%)
Query: 166 IVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG 225
++N + ++ AL++ ++ +P+ T +S++ L ++M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 226 NCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKA 285
PDT+T++ LI + A+ L D M + G QP Y +V+ K G+++ A
Sbjct: 186 Y-RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 286 LGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINV 345
L+ +M+ V Y+ +I L + +DA LF M +G +P+++ ++LI+
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 346 LGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLP 405
L R DA +L + M + PNVVT+N +I + F + EA +++M + P
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDA-FVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 406 SPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELF 465
FTYS LI+GFC +R+++A + E M K P Y +LING+ KAKR + ELF
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 466 LELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRA 525
E+ + + Y +I F + +A +F +M P++ TYN L+ G+ +
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 526 GMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSY 585
G ++ A + ++ P I ++NI++ G+ K+G + ++F + +KPD + Y
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 586 NTILGCLSRAGMFEEAARLMKDMNAKG 612
NT++ R G+ EEA L + M G
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDG 570
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 239/470 (50%), Gaps = 6/470 (1%)
Query: 160 PSVL--SEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHEL 217
PS+ +++++ + K K + +S+ +++ TYN +I + L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 218 YNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYF 277
+M G P VT S+L++ + R A+ L D+M E G +P +TTL+ F
Sbjct: 143 LGKMMKLGY-EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 278 KLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIV 337
+ +A+ LV M +GC + TY ++ GL + G ++ A+ L M + ++V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 338 LINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEK 397
+ + +I+ L + +DAL LF +ME +PNV+TY+++I L + S+AS
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER-WSDASRLLSD 320
Query: 398 MKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKR 457
M + P+ T++ LID F K ++ +A L +EM ++ P Y SLING+ R
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 458 YEAANELF-LELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYN 516
+ A +F L + + C + Y +I F K R+ + V+LF EM + + TY
Sbjct: 381 LDEAKHMFELMISKDC-FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 517 ALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHS 576
L+ G +A D+A + ++M DG P+I ++N +L+GL K+G ++AM +F +Q S
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 577 EIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
+++P +YN ++ + +AG E+ L ++ KG + D I Y++++
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 224/466 (48%), Gaps = 2/466 (0%)
Query: 117 RRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMV 176
+R HN TY LI C I + + M++ LS ++N K +
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
+ A+++ Q+ +P T+ ++I L + L + M G C P+ VTY
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGV 230
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
+++ K G A L ++M+ ++ IY+T++ K + AL L EM+ KG
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
V TY+ LI L R DA L +M++ P++V N LI+ + G+L +A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
KL+++M P++ TY+++I F EA FE M + P+ TY+ LI+G
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLING-FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSS 476
FCK R+++ L EM ++G Y +LI+G+ +A+ + A +F ++ +
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 477 ARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
Y ++ K G+L A+ +F +++ + +P +YTYN ++ GM +AG ++D + L
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 537 RMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDA 582
+ G PD+ +N +++G + G + A +F KM+ PD+
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 197/402 (49%), Gaps = 1/402 (0%)
Query: 228 FPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALG 287
P ++ L+SA K+ + I L ++M+ G+ Y L++ + + ++ AL
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 288 LVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLG 347
L+ +M G ++ T + L+ G R+ DA L M++ G +PD + LI+ L
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 348 RAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSP 407
+ +A+ L ++M C+PN+VTY V+ L + + A KM+A + +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK-RGDIDLAFNLLNKMEAAKIEANV 260
Query: 408 FTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLE 467
YS +ID CK + A L EME KG P Y SLI+ +R+ A+ L +
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 468 LKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
+ E + + +I F K G+L +A L++EM K PD++TY++L++G
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
+D+A + M C P++ ++N ++NG K+ +E+F +M + + V+Y T
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
++ +A + A + K M + G + +TY+++L+ + K
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 189/377 (50%), Gaps = 1/377 (0%)
Query: 250 AIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIK 309
AI LF M ++ P+ + L+S K+ + + + L ++M+ G + +YTY LI
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 310 GLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKP 369
R ++ A L M+K G +P IV +++L+N R+ DA+ L ++M + +P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 370 NVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLL 429
+ +T+ T+I LF ASEA A ++M G P+ TY ++++G CK ++ A L
Sbjct: 189 DTITFTTLIHGLFLHNK-ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 430 LEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGK 489
L +ME Y ++I+ K + + A LF E++ + Y+ +I
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 490 CGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINS 549
R SDA L ++M + + P+V T+NAL+ V+ G + +A L M + PDI +
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 550 HNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMN 609
++ ++NG A +F M + P+ V+YNT++ +A +E L ++M+
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 610 AKGFEYDQITYSSILEA 626
+G + +TY++++
Sbjct: 428 QRGLVGNTVTYTTLIHG 444
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 166/326 (50%), Gaps = 36/326 (11%)
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKME 363
Y E+++ + +++DA GLF M+K P I N L++ + + + + + L KM+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 364 ALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRV 423
L N+ TYN +I + F ++ S A A KM G PS T S L++G+C R+
Sbjct: 113 RLGISHNLYTYNILI-NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 424 EKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVM 483
A L+++M E G+ P + +LI+G LFL K
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHG------------LFLHNKA------------- 206
Query: 484 IKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGC 543
S+AV L + M + C+P++ TY +++G+ + G ID A++LL +ME
Sbjct: 207 ----------SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 544 VPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAAR 603
++ ++ +++ L K A+ +FT+M++ ++P+ ++Y++++ CL + +A+R
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 604 LMKDMNAKGFEYDQITYSSILEAVGK 629
L+ DM + + +T++++++A K
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVK 342
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 143/288 (49%), Gaps = 6/288 (2%)
Query: 124 NSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLS--EIVNILGKAKMVNKALS 181
N TY +LI CL + + DM+ + P+V++ +++ K + +A
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERK--INPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 182 IFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAF 241
++ ++ R P TY+S+I ++ ++ M ++ +CFP+ VTY+ LI+ F
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLINGF 410
Query: 242 GKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTV 301
K R + LF EM + GL YTTL+ +F+ + + A + ++M G +
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 302 YTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNK 361
TY L+ GL + G++E A +F + + +P I N +I + +AG++ED LF
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 362 MEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFT 409
+ KP+V+ YNT+I S F K EA A F KM+ +G LP T
Sbjct: 531 LSLKGVKPDVIIYNTMI-SGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 233/490 (47%), Gaps = 31/490 (6%)
Query: 161 SVLSEIVNILGKAKMVNKALSIFYQIKSR--KCKPTANTYNSMILMLMQEGYYEKIHELY 218
S L +V+I K+ ++KA F ++SR + KP+ YN ++ ++E E + LY
Sbjct: 76 SSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLY 135
Query: 219 NEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFK 278
+M G P T T++ LI A +A LFDEM E G +P + LV Y K
Sbjct: 136 KDMVLCG-IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCK 194
Query: 279 LGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVL 338
G +K L L+ M+ G Y ++ R GR +D+ + M +EG PDIV
Sbjct: 195 AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVT 254
Query: 339 INNLINVLGRAGRLEDALKLFNKMEALQC----KPNVVTYNTVIKSLFESKAPASEASAW 394
N+ I+ L + G++ DA ++F+ ME + +PN +TYN ++K F +A
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKG-FCKVGLLEDAKTL 313
Query: 395 FEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGK 454
FE ++ N L S +Y+I + G + + +A +L++M +KG P +Y L++G K
Sbjct: 314 FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373
Query: 455 AKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYT 514
A + +K C A Y ++ + G++ A L EM + C P+ YT
Sbjct: 374 LGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433
Query: 515 YNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQ 574
N L+ + + G I +A LLR+M E G D + NII++GL SG +A+EI M+
Sbjct: 434 CNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493
Query: 575 -----------------------HSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAK 611
+ PD ++Y+T+L L +AG F EA L +M +
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553
Query: 612 GFEYDQITYS 621
+ D + Y+
Sbjct: 554 KLQPDSVAYN 563
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 212/440 (48%), Gaps = 14/440 (3%)
Query: 204 MLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMK----E 259
+L++ +E+I EL+N + + + +++S F K A F ++ E
Sbjct: 48 ILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPE 107
Query: 260 NGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVED 319
N +P+ +Y L+ K VE L ++M G A YT+ LI+ L + V+
Sbjct: 108 N--KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165
Query: 320 AYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIK 379
A LF M ++GCKP+ L+ +AG + L+L N ME+ PN V YNT++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 380 SLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEK--- 436
S F + ++ EKM+ G++P T++ I CK +V A + +ME
Sbjct: 226 S-FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 437 GFP-PCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSD 495
G P P Y ++ G+ K E A LF ++E +S + Y + ++ + G+ +
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344
Query: 496 AVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILN 555
A + +M P +Y+YN LM G+ + GM+ DA +++ M+ +G PD ++ +L+
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404
Query: 556 GLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEY 615
G G A + +M + P+A + N +L L + G EA L++ MN KG+
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Query: 616 DQITYSSILEAV---GKVDE 632
D +T + I++ + G++D+
Sbjct: 465 DTVTCNIIVDGLCGSGELDK 484
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/555 (23%), Positives = 246/555 (44%), Gaps = 32/555 (5%)
Query: 108 KIQFFKWAGRRR---NFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLS 164
+++F W + + T+ LIR L ++ + + +M C
Sbjct: 127 RVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFG 186
Query: 165 EIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNE 224
+V KA + +K L + ++S P YN+++ +EG + ++ +M E
Sbjct: 187 ILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREE 246
Query: 225 GNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKEN---GL-QPTAKIYTTLVSIYFKLG 280
G PD VT+++ ISA K G+ + A R+F +M+ + GL +P + Y ++ + K+G
Sbjct: 247 G-LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG 305
Query: 281 EVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLIN 340
+E A L + ++ ++ +Y ++GL R G+ +A + M +G P I N
Sbjct: 306 LLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYN 365
Query: 341 NLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKA 400
L++ L + G L DA + M+ P+ VTY ++ + S A + ++M
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG-YCSVGKVDAAKSLLQEMMR 424
Query: 401 NGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEA 460
N LP+ +T +IL+ K R+ +A LL +M EKG+ +++G + +
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Query: 461 ANELFLELK------------EYCGCSSARV-----------YAVMIKHFGKCGRLSDAV 497
A E+ ++ Y G + Y+ ++ K GR ++A
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544
Query: 498 DLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGL 557
+LF EM + +PD YN + + G I A+ +L+ ME+ GC + ++N ++ GL
Sbjct: 545 NLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604
Query: 558 AKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQ 617
+ +M+ I P+ +YNT + L E+A L+ +M K +
Sbjct: 605 GIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNV 664
Query: 618 ITYSSILEAVGKVDE 632
++ ++EA KV +
Sbjct: 665 FSFKYLIEAFCKVPD 679
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 212/482 (43%), Gaps = 26/482 (5%)
Query: 172 KAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDT 231
K ++ A ++F I+ + +YN + L++ G + + + +M ++G P
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG-IGPSI 361
Query: 232 VTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQE 291
+Y+ L+ KLG A + MK NG+ P A Y L+ Y +G+V+ A L+QE
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Query: 292 MKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGR 351
M C YT L+ L + GR+ +A L M ++G D V N +++ L +G
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 481
Query: 352 LEDALKLFNKMEAL-----------------------QCKPNVVTYNTVIKSLFESKAPA 388
L+ A+++ M C P+++TY+T++ L ++ A
Sbjct: 482 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 541
Query: 389 SEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSL 448
EA F +M + P Y+I I FCK ++ A +L++ME+KG Y SL
Sbjct: 542 -EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Query: 449 INGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRC 508
I G G + + L E+KE + Y I++ + ++ DA +L +EM +
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Query: 509 KPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAME 568
P+V+++ L+ + D A + C ++++ N L +G +A E
Sbjct: 661 APNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATE 719
Query: 569 IFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVG 628
+ + + Y ++ L + E A+ ++ M +G+ +D +++ +G
Sbjct: 720 LLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLG 779
Query: 629 KV 630
K+
Sbjct: 780 KM 781
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 169/403 (41%), Gaps = 55/403 (13%)
Query: 117 RRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMV 176
+R ++ TY L+ + +Q+M+R+ C+ + +++ L K +
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHE-------------------- 216
++A + ++ + T N ++ L G +K E
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507
Query: 217 --LYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVS 274
L ++ E NC PD +TYS L++ K GR A LF EM LQP + Y +
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Query: 275 IYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKP 334
+ K G++ A ++++M+ KGC ++ TY LI GLG ++ + +GL M ++G P
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISP 627
Query: 335 DIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKS------------LF 382
+I N I L ++EDA L ++M PNV ++ +I++ +F
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Query: 383 ESKAPAS---------------------EASAWFEKMKANGVLPSPFTYSILIDGFCKTN 421
E+ +A+ E + G F Y L++ CK +
Sbjct: 688 ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKD 747
Query: 422 RVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANEL 464
+E A +L +M ++G+ PAA +I+G GK + AN
Sbjct: 748 ELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSF 790
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 197/387 (50%), Gaps = 4/387 (1%)
Query: 229 PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGL 288
PD VT+++LI+ F R A+ + ++M E G++P +YTT++ K G V AL L
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 289 VQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGR 348
+M+ G V YT L+ GL +GR DA L M K KPD++ N LI+ +
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPF 408
G+ DA +L+N+M + PN+ TY ++I F + EA F M+ G P
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLING-FCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 409 TYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL 468
Y+ LI+GFCK +V+ A + EM +KG Y +LI G+G+ + A E+F +
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 469 KEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLR---CKPDVYTYNALMSGMVRA 525
+ R Y V++ G++ A+ +F +M+K P+++TYN L+ G+
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 526 GMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSY 585
G ++ A + M + I ++ II+ G+ K+G K A+ +F + +KP+ V+Y
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 586 NTILGCLSRAGMFEEAARLMKDMNAKG 612
T++ L R G+ EA L + M G
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 233/454 (51%), Gaps = 5/454 (1%)
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
N+AL +F + + P+ + ++ ++ + ++ + L + + G D T +
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG-VSHDLYTCNL 112
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
L++ F + + A +M + G +P +T+L++ + +E+A+ +V +M G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
V YT +I L + G V A LF M G +PD+V+ +L+N L +GR DA
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
L M + KP+V+T+N +I + F + +A + +M + P+ FTY+ LI+G
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDA-FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSS 476
FC V++A + ME KG P AY SLING+ K K+ + A ++F E+ + +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 477 ARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
Y +I+ FG+ G+ + A ++F+ M P++ TYN L+ + G + A +
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 537 RM---EEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLS 593
M E DG P+I ++N++L+GL +G ++A+ +F M+ E+ ++Y I+ +
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 594 RAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
+AG + A L + +KG + + +TY++++ +
Sbjct: 472 KAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 160/327 (48%), Gaps = 1/327 (0%)
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKME 363
Y E+++ + + +A LF +M++ P I+ L+NV+ + + + + L + ++
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 364 ALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRV 423
+ ++ T N ++ +S P AS++ KM G P T++ LI+GFC NR+
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYL-ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 424 EKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVM 483
E+A ++ +M E G P Y ++I+ K A LF +++ Y +Y +
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 484 IKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGC 543
+ GR DA L M K + KPDV T+NAL+ V+ G DA L M
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 544 VPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAAR 603
P+I ++ ++NG G A ++F M+ PD V+Y +++ + ++A +
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 604 LMKDMNAKGFEYDQITYSSILEAVGKV 630
+ +M+ KG + ITY+++++ G+V
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQV 365
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 231/458 (50%), Gaps = 6/458 (1%)
Query: 176 VNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYS 235
++ A ++F ++ + P TYN +I G + L+++M +G C P+ VTY+
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG-CLPNVVTYN 244
Query: 236 ALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGK 295
LI + KL + +L M GL+P Y +++ + G +++ ++ EM +
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 296 GCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDA 355
G +L TY LIKG + G A + ML+ G P ++ +LI+ + +AG + A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 356 LKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILID 415
++ ++M PN TY T++ F K +EA +M NG PS TY+ LI+
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDG-FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 416 GFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCS 475
G C T ++E A +LE+M+EKG P +Y ++++G+ ++ + A + E+ E
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 476 SARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLL 535
Y+ +I+ F + R +A DL+ EM ++ PD +TY AL++ G ++ A L
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 536 RRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRA 595
M E G +PD+ ++++++NGL K + A + K+ + E P V+Y+T++ S
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 596 GMFEEAARLMKDMNAKGF--EYDQITYSSILEAVGKVD 631
F+ L+K KG E DQ+ + S+L K D
Sbjct: 604 E-FKSVVSLIKGFCMKGMMTEADQV-FESMLGKNHKPD 639
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 237/491 (48%), Gaps = 4/491 (0%)
Query: 142 GVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSM 201
+++KS+Q+ C SV +V + +++KALSI + ++ P +YN++
Sbjct: 117 SLVFKSLQE-TYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAV 175
Query: 202 ILMLMQEGYYEKIHE-LYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKEN 260
+ ++ E ++ EM E P+ TY+ LI F G A+ LFD+M+
Sbjct: 176 LDATIRSKRNISFAENVFKEML-ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK 234
Query: 261 GLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDA 320
G P Y TL+ Y KL +++ L++ M KG + +Y +I GL R GR+++
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 321 YGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKS 380
+ M + G D V N LI + G AL + +M P+V+TY ++I S
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 381 LFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPP 440
+ ++ + A + ++M+ G+ P+ TY+ L+DGF + + +A+ +L EM + GF P
Sbjct: 355 MCKA-GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Query: 441 CPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLF 500
Y +LING+ + E A + ++KE Y+ ++ F + + +A+ +
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 501 NEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKS 560
EM + KPD TY++L+ G +A L M G PD ++ ++N
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 561 GGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITY 620
G ++A+++ +M + PD V+Y+ ++ L++ EA RL+ + + +TY
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 621 SSILEAVGKVD 631
+++E ++
Sbjct: 594 HTLIENCSNIE 604
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/584 (25%), Positives = 269/584 (46%), Gaps = 38/584 (6%)
Query: 68 RILKIFKWGPD----AEKALEVLKMRVDHRLVHQVLNIDVEIN------------VKIQF 111
R L F P A+KAL LK R ++L H N E + ++F
Sbjct: 10 RSLSTFASSPSDSLLADKALTFLK-RHPYQLHHLSANFTPEAASNLLLKSQNDQALILKF 68
Query: 112 FKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILG 171
WA + F +RC T I +K + ++ ++ V ++ ++
Sbjct: 69 LNWANPHQFFT---------LRCKCITLHILTKFK----LYKTAQILAEDVAAKTLDD-E 114
Query: 172 KAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDT 231
A +V K+L Y + C T++ ++ ++ + +K + + + P
Sbjct: 115 YASLVFKSLQETYDL----CYSTSSVFDLVVKSYSRLSLIDKALSIVH-LAQAHGFMPGV 169
Query: 232 VTYSALISAFGKLGRDIS-AIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQ 290
++Y+A++ A + R+IS A +F EM E+ + P Y L+ + G ++ AL L
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 291 EMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAG 350
+M+ KGC V TY LI G + +++D + L +M +G +P+++ N +IN L R G
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 351 RLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTY 410
R+++ + +M + VTYNT+IK + + +A +M +G+ PS TY
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKG-YCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 411 SILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKE 470
+ LI CK + +A L++M +G P Y +L++G+ + A + E+ +
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 471 YCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDD 530
S Y +I G++ DA+ + +MK+ PDV +Y+ ++SG R+ +D+
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 531 AYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILG 590
A + R M E G PD +++ ++ G + K A +++ +M + PD +Y ++
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 591 CLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDEDR 634
G E+A +L +M KG D +TYS ++ + K R
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 237/509 (46%), Gaps = 25/509 (4%)
Query: 124 NSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMG--PSVLSE--IVNILGKAKMVNKA 179
N TY LI + R I +K ++RS + G P+++S ++N L + + +
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFK----LLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 180 LSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALIS 239
+ ++ R TYN++I +EG + + ++ EM G P +TY++LI
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG-LTPSVITYTSLIH 353
Query: 240 AFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCAL 299
+ K G A+ D+M+ GL P + YTTLV + + G + +A +++EM G +
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Query: 300 TVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLF 359
+V TY LI G G++EDA + +M ++G PD+V + +++ R+ +++AL++
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 360 NKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCK 419
+M KP+ +TY+++I+ E + EA +E+M G+ P FTY+ LI+ +C
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRR-TKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 420 TNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL----------- 468
+EKA L EM EKG P Y LING K R A L L+L
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 469 ----KEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVR 524
E C + +IK F G +++A +F M KPD YN ++ G R
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 525 AGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVS 584
AG I AY+L + M + G + + ++ L K G + + S +A
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQ 712
Query: 585 YNTILGCLSRAGMFEEAARLMKDMNAKGF 613
++ R G + ++ +M GF
Sbjct: 713 AKVLVEINHREGNMDVVLDVLAEMAKDGF 741
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 198/451 (43%), Gaps = 58/451 (12%)
Query: 108 KIQFFKWAGRRRNFEHNSTTYMALIR--CLDETRMIGVMWKSIQDMVRSTCVMGPSVLS- 164
++ F RR + + TY LI+ C + ++ + +M+R + PSV++
Sbjct: 293 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA--EMLRHG--LTPSVITY 348
Query: 165 -EIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGY----YEKIHEL-- 217
+++ + KA +N+A+ Q++ R P TY +++ Q+GY Y + E+
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 218 ---------YNEMCNEGNCF--------------------PDTVTYSALISAFGKLGRDI 248
YN + N G+C PD V+YS ++S F +
Sbjct: 409 NGFSPSVVTYNALIN-GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 249 SAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELI 308
A+R+ EM E G++P Y++L+ + + ++A L +EM G +TYT LI
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 309 KGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCK 368
G +E A L M+++G PD+V + LIN L + R +A +L K+ +
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 369 PNVVTYNTVIKSL--------------FESKAPASEASAWFEKMKANGVLPSPFTYSILI 414
P+ VTY+T+I++ F K +EA FE M P Y+I+I
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Query: 415 DGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGC 474
G C+ + KA+ L +EM + GF +L+ K + N + + + C
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707
Query: 475 SSARVYAVMIKHFGKCGRLSDAVDLFNEMKK 505
S A V+++ + G + +D+ EM K
Sbjct: 708 SEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 192/396 (48%), Gaps = 36/396 (9%)
Query: 229 PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGL 288
PD Y+ALI+ F K+ R A R+ D M+ P Y ++ G+++ AL +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 289 VQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGR 348
+ ++ C TV TYT LI+ G V++A L ML G KPD+ N +I + +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPF 408
G ++ A ++ +E C+P+V++YN ++++L ++ E KM + P+
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALL-NQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 409 TYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL 468
TYSILI C+ ++E+A LL+ M+EKG P
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTP---------------------------- 366
Query: 469 KEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMI 528
A Y +I F + GRL A++ M C PD+ YN +++ + + G
Sbjct: 367 -------DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 529 DDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTI 588
D A + ++ E GC P+ +S+N + + L SG RA+ + +M + I PD ++YN++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 589 LGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSIL 624
+ CL R GM +EA L+ DM + F +TY+ +L
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 205/392 (52%), Gaps = 7/392 (1%)
Query: 245 GRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTY 304
G I ++ L + M G P + T L+ +F L + KA+ +++ ++ G V+ Y
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-DVFAY 161
Query: 305 TELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEA 364
LI G + R++DA + M + PD V N +I L G+L+ ALK+ N++ +
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 365 LQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVE 424
C+P V+TY +I++ + EA ++M + G+ P FTY+ +I G CK V+
Sbjct: 222 DNCQPTVITYTILIEATM-LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 425 KAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL-KEYCGCSSARVYAVM 483
+A ++ +E KG P +Y L+ ++E +L ++ E C + Y+++
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD-PNVVTYSIL 339
Query: 484 IKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGC 543
I + G++ +A++L MK+ PD Y+Y+ L++ R G +D A L M DGC
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 544 VPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAAR 603
+PDI ++N +L L K+G +A+EIF K+ P++ SYNT+ L +G A
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 604 LMKDMNAKGFEYDQITYSSILEAV---GKVDE 632
++ +M + G + D+ITY+S++ + G VDE
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 196/381 (51%), Gaps = 3/381 (0%)
Query: 229 PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGL 288
PDTVTY+ +I + G+ A+++ +++ + QPT YT L+ G V++AL L
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 289 VQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGR 348
+ EM +G ++TY +I+G+ + G V+ A+ + N+ +GC+PD++ N L+ L
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPF 408
G+ E+ KL KM + +C PNVVTY+ +I +L EA + MK G+ P +
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRD-GKIEEAMNLLKLMKEKGLTPDAY 369
Query: 409 TYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL 468
+Y LI FC+ R++ A LE M G P Y +++ K + + A E+F +L
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 469 KEYCGCS-SARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
E GCS ++ Y M G A+ + EM PD TYN+++S + R GM
Sbjct: 430 GE-VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
+D+A+ LL M P + ++NI+L G K+ + A+ + M + +P+ +Y
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 548
Query: 588 ILGCLSRAGMFEEAARLMKDM 608
++ + AG EA L D+
Sbjct: 549 LIEGIGFAGYRAEAMELANDL 569
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 5/287 (1%)
Query: 348 RAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSP 407
R+G ++L L M P+V+ +IK F + +A E ++ G P
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN-IPKAVRVMEILEKFGQ-PDV 158
Query: 408 FTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLE 467
F Y+ LI+GFCK NR++ A +L+ M K F P Y +I + + A ++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 468 LKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
L + Y ++I+ G + +A+ L +EM KPD++TYN ++ GM + GM
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
+D A+ ++R +E GC PD+ S+NI+L L G + ++ TKM + P+ V+Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV---GKVD 631
++ L R G EEA L+K M KG D +Y ++ A G++D
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 117 RRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMV 176
+ + ++ +Y LI + V + ++ M+ C+ + ++ L K
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYN--EMCNEGNCFPDTVTY 234
++AL IF ++ C P +++YN+M L G +KI L+ EM + G PD +TY
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG--DKIRALHMILEMMSNG-IDPDEITY 476
Query: 235 SALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKG 294
+++IS + G A L +M+ P+ Y ++ + K +E A+ +++ M G
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 295 KGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLK 329
GC TYT LI+G+G AG +A L ++++
Sbjct: 537 NGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 214/423 (50%), Gaps = 7/423 (1%)
Query: 160 PSVL--SEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHEL 217
PS++ S++++ + K+K + +S+F+ ++ +YN +I L + + +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 218 YNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYF 277
+M G PD VT S+LI+ F + R AI L +M+E G +P IY T++
Sbjct: 127 VGKMMKFGY-EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 278 KLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIV 337
K+G V A+ L M+ G TY L+ GL +GR DA L +M+ P+++
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 338 LINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEK 397
+I+V + G+ +A+KL+ +M P+V TYN++I L EA +
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC-MHGRVDEAKQMLDL 304
Query: 398 MKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKR 457
M G LP TY+ LI+GFCK+ RV++ L EM ++G Y ++I GY +A R
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 458 YEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNA 517
+AA E+F + + R Y++++ R+ A+ LF M+K + D+ TYN
Sbjct: 365 PDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 518 LMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSE 577
++ GM + G ++DA+ L R + G PD+ S+ +++G + ++ ++ KMQ
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 578 IKP 580
+ P
Sbjct: 482 LLP 484
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 221/436 (50%), Gaps = 9/436 (2%)
Query: 180 LSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYN--EMCNEGNCFPDTVTYSAL 237
+ +F ++ + P+ ++ ++ + + Y+ + L++ E+C G+ D +Y+ +
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGH---DLYSYNIV 110
Query: 238 ISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGC 297
I+ + R + A+ + +M + G +P ++L++ + + V A+ LV +M+ G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 298 ALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALK 357
V Y +I G + G V DA LF M ++G + D V N+L+ L +GR DA +
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 358 LFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGF 417
L M PNV+T+ VI +F + SEA +E+M V P FTY+ LI+G
Sbjct: 231 LMRDMVMRDIVPNVITFTAVI-DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 418 CKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSA 477
C RV++A +L+ M KG P Y +LING+ K+KR + +LF E+ +
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 478 RVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRR 537
Y +I+ + + GR A ++F+ M +P++ TY+ L+ G+ ++ A L
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 538 MEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGM 597
M++ DI ++NI+++G+ K G + A ++F + +KPD VSY T++ R
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 598 FEEAARLMKDMNAKGF 613
++++ L + M G
Sbjct: 467 WDKSDLLYRKMQEDGL 482
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 199/400 (49%), Gaps = 6/400 (1%)
Query: 228 FPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALG 287
P V +S ++S K I LF M+ G+ Y +++ + AL
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 288 LVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLG 347
+V +M G V T + LI G + RV DA L M + G +PD+V+ N +I+
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 348 RAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSP 407
+ G + DA++LF++ME + + VTYN+++ L S S+A+ M ++P+
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS-GRWSDAARLMRDMVMRDIVPNV 244
Query: 408 FTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLE 467
T++ +ID F K + +A L EEM + P Y SLING R + A ++ L+
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM-LD 303
Query: 468 LKEYCGCSSARV-YAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAG 526
L GC V Y +I F K R+ + LF EM + D TYN ++ G +AG
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 527 MIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYN 586
D A + RM+ P+I +++I+L GL + ++A+ +F MQ SEI+ D +YN
Sbjct: 364 RPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 587 TILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
++ + + G E+A L + ++ KG + D ++Y++++
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 198/423 (46%), Gaps = 40/423 (9%)
Query: 123 HNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSI 182
H+ +Y +I CL + + M++ +S ++N + V A+ +
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 183 FYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFG 242
+++ +P YN++I + G EL++ M +G D VTY++L++
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG-VRADAVTYNSLVAGLC 220
Query: 243 KLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVY 302
GR A RL +M + P +T ++ ++ K G+ +A+ L +EM + V+
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 303 TYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKM 362
TY LI GL GRV++A + M+ +GC PD+V N LIN ++ R+++ KLF +M
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 363 EALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNR 422
+ +TYNT+I+ F++ P + A F +M + P+ TYSIL+ G C R
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDA-AQEIFSRMDSR---PNIRTYSILLYGLCMNWR 396
Query: 423 VEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAV 482
VEKA +L E M++ +E+ L++ Y +
Sbjct: 397 VEKALVLFENMQK--------------------------SEIELDIT---------TYNI 421
Query: 483 MIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDG 542
+I K G + DA DLF + KPDV +Y ++SG R D + L R+M+EDG
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 543 CVP 545
+P
Sbjct: 482 LLP 484
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 1/310 (0%)
Query: 317 VEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNT 376
+E+ LF M++ P IV + +++ + ++ + + LF+ ME ++ +YN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 377 VIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEK 436
VI L S KM G P T S LI+GFC+ NRV A L+ +MEE
Sbjct: 110 VINCLCRCSRFVIALSV-VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 437 GFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDA 496
GF P Y ++I+G K A ELF ++ + A Y ++ GR SDA
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 497 VDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNG 556
L +M P+V T+ A++ V+ G +A L M PD+ ++N ++NG
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 557 LAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYD 616
L G A ++ M PD V+YNT++ ++ +E +L ++M +G D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 617 QITYSSILEA 626
ITY++I++
Sbjct: 349 TITYNTIIQG 358
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 149/284 (52%), Gaps = 4/284 (1%)
Query: 352 LEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYS 411
LE+ + LF KM + P++V ++ V+ + +SK + F M+ G+ ++Y+
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKN-YDLVISLFHHMEVCGIGHDLYSYN 108
Query: 412 ILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEY 471
I+I+ C+ +R A ++ +M + G+ P SLING+ + R A +L +++E
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 472 CGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDA 531
+Y +I K G ++DAV+LF+ M++ + D TYN+L++G+ +G DA
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 532 YSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGC 591
L+R M VP++ + +++ K G AM+++ +M + PD +YN+++
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 592 LSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK---VDE 632
L G +EA +++ M KG D +TY++++ K VDE
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 8/247 (3%)
Query: 119 RNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLS--EIVNILGKAKMV 176
R+ N T+ A+I + K ++M R CV P V + ++N L V
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR-CV-DPDVFTYNSLINGLCMHGRV 295
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
++A + + ++ C P TYN++I + ++ +L+ EM G DT+TY+
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG-LVGDTITYNT 354
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
+I + + GR +A +F M +P + Y+ L+ VEKAL L + M+
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
L + TY +I G+ + G VEDA+ LF ++ +G KPD+V +I+ R + + +
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSD 471
Query: 357 KLFNKME 363
L+ KM+
Sbjct: 472 LLYRKMQ 478
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 239/507 (47%), Gaps = 12/507 (2%)
Query: 127 TYMALI----RCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKA--L 180
TY ALI R D + + ++ K QD +S V S ++ L ++ ++ L
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVN----YSLVIQSLTRSNKIDSVMLL 254
Query: 181 SIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISA 240
++ +I+ K + N +I+ + G K +L M T T ++ISA
Sbjct: 255 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLG-MAQATGLSAKTATLVSIISA 313
Query: 241 FGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALT 300
GR + A LF+E++++G++P + Y L+ Y K G ++ A +V EM+ +G +
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 301 VYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFN 360
+TY+ LI AGR E A + M +P+ + + L+ G + ++
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 361 KMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKT 420
+M+++ KP+ YN VI + F A F++M + G+ P T++ LID CK
Sbjct: 434 EMKSIGVKPDRQFYNVVIDT-FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKH 492
Query: 421 NRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVY 480
R A + E ME +G PC Y +IN YG +R++ L ++K + +
Sbjct: 493 GRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH 552
Query: 481 AVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEE 540
++ +GK GR +DA++ EMK + KP YNAL++ + G+ + A + R M
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS 612
Query: 541 DGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEE 600
DG P + + N ++N + A + M+ + +KPD V+Y T++ L R F++
Sbjct: 613 DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Query: 601 AARLMKDMNAKGFEYDQITYSSILEAV 627
+ ++M G + D+ S + A+
Sbjct: 673 VPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 215/479 (44%), Gaps = 6/479 (1%)
Query: 157 VMGPSVLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIH- 215
+ P + ++ + + KAL++ +++ + Y+ +I L + + +
Sbjct: 194 TLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVML 253
Query: 216 -ELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVS 274
LY E+ D + +I F K G A++L + GL +++S
Sbjct: 254 LRLYKEI-ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 275 IYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKP 334
G +A L +E++ G Y L+KG + G ++DA + M K G P
Sbjct: 313 ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSP 372
Query: 335 DIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAW 394
D + LI+ AGR E A + +MEA +PN ++ ++ F + +
Sbjct: 373 DEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG-FRDRGEWQKTFQV 431
Query: 395 FEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGK 454
++MK+ GV P Y+++ID F K N ++ A + M +G P + +LI+ + K
Sbjct: 432 LKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCK 491
Query: 455 AKRYEAANELFLELKEYCGC-SSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVY 513
R+ A E+F E E GC A Y +MI +G R D L +MK P+V
Sbjct: 492 HGRHIVAEEMF-EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 514 TYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKM 573
T+ L+ ++G +DA L M+ G P +N ++N A+ G ++A+ F M
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 610
Query: 574 QHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDE 632
+KP ++ N+++ EA +++ M G + D +TY+++++A+ +VD+
Sbjct: 611 TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 195/405 (48%), Gaps = 8/405 (1%)
Query: 227 CFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKAL 286
CF + YS LI A G+ + A L ++ L P Y L+ + ++EKAL
Sbjct: 163 CFSYELLYSILIHALGRSEKLYEAFLL---SQKQTLTPLT--YNALIGACARNNDIEKAL 217
Query: 287 GLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDA--YGLFMNMLKEGCKPDIVLINNLIN 344
L+ +M+ G Y+ +I+ L R+ +++ L+ + ++ + D+ L+N++I
Sbjct: 218 NLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIM 277
Query: 345 VLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVL 404
++G AL+L +A T ++I +L +S EA A FE+++ +G+
Sbjct: 278 GFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS-GRTLEAEALFEELRQSGIK 336
Query: 405 PSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANEL 464
P Y+ L+ G+ KT ++ A ++ EME++G P Y LI+ Y A R+E+A +
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 396
Query: 465 FLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVR 524
E++ ++ V++ ++ F G + EMK + KPD YN ++ +
Sbjct: 397 LKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 456
Query: 525 AGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVS 584
+D A + RM +G PD + N +++ K G A E+F M+ P A +
Sbjct: 457 FNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 585 YNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
YN ++ +++ RL+ M ++G + +T++++++ GK
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 224/474 (47%), Gaps = 14/474 (2%)
Query: 164 SEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCN 223
S +++ LG+++ + +A + S+K T TYN++I + EK L +M
Sbjct: 171 SILIHALGRSEKLYEAF-----LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 224 EGNCFPDTVTYSALISAFGKLGR--DISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGE 281
+G D V YS +I + + + + +RL+ E++ + L+ ++ ++ + K G+
Sbjct: 226 DGYQ-SDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 282 VEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINN 341
KAL L+ + G + T +I L +GR +A LF + + G KP N
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 342 LINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKAN 401
L+ + G L+DA + ++ME P+ TY+ +I + + + A ++M+A
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA-YVNAGRWESARIVLKEMEAG 403
Query: 402 GVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAA 461
V P+ F +S L+ GF +K +L+EM+ G P Y +I+ +GK + A
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 462 NELFLELKEYCGCSSARV-YAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMS 520
F + G RV + +I K GR A ++F M++ C P TYN +++
Sbjct: 464 MTTFDRMLSE-GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 521 GMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKP 580
DD LL +M+ G +P++ +H +++ KSG A+E +M+ +KP
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 581 DAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDEDR 634
+ YN ++ ++ G+ E+A + M + G + + +S++ A G EDR
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG---EDR 633
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 240/511 (46%), Gaps = 2/511 (0%)
Query: 117 RRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMV 176
R R S Y +LI R + ++ M M S IV KA
Sbjct: 336 RARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHA 395
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
A F + K A+ Y +I Q E+ L EM EG P + Y
Sbjct: 396 EAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAI-YHT 454
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
++ + + + + +F +KE G PT Y L+++Y K+G++ KAL + + MK +G
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
+ TY+ +I G + +A+ +F +M+KEG KPD++L NN+I+ G ++ A+
Sbjct: 515 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
+ +M+ L+ +P T+ +I +S + F+ M+ G +P+ T++ LI+G
Sbjct: 575 QTVKEMQKLRHRPTTRTFMPIIHGYAKS-GDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSS 476
+ ++EKA +L+EM G Y ++ GY A E F L+
Sbjct: 634 LVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Query: 477 ARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
Y ++K K GR+ A+ + EM + + YN L+ G R G + +A L++
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 537 RMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAG 596
+M+++G PDI+++ ++ +K+G RA + +M+ +KP+ +Y T++ +RA
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Query: 597 MFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
+ E+A ++M A G + D+ Y +L ++
Sbjct: 814 LPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 227/504 (45%), Gaps = 7/504 (1%)
Query: 130 ALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIKSR 189
+L R LD G W+++ + +V G+ +++A F ++++R
Sbjct: 282 SLQRILDTN---GDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRAR 338
Query: 190 KCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDIS 249
PT+ Y S+I ++ +M EG VTYS ++ F K G +
Sbjct: 339 GITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEM-SLVTYSVIVGGFSKAGHAEA 397
Query: 250 AIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIK 309
A FDE K A IY ++ + + +E+A LV+EM+ +G + Y ++
Sbjct: 398 ADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMD 457
Query: 310 GLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKP 369
G + +F + + G P +V LIN+ + G++ AL++ M+ K
Sbjct: 458 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 370 NVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLL 429
N+ TY+ +I + K A+ A A FE M G+ P Y+ +I FC +++A
Sbjct: 518 NLKTYSMMINGFVKLKDWAN-AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQT 576
Query: 430 LEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGC-SSARVYAVMIKHFG 488
++EM++ P + +I+GY K+ + E+F ++ CGC + + +I
Sbjct: 577 VKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF-DMMRRCGCVPTVHTFNGLINGLV 635
Query: 489 KCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDIN 548
+ ++ AV++ +EM + +TY +M G G A+ R++ +G DI
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 549 SHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDM 608
++ +L KSG + A+ + +M I ++ YN ++ +R G EAA L++ M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 609 NAKGFEYDQITYSSILEAVGKVDE 632
+G + D TY+S + A K +
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGD 779
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 207/450 (46%), Gaps = 19/450 (4%)
Query: 156 CVMGPSVLSE--IVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEK 213
C P+V++ ++N+ K ++KAL + +K K TY+ MI ++ +
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 214 IHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLV 273
++ +M EG PD + Y+ +ISAF +G AI+ EM++ +PT + + ++
Sbjct: 538 AFAVFEDMVKEG-MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 274 SIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCK 333
Y K G++ ++L + M+ GC TV+T+ LI GL ++E A + M G
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 334 PDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASA 393
+ ++ G A + F +++ ++ TY ++K+ +S S A A
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS-ALA 715
Query: 394 WFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYG 453
++M A + + F Y+ILIDG+ + V +A L+++M+++G P Y S I+
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 454 KAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVY 513
KA A + E++ + + Y +IK + + A+ + EMK + KPD
Sbjct: 776 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKA 835
Query: 514 TYNALMSGMVRAGMIDDAY------SLLRRMEEDGCVPDINS---HNIILNGLAKSGGPK 564
Y+ L++ ++ I +AY ++ + M E G + D+ + + L + SGG
Sbjct: 836 VYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGE- 894
Query: 565 RAMEIFTKMQHSEIKPDAVSYNTILGCLSR 594
T+ PD S++ G L +
Sbjct: 895 -----LTETLQKTFPPDWSSHHHHHGFLDQ 919
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 166/372 (44%), Gaps = 16/372 (4%)
Query: 81 KALEVLKMRVDHRLVHQVLNIDVEINVKIQFFKWAGRRRNFEH--------NSTTYMALI 132
KALEV ++ + + H + + IN ++ WA FE + Y +I
Sbjct: 502 KALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 133 RCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQIKSRKCK 192
+ +++++M + I++ K+ + ++L +F ++ C
Sbjct: 562 SAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 193 PTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIR 252
PT +T+N +I L+++ EK E+ +EM G + TY+ ++ + +G A
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG-VSANEHTYTKIMQGYASVGDTGKAFE 680
Query: 253 LFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLG 312
F ++ GL Y L+ K G ++ AL + +EM + + Y LI G
Sbjct: 681 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 740
Query: 313 RAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVV 372
R G V +A L M KEG KPDI + I+ +AG + A + +MEAL KPN+
Sbjct: 741 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 800
Query: 373 TYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHL---- 428
TY T+IK + P +A + +E+MKA G+ P Y L+ + +A++
Sbjct: 801 TYTTLIKGWARASLP-EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGV 859
Query: 429 --LLEEMEEKGF 438
+ +EM E G
Sbjct: 860 MTICKEMVEAGL 871
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 135/328 (41%), Gaps = 36/328 (10%)
Query: 307 LIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQ 366
++K GR G + A F M G P + +LI+ +++AL KM+
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 367 CKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKA 426
+ ++VTY+ ++ F A A WF++ K + Y +I C+T +E+A
Sbjct: 375 IEMSLVTYSVIVGG-FSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 433
Query: 427 HLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKH 486
L+ EMEE+G A Y ++++GY + +F LKE CG +
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE-CGFT----------- 481
Query: 487 FGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPD 546
P V TY L++ + G I A + R M+E+G +
Sbjct: 482 -----------------------PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHN 518
Query: 547 INSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMK 606
+ ++++++NG K A +F M +KPD + YN I+ G + A + +K
Sbjct: 519 LKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVK 578
Query: 607 DMNAKGFEYDQITYSSILEAVGKVDEDR 634
+M T+ I+ K + R
Sbjct: 579 EMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 109/241 (45%), Gaps = 4/241 (1%)
Query: 395 FEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGK 454
FEK+ PS + +++ + + + +A E M +G P Y SLI+ Y
Sbjct: 301 FEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAV 356
Query: 455 AKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYT 514
+ + A ++KE S Y+V++ F K G A F+E K++ +
Sbjct: 357 GRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASI 416
Query: 515 YNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQ 574
Y ++ + ++ A +L+R MEE+G I ++ +++G K+ + +F +++
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 575 HSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDEDR 634
P V+Y ++ ++ G +A + + M +G +++ TYS ++ K+ +
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 635 N 635
N
Sbjct: 537 N 537
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/565 (24%), Positives = 266/565 (47%), Gaps = 40/565 (7%)
Query: 102 DVEINVKIQFFKW--AGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMG 159
DVEI VK+ F W + ++ F N + ++ L R+ + + ++ +
Sbjct: 76 DVEIGVKL--FDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLT 133
Query: 160 PSVLSEIVNILGKAKMVNKALSIF-YQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELY 218
LS +++ ++ ++KA+ I+ Y ++ P NS++ +L++ ++Y
Sbjct: 134 HEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVY 193
Query: 219 NEMCNEGN----------------------------------CFPDTVTYSALISAFGKL 244
+EMC+ G+ C P+ V Y+ +I + KL
Sbjct: 194 DEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253
Query: 245 GRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTY 304
G +A +F E+K G PT + + T+++ + K G+ + L+ E+K +G ++V+
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 305 TELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEA 364
+I R G D ++ CKPD+ N LIN L + G+ E A+ ++
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 365 LQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVE 424
PN ++Y +I++ +SK AS +M G P TY ILI G + ++
Sbjct: 374 KGLIPNNLSYAPLIQAYCKSKE-YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 425 KAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMI 484
A + ++ ++G P A Y L++G K R+ A LF E+ + A VYA +I
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 485 KHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCV 544
F + G +A +F+ + K DV +NA++ G R+GM+D+A + + RM E+ V
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552
Query: 545 PDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARL 604
PD +++ I++G K A++IF M+ ++ KP+ V+Y +++ G F+ A
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612
Query: 605 MKDMNAKGFEYDQITYSSILEAVGK 629
K+M + + +TY++++ ++ K
Sbjct: 613 FKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 213/512 (41%), Gaps = 53/512 (10%)
Query: 176 VNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG---------- 225
+ A +F ++K + PT T+ +MI +EG + L +E+ G
Sbjct: 256 IENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNN 315
Query: 226 ------------------------NCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENG 261
+C PD TY+ LI+ K G+ A+ DE + G
Sbjct: 316 IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKG 375
Query: 262 LQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAY 321
L P Y L+ Y K E + A L+ +M +GC + TY LI GL +G ++DA
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435
Query: 322 GLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSL 381
+ + ++ G PD + N L++ L + GR A LF++M P+ Y T+I
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 382 FESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPC 441
S EA F GV ++ +I GFC++ +++A + M E+ P
Sbjct: 496 IRS-GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPD 554
Query: 442 PAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFN 501
Y ++I+GY K + A ++F +++ + Y +I F G A + F
Sbjct: 555 KFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
Query: 502 EMKKLRCKPDVYTYNALMSGMVR-AGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAK- 559
EM+ P+V TY L+ + + + ++ A M + CVP+ + N +L G K
Sbjct: 615 EMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Query: 560 -------------SGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMK 606
G E F +M+ A +YN+ L CL GM + A
Sbjct: 675 TSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQD 734
Query: 607 DMNAKGFEYDQITYSSILEA---VGKVDEDRN 635
M KGF D +++++IL VG + RN
Sbjct: 735 KMVKKGFSPDPVSFAAILHGFCVVGNSKQWRN 766
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 155/374 (41%), Gaps = 88/374 (23%)
Query: 172 KAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDT 231
K+K + A + Q+ R CKP TY +I L+ G+ + + ++ + G PD
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG-VSPDA 450
Query: 232 VTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQE 291
Y+ L+S K GR + A LF EM + + P A +Y TL+ + + G+ ++A +
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510
Query: 292 MKGKGCALTVYTYTELIKGLGRAGRVEDAYG----------------------------- 322
KG + V + +IKG R+G +++A
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570
Query: 323 ------LFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNT 376
+F M K CKP++V +LIN G + A + F +M+ PNVVTY T
Sbjct: 571 MATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTT 630
Query: 377 VIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGF------------------- 417
+I+SL + + +A ++E M N +P+ T++ L+ GF
Sbjct: 631 LIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQ 690
Query: 418 ------------------------------CKTNRVEKAHLLLEEMEEKGFPPCPAAYCS 447
C V+ A + ++M +KGF P P ++ +
Sbjct: 691 SSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAA 750
Query: 448 LINGY---GKAKRY 458
+++G+ G +K++
Sbjct: 751 ILHGFCVVGNSKQW 764
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 134/317 (42%), Gaps = 40/317 (12%)
Query: 317 VEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKM-EALQCKPNVVTYN 375
+ED G N+ E K ++++++ +G L A+++++ + E P+V+ N
Sbjct: 118 IEDVLG---NLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACN 174
Query: 376 TVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEE 435
+++ L +S+ +A +++M G ++ IL+ G C +VE L+E
Sbjct: 175 SLLSLLVKSRR-LGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWG 233
Query: 436 KGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSD 495
KG P Y ++I GY C K G + +
Sbjct: 234 KGCIPNIVFYNTIIGGY---------------------C--------------KLGDIEN 258
Query: 496 AVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILN 555
A +F E+K P + T+ +++G + G + LL ++E G + N I++
Sbjct: 259 AYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318
Query: 556 GLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEY 615
+ G E + ++ KPD +YN ++ L + G E A + + + KG
Sbjct: 319 AKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIP 378
Query: 616 DQITYSSILEAVGKVDE 632
+ ++Y+ +++A K E
Sbjct: 379 NNLSYAPLIQAYCKSKE 395
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 224/485 (46%), Gaps = 39/485 (8%)
Query: 178 KALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSAL 237
KA+S+ +++ P +YN++I + EK EL NEM G C VT+ L
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG-CSWSLVTWGIL 218
Query: 238 ISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGC 297
I AF K G+ A+ EMK GL+ +YT+L+ + GE+++ L E+ +G
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 298 ALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALK 357
+ TY LI+G + G++++A +F M++ G +P++ LI+ L G+ ++AL+
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 358 LFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGF 417
L N M +PN VTYN +I L + A +A E MK P TY+IL+ G
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVA-DAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 418 CKTNRVEKAHLLLEEM--EEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCS 475
C +++A LL M + P +Y +LI+G K R A +++ L E G
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 476 -----------------------------------SARVYAVMIKHFGKCGRLSDAVDLF 500
++ Y MI F K G L+ A L
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 501 NEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKS 560
+M+ +P V+ YN L+S + + G +D A+ L M+ D PD+ S NI+++G K+
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 561 GGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITY 620
G K A + M + + PD +Y+ ++ + G +EA M GFE D
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 621 SSILE 625
S+L+
Sbjct: 638 DSVLK 642
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 247/548 (45%), Gaps = 45/548 (8%)
Query: 118 RRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILG--KAKM 175
+R F N + L++ L G +++M R++ + P V S I G + K
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM--PDVFSYNTVIRGFCEGKE 192
Query: 176 VNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYS 235
+ KAL + ++K C + T+ +I + G ++ EM G D V Y+
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG-LEADLVVYT 251
Query: 236 ALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGK 295
+LI F G LFDE+ E G P A Y TL+ + KLG++++A + + M +
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 296 GCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDA 355
G VYTYT LI GL G+ ++A L M+++ +P+ V N +IN L + G + DA
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 356 LKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSP--FTYSIL 413
+++ M+ + +P+ +TYN ++ L +K EAS M + P +Y+ L
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLC-AKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 414 IDGFCKTNR-----------------------------------VEKAHLLLEEMEEKGF 438
I G CK NR V KA L +++ +
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 439 PPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVD 498
Y ++I+G+ K A L +++ S Y ++ K G L A
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 499 LFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLA 558
LF EM++ PDV ++N ++ G ++AG I A SLL M G PD+ +++ ++N
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Query: 559 KSGGPKRAMEIFTKMQHSEIKPDAVSYNTILG-CLSRAGMFEEAARLMKDMNAKGFEYDQ 617
K G A+ F KM S +PDA +++L C+S+ G ++ L+K + K D+
Sbjct: 611 KLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ-GETDKLTELVKKLVDKDIVLDK 669
Query: 618 ITYSSILE 625
++++
Sbjct: 670 ELTCTVMD 677
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 182/382 (47%), Gaps = 3/382 (0%)
Query: 250 AIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIK 309
A+ L EM+ N L P Y T++ + + E+EKAL L EMKG GC+ ++ T+ LI
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 310 GLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKP 369
+AG++++A G M G + D+V+ +LI G L+ LF+++ P
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 370 NVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLL 429
+TYNT+I+ F EAS FE M GV P+ +TY+ LIDG C + ++A L
Sbjct: 281 CAITYNTLIRG-FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 430 LEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGK 489
L M EK P Y +IN K A E+ +K+ Y +++
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 490 CGRLSDAVDLFNEMKKLR--CKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDI 547
G L +A L M K PDV +YNAL+ G+ + + A + + E D
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 548 NSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKD 607
+ NI+LN K+G +AME++ ++ S+I ++ +Y ++ + GM A L+
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 608 MNAKGFEYDQITYSSILEAVGK 629
M + Y+ +L ++ K
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCK 541
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 3/312 (0%)
Query: 320 AYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIK 379
A+G+ MLK G ++ N L+ L R A+ L +M P+V +YNTVI+
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 380 SLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFP 439
E K +A +MK +G S T+ ILID FCK ++++A L+EM+ G
Sbjct: 186 GFCEGK-ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 440 PCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDL 499
Y SLI G+ + LF E+ E A Y +I+ F K G+L +A ++
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 500 FNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAK 559
F M + +P+VYTY L+ G+ G +A LL M E P+ ++NII+N L K
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 560 SGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDM--NAKGFEYDQ 617
G A+EI M+ +PD ++YN +LG L G +EA++L+ M ++ + D
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 618 ITYSSILEAVGK 629
I+Y++++ + K
Sbjct: 425 ISYNALIHGLCK 436
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 206/435 (47%), Gaps = 7/435 (1%)
Query: 176 VNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYS 235
+++ ++F ++ R P A TYN++I + G ++ E++ M G P+ TY+
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG-VRPNVYTYT 321
Query: 236 ALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGK 295
LI +G+ A++L + M E +P A Y +++ K G V A+ +V+ MK +
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 296 GCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEG--CKPDIVLINNLINVLGRAGRLE 353
TY L+ GL G +++A L MLK+ PD++ N LI+ L + RL
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 354 DALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSIL 413
AL +++ + + VT N ++ S ++ ++A ++++ + ++ + TY+ +
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKA-GDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 414 IDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCG 473
IDGFCKT + A LL +M P Y L++ K + A LF E++
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 474 CSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYS 533
+ +MI K G + A L M + PD++TY+ L++ ++ G +D+A S
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAIS 620
Query: 534 LLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILG--C 591
+M + G PD + + +L G + E+ K+ +I D T++ C
Sbjct: 621 FFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Query: 592 LSRAGMFEEAARLMK 606
S A M + A RL++
Sbjct: 681 NSSANM-DLAKRLLR 694
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 172/362 (47%), Gaps = 3/362 (0%)
Query: 270 TTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLK 329
+ L+ Y ++ + A G++ M +G A VY + L+KGL R A L M +
Sbjct: 111 SGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRR 170
Query: 330 EGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPAS 389
PD+ N +I LE AL+L N+M+ C ++VT+ +I + F
Sbjct: 171 NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDA-FCKAGKMD 229
Query: 390 EASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLI 449
EA + ++MK G+ Y+ LI GFC +++ L +E+ E+G PC Y +LI
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289
Query: 450 NGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCK 509
G+ K + + A+E+F + E + Y +I G+ +A+ L N M + +
Sbjct: 290 RGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 510 PDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEI 569
P+ TYN +++ + + G++ DA ++ M++ PD ++NI+L GL G A ++
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 570 FTKM--QHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAV 627
M S PD +SYN ++ L + +A + + K D++T + +L +
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 628 GK 629
K
Sbjct: 470 LK 471
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 489 KCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDIN 548
+CG+ AV L EM++ PDV++YN ++ G ++ A L M+ GC +
Sbjct: 157 ECGK---AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLV 213
Query: 549 SHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDM 608
+ I+++ K+G AM +M+ ++ D V Y +++ G + L ++
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 609 NAKGFEYDQITYSSILEAVGKVDE 632
+G ITY++++ K+ +
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQ 297
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 245/525 (46%), Gaps = 37/525 (7%)
Query: 106 NVKIQFFKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSE 165
++ FF W+ +++ + HN Y++L+ L + + + ++ + M S +
Sbjct: 133 DIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANA 192
Query: 166 IVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG 225
++ GK MV + L ++ ++K +PT TYN ++ L+ + + ++ E+ G
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESG 251
Query: 226 NCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKA 285
PD VTY+ +I + K G+ A+ +M+ G + Y T++ + +
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 286 LGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINV 345
+ L QEM KG + + ++ +I GL + G++ + Y +F NM+++G KP++ + LI+
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 346 LGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLP 405
++G +EDA++L ++M KP+VVTY+ V+ L ++ EA +F + +G+
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN-GRVEEALDYFHTCRFDGLAI 430
Query: 406 SPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELF 465
+ YS LIDG K RV++A L EEM EKG Y +LI+ + K ++ + A LF
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 466 LELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRA 525
++E GC VYTY L+SGM +
Sbjct: 491 KRMEEEEGCDQT----------------------------------VYTYTILLSGMFKE 516
Query: 526 GMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSY 585
++A L M + G P + GL SG RA +I ++ + DA
Sbjct: 517 HRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACE 576
Query: 586 NTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKV 630
+ I L +AG +EA +L + +G E + ++ A+ KV
Sbjct: 577 DMI-NTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKV 620
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 157/296 (53%), Gaps = 4/296 (1%)
Query: 340 NNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMK 399
N LI G+ G +E+ L ++ KM+ +P + TYN ++ L S A FE M+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLV-SAMFVDSAERVFEVME 249
Query: 400 ANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYE 459
+ + P TY+ +I G+CK + +KA L +ME +G Y ++I +
Sbjct: 250 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG 309
Query: 460 AANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALM 519
+ L+ E+ E ++++I K G+L++ +F M + KP+V Y L+
Sbjct: 310 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Query: 520 SGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIK 579
G ++G ++DA LL RM ++G PD+ ++++++NGL K+G + A++ F + +
Sbjct: 370 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLA 429
Query: 580 PDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVG---KVDE 632
+++ Y++++ L +AG +EA RL ++M+ KG D Y+++++A KVDE
Sbjct: 430 INSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDE 485
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 145/302 (48%), Gaps = 18/302 (5%)
Query: 341 NLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAW-FEKMK 399
+L++VL A ++ + ++++ + V N +IKS K E W + KMK
Sbjct: 157 SLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSF--GKLGMVEELLWVWRKMK 214
Query: 400 ANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYE 459
NG+ P+ +TY+ L++G V+ A + E ME P Y ++I GY KA + +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 460 AANELFLELKEYCGCSSARVYAVMIK------HFGKCGRLSDAVDLFNEMKKLRCKPDVY 513
A E +++ + Y MI+ FG C V L+ EM + + +
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC------VALYQEMDEKGIQVPPH 328
Query: 514 TYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKM 573
++ ++ G+ + G +++ Y++ M G P++ + ++++G AKSG + A+ + +M
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 574 QHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK---V 630
KPD V+Y+ ++ L + G EEA G + + YSS+++ +GK V
Sbjct: 389 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRV 448
Query: 631 DE 632
DE
Sbjct: 449 DE 450
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 142/312 (45%), Gaps = 49/312 (15%)
Query: 366 QCKPNVVTYNTVIKSLFESKA-PASEASAWFEK-------MKAN-GVLPSPFTYSIL--- 413
+C P + + T ++ +F S + P E W E +K+N +LPSP+ IL
Sbjct: 38 KCSP-LSSSRTSVRWVFNSSSLPPPE---WIEPFNDVSDLVKSNRNLLPSPWVSQILNLL 93
Query: 414 ---------IDGFCK----------TNRVEKAHLLLEEME-----------EKGFPPCPA 443
+DGFC+ + V K+ + E+ + +K +
Sbjct: 94 DGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLE 153
Query: 444 AYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEM 503
Y SL++ AK + + E+K++ + +IK FGK G + + + ++ +M
Sbjct: 154 CYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKM 213
Query: 504 KKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGP 563
K+ +P +YTYN LM+G+V A +D A + ME PDI ++N ++ G K+G
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQT 273
Query: 564 KRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSI 623
++AME M+ + D ++Y T++ F L ++M+ KG + +S +
Sbjct: 274 QKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLV 333
Query: 624 LEAV---GKVDE 632
+ + GK++E
Sbjct: 334 IGGLCKEGKLNE 345
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 138/332 (41%), Gaps = 40/332 (12%)
Query: 339 INNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKM 398
++ ++N+L + +E L F + ++ PN V++ V+KS + P S +
Sbjct: 86 VSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSF--VLKSDEIREKPDIAWSFFCWSR 143
Query: 399 KANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRY 458
K + Y L+D V++ + E+++ FP +A +LI +GK
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMV 203
Query: 459 EAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNAL 518
E ++ ++KE + Y ++ + A +F M+ R KPD+ TYN +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263
Query: 519 MSGMVRAGMIDDAYSLLRRMEEDG--------------CVPDIN---------------- 548
+ G +AG A LR ME G C D +
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323
Query: 549 -----SHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAAR 603
+ ++++ GL K G +F M KP+ Y ++ +++G E+A R
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 604 LMKDMNAKGFEYDQITYSSILEAV---GKVDE 632
L+ M +GF+ D +TYS ++ + G+V+E
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 228/438 (52%), Gaps = 4/438 (0%)
Query: 176 VNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTV-TY 234
++ +L +F+ + + P+ ++ ++ + + Y+ + L+ +M G P + T
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG--IPHNLCTC 119
Query: 235 SALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKG 294
+ L++ F + + A+ +M + G +P+ + +L++ + + V AL + +M G
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 295 KGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLED 354
G V Y +I GL ++ +V++A L M K+G PD+V N+LI+ L +GR D
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 355 ALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILI 414
A ++ + M + P+V T+N +I + + + SEA ++E+M + P TYS+LI
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVK-EGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 415 DGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGC 474
G C +R+++A + M KG P Y LINGY K+K+ E +LF E+ +
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 475 SSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSL 534
+ Y ++I+ + + G+L+ A ++F M P++ TYN L+ G+ G I+ A +
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 535 LRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSR 594
L M+++G DI ++NII+ G+ K+G A +I+ + + PD +Y T++ L +
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478
Query: 595 AGMFEEAARLMKDMNAKG 612
G+ EA L + M G
Sbjct: 479 KGLRREADALFRKMKEDG 496
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 180/354 (50%), Gaps = 3/354 (0%)
Query: 229 PDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGL 288
P VT+ +L++ F + R A+ +FD+M G +P IY T++ K +V+ AL L
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 289 VQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGR 348
+ M+ G V TY LI GL +GR DA + M K PD+ N LI+ +
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 349 AGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPF 408
GR+ +A + + +M P++VTY+ +I L + EA F M + G P
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC-MYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 409 TYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLEL 468
TYSILI+G+CK+ +VE L EM ++G Y LI GY +A + A E+F +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 469 KEYCGCSSARV-YAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
+CG + Y V++ G++ A+ + +M+K D+ TYN ++ GM +AG
Sbjct: 388 V-FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPD 581
+ DA+ + + G +PDI ++ ++ GL K G + A +F KM+ I P+
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 202/402 (50%), Gaps = 1/402 (0%)
Query: 228 FPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALG 287
P +S L+SA K+ + I L+++M+ G+ L++ + + ++ AL
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 288 LVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLG 347
+ +M G ++ T+ L+ G R RV DA +F M+ G KP++V+ N +I+ L
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 348 RAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSP 407
++ ++++AL L N+ME P+VVTYN++I L S S+A+ M + P
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS-GRWSDATRMVSCMTKREIYPDV 256
Query: 408 FTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLE 467
FT++ LID K RV +A EEM + P Y LI G R + A E+F
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 468 LKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGM 527
+ Y+++I + K ++ + LF EM + + TY L+ G RAG
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 528 IDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT 587
++ A + RRM G P+I ++N++L+GL +G ++A+ I MQ + + D V+YN
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 588 ILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
I+ + +AG +A + +N +G D TY++++ + K
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 170/369 (46%), Gaps = 43/369 (11%)
Query: 304 YTELIKGLGRAGRVEDAYGLFMNMLKEGCKP--------------------DIVL----- 338
Y E+++ R +++D+ LF +M++ C+P D+V+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQ--CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106
Query: 339 ------------INNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKA 386
N L+N R +L AL KM L +P++VT+ +++ F
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG-FCRGD 165
Query: 387 PASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYC 446
+A F++M G P+ Y+ +IDG CK+ +V+ A LL ME+ G P Y
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 447 SLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKL 506
SLI+G + R+ A + + + + +I K GR+S+A + + EM +
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 507 RCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRA 566
PD+ TY+ L+ G+ +D+A + M GC PD+ +++I++NG KS +
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 567 MEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA 626
M++F +M + + V+Y ++ RAG A + + M G + ITY+ +L
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 627 V---GKVDE 632
+ GK+++
Sbjct: 406 LCDNGKIEK 414
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 148/312 (47%), Gaps = 8/312 (2%)
Query: 162 VLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEM 221
+ + I++ L K+K V+ AL + +++ P TYNS+I L G + + + M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 222 CNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLV---SIYFK 278
+ +PD T++ALI A K GR A ++EM L P Y+ L+ +Y +
Sbjct: 248 -TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 279 LGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVL 338
L E E+ G M KGC V TY+ LI G ++ +VE LF M + G + V
Sbjct: 307 LDEAEEMFGF---MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 339 INNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKM 398
LI RAG+L A ++F +M PN++TYN ++ L ++ +A M
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN-GKIEKALVILADM 422
Query: 399 KANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRY 458
+ NG+ TY+I+I G CK V A + + +G P Y +++ G K
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 459 EAANELFLELKE 470
A+ LF ++KE
Sbjct: 483 READALFRKMKE 494
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 102/253 (40%), Gaps = 36/253 (14%)
Query: 118 RRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVN 177
RR+ + + TY LI L + + MV C S ++N K+K V
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 178 KALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSAL 237
+ +F ++ R +TVTY+ L
Sbjct: 344 HGMKLFCEMSQR------------------------------------GVVRNTVTYTIL 367
Query: 238 ISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGC 297
I + + G+ A +F M G+ P Y L+ G++EKAL ++ +M+ G
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 298 ALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALK 357
+ TY +I+G+ +AG V DA+ ++ ++ +G PDI ++ L + G +A
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADA 487
Query: 358 LFNKMEALQCKPN 370
LF KM+ PN
Sbjct: 488 LFRKMKEDGILPN 500
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/596 (25%), Positives = 263/596 (44%), Gaps = 78/596 (13%)
Query: 119 RNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNK 178
++ + + TY L+ L + + + + + +M+ + +S +V L K + +
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE 350
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
AL++ ++ P YN++I L + + + L++ M G P+ VTYS LI
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG-LRPNDVTYSILI 409
Query: 239 SAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCA 298
F + G+ +A+ EM + GL+ + Y +L++ + K G++ A G + EM K
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 299 LTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKL 358
TV TYT L+ G G++ A L+ M +G P I L++ L RAG + DA+KL
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 359 FNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG-- 416
FN+M KPN VTYN +I+ E + S+A + ++M G++P ++Y LI G
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCE-EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 417 ---------------------------------FCKTNRVEKAHLLLEEMEEKGFPPCPA 443
FC+ ++E+A + +EM ++G
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 444 AYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEM 503
Y LI+G K K + L E+ + +Y MI K G +A +++ M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 504 KKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPD----------------- 546
C P+ TY A+++G+ +AG +++A L +M+ VP+
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768
Query: 547 ----INSHNIILNGL--------------AKSGGPKRAMEIFTKMQHSEIKPDAVSYNTI 588
+ HN IL GL + G + A E+ T+M + PD ++Y T+
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 589 LGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEA------VGKVDEDRNPTL 638
+ L R ++A L M KG D++ Y++++ +GK E RN L
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/625 (24%), Positives = 269/625 (43%), Gaps = 67/625 (10%)
Query: 63 DERFIRILK-IFKWGPDAEKAL--EVLKMRVDHRLVHQVL--NIDVEINVKIQFFKWAGR 117
D++F+ +K I + E AL E++ R+ V ++L ID + + ++FF + G
Sbjct: 38 DKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTID-DPKLGLRFFNFLGL 96
Query: 118 RRNFEHNSTTYMALIRCLDETRMIGVMWKS------------------------------ 147
R F+H++ ++ LI L + + W +
Sbjct: 97 HRGFDHSTASFCILIHALVKANL---FWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKL 153
Query: 148 ---------IQDMVRSTCVMG---------------PSV--LSEIVNILGKAKMVNKALS 181
IQ VRS V+ P V LS +++ L K + A+
Sbjct: 154 SSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAME 213
Query: 182 IFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAF 241
+F + S +P Y +I L + + E+ M G C + V Y+ LI
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG-CDVNIVPYNVLIDGL 272
Query: 242 GKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTV 301
K + A+ + ++ L+P Y TLV K+ E E L ++ EM + +
Sbjct: 273 CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE 332
Query: 302 YTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNK 361
+ L++GL + G++E+A L ++ G P++ + N LI+ L + + +A LF++
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 362 MEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTN 421
M + +PN VTY+ +I +F + A ++ +M G+ S + Y+ LI+G CK
Sbjct: 393 MGKIGLRPNDVTYSILI-DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451
Query: 422 RVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYA 481
+ A + EM K P Y SL+ GY + A L+ E+ S +
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 482 VMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEED 541
++ + G + DAV LFNEM + KP+ TYN ++ G G + A+ L+ M E
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 542 GCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEA 601
G VPD S+ +++GL +G A + + + + Y +L R G EEA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 602 ARLMKDMNAKGFEYDQITYSSILEA 626
+ ++M +G + D + Y +++
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDG 656
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 141/528 (26%), Positives = 231/528 (43%), Gaps = 84/528 (15%)
Query: 162 VLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEM 221
V + +++ L K + ++A +F ++ +P TY+ +I M + G + EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 222 CNEG---NCFPDTVTYSALISAFGKLGRDISAIRLF-DEMKENGLQPTAKIYTTLVSIYF 277
+ G + +P Y++LI+ K G DISA F EM L+PT YT+L+ Y
Sbjct: 429 VDTGLKLSVYP----YNSLINGHCKFG-DISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 278 KLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIV 337
G++ KAL L EM GKG A ++YT+T L+ GL RAG + DA LF M + KP+ V
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 338 LINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEK 397
N +I G + A + +M P+ +Y +I L + ASEA + +
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT-GQASEAKVFVDG 602
Query: 398 MKANGVLPSPFTYSILIDGFCKTNRVEKA------------------------------- 426
+ + Y+ L+ GFC+ ++E+A
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 427 ----HLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELF-LELKEYCGCSSARV-Y 480
LL+EM ++G P Y S+I+ K ++ A ++ L + E GC V Y
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE--GCVPNEVTY 720
Query: 481 AVMIKHFGKCGRLSDAVDLFNEMKKLRCKPD----------------------------- 511
+I K G +++A L ++M+ + P+
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 512 ------VYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKR 565
TYN L+ G R G I++A L+ RM DG PD ++ ++N L + K+
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 566 AMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGF 613
A+E++ M I+PD V+YNT++ AG +A L +M +G
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 185/411 (45%), Gaps = 12/411 (2%)
Query: 176 VNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYS 235
+NKAL +++++ + P+ T+ +++ L + G +L+NEM E N P+ VTY+
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYN 546
Query: 236 ALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGK 295
+I + + G A EM E G+ P Y L+ G+ +A V +
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 296 GCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDA 355
C L YT L+ G R G++E+A + M++ G D+V LI+ + +
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF 666
Query: 356 LKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILID 415
L +M KP+ V Y ++I + ++ EA ++ M G +P+ TY+ +I+
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKT-GDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 416 GFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKA-----KRYEAANELFLELKE 470
G CK V +A +L +M+ P Y ++ K K E N + L
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL-- 783
Query: 471 YCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDD 530
++ Y ++I+ F + GR+ +A +L M PD TY +++ + R +
Sbjct: 784 ---LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 531 AYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPD 581
A L M E G PD ++N +++G +G +A E+ +M + P+
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 482 VMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEED 541
V +HFG A++LFN+M + +PDVY Y ++ + + A ++ ME
Sbjct: 203 VKFRHFGL------AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEAT 256
Query: 542 GCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEA 601
GC +I +N++++GL K A+ I + ++KPD V+Y T++ L + FE
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIG 316
Query: 602 ARLMKDMNAKGFEYDQITYSSILEAV---GKVDEDRN 635
+M +M F + SS++E + GK++E N
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALN 353
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 100/242 (41%), Gaps = 36/242 (14%)
Query: 180 LSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALIS 239
+ ++ R KP Y SMI + G +++ +++ M NEG C P+ VTY+A+I+
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG-CVPNEVTYTAVIN 725
Query: 240 AFGKLGRDISAIRLFDEMKE-----------------------------------NGLQP 264
K G A L +M+ GL
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 265 TAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLF 324
Y L+ + + G +E+A L+ M G G + TYT +I L R V+ A L+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 325 MNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFES 384
+M ++G +PD V N LI+ AG + A +L N+M PN T T + S
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSS 905
Query: 385 KA 386
K+
Sbjct: 906 KS 907
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 435 EKGFPPCPAAYCSLINGYGKAKRYEAANE-----------------LFLELKEYCGCSSA 477
+GF A++C LI+ KA + A+ + E C SS+
Sbjct: 97 HRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSS 156
Query: 478 RVYAVMIKHFGKCGRLSDAVDLFNEM-KKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
+ ++I+H+ + R+ D V +F M K+ P+V T +AL+ G+V+ A L
Sbjct: 157 SSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFN 216
Query: 537 RMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAG 596
M G PD+ + ++ L + RA E+ M+ + + V YN ++ L +
Sbjct: 217 DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276
Query: 597 MFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDE 632
EA + KD+ K + D +TY +++ + KV E
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
Query: 410 YSILIDGFCKTNRVEKAHLLLEEMEEK-GFPPCPAAYCSLINGYGKAKRYEAANELFLEL 468
+ +LI + ++ RV L+ + M K P +L++G K + + A ELF ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 469 KEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMI 528
+Y +I+ + LS A ++ M+ C ++ YN L+ G+ + +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 529 DDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTI 588
+A + + + PD+ ++ ++ GL K + +E+ +M P + +++
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 589 LGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
+ L + G EEA L+K + G + Y+++++++ K
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/557 (24%), Positives = 251/557 (45%), Gaps = 38/557 (6%)
Query: 109 IQFFKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTC-VMGPSVLSEIV 167
++ F + F+H +TY ++I L M + + DM + M V +
Sbjct: 24 LEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAM 83
Query: 168 NILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNC 227
G+ V +A+++F ++ C+PT +YN+++ +L+ GY+++ H++Y M + G
Sbjct: 84 KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG-I 142
Query: 228 FPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYF---------- 277
PD +++ + +F K R +A+RL + M G + Y T+V ++
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 278 -------------------------KLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLG 312
K G+V++ L+ ++ +G ++TY I+GL
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 313 RAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVV 372
+ G ++ A + ++++G KPD++ NNLI L + + ++A KM +P+
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 373 TYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEE 432
TYNT+I + A NG +P FTY LIDG C +A L E
Sbjct: 323 TYNTLIAG-YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 433 MEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGR 492
KG P Y +LI G A +L E+ E + + +++ K G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 493 LSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNI 552
+SDA L M PD++T+N L+ G +++A +L M ++G PD+ ++N
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 553 ILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKG 612
+LNGL K+ + ME + M P+ ++N +L L R +EA L+++M K
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 613 FEYDQITYSSILEAVGK 629
D +T+ ++++ K
Sbjct: 562 VNPDAVTFGTLIDGFCK 578
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 222/493 (45%), Gaps = 3/493 (0%)
Query: 122 EHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALS 181
E N Y ++ E ++ M+ S + S ++++ +L K V +
Sbjct: 178 EMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEK 237
Query: 182 IFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAF 241
+ ++ R P TYN I L Q G + + + +G PD +TY+ LI
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP-KPDVITYNNLIYGL 296
Query: 242 GKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTV 301
K + A +M GL+P + Y TL++ Y K G V+ A +V + G
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 302 YTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNK 361
+TY LI GL G A LF L +G KP+++L N LI L G + +A +L N+
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 362 MEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTN 421
M P V T+N ++ L + S+A + M + G P FT++ILI G+
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGC-VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 422 RVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYA 481
++E A +L+ M + G P Y SL+NG K ++E E + + E + +
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 482 VMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEED 541
++++ + +L +A+ L EMK PD T+ L+ G + G +D AY+L R+MEE
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 542 GCVPDIN-SHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEE 600
V ++NII++ + A ++F +M + PD +Y ++ + G
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655
Query: 601 AARLMKDMNAKGF 613
+ + +M GF
Sbjct: 656 GYKFLLEMMENGF 668
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 201/417 (48%), Gaps = 16/417 (3%)
Query: 173 AKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTV 232
KMVN+ L +P + TYN++I + G + + + G PD
Sbjct: 310 GKMVNEGL-----------EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG-FVPDQF 357
Query: 233 TYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEM 292
TY +LI G A+ LF+E G++P +Y TL+ G + +A L EM
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 293 KGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRL 352
KG V T+ L+ GL + G V DA GL M+ +G PDI N LI+ ++
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 353 EDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSI 412
E+AL++ + M P+V TYN+++ L ++ + + ++ M G P+ FT++I
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKT-SKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 413 LIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKE-Y 471
L++ C+ ++++A LLEEM+ K P + +LI+G+ K + A LF +++E Y
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 472 CGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDA 531
SS Y ++I F + ++ A LF EM PD YTY ++ G + G ++
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 532 YSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTI 588
Y L M E+G +P + + ++N L A I +M + P+AV NTI
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTI 711
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 197/419 (47%), Gaps = 2/419 (0%)
Query: 213 KIHELYNEMCNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKEN-GLQPTAKIYTT 271
K E++N M E TY ++I G G+ + + +M+EN G +Y
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 272 LVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEG 331
+ Y + G+V++A+ + + M C TV++Y ++ L +G + A+ ++M M G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 332 CKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEA 391
PD+ + + R AL+L N M + C+ NVV Y TV+ +E A E
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA-EG 200
Query: 392 SAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLING 451
F KM A+GV T++ L+ CK V++ LL+++ ++G P Y I G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 452 YGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPD 511
+ + A + L E Y +I K + +A +M +PD
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 512 VYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFT 571
YTYN L++G + GM+ A ++ +G VPD ++ +++GL G RA+ +F
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 572 KMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKV 630
+ IKP+ + YNT++ LS GM EAA+L +M+ KG + T++ ++ + K+
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 171/386 (44%), Gaps = 39/386 (10%)
Query: 114 WAGRRRN--FEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILG 171
+ G+ N E +S TY LI + M+ + + + D V + V +++ L
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 172 KAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEG------ 225
N+AL++F + + KP YN++I L +G + +L NEM +G
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 226 ------------NC----------------FPDTVTYSALISAFGKLGRDISAIRLFDEM 257
C FPD T++ LI + + +A+ + D M
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 258 KENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRV 317
+NG+ P Y +L++ K + E + + M KGCA ++T+ L++ L R ++
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 318 EDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKME-ALQCKPNVVTYNT 376
++A GL M + PD V LI+ + G L+ A LF KME A + + TYN
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNI 607
Query: 377 VIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEK 436
+I + F K + A F++M + P +TY +++DGFCKT V + L EM E
Sbjct: 608 IIHA-FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 437 GFPPCPAAYCSLINGYGKAKR-YEAA 461
GF P +IN R YEAA
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAA 692
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 418 CKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSA 477
C+ + ++ + +E GF + Y S+I G ++EA E+ ++++E G
Sbjct: 16 CQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHML 75
Query: 478 R-VYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
VY +K++G+ G++ +AV++F M C+P V++YNA+MS +V +G D A+ +
Sbjct: 76 EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYM 135
Query: 537 RMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAG 596
RM + G PD+ S I + K+ P A+ + M + + V+Y T++G
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
Query: 597 MFEEAARLMKDMNAKGFEYDQITYSSILEAVGK 629
E L M A G T++ +L + K
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%)
Query: 127 TYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQI 186
TY +L+ L +T + ++ + MV C + ++ L + + +++AL + ++
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 187 KSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLGR 246
K++ P A T+ ++I + G + + L+ +M T TY+ +I AF +
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 247 DISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTE 306
A +LF EM + L P Y +V + K G V + EM G ++ T
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677
Query: 307 LIKGLGRAGRVEDAYGLFMNMLKEGCKPDIV 337
+I L RV +A G+ M+++G P+ V
Sbjct: 678 VINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 223/448 (49%), Gaps = 2/448 (0%)
Query: 177 NKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSA 236
+ A S+F ++ + P+ + ++ ++ + ++ + LY++M N G D +++
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLG-ISHDLYSFTI 119
Query: 237 LISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKG 296
LI F + R A+ L +M + G +P+ +L++ + + ++A+ LV M G G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 297 CALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDAL 356
V Y +I GL + + +A +F M K+G + D V N LI+ L +GR DA
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 357 KLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDG 416
+L M + PNV+ + +I + F + EA +++M V+P+ FTY+ LI+G
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDT-FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 417 FCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSS 476
FC + A + + M KG P Y +LI G+ K+KR E +LF E+
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 477 ARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLR 536
A Y +I + + G+L+ A +FN M PD+ TYN L+ + G I+ A ++
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 537 RMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAG 596
+++ DI ++NII+ GL ++ K A +F + +KPDA++Y T++ L R G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 597 MFEEAARLMKDMNAKGFEYDQITYSSIL 624
+ EA +L + M GF + Y L
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 192/383 (50%), Gaps = 1/383 (0%)
Query: 250 AIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYTELIK 309
A LF EM ++ P+ +T ++++ K+ + + + L +M+ G + +Y++T LI
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 310 GLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEALQCKP 369
R R+ A L M+K G +P IV + +L+N + R ++A+ L + M+ P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 370 NVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEKAHLL 429
NVV YNTVI L +++ + A F M+ G+ TY+ LI G + R A L
Sbjct: 183 NVVIYNTVINGLCKNR-DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 430 LEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIKHFGK 489
L +M ++ P + +LI+ + K A L+ E+ + Y +I F
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 490 CGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINS 549
G L DA +F+ M C PDV TYN L++G ++ ++D L M G V D +
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 550 HNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMN 609
+N +++G ++G A ++F +M + PD V+YN +L CL G E+A +++D+
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 610 AKGFEYDQITYSSILEAVGKVDE 632
+ D ITY+ I++ + + D+
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDK 444
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 157/319 (49%), Gaps = 2/319 (0%)
Query: 162 VLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEM 221
+ + ++N L K + +N AL +FY ++ + + A TYN++I L G + L +M
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 222 CNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGE 281
P+ + ++ALI F K G + A L+ EM + P Y +L++ + G
Sbjct: 246 VKR-KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 282 VEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINN 341
+ A + M KGC V TY LI G ++ RVED LF M +G D N
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 342 LINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKAN 401
LI+ +AG+L A K+FN+M P++VTYN ++ L + +A E ++ +
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN-GKIEKALVMVEDLQKS 423
Query: 402 GVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAA 461
+ TY+I+I G C+T+++++A L + KG P AY ++I+G + A
Sbjct: 424 EMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 483
Query: 462 NELFLELKEYCGCSSARVY 480
++L +KE S R+Y
Sbjct: 484 DKLCRRMKEDGFMPSERIY 502
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 160/325 (49%), Gaps = 1/325 (0%)
Query: 302 YTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNK 361
+ Y E ++ + +DA+ LF ML+ P IV ++ V+ + + + + L++K
Sbjct: 45 HHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHK 104
Query: 362 MEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTN 421
ME L ++ ++ T++ F + S A A KM G PS T L++GFC+ N
Sbjct: 105 MENLGISHDLYSF-TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN 163
Query: 422 RVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYA 481
R ++A L++ M+ GF P Y ++ING K + A E+F +++ + A Y
Sbjct: 164 RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
Query: 482 VMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEED 541
+I GR +DA L +M K + P+V + AL+ V+ G + +A +L + M
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 542 GCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEA 601
VP++ ++N ++NG G A +F M PD V+YNT++ ++ E+
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 602 ARLMKDMNAKGFEYDQITYSSILEA 626
+L +M +G D TY++++
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHG 368
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 147/309 (47%), Gaps = 7/309 (2%)
Query: 104 EINVKIQFFKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVL 163
++N ++ F + ++ ++ TY LI L + + ++DMV+ + P+V+
Sbjct: 199 DLNNALEVF-YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK--IDPNVI 255
Query: 164 --SEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEM 221
+ +++ K + +A +++ ++ R P TYNS+I G +++ M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 222 CNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGE 281
++G CFPD VTY+ LI+ F K R ++LF EM GL A Y TL+ Y + G+
Sbjct: 316 VSKG-CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 282 VEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINN 341
+ A + M G + + TY L+ L G++E A + ++ K DI+ N
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 342 LINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKAN 401
+I L R +L++A LF + KP+ + Y T+I L K EA +MK +
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR-KGLQREADKLCRRMKED 493
Query: 402 GVLPSPFTY 410
G +PS Y
Sbjct: 494 GFMPSERIY 502
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 115/217 (52%), Gaps = 3/217 (1%)
Query: 422 RVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYA 481
+ + A L EM + P + ++ K +++ L+ +++ +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 482 VMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEED 541
++I F +C RLS A+ L +M KL +P + T +L++G + +A SL+ M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 542 GCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEA 601
G VP++ +N ++NGL K+ A+E+F M+ I+ DAV+YNT++ LS +G + +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 602 ARLMKDMNAKGFEYDQITYSSILEAV---GKVDEDRN 635
ARL++DM + + + I ++++++ G + E RN
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 275
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 146/520 (28%), Positives = 240/520 (46%), Gaps = 14/520 (2%)
Query: 112 FKWAGRRRNFEHNSTTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILG 171
FK R E TY L++ L + IG + +++M + V + +++
Sbjct: 330 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 389
Query: 172 KAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDT 231
+A +NKA+ I + S+ T++TYN++I + G + L EM + G
Sbjct: 390 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 449
Query: 232 VTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQE 291
S + L D SA+R EM + P + TTL+S K G+ KAL L +
Sbjct: 450 SFTSVICLLCSHLMFD-SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 508
Query: 292 MKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGR 351
KG + T L+ GL AG++++A+ + +L GC D V N LI+ +
Sbjct: 509 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 568
Query: 352 LEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYS 411
L++A ++M KP+ TY+ +I LF EA +++ K NG+LP +TYS
Sbjct: 569 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN-KVEEAIQFWDDCKRNGMLPDVYTYS 627
Query: 412 ILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEY 471
++IDG CK R E+ +EM K P Y LI Y ++ R A EL ++K
Sbjct: 628 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 687
Query: 472 CGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDA 531
++ Y +IK R+ +A LF EM+ +P+V+ Y AL+ G + G +
Sbjct: 688 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 747
Query: 532 YSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNT-ILG 590
LLR M P+ ++ +++ G A+ G A + +M+ I PD+++Y I G
Sbjct: 748 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 807
Query: 591 CLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKV 630
L + G+ E KG D+ Y++I+E K+
Sbjct: 808 YLKQGGVLEA---------FKG--SDEENYAAIIEGWNKL 836
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 234/496 (47%), Gaps = 45/496 (9%)
Query: 179 ALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALI 238
AL +F + ++ P+ T N ++ L++ ++K E ++ +C PD ++ I
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK--GVSPDVYLFTTAI 280
Query: 239 SAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCA 298
+AF K G+ A++LF +M+E G+ P + T++ G ++A ++M +G
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 340
Query: 299 LTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKL 358
T+ TY+ L+KGL RA R+ DAY + M K+G P++++ NNLI+ AG L A+++
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 400
Query: 359 FNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFC 418
+ M + TYNT+IK + A A ++M + G + +++ +I C
Sbjct: 401 KDLMVSKGLSLTSSTYNTLIKG-YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459
Query: 419 KTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLE----------- 467
+ A + EM + P +LI+G K ++ A EL+ +
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 519
Query: 468 -----LKEYC------------------GCSSARV-YAVMIKHFGKCG--RLSDAVDLFN 501
L C GC RV Y +I G CG +L +A +
Sbjct: 520 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS--GCCGKKKLDEAFMFLD 577
Query: 502 EMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSG 561
EM K KPD YTY+ L+ G+ +++A + +G +PD+ +++++++G K+
Sbjct: 578 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 637
Query: 562 GPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYS 621
+ E F +M ++P+ V YN ++ R+G A L +DM KG + TY+
Sbjct: 638 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 697
Query: 622 SILEA---VGKVDEDR 634
S+++ + +V+E +
Sbjct: 698 SLIKGMSIISRVEEAK 713
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 214/471 (45%), Gaps = 2/471 (0%)
Query: 162 VLSEIVNILGKAKMVNKALSIFYQIKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEM 221
+ + +N K V +A+ +F +++ P T+N++I L G Y++ +M
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334
Query: 222 CNEGNCFPDTVTYSALISAFGKLGRDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGE 281
G P +TYS L+ + R A + EM + G P +Y L+ + + G
Sbjct: 335 VERG-MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 282 VEKALGLVQEMKGKGCALTVYTYTELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINN 341
+ KA+ + M KG +LT TY LIKG + G+ ++A L ML G + +
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 342 LINVLGRAGRLEDALKLFNKMEALQCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKAN 401
+I +L + AL+ +M P T+I L + + WF+ +
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN-K 512
Query: 402 GVLPSPFTYSILIDGFCKTNRVEKAHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAA 461
G + T + L+ G C+ ++++A + +E+ +G +Y +LI+G K+ + A
Sbjct: 513 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 572
Query: 462 NELFLELKEYCGCSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSG 521
E+ + Y+++I ++ +A+ +++ K+ PDVYTY+ ++ G
Sbjct: 573 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632
Query: 522 MVRAGMIDDAYSLLRRMEEDGCVPDINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPD 581
+A ++ M P+ +N ++ +SG A+E+ M+H I P+
Sbjct: 633 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 692
Query: 582 AVSYNTILGCLSRAGMFEEAARLMKDMNAKGFEYDQITYSSILEAVGKVDE 632
+ +Y +++ +S EEA L ++M +G E + Y+++++ GK+ +
Sbjct: 693 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 743
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 226,968,223
Number of Sequences: 539616
Number of extensions: 9359229
Number of successful extensions: 36459
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 21779
Number of HSP's gapped (non-prelim): 3342
length of query: 638
length of database: 191,569,459
effective HSP length: 124
effective length of query: 514
effective length of database: 124,657,075
effective search space: 64073736550
effective search space used: 64073736550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)